HHsearch alignment of GI: 254780919 and MMDB domain: 1vrb_A_1-254
>1vrb_A (A:1-254) Putative asparaginyl hydroxylase; 2636534, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.60A {Bacillus subtilis}
Probab=93.13 E-value=0.17 Score=28.74 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH----------------------------
Q ss_conf 8741344233125200000001555554401210000222223433406421----------------------------
Q gi|254780919|r 36 QDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS---------------------------- 87 (198)
Q Consensus 36 ~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S---------------------------- 87 (198)
.......++-++ .+|+.-++|+... .-++..+.|+-...+.......
T Consensus 137 ~~~~~~~~~~~g-~~g~~t~~H~D~~----~~~~~qi~G~K~w~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (254)
T 1vrb_A 137 AGTSSKAIVYAA-KNGGGFKAHFDAY----TNLIFQIQGEKTWKLAKNENVSNPXQHYDLSEAPYYPDDLQSYWKGDPPK 211 (254)
T ss_dssp TTCCEEEEEEEE-CSSCCCCSEECSS----EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCC
T ss_pred CCCCCCEEEEEC-CCCCCCCCCCCCC----CEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHH
T ss_conf 344343157634-7887662004776----43898733638999968754455566765333666623223331010613
Q ss_pred HHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 333100113662365302333023220345307453389721
Q gi|254780919|r 88 PTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 88 pTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
...-+...++|.+ |.+||||+|.+|--.+++++..+.+..
T Consensus 212 ~~~~~~~~~~l~p--GD~LyiP~gw~H~v~~~~~sisv~~~f 251 (254)
T 1vrb_A 212 EDLPDAEIVNLTP--GTXLYLPRGLWHSTKSDQATLALNITF 251 (254)
T ss_dssp TTCCSSEEEEECT--TCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred HHCCCCEEEEECC--CCEEEECCCCCEEEEECCCEEEEEEEE
T ss_conf 4147536999779--878997899727878658707999975