HHsearch alignment for GI: 254780918 and conserved domain: COG2943

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=96.50  E-value=0.055  Score=30.43  Aligned_cols=203  Identities=16%  Similarity=0.169  Sum_probs=102.3

Q ss_pred             CEEEEEECCCCH-----HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH-----HHHHHHHHHCC--CCCEEEEECCCC
Q ss_conf             169999537745-----569999987642079751579971489981689-----99999986308--882799757888
Q gi|254780918|r  325 LVSIIIPTYNHH-----HLLKICLESIYHKTTYSSFEVIIIDNLSDDSKT-----FLYLQKIQKKY--PNLRVITDNTHP  392 (623)
Q Consensus       325 ~VSIIIp~~n~~-----~~l~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t-----~~~l~~~~~~~--~~~~~i~~~~~~  392 (623)
T Consensus       145 rTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSD-s~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr~n-  222 (736)
T COG2943         145 RTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSD-SRDPDIALAEQKAWAELCRELGGEGNIFYRRRRRN-  222 (736)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH-
T ss_conf             2157730346678999998999999998617612002899748-99822566689999999998367772664067555-


Q ss_pred             CCHHHHHHHH--HHH--CCCCEEEEECCCCEEECHHHHHHHHHHHC-CCCEEEEE--EEEECCCCCCCCCCCEEEECCEE
Q ss_conf             7338898987--861--48974744058827828168899887742-89816995--37664676756778704413254
Q gi|254780918|r  393 FNYSRINNNA--TLH--AKGQYFCFLNNDTEVINGQWLSEMMGIAS-QPQVGAVG--ARLWYRRKKLWKRSKRLQHGGVI  465 (623)
Q Consensus       393 ~n~s~~~N~g--~~~--a~geyilfLn~D~~v~~~~wL~~Ll~~~~-~~~vG~Vg--~~ll~~~~~~~~~d~~iqhaG~v  465 (623)
T Consensus       223 ~~RKaG-NIaDfcrRwG~~Y~~MlVLDADS-vMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~--TL~-AR~qQFatrv  297 (736)
T COG2943         223 VKRKAG-NIADFCRRWGSAYSYMLVLDADS-VMTGDCLVRLVRLMEANPDAGLIQTSPKASGGD--TLY-ARCQQFATRV  297 (736)
T ss_pred             HCCCCC-CHHHHHHHHCCCCCEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCC--HHH-HHHHHHHHHH
T ss_conf             223346-78899987376532589960543-357278999999985299976032150332865--299-9999989887


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCH----HHHHHHCCHHHH--HHHHH
Q ss_conf             067865664322565555764422223344444111011020438888987179997----687632316889--99999
Q gi|254780918|r  466 MGINNIAGHKNKHHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDE----KNTPVVFSDIDL--CLRIL  539 (623)
Q Consensus       466 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE----~~~~~~~eDvDl--clR~~  539 (623)
T Consensus       298 YGpl~~~GLawW~~---------------~Es~yW---GHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmR  359 (736)
T COG2943         298 YGPLFTAGLAWWQL---------------GESHYW---GHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMR  359 (736)
T ss_pred             HCHHHHHHHHHHHC---------------CCCCCC---CCCCEEECHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             13377655678725---------------655544---442102304668744899999999977500140889999986


Q ss_pred             HCCCEEEECCCEE
Q ss_conf             7498199847549
Q gi|254780918|r  540 EAGYRNVWTPHAD  552 (623)
Q Consensus       540 ~~G~r~v~~P~a~  552 (623)
T Consensus       360 RaGW~v~ia~dL~  372 (736)
T COG2943         360 RAGWGVWIAYDLD  372 (736)
T ss_pred             HCCCEEEEECCCC
T ss_conf             3575488850689