HHsearch results for GI: 254780919 and protein with PDBid: 3d0j_A
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=95.25 E-value=0.044 Score=31.27 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=65.7
Q ss_pred EECCEEEECCCEEEEEECHHHHHHCCCCCCEEEEEEEECCCCCEEEE---CCCCCCCCCHHHHEEECHHHHHHHHHHCCC
Q ss_conf 70762203795042110889898679987413442331252000000---015555544012100002222234334064
Q gi|254780919|r 9 LKTRKFEDSRGWFSQTYSSKLLKELGLQDVFVQDNHSFSFDCGTIRG---LHFQRPPYAQAKLVRCIAGRIFDIAVDIRR 85 (198)
Q Consensus 9 i~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~Q~n~S~s~~kgvlRG---lH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~ 85 (198)
.+|..++..+..|..+|..+. ...++.++ .. ..-+-| ||++... +-.++|++|++..++-+...
T Consensus 4 ~~~~~~~~~~~g~~~l~~~e~-------~~Vk~l~~--~p-~~~ls~~~~lQ~H~~r---dE~w~Vl~G~~~v~~~~~~~ 70 (140)
T 3d0j_A 4 MKPDIYENNREGILCVYKNEK-------WLVCIKNW--KP-DNDIEGIAHLEIHHST---DEQFILSAGKAILITAEKEN 70 (140)
T ss_dssp CCCCCCCCCSSSEEEEEECSS-------EEEEEEEC--CG-GGBTTTCCEEEEESSC---CEEEEEEESCEEEEEEEEET
T ss_pred CCCCEEECCCCCEEEEEECCC-------EEEEEEEE--CC-CCCCCCCCCCEECCCC---CCEEEEEECEEEEEEECCCC
T ss_conf 675228827971899994995-------89999998--88-9977888352357883---67999995959999804676
Q ss_pred CHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHC
Q ss_conf 21333100113662365302333023220345307453389721787671017
Q gi|254780919|r 86 NSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHD 138 (198)
Q Consensus 86 ~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e 138 (198)
+-.......|.+ +.++.||+|.+|-..+.++..+++--.++.+..+.+
T Consensus 71 ---~~~~~~~~~l~~--Gd~~~IP~G~~Hr~~~~~d~~lliIE~s~t~~~d~d 118 (140)
T 3d0j_A 71 ---DKFNIELTLMEK--GKVYNVPAECWFYSITQKDTKMMYVQDSNCSMDNSD 118 (140)
T ss_dssp ---TEEEEEEEECCT--TCCEEECTTCEEEEEECTTCEEEEEEESCCCGGGEE
T ss_pred ---CCCCCCEEEECC--CCEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCC
T ss_conf ---445650898359--967985699857433899973999992697149985