HHSEARCH alignment of GI: 254780919 and SCOP domain: d1uika2

Alignment
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]}
Probab=94.99  E-value=0.014  Score=32.78  Aligned_cols=106  Identities=15%  Similarity=0.096  Sum_probs=66.9

Q ss_pred             CEEEECCCEEEEEECHH--HHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCH--
Q ss_conf             62203795042110889--89867998741344233125200000001555554401210000222223433406421--
Q gi|254780919|r   12 RKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNS--   87 (198)
Q Consensus        12 ~~f~D~RG~f~e~f~~~--~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~S--   87 (198)
                      ..|.-+-|.+.+....+  .++.++  ......    +.++|.++..||+...   +.+++|++|+...-+|+....+  
T Consensus        17 p~~~n~~G~~~~~~~~~~p~L~~~~--v~~~~~----~l~p~~~~~Ph~h~~A---~~i~~V~~G~g~v~~v~~~~~~~~   87 (185)
T d1uika2          17 PIYSNKLGKLFEITPEKNPQLRDLD--VFLSVV----DMNEGALFLPHFNSKA---IVVLVINEGEANIELVGIKEQQQR   87 (185)
T ss_dssp             CSEESSSEEEEEECTTTCHHHHHHT--EEEEEE----EECTTEEEEEEEESSC---EEEEEEEESCEEEEEEEC------
T ss_pred             CCEECCCCEEEEECHHHCHHHHHCC--CHHHEE----ECCCCCEEEEEECCCC---CEEEEEEEEEEEEEEECCCCCCHH
T ss_conf             9603799759996710191330257--621010----1378963465415899---989999964788988706864001


Q ss_pred             ------HHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf             ------333100113662365302333023220345307453389721
Q gi|254780919|r   88 ------PTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKV  129 (198)
Q Consensus        88 ------pTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~  129 (198)
                            +.-.+.....|.  .+..+.||+|++|-.+..+| ..+++..
T Consensus        88 ~~~~~~~~~~~~~~~~l~--~GDv~viP~G~~~~~~n~~d-~~~v~~~  132 (185)
T d1uika2          88 QQQEEQPLEVRKYRAELS--EQDIFVIPAGYPVVVNATSD-LNFFAFG  132 (185)
T ss_dssp             ------CBCCEEEEEEEC--TTCEEEECTTCCEEEEESSS-EEEEEEE
T ss_pred             HCCCCCCCCCEEEEEEEC--CCCEEEECCCCEEEEECCCC-CCEEEEE
T ss_conf             102345676346888864--88689988997899981899-3089999


SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Germin/Seed storage 7S protein
domain: Seed storage 7S protein
species: Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]