HHsearch alignment for GI: 254780920 and conserved domain: cd00650
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.26 E-value=0.0058 Score=37.37 Aligned_cols=170 Identities=14% Similarity=0.077 Sum_probs=79.2
Q ss_pred EEEECCCCHHHHHHHHHHHHHC---CCEEEEEECCCCC--CCHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHHCCCCE
Q ss_conf 8997678827799999999868---9879999478876--585677762037-974999763889999999986227871
Q gi|254780920|r 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYA--GNLNSLKEISQS-NLFSFLQVDICDRECIRSALKEFQPDA 76 (358)
Q Consensus 3 ILItG~tGfIGs~l~~~Ll~~~---~~~V~~~d~~~~~--~~~~~~~~~~~~-~~v~~i~~Di~d~~~l~~~~~~~~~d~ 76 (358)
T Consensus 1 V~IIGA~G~VG~~~a~~l~~~~~~~~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~v~~~~-----~~~~~~~d--aDv 73 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD-----DPYEAFKD--ADV 73 (263)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECC-----CHHHHHCC--CCE
T ss_conf 98987797799999999982899999889999589872087999998545235787399748-----73898379--989
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78512343322222222222222222220247888651232211247842786305543112222222222222222222
Q gi|254780920|r 77 IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP 156 (358)
Q Consensus 77 ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~~~~E~~~~~p~s~ 156 (358)
T Consensus 74 VVitag~~~--k~g~~R~dll~~N~~I~~~i~~~i~~~--------~p~a~iivvtN-Pv--dv~t~~~~~~sg~p~~~v 140 (263)
T cd00650 74 VIITAGVGR--KPGMGRLDLLKRNVPIVKEIGDNIEKY--------SPDAWIIVVSN-PV--DIITYLVWRYSGLPKEKV 140 (263)
T ss_pred EEEECCCCC--CCCCCHHHHHHCHHHHHHHHHHHHHHC--------CCCCEEEECCC-CH--HHHHHHHHHHCCCCCCCE
T ss_conf 999057788--999876566403288999998888732--------99836997389-48--999999998359983028
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2333221000000123332222222222222333222
Q gi|254780920|r 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 (358)
Q Consensus 157 Yg~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~ 193 (358)
T Consensus 141 iG~gtLDs~R~~~~la~~l~v~~~~V~-~~V~GeHg~ 176 (263)
T cd00650 141 IGLGTLDPIRFRRILAEKLGVDPDDVK-VYILGEHGG 176 (263)
T ss_pred EEEECCHHHHHHHHHHHHHCCCHHHEE-EEEEECCCC
T ss_conf 986324788999999998597978968-999937879