HHsearch alignment for GI: 254780920 and conserved domain: cd00704

>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.79  E-value=2.1e-05  Score=52.31  Aligned_cols=196  Identities=14%  Similarity=0.082  Sum_probs=94.8

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHC--C----CEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf             948997678827799999999868--9----8799994788765856777620379749997638899999999862278
Q gi|254780920|r    1 MRLIVTGGAGFIGSALCRYLVNDL--K----IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQP   74 (358)
Q Consensus         1 MkILItG~tGfIGs~l~~~Ll~~~--~----~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~~~~   74 (358)
T Consensus         1 ~KV~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~~~~-~~v~~~~~~~~~~~~--a   77 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLL-KGVVITTDPEEAFKD--V   77 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC-CCEEECCCHHHHHCC--C
T ss_conf             9899989997899999999972863699860089997588865553148786653466555-874842885898379--9


Q ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCC---CCCCCCCCCCCCCCCCC
Q ss_conf             717851234332222222222222222222024788865123221124784278630554---31122222222222222
Q gi|254780920|r   75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTD---EVYGSLDKGLFSEDMPY  151 (358)
Q Consensus        75 d~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~---~vYg~~~~~~~~E~~~~  151 (358)
T Consensus        78 DvViitaG~prkp--G~tR~DLl~~N~~I~k~~~~~i~~~a-------~p~~~vivvsNPvD~~~~-----v~~k~sg~~  143 (323)
T cd00704          78 DVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVA-------KPTVKVLVVGNPANTNAL-----IALKNAPNL  143 (323)
T ss_pred             CEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHC-------CCCCEEEEECCCCHHHHH-----HHHHHCCCC
T ss_conf             8899827878899--98279999874899999999998517-------998389995786468999-----999976999


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2222223332210000001233322222222222223332222222222222222222222222
Q gi|254780920|r  152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG  215 (358)
Q Consensus       152 ~p~s~Yg~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~i~g  215 (358)
T Consensus       144 ~~~~i~~~t~LDsaR~r~~la~~l~v~~~~V~~~iI~GeHG--ds~vp~~s~a~V~G~p~~~~~  205 (323)
T cd00704         144 PPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHS--NTQVPDLSNAVVYGPGGTEWV  205 (323)
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHHHCCCHHHCEEEEEEECCC--CCEEECCCCCEECCCCHHHHH
T ss_conf             82479996527999999999999783978927879998786--867863010889877067863