HHsearch alignment for GI: 254780918 and conserved domain: cd06913

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=100.00  E-value=4.2e-45  Score=294.64  Aligned_cols=204  Identities=24%  Similarity=0.368  Sum_probs=159.2

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHHHHHC--CCEEEEECCC----CCCHHHHHHH
Q ss_conf             997475898889999999998288997-48999877578067999999988757--9889998088----8856489999
Q gi|254780918|r   71 VIMPVYKIKKEWLEMAIESVRSQIYSH-WELCIAEDCSGDIETVSLLKKYANMD--SRIKVVFRAK----NGHISAASNS  143 (623)
Q Consensus        71 Iiip~yn~~~~~L~~~i~Si~~Qty~~-~EliivdD~S~d~~~~~~l~~~~~~d--~ri~~~~~~~----n~g~~~a~N~  143 (623)
T Consensus         1 VIiP~YN~-~~~l~~~l~Svl~Qty~~~~EiIiVDDgStD-~t~~ii~~~~~~~~~~~~~~~~~~~~~~~~~G~~~arN~   78 (219)
T cd06913           1 IILPVHNG-EQWLDECLESVLQQDFEGTLELSVFNDASTD-KSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQ   78 (219)
T ss_pred             CEECCCCC-HHHHHHHHHHHHHCCCCCCEEEEEEECCCCC-CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf             98867898-8999999999984889998999999899981-569999999986667776999823677664678999999


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHHHCCC------CC-C
Q ss_conf             9996599899997698752732079999998732475542022206758983654225667896674147------85-4
Q gi|254780918|r  144 AAQLATSEWLALLDHDDLLHPTALYYVADAINNNPNAEIIYSDEDKINENQIRSGPYFKYDFNPELFHVH------NM-I  216 (623)
Q Consensus       144 ~l~~a~Ge~i~~lD~DD~l~p~~L~~~~~~l~~~p~~~~iYsDe~~i~~~g~~~~p~fkp~~~~~~l~s~------ny-i  216 (623)
T Consensus        79 gi~~A~GeyI~flDsDD~~~p~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (219)
T cd06913          79 AIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWINTLTREQLLTQVYTSHGPTVI  157 (219)
T ss_pred             HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC-CEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf             999778887886189764276599999999985999-6999878996699852313223568989999988761698344


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCCC
Q ss_conf             31457689999971887898773-0274136788642487522006842279953388533880
Q gi|254780918|r  217 THLGVYRTETFKKIGGFREKFEG-AQDYDLVLRFLENIDLSQIIHIPRVLYHWRMHDNSTAQKI  279 (623)
Q Consensus       217 ~~~~~~rr~~~~~iGgf~~~~~~-~~D~Dl~lR~~~~~~~~~i~hip~vLy~~R~~~~s~~~~~  279 (623)
T Consensus       158 ~~~~~~rr~~~~~~g~f~e~~~~~~ED~~~~~r~l~~~--~~i~~i~~~L~~YR~H~~s~T~s~  219 (219)
T cd06913         158 MPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKG--GGVYRVDRCLLLYRYHPGATTHSV  219 (219)
T ss_pred             EHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC--CCEEEECCCEEEEEECCCCCCCCC
T ss_conf             00355329999992899965786702899999999749--969996997799997698550269