HHsearch results for GI: 254780919 and protein with PDBid: 3d0j_A

>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=95.25  E-value=0.044  Score=31.27  Aligned_cols=112  Identities=13%  Similarity=0.068  Sum_probs=65.7

Q ss_pred             EECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEE---CCCCCCCCCHHHHEEECHHHHHHHHHHCCC
Q ss_conf             70762203795042110889898679987413442331252000000---015555544012100002222234334064
Q gi|254780919|r    9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRG---LHFQRPPYAQAKLVRCIAGRIFDIAVDIRR   85 (198)
Q Consensus         9 i~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRG---lH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~   85 (198)
                      .+|..++..+..|..+|..+.       ...++.++  .. ..-+-|   ||++...   +-.++|++|++..++-+...
T Consensus         4 ~~~~~~~~~~~g~~~l~~~e~-------~~Vk~l~~--~p-~~~ls~~~~lQ~H~~r---dE~w~Vl~G~~~v~~~~~~~   70 (140)
T 3d0j_A            4 MKPDIYENNREGILCVYKNEK-------WLVCIKNW--KP-DNDIEGIAHLEIHHST---DEQFILSAGKAILITAEKEN   70 (140)
T ss_dssp             CCCCCCCCCSSSEEEEEECSS-------EEEEEEEC--CG-GGBTTTCCEEEEESSC---CEEEEEEESCEEEEEEEEET
T ss_pred             CCCCEEECCCCCEEEEEECCC-------EEEEEEEE--CC-CCCCCCCCCCEECCCC---CCEEEEEECEEEEEEECCCC
T ss_conf             675228827971899994995-------89999998--88-9977888352357883---67999995959999804676


Q ss_pred             CHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf             21333100113662365302333023220345307453389721787671017
Q gi|254780919|r   86 NSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD  138 (198)
Q Consensus        86 ~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e  138 (198)
                         +-.......|.+  +.++.||+|.+|-..+.++..+++--.++.+..+.+
T Consensus        71 ---~~~~~~~~~l~~--Gd~~~IP~G~~Hr~~~~~d~~lliIE~s~t~~~d~d  118 (140)
T 3d0j_A           71 ---DKFNIELTLMEK--GKVYNVPAECWFYSITQKDTKMMYVQDSNCSMDNSD  118 (140)
T ss_dssp             ---TEEEEEEEECCT--TCCEEECTTCEEEEEECTTCEEEEEEESCCCGGGEE
T ss_pred             ---CCCCCCEEEECC--CCEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCC
T ss_conf             ---445650898359--967985699857433899973999992697149985