RPSBLAST alignment for GI: 254780917 and conserved domain: COG4988

>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559

 Score =  294 bits (753), Expect = 7e-80
 Identities = 140/561 (24%), Positives = 280/561 (49%), Gaps = 12/561 (2%)

Query: 37  MSIVAMITV--SLMTSCSAWIMRDVMNAMVASTDIFHVIVVSSTVAGIFIVKGIASFVQN 94
           + I A++ V   +     A ++ D++  ++       ++ +   +    +++   ++++ 
Sbjct: 2   LVISALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRE 61

Query: 95  YYLSCAGNSIIAEQQRKIYRRLLQYGMEFYDSNQSSELQVRFTHATQSVRSVVDIFITSF 154
                A   + A  ++ +  +L + G  F     +           + +      ++   
Sbjct: 62  RLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQM 121

Query: 155 LRDFLTLVGLIVVMFLQEPTLSLCTIIIGPLCILGVRILVKRVRHIMEQGMVAIGHIIQN 214
               +  + +++ +F      +L  +I  PL  L + ++    +   E+   A+  +  +
Sbjct: 122 FLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSGH 181

Query: 215 LQETVIGIRIVKSFAMEEVMNQRMCNMIKEVEDRLNKVAKIESATSPIMETISGLSIAGI 274
             + + G+  +++F   E   +R+    ++       V +I   +S ++E  + LSIA +
Sbjct: 182 FLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALV 241

Query: 275 ILFSGFLMSKKGTSNAGEIMSFITALLMA---YEPAKRIARTRIILEGGMVGVRCMFSLL 331
            ++ GF +  +G      + + +  L++A   ++P + +         G      +F+LL
Sbjct: 242 AVYIGFRLLGEGDLT---LFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLL 298

Query: 332 DHPIMIEESPHAVNLPVGKGTTV-FRDVFFSYKQGHPVLSGINLCFKSGKMTALVGPSGS 390
           + P+    S     +       +   ++ F Y  G P LS +NL  K+G++TALVG SG+
Sbjct: 299 ESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGA 358

Query: 391 GKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSLRERISYVGQDVFLFSNTVRYNILIG 450
           GKST++NLL+    P+ G I ++GI++RD++  + R++IS+V Q+ +LF+ T+R NIL+ 
Sbjct: 359 GKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLA 418

Query: 451 RPMATEEEMIEIAKSANAHDFIMSLPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHI 510
           RP A++EE+I     A   +F+   P G DT +GE G+ LSGGQ QR+A+ARA+L    +
Sbjct: 419 RPDASDEEIIAALDQAGLLEFV-PKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASL 477

Query: 511 LVLDEATSALDTHTENLVRQALSRLMQGRTTIVIAHRISTIIEADHIIFIEDGKVSESGD 570
           L+LDE T+ LD  TE ++ QAL  L + +T +VI HR+    +AD I+ +++G++ E G 
Sbjct: 478 LLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGT 537

Query: 571 QKYLLQQKDGSLYKKMYASQL 591
            + L +++   LY  +   Q 
Sbjct: 538 HEELSEKQ--GLYANLLKQQE 556