BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780920|ref|YP_003065333.1| dTDP-glucose 4,6-dehydratase [Candidatus Liberibacter asiaticus str. psy62] (358 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780920|ref|YP_003065333.1| dTDP-glucose 4,6-dehydratase [Candidatus Liberibacter asiaticus str. psy62] gi|254040597|gb|ACT57393.1| dTDP-glucose 4,6-dehydratase [Candidatus Liberibacter asiaticus str. psy62] Length = 358 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC Sbjct: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ Sbjct: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL Sbjct: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG Sbjct: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK Sbjct: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNRK 358 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNRK Sbjct: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNRK 358 >gi|315122654|ref|YP_004063143.1| dTDP-glucose 4,6-dehydratase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496056|gb|ADR52655.1| dTDP-glucose 4,6-dehydratase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 348 Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/342 (82%), Positives = 309/342 (90%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+IVTGGAGFIGSALCRYL+NDLKIQVLVIDKLTYAGNL+SLK+ISQS+LFSFLQ DIC Sbjct: 1 MRIIVTGGAGFIGSALCRYLINDLKIQVLVIDKLTYAGNLDSLKQISQSDLFSFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE IR ALKEFQPDAI+N AAESHVDRSI+G+DEFI TNI+GTF+LLEETRLWWSCL Sbjct: 61 DRESIRLALKEFQPDAIMNLAAESHVDRSIMGSDEFIATNIMGTFVLLEETRLWWSCLPG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KKD FRFLQ+STDEVYGSLD+GLFSED PY PSSPYSATKASSDYL LAW TYGIP+L Sbjct: 121 YKKDHFRFLQVSTDEVYGSLDEGLFSEDNPYCPSSPYSATKASSDYLALAWQCTYGIPIL 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGPY FPEKLIPLAITRMI+GSHVFLYGDG+NVRDWLYVEDHVRALYLVL KG Sbjct: 181 LSNCSNNYGPYQFPEKLIPLAITRMIKGSHVFLYGDGKNVRDWLYVEDHVRALYLVLTKG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 RIGERYNIGGNNER+NIDIVF+I LLD L PK Y H++L+ F +DR GHDRRYAID SK Sbjct: 241 RIGERYNIGGNNERENIDIVFQICHLLDVLHPKPYPHSDLVLFTKDRLGHDRRYAIDFSK 300 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 IK E+GW+PQEN +SGL+KTV WYLDN+WWW PLYKEL N Sbjct: 301 IKKELGWYPQENKDSGLDKTVHWYLDNSWWWHPLYKELNLSN 342 >gi|315499262|ref|YP_004088066.1| dtdp-glucose 4,6-dehydratase [Asticcacaulis excentricus CB 48] gi|315417274|gb|ADU13915.1| dTDP-glucose 4,6-dehydratase [Asticcacaulis excentricus CB 48] Length = 352 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 207/335 (61%), Positives = 263/335 (78%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+++ +VL +DKLTYAGNL SL+ I+ +N +SF+Q DIC Sbjct: 1 MRILVTGGAGFIGSALVRYLVSEVGAEVLNLDKLTYAGNLASLEPIAGANNYSFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE + +A+ F+PD I++ AAESHVDRSI GA EF+ TN+IGTF +LE R +W+ LS Sbjct: 61 AREAVVAAINGFKPDHIMHLAAESHVDRSITGAGEFVQTNVIGTFTMLEAARHYWNGLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FRFL +STDEVYGSL + GLF E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 121 DDKANFRFLHVSTDEVYGSLGETGLFEEVTPYDPSSPYSASKAASDHLAKAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YGDG N+RDWLYVEDH RAL+L+ K Sbjct: 181 IVSNCSNNYGPFHFPEKLIPLNILNALEGKALTVYGDGSNIRDWLYVEDHARALHLIASK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE YN+GG NERKNID+V I L+D + P+ H LI F+ DRPGHD RYAID++ Sbjct: 241 GRLGETYNVGGRNERKNIDVVHRICALMDEMHPQGAPHDRLITFVTDRPGHDHRYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW +EN ++G+ KTV WYLDN WWRPL Sbjct: 301 KLETELGWKARENFDTGIEKTVRWYLDNEQWWRPL 335 >gi|154247481|ref|YP_001418439.1| dTDP-glucose 4,6-dehydratase [Xanthobacter autotrophicus Py2] gi|154161566|gb|ABS68782.1| dTDP-glucose 4,6-dehydratase [Xanthobacter autotrophicus Py2] Length = 355 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 205/339 (60%), Positives = 265/339 (78%), Gaps = 1/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+++ +VL +DKLTYAGNL SLK I + + FLQ DI Sbjct: 1 MRILVTGGAGFIGSALVRYLVSEVGAEVLNVDKLTYAGNLASLKVIENAPNYRFLQADIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + AL F+PD I++ AAESHVDRSI GA EF+ TN++GTF LLE R +WS L Sbjct: 61 DRAAMSEALASFKPDRIMHLAAESHVDRSITGAGEFVHTNVVGTFTLLEAARHYWSELPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+ FRFL +STDEVYGSL + GLF E PY+PSSPYSA+KA+SD+LV+AW TYG+PV Sbjct: 121 AEKEAFRFLHVSTDEVYGSLGEDGLFEEVTPYDPSSPYSASKAASDHLVVAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL+L+ Sbjct: 181 VVSNCSNNYGPYHFPEKLIPLTILNALEGRTLPVYGNGANIRDWLYVEDHARALHLIASN 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE+YN+GG NER+NI++V I L+D L PK+ SH +LI F+ DRPGHD RYAID++ Sbjct: 241 GRLGEKYNVGGRNERRNIEVVRRICDLMDELAPKATSHHDLITFVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 K+++E+GW +E ++G+ TV WYLDN WWW+PL +++ Sbjct: 301 KLETELGWKARETFDTGIANTVKWYLDNAWWWQPLREKV 339 >gi|159186243|ref|NP_356045.2| dTDP-D-glucose-4,6-dehydratase [Agrobacterium tumefaciens str. C58] gi|159141377|gb|AAK88830.2| dTDP-D-glucose-4,6-dehydratase [Agrobacterium tumefaciens str. C58] Length = 351 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 205/335 (61%), Positives = 257/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+++ VL +DKLTYAGNL SLK I + FLQ DIC Sbjct: 1 MRVLVTGGAGFIGSALVRYLVSEVGADVLTVDKLTYAGNLASLKPIENAPNHRFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A FQPD +++ AAESHVDRSI GA +FI TNI GTF +LE R +WS L+ Sbjct: 61 DRAAMNDAFATFQPDYVMHLAAESHVDRSITGAADFIQTNINGTFTMLEAARQYWSSLAD 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FR L +STDEVYGSL D GLF E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 121 DAKANFRMLHVSTDEVYGSLGDDGLFEETTPYDPSSPYSASKAASDHLATAWQRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL+L+++K Sbjct: 181 VISNCSNNYGPFHFPEKLIPLIILNALEGKPLPVYGNGANIRDWLYVEDHARALWLIVQK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE+YN+GG NE+KNID+V I +LD L P+S + LI+++ DRPGHD RYAID++ Sbjct: 241 GLAGEKYNVGGRNEQKNIDVVNCICSILDELRPQSKPYANLIQYVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW QEN +G+ KTV WYLDN WWW+PL Sbjct: 301 KLETELGWKAQENFATGIRKTVEWYLDNAWWWQPL 335 >gi|332715609|ref|YP_004443075.1| dTDP-D-glucose-4,6-dehydratase [Agrobacterium sp. H13-3] gi|325062294|gb|ADY65984.1| dTDP-D-glucose-4,6-dehydratase [Agrobacterium sp. H13-3] Length = 352 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 203/335 (60%), Positives = 257/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+++ VL +DKLTYAGNL SLK I + FLQ DIC Sbjct: 2 MRVLVTGGAGFIGSALVRYLVSEVGADVLTVDKLTYAGNLASLKPIENAPNHRFLQADIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A FQPD +++ AAESHVDRSI GA +FI TNI GTF +LE R +W+ L++ Sbjct: 62 DRAAMNDAFATFQPDYVMHLAAESHVDRSITGAADFIQTNINGTFTMLEAARQYWNGLAE 121 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FR L +STDEVYGSL + GLF E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 122 DAKSAFRMLHVSTDEVYGSLGEHGLFEETTPYDPSSPYSASKAASDHLATAWQRTYGLPV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL+L+++ Sbjct: 182 VISNCSNNYGPFHFPEKLIPLIILNALEGKPLPVYGNGANIRDWLYVEDHARALWLIVQT 241 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE+YN+GG NE+KNID+V I +LD L P+S + ELI+++ DRPGHD RYAID++ Sbjct: 242 GLAGEKYNVGGRNEQKNIDVVNCICSILDELRPQSKPYAELIKYVTDRPGHDARYAIDAT 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW QEN +G+ KTV WYLDN WWW PL Sbjct: 302 KLETELGWKAQENFATGIRKTVEWYLDNEWWWEPL 336 >gi|11385992|gb|AAG35060.1|AF314183_2 dTDP-glucose-4,6-dehydratase [Agrobacterium tumefaciens] Length = 351 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 204/335 (60%), Positives = 256/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+++ VL +DKLTYAGNL SLK I + FLQ DIC Sbjct: 1 MRVLVTGGAGFIGSALVRYLVSEVGADVLTVDKLTYAGNLASLKPIENAPNHRFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A FQPD +++ AAESHVDRSI GA +FI TNI GTF +LE R +WS L+ Sbjct: 61 DRAAMNDAFATFQPDYVMHLAAESHVDRSITGAADFIQTNINGTFTMLEAARQYWSSLAD 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FR L +STDEVYGSL D GLF E PY+PSSPYSA+KA+SD+L AW TYG+P Sbjct: 121 DAKANFRMLHVSTDEVYGSLGDDGLFEETTPYDPSSPYSASKAASDHLATAWQRTYGLPF 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL+L+++K Sbjct: 181 VISNCSNNYGPFHFPEKLIPLIILNALEGKPLPVYGNGANIRDWLYVEDHARALWLIVQK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE+YN+GG NE+KNID+V I +LD L P+S + LI+++ DRPGHD RYAID++ Sbjct: 241 GLAGEKYNVGGRNEQKNIDVVNCICSILDELRPQSKPYANLIQYVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW QEN +G+ KTV WYLDN WWW+PL Sbjct: 301 KLETELGWKAQENFATGIRKTVEWYLDNAWWWQPL 335 >gi|254500114|ref|ZP_05112266.1| dTDP-glucose 4,6-dehydratase [Labrenzia alexandrii DFL-11] gi|222441412|gb|EEE48090.1| dTDP-glucose 4,6-dehydratase [Labrenzia alexandrii DFL-11] Length = 350 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 198/334 (59%), Positives = 260/334 (77%), Gaps = 1/334 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+IVTGGAGFIGSA+ R+LV ++ +VL IDKLTYAGNL+SL+E+ + FL+ DIC Sbjct: 3 RVIVTGGAGFIGSAVVRHLVRNVGAEVLTIDKLTYAGNLDSLREVDNAPNHKFLKEDICA 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A+ EFQPD I++ AAESHVDRSI GA EF+ TN++GT +LE R +W+ L + Sbjct: 63 GPEMIQAVAEFQPDYIMHLAAESHVDRSITGAAEFVQTNVVGTMAMLEAARAYWNSLEGE 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KKD FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV+ Sbjct: 123 KKDSFRFLHVSTDEVYGSLGDEGLFKETTPYDPSSPYSASKAASDHLAIAWHRTYGLPVV 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGPYHFPEKLIPL I ++G + +YG G NVRDWLYV+DH +ALY ++ KG Sbjct: 183 LSNCSNNYGPYHFPEKLIPLMILNALDGQPLPIYGTGMNVRDWLYVDDHAKALYTIVSKG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 R+GE+YN+GG NER N+++V I +LD PK+ H LI ++EDRPGHD RYAID++K Sbjct: 243 RLGEKYNVGGRNERTNLEVVKTICAILDKHSPKTAPHDRLITYVEDRPGHDARYAIDATK 302 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++E+GW +EN ++G+ KT+ WYL+N+WWW PL Sbjct: 303 LETELGWRAEENFDTGIEKTIKWYLENDWWWGPL 336 >gi|222148115|ref|YP_002549072.1| dTDP-D-glucose-46-dehydratase [Agrobacterium vitis S4] gi|221735103|gb|ACM36066.1| dTDP-D-glucose-46-dehydratase [Agrobacterium vitis S4] Length = 352 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 197/335 (58%), Positives = 257/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ R+LV + VL +DKLTYAG L SLK + + L+ FLQ DIC Sbjct: 1 MRVLVTGGAGFIGSAVVRHLVLEKGYDVLNVDKLTYAGTLTSLKSVEANPLYRFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I SA F+PD +++ AAESHVDRSI GA +F+ TN++GTF +LE R +W L Sbjct: 61 DGQAIASAFASFKPDRVMHLAAESHVDRSITGAKDFVETNVLGTFTMLECARAYWQGLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KD FRFL +STDEVYGSL D+GLF+E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 121 ASKDGFRFLHVSTDEVYGSLGDEGLFTETTPYDPSSPYSASKAASDHLAKAWARTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL ++ ++ Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMIINAMEGKPLPVYGNGANIRDWLYVEDHARALDIIAER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+IGE YN+GG NER+NID+V + L+D L P H +LI+++ DRPGHD RYAID++ Sbjct: 241 GQIGETYNVGGRNERRNIDVVTRVCALMDELHPSGTPHEKLIQYVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++++E+GW QEN E+G+ KTV WYL+N WWW PL Sbjct: 301 RLETELGWKAQENFETGIEKTVKWYLENRWWWEPL 335 >gi|116251391|ref|YP_767229.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. viciae 3841] gi|115256039|emb|CAK07120.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. viciae 3841] Length = 351 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 201/339 (59%), Positives = 257/339 (75%), Gaps = 1/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR +R A F+PD +++ AAESHVDRSI GAD+FI TNI+GTF LL+ R +W L Sbjct: 61 DRARMREAFASFRPDIVMHLAAESHVDRSISGADDFIQTNIVGTFSLLDAARHYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RYKSDFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALFTIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGRNERRNIDVVHRICAILDGVYDNKEPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 K++SE+GW QE E+G+ KTV WYL+N WWWRPL +++ Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPLREKV 339 >gi|222148465|ref|YP_002549422.1| dTDP-glucose 4,6-dehydratase [Agrobacterium vitis S4] gi|221735453|gb|ACM36416.1| dTDP-glucose 4,6-dehydratase [Agrobacterium vitis S4] Length = 352 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 196/335 (58%), Positives = 257/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ R+LV + VL +DKLTYAG L SLK + + L+ FLQ DIC Sbjct: 1 MRVLVTGGAGFIGSAVVRHLVLEKGYDVLNVDKLTYAGTLTSLKSVEANPLYRFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I SA F+PD +++ AAESHVDRSI GA +F+ TN++GTF +LE R +W L Sbjct: 61 DGQAIASAFASFKPDRVMHLAAESHVDRSITGAKDFVETNVLGTFTMLECARAYWQGLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KD FRFL +STDEVYGSL D+GLF+E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 121 ASKDGFRFLHVSTDEVYGSLGDEGLFTETTPYDPSSPYSASKAASDHLAKAWARTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G N+RDWLYVEDH RAL ++ ++ Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMIINAMEGKPLPVYGNGANIRDWLYVEDHARALDIIAER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+IGE YN+GG NER+NI++V + L+D L P H +LI+++ DRPGHD RYAID++ Sbjct: 241 GQIGETYNVGGRNERRNIEVVTRVCALMDGLHPSDTPHEKLIQYVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++++E+GW QEN E+G+ KTV WYL+N WWW PL Sbjct: 301 RLETELGWKAQENFETGIEKTVKWYLENRWWWEPL 335 >gi|209548786|ref|YP_002280703.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534542|gb|ACI54477.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 351 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 200/339 (58%), Positives = 257/339 (75%), Gaps = 1/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A F+PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ RL+W L Sbjct: 61 DRTGMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARLYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 PRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGVNVRDWLYVEDHARALFTIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGCNERRNIDVVHRICAILDGVFSDKAPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 K++SE+GW QE E+G+ KTV WYL+N WWWRPL + + Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPLRENI 339 >gi|110349045|gb|ABG73089.1| RfbB [Rhizobium leguminosarum bv. trifolii TA1] Length = 351 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 200/335 (59%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A F+PD +++ AAESHVDRSILGA +FI TNI+GTF LL+ R +W L Sbjct: 61 DRARMQEAFASFRPDIVMHLAAESHVDRSILGAADFIQTNIVGTFSLLDTARHYWDELDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPIYGNGANVRDWLYVEDHARALFTIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGRNERRNIDVVHRICAILDGVYSDRGPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYL+N WWWRPL Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPL 335 >gi|327188680|gb|EGE55883.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CNPAF512] Length = 351 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 199/335 (59%), Positives = 252/335 (75%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGN SLK + ++ + FL DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNRASLKSVESASNYQFLHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A F PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L Sbjct: 61 DRARMQEAFASFGPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RRKSAFRFLHVSTDEVYGSLGDQGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RALY + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYSIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR G++YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGDKYNVGGRNERRNIDVVHRICAILDGVYSDKAPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYLDN WWWRPL Sbjct: 301 KLESELGWEAQETFETGIEKTVHWYLDNEWWWRPL 335 >gi|218674077|ref|ZP_03523746.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium etli GR56] Length = 350 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 198/335 (59%), Positives = 254/335 (75%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R ++ A F+PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L Sbjct: 61 ERARMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 DGKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALFTIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID++ Sbjct: 241 GRPGEKYNVGGRNERRNIDVVHRICAILDGVYSDKAPHARLITNVTDRPGHDARYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYL+N WWWRPL Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPL 335 >gi|329848963|ref|ZP_08263991.1| dTDP-glucose 4,6-dehydratase [Asticcacaulis biprosthecum C19] gi|328844026|gb|EGF93595.1| dTDP-glucose 4,6-dehydratase [Asticcacaulis biprosthecum C19] Length = 350 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 198/335 (59%), Positives = 258/335 (77%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ RYLV+++ +VL +DKLTYAGNL SL + + + F++ DIC Sbjct: 1 MRILVTGGAGFIGSAVVRYLVSEVGAEVLNLDKLTYAGNLESLAPVEAAANYRFVKADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + SA+ F+PD I++ AAESHVDRSI GA +F+ TN++GTF LLE R +W+ L Sbjct: 61 DRDAVTSAINGFKPDHIMHLAAESHVDRSITGARDFVETNVMGTFTLLEGARHYWNGLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K +FRFL +STDEVYGSL + GLF E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 121 DAKGRFRFLHVSTDEVYGSLGETGLFEETTPYDPSSPYSASKAASDHLAKAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP HFPEKLIPL I ++G + +YGDG N+RDWLYV+DH RAL+L+ K Sbjct: 181 VVSNCSNNYGPCHFPEKLIPLNILNALDGKPLPVYGDGSNIRDWLYVDDHARALHLICSK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE YN+GG NER NID+V I L+D L PK+ H +LI ++ DRPGHD RYAID++ Sbjct: 241 GRLGETYNVGGRNERTNIDVVRRICALMDQLRPKNTPHEQLITYVTDRPGHDHRYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW QE ++G+ KTV WYLDN WW PL Sbjct: 301 KLETELGWKAQETFDTGIEKTVKWYLDNEAWWGPL 335 >gi|241204007|ref|YP_002975103.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857897|gb|ACS55564.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 351 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 199/335 (59%), Positives = 253/335 (75%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A F+PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L Sbjct: 61 DRVGMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALFTIASS 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGRNERRNIDVVHRICVILDGVCSDKGPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYL+N WWWRPL Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPL 335 >gi|190891198|ref|YP_001977740.1| dTDP-glucose-4,6-dehydratase [Rhizobium etli CIAT 652] gi|190696477|gb|ACE90562.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CIAT 652] Length = 351 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 199/335 (59%), Positives = 249/335 (74%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGN SLK + + + FL DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNRASLKSVESAPNYQFLHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A F+PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L Sbjct: 61 DRARMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RGKSAFRFLHVSTDEVYGSLGDQGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RALY + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYSIAST 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+ ID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGRNERRTIDVVHRICAILDGVHSDKAPHARLITNVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYLDN WWWRPL Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLDNEWWWRPL 335 >gi|317048791|ref|YP_004116439.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. At-9b] gi|316950408|gb|ADU69883.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. At-9b] Length = 359 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 252/338 (74%), Gaps = 8/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++N+ +V+ +DKLTYAGNL SL +SQS +SF +VDIC Sbjct: 1 MKILITGGAGFIGSAVVRHIINNTNDEVINVDKLTYAGNLESLDAVSQSERYSFKKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +++ EF PDA+++ AAESHVDRSI G EF+ TN++GT+ LLE +R +WS L Sbjct: 61 DGAALQAVFNEFAPDAVMHLAAESHVDRSITGPAEFVQTNVVGTYALLEASRQYWSALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 DKK FRF ISTDEVYG L + LF+E PY PSSPYS+TKA+SD+LV AWG Sbjct: 121 DKKAAFRFHHISTDEVYGDLPHPDEMAGELPLFTETTPYAPSSPYSSTKAASDHLVRAWG 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+PV+++NCSNNYGPYHFPEKLIPL I+ +EG + +YG G +RDWLYVEDH RA Sbjct: 181 RTYGLPVIVTNCSNNYGPYHFPEKLIPLIISNALEGKPLPIYGKGDQIRDWLYVEDHARA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY V+ K G YNIGG+NE+KN+D+V ++ LLD L PK ++ E I +++DRPGHDR Sbjct: 241 LYTVVTKAATGTTYNIGGHNEKKNLDVVLKVCELLDELRPKETAYAEQIVYVQDRPGHDR 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID+ KIK E+GW PQE ESGL KTV WYL N W Sbjct: 301 RYAIDADKIKKELGWSPQETFESGLRKTVEWYLHNQTW 338 >gi|326385994|ref|ZP_08207618.1| dTDP-D-glucose-46-dehydratase [Novosphingobium nitrogenifigens DSM 19370] gi|326209219|gb|EGD60012.1| dTDP-D-glucose-46-dehydratase [Novosphingobium nitrogenifigens DSM 19370] Length = 359 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 197/335 (58%), Positives = 253/335 (75%), Gaps = 2/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGFIGSAL RYLV + +VL +DKLTYAGNL+SL ++ + FL+ DIC Sbjct: 3 LRVLVTGGAGFIGSALVRYLVLERGAEVLNVDKLTYAGNLSSLTAVADDPRYRFLRADIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R A + F+PD +++ AAESHVDRSI GA +FI TN++GTF LLE R +WS L Sbjct: 63 DASAMREAFETFRPDRVMHLAAESHVDRSITGAADFINTNVVGTFQLLEAARDYWSKLDG 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRFL +STDEVYGSL D GLF E PY+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 123 GAREAFRFLHVSTDEVYGSLGDTGLFHETTPYDPSSPYSASKAASDHLAKAWQRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL I + G + +YG G+N+RDWLYVEDH RAL L+ Sbjct: 183 VVSNCSNNYGPYHFPEKLIPLTILNALHGRPLPVYGKGENIRDWLYVEDHARALDLIAAS 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YN+GG NER+NID+V I +LD L+ H +LI F+ DRPGHD RYAID++ Sbjct: 243 GQVGETYNVGGRNERRNIDVVTRICEILDRLV-GGRRHADLIEFVTDRPGHDARYAIDAT 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++++E+GW QE E+G+ KTV WY+DN WWWRPL Sbjct: 302 RLETELGWKAQETFETGIEKTVRWYIDNAWWWRPL 336 >gi|308187471|ref|YP_003931602.1| dTDP-glucose 4,6 dehydratase [Pantoea vagans C9-1] gi|308057981|gb|ADO10153.1| dTDP-glucose 4,6 dehydratase [Pantoea vagans C9-1] Length = 359 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 257/338 (76%), Gaps = 8/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++N+ +V+ +DKLTYAGNL SLKE+S + ++F Q+DIC Sbjct: 1 MKILITGGAGFIGSAVVRHVINNTNDEVINVDKLTYAGNLESLKEVSSNPRYTFRQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I AL EFQPDAI++ AAESHVDRSI G EF+ TN++GT+ +LE R +WS L + Sbjct: 61 DGQAIAEALSEFQPDAIMHLAAESHVDRSITGPAEFVQTNVVGTYAMLEAARQYWSALPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 ++K FRF ISTDEVYG L D LF+E+ PY PSSPYS+TKA+SD+LV AWG Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEMDGDLPLFTEETPYAPSSPYSSTKAASDHLVRAWG 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +PV+++NCSNNYGPYHFPEKLIPL I+ +EG + +YG G +RDWLYVEDH RA Sbjct: 181 RTYKLPVIVTNCSNNYGPYHFPEKLIPLIISNALEGKPLPIYGKGDQIRDWLYVEDHARA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY V+K G YNIGG+NE KNID+V ++ LLD L PK+ + + I +++DRPGHDR Sbjct: 241 LYTVVKNAETGTTYNIGGHNEMKNIDVVLKVCELLDQLRPKATPYRDQITYVQDRPGHDR 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID++KI+ ++GW P+E E+GL KTV WYL+N+ W Sbjct: 301 RYAIDAAKIEKDLGWKPEETFETGLKKTVEWYLNNSEW 338 >gi|86357152|ref|YP_469044.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CFN 42] gi|86281254|gb|ABC90317.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CFN 42] Length = 351 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/335 (58%), Positives = 249/335 (74%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+LV+++ +VL +D LTYAGN SLK + + + FL DIC Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNPASLKSVESAPNYQFLHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A F+P+ +++ AAESHVDRSI A +FI TNI+GTF LL+ R +W L Sbjct: 61 DRARMLEAFASFRPEIVMHLAAESHVDRSISSAADFIQTNIVGTFSLLDAARYYWDGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV Sbjct: 121 RDKSSFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RAL+ + + Sbjct: 181 VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALFTIASR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+S Sbjct: 241 GRPGEKYNVGGRNERRNIDVVHRICAILDGVYSDKAPHARLITKVTDRPGHDARYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++SE+GW QE E+G+ KTV WYL+N WWWRPL Sbjct: 301 KLESELGWKAQETFETGIEKTVHWYLENEWWWRPL 335 >gi|16519748|ref|NP_443868.1| dTDP-glucose 4,6-dehydratase RmlB [Sinorhizobium fredii NGR234] gi|2494671|sp|P55462|RFBB_RHISN RecName: Full=Probable dTDP-glucose 4,6-dehydratase gi|2182408|gb|AAB91680.1| dTDP-glucose 4,6-dehydratase RmlB [Sinorhizobium fredii NGR234] Length = 350 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 197/335 (58%), Positives = 259/335 (77%), Gaps = 2/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL RYLV+ + +VL +DKLTYAGNL SLK + + FL+ DIC Sbjct: 1 MRILVTGGAGFIGSALVRYLVS-INAEVLNVDKLTYAGNLASLKPVEGLRNYRFLRADIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I A + FQPD +++ AAESHVDRSI GAD+F+ TN+ GTF +LE R +WS LSQ Sbjct: 60 DRVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYWSNLSQ 119 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++K F+ L +STDEVYGSL D+G F E PY+PSSPYSA+KA+SD+ AW TYG+PV Sbjct: 120 NRKAFFKMLHVSTDEVYGSLGDRGQFEEVSPYDPSSPYSASKAASDHFATAWQRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I ++ + +YG G N+RDWLYV+DH RAL+L++++ Sbjct: 180 VISNCSNNYGPFHFPEKLIPLMILNALDRKPLPVYGTGSNIRDWLYVDDHARALWLIVRE 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE+YN+GG NE +NID+V I LLD L P + + +LI F++DRPGHD RYAID++ Sbjct: 240 GRPGEKYNVGGRNELRNIDVVNRICLLLDELSPNASHYGDLITFVKDRPGHDARYAIDAT 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++E+GW QEN ++G+ KTV WYL+N WWW+PL Sbjct: 300 KLETELGWKAQENFDTGIRKTVEWYLENGWWWQPL 334 >gi|161617039|ref|YP_001591004.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366403|gb|ABX70171.1| hypothetical protein SPAB_04867 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 355 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALGAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|16762208|ref|NP_457825.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143697|ref|NP_807039.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051692|ref|ZP_03344570.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426572|ref|ZP_03359322.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213648374|ref|ZP_03378427.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855008|ref|ZP_03383248.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289827390|ref|ZP_06546002.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25292366|pir||AH0921 UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504512|emb|CAD09394.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Typhi] gi|29139332|gb|AAO70899.1| UDP-N-acetylglucosamine epimerase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 355 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLEQVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|16767197|ref|NP_462812.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994617|ref|ZP_02575708.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197264413|ref|ZP_03164487.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|6960275|gb|AAF33465.1| 89% identity with E. coli dTDP-D-glucose-4,6-dehydratase (RFFG) (SP:P27830); contains similarity to Pfam family PF01370 (NAD dependent epimerase/dehydratase family), score=721.7, E=3.2e-213, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422490|gb|AAL22771.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197242668|gb|EDY25288.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205327551|gb|EDZ14315.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249050|emb|CBG26910.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996203|gb|ACY91088.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312915045|dbj|BAJ39019.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323132274|gb|ADX19704.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990762|gb|AEF09745.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 355 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVVNYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|204930251|ref|ZP_03221228.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320655|gb|EDZ05857.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 355 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVTQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|238912932|ref|ZP_04656769.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 355 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANETWWKPV 341 >gi|167553309|ref|ZP_02347059.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168238378|ref|ZP_02663436.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244973|ref|ZP_02669905.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263187|ref|ZP_02685160.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467662|ref|ZP_02701499.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194448537|ref|YP_002047942.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194737216|ref|YP_002116857.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251098|ref|YP_002148851.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|198245411|ref|YP_002217859.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387324|ref|ZP_03213936.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207859133|ref|YP_002245784.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194406841|gb|ACF67060.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194712718|gb|ACF91939.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630009|gb|EDX48669.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214801|gb|ACH52198.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288730|gb|EDY28105.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939927|gb|ACH77260.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604422|gb|EDZ02967.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322228|gb|EDZ10067.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336230|gb|EDZ22994.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348235|gb|EDZ34866.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710936|emb|CAR35302.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625645|gb|EGE31990.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 355 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|161505561|ref|YP_001572673.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866908|gb|ABX23531.1| hypothetical protein SARI_03731 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 355 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/339 (58%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTEATPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLIILNALAGKALPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|322613006|gb|EFY09957.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617406|gb|EFY14306.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625602|gb|EFY22424.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627025|gb|EFY23818.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631259|gb|EFY28022.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638292|gb|EFY34991.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642772|gb|EFY39359.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646986|gb|EFY43488.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650374|gb|EFY46787.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656336|gb|EFY52630.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657561|gb|EFY53831.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665972|gb|EFY62153.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666711|gb|EFY62888.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671046|gb|EFY67176.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679247|gb|EFY75299.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681651|gb|EFY77678.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686022|gb|EFY82010.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192648|gb|EFZ77876.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197845|gb|EFZ82976.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203734|gb|EFZ88755.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205391|gb|EFZ90365.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210762|gb|EFZ95638.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215928|gb|EGA00661.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221421|gb|EGA05839.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227320|gb|EGA11487.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231746|gb|EGA15857.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236161|gb|EGA20238.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239602|gb|EGA23650.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244302|gb|EGA28310.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249601|gb|EGA33513.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250307|gb|EGA34193.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256514|gb|EGA40245.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259788|gb|EGA43421.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265196|gb|EGA48694.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268375|gb|EGA51847.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 355 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 196/339 (57%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI ++GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARDLGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|168822976|ref|ZP_02834976.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340720|gb|EDZ27484.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088338|emb|CBY98098.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 355 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 196/339 (57%), Positives = 251/339 (74%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVTQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QP+++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPNSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|332345768|gb|AEE59102.1| dTDP-glucose 4,6-dehydratase RfbB [Escherichia coli UMNK88] Length = 355 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N++ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINEMSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P +++LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYSDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|215489117|ref|YP_002331548.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O127:H6 str. E2348/69] gi|312969483|ref|ZP_07783685.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 2362-75] gi|215267189|emb|CAS11637.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O127:H6 str. E2348/69] gi|312286030|gb|EFR13948.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 2362-75] Length = 355 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/337 (59%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNVLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P S +H +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHSVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANEIWWK 339 >gi|218692067|ref|YP_002400279.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ED1a] gi|218429631|emb|CAR10452.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ED1a] Length = 355 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|331660133|ref|ZP_08361069.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] gi|315296836|gb|EFU56125.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 16-3] gi|324007458|gb|EGB76677.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 57-2] gi|331052701|gb|EGI24736.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] Length = 355 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANEIWWK 339 >gi|331649613|ref|ZP_08350695.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] gi|330908090|gb|EGH36609.1| dTDP-glucose 4,6-dehydratase [Escherichia coli AA86] gi|331041483|gb|EGI13631.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] Length = 355 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTNDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|194438587|ref|ZP_03070675.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|253775586|ref|YP_003038417.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254039001|ref|ZP_04873052.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 1_1_43] gi|254163732|ref|YP_003046840.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B str. REL606] gi|300930048|ref|ZP_07145478.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] gi|194422391|gb|EDX38390.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|226838692|gb|EEH70720.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 1_1_43] gi|242379321|emb|CAQ34132.1| dTDP-glucose 4,6-dehydratase 2 [Escherichia coli BL21(DE3)] gi|253326630|gb|ACT31232.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975633|gb|ACT41304.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B str. REL606] gi|253979789|gb|ACT45459.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BL21(DE3)] gi|300462036|gb|EFK25529.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] gi|309704227|emb|CBJ03574.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ETEC H10407] gi|323934179|gb|EGB30610.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1520] gi|323959045|gb|EGB54714.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H489] gi|323969369|gb|EGB64668.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA007] Length = 355 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P +++LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYSDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|168234242|ref|ZP_02659300.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469035|ref|ZP_03075019.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455399|gb|EDX44238.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331797|gb|EDZ18561.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 355 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 196/339 (57%), Positives = 250/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+ W PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELDWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|194442418|ref|YP_002043159.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401081|gb|ACF61303.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 355 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 250/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVTQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++ P+++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYHPNSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|218699367|ref|YP_002406996.1| dTDP-glucose 4,6 dehydratase [Escherichia coli IAI39] gi|253773027|ref|YP_003035858.1| dTDP-glucose 4,6 dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162033|ref|YP_003045141.1| dTDP-glucose 4,6 dehydratase [Escherichia coli B str. REL606] gi|218369353|emb|CAR17111.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli IAI39] gi|224613064|dbj|BAH24283.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B] gi|242377693|emb|CAQ32453.1| RmlB, subunit of dTDP-glucose 4,6-dehydratase [Escherichia coli BL21(DE3)] gi|253324071|gb|ACT28673.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973934|gb|ACT39605.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli B str. REL606] gi|253978128|gb|ACT43798.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli BL21(DE3)] gi|281179140|dbj|BAI55470.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli SE15] Length = 361 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/340 (58%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EIS S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+VF I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|9957860|gb|AAG09534.1|AF279624_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 196/340 (57%), Positives = 251/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKANSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P EN ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLENFESGIRKTVEWYLANTQW 340 >gi|331655472|ref|ZP_08356465.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M718] gi|331046793|gb|EGI18877.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M718] Length = 355 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIAHELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|49176411|ref|YP_026255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. MG1655] gi|89110229|ref|AP_004009.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. W3110] gi|170083275|ref|YP_001732595.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. DH10B] gi|188493730|ref|ZP_03001000.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 53638] gi|238902868|ref|YP_002928664.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BW2952] gi|256026137|ref|ZP_05440002.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 4_1_40B] gi|293417254|ref|ZP_06659879.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] gi|293468106|ref|ZP_06664518.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B088] gi|300947353|ref|ZP_07161550.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|300955209|ref|ZP_07167604.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 175-1] gi|301029001|ref|ZP_07192158.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 196-1] gi|301646146|ref|ZP_07246045.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|307140489|ref|ZP_07499845.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] gi|307313635|ref|ZP_07593255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|331644522|ref|ZP_08345642.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] gi|55977781|sp|P27830|RMLB2_ECOLI RecName: Full=dTDP-glucose 4,6-dehydratase 2 gi|48994969|gb|AAT48213.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. MG1655] gi|85676260|dbj|BAE77510.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K12 substr. W3110] gi|169891110|gb|ACB04817.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. DH10B] gi|188488929|gb|EDU64032.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 53638] gi|238861015|gb|ACR63013.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BW2952] gi|260451366|gb|ACX41788.1| dTDP-glucose 4,6-dehydratase [Escherichia coli DH1] gi|291321484|gb|EFE60922.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B088] gi|291431022|gb|EFF04017.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] gi|299878044|gb|EFI86255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 196-1] gi|300317863|gb|EFJ67647.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 175-1] gi|300453039|gb|EFK16659.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|301075615|gb|EFK90421.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|306906616|gb|EFN37128.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|315063084|gb|ADT77411.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|315138367|dbj|BAJ45526.1| dTDP-glucose 4,6-dehydratase [Escherichia coli DH1] gi|315618513|gb|EFU99099.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 3431] gi|323380852|gb|ADX53120.1| dTDP-glucose 4,6-dehydratase [Escherichia coli KO11] gi|323938927|gb|EGB35146.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E482] gi|331036194|gb|EGI08429.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] Length = 355 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|91213310|ref|YP_543296.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UTI89] gi|117626048|ref|YP_859371.1| dTDP-glucose 4,6-dehydratase [Escherichia coli APEC O1] gi|218560854|ref|YP_002393767.1| dTDP-glucose 4,6-dehydratase [Escherichia coli S88] gi|237702798|ref|ZP_04533279.