RPSBLAST alignment for GI: 254780917 and conserved domain: TIGR03797
>gnl|CDD|163509 TIGR03797, NHPM_micro_ABC2, NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif. Length = 686
Score = 183 bits (466), Expect = 1e-46
Identities = 137/479 (28%), Positives = 228/479 (47%), Gaps = 42/479 (8%)
Query: 109 QRKIYRRLLQYGMEFYDSNQSSELQVRFTHATQSVRSVVDIFITSFLRDFLTLVGLIVVM 168
Q ++ RLL+ + F+ + +L R +Q R + +T+ L L+ L +M
Sbjct: 212 QAAVWDRLLRLPVSFFRQYSTGDLASRAMGISQIRRILSGSTLTTLLSGIFALLNL-GLM 270
Query: 169 FLQEPTLSL-----CTIIIGPLCILGVRILVKRVRHIME-QGMVAIGHIIQNLQETVIGI 222
F L+L + I +LG+ V++ R ++E G I + L + +
Sbjct: 271 FYYSWKLALVAVALALVAIAVTLVLGLL-QVRKERRLLELSG--KISGLTVQLINGISKL 327
Query: 223 RI----VKSFA--MEEVMNQRMCNMIKEVEDRLNKVAKIESATSPIMETISGLSIAGIIL 276
R+ ++FA + QR + +IE+ + + L+ A +
Sbjct: 328 RVAGAENRAFARWAKLFSRQRKLEL---------SAQRIENLLTVFNAVLPVLTSAALFA 378
Query: 277 FSGFLMSKKGTSNAGEIMSFITALLMAYEPAKRIARTRIILEGGMVGVRCMFSLLDHPIM 336
+ L+ G S G ++F TA +++ ++ + + L +
Sbjct: 379 AAISLLGGAGLS-LGSFLAFNTAFGSFSGAVTQLS-------NTLISILAVIPLWERAKP 430
Query: 337 IEESPHAVNL---PVGK--GTTVFRDVFFSYKQ-GHPVLSGINLCFKSGKMTALVGPSGS 390
I E+ V+ GK G V F Y+ G +L ++L + G+ A+VGPSGS
Sbjct: 431 ILEALPEVDEAKTDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGS 490
Query: 391 GKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSLRERISYVGQDVFLFSNTVRYNILIG 450
GKST++ LL+ P SGS+ DG ++ + ++R ++ V Q+ L S ++ NI G
Sbjct: 491 GKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGG 550
Query: 451 RPMATEEEMIEIAKSANAHDFIMSLPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHI 510
P+ +E E A+ A + I ++P G T + E G LSGGQ+QR+ IARA++R I
Sbjct: 551 APLTLDEAW-EAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRI 609
Query: 511 LVLDEATSALDTHTENLVRQALSRLMQGRTTIVIAHRISTIIEADHIIFIEDGKVSESG 569
L+ DEATSALD T+ +V ++L RL T IVIAHR+STI AD I ++ G+V + G
Sbjct: 610 LLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQG 666