HHsearch alignment for GI: 254780920 and conserved domain: COG0451
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=100.00 E-value=0 Score=335.66 Aligned_cols=303 Identities=31% Similarity=0.484 Sum_probs=248.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 94899767882779999999986898799994788765856777620379749997638899999999862278717851
Q gi|254780920|r 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNF 80 (358)
Q Consensus 1 MkILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~~~~d~ViHl 80 (358)
T Consensus 1 ~~iLVtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~ 71 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGVP-DAVIHL 71 (314)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCCCCCC-------CCCCEEECCCCCHHHHHHHHCCCC-CEEEEC
T ss_conf 96999928877799999999858-997999917875431124-------676434225335678998854588-789988
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC-CCCCCCCC-CCCCCCCCC
Q ss_conf 23433222222-2222222222222024788865123221124784278630554311222-22222222-222222222
Q gi|254780920|r 81 AAESHVDRSIL-GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSED-MPYNPSSPY 157 (358)
Q Consensus 81 Aa~~~~~~~~~-~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~-~~~~~~E~-~~~~p~s~Y 157 (358)
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~---------~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Y 142 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA---------AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPY 142 (314)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------CCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHH
T ss_conf 8646775333214788999999999999999986---------7998799978750127887888878655788887677
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 33322100000012333222222222222233322222---222222222222222-22222223322113322220000
Q gi|254780920|r 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRAL 233 (358)
Q Consensus 158 g~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~---~~i~~~i~~~~~g~~-~~i~g~g~~~Rdfi~v~D~a~~i 233 (358)
T Consensus 143 g~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~ 222 (314)
T COG0451 143 GVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADAL 222 (314)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHHHHHH
T ss_conf 99999999999997663399579998463788898777420789999999870788503507886224257799999999
Q ss_pred EECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHCCCCCC-CCCCCCCEEECCCCCCCCCEECCCHHHHHHHHCCCCCC
Q ss_conf 0001222222211135786-420268899998860342655-56864302334889986530031718999981896610
Q gi|254780920|r 234 YLVLKKGRIGERYNIGGNN-ERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 (358)
Q Consensus 234 ~~~~~~~~~~~~fNigs~~-~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~K~~~~Lgw~p~~ 311 (358)
T Consensus 223 ~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~lg~~p~~ 295 (314)
T COG0451 223 LLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL------GRRGDLREGKLLDISKARAALGWEPKV 295 (314)
T ss_pred HHHHHCCCCC-EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC------CCHHHHCCCCCCCHHHHHHHHCCCCCC
T ss_conf 9997388871-899469877768999999999984887542010343------220010134326879999971997889
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 89999999999998867
Q gi|254780920|r 312 NMESGLNKTVCWYLDNN 328 (358)
Q Consensus 312 ~l~egi~~~i~w~~~n~ 328 (358)
T Consensus 296 ~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 296 SLEEGLADTLEWLLKKL 312 (314)
T ss_pred CHHHHHHHHHHHHHHHC
T ss_conf 98999999999998631