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 3_2_53FAA] gi|91074884|gb|ABE09765.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UTI89] gi|115515172|gb|ABJ03247.1| dTDP-glucose 4,6-dehydratase [Escherichia coli APEC O1] gi|218367623|emb|CAR05406.1| dTDP-glucose 4,6-dehydratase [Escherichia coli S88] gi|226902969|gb|EEH89228.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 3_2_53FAA] gi|294490800|gb|ADE89556.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IHE3034] gi|307628852|gb|ADN73156.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UM146] gi|315284661|gb|EFU44106.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 110-3] gi|323949328|gb|EGB45218.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H252] gi|323954102|gb|EGB49899.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H263] Length = 355 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCAATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|82546143|ref|YP_410090.1| dTDP-glucose 4,6-dehydratase [Shigella boydii Sb227] gi|81247554|gb|ABB68262.1| dTDP-glucose 4,6-dehydratase [Shigella boydii Sb227] gi|320176031|gb|EFW51100.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae CDC 74-1112] gi|320185450|gb|EFW60219.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri CDC 796-83] gi|332089034|gb|EGI94145.1| dTDP-glucose 4,6-dehydratase [Shigella boydii 3594-74] Length = 355 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|9957855|gb|AAG09530.1|AF279623_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQNTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAAITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEAGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLANTKW 340 >gi|298290101|ref|YP_003692040.1| dTDP-glucose 4,6-dehydratase [Starkeya novella DSM 506] gi|296926612|gb|ADH87421.1| dTDP-glucose 4,6-dehydratase [Starkeya novella DSM 506] Length = 354 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 200/337 (59%), Positives = 251/337 (74%), Gaps = 4/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGSA+ R LV + QVL DKLTYAGNL SL E+ SFLQ DIC Sbjct: 6 QRVLVTGGAGFIGSAVVRRLVRQGR-QVLTYDKLTYAGNLASLAEVHNLPGHSFLQADIC 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D R AL+ F+PD +++ AAESHVDRSI G +FI TNI+GT+ LL+E +W L Sbjct: 65 DGRAFREALESFRPDLVMHLAAESHVDRSIDGPGDFIATNIVGTYTLLDEALRYWRGLDA 124 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +FRF ISTDEV+G+L + GLF ED PY P+SPYSA+KA+SD+LV AW HTYG+PV Sbjct: 125 AAQKRFRFHHISTDEVFGTLGEDGLFREDTPYQPNSPYSASKAASDHLVRAWFHTYGLPV 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL I +EG+ + +YG G+NVRDWLYVEDH AL L+ + Sbjct: 185 VMSNCSNNYGPYHFPEKLIPLTILNALEGAPLPVYGKGENVRDWLYVEDHAAALELIATR 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 GR+GE YN+GG+NER+NID+V I ++D ++P K LIRF+ DRPGHD RYAID Sbjct: 245 GRLGESYNVGGSNERRNIDVVRTICAIMDRVVPDAKIGPRDALIRFVTDRPGHDARYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +SK+K+E+GW P+ + ESG+ KTV WYLDN WW PL Sbjct: 305 ASKLKTELGWVPEHDFESGIEKTVRWYLDNAAWWEPL 341 >gi|300939995|ref|ZP_07154622.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] gi|300455169|gb|EFK18662.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] Length = 355 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVIVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARTYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANEIWWK 339 >gi|26250527|ref|NP_756567.1| dTDP-glucose 4,6-dehydratase [Escherichia coli CFT073] gi|227888628|ref|ZP_04006433.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|300985799|ref|ZP_07177591.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|301047332|ref|ZP_07194417.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 185-1] gi|306815174|ref|ZP_07449327.1| dTDP-glucose 4,6-dehydratase [Escherichia coli NC101] gi|26110957|gb|AAN83141.1|AE016769_256 dTDP-glucose 4,6-dehydratase [Escherichia coli CFT073] gi|222035489|emb|CAP78234.1| dTDP-glucose 4,6-dehydratase [Escherichia coli LF82] gi|227834467|gb|EEJ44933.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|300300749|gb|EFJ57134.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 185-1] gi|300407950|gb|EFJ91488.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|305851543|gb|EFM51997.1| dTDP-glucose 4,6-dehydratase [Escherichia coli NC101] gi|307555915|gb|ADN48690.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ABU 83972] gi|312948344|gb|ADR29171.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O83:H1 str. NRG 857C] gi|315293127|gb|EFU52479.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 153-1] Length = 355 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|218701298|ref|YP_002408927.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI39] gi|218371284|emb|CAR19118.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI39] Length = 355 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARTYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANEIWWK 339 >gi|331665434|ref|ZP_08366333.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA143] gi|331057332|gb|EGI29321.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA143] Length = 355 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYHDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|281180838|dbj|BAI57168.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE15] Length = 355 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+D LTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDTLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|170683610|ref|YP_001746107.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SMS-3-5] gi|170521328|gb|ACB19506.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SMS-3-5] Length = 355 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARTYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|74314303|ref|YP_312722.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei Ss046] gi|73857780|gb|AAZ90487.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei Ss046] gi|323167538|gb|EFZ53244.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei 53G] gi|323173405|gb|EFZ59034.1| dTDP-glucose 4,6-dehydratase [Escherichia coli LT-68] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|301160442|emb|CBW19971.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321225447|gb|EFX50504.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 350 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICDR Sbjct: 1 MTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICDRAS 60 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D K Sbjct: 61 LERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDADAKA 120 Query: 125 QFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P L++ Sbjct: 121 AFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLVT 180 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ G + Sbjct: 181 NCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTNGAV 240 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAIDS 298 GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYAID+ Sbjct: 241 GETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVVNYHDLITFVDDRPGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 301 SKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 336 >gi|291285204|ref|YP_003502022.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|209753444|gb|ACI75029.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|290765077|gb|ADD59038.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|320660954|gb|EFX28397.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. USDA 5905] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNVLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|157155600|ref|YP_001465269.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E24377A] gi|191166067|ref|ZP_03027902.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] gi|256021469|ref|ZP_05435334.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] gi|260857805|ref|YP_003231696.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O26:H11 str. 11368] gi|260870514|ref|YP_003236916.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O111:H- str. 11128] gi|300818742|ref|ZP_07098949.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 107-1] gi|300923288|ref|ZP_07139337.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 182-1] gi|301325478|ref|ZP_07218961.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 78-1] gi|309796272|ref|ZP_07690682.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 145-7] gi|332282704|ref|ZP_08395117.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] gi|157077630|gb|ABV17338.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E24377A] gi|190903843|gb|EDV63557.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] gi|257756454|dbj|BAI27956.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O26:H11 str. 11368] gi|257766870|dbj|BAI38365.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O111:H- str. 11128] gi|300420433|gb|EFK03744.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 182-1] gi|300528708|gb|EFK49770.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 107-1] gi|300847705|gb|EFK75465.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 78-1] gi|308120154|gb|EFO57416.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 145-7] gi|323155190|gb|EFZ41374.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EPECa14] gi|323177798|gb|EFZ63382.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1180] gi|324115748|gb|EGC09683.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1167] gi|332105056|gb|EGJ08402.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|209921262|ref|YP_002295346.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE11] gi|218697506|ref|YP_002405173.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 55989] gi|300823320|ref|ZP_07103451.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300904040|ref|ZP_07121922.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 84-1] gi|301303683|ref|ZP_07209804.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 124-1] gi|331670633|ref|ZP_08371470.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] gi|331679897|ref|ZP_08380560.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] gi|209914521|dbj|BAG79595.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE11] gi|218354238|emb|CAV00899.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 55989] gi|300403992|gb|EFJ87530.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 84-1] gi|300524106|gb|EFK45175.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300840983|gb|EFK68743.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 124-1] gi|315254153|gb|EFU34121.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 85-1] gi|320198503|gb|EFW73104.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EC4100B] gi|323182561|gb|EFZ67965.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1357] gi|323943809|gb|EGB39904.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H120] gi|324016184|gb|EGB85403.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 117-3] gi|331062106|gb|EGI34028.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] gi|331072444|gb|EGI43776.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|293413232|ref|ZP_06655894.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B354] gi|291468180|gb|EFF10677.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B354] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G F+ TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|157163262|ref|YP_001460580.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|170022185|ref|YP_001727139.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|193066139|ref|ZP_03047194.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|193071043|ref|ZP_03051970.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E110019] gi|194429784|ref|ZP_03062299.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B171] gi|260846435|ref|YP_003224213.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O103:H2 str. 12009] gi|300921506|ref|ZP_07137850.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 115-1] gi|312971929|ref|ZP_07786103.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1827-70] gi|157068942|gb|ABV08197.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|169757113|gb|ACA79812.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|192926236|gb|EDV80875.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|192955630|gb|EDV86106.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E110019] gi|194412196|gb|EDX28503.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B171] gi|257761582|dbj|BAI33079.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O103:H2 str. 12009] gi|300411574|gb|EFJ94884.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 115-1] gi|310334306|gb|EFQ00511.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1827-70] gi|323161148|gb|EFZ47066.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E128010] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|331675258|ref|ZP_08376009.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA280] gi|331067544|gb|EGI38948.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA280] Length = 355 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G F+ TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|77460279|ref|YP_349786.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf0-1] gi|77384282|gb|ABA75795.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf0-1] Length = 358 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/334 (59%), Positives = 251/334 (75%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ V+ +DKLTYAGNL SL E+SQ + ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIISNTTDSVVNVDKLTYAGNLESLAEVSQDSRYAFERVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ I L+E QPDAI++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L Sbjct: 61 DRDQIDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGTYTLLEAARHYWAALDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 QRKAAFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWARTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++NI++V + LLD L P S H LI +++DRPGHD+RYAI Sbjct: 241 EGVIGETYNIGGHNEKQNIEVVNTLCALLDELRPDSAHRPHASLITYVQDRPGHDQRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E ESG+ KTV WYL N W Sbjct: 301 DASKIQRELGWTPEETFESGIRKTVEWYLSNTEW 334 >gi|110807522|ref|YP_691042.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 5 str. 8401] gi|110617070|gb|ABF05737.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 5 str. 8401] gi|332750987|gb|EGJ81392.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 4343-70] gi|332996849|gb|EGK16469.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri VA-6] gi|332997925|gb|EGK17532.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-218] gi|332998270|gb|EGK17872.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-272] gi|333013810|gb|EGK33173.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-227] Length = 355 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/337 (59%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P +H +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELASNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|226290771|gb|ACO40470.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dakar] gi|298353033|gb|ADI77012.1| RmlB [Salmonella enterica] Length = 361 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVIRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNVDVVFTICDLLDEIVPKAASYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|323189489|gb|EFZ74769.1| dTDP-glucose 4,6-dehydratase [Escherichia coli RN587/1] Length = 355 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALARYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|218707425|ref|YP_002414944.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UMN026] gi|293407418|ref|ZP_06651338.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1412] gi|298383158|ref|ZP_06992752.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1302] gi|300900666|ref|ZP_07118820.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 198-1] gi|218434522|emb|CAR15448.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UMN026] gi|284923893|emb|CBG36992.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 042] gi|291425529|gb|EFE98567.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1412] gi|298276394|gb|EFI17913.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1302] gi|300355844|gb|EFJ71714.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 198-1] Length = 355 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKLLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|9957825|gb|AAG09506.1|AF279617_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEAGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAASYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|324111014|gb|EGC05001.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii B253] Length = 355 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|320655329|gb|EFX23271.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 355 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNVLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSVFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|170769842|ref|ZP_02904295.1| dTDP-glucose 4,6-dehydratase [Escherichia albertii TW07627] gi|170121280|gb|EDS90211.1| dTDP-glucose 4,6-dehydratase [Escherichia albertii TW07627] Length = 355 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/337 (59%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSAL RY++N+ + V+V+DKLTYAGNL SL ++QS+ F+F +VD+CD Sbjct: 3 KILVTGGAGFIGSALVRYIINETRDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDVCD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L+ D Sbjct: 63 RAELARVFARHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLADD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYA 295 G+IGE YNIGG+NERKN+D+V I LL+ L P+ +H +LI F+ DRPGHD RYA Sbjct: 243 GKIGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLTNESWWK 339 >gi|9957864|gb|AAG09537.1|AF279625_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEGARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEAENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI EIGW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISREIGWKPLETFESGIRKTVEWYLANTQW 340 >gi|193062876|ref|ZP_03043969.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|260844652|ref|YP_003222430.1| putative dTDP-glucose 4,6-dehydratase [Escherichia coli O103:H2 str. 12009] gi|192931519|gb|EDV84120.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|257759799|dbj|BAI31296.1| predicted dTDP-glucose 4,6-dehydratase [Escherichia coli O103:H2 str. 12009] Length = 358 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/342 (57%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSKRYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+ KI E+GW PQE ESG+ KT+ WYL+NN W R Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTINWYLNNNDWCR 342 >gi|298353020|gb|ADI77000.1| RmlB [Salmonella enterica] Length = 363 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSTEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLANTKW 340 >gi|24527247|gb|AAK60448.1| DTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 358 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/342 (57%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+ KI E+GW PQE ESG+ KT+ WYL+NN W R Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTINWYLNNNDWCR 342 >gi|330505514|ref|YP_004382383.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina NK-01] gi|328919800|gb|AEB60631.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina NK-01] Length = 353 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/338 (59%), Positives = 253/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R+L+ D + +VL +DKLTYAGNL SL EI+ S + F+Q DI Sbjct: 1 MRVLITGGAGFIGSALTRHLIQDTEHEVLNLDKLTYAGNLESLLEIAASPRYRFVQADIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + L EFQPDAI++ AAESHVDRSI G FI TNI+GT+ LLE TR +W L+ Sbjct: 61 DAERVAATLSEFQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYSLLESTRAYWLGLNT 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VRKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ VRDWLYVEDH RAL V+ Sbjct: 181 VLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLKVVS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KN+D+V I LL+ L P+ + + +LI +++DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEQKNLDVVHSICALLEELAPQKPAGIARYEDLITYVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW PQE E+GL KTV WYLDN W R Sbjct: 301 AIDASKIECELGWVPQETFETGLRKTVQWYLDNLEWCR 338 >gi|62182397|ref|YP_218814.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224585745|ref|YP_002639544.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62130030|gb|AAX67733.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224470273|gb|ACN48103.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716890|gb|EFZ08461.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 355 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 250/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVTQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++QP+++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 WASLERVFQQYQPNSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|288816223|gb|ADC54945.1| RmlB [Escherichia coli] Length = 361 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/340 (58%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA R+++N+ + V+ +DKLTYAGNL SL EIS S +SF DIC Sbjct: 1 MKILVTGGAGFIGSADVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLPLFTEMTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+VF I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|327478703|gb|AEA82013.1| dTDP-glucose 4,6-dehydratase [Pseudomonas stutzeri DSM 4166] Length = 356 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/338 (59%), Positives = 253/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+ D + VL +DKLTYAGNL SL + + + FLQ DI Sbjct: 1 MRILVTGGAGFIGSALIRHLILDTEHSVLNLDKLTYAGNLESLAAVEDNPRYQFLQADIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + AL EFQPDAI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L Sbjct: 61 DRERVSEALLEFQPDAIMHLAAESHVDRSIDGPAEFIQTNIVGTYQLLEATRAYWQSLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERREAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RAL+ V+ Sbjct: 181 VLITNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGDGSQIRDWLFVEDHARALFKVVS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNI++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEQKNIEVVRGICALLEELAPNKPAGLARYEDLITFVKDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW PQE ++GL KTV WYL+N W R Sbjct: 301 AIDASKIERELGWVPQETFQTGLRKTVQWYLNNLEWCR 338 >gi|194434626|ref|ZP_03066882.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1012] gi|194417145|gb|EDX33258.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1012] gi|320178079|gb|EFW53059.1| dTDP-glucose 4,6-dehydratase [Shigella boydii ATCC 9905] gi|332084936|gb|EGI90118.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 155-74] Length = 355 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTAHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|315285652|gb|EFU45094.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 110-3] gi|323956211|gb|EGB51962.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H263] Length = 361 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL E+S S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEVSDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|197251412|ref|YP_002147055.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215115|gb|ACH52512.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 361 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTTYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|16761029|ref|NP_456646.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141275|ref|NP_804617.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412999|ref|YP_150074.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161613223|ref|YP_001587188.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551043|ref|ZP_02344798.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168818214|ref|ZP_02830214.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197361927|ref|YP_002141564.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198241929|ref|YP_002216184.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204928949|ref|ZP_03220092.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353240|ref|YP_002227041.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857533|ref|YP_002244184.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213023599|ref|ZP_03338046.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213052826|ref|ZP_03345704.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425545|ref|ZP_03358295.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213585955|ref|ZP_03367781.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650451|ref|ZP_03380504.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289809523|ref|ZP_06540152.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289827042|ref|ZP_06545850.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25292364|pir||AF0767 dTDP-glucose 4,6-dehydratase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503327|emb|CAD02460.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136901|gb|AAO68466.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127256|gb|AAV76762.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161362587|gb|ABX66355.1| hypothetical protein SPAB_00933 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197093404|emb|CAR58859.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197936445|gb|ACH73778.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321493|gb|EDZ06692.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273021|emb|CAR37969.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324063|gb|EDZ11902.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205344684|gb|EDZ31448.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206709336|emb|CAR33676.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320086529|emb|CBY96300.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326623931|gb|EGE30276.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628327|gb|EGE34670.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 361 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|218556351|ref|YP_002389265.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI1] gi|218363120|emb|CAR00760.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI1] Length = 355 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAGSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|9957829|gb|AAG09509.1|AF279618_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKTTSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|194735082|ref|YP_002115186.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710584|gb|ACF89805.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 361 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|282801701|gb|ADB02811.1| RmlB [Escherichia coli] Length = 361 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F+ DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFVHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKKLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYCEQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|283787530|ref|YP_003367395.1| dTDP-glucose 4,6-dehydratase [Citrobacter rodentium ICC168] gi|282950984|emb|CBG90661.1| dTDP-glucose 4,6-dehydratase [Citrobacter rodentium ICC168] Length = 355 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 248/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ RY++N+ +V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILITGGAGFIGSAVARYIINETADAAVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W L+ D Sbjct: 63 RAAVDRVFQHYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWHALAAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKAAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE +NIGG+NERKN+ +V I LL+ L P+ + +LI F++DRPGHD RYA Sbjct: 243 GTVGETWNIGGHNERKNLMVVETICDLLEELAPEKPQGIAHYRDLIAFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW P+E+ ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPRESFESGMRKTVQWYLANEAWWKPV 341 >gi|323968175|gb|EGB63584.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M863] gi|327253173|gb|EGE64827.1| dTDP-glucose 4,6-dehydratase [Escherichia coli STEC_7v] Length = 361 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EIS S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|323135556|ref|ZP_08070639.1| dTDP-glucose 4,6-dehydratase [Methylocystis sp. ATCC 49242] gi|322398647|gb|EFY01166.1| dTDP-glucose 4,6-dehydratase [Methylocystis sp. ATCC 49242] Length = 348 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/335 (57%), Positives = 246/335 (73%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSA+ R ++ +LV+DKLTYAGNL SLK +++ FSFLQ DIC Sbjct: 1 MRVMITGGAGFIGSAVSRAFIHSSDDHILVLDKLTYAGNLASLKPVAEDPRFSFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A EFQPD +++ AAESHVDRSI G FI TN++GTF++LE +W L Sbjct: 61 DRAAVGRAYSEFQPDVVMHLAAESHVDRSIDGPAAFIETNLVGTFVMLEAALEYWRALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D+ FRF ISTDEV+GSL GLF ED PY P+SPYSA+KA SD+LV AW HTYG+P Sbjct: 121 DRARNFRFQHISTDEVFGSLGADGLFREDTPYAPTSPYSASKAGSDHLVRAWRHTYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I IEG + +YG G+NVRDWLYVEDH AL LV ++ Sbjct: 181 IVTNCSNNYGPYHFPEKLIPLMIINAIEGKPLPVYGRGENVRDWLYVEDHAAALMLVARE 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G+ YN+GG NE +NID+V I L++ P++ + +LI F+ DRPGHD RYAIDSS Sbjct: 241 GVVGDSYNVGGRNEWRNIDVVHAICDLMNEFRPRAGGYRDLITFVNDRPGHDLRYAIDSS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+ ++GW P E E+GL KTV WYLDN WW+ + Sbjct: 301 KIERDLGWKPAERFETGLRKTVQWYLDNQEWWQAI 335 >gi|82777431|ref|YP_403780.1| dTDP-glucose 4,6 dehydratase [Shigella dysenteriae Sd197] gi|50982496|gb|AAT91850.1| dTDP-D-glucose 4,6-dehydratase [Shigella dysenteriae] gi|81241579|gb|ABB62289.1| dTDP-glucose 4,6 dehydratase [Shigella dysenteriae Sd197] Length = 361 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSKRYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVGWYLSNTKW 340 >gi|9957815|gb|AAG09498.1|AF279615_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] gi|9957820|gb|AAG09502.1|AF279616_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MQILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|170019633|ref|YP_001724587.1| dTDP-glucose 4,6 dehydratase [Escherichia coli ATCC 8739] gi|169754561|gb|ACA77260.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ATCC 8739] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|260856024|ref|YP_003229915.1| putative dTDP-glucose 4,6-dehydratase [Escherichia coli O26:H11 str. 11368] gi|24417730|gb|AAN60454.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] gi|56800696|gb|AAW31110.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] gi|77737729|gb|ABB01681.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] gi|257754673|dbj|BAI26175.1| predicted dTDP-glucose 4,6-dehydratase [Escherichia coli O26:H11 str. 11368] gi|323152431|gb|EFZ38719.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EPECa14] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|9957850|gb|AAG09526.1|AF279622_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLCDISKSNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLANTKW 340 >gi|315461754|emb|CBN82193.1| dTDP-glucose 4,6 dehydratase [Escherichia coli] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY VL +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVLTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLANTKW 340 >gi|256017786|ref|ZP_05431651.1| dTDP-glucose 4,6 dehydratase [Shigella sp. D9] gi|332278807|ref|ZP_08391220.1| dTDP-D-glucose 4,6-dehydratase [Shigella sp. D9] gi|332101159|gb|EGJ04505.1| dTDP-D-glucose 4,6-dehydratase [Shigella sp. D9] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|209981002|gb|ACJ05178.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Pomona] Length = 357 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAI++ KI E+ W PQE ESG+ KT+ WYL+N W R Sbjct: 301 DRRYAINADKISRELDWKPQETFESGIRKTIEWYLNNTEWCR 342 >gi|110644114|ref|YP_671844.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 536] gi|191174427|ref|ZP_03035929.1| dTDP-glucose 4,6-dehydratase [Escherichia coli F11] gi|300979317|ref|ZP_07174501.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 200-1] gi|110345706|gb|ABG71943.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 536] gi|190905282|gb|EDV64919.1| dTDP-glucose 4,6-dehydratase [Escherichia coli F11] gi|300308070|gb|EFJ62590.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 200-1] gi|324014734|gb|EGB83953.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 60-1] Length = 355 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNVLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N W + Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWCK 339 >gi|325499241|gb|EGC97100.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii ECD227] Length = 355 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD I++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ ++D Sbjct: 63 RAELARIFTEHQPDCIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAQAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|9957839|gb|AAG09517.1|AF279620_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVIRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVED+ Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDYA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNVDVVFTICDLLDEIVPKAASYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|16611766|gb|AAL27347.1|AF402315_2 dTDP-D-glucose 4,6-dehydratase [Shigella boydii] Length = 361 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALSIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|71044435|gb|AAZ20755.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli] gi|324019197|gb|EGB88416.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 117-3] Length = 358 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/342 (57%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DTAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+ KI E+GW PQE ESG+ KTV WYL+N+ W R Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLNNSDWCR 342 >gi|301021422|ref|ZP_07185446.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 69-1] gi|300398058|gb|EFJ81596.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 69-1] Length = 355 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDIC Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVIVVDKLTYAGNLMSLAPVAQSERFAFEKVDICG 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARTYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIVHELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|24115082|ref|NP_709592.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 301] gi|30064917|ref|NP_839088.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|24054348|gb|AAN45299.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 301] gi|30043178|gb|AAP18899.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|313647767|gb|EFS12214.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|332751076|gb|EGJ81480.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-671] gi|333013595|gb|EGK32962.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-304] Length = 355 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYS-HTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELASNKPHGVAYYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|160863305|gb|ABX51872.1| dTDP-D-glucose-4,6-dehydratase [Cronobacter sakazakii] Length = 359 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N + +V+ +DKLTYAGN S+ ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINHTQDRVVNLDKLTYAGNPESVASVANSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + KE QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +WS L + Sbjct: 61 DRAALDRVFKEHQPDAVMHLAAESHVDRSISGPADFIETNIVGTYTLLEAARAYWSSLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEWHESAALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+IGE YNIGG+NE+KN+D+V I LLD + PK+ S+ E I ++ DRPGH Sbjct: 241 RALYTVVTQGQIGETYNIGGHNEKKNLDVVLTICDLLDEIKPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDADKISRELGWRPQETFESGIRKTVHWYLNNEEW 340 >gi|320197600|gb|EFW72212.1| dTDP-glucose 4,6-dehydratase [Escherichia coli WV_060327] Length = 355 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/337 (58%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +R+WLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIREWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N W + Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWCK 339 >gi|307340768|gb|ADN43831.1| RmlB [Escherichia coli] Length = 361 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F D+C Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADVC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|187880615|gb|ACD37121.1| RmlB [Shigella boydii] Length = 361 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|197263888|ref|ZP_03163962.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242143|gb|EDY24763.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 361 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVINIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|168481292|gb|ACA24782.1| RmlB [Shigella dysenteriae] Length = 361 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSKRYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG++KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIHKTVEWYLSNTKW 340 >gi|16765427|ref|NP_461042.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991012|ref|ZP_02572111.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242170|ref|ZP_02667102.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466245|ref|ZP_02700115.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443120|ref|YP_002041367.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449636|ref|YP_002046147.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|132499|sp|P26391|RFBB_SALTY RecName: Full=dTDP-glucose 4,6-dehydratase gi|13786955|pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium gi|13786956|pdb|1G1A|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium gi|13786957|pdb|1G1A|C Chain C, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium gi|13786958|pdb|1G1A|D Chain D, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium gi|18655661|pdb|1KEU|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Salmonella Enterica Serovar Typhimurium With Dtdp-D-Glucose Bound gi|18655662|pdb|1KEU|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Salmonella Enterica Serovar Typhimurium With Dtdp-D-Glucose Bound gi|18655663|pdb|1KEW|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Salmonella Enterica Serovar Typhimurium With Thymidine Diphosphate Bound gi|18655664|pdb|1KEW|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Salmonella Enterica Serovar Typhimurium With Thymidine Diphosphate Bound gi|581654|emb|CAA40115.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica] gi|16420629|gb|AAL21001.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194401783|gb|ACF62005.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407940|gb|ACF68159.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195631509|gb|EDX50069.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205330442|gb|EDZ17206.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338665|gb|EDZ25429.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247312|emb|CBG25137.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994151|gb|ACY89036.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158658|emb|CBW18170.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321224745|gb|EFX49808.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130420|gb|ADX17850.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989032|gb|AEF08015.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 361 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|45644917|gb|AAS73163.1| putative dTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 358 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/342 (57%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DSVAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+ KI E+GW PQE ESG+ KT+ WYL+NN W R Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTINWYLNNNDWCR 342 >gi|205354508|ref|YP_002228309.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274289|emb|CAR39310.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629642|gb|EGE35985.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 355 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/339 (57%), Positives = 249/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS++ R+++++ V+V+DKLTYAGNL SL ++Q + F+F +VDICD Sbjct: 3 RILVTGGAGFIGSSVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQIDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTLYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|62955957|gb|AAY23333.1| RmlB [Shigella boydii] gi|115503058|gb|ABI98981.1| RmlB [Escherichia coli] Length = 361 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKTSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|323948399|gb|EGB44383.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H120] gi|324119070|gb|EGC12959.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1167] Length = 361 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARVFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKTLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|312913088|dbj|BAJ37062.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 354 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|293393871|ref|ZP_06638178.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera DSM 4582] gi|291423698|gb|EFE96920.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera DSM 4582] Length = 357 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/337 (58%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ V+V+DKLTYAGNL SL + S ++F QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIDATADSVVVVDKLTYAGNLESLAPAAASERYAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPDA+++ AAESHVDRSI G FI TN++GT+ LLE R +W L+ Sbjct: 65 RAALDRVFAQYQPDAVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLATP 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 RQQDFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I I G + +YGDG VRDWLYVEDH RALYLV Sbjct: 185 LITNCSNNYGPYHFPEKLIPLVILNAISGKPLPVYGDGAQVRDWLYVEDHARALYLVATT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKNID+V I LL+ L P + +LI +++DRPGHD RYA Sbjct: 245 GKVGETYNIGGHNERKNIDVVQTICDLLEQLAPSKPQGVAQYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV WYL N WWR Sbjct: 305 IDAGKIERELGWRPQETFESGIRKTVAWYLANETWWR 341 >gi|325497859|gb|EGC95718.1| dTDP-glucose 4,6 dehydratase [Escherichia fergusonii ECD227] Length = 361 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHSDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|332751902|gb|EGJ82297.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2747-71] gi|332764370|gb|EGJ94605.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2930-71] Length = 355 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELASNKLHGVAYYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|298485664|ref|ZP_07003743.