HHsearch alignment of GI: 254780919 and MMDB domain: 3kv5_D_134-393
>3kv5_D (D:134-393) JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=91.86 E-value=0.3 Score=27.37 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=57.0
Q ss_pred EEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH------------------HH-HHHEEEEEEE
Q ss_conf 1344233125200000001555554401210000222223433406421------------------33-3100113662
Q gi|254780919|r 39 FVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS------------------PT-YGCWVSLEIS 99 (198)
Q Consensus 39 ~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S------------------pT-fgk~~~~~Ls 99 (198)
..+.+.-++ .+|+.-++|.+... ..-++..+.|+-...++...... .. +-+...++|.
T Consensus 132 ~~~~~l~ig-~~gs~t~~h~~~d~--~~~~~~~i~G~K~~~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (260)
T 3kv5_D 132 FVQKYCLMG-VQDSYTDFHIDFGG--TSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVK 208 (260)
T ss_dssp CCSCEEEEE-CTTCEEEEECCGGG--CEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEE
T ss_pred CEEEEEEEE-CCCCCCCEEECCCC--CEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCHHHCCCEEEEEEC
T ss_conf 706799993-49988862587898--715899873229999969873462112465666542100020213533999987
Q ss_pred CCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf 36530233302322034530745338972178767
Q gi|254780919|r 100 ANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYS 134 (198)
Q Consensus 100 ~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~ 134 (198)
+ |.+||||+|.+|--.++++...+.+......+
T Consensus 209 p--GD~LyiP~gw~H~v~~~~~sisvs~~~~~~~~ 241 (260)
T 3kv5_D 209 Q--GHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 241 (260)
T ss_dssp T--TCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred C--CCEEEECCCCEEEEECCCCEEEECCCCCCCCC
T ss_conf 9--97899579944999846357997651577656