>gnl|CDD|130252 TIGR01184, ntrCD, nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase. Length = 230

Score = 82.9 bits (205), Expect = 2e-16 Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 20/209 (9%) Query: 369 LSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSLRER 428 L G+NL + G+ +L+G SG GKST++NL+ + P+SG + ++G + IT +R Sbjct: 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEG---KQITEPG-PDR 56 Query: 429 ISYVGQDVFLFS-NTVRYNILIG----RPMATEEEMIEIAKSANAHDFIMSLPQGYDTYV 483 + V Q+ L TVR NI + P ++ E I + H ++ L + D Sbjct: 57 M-VVFQNYSLLPWLTVRENIALAVDRVLPDLSKSERRAIVEE---HIALVGLTEAADKRP 112 Query: 484 GENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQALSRLMQ--GRTT 541 G+ LSGG KQR+AIARA+ +L+LDE ALD T +++ L ++ + T Sbjct: 113 GQ----LSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTV 168 Query: 542 IVIAHRI-STIIEADHIIFIEDGKVSESG 569 +++ H + ++ +D ++ + +G + G Sbjct: 169 LMVTHDVDEALLLSDRVVMLTNGPAANIG 197

RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR01184