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159690|gb|EFI00732.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 357 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/334 (59%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTADSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +WS L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VRKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++NI++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNIEVVNTVCALLDQLRPDSVHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWTPEESFESGIRKTVQWYLDNPEW 334 >gi|6729762|pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli gi|6729763|pdb|1BXK|B Chain B, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+G PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGCVPQETFESGMRKTVQWYLANESWWK 339 >gi|330988615|gb|EGH86718.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 357 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/334 (59%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +WS L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VRKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++NI++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNIEVVNTVCALLDQLRPDSAHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVEWYLDNPEW 334 >gi|203285008|gb|ACH97127.1| RmlB [Escherichia coli] Length = 361 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|156933365|ref|YP_001437281.1| dTDP-glucose 4,6 dehydratase [Cronobacter sakazakii ATCC BAA-894] gi|156531619|gb|ABU76445.1| hypothetical protein ESA_01178 [Cronobacter sakazakii ATCC BAA-894] Length = 359 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 247/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N + +V+ +DKLTYAGN S+ ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINHTQDRVVNLDKLTYAGNPESVASVANSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + KE QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +WS L + Sbjct: 61 DRAALDRVFKEHQPDAVMHLAAESHVDRSISGPADFIETNIVGTYTLLEAARAYWSSLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 QRKAAFRFHHISTDEVYGDLPHPDEWHESAALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+IGE YNIGG+NE+KN+D+V I LLD + PK+ S+ E I ++ DRPGH Sbjct: 241 RALYTVVTQGQIGETYNIGGHNEKKNLDVVLTICDLLDEIKPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDADKISRELGWRPQETFESGIRKTVYWYLNNEEW 340 >gi|294491352|gb|ADE90108.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IHE3034] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLADVSDSERYFFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARVFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEGLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|237799718|ref|ZP_04588179.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022573|gb|EGI02630.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 357 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/334 (58%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +WS L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARGYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++NI++V + LLD + P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNIEVVNTVCALLDQMRPDSAHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|115503045|gb|ABI98969.1| RmlB [Escherichia coli] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|15833975|ref|NP_312748.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. Sakai] gi|168751746|ref|ZP_02776768.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|168753682|ref|ZP_02778689.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|168764134|ref|ZP_02789141.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|168768066|ref|ZP_02793073.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|168775664|ref|ZP_02800671.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|168780684|ref|ZP_02805691.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|168786623|ref|ZP_02811630.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|168801005|ref|ZP_02826012.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|195938077|ref|ZP_03083459.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4024] gi|208805689|ref|ZP_03248026.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208813029|ref|ZP_03254358.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208818281|ref|ZP_03258601.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209399629|ref|YP_002273306.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|217325882|ref|ZP_03441966.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254795786|ref|YP_003080623.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14359] gi|261225563|ref|ZP_05939844.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. FRIK2000] gi|261255609|ref|ZP_05948142.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. FRIK966] gi|13364196|dbj|BAB38144.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. Sakai] gi|187768885|gb|EDU32729.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|188014279|gb|EDU52401.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|189001405|gb|EDU70391.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|189358938|gb|EDU77357.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|189362621|gb|EDU81040.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|189365802|gb|EDU84218.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|189373224|gb|EDU91640.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|189376800|gb|EDU95216.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|208725490|gb|EDZ75091.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208734306|gb|EDZ82993.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208738404|gb|EDZ86086.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209161029|gb|ACI38462.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|209753438|gb|ACI75026.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753440|gb|ACI75027.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753442|gb|ACI75028.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753446|gb|ACI75030.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|217322103|gb|EEC30527.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254595186|gb|ACT74547.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14359] gi|320191118|gb|EFW65768.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC1212] gi|320639273|gb|EFX08895.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. G5101] gi|320644658|gb|EFX13708.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H- str. 493-89] gi|320649983|gb|EFX18486.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H- str. H 2687] gi|326344246|gb|EGD68006.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. 1125] gi|326347927|gb|EGD71641.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. 1044] Length = 355 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/335 (58%), Positives = 243/335 (72%), Gaps = 6/335 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SKI E+GW PQE ESG+ KTV WYL N W Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESW 337 >gi|331668738|ref|ZP_08369586.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] gi|331063932|gb|EGI35843.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG++KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIHKTVEWYLSNTKW 340 >gi|203285020|gb|ACH97138.1| RmlB [Escherichia coli] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNENKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|168481304|gb|ACA24793.1| RmlB [Escherichia coli] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|194436137|ref|ZP_03068239.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|194424865|gb|EDX40850.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|323972812|gb|EGB68011.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA007] Length = 361 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/366 (54%), Positives = 253/366 (69%), Gaps = 15/366 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPYPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNL 350 DRRYAID+ KI E+GW PQE ESG+ KTV WYL W + +K N Y W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLAKMQW----VENVKTGN-YQSWIEQ 355 Query: 351 NEMSCN 356 N M N Sbjct: 356 NYMERN 361 >gi|83645207|ref|YP_433642.1| dTDP-glucose 4,6-dehydratase [Hahella chejuensis KCTC 2396] gi|83633250|gb|ABC29217.1| dTDP-glucose 4,6-dehydratase [Hahella chejuensis KCTC 2396] Length = 354 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 253/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ RY++N V+ +DKLTYAGNL++L I S + F+Q DIC Sbjct: 1 MKILVTGGAGFIGSAVVRYIINCTGDSVVNVDKLTYAGNLDNLSNIENSERYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I + L ++PDA+++ AAESHVDRSI G +FI TNI+GT+ LLEE+R +W + Sbjct: 61 DRAVIANVLSSYKPDAVMHLAAESHVDRSIDGPGDFIQTNIVGTYTLLEESRKYWLKMPT 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G LD LF+ED PY PSSPYSA+KASSD+LV AWG TYG+P Sbjct: 121 ERKNAFRFHHISTDEVFGDLDGVTDLFTEDTPYAPSSPYSASKASSDHLVRAWGRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH ALY V+ Sbjct: 181 VIVTNCSNNYGPYHFPEKLIPLMILNALEGRPLPVYGKGDQIRDWLYVEDHAAALYKVVS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNI++V I LL+ L+P + +LI F++DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKKNIEVVQAICQLLEELVPNKPQGVSCYQDLISFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW P E ESGL KTV WYL N+ WW+ Sbjct: 301 AIDASKIQRELGWVPAETFESGLRKTVEWYLTNSAWWQ 338 >gi|300930358|ref|ZP_07145769.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] gi|300461758|gb|EFK25251.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] Length = 384 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EI S +SF DIC Sbjct: 24 VKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEIYDSERYSFEHADIC 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 84 DAEAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 143 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 144 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 203 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 204 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 263 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+VF I LLD ++PK S+ E I ++ DRPGH Sbjct: 264 RALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH 323 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 324 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 363 >gi|187880674|gb|ACD37174.1| RmlB [Escherichia coli] Length = 361 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MRILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|73809589|gb|AAZ85714.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 361 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKTSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|46451851|gb|AAS98026.1| RmlB [Shigella boydii] Length = 361 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGYLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIARELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|91211325|ref|YP_541311.1| dTDP-glucose 4,6 dehydratase [Escherichia coli UTI89] gi|300986906|ref|ZP_07177884.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|91072899|gb|ABE07780.1| RfbB, subunit of dTDP-glucose 4,6-dehydratase [Escherichia coli UTI89] gi|300407835|gb|EFJ91373.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|307626415|gb|ADN70719.1| dTDP-glucose 4,6 dehydratase [Escherichia coli UM146] gi|315295249|gb|EFU54584.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 153-1] Length = 361 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLADVSDSERYFFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEGLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|157144420|ref|YP_001451739.1| dTDP-glucose 4,6-dehydratase [Citrobacter koseri ATCC BAA-895] gi|157081625|gb|ABV11303.1| hypothetical protein CKO_00129 [Citrobacter koseri ATCC BAA-895] Length = 355 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/339 (57%), Positives = 248/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++Q F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIDETPDAVVVVDKLTYAGNLMSLAPVAQHERFAFERVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L+ + Sbjct: 63 RASLDRVFQQYQPDYVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARTYWATLNDE 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY VL Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYRVLTA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+++V I LL+ L P+ + LI F++DRPGHD RYA Sbjct: 243 GEVGETYNIGGHNERKNLEVVETICDLLEELAPQKPLGVAHYRSLIAFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID++KI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDAAKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|168481338|gb|ACA24824.1| RmlB [Escherichia coli] gi|320198731|gb|EFW73331.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EC4100B] Length = 361 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKTLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|156539323|gb|ABU80586.1| dTDP-D-glucose 4,6-dehydratase [Shigella flexneri] gi|156539338|gb|ABU80596.1| dTDP-D-glucose 4,6-dehydratase [Shigella flexneri] gi|320185807|gb|EFW60561.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri CDC 796-83] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK +FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKTRFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KT+ WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTLEWYLSNTKW 340 >gi|168229419|ref|ZP_02654477.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472643|ref|ZP_03078627.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459007|gb|EDX47846.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335648|gb|EDZ22412.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVMLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+ N+D+VF I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKNNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|189092401|gb|ACD75801.1| dTDP-glucose 4,6 dehydratase [Escherichia coli] Length = 383 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL E+S S +SF DIC Sbjct: 23 VKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEVSDSERYSFEHADIC 82 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 83 DAEAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 142 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 143 EKKKNFRFHHISTDEVYGDLPHPDEVNNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 202 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 203 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 262 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 263 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 322 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 323 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 362 >gi|110806010|ref|YP_689530.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 5 str. 8401] gi|110615558|gb|ABF04225.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 5 str. 8401] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G+ +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGEQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|330951113|gb|EGH51373.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae Cit 7] Length = 357 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/334 (58%), Positives = 248/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT+ LLE R +WS L + Sbjct: 61 NREDVDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYTLLESARGYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRPDSAHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|168259599|ref|ZP_02681572.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350796|gb|EDZ37427.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKVTSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|227887094|ref|ZP_04004899.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|227835444|gb|EEJ45910.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|307554113|gb|ADN46888.1| dTDP-D-glucose 4,6-dehydratase rmlB [Escherichia coli ABU 83972] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAIVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEKLPLFIETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICNLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|332084697|gb|EGI89885.1| dTDP-glucose 4,6-dehydratase [Shigella boydii 5216-82] Length = 355 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/337 (58%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTAHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW QE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIAREVGWLQQETFESGMRKTVQWYLANESWWK 339 >gi|157154898|ref|YP_001463392.1| dTDP-glucose 4,6 dehydratase [Escherichia coli E24377A] gi|157076928|gb|ABV16636.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E24377A] Length = 361 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|168481391|gb|ACA24873.1| RmlB [Escherichia coli] Length = 361 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSTVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G+ FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGSAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|187730265|ref|YP_001879838.1| dTDP-glucose 4,6 dehydratase [Shigella boydii CDC 3083-94] gi|187427257|gb|ACD06531.1| dTDP-glucose 4,6-dehydratase [Shigella boydii CDC 3083-94] Length = 361 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNRQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNIKEGLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|160863319|gb|ABX51885.1| dTDP-D-glucose-4,6-dehydratase [Cronobacter sakazakii] Length = 360 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N + +V+ +DKLTYAGN S+ ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINHTQDRVVNLDKLTYAGNPESVASVANSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + KE QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +WS L Sbjct: 61 DRAALDRVFKEHQPDAVMHLAAESHVDRSISGPADFIETNIVGTYTLLEAARAYWSSLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 QRKAAFRFHHISTDEVYGDLPHPDEWHESAALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+IGE YNIGG+NE+KN+D+V I LLD + PK+ S+ E I ++ DRPGH Sbjct: 241 RALYTVVTQGQIGETYNIGGHNEKKNLDVVLTICDLLDEIKPKATSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDADKISRELGWRPQETFESGIRKTVHWYLNNEEW 340 >gi|239831406|ref|ZP_04679735.1| dTDP-glucose 4,6-dehydratase [Ochrobactrum intermedium LMG 3301] gi|239823673|gb|EEQ95241.1| dTDP-glucose 4,6-dehydratase [Ochrobactrum intermedium LMG 3301] Length = 358 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 248/338 (73%), Gaps = 4/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+CR+L +D +I V+ +DKLTYAGNL SL++I +SFLQ DIC Sbjct: 1 MNILVTGGAGFIGSAVCRHLASDPRINVVNLDKLTYAGNLASLRQIENHPNYSFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + AL+ + D +++ AAESHVDRSI G FI TNI+GTF LL +W L + Sbjct: 61 DDTSVLDALRANEIDVVMHLAAESHVDRSIDGPGAFIETNIVGTFRLLNAALAYWRELPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEV+G L D G+F+E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 PRKSCFRFHHISTDEVFGDLPFDSGIFTEETPYKPSSPYSASKAASDHLVRAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+LSNCSNNYGP+HFPEKLIPL I ++ + +YG G NVRDWLYVEDH RAL LV Sbjct: 181 VVLSNCSNNYGPFHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLYVEDHARALALVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YNIGG ER N+++V I +LD P++ SH +LI F+ DRPGHDRRYAI Sbjct: 241 TGKLGESYNIGGRAERTNLNVVETICAILDKKRPRANGKSHADLITFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+GW PQE E+GL KT+ WYLDN WWW P+ Sbjct: 301 DASKIERELGWKPQETFETGLEKTIQWYLDNAWWWEPI 338 >gi|301381031|ref|ZP_07229449.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato Max13] gi|302059360|ref|ZP_07250901.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato K40] gi|302134877|ref|ZP_07260867.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 357 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/334 (58%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +W+ L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWNQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRPDSAHRPHANLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|168481376|gb|ACA24859.1| RmlB [Shigella dysenteriae] Length = 361 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAG+L SL ++S S + F D+C Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGDLESLADVSDSERYVFEHADVC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|127512332|ref|YP_001093529.1| dTDP-glucose 4,6 dehydratase [Shewanella loihica PV-4] gi|126637627|gb|ABO23270.1| dTDP-glucose 4,6-dehydratase [Shewanella loihica PV-4] Length = 365 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL + + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLVSVDKDERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E +PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W+ L Sbjct: 61 DRAELDRVFNEHKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNELPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 DKKTAFRFHHISTDEVYGDLLHPDEVQNPDELPLFTETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPVYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G IGE YNIGG+NE++N+++V I +LD L+PK ++E I ++ DRPGH Sbjct: 241 RALYKVVTEGVIGETYNIGGHNEKQNLEVVKTICSILDELMPKDVPYSEQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK+ E+ W P+E E+GL KTV WYLDN W Sbjct: 301 DRRYAIDSSKMSQELNWLPEETFETGLRKTVQWYLDNQVW 340 >gi|73809577|gb|AAZ85703.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|333002403|gb|EGK21965.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-218] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGNQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|297499070|gb|ADI43256.1| RmlB [Escherichia coli] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEKLPLFIETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICNLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|24113426|ref|NP_707936.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 2a str. 301] gi|30063492|ref|NP_837663.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 2a str. 2457T] gi|2506452|sp|P37777|RFBB_SHIFL RecName: Full=dTDP-glucose 4,6-dehydratase gi|294896|gb|AAA53679.1| dTDP-D-glucose 4,6-dehydratase [Shigella flexneri] gi|24052449|gb|AAN43643.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 2a str. 301] gi|30041745|gb|AAP17472.1| dTDP-glucose 4,6 dehydratase [Shigella flexneri 2a str. 2457T] gi|281601494|gb|ADA74478.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2002017] gi|313649922|gb|EFS14342.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|332756674|gb|EGJ87023.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-671] gi|332766386|gb|EGJ96595.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2930-71] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|28868296|ref|NP_790915.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str. DC3000] gi|28851533|gb|AAO54610.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str. DC3000] gi|331019593|gb|EGH99649.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 357 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/334 (58%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +W+ L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWNTLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VRKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRPDSAHRPHANLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|311697172|gb|ADQ00044.1| dTDP-glucose 4,6-dehydratase [marine bacterium HP15] Length = 357 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/339 (58%), Positives = 251/339 (74%), Gaps = 9/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGSA+ R+++N +V+ +D LTYAGNL SLKE++ S+ ++F QVDIC Sbjct: 1 MKLLITGGAGFIGSAVIRHIINGTTDEVVNLDILTYAGNLESLKEVNDSSRYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L E QPDAI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W L Sbjct: 61 DRSGVDRVLAEHQPDAIMHLAAESHVDRSIDGPADFIETNIVGTYTLLEATRQYWQGLEA 120 Query: 121 DKKDQFRFLQISTDEVYGSL---------DKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 +KK FRF ISTDEVYG L ++ LF+E Y PSSPYSA+KASSD+LV AW Sbjct: 121 EKKANFRFHHISTDEVYGDLPHPSETSNAEEHLFTEQTAYAPSSPYSASKASSDHLVRAW 180 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 TYG+PVL++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH R Sbjct: 181 QRTYGLPVLVTNCSNNYGPYHFPEKLIPLIILNALEGKPLPVYGKGDQIRDWLYVEDHAR 240 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ALY V+ +G+ G+ YNIGG+NE++NID+V I +L L P+ S+ ELI F+ DRPGHD Sbjct: 241 ALYKVVTEGQPGKTYNIGGHNEKQNIDVVHIICGILQELRPQERSYGELITFVRDRPGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID+ KI+ E+GW P+E E+G+ KTV WYLDN W Sbjct: 301 RRYAIDADKIQRELGWAPEETFETGIRKTVQWYLDNLDW 339 >gi|331658121|ref|ZP_08359083.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] gi|187880656|gb|ACD37158.1| RmlB [Escherichia coli] gi|187880665|gb|ACD37166.1| RmlB [Escherichia coli] gi|331056369|gb|EGI28378.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] gi|333002553|gb|EGK22114.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri VA-6] gi|333003381|gb|EGK22925.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-272] gi|333017211|gb|EGK36531.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-227] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|330961718|gb|EGH61978.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 357 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/334 (58%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDAI++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L + Sbjct: 61 NREDLDRVFKEHQPDAIMHLAAESHVDRSITGPSEFIQTNIIGTYTLLEAARGYWNQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKAGFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 ALVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 +G+IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGKIGETYNIGGHNEKQNLEVVHAVCALLDQLRPDSAHLPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|148252644|ref|YP_001237229.1| dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] gi|146404817|gb|ABQ33323.1| dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] Length = 348 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/335 (58%), Positives = 245/335 (73%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGSA+CR+LV DL VLV+DKLTYAGN SL + S FSF QVDIC Sbjct: 1 MKIIVTGGAGFIGSAVCRHLVADLGHAVLVLDKLTYAGNTASLAPVMSSPSFSFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+ + A F PDAI++ AAE+HVDRSI G D FI TN++GTF LLE R + + + Sbjct: 61 ERQKVEQAFASFAPDAIIHLAAETHVDRSIDGPDHFIQTNLVGTFTLLEVARRYLNGAGR 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K DQFRF+ +STDEV+GSL ++GLF+E Y+PSSPYSA+KA SD+L AW TYG+PV Sbjct: 121 AKADQFRFIHVSTDEVFGSLGEEGLFTETTAYDPSSPYSASKAGSDHLARAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPY FPEKLIPL I + + +YGDG N+RDWL+V+DH RAL +L++ Sbjct: 181 IVSNCSNNYGPYQFPEKLIPLMILNALHAQPLPVYGDGGNIRDWLFVDDHARALVALLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YNIGG ER+NID+V +I LD L P H L+ F+ DRPGHDRRYA+D S Sbjct: 241 GVPGATYNIGGRTERRNIDVVRQICQCLDRLRPAGGPHERLLTFVADRPGHDRRYALDCS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ E+GW QE E+G+ KTV WYLD + WW PL Sbjct: 301 KLEGELGWKAQETFETGIEKTVRWYLDRSDWWMPL 335 >gi|50882468|gb|AAT85647.1| RmlB [Escherichia coli] gi|315299448|gb|EFU58699.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 16-3] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ I E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAENIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|323936935|gb|EGB33218.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1520] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHEDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|82543419|ref|YP_407366.1| dTDP-glucose 4,6 dehydratase [Shigella boydii Sb227] gi|16611723|gb|AAL27310.1|AF402312_2 dTDP-D-glucose 4,6-dehydratase [Shigella boydii] gi|81244830|gb|ABB65538.1| dTDP-glucose 4,6 dehydratase [Shigella boydii Sb227] gi|167410109|gb|ABZ79713.1| RmlB [Escherichia coli] gi|332097152|gb|EGJ02135.1| dTDP-glucose 4,6-dehydratase [Shigella boydii 3594-74] Length = 361 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAVMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FR ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRLHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I +I DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYIADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|300717503|ref|YP_003742306.1| dTDP-glucose 4,6-dehydratase [Erwinia billingiae Eb661] gi|299063339|emb|CAX60459.1| dTDP-glucose 4,6-dehydratase [Erwinia billingiae Eb661] Length = 359 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 248/338 (73%), Gaps = 8/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL S+K++S S + F Q+DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIQDTQDSVINVDKLTYAGNLESIKDVSDSERYQFFQLDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E QPDAI++ AAESHVDRSI G +F+ TN++GT+ LLE TR +W+ LS Sbjct: 61 DGAGLSKVMNETQPDAIMHLAAESHVDRSITGPADFVQTNVVGTYTLLEATRQYWNTLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +KK FRF ISTDEVYG L + LF+E PY PSSPYS+TKA+SD+LV AWG Sbjct: 121 EKKQAFRFHHISTDEVYGDLPHPDEMSGELPLFTETTPYAPSSPYSSTKAASDHLVRAWG 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +PV+++NCSNNYGPYHFPEKLIPL I +E + +YG G +RDWLYVEDH RA Sbjct: 181 RTYKLPVIITNCSNNYGPYHFPEKLIPLIIINALEKKPLPVYGKGDQIRDWLYVEDHARA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY V+ + +G YNIGG+NE++N+++V + LLD L P + +LI ++ DRPGHDR Sbjct: 241 LYKVVTEAEVGTTYNIGGHNEKQNLEVVQTVCALLDELQPTEGRYADLITYVNDRPGHDR 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAIDSSKI+ ++GW PQE ESGL KTV WYL NN W Sbjct: 301 RYAIDSSKIQKDLGWKPQETFESGLRKTVQWYLTNNEW 338 >gi|257481998|ref|ZP_05636039.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008858|gb|EGH88914.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 357 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/334 (58%), Positives = 248/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG GFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGTGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +WS L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARGYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VRKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++NI++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNIEVVNTVCALLDQLRPDSVHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWTPEESFESGIRKTVQWYLDNPEW 334 >gi|300821854|ref|ZP_07101999.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300525696|gb|EFK46765.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] Length = 361 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/366 (54%), Positives = 252/366 (68%), Gaps = 15/366 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPYPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY+V+ +G+ GE YNIGG NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYIVVTEGKAGETYNIGGYNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNL 350 DRRYAID+ KI E+GW PQE ESG+ KTV WYL W + +K N Y W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLAKMQW----VENVKTGN-YQSWIEQ 355 Query: 351 NEMSCN 356 N M N Sbjct: 356 NYMERN 361 >gi|50429170|gb|AAT77169.1| RmlB [Escherichia coli] gi|323161879|gb|EFZ47754.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E128010] Length = 358 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/342 (56%), Positives = 245/342 (71%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSGSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFALHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDKIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+ KI E+GW PQE ESG+ KT+ WY +NN W R Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTINWYFNNNDWCR 342 >gi|320666078|gb|EFX33092.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. LSU-61] Length = 355 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/335 (58%), Positives = 242/335 (72%), Gaps = 6/335 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RA Y V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAQYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SKI E+GW PQE ESG+ KTV WYL N W Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESW 337 >gi|117624237|ref|YP_853150.1| dTDP-glucose 4,6 dehydratase [Escherichia coli APEC O1] gi|237704495|ref|ZP_04534976.1| dTDP-glucose 4,6 dehydratase [Escherichia sp. 3_2_53FAA] gi|300936655|ref|ZP_07151559.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] gi|115513361|gb|ABJ01436.1| RfbB, subunit of dTDP-glucose 4,6-dehydratase [Escherichia coli APEC O1] gi|226900861|gb|EEH87120.1| dTDP-glucose 4,6 dehydratase [Escherichia sp. 3_2_53FAA] gi|288816198|gb|ADC54922.1| RmlB [Escherichia coli] gi|300458236|gb|EFK21729.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] gi|323951793|gb|EGB47667.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H252] Length = 361 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGQAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|288816209|gb|ADC54932.1| RmlB [Escherichia coli] Length = 361 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL E+S S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEVSDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFYHISTDEVYGDLPHPDEVNNNEALPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ES + KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESWIRKTVEWYLANTNW 340 >gi|170720583|ref|YP_001748271.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida W619] gi|169758586|gb|ACA71902.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida W619] Length = 358 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/334 (57%), Positives = 251/334 (75%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ V+ +DKLTYAGNL SL+ + Q ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIISNTDDSVINVDKLTYAGNLESLQSVDQDTRYAFERVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +E QPDA+++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L + Sbjct: 61 DRGELDRVFREHQPDAVMHLAAESHVDRSISGPSEFIQTNIIGTYNLLEAARGYWNSLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 TRKAAFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWARTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G +G+ YNIGG+NE++NI++V + LLD L P+S H +L+ +++DRPGHD RYAI Sbjct: 241 EGEVGQTYNIGGHNEKQNIEVVRTVCALLDELRPESAFRPHVDLLTYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEETFESGIRKTVQWYLDNPEW 334 >gi|293415329|ref|ZP_06657972.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] gi|291432977|gb|EFF05956.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] Length = 361 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DSVAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|331685507|ref|ZP_08386091.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H299] gi|331077208|gb|EGI48422.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H299] Length = 355 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/337 (57%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G F+ TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYV+DH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVDDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N W + Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWCK 339 >gi|148191|gb|AAA67588.1| possibly rffE; (UDP-GlcNAc-2-epimerase) [Escherichia coli str. K-12 substr. MG1655] Length = 355 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/337 (58%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+G PQE ESG+ K V WYL N WW+ Sbjct: 303 IDASKIARELGCVPQETFESGMRKXVQWYLANESWWK 339 >gi|324114026|gb|EGC07999.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii B253] Length = 361 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLVDVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAVAMKRIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK +FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKRFRFHHISTDEVYGDLPHPDEVNNNETLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLANTKW 340 >gi|63033901|gb|AAY28252.1| RmlB [Escherichia coli] Length = 361 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DATAMARIFALHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|21672267|gb|AAM74474.1| dTDP-D-glucose-4,6-dehydratase [Aeromonas hydrophila] Length = 379 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 247/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 19 MKILVTGGAGFIGSAVVRHIIRDTNDSVINLDKLTYAGNLESLASVANSERYAFEQVDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 79 NRAELDRVFAQHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYMLLEAARAYWNGLDE 138 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 139 VRKAAFRFHHISTDEVYGDLPHPDEVAPGVALPLFTETTPYAPSSPYSASKASSDHLVRA 198 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 199 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQIRDWLYVEDHA 258 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G IGE YNIGG+NER+N+D+V I LLD ++PK+ S+ + I ++ DRPGH Sbjct: 259 RALYTVVTTGAIGETYNIGGHNERQNLDVVHTICDLLDEMVPKAGSYRDQITYVADRPGH 318 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SK+ +E+ W PQE ESG+ KTV WYLDN W Sbjct: 319 DRRYAIDASKMSAELAWLPQETFESGIRKTVQWYLDNQQW 358 >gi|117919827|ref|YP_869019.1| dTDP-glucose 4,6 dehydratase [Shewanella sp. ANA-3] gi|117612159|gb|ABK47613.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. ANA-3] Length = 359 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/343 (55%), Positives = 249/343 (72%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SLK +S + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIMNTNDSVINVDKLTYAGNLESLKLVSTNPRYNFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++QPDA+++ AAESHVDRSI G +FI TNI+GT+ILLE R +W+ L Sbjct: 61 DRATLERVFSQYQPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYILLEAARQYWTQLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-------------LFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+L Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEQEGQAVNQYLPLFTETTPYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G++GE YNIGG+NE++NI++V I +LD+L+PK+ + E I F+ DR Sbjct: 241 DHARALYKVVTEGKVGETYNIGGHNEKQNIEVVKTICSILDSLVPKATPYAEQITFVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+SK+ +E+ W PQE E+GL KT+ WYL N W Sbjct: 301 PGHDRRYAIDASKMSAELNWQPQETFETGLRKTIEWYLANQEW 343 >gi|330829236|ref|YP_004392188.1| dTDP-glucose 4,6-dehydratase [Aeromonas veronii B565] gi|328804372|gb|AEB49571.1| dTDP-glucose 4,6-dehydratase [Aeromonas veronii B565] Length = 361 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL ++S S+ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIRDTQDAVINLDKLTYAGNLESLADVSSSDRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 61 NRAELDRVFALHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYMLLEAARAYWNGLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 ARKAAFRFHHISTDEVYGDLPHPDEVAAGEPLPLFTETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G VRDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQVRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G +GE YNIGG+NE++N+++V+ I LLD ++PKS S+ E I ++ DRPGH Sbjct: 241 RALYKVVTTGLVGETYNIGGHNEKQNLEVVYTICDLLDEMVPKSGSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++K+ +E+ W PQE ESG+ KTV WYLDN W Sbjct: 301 DRRYAIDATKMSAELAWQPQETFESGIRKTVQWYLDNQQW 340 >gi|294637939|ref|ZP_06716207.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] gi|291088900|gb|EFE21461.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] Length = 356 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/339 (56%), Positives = 249/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ V+V+DKLTYAGNL SL ++QS+ ++F + DI D Sbjct: 5 RILVTGGAGFIGSAVVRHIIAQTSDSVVVVDKLTYAGNLASLAPVAQSDRYAFERADIGD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L ++QPDAI++ AAESHVDRSI G FI TNI+GT+ LLE R +W L Sbjct: 65 RAAMDRILAQYQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEAARAYWITLPAT 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRF ISTDEVYG L + LF ED PY PSSPYSA+KASSD+LV AW TYG+PV Sbjct: 125 RRAAFRFHHISTDEVYGDLQGPQDLFREDTPYAPSSPYSASKASSDHLVRAWLRTYGLPV 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ Sbjct: 185 LVTNCSNNYGPYHFPEKLIPLTIINALAGKPLPVYGNGLQVRDWLYVEDHARALYRVVTA 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NER+NID+V + LL ++P++ + + +LI ++ DRPGHD RYA Sbjct: 245 GKVGETYNIGGHNERRNIDVVTTLCALLQEMVPQTPAGVARYADLITYVTDRPGHDLRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI+ E+GW P+E ESG+ KTV WYL N WWR + Sbjct: 305 IDASKIERELGWRPEETFESGIRKTVAWYLANVPWWRAV 343 >gi|187880502|gb|ACD37020.1| RmlB [Shigella boydii] Length = 361 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +E + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEDKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|213967233|ref|ZP_03395382.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1] gi|213928075|gb|EEB61621.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1] Length = 384 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/334 (58%), Positives = 249/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 28 LKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 87 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +W+ L + Sbjct: 88 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWNQLDE 147 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 148 ARKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 207 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 208 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 267 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD RYAI Sbjct: 268 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRPDSAHRPHANLITYVQDRPGHDLRYAI 327 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 328 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 361 >gi|221134345|ref|ZP_03560650.1| dTDP-glucose 4,6 dehydratase [Glaciecola sp. HTCC2999] Length = 357 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/338 (57%), Positives = 247/338 (73%), Gaps = 8/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL RYL+ +VL +DKLTYAGNL SL ++S + F+Q+DI Sbjct: 1 MKILVTGGAGFIGSALIRYLIQHTSHEVLNVDKLTYAGNLTSLSDVSDDPRYRFVQIDIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ FQPDA+++ AAESHVDRSIL ADEFI TNI+GTF LL+ R +W+ L Sbjct: 61 DSQALKQTFATFQPDAVMHLAAESHVDRSILAADEFIQTNIVGTFNLLDVARRYWAQLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK--------GLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 DK+ +FRF ISTDEVYG L LFSE PY PSSPY+A+KA+SD+LV AW Sbjct: 121 DKQSRFRFQHISTDEVYGDLPHPNDADFTGQLFSETTPYAPSSPYAASKAASDHLVNAWC 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+P+L++NCSNNYGPYHFPEKLIPL I +E + +YG G +RDWLYVEDHV A Sbjct: 181 RTYGLPILMTNCSNNYGPYHFPEKLIPLTILNALEQKTIPIYGKGTQIRDWLYVEDHVEA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LYLVL++G IGE YNIGG+NE +N+ +V + LD L+P+S S+ LIR ++DR GHDR Sbjct: 241 LYLVLQQGHIGETYNIGGHNEVENLQLVHILCDTLDKLVPQSTSYKTLIRHVDDRLGHDR 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID+SKI E+GW P+ +E GL KT+ W +D+ W Sbjct: 301 RYAIDASKIHKELGWKPRHTLEQGLQKTIKWVIDHRAW 338 >gi|20502681|gb|AAM22544.1|AF343089_1 putative dTDP-glucose-4-6-dehydratase [Aeromonas hydrophila] Length = 379 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 19 MKILVTGGAGFIGSAVVRHIIRDTNDSVINLDKLTYAGNLESLASVANSERYAFEQVDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + ++QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 79 NRAELDRVFAQYQPDAVMHLAAESHVDRSITGPADFIETNIVGTYMLLEAARAYWNGLDE 138 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 139 VRKAAFRFHHISTDEVYGDLPHPDEVAPGVALPLFTETTPYAPSSPYSASKASSDHLVRA 198 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 199 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQIRDWLYVEDHA 258 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G IGE YNIGG+NE++N+D+V I LLD ++PK+ S+ + I ++ DRPGH Sbjct: 259 RALYTVVTTGAIGETYNIGGHNEKQNLDVVHTICDLLDEMVPKAGSYRDQITYVADRPGH 318 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SK+ +E+ W PQE ESG+ KTV WYLDN W Sbjct: 319 DRRYAIDASKMSAELAWQPQETFESGIRKTVQWYLDNQQW 358 >gi|16611737|gb|AAL27322.1|AF402313_2 dTDP-D-glucose 4,6-dehydratase [Shigella boydii] Length = 361 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW QE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKQQETFESGIRKTVEWYLSNTKW 340 >gi|153010044|ref|YP_001371259.1| dTDP-glucose 4,6-dehydratase [Ochrobactrum anthropi ATCC 49188] gi|151561932|gb|ABS15430.1| dTDP-glucose 4,6-dehydratase [Ochrobactrum anthropi ATCC 49188] Length = 358 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 248/338 (73%), Gaps = 4/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+CR+L +D K+ V+ +DKLTYAGNL SL++I +SFL+ DIC Sbjct: 1 MNILVTGGAGFIGSAVCRHLASDPKVNVVNLDKLTYAGNLASLRQIENHPNYSFLEADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + AL+ + D +++ AAESHVDRSI G FI TNI+GTF LL +W L + Sbjct: 61 DDTSVLEALRAHEIDVVMHLAAESHVDRSIDGPGAFIETNIVGTFRLLNAALAYWRELPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEV+G L D G+F+E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 SRKSNFRFHHISTDEVFGDLPFDSGIFTEETPYQPSSPYSASKAASDHLVRAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+L+NCSNNYGP+HFPEKLIPL I ++ + +YG G NVRDWLYVEDH RAL LV Sbjct: 181 VVLTNCSNNYGPFHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLYVEDHARALALVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YNIGG ER N+ +V I +LD P++ S+ +LI F+ DRPGHDRRYAI Sbjct: 241 TGKLGESYNIGGRAERTNLSVVETICAILDKKRPRANGKSYADLITFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+GW PQE+ E+GL KT+ WYLDN WWW P+ Sbjct: 301 DASKIERELGWKPQESFETGLEKTIQWYLDNAWWWEPI 338 >gi|242240688|ref|YP_002988869.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech703] gi|242132745|gb|ACS87047.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech703] Length = 353 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 251/337 (74%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL I +S ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTADAVVNLDKLTYAGNLESLTTIDKSERYTFERVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + S ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE TR +WS L + Sbjct: 61 NRTALDSVFQQHQPDMVMHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEATRAYWSALPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+K LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 SRKSAFRFHHISTDEVYGDLEKTDDLFTESTPYAPSSPYSASKASSDHLVRAWYRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLIILNALAGKPLPVYGDGQQIRDWLFVEDHARALYNVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRY 294 +G+IGE YNIGG+NE+ NI++V I LL+ L+P+ H +LI +++DRPGHD RY Sbjct: 241 EGKIGETYNIGGHNEKTNIEVVETICQLLEELVPQKPQHVVFYKDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI E+ W P E+ ++G+ KTV WYL+N WW Sbjct: 301 AIDASKISRELNWKPHESFDTGIRKTVLWYLNNKSWW 337 >gi|330887874|gb|EGH20535.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. mori str. 301020] Length = 357 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/334 (58%), Positives = 248/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTADSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT++LLE R +WS L + Sbjct: 61 NREDLDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYVLLEAARSYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VRKASFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD L S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRQDSAHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWMPEESFESGIRKTVQWYLDNPEW 334 >gi|15804379|ref|NP_290419.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 EDL933] gi|12518652|gb|AAG58983.1|AE005610_7 dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EDL933] Length = 355 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/335 (58%), Positives = 241/335 (71%), Gaps = 6/335 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDR I G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRXIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDE YG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEXYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SKI E+GW PQE ESG+ KTV WYL N W Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESW 337 >gi|283785861|ref|YP_003365726.1| dTDP-glucose 4,6-dehydratase [Citrobacter rodentium ICC168] gi|282949315|emb|CBG88926.1| dTDP-glucose 4,6-dehydratase [Citrobacter rodentium ICC168] Length = 361 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 247/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ IDKLTYAGNL SL +IS SN + F + DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINIDKLTYAGNLESLNDISDSNRYVFERADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +W+ L Sbjct: 61 DATAMARIFTKYKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAREYWTALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L D LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 EKKQAFRFHHISTDEVYGDLPHPDEVDANSDLPLFTEKTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W T+G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTFGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKTLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE++N+D+V I LLD ++PK S+ + I ++ DRPGH Sbjct: 241 RALYTVVTQGKPGETYNIGGHNEKQNLDVVHTICDLLDEIVPKEGSYRDQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLANAQW 340 >gi|168481275|gb|ACA24767.1| RmlB [Shigella flexneri 6] Length = 361 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIG A+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGFAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK +FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKTRFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KT+ WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTLEWYLSNTKW 340 >gi|332159800|ref|YP_004296377.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607661|emb|CBY29159.1| dTDP-glucose 4,6-dehydratase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664030|gb|ADZ40674.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863551|emb|CBX73666.1| dTDP-glucose 4,6-dehydratase [Yersinia enterocolitica W22703] Length = 355 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++D V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIDDTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPD +++ AAESHVDRSI G FI TN++GT+ +LE R +W L + Sbjct: 63 RAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQPLDAE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWL+VEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LLD L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNERKNIEVVETICALLDELVPEKPAGIAHYRDLITFVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI+ E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 303 IDASKIERELGWRPQETFESGIRKTVLWYLNNKSWWQ 339 >gi|331647692|ref|ZP_08348784.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] gi|331043416|gb|EGI15554.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] Length = 361 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F D+C Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLVDVSDSERYVFEHADVC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEISYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAI + KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIGAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|288963204|ref|YP_003453483.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] gi|288915456|dbj|BAI76939.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] Length = 355 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/334 (58%), Positives = 247/334 (73%), Gaps = 1/334 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R L+ + V+ +DKLTYA NL+SL + + ++F QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRQLLAETDAFVVNVDKLTYAANLSSLPGAAGNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R QPDA+++ AAESHVDRSI G EFI TN++GTF LLE R +WS L + Sbjct: 63 AAELRRVFDTHQPDAVMHLAAESHVDRSIDGPGEFIQTNVVGTFRLLEAVRGYWSALPVE 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K++FRF ISTDEV+G+L D G F+E Y+P+SPYSA+KASSD+LV AW TYG+PV+ Sbjct: 123 RKERFRFHHISTDEVFGTLGDDGFFTETTAYSPNSPYSASKASSDHLVRAWHETYGLPVV 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGPYHFPEKLIPL I + + G + +YG G N+RDWLYVEDH RAL LVL+KG Sbjct: 183 LTNCSNNYGPYHFPEKLIPLMILKGLAGEKLPVYGKGDNIRDWLYVEDHARALRLVLEKG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 RIGE YNIGG+NER N+++V I LD + P H LI F+ DRPGHD+RYAID+ K Sbjct: 243 RIGESYNIGGHNERTNLEVVRAICAHLDDMDPAGAPHDRLISFVTDRPGHDKRYAIDAGK 302 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 I+ E+GW P E ESGL KTV WYL+N WW+ + Sbjct: 303 IERELGWTPLETFESGLRKTVAWYLENRDWWQAI 336 >gi|298353046|gb|ADI77024.1| RmlB [Escherichia coli] Length = 361 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ G YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGGTYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ K E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKTGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|16129981|ref|NP_416545.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. MG1655] gi|89108861|ref|AP_002641.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. W3110] gi|170081671|ref|YP_001730991.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. DH10B] gi|238901231|ref|YP_002927027.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli BW2952] gi|2506451|sp|P37759|RMLB1_ECOLI RecName: Full=dTDP-glucose 4,6-dehydratase 1 gi|1736731|dbj|BAA15883.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K12 substr. W3110] gi|1788353|gb|AAC75102.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. MG1655] gi|2665489|gb|AAB88398.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli] gi|169889506|gb|ACB03213.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. DH10B] gi|238861014|gb|ACR63012.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli BW2952] gi|260448859|gb|ACX39281.1| dTDP-glucose 4,6-dehydratase [Escherichia coli DH1] gi|315136675|dbj|BAJ43834.1| dTDP-glucose 4,6 dehydratase [Escherichia coli DH1] Length = 361 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGN SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI +GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|110666542|gb|ABG81781.1| RmlB [Escherichia coli] Length = 357 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/342 (56%), Positives = 245/342 (71%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNSNEALPLFTEMTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG NE+KN+D+V I LLD ++PK S+ + I ++ DRPGH Sbjct: 241 RALYTVMTQGVVGETYNIGGRNEKKNLDVVNTICDLLDEIVPKQGSYRDQIIYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+SKI E+GW PQE ESG+ KT+ WYL+N W R Sbjct: 301 DRRYAIDASKISDELGWKPQETFESGIRKTIGWYLNNLEWCR 342 >gi|153870011|ref|ZP_01999499.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] gi|152073521|gb|EDN70499.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] Length = 351 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/335 (57%), Positives = 251/335 (74%), Gaps = 3/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LI+TGGAGFIGSA+ RYL+N+ VL +DKLTYAGNL+SL I + + F Q+DIC Sbjct: 1 MKLIITGGAGFIGSAVIRYLMNETDTTVLNLDKLTYAGNLDSLITIKNNERYHFAQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++QP AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L Sbjct: 61 DGPALERVFADYQPQAIMHLAAESHVDRSIDGPAEFINTNIVGTYTLLETTRHYWQTLEN 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K++FRF +STDEVYGSL K GLF E Y P+SPYSA+KA+SD+LV +W HTY +PV Sbjct: 121 SEKEKFRFHHVSTDEVYGSLGKQGLFEESTCYQPNSPYSASKAASDHLVRSWHHTYKLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPY FPEKLIPL I +EG + +YG G+NVRDWLYV+DH RAL LVLK+ Sbjct: 181 ITTNCSNNYGPYQFPEKLIPLIILNALEGKPLPVYGKGENVRDWLYVDDHARALDLVLKQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G++GE YNIGG+NE+ N+++V + +LD ++P S H++LI F+ DRPGHD RYAID Sbjct: 241 GQLGETYNIGGHNEKTNLEVVQVLCNILDEILPNSPHKPHSQLITFVTDRPGHDLRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +SKI+ + W P+E ++GL KTV WYL+NN WW+ Sbjct: 301 ASKIQKTLNWTPKETFDTGLRKTVQWYLENNKWWQ 335 >gi|237732092|ref|ZP_04562573.1| dTDP-D-glucose-4,6-dehydratase [Citrobacter sp. 30_2] gi|226907631|gb|EEH93549.1| dTDP-D-glucose-4,6-dehydratase [Citrobacter sp. 30_2] Length = 361 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/340 (57%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL E+S+SN + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKDTQDTVVNVDKLTYAGNLESLAEVSESNRYYFEHTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + +PDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +W+ L Sbjct: 61 DKSAMERIFATHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYILLEAARGYWNELDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKQAFRFHHISTDEVYGDLPHPDEVVACNVLPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG+NE+KN+D+V I LLDA++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTQGIVGETYNIGGHNEKKNLDVVHTICDLLDAIVPKGGSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAAKISDELGWKPLETFESGIRKTVQWYLANQKW 340 >gi|9957845|gb|AAG09522.1|AF279621_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L + Sbjct: 61 DSAEIARIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYILLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL++V+ +G +GE YNIGG+NE+KN+++V I LLD ++PK S+ + I ++ DRPGH Sbjct: 241 RALHMVVTQGEVGETYNIGGHNEKKNLEVVHTICDLLDEIVPKEGSYRDQITYVGDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLANTQW 340 >gi|72003791|gb|AAZ65831.1| putative dTDP-glucose 4,6 dehydratase [Escherichia coli] gi|115503035|gb|ABI98960.1| RmlB [Escherichia coli] gi|332343822|gb|AEE57156.1| dTDP-glucose 4,6-dehydratase RfbB [Escherichia coli UMNK88] Length = 361 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEKLPLFIETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKMLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAI++ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAINAEKIGRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|110666559|gb|ABG81797.1| RmlB [Escherichia coli] Length = 357 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/342 (56%), Positives = 245/342 (71%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNSNEALPLFTEMTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG NE+KN+D+V I LLD ++PK S+ + I ++ DRPGH Sbjct: 241 RALYTVMTQGVVGETYNIGGRNEKKNLDVVNTICDLLDEIVPKQGSYRDQIIYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID+SKI E+GW PQE ESG+ KT+ WYL+N W R Sbjct: 301 DRRYAIDASKISDELGWKPQETFESGIRKTIGWYLNNLEWCR 342 >gi|168481239|gb|ACA24734.1| RmlB [Escherichia coli] Length = 361 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QP A+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPHAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ I E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAENIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|1710031|sp|P55293|RFBB_ECOLX RecName: Full=dTDP-glucose 4,6-dehydratase gi|799232|gb|AAC63612.1| RmlB [Escherichia coli] Length = 361 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/340 (58%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EIS S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + Q DA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P ++SNCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+VF I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|295148975|gb|ADF80974.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae] Length = 362 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/342 (55%), Positives = 249/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL ++ ++F QVDIC Sbjct: 1 MKILITGGAGFIGSAVVRHIINDTQDSVVNLDKLTYAGNLESLANVAGCERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E+QPDA+++ AAESHVDRSI G FI TNI+GTF LLE TR +W+ L Sbjct: 61 ERSELDRVFAEYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTFTLLEATREYWNKLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L + LF E PY PSSPYSA+KASSD+LV A Sbjct: 121 KAKQAFRFHHISTDEVYGDLPHPDEVADGSELPLFLETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGP+HFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPAIVTNCSNNYGPFHFPEKLIPLVILNALEGKQLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE++N+++V I +LD L+PK + E IR+++DRPGH Sbjct: 241 RALYKVVTEGKVGETYNIGGHNEKQNLEVVQAICSILDELVPKVTPYAEQIRYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAI+SSK++ E+GW P E E+GL KTV WYLDN W + Sbjct: 301 DRRYAINSSKMQRELGWTPIETFETGLRKTVQWYLDNQQWCK 342 >gi|146309303|ref|YP_001189768.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina ymp] gi|145577504|gb|ABP87036.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina ymp] Length = 353 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/338 (58%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R+L+ + +VL +DKLTYAGNL SL E++ S + F++ DI Sbjct: 1 MRILITGGAGFIGSALIRHLIRHTEHEVLNLDKLTYAGNLESLAEVAGSPRYRFVRADIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L EFQPDAI++ AAESHVDRSI G FI TNI+GT+ LLE TR +W L Sbjct: 61 DSALVAQTLAEFQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYALLESTRAYWQQLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ VRDWLYVEDH RAL V+ Sbjct: 181 VLITNCSNNYGPYHFPEKLIPLMILSALAGKPLPVYGNGQQVRDWLYVEDHARALLKVVC 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KN+D+V I LL+ L P S + +LI +++DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEQKNLDVVRAICALLEELAPHKPSGVARYEDLITYVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+ KI+ E+GW PQE ESGL KTV WYLDN W R Sbjct: 301 AIDAGKIERELGWVPQETFESGLRKTVQWYLDNLDWCR 338 >gi|269137463|ref|YP_003294163.1| dTDP-D-glucose 4,6-dehydratase [Edwardsiella tarda EIB202] gi|267983123|gb|ACY82952.1| dTDP-D-glucose 4,6-dehydratase [Edwardsiella tarda EIB202] gi|304557537|gb|ADM40201.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda FL6-60] Length = 356 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/339 (57%), Positives = 246/339 (72%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ D V+V+DKLTYAGNL SL + S+ ++F + DI D Sbjct: 5 RILVTGGAGFIGSAVVRHIIMDTADSVVVVDKLTYAGNLASLAPAAGSDRYAFERADIGD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L +++PDAI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +WS L Sbjct: 65 RAAMDRILAQYRPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYTLLEATRRYWSALPAA 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF ISTDEVYG L + LF ED PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 125 PRAAFRFHHISTDEVYGDLHGPQALFREDTPYAPSSPYSASKAASDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + + +YG+G VRDWLYVEDH RALY VL Sbjct: 185 LITNCSNNYGPYHFPEKLIPLTIINALAAKPLPVYGNGLQVRDWLYVEDHARALYRVLMT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 GR+GE YNIGG+NER+NID+V + LL ++P+ + +LI ++ DRPGHD RYA Sbjct: 245 GRVGETYNIGGHNERRNIDVVTTLCALLQEMVPEKPAGVRHFADLITYVADRPGHDVRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI+ E+GW PQE ESG+ KTV WYL N WWR + Sbjct: 305 IDASKIERELGWRPQETFESGIRKTVAWYLANERWWRAV 343 >gi|50083368|ref|YP_044878.1| dTDP-D-glucose-4,6-dehydratase [Acinetobacter sp. ADP1] gi|49529344|emb|CAG67056.1| dTDP-D-glucose-4,6-dehydratase [Acinetobacter sp. ADP1] Length = 356 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/336 (57%), Positives = 250/336 (74%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + VL +DKLTYAGNL SL +++ ++ + F Q DIC Sbjct: 2 MKILITGGAGFIGSAVVRHIIQNTDNTVLNVDKLTYAGNLESLAKVADNSRYQFSQTDIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + FQPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L+Q Sbjct: 62 DRAALDQLFETFQPDAVMHLAAESHVDRSITGPAAFIETNILGTYQLLEAARHYWNGLAQ 121 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK +FRF ISTDEVYG L+ + LF E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 122 DKKAEFRFHHISTDEVYGDLEGTEDLFVETTPYAPSSPYSASKASSDHLVRAWHRTYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+L+NCSNNYGPYHFPEKLIPL I + G + +YG+G +RDWLYVEDH RALY V+ Sbjct: 182 VVLTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQIRDWLYVEDHARALYKVVT 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 + ++GE YNIGG+NE++NID+V I LL+ L P ++ +LI +++DRPGHD RY Sbjct: 242 EAKVGETYNIGGHNEQQNIDVVKAICNLLEELAPNKPEGIANYQDLITYVKDRPGHDLRY 301 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKIK ++GW PQE ESGL KTV WYL N W Sbjct: 302 AIDASKIKKDLGWVPQETFESGLRKTVEWYLANQEW 337 >gi|306814835|ref|ZP_07448997.1| dTDP-glucose 4,6 dehydratase [Escherichia coli NC101] gi|305852229|gb|EFM52681.1| dTDP-glucose 4,6 dehydratase [Escherichia coli NC101] Length = 361 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 241/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL + S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADASDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGQAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|209693795|ref|YP_002261723.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|209693854|ref|YP_002261782.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|208007746|emb|CAQ77865.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|208007805|emb|CAQ77928.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] Length = 363 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+ R+++++ V+ +D LTYAGNL SL ++ S+ +SF VDIC Sbjct: 1 MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQVEASDRYSFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E+QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L+ Sbjct: 61 NRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEATRAYWNLLAD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG ++ +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVAQYLDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E+ ESG+ KTV WYLDN WW Sbjct: 301 AIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWW 337 >gi|260596016|ref|YP_003208587.1| dTDP-glucose 4,6-dehydratase [Cronobacter turicensis z3032] gi|260215193|emb|CBA27031.1| dTDP-glucose 4,6-dehydratase [Cronobacter turicensis z3032] Length = 365 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/337 (57%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGSA+ R+L+ + VLV+DKLTYAGNL SL ++Q + F+F QVDICD Sbjct: 13 RFLVTGGAGFIGSAVVRHLIQNTDHAVLVLDKLTYAGNLASLAPVAQDSRFAFEQVDICD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +F+PD +++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L+ Sbjct: 73 AQSLDRLFTQFKPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARRYWSELADA 132 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEVYG L F+E PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 133 EKTAFRFHHISTDEVYGDLHGLDDFFTETTPYAPSSPYSASKAGSDHLVRAWRRTYGLPT 192 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RAL LV + Sbjct: 193 LVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALCLVATE 252 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+KN+D+V I LL+ L P+ + ++ LI F++DRPGHD RYA Sbjct: 253 GVVGETYNIGGHNEQKNLDVVKTICALLEELAPQKPAGVDQYSSLITFVQDRPGHDLRYA 312 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI+ E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 313 IDASKIERELGWRPQETFESGMRKTVQWYLDNETWWK 349 >gi|302186453|ref|ZP_07263126.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae 642] Length = 357 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/334 (58%), Positives = 248/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ +S ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADKSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L + Sbjct: 61 NREDVDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYTLLEAARGYWNQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +G IGE YNIGG+NE++N+++V + LLD + P S H LI +++DRPGHD RYAI Sbjct: 241 EGEIGETYNIGGHNEKQNLEVVNTVCALLDQMRPDSAHRPHASLITYVQDRPGHDLRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 301 DASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 334 >gi|86147261|ref|ZP_01065576.1| dTDP-D-glucose 4,6-dehydratase [Vibrio sp. MED222] gi|85834976|gb|EAQ53119.1| dTDP-D-glucose 4,6-dehydratase [Vibrio sp. MED222] Length = 365 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N V+ +DKLTYAGNL SL E+ + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINKTTDSVVNVDKLTYAGNLESLIEVDSNGRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L + Sbjct: 61 NRSELDRVFSEHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYTLLEATREYWNKLEE 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 D K +FRF ISTDEVYG L + +F E Y PSSPYSA+KASSD+LV A Sbjct: 121 DAKAEFRFHHISTDEVYGDLPHPDEVPEGTELPMFLETTSYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KN+++V I +LD L+PK ++ E I +++DRPGH Sbjct: 241 RALYKVVSEGKVGETYNIGGHNEKKNLEVVNTICDILDTLVPKESAYAEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+GW P+E E+GL KTV WYLDN+ W Sbjct: 301 DRRYAIDSSKMQRELGWTPEETFETGLRKTVQWYLDNSAW 340 >gi|206577340|ref|YP_002241145.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae 342] gi|206566398|gb|ACI08174.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae 342] Length = 355 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/336 (58%), Positives = 243/336 (72%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 4 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ +K Sbjct: 64 GELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLTTEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L + F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 124 KSAFRFHHISTDEVYGDLHGSEDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 184 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+S +H +LI F+ DRPGHD RYAI Sbjct: 244 EPGETYNIGGHNERKNIEVVETICQLLEELAPHKPQSVAHYRDLITFVADRPGHDLRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 304 DASKIARELGWTPAETFTSGMRKTVAWYLANESWWR 339 >gi|168481316|gb|ACA24804.1| RmlB [Shigella dysenteriae] Length = 361 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 241/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDPERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QP A+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPHAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKISRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|306842188|ref|ZP_07474857.1| dTDP-glucose 4,6-dehydratase [Brucella sp. BO2] gi|306287775|gb|EFM59206.1| dTDP-glucose 4,6-dehydratase [Brucella sp. BO2] Length = 358 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/338 (57%), Positives = 249/338 (73%), Gaps = 4/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+CR+L +D +I V+ +DKLTYAGNL SL++I +SFLQ DIC Sbjct: 1 MNILVTGGAGFIGSAVCRHLASDPEINVVNLDKLTYAGNLASLRQIENYPNYSFLQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + AL+ + D +++ AAESHVDRSI G FI TNI+GTF LL +W L + Sbjct: 61 DDATVLDALRANEIDVVMHLAAESHVDRSIDGPAAFIETNIVGTFRLLNTALAYWRELPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K +FRF ISTDEV+G L D G+F+E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 PRKSRFRFHHISTDEVFGDLPFDSGIFTEETPYQPSSPYSASKAASDHLVRAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+L+NCSNNYGP+HFPEKLIPL I ++ + +YG G NVRDWLYVEDH RAL LV Sbjct: 181 VVLTNCSNNYGPFHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLYVEDHARALALVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G++GE YNIGG ER N+++V I +LD P+ S+ +LI F+ DRPGHDRRYAI Sbjct: 241 TGKLGESYNIGGRAERTNLNVVETICSILDKKRPRENGKSYADLITFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+GW PQE+ E+GL KT+ WYLDN WWW P+ Sbjct: 301 DASKIERELGWKPQESFETGLGKTIQWYLDNAWWWEPI 338 >gi|239503782|ref|ZP_04663092.1| dTDP-D-glucose-4,6-dehydratase [Acinetobacter baumannii AB900] Length = 358 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/336 (57%), Positives = 250/336 (74%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + VL +DKLTYAGNL SLKE+ Q++ + F Q DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKNTNNHVLNVDKLTYAGNLESLKEVDQNSRYQFSQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + KEFQPD +++ AAESHVDRSI G+ FI TNIIGT+ LLE R +W+ L+ Sbjct: 61 DRKALDVLFKEFQPDLVMHLAAESHVDRSITGSAAFIETNIIGTYQLLEAARHYWNNLND 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKIAFRFHHISTDEVYGDLEGTDDLFHETTSYAPSSPYSASKASSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH RALY V+ Sbjct: 181 VVITNCSNNYGPYHFPEKLIPLVILNALKGKALPIYGKGDQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 + ++GE YNIGG+NE+KNID+V I LL+ L P + +LI +++DRPGHD RY Sbjct: 241 EAKVGETYNIGGHNEQKNIDVVKAICELLEELAPNKPEGVNHYVDLITYVKDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KIK ++GW P+E+ E+GL KTV WYL+N W Sbjct: 301 AIDATKIKEDLGWVPEESFETGLRKTVEWYLNNQEW 336 >gi|197287133|ref|YP_002153005.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis HI4320] gi|194684620|emb|CAR46515.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis HI4320] Length = 357 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIDNTNDSVVVVDKLTYAGNLESLAPVANSERYAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S ++QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L +D Sbjct: 65 RAALDSLFAQYQPDIVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHFWSVLPED 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 KKAAFRFHHISTDEVYGDLEGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWLYVEDH RALYLV Sbjct: 185 LITNCSNNYGPYHFPEKLIPLIILNAISGKPLPVYGKGEQIRDWLYVEDHARALYLVATT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 + G+ YNIGG+NER+NID+V I LL+ L P + + +LI ++DRPGHD RYA Sbjct: 245 AQPGKTYNIGGHNERRNIDVVTTICELLEELHPNKPAGVAKYVDLITHVKDRPGHDLRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI +E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 305 IDAAKIAAELGWKPQETFESGIRKTVLWYLNNQTWWQ 341 >gi|327395969|dbj|BAK13391.1| dTDP-glucose 4,6-dehydratase RffG [Pantoea ananatis AJ13355] Length = 356 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/339 (56%), Positives = 252/339 (74%), Gaps = 7/339 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGSAL R+L+N+ + V+V+DKL+YAGNL+SL ++++ F F +VDICDR Sbjct: 4 FLITGGAGFIGSALVRFLINETEHNVVVVDKLSYAGNLSSLACVTENPRFKFERVDICDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S + QPD +++ AAE+HVDRSI G FI TNI+GT+ LLE R +W+ L+ D+ Sbjct: 64 AALDSVFSQHQPDCVMHLAAETHVDRSIDGPIAFIETNIVGTYQLLEAARHYWNALTGDR 123 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F F ISTDEV+G LD F+ED PY PSSPYSATKASSD+LV AW TYG+PV+ Sbjct: 124 KKNFLFHHISTDEVFGDLDDTSAFFTEDTPYAPSSPYSATKASSDHLVRAWLRTYGLPVI 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ VRDWLYVEDH RALY V+ +G Sbjct: 184 VTNCSNNYGPYHFPEKLIPLTIINALAGKSLPVYGNGQQVRDWLYVEDHARALYTVVTRG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-----YSHTELIRFIEDRPGHDRRYA 295 + GE YNIGG+NER+NI++V I LL+ L P+ +++ +LI ++ DRPGHD+RYA Sbjct: 244 KTGETYNIGGHNERQNIEVVETICCLLEELAPERKLTGLHNYKDLISYVTDRPGHDQRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P E ESG+ KTV W+LDN WW+ + Sbjct: 304 IDARKIERELGWTPLETFESGMRKTVSWFLDNATWWQAI 342 >gi|315125543|ref|YP_004067546.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] gi|315014056|gb|ADT67394.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding protein [Pseudoalteromonas sp. SM9913] Length = 367 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 196/345 (56%), Positives = 247/345 (71%), Gaps = 13/345 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+IVTGGAGFIGSAL R ++ + V+ +DKLTYAGNL SLK I + ++F QVDIC Sbjct: 1 MRIIVTGGAGFIGSALIRNIIENTNDSVINLDKLTYAGNLESLKLIDNNERYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + LK+F+PDAI++ AAESHVDRSI G EFI TNI+GT+ LLE R +W+ L+ Sbjct: 61 NRAELDRVLKQFEPDAIMHLAAESHVDRSITGPAEFIQTNIVGTYNLLEAAREYWNTLTD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-------------LFSEDMPYNPSSPYSATKASSDYL 167 K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+L Sbjct: 121 TAKKAFRFHHISTDEVYGDLPHPDEQDENTLGKELLLFTEKTAYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P++++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPIIITNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G++GE YNIGG+NE++NI++V I +L+ L+PK S+ E I F+ DR Sbjct: 241 DHARALYKVVTEGKVGETYNIGGHNEKQNIEVVKTICSILNELVPKKSSYAEQITFVNDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 PGHDRRYAID+SK+ E+ W P E E+GL KTV WYLDN W + Sbjct: 301 PGHDRRYAIDASKMSEELNWQPVETFETGLRKTVQWYLDNQTWCK 345 >gi|191167723|ref|ZP_03029531.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] gi|76366002|gb|ABA42227.1| RmlB [Escherichia coli] gi|190902236|gb|EDV61977.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] Length = 361 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTHDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSISGPAAFIETNIVGTYVLLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNDTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGP HFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPNHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|110773112|ref|XP_001123275.1| PREDICTED: dTDP-glucose 4,6-dehydratase-like [Apis mellifera] Length = 357 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/354 (55%), Positives = 254/354 (71%), Gaps = 12/354 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSA+ RYL+N+ ++L +DKLTYAGNL SL I+ ++ + F Q DI Sbjct: 1 MNILITGGAGFIGSAVIRYLINETDHKILNVDKLTYAGNLESLATIANNSRYHFCQADIS 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I K+FQPD +++ AAESHVDRSI + EFI TNI+GTF LLE +R +W L + Sbjct: 61 DQAHITQLFKQFQPDTVMHLAAESHVDRSISSSVEFIQTNIVGTFQLLEISRHYWENLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K+ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+ Sbjct: 121 EKQHLFRFHHISTDEVYGDLSDLSSELFTESTPYAPSSPYSASKASSDHLVRAWHRTYGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+++NCSNNYGPYHFPEKLIPL I ++G + +YG+G+ +RDWLYVEDH RALY V+ Sbjct: 181 PVIITNCSNNYGPYHFPEKLIPLTILNALQGKKLPVYGNGEQIRDWLYVEDHARALYQVV 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRR 293 K + G YNIGG+NE+KNID+V I LLD L P S+ +LI F+ DRPGHD R Sbjct: 241 TKAKAGSTYNIGGHNEQKNIDVVKNICTLLDELAPNKILGIKSYKDLITFVPDRPGHDVR 300 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 YAID+SKIK ++GW P+EN +SGL KTV WYL+N W ++ +Y KW Sbjct: 301 YAIDASKIKHDLGWEPEENFQSGLRKTVLWYLNNQDWVNHIFT-----GEYQKW 349 >gi|183597263|ref|ZP_02958756.1| hypothetical protein PROSTU_00507 [Providencia stuartii ATCC 25827] gi|188023578|gb|EDU61618.1| hypothetical protein PROSTU_00507 [Providencia stuartii ATCC 25827] Length = 358 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/336 (57%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL I + ++F+Q DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTNDTVINVDKLTYAGNLESLTSICEDPRYTFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + QPDAI++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L Sbjct: 61 DSAAITNIFNLHQPDAIMHLAAESHVDRSIDGPSEFIQTNIIGTYTLLEAARQYWNQLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKATFRFHHISTDEVYGDLESTTDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+H+PEKLIPL I +EG + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPFHYPEKLIPLMILNALEGKPLPVYGNGQQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NID+V I +L+ L+P S+++LI ++ DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEKANIDVVKTICNILEELVPNKPNNIQSYSDLITYVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KIK+E+ W P E E+GL KTV WYL NN W Sbjct: 301 AIDATKIKNELNWVPAETFETGLRKTVEWYLANNEW 336 >gi|54873717|gb|AAV41066.1| RmlB [Shigella boydii] Length = 361 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LL+ R +WS L Sbjct: 61 DAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLDAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEKLPLFIETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKMLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAI++ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAINAEKIGRELGWKPQETFESGIRKTVEWYLANAKW 340 >gi|88858863|ref|ZP_01133504.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas tunicata D2] gi|88819089|gb|EAR28903.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas tunicata D2] Length = 359 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/342 (57%), Positives = 252/342 (73%), Gaps = 11/342 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL+ I+QS +SF QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHVINNTEDSVVNVDKLTYAGNLESLESIAQSERYSFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I+ ++ QPD I++ AAESHVDRSI G EFI TNIIGT+ LLE R +W L Sbjct: 61 DAVAIKRVFEQHQPDIIMHLAAESHVDRSIDGPAEFIGTNIIGTYTLLEAARQYWLALDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L+ + LF+E Y PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VRQAHFRFHHISTDEVYGDLEGPEDLFTETTAYAPSSPYSASKAASDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG+G +RDWLYVEDH RALYLV Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALEGKTLPVYGNGLQIRDWLYVEDHARALYLVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTE--------LIRFIEDRPG 289 KG +GE YNIGG+NE+ NID+V I LL+ L+P + YS LI +++DRPG Sbjct: 241 KGVVGETYNIGGHNEKANIDVVNTICALLEELVPSNPYSKASGSEQGFAGLITYVKDRPG 300 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 HD RYAID++KI +E+GW P+E+ ESG+ KTV WYLDN WW Sbjct: 301 HDVRYAIDANKIANELGWTPEESFESGIRKTVQWYLDNQAWW 342 >gi|218558920|ref|YP_002391833.1| dTDP-glucose 4,6 dehydratase [Escherichia coli S88] gi|160419867|emb|CAN87672.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli S88] gi|218365689|emb|CAR03425.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Escherichia coli S88] Length = 360 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 241/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLETARQYWSSLDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 ARKATFRFHHISTDEVYGDLPHPDEVAQGSILPLFTEQTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG GE YNIGG+NE+KN+D+V I LLD ++PK+ S+ E I ++ DRPGH Sbjct: 241 RALYTVVTKGIPGETYNIGGHNEKKNLDVVHTICDLLDEIVPKAVSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTSW 340 >gi|289626549|ref|ZP_06459503.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649197|ref|ZP_06480540.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aesculi str. 2250] gi|330869504|gb|EGH04213.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 360 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 252/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPTGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|168481327|gb|ACA24814.1| RmlB [Escherichia coli] Length = 361 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + ++ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSIVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFALHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EEKNNFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLAICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|113969661|ref|YP_733454.1| dTDP-glucose 4,6 dehydratase [Shewanella sp. MR-4] gi|113884345|gb|ABI38397.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-4] Length = 359 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/343 (55%), Positives = 250/343 (72%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ + V+ +DKLTYAGNL SL + S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIISNTQDSVINLDKLTYAGNLESLVSVEASERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +++PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W L Sbjct: 61 DRAELDRVFSQYKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEAARHYWMQLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-------------DKGLFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+L Sbjct: 121 ERKVAFRFHHISTDEVYGDLPHPDEQEGQVVNQELPLFTETTPYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKQLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G+IGE YNIGG+NE++N+++V I +LDAL+PK+ S+ E I ++ DR Sbjct: 241 DHARALYKVVTEGQIGETYNIGGHNEKQNLEVVQTICTILDALVPKASSYAEQITYVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+SKI +E+ W PQE E+GL KTV WYL N W Sbjct: 301 PGHDRRYAIDASKISNELNWQPQETFETGLCKTVEWYLANQEW 343 >gi|254421040|ref|ZP_05034764.1| dTDP-glucose 4,6-dehydratase [Brevundimonas sp. BAL3] gi|196187217|gb|EDX82193.1| dTDP-glucose 4,6-dehydratase [Brevundimonas sp. BAL3] Length = 351 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/334 (56%), Positives = 247/334 (73%), Gaps = 2/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ +VLV DKLTYAG L+SL+ ++ SN +SF+Q DIC Sbjct: 1 MRILVTGGAGFIGSALVRRLIEHTDHEVLVFDKLTYAGVLSSLQPVTSSNRYSFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + AL+EF+PD + + AAESHVDRSI G FI TN++GTF++L + +W L + Sbjct: 61 DADVVSRALREFKPDVVAHLAAESHVDRSIDGPGAFIQTNMVGTFVMLNQALGYWRGLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEV+GSL + G F+E Y+P SPYSA+KA SD+LV AWGHTYG+PV Sbjct: 121 AEKAGFRFHHISTDEVFGSLGEDGFFTETTSYDPRSPYSASKAGSDHLVRAWGHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I R + G + +YGDG NVRDWL+V+DH RAL V + Sbjct: 181 LVTNCSNNYGPYHFPEKLIPLIIIRALNGEPLPVYGDGSNVRDWLFVDDHARALQAVFET 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDS 298 G GE YN+GGN ERKNI++V I +LD L PK+ + + I ++ DRPGHD RYAID+ Sbjct: 241 GTPGETYNVGGNAERKNIEVVTAICSILDRLRPKAEGQYADQITYVTDRPGHDHRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI++++GW P E G+ +TV WYL+N WW+ Sbjct: 301 SKIRADLGWVPSVTFEEGIERTVTWYLENPSWWQ 334 >gi|288937784|ref|YP_003441843.1| dTDP-glucose 4,6-dehydratase [Klebsiella variicola At-22] gi|288892493|gb|ADC60811.1| dTDP-glucose 4,6-dehydratase [Klebsiella variicola At-22] Length = 355 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/336 (58%), Positives = 242/336 (72%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 4 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ +K Sbjct: 64 GELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLATEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L + F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 124 KSAFRFHHISTDEVYGDLHGSEDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 184 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+S H +LI F+ DRPGHD RYAI Sbjct: 244 EPGETYNIGGHNERKNIEVVETICQLLEELAPHKPQSVVHYHDLITFVADRPGHDLRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 304 DASKIARELGWTPAETFTSGMRKTVAWYLANESWWR 339 >gi|148976932|ref|ZP_01813587.1| dTDP-D-glucose 4,6-dehydratase [Vibrionales bacterium SWAT-3] gi|145963806|gb|EDK29066.1| dTDP-D-glucose 4,6-dehydratase [Vibrionales bacterium SWAT-3] Length = 365 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 248/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL E+ + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTSNSVVNVDKLTYAGNLESLVEVDTNARYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E +PDA+++ AAESHVDRSI G FI TN++GT+ LLE TR +W+ L + Sbjct: 61 NRSELDRVFAEHKPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTLLEATREYWNNLEK 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K +FRF ISTDEVYG L + +F E PY PSSPYSA+KASSD+LV A Sbjct: 121 RAKAEFRFHHISTDEVYGDLPHPDEVPEGTELPMFLETTPYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KNI++V I +LDAL+PK + E I +++DRPGH Sbjct: 241 RALYKVVTEGKVGETYNIGGHNEKKNIEVVNTICDILDALVPKEPKYAEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+ W P E E+GL KTV WYLDN+ W Sbjct: 301 DRRYAIDSSKMQRELNWTPNETFETGLRKTVQWYLDNSKW 340 >gi|253991611|ref|YP_003042967.1| dtdp-glucose 4,6-dehydratase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783061|emb|CAQ86226.1| dtdp-glucose 4,6-dehydratase [Photorhabdus asymbiotica] Length = 356 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 251/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++++ + V+V+D LTYAGNL SL ++ S+ ++F +VDIC Sbjct: 3 RILITGGAGFIGSAVVRHIIDNTQDSVVVVDSLTYAGNLESLASVADSSRYAFERVDICQ 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + +++QPD +++ AAESHVDRSI G F+ TNI+GT++LLE R +W LS++ Sbjct: 63 REALDRVFEQYQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYVLLEAARAFWQKLSKE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEVYG L + G F+E+ PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KQVTFRFHHISTDEVYGDLHGEDGFFTEETPYAPSSPYSASKASSDHLVRAWHRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALYLV+ K Sbjct: 183 IITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGEGKQIRDWLYVEDHARALYLVVTK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G YNIGG+NERKNID+V I LL+ P+ + + +LI + DRPGHD RYA Sbjct: 243 AEPGRTYNIGGHNERKNIDVVCAICELLEEFCPEKPANIAYYRDLIAHVTDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAAKIEHELGWKPQETFESGIRKTVQWYLENENWWR 339 >gi|290513180|ref|ZP_06552542.1| dTDP-glucose 4,6-dehydratase [Klebsiella sp. 1_1_55] gi|289774391|gb|EFD82397.1| dTDP-glucose 4,6-dehydratase [Klebsiella sp. 1_1_55] Length = 355 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/336 (58%), Positives = 242/336 (72%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 4 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ +K Sbjct: 64 GELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNILGTYTLLEAARSWWNTLATEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L + F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 124 KSAFRFHHISTDEVYGDLHGSEDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 184 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+S H +LI F+ DRPGHD RYAI Sbjct: 244 EPGETYNIGGHNERKNIEVVETICQLLEELAPHKPQSVVHYHDLITFVADRPGHDLRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 304 DASKIARELGWTPAETFTSGMRKTVAWYLANESWWR 339 >gi|148549141|ref|YP_001269243.