HHSEARCH alignment of GI: 254780919 and SCOP domain: d1od5a2

Alignment
>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]}
Probab=94.41  E-value=0.019  Score=31.93  Aligned_cols=68  Identities=15%  Similarity=0.117  Sum_probs=47.9

Q ss_pred             CCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEE
Q ss_conf             200000001555554401210000222223433406421333100113662365302333023220345307453389
Q gi|254780919|r   49 DCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVI  126 (198)
Q Consensus        49 ~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~  126 (198)
                      ++|.++..|++..   -+.+++|++|+...-+|+--.     .+.+...|.+  +..++||.|++|--+.-.+...+.
T Consensus        55 ~pga~~~PH~H~~---A~ei~yV~~G~~~v~~v~~~~-----~~~~~~~l~~--Gdv~~iP~G~~h~~~n~~~~~~~v  122 (173)
T d1od5a2          55 YRNGIYSPHWNLN---ANSVIYVTRGKGRVRVVNCQG-----NAVFDGELRR--GQLLVVPQNFVVAEQGGEQGLEYV  122 (173)
T ss_dssp             CTTCEEEEEEESS---CCEEEEEEEEEEEEEEECTTS-----CEEEEEEEET--TCEEEECTTCEEEEEEEEEEEEEE
T ss_pred             CCCCEECCCCCCC---CCEEEEEEECCEEEEEEECCC-----CEEEEEEECC--CCEEEECCCCEEEEECCCCCEEEE
T ss_conf             6896706765998---749999996656899995898-----6577678439--828998899779997289863899


SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]