HHsearch alignment for GI: 254780918 and conserved domain: COG2943
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=96.50 E-value=0.055 Score=30.43 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=102.3
Q ss_pred CEEEEEECCCCH-----HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH-----HHHHHHHHHCC--CCCEEEEECCCC
Q ss_conf 169999537745-----569999987642079751579971489981689-----99999986308--882799757888
Q gi|254780918|r 325 LVSIIIPTYNHH-----HLLKICLESIYHKTTYSSFEVIIIDNLSDDSKT-----FLYLQKIQKKY--PNLRVITDNTHP 392 (623)
Q Consensus 325 ~VSIIIp~~n~~-----~~l~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t-----~~~l~~~~~~~--~~~~~i~~~~~~ 392 (623)
T Consensus 145 rTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSD-s~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr~n- 222 (736)
T COG2943 145 RTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSD-SRDPDIALAEQKAWAELCRELGGEGNIFYRRRRRN- 222 (736)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH-
T ss_conf 2157730346678999998999999998617612002899748-99822566689999999998367772664067555-
Q ss_pred CCHHHHHHHH--HHH--CCCCEEEEECCCCEEECHHHHHHHHHHHC-CCCEEEEE--EEEECCCCCCCCCCCEEEECCEE
Q ss_conf 7338898987--861--48974744058827828168899887742-89816995--37664676756778704413254
Q gi|254780918|r 393 FNYSRINNNA--TLH--AKGQYFCFLNNDTEVINGQWLSEMMGIAS-QPQVGAVG--ARLWYRRKKLWKRSKRLQHGGVI 465 (623)
Q Consensus 393 ~n~s~~~N~g--~~~--a~geyilfLn~D~~v~~~~wL~~Ll~~~~-~~~vG~Vg--~~ll~~~~~~~~~d~~iqhaG~v 465 (623)
T Consensus 223 ~~RKaG-NIaDfcrRwG~~Y~~MlVLDADS-vMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~--TL~-AR~qQFatrv 297 (736)
T COG2943 223 VKRKAG-NIADFCRRWGSAYSYMLVLDADS-VMTGDCLVRLVRLMEANPDAGLIQTSPKASGGD--TLY-ARCQQFATRV 297 (736)
T ss_pred HCCCCC-CHHHHHHHHCCCCCEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCC--HHH-HHHHHHHHHH
T ss_conf 223346-78899987376532589960543-357278999999985299976032150332865--299-9999989887
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCH----HHHHHHCCHHHH--HHHHH
Q ss_conf 067865664322565555764422223344444111011020438888987179997----687632316889--99999
Q gi|254780918|r 466 MGINNIAGHKNKHHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDE----KNTPVVFSDIDL--CLRIL 539 (623)
Q Consensus 466 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE----~~~~~~~eDvDl--clR~~ 539 (623)
T Consensus 298 YGpl~~~GLawW~~---------------~Es~yW---GHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmR 359 (736)
T COG2943 298 YGPLFTAGLAWWQL---------------GESHYW---GHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMR 359 (736)
T ss_pred HCHHHHHHHHHHHC---------------CCCCCC---CCCCEEECHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 13377655678725---------------655544---442102304668744899999999977500140889999986
Q ss_pred HCCCEEEECCCEE
Q ss_conf 7498199847549
Q gi|254780918|r 540 EAGYRNVWTPHAD 552 (623)
Q Consensus 540 ~~G~r~v~~P~a~ 552 (623)
T Consensus 360 RaGW~v~ia~dL~ 372 (736)
T COG2943 360 RAGWGVWIAYDLD 372 (736)
T ss_pred HCCCEEEEECCCC
T ss_conf 3575488850689