HHsearch alignment for GI: 254780918 and conserved domain: cd06421
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=100.00 E-value=2e-38 Score=253.72 Aligned_cols=209 Identities=19% Similarity=0.298 Sum_probs=150.1
Q ss_pred CCEEEEEECCCCH-HHHHHHHHHHHHCCCCCC--EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 8169999537745-569999987642079751--5799714899816899999998630888279975788873388989
Q gi|254780918|r 324 PLVSIIIPTYNHH-HLLKICLESIYHKTTYSS--FEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINN 400 (623)
Q Consensus 324 P~VSIIIp~~n~~-~~l~~cl~Sl~~~t~y~~--~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N 400 (623)
T Consensus 1 P~VsViIPayNE~~~~i~~~l~sl~~q~-YP~~~~eIiVvdD~std-~t~~~~~~~~~~~~-~~~~~~~~~~g~Ka~alN 77 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAID-YPHDKLRVYVLDDGRRP-ELRALAAELGVEYG-YRYLTRPDNRHAKAGNLN 77 (234)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCH-HHHHHHHHHCCCCE-EEEEECCCCCCCHHHHHH
T ss_conf 9399999838997899999999999679-99982899999898987-88988888456643-688874889997699999
Q ss_pred HHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHC-CCCEEEEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCC
Q ss_conf 8786148974744058827828168899887742-898169953766467675677870441325406786566432256
Q gi|254780918|r 401 NATLHAKGQYFCFLNNDTEVINGQWLSEMMGIAS-QPQVGAVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKHH 479 (623)
Q Consensus 401 ~g~~~a~geyilfLn~D~~v~~~~wL~~Ll~~~~-~~~vG~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~~ 479 (623)
T Consensus 78 ~g~~~a~gd~v~~~DaD~~-~~~~~L~~~~~~~~~~~~v~~v~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~ 145 (234)
T cd06421 78 NALAHTTGDFVAILDADHV-PTPDFLRRTLGYFLDDPKVALVQTPQFFYNP-----DPFDWLAD------GAPNEQELFY 145 (234)
T ss_pred HHHHHCCCCEEEEECCCCC-CCHHHHHHHHHHHHHCCCEEEEECCEEEECC-----CCCCHHHH------HHHHHHHHHH
T ss_conf 9999778999999889877-0876999999999869975899535677348-----83328999------9999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEECC
Q ss_conf 5555764422223344444111011020438888987179997687632316889999997498199847549995177
Q gi|254780918|r 480 KARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCLRILEAGYRNVWTPHADLYHDES 558 (623)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a~v~H~es 558 (623)
T Consensus 146 ~~~--~~~~------~~~~~~~~~G~~~~~rr~~l~~vGgf~~~~~---~ED~dl~~rl~~~G~k~~y~p~a~~~~~~p 213 (234)
T cd06421 146 GVI--QPGR------DRWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVPEPLAAGLAP 213 (234)
T ss_pred HHH--HHHH------HCCCCEEECCCHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHHHCCCEEEEECCCEEEEECC
T ss_conf 999--9887------3388425535506788999998189999997---659999999997699799936867986789