RPSBLAST alignment for GI: 254780917 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 75.2 bits (185), Expect = 5e-14
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 48/208 (23%)
Query: 355 FRDVFFSYKQGHPVLSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDG 414
++ + G +L ++ K G + GPSG+GKS++ L ++ SG I +
Sbjct: 3 LENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPE 62
Query: 415 INIRDITFSSLRERISYVGQDVFLFSNTVRYNILIGRPMATEEEMIEIAKSANAHDFIMS 474
E + ++ Q +L T+R ++ P
Sbjct: 63 -----------GEDLLFLPQRPYLPLGTLREQLI--YPW--------------------- 88
Query: 475 LPQGYDTYVGENGSNLSGGQKQRIAIARAMLRDGHILVLDEATSALDTHTENLVRQALSR 534
LSGG++QR+A AR +L + LDEATSALD +E+ + Q L
Sbjct: 89 ------------DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKE 136
Query: 535 LMQGRTTIVIAHRISTIIEADHIIFIED 562
L G T I + HR S D ++ ++
Sbjct: 137 L--GITVISVGHRPSLWKFHDRVLDLDG 162