RPSBLAST alignment for GI: 254780917 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 80.2 bits (198), Expect = 2e-15
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 30/212 (14%)
Query: 366 HPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSL 425
L ++ G+ L+G +G+GKST++ LL +Y P SG++ + G
Sbjct: 35 FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRG----------- 83
Query: 426 RERISY-----VGQDVFLFSNTVRYNI-LIGRPMATEEEMIEIAKSANAHDFIMSLPQGY 479
R+S G F T R NI L GR + + I+ K +F L
Sbjct: 84 --RVSSLLGLGGG---FNPELTGRENIYLNGRLLGLSRKEID-EKIDEIIEF-SELGDFI 136
Query: 480 DTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQAL-SRLMQG 538
D V S G K R+A A A + IL++DE + D + ++ L L QG
Sbjct: 137 DLPV----KTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQG 192
Query: 539 RTTIVIAHRISTIIE-ADHIIFIEDGKVSESG 569
+T I+++H S+I D + +E GK+ G
Sbjct: 193 KTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224