HHsearch alignment for GI: 254780920 and conserved domain: PRK12481
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional.
Probab=99.44 E-value=1.4e-13 Score=102.29 Aligned_cols=223 Identities=14% Similarity=0.120 Sum_probs=140.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH-----CCCCE
Q ss_conf 4899767882779999999986898799994788765856777620379749997638899999999862-----27871
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKE-----FQPDA 76 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~-----~~~d~ 76 (358)
T Consensus 10 valVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~--~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 86 (251)
T PRK12481 10 VAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVE--ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHH--HCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 8999486768999999999986-99999978987199999999--75994799991279999999999999998199989
Q ss_pred EEEECCCCCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 785123433222----2222222222222222024788865123221124784278630554311222222222222222
Q gi|254780920|r 77 IVNFAAESHVDR----SILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN 152 (358)
Q Consensus 77 ViHlAa~~~~~~----~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~~~~E~~~~~ 152 (358)
T Consensus 87 lVNNAG~~~~~~~~~~~~~~w~~~~~vNl~~~~~~~q~~~~~m----~~~~~~G~IVnisS~~~~~~~-----------~ 151 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQF----VKQGNGGKIINIASMLSFQGG-----------I 151 (251)
T ss_pred EEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCEEEEECCHHHCCCC-----------C
T ss_conf 9989989999990349999999999998377999999999999----985699348740213333688-----------9
Q ss_pred CCCCCCCCCCCCEEEECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2222233322100000012333---2222222222222333222222222222222222222222222332211332222
Q gi|254780920|r 153 PSSPYSATKASSDYLVLAWGHT---YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 (358)
Q Consensus 153 p~s~Yg~sK~~~E~~~~~~~~~---~~l~~~ilR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~i~g~g~~~Rdfi~v~D~ 229 (358)
T Consensus 152 ~~~~Y~asKaav~~ltr~lA~e~a~~gIrVN~IaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl---------~R~g~pedi 222 (251)
T PRK12481 152 RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA---------SRWGTPDDL 222 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCCC---------CCCCCHHHH
T ss_conf 87147999999999999999997030969999952888777521103799999999955999---------998689999
Q ss_pred CCCEEECCCC---CCCCCCCCCCCC
Q ss_conf 0000000122---222221113578
Q gi|254780920|r 230 VRALYLVLKK---GRIGERYNIGGN 251 (358)
Q Consensus 230 a~~i~~~~~~---~~~~~~fNigs~ 251 (358)
T Consensus 223 a~~v~fL~S~~a~~iTG~~i~VDGG 247 (251)
T PRK12481 223 AGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHCCHHCCCCCCEEEECCC
T ss_conf 9999999382535904855897846