HHsearch alignment of GI: 254780919 and MMDB domain: 1upi_A_
>1upi_A (A:) DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=394.84 Aligned_cols=182 Identities=31% Similarity=0.585 Sum_probs=175.1
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
++|+||++++++.|.|+||+|.|+|+.+++.++ +.++.++|+|+|+| ++||+||||+|.+|++|+|+++|++|+|++|
T Consensus 26 ~~I~Gv~ii~~~~~~D~RG~f~e~f~~~~~~~~~~~~~~~~q~~~s~s-~~G~iRGlH~h~~p~~q~klv~ci~G~i~~v 104 (225)
T 1upi_A 26 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVS-SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDV 104 (225)
T ss_dssp CSSTTEEEEECCEEEETTEEEECSCCHHHHHHHHSSCCCCCEEEEEEE-CTTBEEEEEEECTTTCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHH-HHHHEEEEEEECCCCHHHHHEEEEEEEEEEE
T ss_conf 648966999793167889485685147899986199864023333222-2333054577316511343100100048999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||+|..++|+++++++||||+||||||++|+|+++++|++|.+|+|++|.+|+|+||+|+|+||++....
T Consensus 105 ~vD~R~~SpTfG~~~~~~l~~~~~~~l~IP~G~aHgf~~lsd~a~lly~~s~~ydp~~e~~i~~~Dp~l~i~Wp~~~~~~ 184 (225)
T 1upi_A 105 VVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLXSAEYNPQREHTIXATDPTLAVDWPLVDGAA 184 (225)
T ss_dssp EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESSCCCTTTEEECCTTCTTTCCCCCCSTTCC
T ss_pred EEECCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCHHCCCCCCCCCCCC
T ss_conf 98403575538807899830366414896389679998606865678856875181347234489800097899989878
Q ss_pred CEECHHHHCCCCHHHCCCCCEECC
Q ss_conf 301678845998778185512356
Q gi|254780919|r 160 PSVSEKDQNLPFLNQIDSPFEYDG 183 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~~~f~~~~ 183 (198)
|||||||+++|.|+|+.++|.+..
T Consensus 185 ~iiS~kD~~~p~l~~~~~~~~~p~ 208 (225)
T 1upi_A 185 PSLSDRDAAAPSFEDVRASGLLPR 208 (225)
T ss_dssp CBCCHHHHTCCCHHHHHHTTCSCB
T ss_pred CEECHHHCCCCCHHHHHHCCCCCC
T ss_conf 687889929999899976699998