HHsearch alignment for GI: 254780918 and conserved domain: cd00218
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=96.45 E-value=0.026 Score=32.49 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=65.7
Q ss_pred CCEEEEEECCCCH---HHHHHHHHHHHHCCCCCCEEEEEECCCC-CCHHHHHHHHHHHHCCCCCEEE-EECCCCCCH---
Q ss_conf 8169999537745---5699999876420797515799714899-8168999999986308882799-757888733---
Q gi|254780918|r 324 PLVSIIIPTYNHH---HLLKICLESIYHKTTYSSFEVIIIDNLS-DDSKTFLYLQKIQKKYPNLRVI-TDNTHPFNY--- 395 (623)
Q Consensus 324 P~VSIIIp~~n~~---~~l~~cl~Sl~~~t~y~~~EiivVdn~S-~d~~t~~~l~~~~~~~~~~~~i-~~~~~~~n~--- 395 (623)
T Consensus 1 p~i~vVTPTy~R~~Q~a~LtRLa~TL~-lV--p~l~WIVVEd~~~~t~~v~~lL~~sgl---~y~HL~~~~~~~~~~~~~ 74 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLR-LV--PPLHWIVVEDSEEKTPLVAELLRRSGL---MYTHLNAKTPSDPTWLKP 74 (223)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHH-CC--CCCEEEEEECCCCCCHHHHHHHHHCCC---CEEEEECCCCCCCCCCCC
T ss_conf 959998888876146799999988986-28--981699996798889899999997499---649863488888888775
Q ss_pred --HHHHHHHHHHCC-------CCEEEEECCCCEEECHHHHHHHHHH--HCCCCEEEEEEEE
Q ss_conf --889898786148-------9747440588278281688998877--4289816995376
Q gi|254780918|r 396 --SRINNNATLHAK-------GQYFCFLNNDTEVINGQWLSEMMGI--ASQPQVGAVGARL 445 (623)
Q Consensus 396 --s~~~N~g~~~a~-------geyilfLn~D~~v~~~~wL~~Ll~~--~~~~~vG~Vg~~l 445 (623)
T Consensus 75 rg~~qRn~aL~~ir~~~~~~~~GVVyFaDDdN-tYsl~lF~emR~~k~vg~WPVglvg~~~ 134 (223)
T cd00218 75 RGVEQRNLALRWIREHLSAKLDGVVYFADDDN-TYDLELFEEMRKIKRVGVWPVGLVGGLR 134 (223)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC-EECHHHHHHHHCCEEEEEEEEEEECCCE
T ss_conf 11899999999999667667876999756997-0048999876542078798765552622