HHsearch alignment for GI: 254780918 and conserved domain: cd04184
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=100.00 E-value=0 Score=370.80 Aligned_cols=202 Identities=61% Similarity=0.995 Sum_probs=194.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 97899974758988899999999982889974899987757806799999998875798899980888856489999999
Q gi|254780918|r 67 PLISVIMPVYKIKKEWLEMAIESVRSQIYSHWELCIAEDCSGDIETVSLLKKYANMDSRIKVVFRAKNGHISAASNSAAQ 146 (623)
Q Consensus 67 P~iSIiip~yn~~~~~L~~~i~Si~~Qty~~~EliivdD~S~d~~~~~~l~~~~~~d~ri~~~~~~~n~g~~~a~N~~l~ 146 (623)
T Consensus 1 P~vSViip~yN~~~~~l~~~l~Si~~Qt~~~~EiIvvDd~StD~~~~~~~~~~~~~~~~i~~~~~~~n~G~~~a~N~gi~ 80 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALE 80 (202)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93999997488966999999999983789987999998998947899999998851885200126788789999886451
Q ss_pred HCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHHHCCCCCCCHHHHHHHHH
Q ss_conf 65998999976987527320799999987324755420222067589836542256678966741478543145768999
Q gi|254780918|r 147 LATSEWLALLDHDDLLHPTALYYVADAINNNPNAEIIYSDEDKINENQIRSGPYFKYDFNPELFHVHNMITHLGVYRTET 226 (623)
Q Consensus 147 ~a~Ge~i~~lD~DD~l~p~~L~~~~~~l~~~p~~~~iYsDe~~i~~~g~~~~p~fkp~~~~~~l~s~nyi~~~~~~rr~~ 226 (623)
T Consensus 81 ~a~geyi~flD~DD~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~ 160 (202)
T cd04184 81 LATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDWSPDLLLSQNYIGHLLVYRRSL 160 (202)
T ss_pred CCCCCEEEECCCCCEECHHHHHHHHHHHHHCCCCCEEECCHHEECCCCCEEECCCCCCCCHHHHHHCCCCCHHHHHHHHH
T ss_conf 36876677327785528439999999998689935997371168679978721247877988985347632036668999
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCEEEEEE
Q ss_conf 99718878987730274136788642487522006842279953
Q gi|254780918|r 227 FKKIGGFREKFEGAQDYDLVLRFLENIDLSQIIHIPRVLYHWRM 270 (623)
Q Consensus 227 ~~~iGgf~~~~~~~~D~Dl~lR~~~~~~~~~i~hip~vLy~~R~ 270 (623)
T Consensus 161 ~~~iGgfde~~~~~eD~dl~lRl~~~g--~ki~~ip~~Ly~yR~ 202 (202)
T cd04184 161 VRQVGGFREGFEGAQDYDLVLRVSEHT--DRIAHIPRVLYHWRA 202 (202)
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHC--CEEEEECHHHEEECC
T ss_conf 999589898888316999999999819--979992808849682