HHSEARCH alignment of GI: 254780919 and SCOP domain: g1dgw.1

Alignment

Probab=96.51  E-value=0.0026  Score=36.95  Aligned_cols=103  Identities=17%  Similarity=0.163  Sum_probs=67.0

Q ss_pred             CEEEECCCEEEEEECHH--HHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHEEECHHHHHHHHHHCCCCHHH
Q ss_conf             62203795042110889--8986799874134423312520000000155555440121000022222343340642133
Q gi|254780919|r   12 RKFEDSRGWFSQTYSSK--LLKELGLQDVFVQDNHSFSFDCGTIRGLHFQRPPYAQAKLVRCIAGRIFDIAVDIRRNSPT   89 (198)
Q Consensus        12 ~~f~D~RG~f~e~f~~~--~~~~~~~~~~~~Q~n~S~s~~kgvlRGlH~Q~~p~~Q~Klv~ci~G~I~dvvvDlR~~SpT   89 (198)
                      ..|+.+-|++.+....+  .++..  ......  ..+  ++|.++.+|++..-   +++++|++|+....+|+....   
T Consensus        11 p~~~n~~G~~~~~~~~~~p~L~~~--~~~~~~--~~l--~pg~~~~pH~h~~a---~e~~~V~~G~~~~~~v~~~~~---   78 (168)
T g1dgw.1          11 PIYSNNYGKLYEITPEKNSQLRDL--DILLNC--LQM--NEGALFVPHYNSRA---TVILVANEGRAEVELVGLEQL---   78 (168)
T ss_dssp             CSEECSSEEEEEECTTTCHHHHTT--TEEEEE--EEE--CTTCEEEEEEESSC---EEEEEEEESCEEEEEEEECCE---
T ss_pred             CCCCCCCCEEEEECHHHCHHHCCC--CCEEEE--EEE--CCCCEEEEEECCCC---CEEEEEEEEEEEEEEEECCCC---
T ss_conf             953889967999773439123434--640599--998--69965203676888---899999951699999816886---


Q ss_pred             HHHEEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf             31001136623653023330232203453074533897217
Q gi|254780919|r   90 YGCWVSLEISANNGLQIYIPTGFAHGFMTLEMNTEVIYKVT  130 (198)
Q Consensus        90 fgk~~~~~Ls~~~~~~l~IP~G~aHGf~~L~d~~~i~Y~~~  130 (198)
                        +.+...|.+  +..++||.|++|-....++...+...++
T Consensus        79 --~~~~~~l~~--Gdv~~iP~G~~~~~~n~~~~~~~~~~~~  115 (168)
T g1dgw.1          79 --RRYAATLSE--GDIIVIPSSFPVALKAASDLNMVGIGVN  115 (168)
T ss_dssp             --EEEEEEECT--TCEEEECTTCCEEEEESSSEEEEEEEES
T ss_pred             --EEEEEEECC--CCEEEECCCCEEEEECCCCCEEEEEEEC
T ss_conf             --589887379--8699998998899980899608999987

SCOP domain information

class:
fold:
superfamily:
family:
domain:
species: