HHsearch alignment for GI: 254780920 and conserved domain: cd05295
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.26 E-value=0.071 Score=30.74 Aligned_cols=202 Identities=12% Similarity=0.079 Sum_probs=92.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCC----CEEEEEECCCCCCCHHHHHHH---HCCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 489976788277999999998689----879999478876585677762---0379749997638899999999862278
Q gi|254780920|r 2 RLIVTGGAGFIGSALCRYLVNDLK----IQVLVIDKLTYAGNLNSLKEI---SQSNLFSFLQVDICDRECIRSALKEFQP 74 (358)
Q Consensus 2 kILItG~tGfIGs~l~~~Ll~~~~----~~V~~~d~~~~~~~~~~~~~~---~~~~~v~~i~~Di~d~~~l~~~~~~~~~ 74 (358)
T Consensus 125 ~V~VTgAag~iaYsLi~~la-sGevFG~d~~i~L~LlDip~~~e~L~Gv~MELeDcAfPlL~-~v~~t~d~~~AF~da-- 200 (452)
T cd05295 125 QVCITNASAPLCYHLIPSLA-SGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLR-GISVTTDLDVAFKDA-- 200 (452)
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCCCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHCCCCCC-CEEEECCHHHHHCCC--
T ss_conf 69994684476899999973-76734898717999547740778863633567653440017-106767999985579--
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCC-CC
Q ss_conf 717851234332222222222222222222024788865123221124784278630554311222222-2222222-22
Q gi|254780920|r 75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMP-YN 152 (358)
Q Consensus 75 d~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nil~~~~~~~~~~~~~~~~~~~~v~~SS~~vYg~~~~~-~~~E~~~-~~ 152 (358)
T Consensus 201 d~ailvga~pr~~-g-mer~dlL~~n~~IF-------~~qG~aln~~Ak~~vKVLVvG~nPa---NtNalI~~~~Ap~Ip 268 (452)
T cd05295 201 HVIVLLDDFLIKE-G-EDLEGCIRSRVAIC-------QLYGPLIEKNAKEDVKVIVAGRTFL---NLKTSILIKYAPSIP 268 (452)
T ss_pred CEEEEECCCCCCC-C-CCHHHHHHHHHHHH-------HHHHHHHHHHCCCCCEEEEECCCCC---CHHHHHHHHHCCCCC
T ss_conf 8899958847888-8-71889999877999-------9999999854456866999678865---168899997589997
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222223332210000001233322222222222223332222222222222222222222222223322
Q gi|254780920|r 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 (358)
Q Consensus 153 p~s~Yg~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~i~g~g~~~R 221 (358)
T Consensus 269 ~~Nf~AmtrLD~NRA~aqlA~Klgv~~~~VknviIWGNHS~--TqyPD~~~A~V~~~~~ai~gp~~~~~ 335 (452)
T cd05295 269 RKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG--NTYIDLSKARVYRYDSAIWGPPNYSR 335 (452)
T ss_pred HHHEEEEHHHHHHHHHHHHHHHHCCCHHHCEEEEEEECCCC--CCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf 57635102766668999999883998777325489856878--82786653389364643346765566