HHsearch alignment for GI: 254780918 and conserved domain: cd06442

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.78  E-value=1e-17  Score=126.77  Aligned_cols=205  Identities=19%  Similarity=0.273  Sum_probs=138.5

Q ss_pred             EEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf             99953774556999998764207975157997148998168999999986308882799757888733889898786148
Q gi|254780918|r  328 IIIPTYNHHHLLKICLESIYHKTTYSSFEVIIIDNLSDDSKTFLYLQKIQKKYPNLRVITDNTHPFNYSRINNNATLHAK  407 (623)
Q Consensus       328 IIIp~~n~~~~l~~cl~Sl~~~t~y~~~EiivVdn~S~d~~t~~~l~~~~~~~~~~~~i~~~~~~~n~s~~~N~g~~~a~  407 (623)
T Consensus         1 IIIP~yNEe~~i~~~l~~i~~~~~~~~~eIIvVdDgStD-~T~~i~~~l~~~~~~~~~i~~~~-n~G~g~Ai~~G~~~a~   78 (224)
T cd06442           1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPD-GTAEIVRELAKEYPRVRLIVRPG-KRGLGSAYIEGFKAAR   78 (224)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC-CCHHHHHHHHCCCCCEEEEECCC-CCCHHHHHHHHHHHHC
T ss_conf             399954878889999999998606899499999896973-71788865422477247863366-7872799999998601


Q ss_pred             CCEEEEECCCCEEECHHHHHHHHHHHCCCCEE-EEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             97474405882782816889988774289816-99537664676756778704413254067865664322565555764
Q gi|254780918|r  408 GQYFCFLNNDTEVINGQWLSEMMGIASQPQVG-AVGARLWYRRKKLWKRSKRLQHGGVIMGINNIAGHKNKHHKARCSVP  486 (623)
Q Consensus       408 geyilfLn~D~~v~~~~wL~~Ll~~~~~~~vG-~Vg~~ll~~~~~~~~~d~~iqhaG~v~g~~~~~~~~~~~~~~~~~~~  486 (623)
T Consensus        79 ~~~i~~~DaD~q~-~p~~i~~li~~~~~~~~d~V~GsR~~~~--------~~~~~~~~-----------~r~~~s~--~~  136 (224)
T cd06442          79 GDVIVVMDADLSH-PPEYIPELLEAQLEGGADLVIGSRYVEG--------GGVEGWGL-----------KRKLISR--GA  136 (224)
T ss_pred             CCCEEEECCCCCC-CHHHHHHHHHHHHCCCCCEEEEEEECCC--------CCCCCCHH-----------HHHHHHH--HH
T ss_conf             7846886599976-2777899999987188724798876279--------86357706-----------6678888--88


Q ss_pred             CCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCC-CCHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEECCCC
Q ss_conf             422223344444111011020438888987179-99768763231688999999749819984754999517733
Q gi|254780918|r  487 NYQAFAMHFTHSISAVTGACMVMSKKCFMHVGG-FDEKNTPVVFSDIDLCLRILEAGYRNVWTPHADLYHDESRT  560 (623)
Q Consensus       487 ~~~~~~~~~~~~~savtgacllirr~~f~~iGG-fDE~~~~~~~eDvDlclR~~~~G~r~v~~P~a~v~H~es~s  560 (623)
T Consensus       137 ~~i-~~~l~~~~i~D~~~gfr~~~~~~~~~i~~~~~~~~f~---~~~ei~~~~~~~~~ki~evpv~~~~R~~G~S  207 (224)
T cd06442         137 NLL-ARLLLGRKVSDPTSGFRAYRREVLEKLIDSLVSKGYK---FQLELLVRARRLGYRIVEVPITFVDREHGES  207 (224)
T ss_pred             HHH-HHHCCCCEECCCCCCEEEEEHHHHHHHHHHCCCCCCC---CHHHHHHHHHHCCCEEEEEEEEECCCCCCCC
T ss_conf             876-3230584243179963998899999887754566630---1899999999889989999727779999803