HHsearch alignment for GI: 254780918 and conserved domain: pfam03552
>pfam03552 Cellulose_synt Cellulose synthase. Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits', plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity.
Probab=91.37 E-value=0.4 Score=25.17 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=64.5
Q ss_pred CCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCCC-CCCHHHHHHHHHHHCC--CCCCCCCC----
Q ss_conf 79889998088885-----64899999996----599899997698752-7320799999987324--75542022----
Q gi|254780918|r 123 DSRIKVVFRAKNGH-----ISAASNSAAQL----ATSEWLALLDHDDLL-HPTALYYVADAINNNP--NAEIIYSD---- 186 (623)
Q Consensus 123 d~ri~~~~~~~n~g-----~~~a~N~~l~~----a~Ge~i~~lD~DD~l-~p~~L~~~~~~l~~~p--~~~~iYsD---- 186 (623)
T Consensus 165 lP~LVYvSREKrP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCfll-D~~~g~~~afVQFPQr 243 (716)
T pfam03552 165 LPRLVYVSREKRPGYDHHKKAGAMNALVRVSAVLTNGPFILNLDCDHYINNSKAIREAMCFMM-DPGLGKKVCYVQFPQR 243 (716)
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHC-CCCCCCCEEEEECCCC
T ss_conf 643899964668898631011145778877653127976894346230378257999788710-7877883268858821
Q ss_pred ---CEEECCCCCEEEECCCCCC-CHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf ---2067589836542256678-966741478543145768999997188789
Q gi|254780918|r 187 ---EDKINENQIRSGPYFKYDF-NPELFHVHNMITHLGVYRTETFKKIGGFRE 235 (623)
Q Consensus 187 ---e~~i~~~g~~~~p~fkp~~-~~~~l~s~nyi~~~~~~rr~~~~~iGgf~~ 235 (623)
T Consensus 244 F~gi~k~D~Y~n~~~v~fd~~~~GldGlqGP~YvGTGCffRR~alY---G~~P 293 (716)
T pfam03552 244 FDGIDPSDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALY---GYDP 293 (716)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEEC---CCCC
T ss_conf 3799978777760368886203565556785010355225300103---7898