HHsearch alignment for GI: 254780920 and conserved domain: TIGR01777
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=100.00 E-value=6.4e-34 Score=226.65 Aligned_cols=295 Identities=21% Similarity=0.270 Sum_probs=196.2
Q ss_pred EEEECC-CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 899767-8827799999999868987999947887658567776203797499976388999999998622787178512
Q gi|254780920|r 3 LIVTGG-AGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFA 81 (358)
Q Consensus 3 ILItG~-tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~~~~d~ViHlA 81 (358)
T Consensus 1 ~litGgnTGfiG~~L~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-W-~~l~~--~DaviNLA 75 (307)
T TIGR01777 1 ILITGGNTGFIGRALTQRLT-KSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAESG-W-SALEG--ADAVINLA 75 (307)
T ss_pred CEECCCCCCHHHHHHHHHHH-HCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHC-C-CCCCC--CCEEEECC
T ss_conf 96415330237899999998-47998999961686432000255445555221245207220-5-66788--62798556
Q ss_pred CCCCCC-CCCC--CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 343322-2222--2222222222222024788865123221124784278630554311222222222222222222223
Q gi|254780920|r 82 AESHVD-RSIL--GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYS 158 (358)
Q Consensus 82 a~~~~~-~~~~--~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~~~~E~~~~~p~s~Yg 158 (358)
T Consensus 76 G~~i~~P~RWt~~~K~~i~~SRi~~T~~L~~~i~~~~r----~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~~~~ddF- 150 (307)
T TIGR01777 76 GEPIADPKRWTEERKQEIRDSRIDTTRALVEAIAAAPR----AEQKPKVFISASAVGYYGHSEDRVFTEEDASGPGDDF- 150 (307)
T ss_pred CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC----CCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCC-
T ss_conf 88857788878777575652334789999999984656----6788716885016663068998215116678887772-
Q ss_pred CCCCCCEEEEC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 33221000000-12333222222222222233322-22222222222222222222222223322113322220000000
Q gi|254780920|r 159 ATKASSDYLVL-AWGHTYGIPVLLSNCSNNYGPYH-FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 (358)
Q Consensus 159 ~sK~~~E~~~~-~~~~~~~l~~~ilR~~~vyGp~~-~~~~~i~~~i~~~~~g~~~~i~g~g~~~Rdfi~v~D~a~~i~~~ 236 (358)
T Consensus 151 la~lc~~WE~~A~~a~~~g~Rvv~~R~G~VLg~~GGaL~~m~~p--f~~glGGpl---G~G~Q~~SWIH~~D~v~~I~~~ 225 (307)
T TIGR01777 151 LAELCRDWEEAAQAAEQLGTRVVLLRTGIVLGPKGGALAKMLPP--FRLGLGGPL---GSGRQWFSWIHIEDLVQLILFA 225 (307)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHH--HHHHCCCCC---CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 18999999998510533687389876413470898703454566--765157423---6884145053588999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEECCC-----HHHHHHHHCCCCCC
Q ss_conf 1222222211135786420268899998860342655568643023348899865300317-----18999981896610
Q gi|254780920|r 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID-----SSKIKSEIGWFPQE 311 (358)
Q Consensus 237 ~~~~~~~~~fNigs~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~K~~~~Lgw~p~~ 311 (358)
T Consensus 226 l~~~~~~Gp~N~tAP~Pv~n~~F~~~la~~l~RP~~~~vP~-~~~~~---~LGe~a~~~L~gQrV~P~kl~~-~GF~F~Y 300 (307)
T TIGR01777 226 LENASVSGPVNATAPEPVRNKEFAKALARALHRPAFLPVPA-FVLRL---LLGEMADLLLKGQRVLPEKLLE-AGFQFQY 300 (307)
T ss_pred HHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHH-CCCEEEC
T ss_conf 85589963254107886357899999999818970101108-99998---8425588898657899999997-4976621
Q ss_pred C-HHHHH
Q ss_conf 8-99999
Q gi|254780920|r 312 N-MESGL 317 (358)
Q Consensus 312 ~-l~egi 317 (358)
T Consensus 301 ~~l~~AL 307 (307)
T TIGR01777 301 PDLDEAL 307 (307)
T ss_pred CCCCCCC
T ss_conf 3320249