HHSEARCH alignment of GI: 254780919 and SCOP domain: d2ixca1

Alignment
>d2ixca1 b.82.1.1 (A:1-198) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=410.56  Aligned_cols=178  Identities=32%  Similarity=0.608  Sum_probs=170.4

Q ss_pred             CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf             965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r    1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI   79 (198)
Q Consensus         1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv   79 (198)
                      ++|+||+++++++|.|+||+|.|+|+.++++++ +.++.|+|+|+|.| +||||||||||.+|++|+|||+|++|+|+||
T Consensus         6 ~~I~Gv~~i~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~~Q~n~S~S-~kgvlRGlH~q~~~~~q~Klv~~i~G~I~dv   84 (198)
T d2ixca1           6 LDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVS-SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDV   84 (198)
T ss_dssp             CSSTTEEEEECCCEEETTEEEEEEEEHHHHHHHHSSCCCCCEEEEEEE-CTTBEEEEEEECTTTCCCEEEEEEESEEEEE
T ss_pred             CCCCCEEEEECCEEECCCCCEEEEECHHHHHHHHCCCCCCEEEEEEEE-EHHHHEEEEEECCCCHHHHHHHHHHCEEEEE
T ss_conf             448966999797067689686780007888874255865301134420-0433133355126512454543210217999


Q ss_pred             HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf             33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r   80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL  159 (198)
Q Consensus        80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~  159 (198)
                      +||+|++|||||++..++|+++++++|+||+||||||+||+++|+++|+||++|+|++|.||+|+||.|+|+||+.+...
T Consensus        85 vvDlR~~S~Tfgk~~~~~L~~~~~~~i~IP~G~aHGf~~L~~~~~i~Y~~s~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~  164 (198)
T d2ixca1          85 VVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAA  164 (198)
T ss_dssp             EECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESSCCCTTTEEECCTTCTTTCCCCCCSSSSC
T ss_pred             EEECCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98324665648817999811477534897499679998606854430136776298888122578821285798988878


Q ss_pred             CEECHHHHCCCCHHHCCCCC
Q ss_conf             30167884599877818551
Q gi|254780919|r  160 PSVSEKDQNLPFLNQIDSPF  179 (198)
Q Consensus       160 piiS~kD~~~p~l~d~~~~f  179 (198)
                      ||||+||+++|+|+|+++..
T Consensus       165 ~ilS~kD~~~~~l~~~~~~~  184 (198)
T d2ixca1         165 PSLSDRDAAAPSFEDVRASG  184 (198)
T ss_dssp             CBCCHHHHTCCCHHHHHHHT
T ss_pred             CEECHHHCCCCCHHHHHHCC
T ss_conf             78898992999989998669


SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: dTDP-sugar isomerase
domain: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
species: Mycobacterium tuberculosis [TaxId: 1773]