HHsearch alignment for GI: 254780920 and conserved domain: TIGR02356
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=95.88 E-value=0.07 Score=30.79 Aligned_cols=78 Identities=18% Similarity=0.357 Sum_probs=46.4
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCC-CC----------------------HHHHHHHHCCCCEEEEECC
Q ss_conf 489976788277999999998689879999478876-58----------------------5677762037974999763
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GN----------------------LNSLKEISQSNLFSFLQVD 58 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~-~~----------------------~~~~~~~~~~~~v~~i~~D 58 (358)
T Consensus 23 ~VLiiGaGg-LGs~~~~~LA~AGVG~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN~~i~v~a~~~~ 101 (210)
T TIGR02356 23 HVLIIGAGG-LGSPAALYLAAAGVGTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELNSDIRVTALKER 101 (210)
T ss_pred CEEEEEECH-HHHHHHHHHHHCCCCEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 659997261-4568999998288837899851677010120554303244201315899999999853889689985420
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 88999999998622787178512
Q gi|254780920|r 59 ICDRECIRSALKEFQPDAIVNFA 81 (358)
Q Consensus 59 i~d~~~l~~~~~~~~~d~ViHlA 81 (358)
T Consensus 102 v-t~~~~~~~i~~~DPdlVlDc~ 123 (210)
T TIGR02356 102 V-TAENLELLIENVDPDLVLDCT 123 (210)
T ss_pred C-CHHHHHHHHHCCCCCEEEECC
T ss_conf 2-779999996238996896156