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida F1] gi|148513199|gb|ABQ80059.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida F1] Length = 358 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/334 (56%), Positives = 248/334 (74%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ V+ +DKLTYAGNL SL+ ++Q+ ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIISNTADSVVNVDKLTYAGNLESLQSVAQNPRYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE + +E QPDA+++ AAESHVDRSI G FI TNIIGT++LLE R +WS L + Sbjct: 61 SREEMDRVFREHQPDAVMHLAAESHVDRSITGPSAFIETNIIGTYVLLEAARGYWSGLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKSAFRFHHISTDEVYGDLEGPEDLFTEATPYQPSSPYSASKASSDHLVRAWARTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+HFPEKLIPL I +EG + +YG G +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPFHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 +G +GE YNIGG+NE++NI++V + LLD L P S H L+ ++ DRPGHD RYAI Sbjct: 241 EGEVGETYNIGGHNEKQNIEVVRTVCELLDELRPDSAFAPHFNLVTYVTDRPGHDVRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P+E ESG+ KTV WYL N W Sbjct: 301 DASKIQRELGWVPEETFESGIRKTVEWYLSNAEW 334 >gi|307340806|gb|ADN43866.1| RmlB [Escherichia coli] Length = 361 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 241/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TNI+GT++ LE R +WS L Sbjct: 61 DAAAMVRIFALHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVPLEAARNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNENKNIDVVLAICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|283832536|ref|ZP_06352277.1| dTDP-glucose 4,6-dehydratase [Citrobacter youngae ATCC 29220] gi|291072203|gb|EFE10312.1| dTDP-glucose 4,6-dehydratase [Citrobacter youngae ATCC 29220] Length = 360 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E+S+++ + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKNTQDTVVNVDKLTYAGNLESLAEVSENHRYYFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + ++PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +W+ L Sbjct: 61 DKAAMERIFATYKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARGYWNGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKQAFRFHHISTDEVYGDLPHPDEVAAGGVFPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG +GE YNIGG+NE+KN+D+V I LLD ++PK S+ + + ++ DRPGH Sbjct: 241 RALYTVVTKGVVGETYNIGGHNEKKNLDVVHTICDLLDEIVPKEGSYRDQLTYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++KI +E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAAKISNELGWKPQETFESGIRKTVEWYLSNTQW 340 >gi|56415781|ref|YP_152856.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364711|ref|YP_002144348.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130038|gb|AAV79544.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096188|emb|CAR61784.1| UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 355 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 249/339 (73%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETVDAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS D Sbjct: 63 RASLERVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSAFDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTSYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ +LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHDLITFVDDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 303 IDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 341 >gi|323497087|ref|ZP_08102110.1| dTDP-glucose 4,6-dehydratase [Vibrio sinaloensis DSM 21326] gi|323317931|gb|EGA70919.1| dTDP-glucose 4,6-dehydratase [Vibrio sinaloensis DSM 21326] Length = 352 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL+++ S + F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINETQDSVVNLDKLTYAGNLESLQDVESSARYHFECVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W LS Sbjct: 61 DRGKLERVFDEHQPDIVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLETARSYWQSLSS 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K QFRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW T+G P Sbjct: 121 ERKRQFRFHHISTDEVYGDLEDTESLFTEQTPYAPSSPYSASKASSDHLVRAWLRTFGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YGDG+ +RDWLYVEDH RALY V Sbjct: 181 TLITNCSNNYGPYHFPEKLIPLMILNALEGKSLPVYGDGKQIRDWLYVEDHARALYTVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 KG++GE YNIGG+NE N+++V I L++ L P ++ ELI F+EDRPGHD RY Sbjct: 241 KGKVGETYNIGGHNELTNLEVVHRICELMEELCPDKPNGIGAYAELITFVEDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N WW Sbjct: 301 AIDASKIERELGWKPEETFESGICKTVRWYLSNRIWW 337 >gi|271499807|ref|YP_003332832.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] gi|270343362|gb|ACZ76127.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] Length = 354 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 244/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+ R+++ + +V+V+D LTYAGNL SLKE++ F F +V+IC Sbjct: 1 MNILVTGGAGFIGSAVVRHIIQHTQDRVMVVDCLTYAGNLASLKEVAADPRFLFEKVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + FQPDA+++ AAESHVDRSI G FI TNI GT+ LLE R +WS L Q Sbjct: 61 DRAALDRVFTTFQPDAVMHLAAESHVDRSIDGPSAFIETNITGTYTLLEAARQYWSALPQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K+ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VRKEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAASDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TMVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGEGNQIRDWLFVEDHARALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NERKNI++V I LLD L P+ S + ELI + DRPGHD RY Sbjct: 241 TGEVGETYNIGGHNERKNIEVVQTICALLDELRPEKPSGIRHYAELITHVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+GW P+E ESG+ KTV WYL N WWR Sbjct: 301 AIDASKIYRELGWKPKETFESGIRKTVEWYLANETWWR 338 >gi|298484710|ref|ZP_07002812.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160743|gb|EFI01762.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 360 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 251/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + + +LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPTGVAQYRDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|168481427|gb|ACA24906.1| RmlB [Shigella dysenteriae] Length = 361 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 241/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++S S + DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKNTQDSVVNVDKLTYAGNLESLADVSDSKRYVLEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + Q DA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQADAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTERTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|229587855|ref|YP_002869974.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens SBW25] gi|229359721|emb|CAY46569.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens SBW25] Length = 360 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R+L+ + + QVL +DKLTYAGNL SL I+ + + F+Q DI Sbjct: 1 MRILITGGAGFIGSALIRHLIENTEHQVLNLDKLTYAGNLESLTSIASDSRYEFVQADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L F+P AI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W L + Sbjct: 61 DQATVSAVLARFEPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWQKLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 PAKRAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VLL+NCSNNYGP+HFPEKLIPL I + G + +YGDG VRDWL+VEDH RAL V+ Sbjct: 181 VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LL+ L P+ + +LI F++DRPGHD+RY Sbjct: 241 EGVVGETYNIGGHNEQKNIDVVRGICALLEELAPQRPAGVAQFADLITFVKDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIERELGWVPEETFESGLRKTVQWYLDNLEWCR 338 >gi|192361310|ref|YP_001983888.1| dTDP-glucose 4,6-dehydratase [Cellvibrio japonicus Ueda107] gi|190687475|gb|ACE85153.1| dTDP-glucose 4,6-dehydratase [Cellvibrio japonicus Ueda107] Length = 356 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/341 (57%), Positives = 253/341 (74%), Gaps = 9/341 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + +V+ +DKLTYAGNL SL I Q+ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDEVINLDKLTYAGNLESLASIDQNPRYRFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+ + E QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE +R +W L + Sbjct: 61 NRQALDRIFHEHQPDAVMHLAAESHVDRSIDGPAAFIETNILGTYQLLEASRDYWKNLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 AGKAAFRFHHISTDEVYGDLEGPEDLFTETTPYAPSSPYSASKASSDHLVRAWRRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPVYGKGNQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS------HTELIRFIEDRPGHDR 292 +G++GE YNIGG+NE++NI++V +I LLD L P + + H ELI F+ DRPGHD Sbjct: 241 EGKVGETYNIGGHNEKQNIEVVHKICELLDELRPLNSTNLPIKYHKELITFVTDRPGHDL 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWR 332 RYAID+SKIK E+GW P+E +SG+ KTV WYL+N NW R Sbjct: 301 RYAIDASKIKRELGWVPEETFDSGIRKTVIWYLENLNWAHR 341 >gi|51594528|ref|YP_068719.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pseudotuberculosis IP 32953] gi|153949720|ref|YP_001399183.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|170026239|ref|YP_001722744.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|186893526|ref|YP_001870638.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis PB1/+] gi|51587810|emb|CAH19412.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pseudotuberculosis IP 32953] gi|152961215|gb|ABS48676.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|169752773|gb|ACA70291.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|186696552|gb|ACC87181.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis PB1/+] Length = 355 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/337 (57%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QP+ +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS + Sbjct: 63 RSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLSVE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LLD L+P + + +LI +++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWR 339 >gi|302382271|ref|YP_003818094.1| dTDP-glucose 4,6-dehydratase [Brevundimonas subvibrioides ATCC 15264] gi|302192899|gb|ADL00471.1| dTDP-glucose 4,6-dehydratase [Brevundimonas subvibrioides ATCC 15264] Length = 352 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/335 (55%), Positives = 249/335 (74%), Gaps = 3/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ +VLV DKLTYAG L+SL+ ++ S+ ++F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALVRRLIEHSDHEVLVFDKLTYAGVLSSLEPVAASDRYAFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ALK+F+PD + + AAESHVDRSI G F+ TN++GTF++L +T +W L Sbjct: 61 DPDAVAKALKDFRPDVVAHLAAESHVDRSIDGPGAFVQTNLVGTFVMLNQTLGYWRGLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEV+GSL + G F+E PY+P SPYSA+KA SD+LV AWGHTYG+PV Sbjct: 121 VEKAAFRFHHISTDEVFGSLGEDGFFTETTPYDPRSPYSASKAGSDHLVRAWGHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I R + G + +YGDG NVRDWL+V+DH RAL V + Sbjct: 181 LVTNCSNNYGPYHFPEKLIPLIIIRALNGEPLPVYGDGSNVRDWLFVDDHARALQAVFET 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G GE YN+GGN ER+NI++V I +LD L P++ ++ + I F+ DRPGHD RYAID Sbjct: 241 GTPGETYNVGGNAERRNIEVVTAICTILDRLRPRADGKAYADQITFVADRPGHDHRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +SKI++++GW P E G+ +T+ WYL+N WW+ Sbjct: 301 ASKIRNDLGWTPSVTFEQGIEQTIAWYLENKTWWQ 335 >gi|212550126|gb|ACJ26778.1| dTDP-D-glucose-4,6-dehydratase [Salmonella enterica subsp. salamae] Length = 356 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/342 (56%), Positives = 249/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLCDISKSNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + +PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +W+ L+ Sbjct: 61 DKAAMEHIFAAHKPDAVMHLAAESHVDRSITGPANFIETNIVGTYVLLEAARGYWNELNA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L LF+E+M Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKLAFRFHHISTDEVYGDLPHPDEVQAGSTLPLFTENMAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGRGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG +GE YNIGG+NE+KN+D+V I LLD ++PK S+ + + ++ DRPGH Sbjct: 241 RALYTVVTKGVVGETYNIGGHNEKKNLDVVHTICDLLDEIVPKEGSYRDQLTYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID++KI E+GW PQE ESG+ KT+ WYL+N W R Sbjct: 301 DRRYAIDAAKISDELGWKPQETFESGIRKTIDWYLNNIEWCR 342 >gi|71065769|ref|YP_264496.1| dTDP-glucose 4,6-dehydratase [Psychrobacter arcticus 273-4] gi|71038754|gb|AAZ19062.1| dTDP-glucose 4,6-dehydratase [Psychrobacter arcticus 273-4] Length = 360 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/336 (57%), Positives = 242/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSA+ R+++ + VL IDKLTYAGNL SL +S S + F Q DIC Sbjct: 7 MNILITGGAGFIGSAVIRHIITNTTDTVLNIDKLTYAGNLESLASVSDSTHYQFSQTDIC 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I + +FQPD +++ AAESHVDRSI G+ F+ TNIIGT LLE R ++ LS Sbjct: 67 DQPAIEAHFTDFQPDIVMHLAAESHVDRSITGSAAFMQTNIIGTHTLLEVARHYYETLSG 126 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG LD LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 127 DKKSNFRFHHISTDEVYGDLDNDDDLFTETTSYAPSSPYSASKASSDHLVRAWDRTYGLP 186 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV Sbjct: 187 VVITNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGNGQQIRDWLYVEDHARALYLVAT 246 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NE NI++V I LL+ L P S+ ELI +++DRPGHD RY Sbjct: 247 EGKTGETYNIGGHNEHTNIEVVQTICALLEELAPNKPHGITSYAELITYVKDRPGHDLRY 306 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKI+ +GW PQE SGL +TV WYL+N+ W Sbjct: 307 AIDASKIQQALGWTPQETFSSGLRQTVLWYLNNSEW 342 >gi|123440570|ref|YP_001004564.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087531|emb|CAL10312.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 355 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/337 (57%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPD +++ AAESHVDRSI G FI TN++GT+ +LE R +W L Sbjct: 63 RAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQPLDAK 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWL+VEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LLD L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNERKNIEVVETICALLDELVPEKPAGIARYRDLITFVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI+ E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 303 IDASKIERELGWRPQETFESGIRKTVLWYLNNKSWWQ 339 >gi|291615362|ref|YP_003525519.1| dTDP-glucose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] gi|291585474|gb|ADE13132.1| dTDP-glucose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] Length = 355 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/330 (57%), Positives = 241/330 (73%), Gaps = 1/330 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGSA+ R +ND V+ +DKLTYAGNL SL +S + + F QVDICD Sbjct: 3 KTLVTGGAGFIGSAVIRQFINDTACSVVNVDKLTYAGNLQSLASVSDNPRYRFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +E QPDA+++ AAESHVDRSI G +FI TNIIGT+ LLE R +W+ L + Sbjct: 63 AAEVARVFREHQPDAVMHLAAESHVDRSISGPADFIQTNIIGTYTLLEAARGYWNSLDGE 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF ISTDEVYGSL D G F+E+ Y P+SPYSA+KASSD+LV AW HTYG PV+ Sbjct: 123 RKAGFRFHHISTDEVYGSLGDTGFFTEETAYEPNSPYSASKASSDHLVRAWHHTYGFPVV 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YG G N+RDWLYV+DH RAL LVL++G Sbjct: 183 TTNCSNNYGPYHFPEKLIPLVILNAVNGKPLPIYGKGDNIRDWLYVDDHARALRLVLERG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 ++GE YNIGG NE+ N+++V I LD L P+ H +LI ++ DRPGHD+RYAID++K Sbjct: 243 KLGETYNIGGWNEKTNLEVVLAICAALDELRPQGAPHNKLITYVADRPGHDKRYAIDATK 302 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + ++GW PQE E+GL KTV WYL N W Sbjct: 303 LARDLGWKPQETFETGLRKTVEWYLQNTDW 332 >gi|257483685|ref|ZP_05637726.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 360 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 252/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L + Sbjct: 61 DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAYWLRLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPTGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|9957834|gb|AAG09513.1|AF279619_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 361 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL E+S+S+ + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKDTQDTVVNVDKLTYAGNLESLTEVSESHRYHFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +W+ L Sbjct: 61 DKAAMERIFVTHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARSYWNALDV 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKAAFRFHHISTDEVYGDLPHPDEVSAGSVLPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG+NE+KN+D+V I LLD ++PK ++ + + ++ DRPGH Sbjct: 241 RALYTVVTQGVVGETYNIGGHNEKKNLDVVQTICDLLDEIVPKEGAYRDQLIYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++KI E+GW PQE ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDAAKISDELGWKPQETFESGIRKTVEWYLNNTQW 340 >gi|241759011|ref|ZP_04757123.1| dTDP-glucose 4,6-dehydratase [Neisseria flavescens SK114] gi|241320832|gb|EER57065.1| dTDP-glucose 4,6-dehydratase [Neisseria flavescens SK114] Length = 355 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIQNTQDSVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 303 IDAAKIGRELGWKPQETFESGIRKTVQWYLDNKTWWQ 339 >gi|157376125|ref|YP_001474725.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] gi|157318499|gb|ABV37597.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] Length = 352 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 251/337 (74%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++N + V+ +DKLTYAGNL SL+EI S+ + F Q+DIC Sbjct: 1 MKILITGGAGFIGSAVIRHIINHTQDSVVNLDKLTYAGNLESLQEIENSSRYCFEQLDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ ++ +PD +++ AAESHVDRSI G FI TNI+GT+ LLE TR +W L + Sbjct: 61 DSVELKRVFEQHKPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYALLEATRAYWIALDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKAAFRFHHISTDEVYGDLEGTVDLFTETTPYEPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWLYVEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGDGMQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P ++++LI F++DRPGHD RY Sbjct: 241 EGMVGETYNIGGHNEKANIEVVTTLCSLLEELVPNKPAGVSTYSDLILFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+ W P+E ESG+ KTV WYL+N WW Sbjct: 301 AIDASKIERELSWKPEETFESGIRKTVLWYLNNKEWW 337 >gi|330806985|ref|YP_004351447.1| dTDP-glucose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375093|gb|AEA66443.1| dTDP-glucose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 360 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/336 (58%), Positives = 245/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R+L+ D QVL +DKLTYAGNL SL I + + F+Q DI Sbjct: 1 MRILITGGAGFIGSALIRHLILDTGHQVLNLDKLTYAGNLESLSSIDHDSRYEFVQADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L F+PDAI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W L + Sbjct: 61 DQSTVSAVLARFKPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYSLLEATRAYWQTLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E Y PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 PQKRAFRFHHISTDEVYGDLHGVDDLFTETTAYAPSSPYSASKAASDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VLL+NCSNNYGP+HFPEKLIPL I + G + +YG+GQ VRDWL+VEDH RAL V+ Sbjct: 181 VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGQQVRDWLFVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LL+ L P+ E LI F++DRPGHD RY Sbjct: 241 EGAVGETYNIGGHNEQKNIDVVRSICALLEELAPRKPEGVEHYADLISFVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKI+ E+GW PQE E+GL KTV WYL+N W Sbjct: 301 AIDASKIERELGWTPQETFETGLRKTVQWYLENLLW 336 >gi|160425304|gb|ABX39496.1| RmlB [Aeromonas hydrophila] Length = 361 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 247/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D V+ DKLTYAGNL SL E+S S+ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIWDTNDSVINFDKLTYAGNLESLAEVSASDRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 61 NRGELDRVFALHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYVLLEAARAYWNDLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 TRKAAFRFHHISTDEVYGDLPHPDEVSAGEALPLFTETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G IGE YNIGG+NE++N+D+V + LLD ++PK+ S+ + I ++ DRPGH Sbjct: 241 RALYKVVTSGVIGETYNIGGHNEKQNLDVVHTVCDLLDDMVPKAGSYRDQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SK+ +E+ W PQE ESG+ KTV WYLDN W Sbjct: 301 DRRYAIDASKMSAELDWQPQETFESGIRKTVQWYLDNQQW 340 >gi|255068257|ref|ZP_05320112.1| dTDP-glucose 4,6-dehydratase [Neisseria sicca ATCC 29256] gi|255047527|gb|EET42991.1| dTDP-glucose 4,6-dehydratase [Neisseria sicca ATCC 29256] Length = 354 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 251/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +++ S ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIQNTQDSVINLDKLTYAGNLESLTDVADSPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W +S + Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMSSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 303 IDAAKIGRELGWKPQETFESGIRKTVQWYLNNKTWWQ 339 >gi|152972781|ref|YP_001337927.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957630|gb|ABR79660.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 357 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 240/336 (71%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 6 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ + Sbjct: 66 AELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLAMAQ 125 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 126 KSAFRFHHISTDEVYGDLHGSDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 186 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+ +H +LI F+ DRPGHD RYAI Sbjct: 246 EPGETYNIGGHNERKNIEVVETICQLLEELAPDKPQGVAHYRDLIAFVADRPGHDLRYAI 305 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 306 DASKIARELGWTPAETFTSGMRKTVAWYLANEAWWR 341 >gi|289672185|ref|ZP_06493075.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae FF5] gi|330980591|gb|EGH78694.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 360 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+ W P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDKELDWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|227357175|ref|ZP_03841544.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis ATCC 29906] gi|227162707|gb|EEI47674.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis ATCC 29906] Length = 357 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/337 (57%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIDNTNDSVVVVDKLTYAGNLESLAPVANSERYAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S ++QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L +D Sbjct: 65 RATLDSLFAQYQPDIVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHFWSVLPED 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ F+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 KKAAFRFHHISTDEVYGDLEGTDDFFTETTSYAPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWLYVEDH RALYLV Sbjct: 185 LITNCSNNYGPYHFPEKLIPLIILNAISGKPLPVYGKGEQIRDWLYVEDHARALYLVATT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 + G+ YNIGG+NER+NID+V I LL+ L P + + +LI ++DRPGHD RYA Sbjct: 245 AQPGKTYNIGGHNERRNIDVVTTICELLEELHPNKPAGVAKYVDLITHVKDRPGHDLRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI +E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 305 IDAAKIAAELGWKPQETFESGIRKTVLWYLNNQTWWQ 341 >gi|301643908|ref|ZP_07243937.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|301077728|gb|EFK92534.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] Length = 354 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/338 (56%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + +V V+D LTYAGNL SL+ ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVVDCLTYAGNLESLEPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+PD +++ AAESHVDRSI G FI TN+IGTF LLE R +WS L + Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSELGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD RY Sbjct: 241 EGKSGETYNIGGHNERKNIDVVRTICAILDKVVAQKPGNITHFADLITFVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|262040897|ref|ZP_06014123.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041786|gb|EEW42831.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 357 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 240/336 (71%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 6 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ + Sbjct: 66 AELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLATAQ 125 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 126 KSAFRFHHISTDEVYGDLHGSDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 186 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+ +H +LI F+ DRPGHD RYAI Sbjct: 246 EPGETYNIGGHNERKNIEVVETICQLLEELAPDKPQGVAHYRDLIAFVADRPGHDLRYAI 305 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 306 DASKIARELGWTPAETFTSGMRKTVAWYLANEAWWR 341 >gi|312958394|ref|ZP_07772915.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] gi|311287458|gb|EFQ66018.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] Length = 360 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 251/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R+L+ + +VL +DKLTYAGNL SL I+ ++ + F+Q DI Sbjct: 1 MRILITGGAGFIGSALIRHLIQHTEHEVLNLDKLTYAGNLESLASIASNSRYEFVQADII 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L F+PDAI++ AAESHVDRSI G +F+ TNI+GT+ LLE R +W L++ Sbjct: 61 DQATVSAVLARFEPDAIMHLAAESHVDRSIDGPSDFVQTNIVGTYSLLEAARGYWQQLAE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 PARRAFRFHHISTDEVYGDLHGVDDLFTEATPYAPSSPYSASKAASDHLVRAWRHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VLL++CSNNYGP+HFPEKLIPL I + G+ + +YGDG VRDWLYVEDH RAL V+ Sbjct: 181 VLLTHCSNNYGPFHFPEKLIPLVILNALAGNPLPVYGDGLQVRDWLYVEDHARALLSVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LL+ L P+ ++ +LI F++DRPGHD+RY Sbjct: 241 QGVVGETYNIGGHNEQKNIDVVRSICALLEELAPQHPQGVNTYIDLITFVKDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW P E E+GL KTV WYLDN W R Sbjct: 301 AIDASKIQRELGWEPMETFETGLRKTVQWYLDNLEWCR 338 >gi|330989099|gb|EGH87202.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 360 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 252/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L + Sbjct: 61 DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEGTRAYWLRLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPTGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|59803191|gb|AAX07738.1| dTDP-D-glucose-4,6-dehydratase [Escherichia coli] Length = 379 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/340 (55%), Positives = 247/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E+S S+ ++F DIC Sbjct: 20 VKILVTGGAGFIGSAVVRHIIKNTQDDVVNVDKLTYAGNLESLSEVSDSDRYAFEHADIC 79 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L + +PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 80 DKDAMDRILAKHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARAYWSTLDE 139 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 140 QAKKAFRFHHISTDEVYGDLPHPDEHPASTELSLFTETTAYAPSSPYSASKASSDHLVRA 199 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 200 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKVLPIYGKGDQIRDWLYVEDHA 259 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE++N+D+V I LLD ++PK S+ + I ++ DRPGH Sbjct: 260 RALYTVVTQGKPGETYNIGGHNEKQNLDVVHTICDLLDEIVPKEGSYRDQITYVTDRPGH 319 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++KI +E+GW PQE ESG+ KTV WYL N W Sbjct: 320 DRRYAIDANKISAELGWTPQETFESGIRKTVEWYLTNTEW 359 >gi|268593353|ref|ZP_06127574.1| dTDP-glucose 4,6-dehydratase [Providencia rettgeri DSM 1131] gi|291311050|gb|EFE51503.1| dTDP-glucose 4,6-dehydratase [Providencia rettgeri DSM 1131] Length = 352 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/336 (57%), Positives = 247/336 (73%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAGFIGSA+ R+++N+ V+ IDKLTYAGNL SL IS+S+ + F Q DIC Sbjct: 1 MKIFVTGGAGFIGSAVIRHIINNTNDSVINIDKLTYAGNLESLASISESSNYIFAQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I+ + QPDA+++ AAESHVDRSI G EFI TNIIGT+ LLE R +W+ L Sbjct: 61 DSAAIKQLFELHQPDAVMHLAAESHVDRSIDGPSEFIQTNIIGTYTLLEAARHYWNQLPS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EKKSAFRFHHISTDEVYGDLESTTDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYH+PEKLIPL I +EG + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHYPEKLIPLIILNALEGKPLPVYGNGQQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G+I E YNIGG+NE+ NID+V I +LD L+P + + ELI ++ DRPGHD RY Sbjct: 241 EGKISETYNIGGHNEKANIDVVKTICSILDELVPNKPNGINHYEELITYVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KIK+E+ W P+E E+GL KTV WYL N+ W Sbjct: 301 AIDATKIKNELNWVPEETFETGLRKTVEWYLANSEW 336 >gi|320326580|gb|EFW82630.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. B076] gi|320331098|gb|EFW87070.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. race 4] gi|330871969|gb|EGH06118.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. race 4] Length = 360 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/338 (57%), Positives = 253/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L + Sbjct: 61 DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAYWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGIAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E +SGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFKSGLRKTVQWYLDNLDWCR 338 >gi|300721431|ref|YP_003710702.1| dTDP-glucose 4,6-dehydratase [Xenorhabdus nematophila ATCC 19061] gi|297627919|emb|CBJ88465.1| dTDP-glucose 4,6-dehydratase [Xenorhabdus nematophila ATCC 19061] Length = 356 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 249/338 (73%), Gaps = 7/338 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++N + V+V+D LTYAGNL SL +++ ++F QVDIC Sbjct: 3 RILITGGAGFIGSAVVRHIINQTEDSVVVVDSLTYAGNLESLAPVAEHPRYAFEQVDICQ 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + +++QPDA+++ AAESHVDRSI G FI TNIIGT+ILLE R +W L ++ Sbjct: 63 REALDRVFQQYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYILLEAARTYWQQLDEE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEVYG LD + F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KRAAFRFHHISTDEVYGDLDGQESFFTETTPYAPSSPYSASKASSDHLVRAWRRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I G + +YG G+ +RDWLYVEDH RAL+LV+ K Sbjct: 183 VITNCSNNYGPYHFPEKLIPLMILNAQAGKPLPVYGKGEQIRDWLYVEDHARALHLVVTK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 GE YNIGG+NER+NID+V I LL+ L P+ + + +LI ++ DRPGHD RYA Sbjct: 243 AVPGETYNIGGHNERRNIDVVETICGLLEELCPEKPAGVSHYRDLITYVTDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWR 332 ID++KI+ E+GW PQE ESG+ KTV WYL + NWW R Sbjct: 303 IDAAKIERELGWTPQETFESGIRKTVQWYLGHENWWCR 340 >gi|261365322|ref|ZP_05978205.1| dTDP-glucose 4,6-dehydratase [Neisseria mucosa ATCC 25996] gi|288566255|gb|EFC87815.1| dTDP-glucose 4,6-dehydratase [Neisseria mucosa ATCC 25996] Length = 361 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/337 (56%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +++ S ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIKNTQDSVVNLDKLTYAGNLESLTDVADSLRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W +S + Sbjct: 63 RAELGRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARTYWQQMSSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KQAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 303 IDAAKIGRELGWKPQETFESGIRKTVQWYLDNKTWWQ 339 >gi|84386900|ref|ZP_00989924.1| dTDP-D-glucose 4,6-dehydratase [Vibrio splendidus 12B01] gi|84378190|gb|EAP95049.1| dTDP-D-glucose 4,6-dehydratase [Vibrio splendidus 12B01] Length = 371 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/346 (54%), Positives = 249/346 (71%), Gaps = 16/346 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL E+ + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTSDSVINVDKLTYAGNLESLVEVDSNEHYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L + Sbjct: 61 NRSELDRVFVEHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYTLLEATREYWNTLEE 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------------DKGLFSEDMPYNPSSPYSATKASS 164 K +FRF ISTDEVYG L + +F E Y PSSPYSA+KASS Sbjct: 121 SAKSEFRFHHISTDEVYGDLPHPDDLETGTEPSANEELPMFLETTSYEPSSPYSASKASS 180 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D+LV AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL Sbjct: 181 DHLVRAWLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWL 240 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +VEDH RALY V+ +G++GE YNIGG+NE+KN+++V I +LD L+PK ++ E I ++ Sbjct: 241 FVEDHARALYKVVTEGKVGETYNIGGHNEKKNLEVVSTICEILDTLVPKESAYAEQITYV 300 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +DRPGHDRRYAIDSSK++ E+GW P+E ++GL KTV WYLDN+ W Sbjct: 301 QDRPGHDRRYAIDSSKMQRELGWTPEETFKTGLRKTVQWYLDNSTW 346 >gi|322832467|ref|YP_004212494.1| dTDP-glucose 4,6-dehydratase [Rahnella sp. Y9602] gi|321167668|gb|ADW73367.1| dTDP-glucose 4,6-dehydratase [Rahnella sp. Y9602] Length = 354 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 242/338 (71%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSA+ R++++ VLV+D LTYAGNL SLK + + F +IC Sbjct: 1 MNILITGGAGFIGSAVVRHIISATNDNVLVVDSLTYAGNLESLKLVENDPRYRFSLANIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + EF+PDA+++ AAESHVDRSI G FI TNI GT+ LLE R +WS L Sbjct: 61 DRAALDAIFSEFKPDAVMHLAAESHVDRSIDGPSAFIDTNITGTYTLLEAARHYWSALED 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG P Sbjct: 121 EKKILFRFHHISTDEVYGDLHGTTELFTETTPYAPSSPYSASKAASDHLVRAWNRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I I G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLVILNAIAGKPLPVYGDGAQIRDWLFVEDHARALYEVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 KG IGE YNIGG+NERKNID+V I +LD L+ P +H ELI F++DRPGHD RY Sbjct: 241 KGVIGETYNIGGHNERKNIDVVTTICAILDQLVSEKPAGLTHFNELITFVKDRPGHDMRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW P E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDASKIERELGWKPVETFESGILKTVKWYLENETWWK 338 >gi|330970570|gb|EGH70636.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 360 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTDHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQTRVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+ KI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDAGKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|319638875|ref|ZP_07993633.1| dTDP-glucose 4,6-dehydratase [Neisseria mucosa C102] gi|317399779|gb|EFV80442.1| dTDP-glucose 4,6-dehydratase [Neisseria mucosa C102] Length = 355 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDIC+ Sbjct: 3 KILVTGGAGFIGSAVVRHIIQNTQDSVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 303 IDAAKIARELGWKPQETFESGIRKTVQWYLDNKTWWQ 339 >gi|126175093|ref|YP_001051242.1| dTDP-glucose 4,6 dehydratase [Shewanella baltica OS155] gi|125998298|gb|ABN62373.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS155] Length = 356 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 186/340 (54%), Positives = 250/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL + ++ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRFIINNTQDSVINVDKLTYAGNLESLLSVEKNQRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W L Sbjct: 61 DRVELDRVFNKYQPDAVMHLAAESHVDRSITGPGDFIQTNIVGTYTLLEAARHYWMQLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 ERKSAFRFHHISTDEVYGDLPHPDEVVPGSELALFTEITPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+IGE YNIGG+NE++N+++V I +LD+L+PK+ + E I ++ DRPGH Sbjct: 241 RALYKVVTEGKIGETYNIGGHNEKQNLEVVQTICSILDSLVPKATPYAEQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++K+ +E+ W P+E E+GL KT+ WYL N W Sbjct: 301 DRRYAIDATKMSNELKWQPEETFETGLRKTIEWYLANQEW 340 >gi|117621343|ref|YP_857412.1| dTDP-glucose 4,6 dehydratase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562750|gb|ABK39698.1| dTDP-glucose 4,6-dehydratase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 361 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + VL +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQNTNDSVLNLDKLTYAGNLESLASVASSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 61 NRAELERVFAQHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYMLLEVARAYWNGLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 VRKAAFRFHHISTDEVYGDLPHPDEVALGVALPLFTETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTVVTNCSNNYGPYHFPEKLIPLVILNSLDGKPLPVYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G IGE YNIGG+NE++N+++V I LLD ++PK+ S+ + I ++ DRPGH Sbjct: 241 RALYTVVTTGVIGETYNIGGHNEKQNLEVVHTICDLLDEMVPKTGSYHDQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SK+ E+ W PQE ESG+ KTV WYLDN W Sbjct: 301 DRRYAIDASKMSVELAWQPQETFESGIRKTVQWYLDNQQW 340 >gi|238021506|ref|ZP_04601932.1| hypothetical protein GCWU000324_01406 [Kingella oralis ATCC 51147] gi|237868486|gb|EEP69492.1| hypothetical protein GCWU000324_01406 [Kingella oralis ATCC 51147] Length = 354 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N + V+ +DKLTYAGNL+S+ ++ S ++F+Q DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINHTQDSVVNLDKLTYAGNLDSVSSVANSERYAFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R ++ L + Sbjct: 61 DRAALDKIFAEHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFTLLEAARAYYQTLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 NRQAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWRRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYG YHFPEKLIP I ++G + +YGDG+ +RDWLYVEDH RALYLV+ Sbjct: 181 TIVTNCSNNYGCYHFPEKLIPHMILNALDGKPLPVYGDGKQIRDWLYVEDHARALYLVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +GRIGE YNIGG NE++NI++V I LL+ L P+ +H +LI + DR GHD RY Sbjct: 241 QGRIGETYNIGGFNEKQNIEVVRTICQLLEELAPNKPQGIAHYADLITHVTDRAGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 301 AIDASKIQRELGWAPQETFESGIRKTVQWYLDNQAWWQ 338 >gi|317494814|ref|ZP_07953225.1| dTDP-glucose 4,6-dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917139|gb|EFV38487.1| dTDP-glucose 4,6-dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 354 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/337 (56%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ D V+V+DKLTYAGNL SL +S S+ ++F QVDIC+ Sbjct: 3 RILVTGGAGFIGSAVVRHIIADTNNSVVVVDKLTYAGNLESLTPVSDSDRYAFEQVDICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPD +++ AAESHVDRSI G FI TNI+GT+ +LE R +W+ L + Sbjct: 63 RTELDRVFAQYQPDYVMHLAAESHVDRSIDGPAAFIETNIVGTYTILEAARQYWNGLDEQ 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 123 RKSAFRFHHISTDEVYGDLHGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG+G +RDWLYVEDH RALYLV+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLIILNALAGKPLPVYGNGAQIRDWLYVEDHARALYLVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NERKNID+V + LL+ L+P + +LI ++ DRPGHD RYA Sbjct: 243 GVIGETYNIGGHNERKNIDVVKTVCTLLEELVPSKPDGVEHYADLITYVTDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI+ E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDAAKIERELGWRPQETFESGIRKTVEWYLANESWWK 339 >gi|239993211|ref|ZP_04713735.1| dTDP-glucose 4,6 dehydratase [Alteromonas macleodii ATCC 27126] Length = 360 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/342 (56%), Positives = 243/342 (71%), Gaps = 10/342 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+L+ND V+ +DKLTYAGNL SL +S S+ +SF QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRHLINDTDHTVVNLDKLTYAGNLESLTPVSDSDRYSFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ QPD I++ AAESHVDRSI G EFI TN++GT+ LLE+ R +WS L DK Sbjct: 65 EEVKRVFNTHQPDIIMHLAAESHVDRSIDGPGEFIQTNVVGTYTLLEQARAYWSALEGDK 124 Query: 123 KDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K F+F ISTDEVYG L + LF+E PY PSSPYSA+KASSD LV +W Sbjct: 125 KAGFKFHHISTDEVYGDLPHPDEVEPGTELPLFTETTPYAPSSPYSASKASSDQLVRSWL 184 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +P L++NCSNNYGPYHFPEKLIPL I + G + +YG G +RDWLYVEDH RA Sbjct: 185 RTYKLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGKGNQIRDWLYVEDHARA 244 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L +V G IGE YNIGG+NE++NI++V I +LD + PK + E I +++DRPGHD Sbjct: 245 LVVVALNGEIGETYNIGGHNEKQNIEVVQTICSILDEVKPKDTKYAEQITYVQDRPGHDM 304 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RYAID+SKI+ E+GW PQE ESG+ KTV WYL N WW+ + Sbjct: 305 RYAIDASKIERELGWKPQETFESGIRKTVEWYLANEGWWKAV 346 >gi|254669573|emb|CBA03564.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha153] Length = 386 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL+ ++ ++F QVDICD Sbjct: 34 KILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESLESVANHPRYAFEQVDICD 93 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W + + Sbjct: 94 RAALDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWHDMPPE 153 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 154 KKAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 213 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 214 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 273 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 274 GVVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 333 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 334 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 370 >gi|22124281|ref|NP_667704.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis KIM 10] gi|45442935|ref|NP_994474.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Microtus str. 91001] gi|108806154|ref|YP_650070.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Antiqua] gi|108810267|ref|YP_646034.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|145600730|ref|YP_001164806.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides F] gi|167469845|ref|ZP_02334549.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis FV-1] gi|21957051|gb|AAM83955.1|AE013637_5 dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM 10] gi|45437802|gb|AAS63351.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Microtus str. 91001] gi|108773915|gb|ABG16434.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Nepal516] gi|108778067|gb|ABG12125.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Antiqua] gi|145212426|gb|ABP41833.