HHsearch alignment for GI: 254780920 and conserved domain: COG1660
>COG1660 Predicted P-loop-containing kinase [General function prediction only].
Probab=94.09 E-value=0.16 Score=28.51 Aligned_cols=78 Identities=22% Similarity=0.242 Sum_probs=48.4
Q ss_pred CE-EEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH--HHHC--CCCEEEEECCCCCHHHHHHHHH-----
Q ss_conf 94-899767882779999999986898799994788765856777--6203--7974999763889999999986-----
Q gi|254780920|r 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQ--SNLFSFLQVDICDRECIRSALK----- 70 (358)
Q Consensus 1 Mk-ILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~--~~~~--~~~v~~i~~Di~d~~~l~~~~~----- 70 (358)
T Consensus 1 m~lvIVTGlSG-AGKsvAl~~lEDlGy--ycvDNLPp~Llp~~~~~~~~~~~~~~kv-Av~iDiRs~~~~~~l~~~l~~l 76 (286)
T COG1660 1 MRLVIVTGLSG-AGKSVALRVLEDLGY--YCVDNLPPQLLPKLADLMLTLESRITKV-AVVIDVRSREFFGDLEEVLDEL 76 (286)
T ss_pred CCEEEEECCCC-CCHHHHHHHHHHCCE--EEECCCCHHHHHHHHHHHHHCCCCCCEE-EEEEECCCCHHHHHHHHHHHHH
T ss_conf 94699956888-768899999974580--4535899889999999976305677527-9999614503178899999999
Q ss_pred -HC---CCCEEEEECC
Q ss_conf -22---7871785123
Q gi|254780920|r 71 -EF---QPDAIVNFAA 82 (358)
Q Consensus 71 -~~---~~d~ViHlAa 82 (358)
T Consensus 77 ~~~~~~~~~iLFLeA~ 92 (286)
T COG1660 77 KDNGDIDPRVLFLEAD 92 (286)
T ss_pred HHCCCCCCEEEEEECC
T ss_conf 8557987249999786