RPSBLAST alignment for GI: 254780917 and conserved domain: cd03218
>gnl|CDD|72977 cd03218, ABC_YhbG, The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.. Length = 232
Score = 87.1 bits (216), Expect = 1e-17
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 361 SYKQGHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDI 420
Y V++G++L K G++ L+GP+G+GK+T +++ + P SG I +DG +DI
Sbjct: 9 RYG-KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDG---QDI 64
Query: 421 TFSSLRER----ISYVGQDVFLFSN-TVRYNILIGRPMATEEEMIEIAKSANA-HDF-IM 473
T + +R I Y+ Q+ +F TV NIL + + K +F I
Sbjct: 65 TKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT 124
Query: 474 SLPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQALS 533
L + S+LSGG+++R+ IARA+ + L+LDE + +D +++ +
Sbjct: 125 HLRK-------SKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIK 177
Query: 534 RLMQGRTTIVIA-HRISTIIE-ADHIIFIEDGKVSESGDQKYLLQQKD 579
L ++I H + + D I +GKV G + + +
Sbjct: 178 ILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAANEL 225