>gnl|CDD|72997 cd03238, ABC_UvrA, The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.. Length = 176

Score = 52.9 bits (127), Expect = 2e-07 Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 47/195 (24%) Query: 369 LSGINLCFKSGKMTALVGPSGSGKSTIINLLMRMYDPSSGSIEIDGINIRDITFSSLRER 428 L +++ + + G SGSGKST++N + ++S + R Sbjct: 11 LQNLDVSIPLNVLVVVTGVSGSGKSTLVN---------------------EGLYASGKAR 49 Query: 429 ISYVGQDVFLFSNTVRYNILIGRPMATEEEMIEIAKSANAHDFIMSLPQGYDTYVGENGS 488 + P + ++I I + F++ + GY T +G+ S Sbjct: 50 LIS------------------FLPKFSRNKLIFIDQLQ----FLIDVGLGYLT-LGQKLS 86 Query: 489 NLSGGQKQRIAIARAMLRDGH--ILVLDEATSALDTHTENLVRQALSRLM-QGRTTIVIA 545 LSGG+ QR+ +A + + + +LDE ++ L N + + + L+ G T I+I Sbjct: 87 TLSGGELQRVKLASELFSEPPGTLFILDEPSTGLHQQDINQLLEVIKGLIDLGNTVILIE 146 Query: 546 HRISTIIEADHIIFI 560 H + + AD II Sbjct: 147 HNLDVLSSADWIIDF 161

RPSBLAST alignment for GI: 254780917 and conserved domain: cd03238