>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382

Score = 72.1 bits (177), Expect = 4e-13 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 31/218 (14%) Query: 371 GINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEI-DGINIRDI------TFS 423 +L + G++ L+G SGSGKS+++ + + S GS+ + DG D+ T Sbjct: 42 NASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLR 101 Query: 424 SLR-ERISYVGQDVFLFS-NTVRYNILIGRPMATEEEMIEIAKSANAHDFIMSLPQGYDT 481 LR R+S V Q L TV N+ G M E E K + ++ L Q D Sbjct: 102 RLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEA-ERRKRVDEQLELVGLAQWADK 160 Query: 482 YVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQALS-RLMQ--- 537 GE LSGG +QR+ +ARA D IL++DE SALD L+R L L++ Sbjct: 161 KPGE----LSGGMQQRVGLARAFAMDADILLMDEPFSALDP----LIRTQLQDELLELQA 212 Query: 538 --GRTTIVIAHRISTIIEA----DHIIFIEDGKVSESG 569 +T I ++H + EA + I +E G++ + G Sbjct: 213 KLNKTIIFVSHDLD---EALKIGNRIAIMEGGRIIQHG 247

RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR03415