HHsearch results for GI: 254780919 and protein with PDBid: 1upi_A
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=100.00 E-value=0 Score=418.37 Aligned_cols=178 Identities=32% Similarity=0.608 Sum_probs=170.6
Q ss_pred CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf 965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r 1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI 79 (198)
Q Consensus 1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv 79 (198)
|+|+||+++++++|.|+||+|.|+|+.+.++++ +.++.|+|+|+|+| +||||||||||.+|++|+|||+|++|+|+||
T Consensus 26 ~~I~Gv~li~~~~f~D~RG~F~e~f~~~~~~~~~~~~~~~~Q~n~S~S-~kgvlRGlH~Q~~p~~q~Klv~ci~G~I~dv 104 (225)
T 1upi_A 26 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVS-SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDV 104 (225)
T ss_dssp CSSTTEEEEECCEEEETTEEEECSCCHHHHHHHHSSCCCCCEEEEEEE-CTTBEEEEEEECTTTCCCEEEEEEESEEEEE
T ss_pred CCCCCEEEEECCCEECCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEC-CCCEEEEEEEECCCCCEEEEEEEECCEEEEE
T ss_conf 638976999796267899387785126799986299988762798886-6994999974158887657878540689999
Q ss_pred HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r 80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL 159 (198)
Q Consensus 80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~ 159 (198)
+||+|++|||||+|.+++|+++++.+||||+||||||+||+|+|+++|+|+++|+|+.|.+|+|+||.|+|+||+.+...
T Consensus 105 vvDlRk~S~Tfgk~~~~~Ls~~~~~~l~IP~G~aHGf~tL~d~t~v~Y~~s~~y~p~~e~~i~~~Dp~l~I~Wp~~~~~~ 184 (225)
T 1upi_A 105 VVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAA 184 (225)
T ss_dssp EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESSCCCTTTEEECCTTCTTTCCCCCCSTTCC
T ss_pred EEEECCCCCCCCEEEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 97300377648849999955177526984899648999727886899966885083576446489801197899989878
Q ss_pred CEECHHHHCCCCHHHCCCCC
Q ss_conf 30167884599877818551
Q gi|254780919|r 160 PSVSEKDQNLPFLNQIDSPF 179 (198)
Q Consensus 160 piiS~kD~~~p~l~d~~~~f 179 (198)
||||+||+++|+|+|+.+.+
T Consensus 185 ~IiS~kD~~~p~l~d~~~~~ 204 (225)
T 1upi_A 185 PSLSDRDAAAPSFEDVRASG 204 (225)
T ss_dssp CBCCHHHHTCCCHHHHHHTT
T ss_pred CEECHHHCCCCCHHHHHHCC
T ss_conf 68798993998989997679