HHsearch alignment for GI: 254780919 and conserved domain: pfam00908
>pfam00908 dTDP_sugar_isom dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyse the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.
Probab=100.00 E-value=0 Score=427.37 Aligned_cols=174 Identities=51% Similarity=0.956 Sum_probs=168.8
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHH
Q ss_conf 96575399707622037950421108898986799874134423312520000000155555440121000022222343
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIA 80 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvv 80 (198)
T Consensus 4 t~I~gv~~i~~~~~~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~S-~kgvlRGlH~q~~p~~q~Klv~ci~G~i~dvv 82 (177)
T pfam00908 4 LAIPGVLLIEPRVFGDERGFFSESFNAEEFEEAGGHPDFVQDNHSFS-SRGVLRGLHYQQPPPAQGKLVRCVRGEVFDVA 82 (177)
T ss_pred CCCCCEEEEECCEEECCCCCEEEEECHHHHHHHCCCCCCCEEEEEEC-CCCCEEEECEECCCCCCEEEEEEEECEEEEEE
T ss_conf 76898799989524879927888816789997489998738998896-69918988502899886249999406698999
Q ss_pred HHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 34064213331001136623653023330232203453074533897217876710170216888011774788876763
Q gi|254780919|r 81 VDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTILP 160 (198)
Q Consensus 81 vDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~p 160 (198)
T Consensus 83 vDlR~~S~Tfgk~~~~~L~~~~~~~l~IP~G~aHGf~~L~d~~~v~Y~~~~~y~p~~e~gi~~~Dp~l~i~WP~~~~~~~ 162 (177)
T pfam00908 83 VDIRKGSPTFGKWVGVELSAENRRQLWIPEGFAHGFLALSDDAEVLYKVSAYYSPEAERGIRWNDPAIGIDWPLADGPEP 162 (177)
T ss_pred EECCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCEEECCCCCHHCCCCCCCCCCCC
T ss_conf 98988989888489999767757559968986389998079979999837623866650675899520866888999776
Q ss_pred EECHHHHCCCCHHHC
Q ss_conf 016788459987781
Q gi|254780919|r 161 SVSEKDQNLPFLNQI 175 (198)
Q Consensus 161 iiS~kD~~~p~l~d~ 175 (198)
T Consensus 163 iiS~kD~~~p~l~~a 177 (177)
T pfam00908 163 SLSEKDANAPLLAEA 177 (177)
T ss_pred EECHHHCCCCCCCCC
T ss_conf 887899199980319