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Pestoides F] Length = 357 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++QP+ +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS + Sbjct: 65 SSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLSVE 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 AKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ + Sbjct: 185 LVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LLD L+P + + +LI +++DRPGHD RYA Sbjct: 245 GVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 305 IDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWR 341 >gi|209696410|ref|YP_002264341.1| dTDP-glucose 4,6 dehydratase [Aliivibrio salmonicida LFI1238] gi|208010364|emb|CAQ80702.1| dTDP-glucose 4,6-dehydratase [Aliivibrio salmonicida LFI1238] Length = 371 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/346 (54%), Positives = 248/346 (71%), Gaps = 16/346 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL I + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLASIESNERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W+ LS+ Sbjct: 61 DRAELDRVFAQCKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNTLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------------DKGLFSEDMPYNPSSPYSATKASS 164 D K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASS Sbjct: 121 DAKKAFRFHHISTDEVYGDLPHPDDIEDGTEPSANKELPLFTETTSYEPSSPYSASKASS 180 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D+LV AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL Sbjct: 181 DHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWL 240 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +VEDH RALY V+ +G++GE YNIGG+NE++N+++V I +LD+L+PK + E I ++ Sbjct: 241 FVEDHARALYKVVTEGKVGETYNIGGHNEKQNLEVVQTICAILDSLVPKESKYQEQITYV 300 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRPGHDRRYAIDSSK++ E+ W P E E+GL KT+ WYL+N W Sbjct: 301 TDRPGHDRRYAIDSSKMQRELSWTPLETFETGLKKTIEWYLNNQEW 346 >gi|89094082|ref|ZP_01167025.1| dTDP-D-glucose 4;6-dehydratase [Oceanospirillum sp. MED92] gi|89081557|gb|EAR60786.1| dTDP-D-glucose 4;6-dehydratase [Oceanospirillum sp. MED92] Length = 350 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 255/337 (75%), Gaps = 5/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSAL RY++N +++ +D LTYAGNL+SL S+ + ++F QVDIC Sbjct: 1 MKLLVTGGAGFIGSALVRYILNATDDEIVNVDCLTYAGNLDSLPCASEFDRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + QPDA+++ AAESHVDRSI G +FI TNI+GTF LL+ +R ++ LS+ Sbjct: 61 DHQSLTKVFAKHQPDAVMHLAAESHVDRSIEGPAQFIQTNIVGTFNLLDVSRRYYENLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+ FRF ISTDEVYG LD+G F+E+ PY PSSPYSA+KASSD+LV AWG TY +PV Sbjct: 121 EKRSIFRFHHISTDEVYGDLDEGGFFTEETPYAPSSPYSASKASSDHLVRAWGRTYNLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIP I + G + +YGDGQ +RDWLYVEDH +ALY V+ + Sbjct: 181 VITNCSNNYGPYHFPEKLIPHMILNALSGKELPIYGDGQQIRDWLYVEDHAKALYTVVTQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG NE+ N+++V +I LL+ L+P+ S + +LI +++DRPGHD RYA Sbjct: 241 GGLGETYNIGGYNEKTNLEVVHKICELLEELVPEKPSGVKHYVDLITYVKDRPGHDLRYA 300 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI +E+GW P+E+ +SG+ KTV WYL N WW Sbjct: 301 IDASKITAELGWKPEESFDSGIRKTVQWYLQNESWWE 337 >gi|271499222|ref|YP_003332247.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] gi|270342777|gb|ACZ75542.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] Length = 355 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++S + F +DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKNTADSVINVDKLTYAGNLESLADVSSHGRYEFKHIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++S + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R++WS L Sbjct: 61 DAVALKSVFETCQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARVYWSNLEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 TQKSAFRFHHISTDEVYGDLEGTDSLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ N+D+V I LL+ L+P+ ++ +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANVDVVKTICTLLEELVPQKPAGIDAYQDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+ KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 301 AIDAGKIGRELGWKPQETFESGIRKTVEWYLNNRSWW 337 >gi|330012105|ref|ZP_08307271.1| dTDP-glucose 4,6-dehydratase [Klebsiella sp. MS 92-3] gi|328533965|gb|EGF60620.1| dTDP-glucose 4,6-dehydratase [Klebsiella sp. MS 92-3] Length = 357 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 239/336 (71%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 6 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ + Sbjct: 66 AELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLAMAQ 125 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 126 KSAFRFHHISTDEVYGDLHGSDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I G + +YG+GQ +RDWLYVEDH RALYLV +G Sbjct: 186 ITNCSNNYGPYHFPEKLIPLTILTARAGKPLPVYGNGQQIRDWLYVEDHARALYLVATRG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+ +H +LI F+ DRPGHD RYAI Sbjct: 246 EPGETYNIGGHNERKNIEVVETICQLLEELAPDKPQGVAHYRDLIAFVADRPGHDLRYAI 305 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 306 DASKIARELGWTPAETFTSGMRKTVAWYLANEAWWR 341 >gi|307130154|ref|YP_003882170.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] gi|306527683|gb|ADM97613.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] Length = 354 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 241/338 (71%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+ R+++ + +V+V+D LTYAGNL SLKE++ F F +V+IC Sbjct: 1 MNILVTGGAGFIGSAVVRHIIQHTQDRVMVVDCLTYAGNLASLKEVASDPRFLFEKVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + FQPDA+++ AAESHVDRSI G FI TNI GT+ LLE R +WS L + Sbjct: 61 DRAGLDRVFATFQPDAVMHLAAESHVDRSIDGPSAFIETNITGTYTLLEAARQYWSALPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 ASRAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAASDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGQGNQIRDWLYVEDHARALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NERKNI++V I LLD L P+ + + ELI + DRPGHD RY Sbjct: 241 TGEVGETYNIGGHNERKNIEVVKTICALLDELRPEKPAGIRHYDELITHVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+GW PQE ESG+ KTV WYL N WWR Sbjct: 301 AIDASKIYRELGWKPQETFESGIRKTVEWYLANEAWWR 338 >gi|290477129|ref|YP_003470044.1| dTDP-glucose 4,6-dehydratase [Xenorhabdus bovienii SS-2004] gi|289176477|emb|CBJ83286.1| dTDP-glucose 4,6-dehydratase [Xenorhabdus bovienii SS-2004] Length = 356 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++N + V+V+D LTYAGNL SL + ++F QVDIC Sbjct: 3 RILITGGAGFIGSAVVRHIINHTEDSVVVVDSLTYAGNLESLASVVDHPRYAFEQVDICQ 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE +R +W L Q+ Sbjct: 63 RDALDRVFQQYQPDAVMHLAAESHVDRSIDGPAAFIETNIMGTYVLLEASRAFWQQLDQE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEVYG L D+G F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KQAAFRFHHISTDEVYGDLHGDEGFFTETTPYAPSSPYSASKASSDHLVRAWRRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG G+ +RDWLYVEDH RAL+LV Sbjct: 183 VITNCSNNYGPYHFPEKLIPLIILNALAGKPLPVYGKGEQIRDWLYVEDHARALHLVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 GE YNIGG+NER+NID+V I LL+ L P + + +LI + DRPGHD RYA Sbjct: 243 AEPGENYNIGGHNERRNIDVVETICELLEELRPVKPAGIVCYRDLITHVADRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAAKIERELGWTPQETFESGIRKTVQWYLENENWWR 339 >gi|37528475|ref|NP_931820.1| dTDP-glucose 4,6-dehydratase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787913|emb|CAE17030.1| dTDP-glucose 4,6-dehydratase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 356 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++N+ + V+V+D LTYAGNL SL ++ S ++F QVDIC Sbjct: 3 RILITGGAGFIGSAVVRHIINNTEDSVVVVDSLTYAGNLASLAPVADSPRYAFEQVDICQ 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W L+++ Sbjct: 63 RGALDRVFEQYQPDCVMHLAAESHVDRSIDGPTAFIETNIVGTYTLLEAARAFWQKLNEE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEVYG L ++G F+E PY PSSPYSA+KASSD+LV AW TYG+PV Sbjct: 123 KQAVFRFHHISTDEVYGDLHGEEGFFTETTPYAPSSPYSASKASSDHLVRAWHRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALYLV+ + Sbjct: 183 IITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGEGKQIRDWLYVEDHARALYLVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G+ YNIGG+NERKNID+V I LL+ P+ + +LI ++ DRPGHD RYA Sbjct: 243 AEPGKTYNIGGHNERKNIDVVCAICELLEEFCPEKPVGIAYYRDLITYVADRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++K++ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAAKVERELGWRPQETFESGIRKTVQWYLENENWWR 339 >gi|296103688|ref|YP_003613834.1| dTDP-glucose 4,6-dehydratase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058147|gb|ADF62885.1| dTDP-glucose 4,6-dehydratase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 362 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL+E+S S+ + F DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTQDCVVNVDKLTYAGNLESLREVSDSDRYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE +R +WS L + Sbjct: 61 DKIAMEKIFAAHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLETSRAYWSALDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 RAKSTFRFHHISTDEVYGDLPHPDEHHSSSSLPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGP+HFPEKLIPL I +E + +YG G +RDWLYVEDH Sbjct: 181 WIRTYGLPGIVTNCSNNYGPFHFPEKLIPLVILNALENKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY VL G+ GE YNIGG NE+KNI++V I LLD ++PK+ S+ + I ++ DRPGH Sbjct: 241 RALYAVLTTGKTGETYNIGGYNEKKNIEVVHTICDLLDEIVPKTTSYRDQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI +E+GW PQE ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDARKITAELGWKPQETFESGIRKTVEWYLNNQEW 340 >gi|153997082|ref|ZP_02022215.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CA88-4125] gi|162418754|ref|YP_001605113.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Angola] gi|165926287|ref|ZP_02222119.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939693|ref|ZP_02228236.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. IP275] gi|166009628|ref|ZP_02230526.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213636|ref|ZP_02239671.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402080|ref|ZP_02307559.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420831|ref|ZP_02312584.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425992|ref|ZP_02317745.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930865|ref|YP_002348740.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CO92] gi|229837195|ref|ZP_04457360.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides A] gi|229839555|ref|ZP_04459714.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900118|ref|ZP_04515255.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. India 195] gi|229900435|ref|ZP_04515564.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|270488791|ref|ZP_06205865.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM D27] gi|294505525|ref|YP_003569587.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Z176003] gi|115349476|emb|CAL22449.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CO92] gi|149289388|gb|EDM39466.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CA88-4125] gi|162351569|gb|ABX85517.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Angola] gi|165912383|gb|EDR31017.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. IP275] gi|165921811|gb|EDR39008.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991550|gb|EDR43851.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205309|gb|EDR49789.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960960|gb|EDR56981.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048554|gb|EDR59962.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055140|gb|EDR64939.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682454|gb|EEO78541.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|229686898|gb|EEO78977.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. India 195] gi|229695921|gb|EEO85968.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706138|gb|EEO92147.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides A] gi|262363591|gb|ACY60312.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis D106004] gi|262367519|gb|ACY64076.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis D182038] gi|270337295|gb|EFA48072.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM D27] gi|294355984|gb|ADE66325.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Z176003] gi|320013537|gb|ADV97108.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 355 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++QP+ +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS + Sbjct: 63 SSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLSVE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LLD L+P + + +LI +++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWR 339 >gi|91794014|ref|YP_563665.1| dTDP-glucose 4,6 dehydratase [Shewanella denitrificans OS217] gi|91716016|gb|ABE55942.1| dTDP-glucose 4,6-dehydratase [Shewanella denitrificans OS217] Length = 362 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/346 (55%), Positives = 243/346 (70%), Gaps = 16/346 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS++ RY++N+ K V+ +DKLTYAGNL SL I + F QVDIC Sbjct: 1 MKILVTGGAGFIGSSVVRYIINNTKDTVINLDKLTYAGNLESLVSIENDERYIFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + KE QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W+ L+ Sbjct: 61 NLVDLVRVFKEHQPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYTLLEAARAYWNTLAD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------------LFSEDMPYNPSSPYSATKASS 164 D K FRF ISTDEVYG L LF+E Y PSSPYSA+KASS Sbjct: 121 DAKKAFRFHHISTDEVYGDLPHPDDIEDSIESSPNKKLPLFTETTSYEPSSPYSASKASS 180 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D+LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL Sbjct: 181 DHLVRAWHRTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWL 240 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 YVEDH RALY V+ +G++GE YNIGG+NE++NI++V I +LD L+PKS + E I F+ Sbjct: 241 YVEDHARALYKVVTEGKVGETYNIGGHNEKQNIEVVNTICSILDTLVPKSTPYAEQITFV 300 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRPGHDRRYAID++KI E+ W P+E E+GL KT+ WYL N W Sbjct: 301 ADRPGHDRRYAIDATKIHKELNWLPEETFETGLRKTIEWYLANQNW 346 >gi|157161536|ref|YP_001458854.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|300946363|ref|ZP_07160641.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|157067216|gb|ABV06471.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|300453955|gb|EFK17575.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] Length = 354 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/338 (56%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVMDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+PD +++ AAESHVDRSI G FI TN+IGTF LLE R +WS L Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSGLGD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD RY Sbjct: 241 EGKSGETYNIGGHNERKNIDVVRTICAILDKVVAQKPGNIAHFADLITFVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|297520837|ref|ZP_06939223.1| dTDP-glucose 4,6-dehydratase [Escherichia coli OP50] Length = 327 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/325 (58%), Positives = 238/325 (73%), Gaps = 6/325 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P +++LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVVHYSDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKT 320 ID+SKI E+GW PQE ESG+ KT Sbjct: 303 IDASKIARELGWLPQETFESGMRKT 327 >gi|330954840|gb|EGH55100.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae Cit 7] Length = 360 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+ W P+E ESGL KTV WYL+N W R Sbjct: 301 AIDASKIDKELDWTPEETFESGLRKTVQWYLNNLDWCR 338 >gi|146312297|ref|YP_001177371.1| dTDP-glucose 4,6-dehydratase [Enterobacter sp. 638] gi|145319173|gb|ABP61320.1| dTDP-glucose 4,6-dehydratase [Enterobacter sp. 638] Length = 360 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL RY++N+ V+ +DKLTYAGNL SL EI +S+ ++F+Q DIC Sbjct: 1 MKILVTGGAGFIGSALIRYIINETTDSVINVDKLTYAGNLQSLGEIDKSDRYTFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPD++++ AAESHVDRSI G FI TNI+GT++LLE R +W L Sbjct: 61 DAQTLERIFDTHQPDSVMHLAAESHVDRSISGPAAFIETNIVGTYVLLEAARKYWLGLQA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKENFRFHHISTDEVYGDLPHPDECEDDASLPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TY +PV+++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 181 WHRTYHLPVIVTNCSNNYGPYHFPEKLIPLVILNALQGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G++GE YNIGG NE+KNI++V I +LD + P++ + +LI F+ DRPGH Sbjct: 241 RALYAVVNNGKVGETYNIGGYNEKKNIEVVQTICQILDEIKPQATPYDKLITFVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P+E ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDAGKITRELGWKPEETFESGIKKTVTWYLNNLEW 340 >gi|330966029|gb|EGH66289.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/338 (58%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ K VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTKHDVLNFDKLTYAGNLESLQSIASKTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L Sbjct: 61 DQAKVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNELGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|119475334|ref|ZP_01615687.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2143] gi|119451537|gb|EAW32770.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2143] Length = 365 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/345 (56%), Positives = 251/345 (72%), Gaps = 11/345 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL+SL I S+ +SF + DIC Sbjct: 5 MKILVTGGAGFIGSAVVRHIIENTHDSVINVDKLTYAGNLSSLVSIDTSDRYSFYRADIC 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + +PDA+++ AAESHVDRSI G +FI TN++GTFILLE R +W L Sbjct: 65 NRGALEAIFDAEEPDAVMHLAAESHVDRSIDGPSDFIQTNMVGTFILLEVARTYWQSLGD 124 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L D LF E PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 125 ERKQGFRFHHISTDEVYGDLEGDDDLFLETTPYAPSSPYSASKAGSDHLVRAWCRTYGLP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VLL+NCSNNYGP+HFPEKLIP I ++G + +YGDGQ +RDWLYVEDH RALY V+ Sbjct: 185 VLLTNCSNNYGPFHFPEKLIPHIILNALDGKALPIYGDGQQIRDWLYVEDHARALYKVVT 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTE--------LIRFIEDRPG 289 +G IGE YNIGG+NE+KNID+V I +L+ L P SYS LI +++DRPG Sbjct: 245 EGAIGETYNIGGHNEKKNIDVVKVICKILENLAPDNSYSRASGNTGGFEALITYVKDRPG 304 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 HDRRYAID+ KI+ ++GW P+E E+G+ KTV WYL+N+ WWR + Sbjct: 305 HDRRYAIDAKKIERDLGWVPEETFETGMKKTVQWYLNNHPWWRAV 349 >gi|261379147|ref|ZP_05983720.1| dTDP-glucose 4,6-dehydratase [Neisseria cinerea ATCC 14685] gi|269144372|gb|EEZ70790.1| dTDP-glucose 4,6-dehydratase [Neisseria cinerea ATCC 14685] Length = 360 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/336 (56%), Positives = 249/336 (74%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIANNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELNRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 RETFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYAI Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 309 DAAKIGRELGWKPQETFESGIRKTVQWYLNNKTWWQ 344 >gi|94499405|ref|ZP_01305942.1| dTDP-glucose 4,6-dehydratase [Oceanobacter sp. RED65] gi|94428159|gb|EAT13132.1| dTDP-glucose 4,6-dehydratase [Oceanobacter sp. RED65] Length = 361 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/340 (57%), Positives = 249/340 (73%), Gaps = 11/340 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND V+ +DKLTYAGNL SL EI+ S ++F QVDICD Sbjct: 4 KILVTGGAGFIGSAVVRHILNDTHDSVVNLDKLTYAGNLESLNEIAGSERYAFEQVDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E +PDAI++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L + Sbjct: 64 RPALERVFAEHKPDAIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEVARAYWNGLPEK 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+ FRF ISTDEVYG L+ + LF+E+ Y PSSPYSA+KASSD+LV AW TYG P Sbjct: 124 QKNSFRFHHISTDEVYGDLENPEDLFTEETAYAPSSPYSASKASSDHLVRAWKRTYGFPT 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V+ + Sbjct: 184 IITNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQVRDWLYVEDHARALYKVVTE 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSH--------TELIRFIEDRPGH 290 G+IGE YNIGG+NE++NI++V I LL+ L+P+ +YS LI ++EDRPGH Sbjct: 244 GQIGETYNIGGHNEKQNIEVVQTICELLEELVPENAYSRMGGNPSGFKGLIAYVEDRPGH 303 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D RYAID+SKI+ E+GW P E ESG+ KTV WYL N W Sbjct: 304 DLRYAIDASKIQKELGWTPLETFESGIRKTVEWYLSNKEW 343 >gi|28896996|ref|NP_796601.1| dTDP-glucose 4,6 dehydratase [Vibrio parahaemolyticus RIMD 2210633] gi|260897625|ref|ZP_05906121.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus Peru-466] gi|28805204|dbj|BAC58485.1| dTDP-D-glucose 4,6-dehydratase [Vibrio parahaemolyticus RIMD 2210633] gi|308087483|gb|EFO37178.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus Peru-466] Length = 362 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL R+++ + V+ +D LTYAGNL SL + QS + F QV+IC Sbjct: 1 MKILVTGGAGFIGSALVRHIIKNTSDSVVNVDCLTYAGNLESLGSVIQSERYVFEQVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G FI TN++GT+ +LE TR +WS L Sbjct: 61 DRAELNRVFEAHKPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTMLEATREYWSKLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + K FRF ISTDEVYG L + +F E PY PSSPYSA+KASSD+LV A Sbjct: 121 NAKAAFRFHHISTDEVYGDLPHPDEVSDGKELPMFLETTPYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KNI++V I +LD L+PK +++E I +++DRPGH Sbjct: 241 RALYKVITEGKVGETYNIGGHNEKKNIEVVNTICEILDTLVPKQTAYSEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAIDSSK++ E+ W P+E E+GL KTV WYLDN W + Sbjct: 301 DRRYAIDSSKMQRELNWTPEETFETGLRKTVQWYLDNPTWCK 342 >gi|153839165|ref|ZP_01991832.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AQ3810] gi|149747337|gb|EDM58315.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AQ3810] Length = 362 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL R+++ + V+ +D LTYAGNL SL + QS + F QV+IC Sbjct: 1 MKILVTGGAGFIGSALVRHIIKNTSDSVVNVDCLTYAGNLESLGSVIQSERYVFEQVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G FI TN++GT+ +LE TR +WS L Sbjct: 61 DRAELNRVFETHKPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTMLEATREYWSKLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + K FRF ISTDEVYG L + +F E PY PSSPYSA+KASSD+LV A Sbjct: 121 NAKAAFRFHHISTDEVYGDLPHPDEVSDGKELPMFLETTPYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KNI++V I +LD L+PK +++E I +++DRPGH Sbjct: 241 RALYKVITEGKVGETYNIGGHNEKKNIEVVNTICEILDTLVPKQTAYSEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAIDSSK++ E+ W P+E E+GL KTV WYLDN W + Sbjct: 301 DRRYAIDSSKMQRELNWTPEETFETGLRKTVQWYLDNPTWCK 342 >gi|254506456|ref|ZP_05118598.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus 16] gi|219550630|gb|EED27613.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus 16] Length = 352 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/337 (57%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL E+ S + F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINETQDSVVNLDKLTYAGNLESLHEVESSARYQFECVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNIIGT+ LLE R +W L Sbjct: 61 DRSRLERVFDEHQPDIVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLETARRYWQSLPL 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+LV AW T+G P Sbjct: 121 EKKRGFRFHHISTDEVYGDLVDAESLFTELTPYAPSSPYSASKASSDHLVRAWLRTFGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YGDG+ +RDWLYVEDH RALY+V Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGKQIRDWLYVEDHARALYMVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 KG +GE YNIGG+NE N+++V +I L++ L P +++ELI F+EDRPGHD RY Sbjct: 241 KGEVGETYNIGGHNELTNLEVVHKICELMEELCPDKPKGVGAYSELIAFVEDRPGHDIRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVRWYLSNRVWW 337 >gi|260899556|ref|ZP_05907951.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AQ4037] gi|308108803|gb|EFO46343.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AQ4037] Length = 371 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 247/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL R+++ + V+ +D LTYAGNL SL + QS + F QV+IC Sbjct: 10 MKILVTGGAGFIGSALVRHIIKNTSDSVVNVDCLTYAGNLESLGSVIQSERYVFEQVNIC 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G FI TN++GT+ +LE TR +WS L Sbjct: 70 DRAELNRVFEAHKPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTMLEATREYWSKLDD 129 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + K FRF ISTDEVYG L + +F E PY PSSPYSA+KASSD+LV A Sbjct: 130 NAKAAFRFHHISTDEVYGDLPHPDEVSDGKELPMFLETTPYEPSSPYSASKASSDHLVRA 189 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 190 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 249 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KNI++V I +LD L+PK +++E I +++DRPGH Sbjct: 250 RALYKVITEGKVGETYNIGGHNEKKNIEVVNTICEILDTLVPKQTAYSEQITYVQDRPGH 309 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAIDSSK++ E+ W P+E E+GL KTV WYLDN W + Sbjct: 310 DRRYAIDSSKMQRELNWTPEETFETGLRKTVQWYLDNPTWCK 351 >gi|212550143|gb|ACJ26794.1| dTDP-D-glucose-4,6-dehydratase [Salmonella enterica subsp. diarizonae] Length = 356 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/342 (55%), Positives = 248/342 (72%), Gaps = 10/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL E+S+++ + F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLAEVSENSRYYFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + +PDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L+ Sbjct: 61 DKAAMEHIFAAHKPDAVMHLAAESHVDRSITGPADFIETNIVGTYVLLEAARGYWNELNA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L LF+E+ Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKLAFRFHHISTDEVYGDLPHPDEVQAGSTLPLFTENTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGRGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG +GE YNIGG+NE+KN+D+V I LLD ++PK S+ + + ++ DRPGH Sbjct: 241 RALYTVVTKGVVGETYNIGGHNEKKNLDVVHTICDLLDEIVPKEGSYRDQLTYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAID++KI E+GW PQE ESG+ KT+ WYL+N W R Sbjct: 301 DRRYAIDAAKISDELGWKPQETFESGIRKTIDWYLNNIEWCR 342 >gi|297380786|gb|ADI39336.1| dTDP-D-glucose 4,6-dehydratase [Salmonella enterica] Length = 357 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + +PDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L+ Sbjct: 61 DKAAMEHIFAAHKPDAVMHLAAESHVDRSITGPADFIETNIVGTYVLLEAARGYWNELNA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK FRF ISTDEVYG L LF+E+ Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKLAFRFHHISTDEVYGDLPHPDEVQAGSTLPLFTENTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGRGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG +GE YNIGG+NE+KN+D+V I LLD ++PK S+ + + ++ DRPGH Sbjct: 241 RALYTVVTKGVVGETYNIGGHNEKKNLDVVHTICDLLDEIVPKEGSYRDQLTYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW P E ESG+ KTV WYL+N W Sbjct: 301 DRRYAIDADKISRELGWKPLETFESGIRKTVEWYLNNRAW 340 >gi|66048159|ref|YP_238000.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] gi|63258866|gb|AAY39962.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 360 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTDHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+ KI E+ W P+E ESGL KTV WYLDN W R Sbjct: 301 AIDAGKIDKELDWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|260162545|dbj|BAI43787.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae] Length = 354 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVLDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+PD +++ AAESHVDRSI G FI TN+IGTF LLE R +WS L + Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSGLGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD RY Sbjct: 241 EGKSGETYNIGGHNERKNIDVVRTICAILDKVVAQKPGNITHFADLITFVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI+++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AINAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|312172861|emb|CBX81117.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora ATCC BAA-2158] Length = 383 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ VL IDKLTYAGNL SL+EIS + + F + DIC Sbjct: 26 MKILVTGGAGFIGSAVIRHIINNTDDTVLNIDKLTYAGNLESLQEISDNPRYHFSKTDIC 85 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A +F+PD +++ AAESHVDRSI G FI TNIIGT++LLE R++W L Sbjct: 86 DSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLGLPV 145 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 146 ERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTYGLP 205 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ VRDWLYVEDH RALY V Sbjct: 206 VLVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPIYGNGKQVRDWLYVEDHARALYRVAT 265 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NER+NI++V I +L+ L+ LI F++DRPGHD RY Sbjct: 266 TGVVGETYNIGGHNERQNIEVVNTICSILNRLVVDKPCGIADFATLITFVQDRPGHDLRY 325 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ E+GW P+E E+GL KTV WYL N WW+ Sbjct: 326 AIDATKIEKELGWLPEETFETGLEKTVQWYLKNTEWWQ 363 >gi|59710773|ref|YP_203549.1| dTDP-glucose 4,6-dehydratase [Vibrio fischeri ES114] gi|59478874|gb|AAW84661.1| dTDP-glucose 4,6-dehydratase [Vibrio fischeri ES114] Length = 364 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/337 (56%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINLDKLTYAGNLESLSDVDSDERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ LS Sbjct: 61 DGAELDRVFSEHKPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEATRSYWNTLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKQAFRFHHISTDEVYGDLEGTDDLFTETTSYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALDGKSLPIYGNGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NID+V I LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKANIDVVKTICSLLEELVPNKPEGVAQYLDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYLDN WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLDNKQWW 337 >gi|296531722|ref|ZP_06894551.1| dTDP-glucose 4,6-dehydratase [Roseomonas cervicalis ATCC 49957] gi|296267954|gb|EFH13752.1| dTDP-glucose 4,6-dehydratase [Roseomonas cervicalis ATCC 49957] Length = 360 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/341 (57%), Positives = 252/341 (73%), Gaps = 3/341 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGSAL R LV + +++ VLV+DKLTYAG SL++ F FLQ DI Sbjct: 1 MRILVTGGAGFIGSALVRRLVLEEQVEAVLVVDKLTYAGERRSLRDCEGRPGFGFLQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A EF+PDA+++ AAESHVDRSI GA FI TNI+GTF LLE R +W+ L Sbjct: 61 ADAAAMAQAFAEFRPDAVMHLAAESHVDRSIAGAAPFIHTNIVGTFTLLEAARAYWNALD 120 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K+ FRFL ISTDEV+GSL G F+E PY P SPYSA+KA SD+LV AW TYG+P Sbjct: 121 AEKRAAFRFLHISTDEVFGSLGPTGYFTETTPYAPRSPYSASKAGSDHLVAAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG G+NVRDWL+V+DHVRAL VL+ Sbjct: 181 TLMTNCSNNYGPYHFPEKLIPLTILNALEGKTLPVYGKGENVRDWLFVDDHVRALITVLR 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAID 297 +G++G+ YN+GGN+ER+NI++V I LD L P + L+ F+ DRPGHD RYAID Sbjct: 241 QGKVGQTYNVGGNSERQNIEVVHAICDTLDRLRPDPAGPRRRLVSFVADRPGHDARYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +SK+K E+GW P E+ E+GL KT+ WYL+N WWW+PL + + Sbjct: 301 ASKLKRELGWEPSESFETGLEKTIAWYLENAWWWQPLRERV 341 >gi|237802170|ref|ZP_04590631.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025027|gb|EGI05083.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 360 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/338 (57%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTAHDVLNFDKLTYAGNLESLQPIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L + Sbjct: 61 DQSRVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICTLLDELAPQHPDGVQQYSDLITYVTDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI++SKI +E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AINASKIDNELGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|71734785|ref|YP_272459.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555338|gb|AAZ34549.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 360 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 251/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L + Sbjct: 61 DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRDYWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+KNID+V I LLD L P+ + + LI ++ DRPGHD+RY Sbjct: 241 EGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGIAQYNYLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +++GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|261856085|ref|YP_003263368.1| dTDP-glucose 4,6-dehydratase [Halothiobacillus neapolitanus c2] gi|261836554|gb|ACX96321.1| dTDP-glucose 4,6-dehydratase [Halothiobacillus neapolitanus c2] Length = 355 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/336 (57%), Positives = 248/336 (73%), Gaps = 5/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L+VTGGAGFIGSA+ R+L+ + V+ ID LTYAGNL S+ ++ S + F Q DI + Sbjct: 12 KLMVTGGAGFIGSAVVRHLIENTDHIVVNIDALTYAGNLESIAAVASSPRYHFEQADITN 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + QPD I++ AAESHVDRSI G F+ TNIIGT+ LLE R +WS LS Sbjct: 72 ADAMTALFNKHQPDGILHLAAESHVDRSIDGPSAFMQTNIIGTYTLLEAARAYWSDLSDA 131 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF ISTDEVYGSL + GLF+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 132 RKTAFRFQHISTDEVYGSLGETGLFTEETAYQPNSPYSASKAASDHLVRAWHHTYGLPVI 191 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I IEG + +YG G +RDWLYVEDH RAL LV ++G Sbjct: 192 TTNCSNNYGPYHFPEKLIPLVILNAIEGKPLPVYGKGNQIRDWLYVEDHARALVLVHEQG 251 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAI 296 IGE YNIGG+NE++NI++V I LL+ L P+ ++ +LI F++DRPGHD+RYAI Sbjct: 252 AIGEVYNIGGHNEQRNIEVVQTICDLLEELKPEKPAGVAAYRDLITFVQDRPGHDQRYAI 311 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI+ E+GW P E ESGL KTV WYLDN+ WW+ Sbjct: 312 DASKIQRELGWTPMETFESGLKKTVQWYLDNSSWWQ 347 >gi|294669021|ref|ZP_06734107.1| dTDP-glucose 4,6-dehydratase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309013|gb|EFE50256.1| dTDP-glucose 4,6-dehydratase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 354 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 250/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQNTEDSVINLDKLTYAGNLESLTDVSDDPRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W +S Sbjct: 61 DRTELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMSP 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EKHEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI+++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 301 AINAAKIGRELGWKPQETFESGIRKTVQWYLDNKTWWQ 338 >gi|56476269|ref|YP_157858.1| dTDP-glucose 4,6-dehydratase [Aromatoleum aromaticum EbN1] gi|56312312|emb|CAI06957.1| DTDP-glucose 4,6-dehydratase [Aromatoleum aromaticum EbN1] Length = 338 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/334 (56%), Positives = 245/334 (73%), Gaps = 7/334 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+L + V +DKLTYAGNL SL ++ S+ + F QVDIC+ Sbjct: 4 RILVTGGAGFIGSAVVRHLTDSTTHHVANLDKLTYAGNLESLNSVANSSRYQFYQVDICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + EF+P A+++ AESHVDRSI G EFI TN++GT+ LLE R +W+ L+ D Sbjct: 64 AAALDKVFAEFRPTAVMHLVAESHVDRSIDGPAEFIQTNMVGTYTLLEAARRYWNALADD 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 124 AKAAFRFHHISTDEVYGDLEGTDDLFTESTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIP I + G + +YGDG +RDWLYVEDH RAL V+ + Sbjct: 184 LVTNCSNNYGPYHFPEKLIPHMILNALAGKPLPVYGDGSQIRDWLYVEDHARALVEVVTR 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 G++GE YNIGG+NE++N+++V I LLD ++P ++ S+ ELI F++DRPGHDRRY Sbjct: 244 GKVGETYNIGGHNEKRNLEVVETICDLLDEMVPWVVRGQACSYRELITFVKDRPGHDRRY 303 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 AID+SKI+ E+GW PQE ESG+ KTV WYL+N+ Sbjct: 304 AIDASKIERELGWMPQETFESGIRKTVRWYLENH 337 >gi|302186965|ref|ZP_07263638.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae 642] Length = 360 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARISAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWL+VEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+ KI +GW P E ESGL KTV WYLDN W R Sbjct: 301 AIDAGKIDKALGWTPAETFESGLRKTVQWYLDNLDWCR 338 >gi|238892392|ref|YP_002917126.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae NTUH-K2044] gi|238544708|dbj|BAH61059.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 355 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 239/336 (71%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R ++ +V+V+DKLTYAGNL SL ++Q F+F QVDICDR Sbjct: 4 ILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDICDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R WW+ L+ + Sbjct: 64 AELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSWWNTLATAQ 123 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 124 KSAFRFHHISTDEVYGDLHGSDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALYLV G Sbjct: 184 ITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVATCG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRYAI 296 GE YNIGG+NERKNI++V I LL+ L P+ +H +LI F+ DRPGHD RYAI Sbjct: 244 EPGETYNIGGHNERKNIEVVETICQLLEELAPDKPQGVAHYRDLIAFVADRPGHDLRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+SKI E+GW P E SG+ KTV WYL N WWR Sbjct: 304 DASKIARELGWTPAETFTSGMRKTVAWYLANEAWWR 339 >gi|292488710|ref|YP_003531597.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] gi|291554144|emb|CBA21331.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] Length = 383 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ VL IDKLTYAGNL SL+EIS + + F + DIC Sbjct: 26 MKILVTGGAGFIGSAVIRHIINNTDDTVLNIDKLTYAGNLESLQEISDNPRYHFSKTDIC 85 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A +F+PD +++ AAESHVDRSI G FI TNIIGT++LLE R++W L Sbjct: 86 DSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLGLPV 145 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 146 ERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTYGLP 205 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ VRDWLYVEDH RALY V Sbjct: 206 VLVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPIYGNGRQVRDWLYVEDHARALYRVAT 265 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NER+NI++V I +L+ L+ LI F++DRPGHD RY Sbjct: 266 TGVVGETYNIGGHNERQNIEVVNTICSILNRLVVDKPCGIADFATLITFVQDRPGHDLRY 325 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ E+GW P+E E+GL KTV WYL N WW+ Sbjct: 326 AIDATKIEKELGWLPEETFETGLEKTVQWYLKNTEWWQ 363 >gi|157961225|ref|YP_001501259.1| dTDP-glucose 4,6 dehydratase [Shewanella pealeana ATCC 700345] gi|157846225|gb|ABV86724.1| dTDP-glucose 4,6-dehydratase [Shewanella pealeana ATCC 700345] Length = 365 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/340 (55%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL I + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLSSIESNERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QP+A+++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W+ LS+ Sbjct: 61 DRAELDRVFAQCQPNAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNTLSK 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 GAKQAFRFHHISTDEVYGDLPHPDEVESGKELPLFTETTAYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG+NE++N+++V I +LD L+PK +++ I ++ DRPGH Sbjct: 241 RALYKVVTEGLVGETYNIGGHNEKQNLEVVQTICSILDFLVPKETKYSQQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+GW P E E+GL KT+ WYL N W Sbjct: 301 DRRYAIDSSKMQRELGWTPVETFETGLRKTIEWYLTNKEW 340 >gi|261345263|ref|ZP_05972907.1| dTDP-glucose 4,6-dehydratase [Providencia rustigianii DSM 4541] gi|282566961|gb|EFB72496.1| dTDP-glucose 4,6-dehydratase [Providencia rustigianii DSM 4541] Length = 357 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++ + +V+D LTYAGNL SL E++ + ++F V+ICD Sbjct: 5 RILITGGAGFIGSAVVRHVIENTNDSAVVVDCLTYAGNLESLAEVANNERYAFEHVNICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G EFI TNI+GT+ LLE R +WS L + Sbjct: 65 RAALDRVFAEYQPDVVMHLAAESHVDRSIDGPAEFIETNIVGTYTLLEAARHYWSALDES 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG LD G F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 KKLAFRFHHISTDEVYGDLDGPDGFFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWL+VEDH RAL+LV + Sbjct: 185 MITNCSNNYGPYHFPEKLIPLIILNAISGKPLPVYGKGEQIRDWLFVEDHARALHLVATQ 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 + G YNIGG+NER+NI++V I LL+ L P+ + +LI +++DRPGHD RYA Sbjct: 245 AQPGSTYNIGGHNERRNIEVVETICELLEELYPQKPQGVAHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI+ E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 305 IDAAKIERELGWTPQETFESGIRKTVQWYLNNETWWR 341 >gi|152971030|ref|YP_001336139.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955879|gb|ABR77909.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 354 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVMDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+PD +++ AAESHVDRSI G FI TN+IGTF +LE R +WS L Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTMLEAARHYWSGLGD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 VQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD RY Sbjct: 241 EGKSGETYNIGGHNERKNIDVVRTICAILDKVVAQKPGNITHFADLITFVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|197334246|ref|YP_002154928.1| dTDP-glucose 4,6-dehydratase [Vibrio fischeri MJ11] gi|197315736|gb|ACH65183.1| dTDP-glucose 4,6-dehydratase [Vibrio fischeri MJ11] Length = 364 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ + V+ +DKLTYAGNL SL ++ + F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIISNTQDSVINLDKLTYAGNLESLSDVDSHERYVFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ LS Sbjct: 61 DRAELDRIFSEHKPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEATRSYWNTLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKQAFRFHHISTDEVYGDLEGTDDLFTETTSYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGNGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NID+V I LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKANIDVVKTICSLLEELVPNKPEGVAQYLDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYLDN WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLDNKQWW 337 >gi|330446540|ref|ZP_08310192.1| dTDP-glucose 4,6-dehydratase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490731|dbj|GAA04689.1| dTDP-glucose 4,6-dehydratase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 360 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + +V+ IDKLTYAGNL SL+EI S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTQDEVVNIDKLTYAGNLESLQEIEGSQRYKFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++++PDA+++ AAESHVDRSI G FI TNIIGT+ +LE R +W+ L Sbjct: 61 DRAELDRVFEQYKPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTMLEAARQYWNRLEV 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 SRKSAFRFHHISTDEVYGDLEGTDDLFTETTSYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G ++ +YGDG +RDWLYVEDH ALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALDGKNLPVYGDGMQIRDWLYVEDHASALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRY 294 KG +GE YNIGG+NE+ NI++V I LL+ L+P + E LI ++ DRPGHD RY Sbjct: 241 KGEVGETYNIGGHNEKANIEVVKTICSLLEELVPNKPDNVEKYQDLITYVSDRPGHDIRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P E ESG+ K+V WYL+N WW Sbjct: 301 AIDASKIERELGWKPAETFESGIRKSVEWYLNNKTWW 337 >gi|104779537|ref|YP_606035.1| dTDP-D-glucose-4,6-dehydratase [Pseudomonas entomophila L48] gi|95108524|emb|CAK13218.1| dTDP-D-glucose-4,6-dehydratase [Pseudomonas entomophila L48] Length = 361 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 249/339 (73%), Gaps = 7/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+++ + +VL +DKLTYAGNL SL+ I+ ++ + F+Q DI Sbjct: 1 MRILVTGGAGFIGSALVRHLIDNTEHEVLNLDKLTYAGNLESLQGIASNSRYEFVQADIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ FQP AI++ AAESHVDRSI G FI TNI+GT+ LLE TR WWS L Sbjct: 61 DQPTVSALLERFQPQAIMHLAAESHVDRSIDGPAAFIQTNIVGTYALLEATRAWWSRLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 DARTAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ VRDWLYVEDH RAL V+ Sbjct: 181 VLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-----HTELIRFIEDRPGHDRR 293 G++GE YNIGG+NE+KN+D+V + LL+ L P+ + +LI F++DRPGHD R Sbjct: 241 TGKVGETYNIGGHNEQKNLDVVHTLCDLLEELAPECRPAGVARYKDLITFVQDRPGHDLR 300 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAID+SKI+ E+GW P E +GL KTV WYL N W + Sbjct: 301 YAIDASKIEHELGWKPDETFFTGLRKTVQWYLANLDWCK 339 >gi|213970796|ref|ZP_03398920.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1] gi|301383030|ref|ZP_07231448.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato Max13] gi|302063435|ref|ZP_07254976.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato K40] gi|302130651|ref|ZP_07256641.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924468|gb|EEB58039.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1] Length = 360 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHNVLNFDKLTYAGNLESLQSIASNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L Sbjct: 61 DQAKVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNELGWTPEETFESGLRKTVQWYLDNLEWCR 338 >gi|217972651|ref|YP_002357402.1| dTDP-glucose 4,6 dehydratase [Shewanella baltica OS223] gi|217497786|gb|ACK45979.