HHsearch alignment for GI: 254780920 and conserved domain: cd01336
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.30 E-value=0.0005 Score=43.89 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=86.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHHH--CC----CEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 94899767882779999999986--89----8799994788765856777620379749997638899999999862278
Q gi|254780920|r 1 MRLIVTGGAGFIGSALCRYLVND--LK----IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQP 74 (358)
Q Consensus 1 MkILItG~tGfIGs~l~~~Ll~~--~~----~~V~~~d~~~~~~~~~~~~~~~~~~~v~~i~~Di~d~~~l~~~~~~~~~ 74 (358)
T Consensus 3 ~kV~VtGAaG~Ig~~l~~~la~g~~~g~~~~i~L~L~Di~~~~~~l~Gv~mel~d~a~p~-l~~i~~~~~~~~a~~~--a 79 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPL-LKSVVATTDPEEAFKD--V 79 (325)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHCCCCC-CCCEEECCCHHHHHCC--C
T ss_conf 199998887188999999997588568997059999667786776552674574378645-5873522887898368--8
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 717851234332222222222222222222024788865123221124784278630554311222222222222-2222
Q gi|254780920|r 75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNP 153 (358)
Q Consensus 75 d~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~~~~E~~-~~~p 153 (358)
T Consensus 80 Dvvii~ag~prkp--GmtR~DLl~~Na~I~k~~~~~I~~~------a~p~-~~viVv~NP-v--n~~~~i~~~~a~~~p~ 147 (325)
T cd01336 80 DVAILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKY------AKKN-VKVLVVGNP-A--NTNALILLKYAPSIPK 147 (325)
T ss_pred CEEEEECCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH------CCCC-EEEEEECCC-H--HHHHHHHHHHCCCCCH
T ss_conf 7899948877999--9827999998999999999999986------1458-199992793-5--8899999997799966
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222233322100000012333222222222222233322222222222
Q gi|254780920|r 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLA 201 (358)
Q Consensus 154 ~s~Yg~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~i~~~ 201 (358)
T Consensus 148 ~~i~~~t~LD~~R~~~~lA~kl~v~~~~V~~~iIwG~Hg--~t~vP~~ 193 (325)
T cd01336 148 ENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHS--STQYPDV 193 (325)
T ss_pred HHEEEEEHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCC--CCEEECC
T ss_conf 849984289999999999998598967846679998798--9678630