HHsearch alignment for GI: 254780918 and conserved domain: PRK11234
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional.
Probab=98.76 E-value=9.1e-07 Score=59.75 Aligned_cols=189 Identities=15% Similarity=0.193 Sum_probs=117.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCH--HHHHHHH
Q ss_conf 78999747589888999999999828-89974899987757806799999998875798899980888856--4899999
Q gi|254780918|r 68 LISVIMPVYKIKKEWLEMAIESVRSQ-IYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGHI--SAASNSA 144 (623)
Q Consensus 68 ~iSIiip~yn~~~~~L~~~i~Si~~Q-ty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g~--~~a~N~~ 144 (623)
T Consensus 68 ~lAimvPAW~-E~~VI~~M~e~~~~~~~y~~y~iFvG~-YpND~~T~~~v~~~~~~~p~v~~vv~~~~GPTsKadcLN~i 145 (646)
T PRK11234 68 PLAIMVPAWN-EYGVIANMAELAASTLDYENYHIFVGT-YPNDPDTQREVDRVCRRYPNVHKVVCARPGPTSKADCLNNV 145 (646)
T ss_pred CEEEEECCCC-HHHHHHHHHHHHHHHCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 3589932443-243599999988872677754899973-79987899999999852898699961898998589999999
Q ss_pred HHH------CCC---CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC----CCCCEEEC--CCCCE----EEECCCCCC
Q ss_conf 996------599---899997698752732079999998732475542----02220675--89836----542256678
Q gi|254780918|r 145 AQL------ATS---EWLALLDHDDLLHPTALYYVADAINNNPNAEII----YSDEDKIN--ENQIR----SGPYFKYDF 205 (623)
Q Consensus 145 l~~------a~G---e~i~~lD~DD~l~p~~L~~~~~~l~~~p~~~~i----YsDe~~i~--~~g~~----~~p~fkp~~ 205 (623)
T Consensus 146 ~~ai~~~E~~~~~~fag~vlHDaEDvihP~el~l~n~l~~~---~d~iQlPV~~l~~~~~~~vag~Y~DEFAE~H~Kd~v 222 (646)
T PRK11234 146 IDAIFQFEASAGIEFAGFILHDAEDVIHPLELRLFNYLLPR---KDLIQLPVYPLEREWYEFVAGTYMDEFAEWHGKDLV 222 (646)
T ss_pred HHHHHHHHHCCCCCEEEEEEECHHHCCCHHHHHHHHHHCCC---CCEEECCCCCCCCHHHHHHCHHHHHHHHHHHCCCCC
T ss_conf 99999988504972216888445634599899999864573---556535611265113022011105778887445446
Q ss_pred CHHHH-CCCCCCCHHHHHHHHHHHHH-----C-CCCCCCCCCCCCHHHHHHHHCCCCCCEEECC
Q ss_conf 96674-14785431457689999971-----8-8789877302741367886424875220068
Q gi|254780918|r 206 NPELF-HVHNMITHLGVYRTETFKKI-----G-GFREKFEGAQDYDLVLRFLENIDLSQIIHIP 262 (623)
Q Consensus 206 ~~~~l-~s~nyi~~~~~~rr~~~~~i-----G-gf~~~~~~~~D~Dl~lR~~~~~~~~~i~hip 262 (623)
T Consensus 223 VRe~l~g~VPSAGVGt~fsRral~~l~~~~~g~pF~~~S-LTEDYd~g~rl~~~G~r~~Fv~~p 285 (646)
T PRK11234 223 VREALTGQVPSAGVGTCFSRRAITALLADGDGIPFDVQS-LTEDYDIGFRLKEKGMTEIFVRFP 285 (646)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHCCCCCEEEECC
T ss_conf 887735868887403264499999999855999777775-411589899999758860799743