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS223] Length = 356 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + +V+ +DKLTYAGNL SL + ++ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDRVINVDKLTYAGNLESLVSVDKNERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI G +FI TNIIGT+ LLE TR +W+ LS Sbjct: 61 DRAELDRVFAQHQPDAVMHLAAESHVDRSITGPSDFIQTNIIGTYTLLEATRAYWNELSA 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EAKKAFRFHHISTDEVYGDLPHPDEVALDTELPLFTETTSYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G+ +RDWLYVEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKLLPIYGKGEQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+IG+ YNIGG+NE++N+++V I +LDAL+PK + + I ++ DRPGH Sbjct: 241 RALYKVVTEGKIGDTYNIGGHNEKQNLEVVKTICSILDALVPKDTPYADQIIYVSDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI +E+ W P+E E+GL KTV WYL N W Sbjct: 301 DRRYAIDAVKISNELNWQPEETFETGLRKTVEWYLTNQEW 340 >gi|294635547|ref|ZP_06714027.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] gi|291091116|gb|EFE23677.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] Length = 362 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/341 (56%), Positives = 244/341 (71%), Gaps = 11/341 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ +V+ +DKLTYAGNL SL E+++++ + F DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIKQTDDEVVNVDKLTYAGNLESLAEVAENSRYCFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + E QPDAI++ AAESHVDRSI G FI TNI+GT++LLE R +WS LS Sbjct: 61 DKAAMVRIFSEHQPDAIMHLAAESHVDRSISGPAAFIETNIVGTYVLLEACRQYWSSLSA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKAAFRFHHISTDEVYGDLPHPDEMASETVLPLFTEQTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WMRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPG 289 RALY V+ +G+ GE YNIGG+NE++N+D+V I LLD ++P K S+ + I ++ DRPG Sbjct: 241 RALYTVVTQGKAGETYNIGGHNEKQNLDVVHTICDLLDEIVPKKGGSYRDQITYVADRPG 300 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 HDRRYAID+ KI E+GW P E ESG+ KTV WYLDN W Sbjct: 301 HDRRYAIDAQKISVELGWKPAETFESGIRKTVQWYLDNLQW 341 >gi|56459650|ref|YP_154931.1| dTDP-D-glucose 4,6-dehydratase [Idiomarina loihiensis L2TR] gi|56178660|gb|AAV81382.1| DTDP-D-glucose 4,6-dehydratase [Idiomarina loihiensis L2TR] Length = 352 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 252/339 (74%), Gaps = 5/339 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+L+ + V+ IDKLTYAGN+ SL +S S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHLIKNTSHIVINIDKLTYAGNVESLLPVSDSENYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ E +PDA+++ AAESHVDRSI G EFI TNI+GT+ LLE TR +WS LS+ Sbjct: 61 NAPEVKRVYIEHKPDAVMHLAAESHVDRSIEGPSEFIQTNIVGTYTLLEATRSYWSNLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EMKSTFRFHHISTDEVYGDLGDPTELFTETTAYAPSSPYSASKASSDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIP I + G + +YGDG+ +RDWLYVEDH RAL V+ Sbjct: 181 VIITNCSNNYGPYHFPEKLIPHIILNALSGKELPVYGDGKQIRDWLYVEDHARALVKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAI 296 +G++GE YN+GG+NE++NI++V I LLD L P + + E I F++DRPGHD+RYAI Sbjct: 241 EGKVGETYNVGGHNEKQNIEVVNTICELLDELKPSASGKPYKEQITFVKDRPGHDKRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPL 334 D+SKI+ E+GW P+E+ E+GL KTV WYL+N NWW R L Sbjct: 301 DASKIEDELGWTPEESFETGLRKTVEWYLNNKNWWQRVL 339 >gi|223041543|ref|ZP_03611744.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor 202] gi|223017638|gb|EEF16048.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor 202] Length = 351 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/348 (55%), Positives = 257/348 (73%), Gaps = 10/348 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L+VTGGAGFIGSAL RY++++ + V+ +DKLTYAGNL SL+ + + ++F QVDICD Sbjct: 3 KLLVTGGAGFIGSALIRYIISNTQDSVINVDKLTYAGNLESLEAVENNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++QPDA+++ AAESHVDRSI A FI TNI+GT+ LLE R +W+ LS++ Sbjct: 63 KVALERVFNQYQPDAVMHLAAESHVDRSIDNAATFIETNIVGTYTLLEVARGYWNGLSEE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF+ ISTDEVYG L+ + F ED PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 RKSTFRFVHISTDEVYGDLEESQSPFREDSPYLPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G+ +RDW++VEDHVRALY +L K Sbjct: 183 IVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPIYGNGKQIRDWIFVEDHVRALYQILSK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G IG Y+IGG NE+ NID+V +I LL+ L P + +LI ++ DRPGHD RYA Sbjct: 243 GSIGSSYSIGGTNEKANIDVVRDICSLLEDLAPNKPIGVARYEDLIVYVADRPGHDNRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELK 339 +D+SKI+ E+GW P E E+GL KTV WYLD+ WW+ + YK++K Sbjct: 303 LDTSKIRKELGWKPLETFETGLRKTVEWYLDHKTWWQNIIDGSYKKIK 350 >gi|332142154|ref|YP_004427892.1| dTDP-glucose 4,6 dehydratase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552176|gb|AEA98894.1| dTDP-glucose 4,6 dehydratase [Alteromonas macleodii str. 'Deep ecotype'] Length = 360 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/342 (56%), Positives = 243/342 (71%), Gaps = 10/342 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+L+ND V+ +DKLTYAGNL SL +S S+ +SF QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRHLINDTDHTVVNLDKLTYAGNLESLTPVSSSDRYSFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ +PD I++ AAESHVDRSI G EFI TN++GT+ LLE+ R +WS L DK Sbjct: 65 EKVKRVFNTHRPDIIMHLAAESHVDRSIDGPGEFIQTNVVGTYTLLEQARAYWSELEGDK 124 Query: 123 KDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K F+F ISTDEVYG L + LF+E PY PSSPYSA+KASSD LV +W Sbjct: 125 KAGFKFHHISTDEVYGDLPHPDEVEPGTELPLFTETTPYAPSSPYSASKASSDQLVRSWL 184 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +P L++NCSNNYGPYHFPEKLIPL I + G + +YG G +RDWLYVEDH RA Sbjct: 185 RTYKLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGKGNQIRDWLYVEDHARA 244 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L +V G IGE YNIGG+NE++NI++V I +LD + PK + E I +++DRPGHD Sbjct: 245 LVVVALNGEIGETYNIGGHNEKQNIEVVQTICTILDEVKPKESKYAEQITYVQDRPGHDM 304 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RYAID+SKI+ E+GW PQE ESG+ KTV WYL N WW+ + Sbjct: 305 RYAIDASKIERELGWKPQETFESGIRKTVEWYLANEGWWKAV 346 >gi|29725994|gb|AAO88925.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 KRKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|254492644|ref|ZP_05105815.1| dTDP-glucose 4,6-dehydratase [Methylophaga thiooxidans DMS010] gi|224462165|gb|EEF78443.1| dTDP-glucose 4,6-dehydratase [Methylophaga thiooxydans DMS010] Length = 355 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/331 (57%), Positives = 240/331 (72%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 LI+TGGAGFIGSAL R L+ Q++ +DKLTYAGNL SLK I + F+Q DICD Sbjct: 6 LIITGGAGFIGSALIRRLITQSNYQIINVDKLTYAGNLESLKSIESHPNYIFVQADICDA 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +QP A+++ AAESHVDRSI G +F+ TN++GT+ +LE R +W+ L ++ Sbjct: 66 GKMAEVFSFYQPSAVMHLAAESHVDRSIDGPADFVQTNLVGTYTILEAARAYWNKLPSER 125 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D FRF ISTDEV+GSL + GLF E PY P+SPYSATKA SD+LV AW HTYG+PVL+ Sbjct: 126 ADNFRFHHISTDEVFGSLGEHGLFEETTPYQPNSPYSATKAGSDHLVRAWQHTYGLPVLM 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGP+ FPEKLIPL I + G + +YG G N+RDWLYVEDHV AL LVL+KG Sbjct: 186 SNCSNNYGPFQFPEKLIPLMINNAVSGKALPIYGRGDNIRDWLYVEDHVEALQLVLEKGT 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 +GE YNIGG NE NID+V + +LD LIP S H +LI F+ DRPGHD+RYAID++ Sbjct: 246 VGESYNIGGFNEHTNIDVVETLCGILDELIPDSDFVPHKKLIEFVTDRPGHDQRYAIDAT 305 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P+E +GL KTV WYL+N+ W Sbjct: 306 KIQQELGWRPRETFATGLQKTVQWYLENHEW 336 >gi|260162571|dbj|BAI43812.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae] Length = 354 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/338 (56%), Positives = 246/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTLDEVRVVDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + EF+PD +++ AAESHVDRSI G FI TN+IGTF LLE R +WS L + Sbjct: 61 DAAAVAVQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSGLGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD RY Sbjct: 241 EGKSGETYNIGGHNERKNIDVVRTICAILDKVVAQKPGNITHFADLITFVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|292899866|ref|YP_003539235.1| dTDP-D-glucose-4,6-dehydratase [Erwinia amylovora ATCC 49946] gi|291199714|emb|CBJ46834.1| dTDP-D-glucose-4,6-dehydratase [Erwinia amylovora ATCC 49946] Length = 358 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ VL IDKLTYAGNL SL+EIS + + F + DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTDDTVLNIDKLTYAGNLESLQEISDNPRYHFSKTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A +F+PD +++ AAESHVDRSI G FI TNIIGT++LLE R++W L Sbjct: 61 DSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLGLPV 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ VRDWLYVEDH RALY V Sbjct: 181 VLVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPIYGNGRQVRDWLYVEDHARALYRVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NER+NI++V I +L+ L+ LI F++DRPGHD RY Sbjct: 241 TGVVGETYNIGGHNERQNIEVVNTICSILNRLVVDKPCGIADFATLITFVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ E+GW P+E E+GL KTV WYL N WW+ Sbjct: 301 AIDATKIEKELGWLPEETFETGLEKTVQWYLKNTEWWQ 338 >gi|284006580|emb|CBA71841.1| dTDP-D-glucose-4,6-dehydratase [Arsenophonus nasoniae] Length = 355 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ VLV+D LTYAGNL SL + + ++F Q++I D Sbjct: 3 RILVTGGAGFIGSAVVRHIIEHTNDNVLVVDSLTYAGNLESLASVVDNPRYTFTQINIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Q Sbjct: 63 RPAMDKIFAQYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYHLLEAARNYWNHLDQQ 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L +GLF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKPLFRFHHISTDEVYGDLHTTEGLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWLYVEDH RAL+LV+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLIILNAIAGKSLPVYGQGEQIRDWLYVEDHARALHLVISQ 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSH-TELIRFIEDRPGHDRRYA 295 G+ YNIGG+NERKNID+V I LL+ L P +H +LI ++ DRPGHD RYA Sbjct: 243 ADAGKTYNIGGHNERKNIDVVKTICDLLEELRPVKPNGVTHYRDLITYVTDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI+ E+GW PQE ESG+ KTV WYL N WWR Sbjct: 303 IDASKIEQELGWKPQETFESGMRKTVEWYLSNETWWR 339 >gi|32034492|ref|ZP_00134664.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208936|ref|YP_001054161.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae L20] gi|307257541|ref|ZP_07539305.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126097728|gb|ABN74556.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306863977|gb|EFM95896.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 357 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 198/338 (58%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TGGAGFIGSAL RY++ + IDKLTYAGNL SL +S S+ + F QVDICD Sbjct: 4 IFITGGAGFIGSALIRYVIKHTDCIAVNIDKLTYAGNLASLASVSNSSRYYFEQVDICDS 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I ++QPDA+++ AAESHVDRSI G F+ TNIIGT+ LLE +R +W LS++K Sbjct: 64 GRISQLFCKYQPDAVMHLAAESHVDRSIDGPAAFMQTNIIGTYTLLEASRRYWLDLSREK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L DKGLF+E PY PSSPYSA+KASSD+LV AW TYG+P L Sbjct: 124 KQDFRFHHISTDEVYGDLGHDKGLFTETSPYAPSSPYSASKASSDHLVRAWFRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPY FPEKLIPL I +EG + +YG+G +RDWL+VEDHVRALY VL G Sbjct: 184 VTNCSNNYGPYQFPEKLIPLMILNALEGKSLPVYGNGLQIRDWLFVEDHVRALYKVLCDG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 ++GE YNIGG+NE+ NI++V I +LD L+P + + ELI +++DRPGHD RYAI Sbjct: 244 KVGETYNIGGHNEKTNIEVVRAICRILDELVPNKRNGINKYEELITYVKDRPGHDVRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI +++GW PQE ESGL KTV WYL N WW+ + Sbjct: 304 DASKICTDLGWQPQETFESGLRKTVEWYLSNKDWWQSI 341 >gi|148556920|ref|YP_001264502.1| dTDP-glucose 4,6-dehydratase [Sphingomonas wittichii RW1] gi|148502110|gb|ABQ70364.1| dTDP-glucose 4,6-dehydratase [Sphingomonas wittichii RW1] Length = 352 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/334 (57%), Positives = 244/334 (73%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+ + +VL +DKLTYAG L+SL + S + F++ DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLIGETDHEVLNLDKLTYAGVLSSLDPVGDSPRYRFVRGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + L EF+PD I + AAESHVDRSI G FI TN++GT+ LL E +W L Sbjct: 61 DGELVGRLLGEFRPDVIAHLAAESHVDRSIDGPGAFIQTNLVGTYTLLAEALAYWRGLDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D++D FRF ISTDEV+GSL + G F+E Y+P SPYSA+KA SD+LV AWGHTYG+PV Sbjct: 121 DRRDAFRFHHISTDEVFGSLGEDGYFTEATAYDPRSPYSASKAGSDHLVRAWGHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I R + G + +YGDG NVRDWL+VEDH RAL V ++ Sbjct: 181 LVTNCSNNYGPYHFPEKLIPLIIIRALAGEPLPVYGDGSNVRDWLFVEDHARALRAVFER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G GE YN+GG++ER+N+++V I LD L P++ ++ I F+ DRPGHD RYAID Sbjct: 241 GVPGETYNVGGDSERRNLEVVQAICATLDRLAPRADGRAYAGQIGFVADRPGHDHRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +SKIK+E+GW PQ E G+ +TV WYLDN WW Sbjct: 301 ASKIKAELGWAPQVGFEEGIERTVRWYLDNRGWW 334 >gi|330900905|gb|EGH32324.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 360 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAES VDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 61 DQARVSAVLERFAPQAIMHLAAESPVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICALLDELAPQHPAGVAQYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+ W P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDKELDWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|331018759|gb|EGH98815.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 360 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 249/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHDVLNFDKLTYAGNLESLQSIASNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L Sbjct: 61 DQAKVSAVLERFTPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNELGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|163803296|ref|ZP_02197175.1| dTDP-D-glucose 4,6-dehydratase [Vibrio sp. AND4] gi|159172933|gb|EDP57771.1| dTDP-D-glucose 4,6-dehydratase [Vibrio sp. AND4] Length = 362 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL E+ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIKNTSDSVINVDKLTYAGNLESLVEVDSSERYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L Sbjct: 61 NRSELDRVFADHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYTLLEATREYWNTLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGL--FSEDMPYNPSSPYSATKASSDYLVLA 170 K +FRF ISTDEVYG L D L F E Y PSSPYSA+KASSD+LV A Sbjct: 121 SAKVEFRFHHISTDEVYGDLPHPDEVKSDTALPMFLETTSYEPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE+KN+++V I +LD L+PK + E I +++DRPGH Sbjct: 241 RALYKVVTEGQVGETYNIGGHNEKKNLEVVNTICDILDTLVPKDTKYAEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+ W P+E E+GL KTV WYLDN+ W Sbjct: 301 DRRYAIDSSKMQRELNWTPEETFETGLKKTVQWYLDNSTW 340 >gi|254286306|ref|ZP_04961265.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae AM-19226] gi|150423721|gb|EDN15663.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae AM-19226] Length = 354 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRVELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|254295499|ref|YP_003061521.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] gi|254044030|gb|ACT60824.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] Length = 347 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/336 (57%), Positives = 244/336 (72%), Gaps = 3/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+CR+L+ D + V+ +DKLTYA NL SLKEI + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVCRHLIKDKGVSVVNLDKLTYAANLESLKEIQDNPNYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + LK+ DAI++ AAESHVDRSI G F+ TNIIGT+ +LE R +W + Sbjct: 61 DREAVLAVLKKHSVDAIMHLAAESHVDRSIDGPSAFMETNIIGTYSMLEAARHYWKD-TL 119 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D+FRF ISTDEV+G L D LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 120 NSSDKFRFHHISTDEVFGDLPFDDSLFTETTPYAPSSPYSASKASSDHLVRAWERTYGLP 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL +EG + +YG G NVRDWLYVEDH AL VL+ Sbjct: 180 VVMTNCSNNYGPFHFPEKLIPLVTLNALEGKTLPVYGKGDNVRDWLYVEDHAVALATVLE 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG++GE YNIGGN ER N+ +V I +LD ELI F+ DRPGHD RYAID+ Sbjct: 240 KGKLGESYNIGGNCERTNLGVVESICDILDERGRIDKPRRELIEFVTDRPGHDMRYAIDA 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKIK+++GW P E GL KT+ WYL N WWW+P+ Sbjct: 300 SKIKNDLGWEPSVTFEEGLTKTIDWYLANEWWWKPI 335 >gi|309274609|gb|ADO64233.1| RmlB [Vibrio vulnificus] Length = 353 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL ++ S+ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINDTQDSVVNLDKLTYAGNLESLASVAYSDRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Sbjct: 61 DRAGLERVFAVHQPDAVMHLAAESHVDRSIDGPSAFIETNIVGTYTLLEAARSYWNSLPC 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TVVTNCSNNYGPYHFPEKLIPLIILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ ++P + LI +++DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKANIEVVKTICSLLEEMVPNKPQGVVQYQNLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW PQE ESG+ KTV WYL+N WW Sbjct: 301 AIDASKIERELGWKPQETFESGIRKTVEWYLNNQEWW 337 >gi|70733811|ref|YP_257451.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf-5] gi|68348110|gb|AAY95716.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf-5] Length = 360 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/338 (57%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+ + +VL +DKLTYAGNL SL I+ ++ + F++ DI Sbjct: 1 MRILVTGGAGFIGSALVRHLLQHTEHEVLNLDKLTYAGNLESLHSIASNSRYEFVKADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L FQP AI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W L + Sbjct: 61 DQATVSAVLARFQPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWHALPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AEKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL+ V+ Sbjct: 181 VLITNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALFKVMT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LL+ L P+ + +LI F++DRPGHD RY Sbjct: 241 EGAVGETYNIGGHNEQKNIDVVRGICSLLEELAPQKPQGVAHYADLITFVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+ KI+ E+GW P+E SGL KTV WYL+N W R Sbjct: 301 AIDAGKIERELGWVPEETFTSGLRKTVQWYLENLEWCR 338 >gi|259908059|ref|YP_002648415.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|224963681|emb|CAX55178.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|283477957|emb|CAY73873.1| dTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae DSM 12163] Length = 356 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/338 (57%), Positives = 250/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ VL +DKLTYAGNL SL+ IS S+ + F + DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTDDVVLNVDKLTYAGNLESLQGISDSSRYHFSKTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + A +F+PD +++ AAESHVDRSI G FI TNIIGT++LLE R +W L Sbjct: 61 DPESLNHAFNDFEPDVVMHLAAESHVDRSINGPAAFIETNIIGTYVLLEAARRYWLGLPV 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G L LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKEAFRFHHISTDEVFGDLHGTDDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I + G + +YGDG+ VRDWLYVEDH RALY V Sbjct: 181 ALITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGDGKQVRDWLYVEDHARALYRVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYS-HTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NER+NID+V I +L+ L+ P+ + ++ LI F++DRPGHD RY Sbjct: 241 AGIVGETYNIGGHNERQNIDVVNTICRVLNRLVVDKPRGITDYSVLITFVQDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ E+GW P+E E+GL KTV WYL+N WW+ Sbjct: 301 AIDATKIEKELGWLPEETFETGLEKTVRWYLENTEWWK 338 >gi|312882941|ref|ZP_07742673.1| dTDP-glucose 4,6 dehydratase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369460|gb|EFP96980.1| dTDP-glucose 4,6 dehydratase [Vibrio caribbenthicus ATCC BAA-2122] Length = 357 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ V+ +D LTYAGNL SL + + + F QV+IC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIESTNDSVVNVDCLTYAGNLESLASVENNERYVFEQVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E+ PDA+++ AAESHVDRSI G FI TN++GT+ LLE TR +W+ LS Sbjct: 61 DRAELDRVFSEYNPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTLLEATRAYWNDLSL 120 Query: 121 DKKDQFRFLQISTDEVYGSL------DKG----LFSEDMPYNPSSPYSATKASSDYLVLA 170 D K FRF ISTDEVYG L D G +F E PY PSSPYSA+KASSD+LV A Sbjct: 121 DAKQSFRFHHISTDEVYGDLPHPDEFDAGTELPMFLETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G IGE YNIGG+NE++N+++V I +LD L+PK + E I +++DRPGH Sbjct: 241 RALYKVVTEGGIGETYNIGGHNEKRNLEVVETICSILDVLVPKDSPYAEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+GW P E E+GL KTV WYLDN+ W Sbjct: 301 DRRYAIDSSKMQQELGWTPIETFETGLKKTVQWYLDNHKW 340 >gi|153829576|ref|ZP_01982243.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 623-39] gi|148874972|gb|EDL73107.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 623-39] Length = 354 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRVELDRVFAEHQPDAVMHLAAESHVDRSIDGPTAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SK++ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKVERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|153826348|ref|ZP_01979015.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae MZO-2] gi|149739917|gb|EDM54104.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae MZO-2] Length = 354 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRVELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|83582780|ref|YP_425086.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] gi|83578096|gb|ABC24646.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] Length = 351 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/339 (55%), Positives = 243/339 (71%), Gaps = 1/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ +L++ V+ +D LTYA NL SL E++ S+ + F + DI Sbjct: 1 MKILVTGGAGFIGSAVVHHLMSATDASVVNVDALTYAANLASLAEVAGSSRYQFEKADIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TN++GT+ LLE R +WS LS Sbjct: 61 DAAALDRLFATHQPDAVMHLAAESHVDRSIDGPAAFIETNLLGTYTLLEAARRYWSALSA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++K FRF ISTDEVYGSL + G F+E PY+P+SPYSA+KA SD+LV AW HTYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGSLGEIGAFTEATPYSPNSPYSASKAGSDHLVNAWHHTYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP FPEKLIPL I +EG + +YG GQN+RDWL+VEDH RAL+ VL K Sbjct: 181 VISNCSNNYGPRQFPEKLIPLMILNGLEGKPLPVYGQGQNIRDWLHVEDHARALWAVLTK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YN+GG ER+NIDIV + LLD L+P LI +++DRPGHD RYAID+S Sbjct: 241 GQPGESYNVGGAAERRNIDIVTTVCDLLDELVPAEKPRRALITYVQDRPGHDFRYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +I E+GW P E E+G+ KT+ WYLDN WWRPL ++ Sbjct: 301 RIHGELGWQPVETFETGIRKTIQWYLDNEAWWRPLRDQV 339 >gi|119469060|ref|ZP_01612044.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Alteromonadales bacterium TW-7] gi|119447312|gb|EAW28580.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Alteromonadales bacterium TW-7] Length = 362 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/338 (55%), Positives = 248/338 (73%), Gaps = 8/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ + V+ +DKLTYAGNL SLK + ++ + F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIDNTQDLVVNLDKLTYAGNLESLKSVDSNDRYKFERVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ I + +PDA+++ AAESHVDRSI G EFI TNI+GT+ LLE R +W+ L++ Sbjct: 61 DRKAIDRVFAQHKPDAVMHLAAESHVDRSITGPAEFIQTNIVGTYNLLEAAREYWNTLNE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K FRF ISTDEVYG L + LF+E+ Y PSSPYSA+KASSD+LV AW Sbjct: 121 GDKKSFRFHHISTDEVYGDLPHPDEREGELPLFTEETSYAPSSPYSASKASSDHLVRAWL 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RA Sbjct: 181 RTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLYVEDHARA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY V+ +G +GE YNIGG+NE++NI++V I +LD L+PK ++E I F+ DRPGHDR Sbjct: 241 LYKVVTEGIVGETYNIGGHNEKQNIEVVKSICSILDILVPKDSLYSEQITFVADRPGHDR 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAIDSSK+ +++ W P E E+GL KTV WYLDN W Sbjct: 301 RYAIDSSKMSAKLNWTPVETFETGLRKTVQWYLDNQTW 338 >gi|119947067|ref|YP_944747.1| dTDP-glucose 4,6-dehydratase [Psychromonas ingrahamii 37] gi|119865671|gb|ABM05148.1| dTDP-glucose 4,6-dehydratase [Psychromonas ingrahamii 37] Length = 360 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R ++++ K V+ +DKLTYAGNL SL EI S +SF QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRNIISNTKDSVINVDKLTYAGNLESLSEIEASERYSFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + K+ QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE +R +W+ L Sbjct: 61 NRTELDGVFKKHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEASRQYWNQLKA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K+ FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 SRKEAFRFHHISTDEVYGDLEGTDDLFTETTSYEPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+HFPEKLIPL I ++G + +YG+G +RDWLYVEDH ALY V+ Sbjct: 181 TLITNCSNNYGPFHFPEKLIPLIILNALDGKPLPVYGNGMQIRDWLYVEDHASALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTE-LIRFIEDRPGHDRRY 294 KG IGE YNIGG+NE+ NI++V I LL+ L+ P + + E LI ++ DRPGHD RY Sbjct: 241 KGEIGETYNIGGHNEKANIEVVTTICSLLEELVANKPANVTKYEDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P E ESGL KTV WYL+N WW Sbjct: 301 AIDASKIERELGWAPAETFESGLRKTVEWYLNNKKWW 337 >gi|115279741|gb|ABI85357.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPTAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 GRKAAFRFHHISTDEVYGDLEGTDDLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|325138754|gb|EGC61306.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ES14902] Length = 355 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL+ +S ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLEPVSHHPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W + + Sbjct: 63 RAALDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWHDMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKAAFRFHHISTDEVYGDLSGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|29725989|gb|AAO88921.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPTAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|3033515|gb|AAC12869.1| dTDP-D-glucose-4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 357 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/339 (55%), Positives = 246/339 (72%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+V+DKLTYAGNL+SL ++ S+ F+F QVDICD Sbjct: 5 RILITGGAGFIGSALVRYILAETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 65 RAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADA 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEV+G L LF+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 125 DKNAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 185 VITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LL+ L P + + +LI +++DRPGHD RYA Sbjct: 245 GEVGETYNIGGHNERKNIEVVQTICALLEELAPNKPAGVAHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 305 IDAGKIERELGWRPEETFETGMKKTVSWYLNNEKWWRSV 343 >gi|50123126|ref|YP_052293.1| dTDP-glucose 4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] gi|49613652|emb|CAG77103.1| dTDP-glucose 4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 355 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/339 (55%), Positives = 246/339 (72%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+V+DKLTYAGNL+SL ++ S+ F+F QVDICD Sbjct: 3 RILITGGAGFIGSALVRYILAETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 63 RAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF ISTDEV+G L LF+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 123 DKNAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 VITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LL+ L P + + +LI +++DRPGHD RYA Sbjct: 243 GEVGETYNIGGHNERKNIEVVQTICALLEELAPNKPAGVAHYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 303 IDAGKIERELGWRPEETFETGMKKTVSWYLNNEKWWRSV 341 >gi|29726022|gb|AAO88948.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 353 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/336 (56%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIQSTQDSVVNLDKLTYAGNLESLASVTGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSQLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + +T+LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGIAHYTDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKI+ E+GW PQE ESG+ KTV WYL++ W Sbjct: 301 AIDASKIERELGWKPQETFESGIRKTVEWYLNHRVW 336 >gi|95929371|ref|ZP_01312114.1| dTDP-glucose 4,6-dehydratase [Desulfuromonas acetoxidans DSM 684] gi|95134487|gb|EAT16143.1| dTDP-glucose 4,6-dehydratase [Desulfuromonas acetoxidans DSM 684] Length = 358 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/340 (55%), Positives = 246/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGSA+ R++++ ++ +DKLTYAGNL SL+E+ + + F QVDIC Sbjct: 1 MKLLITGGAGFIGSAVIRHIIHSTHDHIVNVDKLTYAGNLESLREVDGNERYQFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE +R +W+ L Sbjct: 61 DRKELDRVFHQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEASRAYWNKLDP 120 Query: 121 DKKDQFRFLQISTDEVYGSL---------DKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + K FRF ISTDEVYG L +K LF+E Y PSSPYSA+KASSD+LV AW Sbjct: 121 EHKKNFRFHHISTDEVYGDLPHPSQDPEAEKHLFTEKASYAPSSPYSASKASSDHLVRAW 180 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 TYG+P L++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH R Sbjct: 181 LRTYGLPTLVTNCSNNYGPYHFPEKLIPLMILNALEGKSLPVYGQGDQIRDWLYVEDHAR 240 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGH 290 ALY ++ +G+IGE YNIGG+NE++NI++V I LLD L P +S + LI ++DRPGH Sbjct: 241 ALYKIITQGKIGETYNIGGHNEQQNIEVVTLICDLLDELAPSKHSPYRSLITHVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+RYAID+ KI+ E+GW PQE SG+ KT+ WYLDN W Sbjct: 301 DKRYAIDAGKIERELGWKPQETFASGIRKTIQWYLDNQAW 340 >gi|29726010|gb|AAO88938.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E+QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRIFAEYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSNLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEK IPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKPIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|227325828|ref|ZP_03829852.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 357 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/339 (55%), Positives = 245/339 (72%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+V+DKLTYAGNL+SL ++ S+ F+F QVDICD Sbjct: 5 RILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 65 RAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADA 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G L LF+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 125 DKRAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 185 VITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NERKNI++V I LL+ L P + + +LI +++DRPGHD RYA Sbjct: 245 GEIGETYNIGGHNERKNIEVVQTICALLEELAPNKPAGVAHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 305 IDAGKIERELGWRPEETFETGMRKTVSWYLNNEKWWRSV 343 >gi|261210466|ref|ZP_05924760.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. RC341] gi|260840524|gb|EEX67090.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. RC341] Length = 354 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|182680402|ref|YP_001834548.1| dTDP-glucose 4,6-dehydratase [Beijerinckia indica subsp. indica ATCC 9039] gi|182636285|gb|ACB97059.1| dTDP-glucose 4,6-dehydratase [Beijerinckia indica subsp. indica ATCC 9039] Length = 363 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 188/334 (56%), Positives = 242/334 (72%), Gaps = 3/334 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGSA+ R+L+ D +V V+DKLTYAGNL++L+ ++++ + F QVDICD Sbjct: 4 RFLVTGGAGFIGSAVVRHLIEDTPHEVCVLDKLTYAGNLDNLEPVAKNPRYRFKQVDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + + +QP I++ AAESHVDRSI G FI TN++GTF LLE R +W L + Sbjct: 64 RAAVATLIASYQPRIIMHLAAESHVDRSIDGPAAFIETNLVGTFTLLEAARCFWQDLPGE 123 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF +STDEV+GSL G F E Y P+SPYSA+KA SD+LV AWGHTYG+P + Sbjct: 124 EKAAFRFHHVSTDEVFGSLGADGFFQETTAYQPNSPYSASKAGSDHLVRAWGHTYGLPTV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNCSNNYGPYHFPEKLIPL I +EG + +YG+GQN+RDWLYVEDH RAL + G Sbjct: 184 TSNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGNGQNIRDWLYVEDHARALVAIALAG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 R GE YN+GG NER NID+V + L+D + P + +LI F+ DRPGHD RYAID+ Sbjct: 244 RPGESYNVGGWNERANIDVVQAVCALVDEMAPDAAIGPREKLITFVTDRPGHDARYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KIK ++GW P+E E+GL KTV WYLD+ WW+ Sbjct: 304 TKIKQDLGWTPRETFETGLRKTVRWYLDHPEWWQ 337 >gi|153834837|ref|ZP_01987504.1| dTDP-glucose 4,6-dehydratase [Vibrio harveyi HY01] gi|148868708|gb|EDL67785.1| dTDP-glucose 4,6-dehydratase [Vibrio harveyi HY01] Length = 353 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D V+ +DKLTYAGNL SLKE+S + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIEDTSNVVINLDKLTYAGNLESLKEVSTNERYYFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TN+IGT+ LLE R +WS L + Sbjct: 61 DRNELDRVFNEHQPDLVMHLAAESHVDRSIDGPAAFIETNVIGTYHLLESARQYWSALEE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++KD FRF ISTDEVYG L+ + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 NRKDTFRFHHISTDEVYGDLEGTEDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TVVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ P S+ LI +++DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICALLEEFRPNKPEGVNSYESLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI E+ W P+E ESG+ KTV WYL+N WW Sbjct: 301 AIDASKIARELNWTPEETFESGIRKTVEWYLNNKDWW 337 >gi|153214722|ref|ZP_01949567.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 1587] gi|124115158|gb|EAY33978.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 1587] Length = 354 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|331677947|ref|ZP_08378622.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] gi|331074407|gb|EGI45727.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] Length = 360 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 243/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL RY++N V+ +DKLTYAGNL+SLK+I + + F+ DIC Sbjct: 1 MKILVTGGAGFIGSALTRYIINSTNDSVVNVDKLTYAGNLHSLKDIDNCDRYVFVHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + L +PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +W L Sbjct: 61 DAKALDAILSTHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARKYWQTLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E+ Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKQGFRFHHISTDEVYGDLPHPDDWDNKNSPPLFTENTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TY +P +++NCSNNYGPYHFPEKLIPL I ++ + +YG G +RDWLYVEDH Sbjct: 181 WHRTYNLPTIVTNCSNNYGPYHFPEKLIPLVILNALQDKSLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ KG +GE YNIGG NE+KNI++V I +LD + PK+ S+ E I ++ DRPGH Sbjct: 241 RALYTVITKGIVGETYNIGGYNEKKNIEVVETICDILDEIKPKNTSYREQIIYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SKI ++GW PQE ESG+ KT+ WYLDN W Sbjct: 301 DRRYAIDASKITLDLGWKPQETFESGIKKTIHWYLDNQEW 340 >gi|29726033|gb|AAO88957.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 356 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/342 (55%), Positives = 248/342 (72%), Gaps = 8/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNLNS+ I+Q + + F Q DIC Sbjct: 1 MKLLVTGGAGFIGSAVVRHIIKNTNNSVVNVDKLTYAGNLNSVVNIAQDSRYVFEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E I + + QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +W L + Sbjct: 61 NAEAIVALFAKHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARNYWKFLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 TRKQAFRFHHISTDEVYGDLHGTDNLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG G +RDWLYVEDH RALY V+ Sbjct: 181 VIVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGKGNQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS------HTELIRFIEDRPGHDR 292 +G +GE YNIGG+NE++NID+V + +L+ L P + S + LI +++DRPGHD Sbjct: 241 EGVVGETYNIGGHNEKQNIDVVKTLCAILEELAPIANSTLNIPNYESLITYVQDRPGHDL 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RYAID+SKI+ E+GW P+E E+GL KTV WYL+N WW+ + Sbjct: 301 RYAIDASKIERELGWKPEETFETGLRKTVQWYLNNKDWWQAV 342 >gi|110833771|ref|YP_692630.1| dTDP-glucose 4,6-dehydratase [Alcanivorax borkumensis SK2] gi|110646882|emb|CAL16358.1| dTDP-glucose 4,6-dehydratase [Alcanivorax borkumensis SK2] Length = 360 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/336 (56%), Positives = 244/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ V+ +DKLTYAGNL SL +S S ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIISNTDDSVVNVDKLTYAGNLESLLSVSDSPRYTFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L+ QPD I++ AAESHVDRSI G F+ TNIIGT+ LLE R +W+ L Sbjct: 61 DRHTLDGVLQRHQPDVIMHLAAESHVDRSIDGPAAFMETNIIGTYTLLEAARQYWNSLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF ISTDEVYG LD + LF+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 121 TAQQAFRFHHISTDEVYGDLDGPEDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY V Sbjct: 181 TLITNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGQGTQVRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE++NID+V + LL+ L+P + +LI + DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEKQNIDVVHTLCDLLEELVPSKPEGISQYRDLITHVRDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKI+ E+GW PQE E+G+ KTV WYLDN+ W Sbjct: 301 AIDASKIERELGWTPQETFETGIRKTVLWYLDNSEW 336 >gi|77456929|ref|YP_346434.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf0-1] gi|77380932|gb|ABA72445.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens Pf0-1] Length = 360 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+L+ + + +V+ +DKLTYAGNL SL E+S S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRFLIEETECEVINVDKLTYAGNLESLAEVSDSPRYRFCQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Sbjct: 61 DRPALDELFARLQPDAVMHLAAESHVDRSIDGPQAFIETNIVGTYTLLEAARGYWNRLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L+ F+E PY PSSPYSATKA SD+LV AW T+G+P Sbjct: 121 ARQAAFRFHHISTDEVYGDLEPEDPAFTERTPYAPSSPYSATKAGSDHLVRAWHRTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGPYHFPEKLIP I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 VVMSNCSNNYGPYHFPEKLIPHVILNALQGKLLPVYGDGAQIRDWLFVEDHARALYAVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSH-TELIRFIEDRPGHDRRY 294 +G +G+ YNIGG+NE+ N+++V + LL+A P +H +LI F++DRPGHD+RY Sbjct: 241 RGEVGQTYNIGGHNEKTNLEVVHTLCDLLEARGAEKPAGVAHFRDLITFVKDRPGHDKRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 A+D+ KI + +GW PQE ESG+ KTV WYLDN WW Sbjct: 301 AVDAGKIHATLGWTPQETFESGMQKTVDWYLDNRAWW 337 >gi|28872504|ref|NP_795123.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str. DC3000] gi|28855759|gb|AAO58818.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str. DC3000] Length = 360 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/338 (57%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + VL DKLTYAGNL SL+ I+ + + F+ DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHDVLNFDKLTYAGNLESLQSIASNTRYEFVHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L Sbjct: 61 DQAKVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +E+GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDNELGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|229512769|ref|ZP_04402237.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae TMA 21] gi|229350279|gb|EEO15231.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae TMA 21] Length = 354 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|240948929|ref|ZP_04753285.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor NM305] gi|240296744|gb|EER47355.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor NM305] Length = 356 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 250/336 (74%), Gaps = 6/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL+ + + ++F QVDICD Sbjct: 4 KILVTGGAGFIGSAVVRHIINDTQDSVINVDKLTYAGNLESLESVENNPRYAFEQVDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L ++ Sbjct: 64 KAALERVFHQYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEVARGYWNNLPEE 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEVYG L+ LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 124 RKSAFRFHHISTDEVYGDLEGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKLIPL I +EG + +YG+G +RDWL+VEDH RALY V+ + Sbjct: 184 IVTNCSNNYGPFHFPEKLIPLMILNALEGKKLPVYGNGMQIRDWLFVEDHARALYKVVTE 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P + + +LI ++ DRPGHD RYA Sbjct: 244 GVVGETYNIGGHNEKANIEVVRTICGLLEELVPNKPAGVAKYEDLITYVTDRPGHDVRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID++KI +E+GW PQE E+G+ KTV WYL+N WW Sbjct: 304 IDATKIGNELGWKPQETFETGIRKTVEWYLNNKKWW 339 >gi|254673891|emb|CBA09674.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha275] Length = 371 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLKSLTEVADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|238918075|ref|YP_002931589.1| dTDP-glucose 4,6-dehydratase, [Edwardsiella ictaluri 93-146] gi|238867643|gb|ACR67354.1| dTDP-glucose 4,6-dehydratase, putative [Edwardsiella ictaluri 93-146] Length = 356 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/339 (56%), Positives = 244/339 (71%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ D V+V+DKLTYAGNL SL ++ S+ ++F + DI D Sbjct: 5 RILVTGGAGFIGSAVVRHIIMDTTDSVVVVDKLTYAGNLASLAPVADSDRYAFERADIGD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L +++PDAI++ AAESHVDRSI G +FI TNI+GT+ LLE TR +WS L Sbjct: 65 RAAMDRILAQYRPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYTLLEATRGYWSALPVA 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF ISTDEVYG L + LF ED PY PSSPYS +KA+SD+LV AW TYG+P Sbjct: 125 LRAAFRFHHISTDEVYGDLHDPQALFREDTPYAPSSPYSTSKAASDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + + +YG+G VRDWLYVEDH ALY VL Sbjct: 185 LITNCSNNYGPYHFPEKLIPLTIINALAAKPLPVYGNGLQVRDWLYVEDHACALYRVLTT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NER+NID+V + LL ++P+ +LI ++ DRPGHD RYA Sbjct: 245 GQVGETYNIGGHNERRNIDVVTTLCALLQEMVPEKPVGVRHFADLITYVADRPGHDVRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID++KI+ E+GW PQE ESG+ KTV WYL N WWR + Sbjct: 305 IDAAKIERELGWRPQETFESGIRKTVAWYLANERWWRAV 343 >gi|332995213|gb|AEF05268.1| dTDP-glucose 4,6 dehydratase [Alteromonas sp. SN2] Length = 359 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/342 (56%), Positives = 250/342 (73%), Gaps = 10/342 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+L+N + +V+ +DKLTYAGNL SL +S + ++F QVDICD Sbjct: 4 ILVTGGAGFIGSAVVRHLINYTEHKVVNLDKLTYAGNLESLLSVSDNERYAFEQVDICDA 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ L QPD I++ AAESHVDRSI G EFI TN++GT+ LLE+ R +WS L K Sbjct: 64 DGVKAVLNTHQPDIIMHLAAESHVDRSIDGPGEFIQTNVVGTYTLLEQARAYWSTLDDVK 123 Query: 123 KDQFRFLQISTDEVYGSL------DKG----LFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K+ F+F ISTDEVYG L ++G LF+E PY PSSPYSA+KASSD LV +W Sbjct: 124 KEGFKFHHISTDEVYGDLPHPDEVEEGAELPLFTETTPYAPSSPYSASKASSDQLVRSWL 183 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +P L++NCSNNYGPYHFPEKLIPL I + G + +YG G +RDWLYVEDH RA Sbjct: 184 RTYKLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGKGNQIRDWLYVEDHARA 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L LV +G+IGE YNIGG+NE++NI++V I +LD + PK ++E I ++ DRPGHD Sbjct: 244 LVLVALEGKIGETYNIGGHNEKQNIEVVNTICDILDDVQPKDSKYSEQITYVADRPGHDM 303 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RYAID+SKI+ E+GW PQE ESG+ KTV WYL+N WW+ + Sbjct: 304 RYAIDASKIERELGWSPQETFESGIRKTVEWYLNNEGWWKAV 345 >gi|227114346|ref|ZP_03828002.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 357 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/339 (55%), Positives = 245/339 (72%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+V+DKLTYAGNL+SL ++ S+ F+F QVDICD Sbjct: 5 RILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 65 RAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADA 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G L LF+E PY PSSPYSA+KASSD+LV AW TYG P Sbjct: 125 DKRAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 185 VITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NERKNI++V I LL+ L P + + +LI +++DRPGHD RYA Sbjct: 245 GEIGETYNIGGHNERKNIEVVQTICDLLEELAPNKPAGVAHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 305 IDAGKIERELGWRPEETFETGMRKTVSWYLNNEKWWRSV 343 >gi|15676000|ref|NP_273127.