HHsearch alignment for GI: 254780920 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.46 E-value=0.013 Score=35.23 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=46.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 48997678827799999999868987999947887658567776-20379749997638899999999862278717851
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNF 80 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~~~V~~~d~~~~~~~~~~~~~-~~~~~~v~~i~~Di~d~~~l~~~~~~~~~d~ViHl 80 (358)
T Consensus 30 ~~~V~G~tG~vG~~~A~~lA~~-Ga~v~lv~R~--~ek~~~~a~~i~~r~g~~~~~~~~~~~~~~~~~l~~a--diV~~a 104 (194)
T cd01078 30 TAVVLGGTGPVGQRAAVLLARE-GARVVLVGRD--LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGA--DVVFAA 104 (194)
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECC--HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC--CEEEEC
T ss_conf 8999858857899999999983-9979999587--8889999999999709873113578877899774669--899964
Q ss_pred C
Q ss_conf 2
Q gi|254780920|r 81 A 81 (358)
Q Consensus 81 A 81 (358)
T Consensus 105 ~ 105 (194)
T cd01078 105 G 105 (194)
T ss_pred C
T ss_conf 2