HHSEARCH alignment of GI: 254780919 and SCOP domain: d1o4ta_

Alignment

Probab=92.51  E-value=0.05  Score=29.53  Aligned_cols=59  Identities=19%  Similarity=0.190  Sum_probs=42.9

Q ss_pred             CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCC
Q ss_conf             200000001555554401210000222223433406421333100113662365302333023220345307453
Q gi|254780919|r   49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNT  123 (198)
Q Consensus        49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~  123 (198)
                      .+|.-.++|.+..   +..++++++|+.... +|        ++  .+.+.+  +..++||+|..|++...+|..
T Consensus        47 ~PG~~~~~H~H~~---~~E~~~vl~G~~~~~-~~--------~~--~~~l~~--Gd~~~ip~g~~H~~~N~g~~~  105 (115)
T d1o4ta_          47 PPGSSVGLHKHEG---EFEIYYILLGEGVFH-DN--------GK--DVPIKA--GDVCFTDSGESHSIENTGNTD  105 (115)
T ss_dssp             CTTCEEEEEECCS---EEEEEEEEESEEEEE-ET--------TE--EEEEET--TEEEEECTTCEEEEECCSSSC
T ss_pred             CCCCCCCCEECCC---CCEEEEEEECCCEEE-EC--------CE--EEEEEC--CEEEEECCCCEEEEEECCCCC
T ss_conf             9998768799999---829999998954699-86--------70--489404--479998998949989999999

SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: TM1287-like
domain: Hypothetical protein TM1287
species: Thermotoga maritima [TaxId: 2336]