HHSEARCH alignment of GI: 254780919 and SCOP domain: d2ixha1

Alignment
>d2ixha1 b.82.1.1 (A:1-184) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00  E-value=0  Score=403.62  Aligned_cols=172  Identities=46%  Similarity=0.825  Sum_probs=164.3

Q ss_pred             CCCCCEEEEECCEEEECCCEEEEEECHHHHHHC-CCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHH
Q ss_conf             965753997076220379504211088989867-9987413442331252000000015555544012100002222234
Q gi|254780919|r    1 MNINPVRILKTRKFEDSRGWFSQTYSSKLLKEL-GLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDI   79 (198)
Q Consensus         1 L~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~-~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dv   79 (198)
                      |+|+||++++++.|.|+||+|.|+|+.+++.+. +.++.|+|+|+|.| +|||+||||||.+ .+|+|||+|++|+|+||
T Consensus         9 ~~I~gv~ii~~~~f~D~RG~f~e~f~~~~~~~~~~~~~~~~q~n~S~s-~kgvlRG~H~q~~-~~q~Klv~~i~G~I~dv   86 (184)
T d2ixha1           9 LAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRS-ARGVLRGLHYQIR-QAQGKLVRATLGEVFDV   86 (184)
T ss_dssp             CSSTTCEEEEECCEEETTEEECCSCCHHHHHHHHSSCCCCCEEEEEEE-ETTBEEEEEEESS-SCCCEEEEEEESEEEEE
T ss_pred             CCCCCEEEEECCEEECCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEC-CCCCEEEEEECCC-CHHHEECCEEEEEEEEE
T ss_conf             789977999896176698268776157899985398743114228870-4570688897333-12120000013589999


Q ss_pred             HHHCCCCHHHHHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCHHCEECCCCCCCCCCCCCCCCCCC
Q ss_conf             33406421333100113662365302333023220345307453389721787671017021688801177478887676
Q gi|254780919|r   80 AVDIRRNSPTYGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVTDFYSVEHDSGVAWQDKSIDITWPLLDTIL  159 (198)
Q Consensus        80 vvDlR~~SpTfgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~~~y~p~~e~~i~~~Dp~l~i~Wp~~~~~~  159 (198)
                      +||+|++|||||+|..++|+++++++|+||+||||||+||+|+|+++|+++++|+|++|.||+|+||.|+|+||+.++  
T Consensus        87 vvDlR~~S~Tfgk~~~~~L~~~~~~~l~IP~G~aHGf~~L~~~~~v~Y~~s~~y~~~~e~~i~~~Dp~l~i~Wp~~~~--  164 (184)
T d2ixha1          87 AVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQDA--  164 (184)
T ss_dssp             EEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEESSCCCGGGEEEBCTTCTTTCCCCCCSSC--
T ss_pred             EEECCCCCCCCCCEEEEEECCCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCC--
T ss_conf             840456799888367754035676279956981789885389049991445666814653672799121877999997--


Q ss_pred             CEECHHHHCCCCHHHCC
Q ss_conf             30167884599877818
Q gi|254780919|r  160 PSVSEKDQNLPFLNQID  176 (198)
Q Consensus       160 piiS~kD~~~p~l~d~~  176 (198)
                      ||||+||+++|.|+|++
T Consensus       165 ~ilS~kD~~~p~l~d~~  181 (184)
T d2ixha1         165 PLLSEKDRQGKAFADAD  181 (184)
T ss_dssp             CBCCHHHHTCBCGGGSC
T ss_pred             CEECHHHCCCCCHHHCC
T ss_conf             56558893998825346


SCOP domain information

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: dTDP-sugar isomerase
domain: dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
species: Pseudomonas aeruginosa [TaxId: 287]