HHsearch alignment for GI: 254780918 and conserved domain: pfam11397
>pfam11397 GlcNAc Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.
Probab=97.91 E-value=0.0016 Score=39.87 Aligned_cols=216 Identities=16% Similarity=0.120 Sum_probs=114.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHCCCCC-CEEEEEECCCCCCHHHHHHHHH--------------HHHCCCCCEEEEEC-
Q ss_conf 6999953774556999998764207975-1579971489981689999999--------------86308882799757-
Q gi|254780918|r 326 VSIIIPTYNHHHLLKICLESIYHKTTYS-SFEVIIIDNLSDDSKTFLYLQK--------------IQKKYPNLRVITDN- 389 (623)
Q Consensus 326 VSIIIp~~n~~~~l~~cl~Sl~~~t~y~-~~EiivVdn~S~d~~t~~~l~~--------------~~~~~~~~~~i~~~- 389 (623)
T Consensus 2 IFVsIASYRD~-el~~Tl~~~~~~A~~P~rl~vGI~~Q~~~~d~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ir~~~i~~ 80 (324)
T pfam11397 2 IFVSIASYRDP-ELIPTLHDLFDRAANPERLYVGVCWQHSADDPPCLSLTCFPAEGYGGPSPLHLLALNGANVRLIHVPP 80 (324)
T ss_pred EEEEEECCCCC-CHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECH
T ss_conf 68986335784-40999999998267988418999982688886210012203421122454321113467169998287
Q ss_pred --CCCCCHHHHHHHHHHHCCC-CEEEEECCCCEEECHHHHHHHHHHHCC--CCEEEEEEEEECCCCCCCCCCC-------
Q ss_conf --8887338898987861489-747440588278281688998877428--9816995376646767567787-------
Q gi|254780918|r 390 --THPFNYSRINNNATLHAKG-QYFCFLNNDTEVINGQWLSEMMGIASQ--PQVGAVGARLWYRRKKLWKRSK------- 457 (623)
Q Consensus 390 --~~~~n~s~~~N~g~~~a~g-eyilfLn~D~~v~~~~wL~~Ll~~~~~--~~vG~Vg~~ll~~~~~~~~~d~------- 457 (623)
T Consensus 81 ~~s~G~~~AR--~~~~~~~~~E~y~lqiDsH~~-f~~~WD~~LI~~~~~~~~~kpVLT~---Yp~~y~~~~~~~~~~~~~ 154 (324)
T pfam11397 81 DQSRGPCWAR--YLAQLLYNGEDYTLQIDSHTR-FVPGWDELLITMLERLRSPKPVLSH---YPPGYQPEKSDPELEKTT 154 (324)
T ss_pred HHCCCHHHHH--HHHHHHHCCCEEEEEEEEEEE-ECCCHHHHHHHHHHHCCCCCEEEEE---CCCCCCCCCCCCCCCCCC
T ss_conf 7645808999--999998568817999700045-5137889999999973898816840---787756667875455766
Q ss_pred -EEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHCCCCHHHHHHHCCHHHHHH
Q ss_conf -0441325406786566432256555576442222334444411101102043888898717999768763231688999
Q gi|254780918|r 458 -RLQHGGVIMGINNIAGHKNKHHKARCSVPNYQAFAMHFTHSISAVTGACMVMSKKCFMHVGGFDEKNTPVVFSDIDLCL 536 (623)
Q Consensus 458 -~iqhaG~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~savtgacllirr~~f~~iGGfDE~~~~~~~eDvDlcl 536 (623)
T Consensus 155 ~~~~~~~~-f~~~g~~~~----~~~--~~~~--~~~~~~P~~~~f~aagF~Fa~g~fv~eVP-yDP~l~-F~GEEis~a~ 223 (324)
T pfam11397 155 VTRMCFAE-FLPYGIVKL----RSR--WITP--ATQLSEPLPQGFVAAGFLFADGSFVRDVP-FDPHLL-FDGEEILYSA 223 (324)
T ss_pred CCEEEEEE-ECCCCCEEE----CCC--CCCC--CCCCCCCCCCCCCCCEEEEECCEEHHHCC-CCCCEE-ECHHHHHHHH
T ss_conf 77888899-999984541----554--2257--66678753310012324785111021269-995204-4327999999
Q ss_pred HHHHCCCEEEECCCEEEEEECCC
Q ss_conf 99974981998475499951773
Q gi|254780918|r 537 RILEAGYRNVWTPHADLYHDESR 559 (623)
Q Consensus 537 R~~~~G~r~v~~P~a~v~H~es~ 559 (623)
T Consensus 224 R~~T~GYDlf~P~~~~~~H~Y~r 246 (324)
T pfam11397 224 RAWTHGYDLYHPHRLLLFHLYTR 246 (324)
T ss_pred HHHHCCCCEECCCCCEEEEECCC
T ss_conf 99876885556887627996658