HHsearch alignment of GI: 254780919 and MMDB domain: 3k3o_A_1-274
>3k3o_A (A:1-274) PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, alternative splicing, mental retardation, metal-binding; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 2wwu_A*
Probab=90.05 E-value=0.33 Score=27.12 Aligned_cols=86 Identities=14% Similarity=0.089 Sum_probs=52.1
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHH------------------CCCCH-HHHHHEEEEEEE
Q ss_conf 13442331252000000015555544012100002222234334------------------06421-333100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVD------------------IRRNS-PTYGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvD------------------lR~~S-pTfgk~~~~~Ls 99 (198)
..+.++-++ .+|+.-++|.+.. ...-++..+.|+-...+.. ..+.. ...-+...++|.
T Consensus 146 ~~~~~~~~g-~~gs~t~~H~d~~--~~~~~~~~i~G~K~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (274)
T 3k3o_A 146 NVQKYCLMS-VRDSYTDFHIDFG--GTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVK 222 (274)
T ss_dssp CCSCEEEEE-CTTEEEEEECCGG--GCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEE
T ss_pred CCEEEEEEE-CCCCCCCEEECCC--CCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHCCCEEEEEEC
T ss_conf 753689997-8999998778899--9856899952438999968750355555555664145554304424735999988
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 365302333023220345307453389721
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKV 129 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~ 129 (198)
+ |.+||||+|.+|--.++++...+.+..
T Consensus 223 p--GD~LyiP~gw~H~v~~~~~sis~~~nf 250 (274)
T 3k3o_A 223 Q--GQTLFIPTGWIHAVLTPVDCLAFGGNF 250 (274)
T ss_dssp T--TCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred C--CCEEEECCCCEEEEECCCCEEEECCCC
T ss_conf 9--988986899648987587879983654