HHsearch alignment for GI: 254780918 and conserved domain: TIGR01556
>TIGR01556 rhamnosyltran rhamnosyltransferase; InterPro: IPR006446 This subfamily is composed of sequences from the gamma proteobacteria that function as L-rhamnosyltransferases in the synthesis of their respective surface polysaccharides. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In Pseudomonas aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids . .
Probab=99.51 E-value=1.7e-12 Score=94.78 Aligned_cols=185 Identities=22% Similarity=0.224 Sum_probs=123.7
Q ss_pred CCCC---CHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHC---
Q ss_conf 7589---8889999999998288997489998775780679999999887579889998088885648999999965---
Q gi|254780918|r 75 VYKI---KKEWLEMAIESVRSQIYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGHISAASNSAAQLA--- 148 (623)
Q Consensus 75 ~yn~---~~~~L~~~i~Si~~Qty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g~~~a~N~~l~~a--- 148 (623)
T Consensus 2 tfNPGdddl~~L~~l~~~l~~Q~---~~~i~vDN~~~s-~~~~~l~~~~~~~~~i~~i~ls~n~GiA~AqN~Gl~~~~~~ 77 (291)
T TIGR01556 2 TFNPGDDDLEVLKELITSLKKQV---DKIIVVDNSSLS-EIRSELKELLAKKEKIKLISLSDNEGIAAAQNLGLKASFKK 77 (291)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCC---EEEEEEECCCCC-CCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 54885478999999998765259---089999789543-32057899985007768996378541288987999999873
Q ss_pred CCCEEEEECCCCCCCCCH----HHHHHHHHHHCC-CCCCCCCCCEEECCCCCEEEECCC-----------CCCCHHHHCC
Q ss_conf 998999976987527320----799999987324-755420222067589836542256-----------6789667414
Q gi|254780918|r 149 TSEWLALLDHDDLLHPTA----LYYVADAINNNP-NAEIIYSDEDKINENQIRSGPYFK-----------YDFNPELFHV 212 (623)
Q Consensus 149 ~Ge~i~~lD~DD~l~p~~----L~~~~~~l~~~p-~~~~iYsDe~~i~~~g~~~~p~fk-----------p~~~~~~l~s 212 (623)
T Consensus 78 ~~~~vlLlDqDS~~~~~~~~~fl~~~~~~l~~~~~~~~~~GP--~~~Dr~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~ 155 (291)
T TIGR01556 78 GVEKVLLLDQDSRPAEDGVNKFLAKELKLLSEEKLQAVAVGP--SFFDRKTSRRLPIVKLKGNLLLKKIKVDEKKTPVKT 155 (291)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC--EEEECCCCEECCCEEECCCCCEEEEEECCCCCCEEE
T ss_conf 896688851278432034899999998865422662799878--257768870536165126620025532388983588
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHCCCCCCEEECCCC-EEE
Q ss_conf 785431457689999971887898773-0274136788642487522006842-279
Q gi|254780918|r 213 HNMITHLGVYRTETFKKIGGFREKFEG-AQDYDLVLRFLENIDLSQIIHIPRV-LYH 267 (623)
Q Consensus 213 ~nyi~~~~~~rr~~~~~iGgf~~~~~~-~~D~Dl~lR~~~~~~~~~i~hip~v-Ly~ 267 (623)
T Consensus 156 ~flIaSGtli~~E~~~~~G~m~E~lFIDyvDtEwslR~~~~g--~~ly~~~d~~l~H 210 (291)
T TIGR01556 156 DFLIASGTLIKKEVLKSVGMMDEELFIDYVDTEWSLRALNYG--IKLYIIPDIVLEH 210 (291)
T ss_pred EEEEECHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCC--CEEEEECCEEEEE
T ss_conf 878612267999998725764203321334153688888778--2488517568985