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis MC58] gi|15676012|ref|NP_273142.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis MC58] gi|12644325|sp|P55294|RFBB_NEIMB RecName: Full=dTDP-glucose 4,6-dehydratase gi|7225283|gb|AAF40531.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis MC58] gi|7225297|gb|AAF40543.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis MC58] gi|316985925|gb|EFV64864.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis H44/76] gi|325141224|gb|EGC63723.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis CU385] gi|325141235|gb|EGC63734.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis CU385] gi|325199291|gb|ADY94746.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis H44/76] gi|325199302|gb|ADY94757.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis H44/76] gi|325205167|gb|ADZ00620.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M04-240196] gi|325205180|gb|ADZ00633.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M04-240196] Length = 355 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|158423457|ref|YP_001524749.1| dTDP-D-glucose-4,6-dehydratase [Azorhizobium caulinodans ORS 571] gi|158330346|dbj|BAF87831.1| dTDP-D-glucose-4,6-dehydratase [Azorhizobium caulinodans ORS 571] Length = 354 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/336 (56%), Positives = 242/336 (72%), Gaps = 4/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+LV VL DKLTYAGNL S+ ++ + F+Q DICD Sbjct: 7 RVLVTGGAGFIGSAVVRHLVA-TGATVLNFDKLTYAGNLASVGPVADHPNYQFVQADICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R AL+ F+PD +++ AAESHVDRSI G FITTNI GT+++L+E +W L Sbjct: 66 AEAVRGALEGFKPDTVMHLAAESHVDRSIDGPGAFITTNINGTYVMLQEALRYWRTLGSA 125 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEV+GSL +GLF ED PY P+SPYSA+KA+SD+LV AW HTYG+P + Sbjct: 126 AQEGFRFHHISTDEVFGSLGAEGLFREDTPYQPNSPYSASKAASDHLVRAWHHTYGLPTV 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPYHFPEKLIPL I ++G + +YG G+N+RDWLYVEDH AL L+ G Sbjct: 186 MSNCSNNYGPYHFPEKLIPLTILNALDGLKLPVYGTGENIRDWLYVEDHAEALALIAATG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 GE YN+GG NER+NID+V I +LD + P K LI F+ DRPGHD RYAID+ Sbjct: 246 TPGESYNVGGLNERRNIDVVRTICAILDEIRPDAKIGPRENLITFVTDRPGHDARYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+ +E+GW +E E+GL KTV WYLDN WW PL Sbjct: 306 TKLTTELGWKARETFETGLRKTVHWYLDNRAWWEPL 341 >gi|29725979|gb|AAO88913.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRVELDRVFAEHQPDAVMHLAAESHVDRSIDGPTAFIETNIIGTYTLLEAARHYWSQLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAVFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|225025757|ref|ZP_03714949.1| hypothetical protein EIKCOROL_02661 [Eikenella corrodens ATCC 23834] gi|224941538|gb|EEG22747.1| hypothetical protein EIKCOROL_02661 [Eikenella corrodens ATCC 23834] Length = 357 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +++TGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL E+S S ++F QVDIC Sbjct: 2 INILLTGGAGFIGSAVIRHIIRHTRDSVINLDKLTYAGNLESLAEVSGSPRYTFEQVDIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPD +++ AAESHVDRSI A EFI TNI+GTF LLE R +W L + Sbjct: 62 NRAELDRVFAQHQPDCVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARTYWLGLPE 121 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ FRF ISTDEVYG L LF+E MPY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 122 NRRSVFRFHHISTDEVYGDLHGTSDLFTETMPYAPSSPYSASKASSDHLVRAWLRTYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWL+VEDH RALY V+ Sbjct: 182 TIITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLFVEDHARALYQVIT 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G+IGE YNIGG+NE+ N+++V I LL+ L P+ + +LI F+ DRPGHD RY Sbjct: 242 QGKIGESYNIGGHNEKNNLEVVQTICTLLEELAPEKPVGVSRYADLITFVPDRPGHDLRY 301 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 302 AIDATKIGHELGWQPQETFESGMRKTVQWYLDNKIWWQ 339 >gi|84386936|ref|ZP_00989960.1| dTDP-D-glucose 4,6-dehydratase [Vibrio splendidus 12B01] gi|84378226|gb|EAP95085.1| dTDP-D-glucose 4,6-dehydratase [Vibrio splendidus 12B01] Length = 368 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/338 (55%), Positives = 245/338 (72%), Gaps = 10/338 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++N+ V+ +DKLTYAGNL SL E+ S ++F QVDIC+R Sbjct: 6 ILVTGGAGFIGSAVIRHIINNTSDSVINVDKLTYAGNLESLIEVDSSERYAFEQVDICNR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L + Sbjct: 66 SELDRVFADHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYTLLEATREYWNTLEERA 125 Query: 123 KDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K +F F ISTDEVYG L +F E Y PSSPYSA+KASSD+LV AW Sbjct: 126 KAEFCFHHISTDEVYGDLPHPDEVPEGTALPMFLETTSYEPSSPYSASKASSDHLVRAWL 185 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH RA Sbjct: 186 RTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQIRDWLFVEDHARA 245 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY V+ +G++GE YNIGG+NE+KN+++V I +LD L+PK ++ E I +++DRPGHDR Sbjct: 246 LYKVVTEGKVGETYNIGGHNEKKNLEVVNTICEILDTLVPKESAYAEQITYVQDRPGHDR 305 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAIDSSK++ E+ W P+E E+GL KTV WYLDN+ W Sbjct: 306 RYAIDSSKMQRELDWTPEETFETGLRKTVQWYLDNSTW 343 >gi|29726028|gb|AAO88953.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 356 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/340 (54%), Positives = 245/340 (72%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIICNTQDSVINLDKLTYAGNLESLVSVAASERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W+ L Sbjct: 61 DRVELDRVFVKHQPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEAARQYWNALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV A Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEVAAGSKLPLFTETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL +EG + +YG G +RDWLYV+DH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVTLNALEGKPLPIYGKGDQIRDWLYVKDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE++N+++V I +LD+L+PK + E I ++ DRPGH Sbjct: 241 RALYKVVTEGKVGETYNIGGHNEKQNLEVVQTICSILDSLVPKDTPYAEQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SK+ E+ W PQE E+GL KTV WYL N W Sbjct: 301 DRRYAIDASKMSCELDWQPQETFETGLRKTVEWYLANQEW 340 >gi|297182566|gb|ADI18726.1| dtdP-d-glucose 4,6-dehydratase [uncultured Rhizobiales bacterium HF4000_32B18] Length = 351 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 241/336 (71%), Gaps = 2/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+CR+LV V+ +DKLTYA NL+SL I+ + F++ DIC Sbjct: 1 MKILVTGGAGFIGSAVCRHLVAATDHAVVNLDKLTYAANLSSLAPIADDPRYRFVEGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++ DA+++ AAESHVDRSI G EF+ TN+ GTF LLE R W L Sbjct: 61 DRAMVAGLMETEGIDAVMHLAAESHVDRSIDGPGEFVRTNVTGTFELLEAARGHWERLPG 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KKD FRF ISTDEV+G L GLF+E+ PY PSSPYSA+KA+SD+LV+AW TYG+P Sbjct: 121 AKKDAFRFHHISTDEVFGDLPLSGGLFTEETPYEPSSPYSASKAASDHLVMAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+LSNCSNNYGPYHFPEKLIPL I + G + +YG G+NVRDWLYV+DH RAL +L Sbjct: 181 VVLSNCSNNYGPYHFPEKLIPLMILNALHGEALPVYGRGENVRDWLYVDDHARALTTILT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G G YN+GG NER N+++V I +D L P + S +L+RF+ DRPGHD RYAID+ Sbjct: 241 RGAPGRSYNVGGRNERSNLEVVHAICDTIDRLAPAATSRRDLVRFVTDRPGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++I++E+GW +E E+GL KT WYL N WWRP+ Sbjct: 301 TRIETELGWRAEETFETGLEKTARWYLANEAWWRPI 336 >gi|167623417|ref|YP_001673711.1| dTDP-glucose 4,6 dehydratase [Shewanella halifaxensis HAW-EB4] gi|167353439|gb|ABZ76052.1| dTDP-glucose 4,6-dehydratase [Shewanella halifaxensis HAW-EB4] Length = 384 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/358 (52%), Positives = 246/358 (68%), Gaps = 28/358 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL I + + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLASIESNERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE TR +W+ L++ Sbjct: 61 DRAELDRVFVKCKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNTLAE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------------------------LFSEDMPYN 152 D K FRF ISTDEVYG L LF+E Y Sbjct: 121 DAKKAFRFHHISTDEVYGDLPHPDDIEDETEPSTGKEPSADNEPSANKSLPLFTETTSYE 180 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF 212 PSSPYSA+KASSD+LV AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG G +RDWLYVEDH RALY V+ +G +GE YNIGG+NE++N+++V I +LD+L+P Sbjct: 241 IYGKGDQIRDWLYVEDHARALYKVVTEGVVGETYNIGGHNEKQNLEVVQTICAILDSLVP 300 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K + E I ++ DRPGHDRRYAIDSSK++ E+GW P E E+GL KT+ WYL N W Sbjct: 301 KETKYKEQITYVTDRPGHDRRYAIDSSKMQRELGWTPIETFETGLKKTIEWYLTNQEW 358 >gi|29726004|gb|AAO88933.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLVSVAGSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E+QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSNLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKVAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|325133137|gb|EGC55808.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M6190] Length = 355 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|34863495|gb|AAQ82925.1| dTDP-glucose 4,6-dehydratase [Raoultella terrigena] Length = 354 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V V+D LTYAGNL SL ++Q+ +SF + DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTQDDVRVVDCLTYAGNLESLASVAQNERYSFSRTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I EFQPD +++ AAESHVDRSI G FI TN+IGTF LLE R ++ L++ Sbjct: 61 DAQGIAGQFSEFQPDIVMHLAAESHVDRSIDGPAAFIQTNLIGTFTLLEAARHYYQSLNE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K +FRF ISTDEVYG L LF+E+ Y PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQRFRFHHISTDEVYGDLHGTDDLFTEETSYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ VRDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQVRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G GE YNIGG+NERKNID+V I +LD ++ P + SH +LI F++DRPGHD RY Sbjct: 241 EGHSGETYNIGGHNERKNIDVVRTICAILDKVVEQKPGNISHFADLITFVKDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW P+E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPEETFESGIEKTVHWYLNNQTWWQ 338 >gi|120598285|ref|YP_962859.1| dTDP-glucose 4,6 dehydratase [Shewanella sp. W3-18-1] gi|120558378|gb|ABM24305.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. W3-18-1] Length = 359 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 184/343 (53%), Positives = 249/343 (72%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ + ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDSVVNVDKLTYAGNLESLTSVANNARYTFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W L Sbjct: 61 DRAELDRVFLQHQPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYMLLEAARNYWMQLDT 120 Query: 121 DKKDQFRFLQISTDEVYGSL-------------DKGLFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L + LF+E+ PY PSSPYSA+KASSD+L Sbjct: 121 ERKSAFRFHHISTDEVYGDLPHPDEQEGQVVNQELPLFTENTPYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKLLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G+IGE YNIGG+NE++N+++V I +LD+L+PK+ + E I ++ DR Sbjct: 241 DHARALYKVVTEGKIGETYNIGGHNEKQNLEVVQTICSILDSLVPKATPYAEQITYVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ K+ +++ W PQE E+GL KT+ WYL N W Sbjct: 301 PGHDRRYAIDARKMSNDLNWRPQETFETGLRKTIEWYLANQEW 343 >gi|325133152|gb|EGC55823.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M6190] Length = 360 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|183600264|ref|ZP_02961757.1| hypothetical protein PROSTU_03818 [Providencia stuartii ATCC 25827] gi|188020054|gb|EDU58094.1| hypothetical protein PROSTU_03818 [Providencia stuartii ATCC 25827] Length = 355 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 241/337 (71%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++ + +V+D LTYAGNL SL E+S S+ ++F QV+IC Sbjct: 3 RILITGGAGFIGSAVVRHIIENTNDSAVVVDCLTYAGNLESLSEVSNSDRYAFEQVNICH 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W L Sbjct: 63 RAELDRVFAKYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWMGLDAA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK QFRF ISTDEVYG L+ G F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKAQFRFHHISTDEVYGDLEGPDGFFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG G+ +RDWL+VEDH RALYLV Sbjct: 183 MITNCSNNYGPYHFPEKLIPLIIINALAGKPLPVYGKGEQIRDWLFVEDHARALYLVATT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 + G YNIGG+NER+NID+V I LL+ L P+ + +LI ++ DRPGHD RYA Sbjct: 243 AQPGTTYNIGGHNERRNIDVVETICELLEELHPQKPEGVAHYRDLITYVTDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDADKIARELGWTPQETFESGIRKTVQWYLNNETWWR 339 >gi|115279709|gb|ABI85325.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|90021776|ref|YP_527603.1| dTDP-glucose 4,6-dehydratase [Saccharophagus degradans 2-40] gi|89951376|gb|ABD81391.1| dTDP-glucose 4,6-dehydratase [Saccharophagus degradans 2-40] Length = 358 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/341 (54%), Positives = 245/341 (71%), Gaps = 10/341 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ RY++N K V+ +DKLTYAGNL SL +S S+ ++F QVDIC Sbjct: 1 MKIMVTGGAGFIGSAVIRYIINQTKHSVVNVDKLTYAGNLQSLVGVSSSSRYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ K +P+ +++ AAESHVDRSI G F+ TNIIGT+ LLE+ R +W L Sbjct: 61 DAVALKRIFKLHEPNIVMHLAAESHVDRSIDGPSVFMQTNIIGTYTLLEQARAYWLTLRG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + K QFRF ISTDEV+G L + LF+E+ YNPSSPYSA+KASSD+LV A Sbjct: 121 ENKTQFRFHHISTDEVFGDLPHPDFVRQSGELPLFTEETGYNPSSPYSASKASSDHLVKA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I + G + +YG+G +RDWLYVEDH Sbjct: 181 WAKTYGLPTVITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGEGNQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV +G++ E YNIGG+NE+KNI++V I +LD + P++ + + I F+ DRPGH Sbjct: 241 EALILVATEGKVSETYNIGGHNEKKNIEVVHAICKILDEVKPQATKYADQITFVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D RYAID++KI+ E+GW P+E E+GL KTV WYL N WW Sbjct: 301 DMRYAIDATKIQKELGWQPKETFETGLRKTVLWYLQNEAWW 341 >gi|167856001|ref|ZP_02478747.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis 29755] gi|167852883|gb|EDS24151.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis 29755] Length = 351 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/342 (54%), Positives = 257/342 (75%), Gaps = 6/342 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++++TGGAGFIGSA+ RY++N+ + V+ IDKLTYAGNL+SL+EIS S+ ++F Q+DIC Sbjct: 3 IKILITGGAGFIGSAMIRYIINNTQDLVINIDKLTYAGNLSSLEEISNSSRYAFKQIDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + E+QPD +++ AAESHVDRSI ++ FI TNI GT+ LLE R +W+ L + Sbjct: 63 DKIALEQIFNEYQPDIVMHLAAESHVDRSIKNSEVFIKTNIWGTYTLLEVARKYWNDLPE 122 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L + F+E MPY PS+PYSA+KA+SD+LV AW TYG+P Sbjct: 123 EKKSIFRFHHISTDEVYGDLGTSERQFTEIMPYAPSNPYSASKAASDHLVHAWRRTYGVP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP+HFPEKLIPL I IEG + +YG+G VRDWL+VEDHVRALY V+K Sbjct: 183 TIVTNCSNNYGPFHFPEKLIPLIILNAIEGKKLPIYGNGLQVRDWLFVEDHVRALYKVIK 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +GR+GE YNIGG++ + N+++V+ I +L+ L+P + +LI ++ DR GHD RY Sbjct: 243 EGRVGESYNIGGDSTKSNLEVVYAICEILEELLPHKPKGVQKYKDLISYVPDRLGHDTRY 302 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 AIDS+KI+ E+ W PQE ESG+ KTV WYL+N WW+ + K Sbjct: 303 AIDSTKIREELDWKPQETFESGIRKTVEWYLNNQKWWKSIRK 344 >gi|145298428|ref|YP_001141269.1| dTDP-glucose 4,6 dehydratase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851200|gb|ABO89521.1| dTDP-glucose-4,6-dehydratase [Aeromonas salmonicida subsp. salmonicida A449] Length = 366 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/345 (54%), Positives = 247/345 (71%), Gaps = 15/345 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + K V+ +DKLTYAGN SL E++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIRNTKDAVVNLDKLTYAGNRESLAEVAASERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W+ L+ Sbjct: 61 NRSELDRVFALHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYTLLEAARAYWNELND 120 Query: 121 DKKDQFRFLQISTDEVYG------SLDKG---------LFSEDMPYNPSSPYSATKASSD 165 +K FRF ISTDEVYG + G LF+E PY PSSPYSA+KASSD Sbjct: 121 TRKATFRFHHISTDEVYGDQPHPDEVSAGHPLWNKPLPLFTETTPYAPSSPYSASKASSD 180 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLY Sbjct: 181 HLVRAWRRTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQIRDWLY 240 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 VEDH RALY V+ G +GE YNIGG+NE++N+D+V + LLD ++PK+ S+ + I ++ Sbjct: 241 VEDHARALYKVVTTGLVGETYNIGGHNEKQNLDVVHTVCDLLDEMVPKTGSYRDQITYVA 300 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRPGHDRRYAID+SK+ +E+ W P+E ESG+ KTV WYLDN W Sbjct: 301 DRPGHDRRYAIDASKMSAELDWQPEETFESGIRKTVQWYLDNQQW 345 >gi|29726014|gb|AAO88941.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILITGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVANSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPADVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|212710193|ref|ZP_03318321.1| hypothetical protein PROVALCAL_01252 [Providencia alcalifaciens DSM 30120] gi|212687192|gb|EEB46720.1| hypothetical protein PROVALCAL_01252 [Providencia alcalifaciens DSM 30120] Length = 357 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++ + + +V+D LTYAGNL SL ++ S ++F QV+ICD Sbjct: 5 RILITGGAGFIGSAVVRHVIENTQDHAIVVDCLTYAGNLESLAGVANSERYAFEQVNICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E +PD +++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 65 RTALDKVFAEHKPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWSALEES 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEVYG LD +G F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 QKAAFRFHHISTDEVYGDLDGPEGFFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWL+VEDH RAL+LV + Sbjct: 185 MITNCSNNYGPYHFPEKLIPLIILNAISGKPLPVYGKGEQIRDWLFVEDHARALHLVATQ 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 + G YNIGG+NER+NI +V I LL+ L P+ + +LI +++DRPGHD RYA Sbjct: 245 AQPGSTYNIGGHNERRNIQVVETICELLEELHPQKPQGVTHYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW P+E ESG+ KTV WYL+N WWR Sbjct: 305 IDADKIQRELGWTPEETFESGIRKTVLWYLNNETWWR 341 >gi|330962125|gb|EGH62385.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 360 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+ + + VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLIYNTEHDVLNFDKLTYAGNLESLQSIATNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE TR +W L + Sbjct: 61 DQAKVSAVLERFAPHAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ + +++LI ++ DRPGHD+RY Sbjct: 241 EGEVGETYNIGGHNEQKNIDVVRGICTLLDELTPQHPAGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +GW P+E ESGL KTV WYLDN W R Sbjct: 301 AIDASKIDKYLGWTPEETFESGLRKTVQWYLDNLDWCR 338 >gi|268592928|ref|ZP_06127149.1| dTDP-glucose 4,6-dehydratase [Providencia rettgeri DSM 1131] gi|291311721|gb|EFE52174.1| dTDP-glucose 4,6-dehydratase [Providencia rettgeri DSM 1131] Length = 357 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 245/336 (72%), Gaps = 6/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++ + +V+D LTYAGNL SL ++ ++F QV+ICD Sbjct: 5 RILITGGAGFIGSAVVRHIIENTDDSAVVLDCLTYAGNLESLATVANDPRYAFEQVNICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L+ + Sbjct: 65 RAALDAVFEKYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWSALNDE 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ G F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 KKAAFRFHHISTDEVYGDLEGPDGFFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG G+ +RDWL+VEDH RAL+LV Sbjct: 185 MITNCSNNYGPYHFPEKLIPLIILNALAGKPLPVYGKGEQIRDWLFVEDHARALHLVATT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 + G YNIGG+NER+NID+V I LL+ L P+ + +LI F++DRPGHD RYA Sbjct: 245 AQPGTTYNIGGHNERRNIDVVETICELLEELHPQKPQGVAHYRDLITFVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID++KI+ E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 IDAAKIERELGWTPQETFESGIRKTVQWYLNNETWW 340 >gi|330874357|gb|EGH08506.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 360 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 247/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + VL DKLTYAGNL SL+ I+ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHDVLNFDKLTYAGNLESLQSIASNTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EF+ TNI+GT+ LLE R +W L Sbjct: 61 DQAKVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEAARAYWLKLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 VERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+KNID+V I LLD L P+ +++LI ++ DRPGHD+RY Sbjct: 241 EGDVGETYNIGGHNEQKNIDVVRGICSLLDELAPQHPDGVQHYSDLITYVVDRPGHDQRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI +E+GW P+E ES L KTV WYLDN W R Sbjct: 301 AIDASKIDNELGWTPEETFESALRKTVQWYLDNLDWCR 338 >gi|254225683|ref|ZP_04919290.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae V51] gi|125621803|gb|EAZ50130.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae V51] Length = 357 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/340 (55%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +D LTYAGNL SL + + ++F QV+IC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQNTQDSVVNLDCLTYAGNLESLASVETNGRYAFEQVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L Sbjct: 61 DRTELDRVFAEHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYTLLEATRQYWNKLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L LF E PY PSSPYSA+KASSD+LV A Sbjct: 121 KAKLSFRFHHISTDEVYGDLPHPDEVVEGSKLPLFLETTPYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH Sbjct: 181 WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G++GE YNIGG+NE++N+++V I +LD L+PK+ + E I +++DRPGH Sbjct: 241 RALYKVVTEGKVGETYNIGGHNEKQNLEVVQTICSILDTLVPKARPYAEQITYVQDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAIDSSK++ E+GW P E E+GL KTV WYLDN W Sbjct: 301 DRRYAIDSSKMQKELGWTPLETFETGLLKTVQWYLDNQQW 340 >gi|152971036|ref|YP_001336145.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955885|gb|ABR77915.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 354 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/338 (55%), Positives = 246/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTQDEVRVMDCLTYAGNLESLATVADSERYSFTQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +F+PD +++ AAESHVDRSI G FI TN+IGTF LLE R ++S L Sbjct: 61 DAKSVSEQFSDFRPDIVMHLAAESHVDRSIDGPAAFIQTNLIGTFTLLEAARHYYSTLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E+ PY PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVEDH RALY V Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +G GE YNIGG+NERKNID+V I +LD ++ P + S +LI F++DRPGHD RY Sbjct: 241 EGESGETYNIGGHNERKNIDVVRTICAILDKVVEQKPGNISQFADLITFVKDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 AIDAAKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 338 >gi|89073286|ref|ZP_01159816.1| dTDP-glucose 4,6-dehydratase [Photobacterium sp. SKA34] gi|89050996|gb|EAR56460.1| dTDP-glucose 4,6-dehydratase [Photobacterium sp. SKA34] Length = 359 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL + +N + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLLTVENNNRYEFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNI+GT+ +LE TR +W L Q Sbjct: 61 DRSELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTILEATRAYWGQLDQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 TRKTTFRFHHISTDEVYGDLEDTNDLFTETTSYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYG YHFPEKLIPL I ++G ++ +YGDG +RDWLYVEDH ALY V+ Sbjct: 181 SIVTNCSNNYGLYHFPEKLIPLIILNALDGKNLPVYGDGAQIRDWLYVEDHASALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 KG +GE YNIGG+NE+ NI++V I LL+ L+P + +LI ++DRPGHD RY Sbjct: 241 KGEVGETYNIGGHNEKANIEVVRTICSLLEELVPNKPDGVEQYQDLIIHVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P E ESG+ KTV WYL+N WW Sbjct: 301 AIDASKIERELGWKPAETFESGIRKTVEWYLNNKTWW 337 >gi|388933|gb|AAA63157.1| TDP-glucose-dehydratase [Neisseria meningitidis] Length = 360 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|159154694|gb|ABW93679.1| dTDP-D-glucose 4,6-hydratase [Neisseria meningitidis] gi|254673658|emb|CBA09233.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha275] Length = 355 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|294140251|ref|YP_003556229.1| dTDP-glucose 4,6-dehydratase [Shewanella violacea DSS12] gi|293326720|dbj|BAJ01451.1| dTDP-glucose 4,6-dehydratase [Shewanella violacea DSS12] Length = 348 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/332 (56%), Positives = 244/332 (73%), Gaps = 2/332 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL E+S S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIKNTNDSVINLDKLTYAGNLESLLEVSNSERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W L + Sbjct: 61 NRTELERVFSEHKPDALMHLAAESHVDRSIDGPAAFIETNIVGTYQLLEATRQYWLTLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E+ Y PSSPYSA+KASSD+LV W TYG+P Sbjct: 121 QQKSAFRFHHISTDEVYGDLEGTTDLFTENTSYEPSSPYSASKASSDHLVRTWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG G+ +RDWLYVEDH RALY V+ Sbjct: 181 TIITNCSNNYGPYHFPEKLIPLVILNALEGKLLPIYGKGEQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G IGE YN+GG+NE++NI++V I +L+ L+P+ + E I F++DRPGHD RYAID+ Sbjct: 241 EGNIGETYNVGGHNEKRNIEVVETICDILNELVPQQTDYKEQITFVKDRPGHDMRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI+ E+ W P E E+GL KTV WYL+N W Sbjct: 301 SKIEKELDWTPIETFETGLRKTVEWYLENKTW 332 >gi|253690367|ref|YP_003019557.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756945|gb|ACT15021.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 355 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/339 (55%), Positives = 243/339 (71%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+++DKLTYAGNL+SL ++ S F+F QVDICD Sbjct: 3 RILITGGAGFIGSALVRYILTETQDSVVIVDKLTYAGNLSSLAPVADSERFAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + K +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 63 RAELDRVFKTYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQSLADA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G L LF+E Y PSSPYSA+KASSD+LV AW TYG P Sbjct: 123 DKCAFRFHHISTDEVFGDLHGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTYGFPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYA 295 G IGE YNIGG+NERKNI++V I LL+ L P + E LI +++DRPGHD RYA Sbjct: 243 GEIGETYNIGGHNERKNIEVVQTICALLEELAPNKPAGVEHYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 303 IDAGKIERELGWRPEETFETGMRKTVNWYLNNEKWWRSV 341 >gi|323960872|gb|EGB56492.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H489] Length = 361 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/340 (55%), Positives = 242/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R++++D V+ +DKLTYAGNL SL +S S +SF QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIISDTGDSVINLDKLTYAGNLESLASVSSSERYSFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +WS L + Sbjct: 61 NRAELDRVFALHQPDAVMHLAAESHVDRSITGPADFIETNIVGTYTLLEAARAYWSSLGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 LSKAAFRFHHISTDEVYGDLPHPDEVASGEALPLFTETTSYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 181 WYRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G +GE YNIGG+NE++N+D+V I LLD ++PK+ S+ + I ++ DRPGH Sbjct: 241 RALYKVVTTGLVGETYNIGGHNEKQNLDVVHTICDLLDEMVPKAGSYRDQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ K+ + + W P+E ESG+ KTV WYLDN W Sbjct: 301 DRRYAIDACKMSAALDWQPEETFESGIRKTVQWYLDNQQW 340 >gi|316935621|ref|YP_004110603.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris DX-1] gi|315603335|gb|ADU45870.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris DX-1] Length = 343 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/335 (56%), Positives = 247/335 (73%), Gaps = 3/335 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGSA+CRYL+ QV+ +DKLTYAGNL SLK I + + F+Q DI DR Sbjct: 4 VFVTGGAGFIGSAVCRYLIERTDAQVVNLDKLTYAGNLQSLKTIEDNPRYRFVQGDIGDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + L++ +P +++ AAESHVDRSI GA +FI TNI+GTF LLE R + LS + Sbjct: 64 ELVSALLRDARPTHVMHLAAESHVDRSIRGAGDFIDTNIVGTFRLLEAARAYRDELSGEA 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +DQFRFL +STDEVYG+L D G F E PY P+SPYSA+KA+SD+LV AW HTYG P L+ Sbjct: 124 RDQFRFLHVSTDEVYGTLGDTGYFVETTPYAPNSPYSASKAASDHLVRAWFHTYGFPALI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGPY +PEKL+ ITR + + ++G G N+RDWLYVEDH +AL+LV+ +GR Sbjct: 184 SNCSNNYGPYQYPEKLVGRTITRALARQSLPVFGQGLNIRDWLYVEDHAQALWLVVSRGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSS 299 +GE+YNIGG NER+NID+V I LLDA + + + LI F+ DR GHD RYAID++ Sbjct: 244 LGEQYNIGGRNERRNIDLVKRICTLLDAKTSDAPAGGYASLIEFVVDRAGHDFRYAIDAT 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI++E+GW + + +SG+ TV WYL N WWW+PL Sbjct: 304 KIETELGWKAEHDFDSGIEATVDWYLANEWWWKPL 338 >gi|254671512|emb|CBA09102.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha153] Length = 360 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|295148946|gb|ADF80946.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +W L Sbjct: 61 DRADLDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWKHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVKTLCALLEELVPNKPAGIAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|262192436|ref|ZP_06050588.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae CT 5369-93] gi|262031700|gb|EEY50286.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae CT 5369-93] Length = 354 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTPDSVVNLDKLTYAGNLESLASVANSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSQLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAVFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGIAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|325135198|gb|EGC57823.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M13399] Length = 355 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRIFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI +++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITYVKDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 303 IDAAKIGRELGWQPQETFESGIRKTVEWYLDNKTWWQ 339 >gi|259906870|ref|YP_002647226.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|224962492|emb|CAX53947.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|283476662|emb|CAY72490.1| dTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae DSM 12163] Length = 355 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ +VLV+DKL+YAGNL SL ++++ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHILSSTPDRVLVLDKLSYAGNLASLAPVAENPRFAFSKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + A+ FQP I++ AAESHVDRSI G F+ TNI+GT+++LE R +W+ L Sbjct: 63 RAALDGAIAAFQPQLIMHLAAESHVDRSIDGPLAFVETNIVGTYMMLEAARHYWTSLPAP 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ F F ISTDEV+G L D F+E PY PSSPYSATKASSD+LV AW TYG+PV Sbjct: 123 ERSAFIFHHISTDEVFGDLENDTDFFTETTPYAPSSPYSATKASSDHLVRAWHRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH RALY V+ Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVDDHARALYQVVTA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G++GE YNIGG++ER+NID+V + LL+ L P+ + + +LI + DRPGHDRRYA Sbjct: 243 GKVGETYNIGGHSERRNIDVVETLCALLEELAPEKPAGLGHYRDLITRVADRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV W+++N WW+ Sbjct: 303 IDAGKIERELGWRPQETFESGMRKTVSWFINNPAWWQ 339 >gi|260877871|ref|ZP_05890226.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AN-5034] gi|193787947|dbj|BAG50456.1| dTDP-D-glucose 4,6-dehydratase [Vibrio parahaemolyticus] gi|308090071|gb|EFO39766.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus AN-5034] Length = 354 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/338 (56%), Positives = 245/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL +++ S+ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIRDTQDSVVNLDKLTYAGNLESLVDVADSDRYYFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TN++GT+ LLE R +WS L + Sbjct: 61 DRTELDRVFSEHQPDMVMHLAAESHVDRSIDGPAAFIETNVMGTYHLLEAARQYWSSLEE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ANKSAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ L P S+ LI +++DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICALLEELRPDKPAGVESYESLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+GW P+E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDATKIAQELGWTPEETFESGIRKTVEWYLNNPQWWQ 338 >gi|325135187|gb|EGC57812.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M13399] Length = 360 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 247/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + QPDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRIFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI +++DRPGHD RYAI Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITYVKDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 309 DAAKIGRELGWQPQETFESGIRKTVEWYLDNKTWWQ 344 >gi|313747656|gb|ADR74235.1| RmlB [Escherichia coli] Length = 356 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/342 (55%), Positives = 243/342 (71%), Gaps = 11/342 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DTAAMARIFALHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G +GE YNIGG+NE KN+D+V+ I LLD ++PK S+ + I ++ DR GH Sbjct: 241 RALYTVVTQGIVGETYNIGGHNE-KNLDVVYTICDLLDEILPKEGSYRDQITYVTDRLGH 299 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRRYAI++ KI +GW PQE ESG+ KTV WYL+N W R Sbjct: 300 DRRYAINADKISQTLGWKPQETFESGIRKTVEWYLNNTNWCR 341 >gi|298370181|ref|ZP_06981497.1| dTDP-glucose 4,6-dehydratase [Neisseria sp. oral taxon 014 str. F0314] gi|298281641|gb|EFI23130.1| dTDP-glucose 4,6-dehydratase [Neisseria sp. oral taxon 014 str. F0314] Length = 355 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIKNTQDSVVNLDKLTYAGNLESLTDVADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQRMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVGGETYNIGGHNEKANIEVVKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYL+N WW+ Sbjct: 303 IDAAKIGRELGWKPQETFESGIRKTVQWYLNNKTWWQ 339 >gi|308125432|ref|ZP_05775277.2| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus K5030] gi|308111322|gb|EFO48862.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus K5030] Length = 358 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/338 (55%), Positives = 243/338 (71%), Gaps = 10/338 (2%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGSAL R+++ + V+ +D LTYAGNL SL + QS + F QV+ICDR Sbjct: 1 MTGGAGFIGSALVRHIIKNTSDSVVNVDCLTYAGNLESLGSVIQSERYVFEQVNICDRAE 60 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + + +PDA+++ AAESHVDRSI G FI TN++GT+ +LE TR +WS L + K Sbjct: 61 LNRVFEAHKPDAVMHLAAESHVDRSITGPAAFIETNVVGTYTMLEATREYWSKLDDNAKA 120 Query: 125 QFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 FRF ISTDEVYG L + +F E PY PSSPYSA+KASSD+LV AW T Sbjct: 121 AFRFHHISTDEVYGDLPHPDEVSDGKELPMFLETTPYEPSSPYSASKASSDHLVRAWLRT 180 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VEDH RALY Sbjct: 181 YGLPTMVTNCSNNYGPYHFPEKLIPLVILNALEGKDLPIYGKGDQIRDWLFVEDHARALY 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+ +G++GE YNIGG+NE+KNI++V I +LD L+PK +++E I +++DRPGHDRRY Sbjct: 241 KVITEGKVGETYNIGGHNEKKNIEVVNTICEILDTLVPKQTAYSEQITYVQDRPGHDRRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AIDSSK++ E+ W P+E E+GL KTV WYLDN W + Sbjct: 301 AIDSSKMQRELNWTPEETFETGLRKTVQWYLDNPTWCK 338 >gi|288549835|ref|ZP_05968346.2| dTDP-glucose 4,6-dehydratase [Enterobacter cancerogenus ATCC 35316] gi|288317582|gb|EFC56520.1| dTDP-glucose 4,6-dehydratase [Enterobacter cancerogenus ATCC 35316] Length = 378 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/345 (54%), Positives = 247/345 (71%), Gaps = 11/345 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSA+ R+++N+ + +V+ +DKLTYAGNL SL ++S ++F DIC Sbjct: 22 VKILVTGGAGFIGSAVVRHIINNTQDEVVNVDKLTYAGNLESLSDVSGHARYAFEHADIC 81 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + E +PDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 82 DKTAMDRIFAEHKPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARAYWSKLDE 141 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 142 AAKNAFRFHHISTDEVYGDLPHPDEHPSSAELPLFTETTAYAPSSPYSASKASSDHLVRA 201 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG P +++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 202 WLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALDGKALPIYGKGDQIRDWLYVEDHA 261 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE++N+D+V I LLD ++PK S+ + I ++ DRPGH Sbjct: 262 RALYTVVTRGKPGETYNIGGHNEKQNLDVVHTICDLLDEIVPKEGSYRDQITYVADRPGH 321 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPL 334 DRRYAID+ KI E+GW P+E ESG+ KTV WYL N NW R L Sbjct: 322 DRRYAIDAHKISVELGWKPEETFESGIRKTVKWYLINKNWCMRVL 366 >gi|307302363|ref|ZP_07582121.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica BA175] gi|306914401|gb|EFN44822.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica BA175] Length = 356 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/340 (55%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ K V+ +DKLTYAGNL SL +S + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIDNTKDSVVNLDKLTYAGNLESLLSVSIDSRYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + K+ QPDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W + Sbjct: 61 NSTELNRVFKQHQPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYTLLEAARQYWMQMDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 ERKSVFRFHHISTDEVYGDLPHPDEVENVESLPLFTEATSYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WQRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ G++GE YNIGG+NE++NI++V I +LD L+PK S+ E I ++ DRPGH Sbjct: 241 RALYKVVTTGKVGETYNIGGHNEKQNIEVVETICTILDELVPKVTSYIEQITYVTDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID++K+ E+ W PQE E+GL KTV WYL N W Sbjct: 301 DRRYAIDATKMSIELNWQPQETFETGLRKTVEWYLANLKW 340 >gi|114563994|ref|YP_751508.1| dTDP-glucose 4,6-dehydratase [Shewanella frigidimarina NCIMB 400] gi|114335287|gb|ABI72669.1| dTDP-glucose 4,6-dehydratase [Shewanella frigidimarina NCIMB 400] Length = 367 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAGFIGSA+ R ++ + + V+ +D LTYAGNL SL E+S + +SF QV+IC Sbjct: 4 MLFLITGGAGFIGSAVIRNIILNTEHSVINVDALTYAGNLESLSEVSDNERYSFKQVNIC 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E++PDA+++ AAE+HVDRSI G FI TNI+GT+ LLE TR +W+ L++ Sbjct: 64 DSRALARIFTEYKPDAVMHLAAETHVDRSIDGPAAFIETNIVGTYTLLEATRAYWNTLTK 123 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+K FRF ISTDEVYG L+ LF+E+ Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 124 DRKSAFRFHHISTDEVYGDLEGTDDLFTEETSYEPSSPYSASKASSDHLVRAWLRTYGLP 183 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 184 TIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYRVVT 243 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L+P +++LI ++ DRPGHD RY Sbjct: 244 EGVVGETYNIGGHNEKSNIEVVKTICSLLEELVPNKPNGITQYSDLITYVTDRPGHDFRY 303 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI ++GW P+E+ ESG+ KTV WYLDN WW Sbjct: 304 AIDASKIDQKLGWKPEESFESGIRKTVEWYLDNKQWW 340 >gi|325145411|gb|EGC67687.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240013] Length = 355 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLSGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|188533477|ref|YP_001907274.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] gi|188028519|emb|CAO96381.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] Length = 357 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/338 (56%), Positives = 248/338 (73%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + VL +DKLTYAGNL SL++IS S + F + DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIKNTNDTVLNVDKLTYAGNLESLQDISDSPRYHFSKTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +F+PD +++ AAESHVDRSI G FI TNIIGT++LLE R++W L Sbjct: 61 DPESLNRIFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARIYWFGLPF 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ FRF ISTDEV+G L LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKEAFRFHHISTDEVFGDLHGTDDLFTEQTAYAPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ VRDWLYVEDH RALY V Sbjct: 181 VIVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGKQVRDWLYVEDHARALYRVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYS---HTELIRFIEDRPGHDRRY 294 GR+GE YNIGG+NER+NID+V I +L+ L + K Y ++ LI F+ DRPGHD RY Sbjct: 241 AGRVGETYNIGGHNERQNIDVVNTICKILNRLVVDKPYGVDDYSALITFVRDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+GW P+E E+G+ KTV WYL+N WW+ Sbjct: 301 AIDATKIGKELGWLPEETFETGVEKTVRWYLENTEWWQ 338 >gi|218708289|ref|YP_002415910.1| dTDP-D-glucose-4,6-dehydratase [Vibrio splendidus LGP32] gi|218321308|emb|CAV17258.1| dTDP-D-glucose-4,6-dehydratase [Vibrio splendidus LGP32] Length = 358 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/350 (53%), Positives = 254/350 (72%), Gaps = 13/350 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + ++GGAGFIGSA+ R+++ + ++ +DKLTYAGN+ S+ IS S+ + F+Q DI D Sbjct: 2 IFISGGAGFIGSAVVRHIITNTTESIVNVDKLTYAGNVESIALISGSDRYHFVQADISDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +++QP A+++ AAESHVDRSI G +F+ TNI+GTF LLE R++WS L QDK Sbjct: 62 DAMAEVFEKYQPTAVMHLAAESHVDRSIDGPADFMQTNIMGTFTLLEAARVYWSTLPQDK 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L+ LF+E+ Y PSSPYSA+KASSD+LV AW TYG+PV+ Sbjct: 122 RETFRFHHISTDEVYGDLEGTDELFTEETSYEPSSPYSASKASSDHLVRAWNRTYGLPVI 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIP I ++ + +YGDG +RDWLYVEDH RALY V+ +G Sbjct: 182 VTNCSNNYGPYHFPEKLIPHVILNALDAKPLPIYGDGSQIRDWLYVEDHARALYKVVTEG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----------YSHTELIRFIEDRPGH 290 +GE YNIGG+NE+KNI++V + +LD L P S ++ ELI F++DRPGH Sbjct: 242 VVGETYNIGGHNEKKNIEVVETLCTILDELKPISDNPAFTSSSIVNYNELITFVKDRPGH 301 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPLYKELK 339 D RYAID+SKI+ E+GW P+E+ E+G+ KTV WYL N NWW R L E + Sbjct: 302 DVRYAIDASKIEKELGWVPEESFETGIRKTVEWYLSNENWWKRVLNGEYQ 351 >gi|325203191|gb|ADY98644.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240355] gi|325203203|gb|ADY98656.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240355] Length = 355 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QREAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P + +LI +++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVRTICALLEELVPNKPQGVARYEDLITYVKDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|254805862|ref|YP_003084083.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha14] gi|254669404|emb|CBA08589.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha14] gi|325143301|gb|EGC65637.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] gi|325143316|gb|EGC65651.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] gi|325143339|gb|EGC65672.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] gi|325197363|gb|ADY92819.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis G2136] gi|325197378|gb|ADY92834.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis G2136] Length = 360 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 247/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|121633945|ref|YP_974190.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis FAM18] gi|121633957|ref|YP_974202.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis FAM18] gi|120865651|emb|CAM09371.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis FAM18] gi|120865663|emb|CAM09387.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis FAM18] gi|261391609|emb|CAX49047.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 8013] gi|261391622|emb|CAX49064.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 8013] Length = 355 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|288816242|gb|ADC54962.1| RmlB [Escherichia coli] Length = 361 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/340 (55%), Positives = 240/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYIFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNNEELPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNI++V I LLD ++PK + E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIEVVLTICDLLDEIVPKEKFYCEQINYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+AID+ K+ E+GW P E ESG+ KTV WYL N W Sbjct: 301 YCRFAIDAEKVSRELGWKPPETFESGICKTVEWYLSNTKW 340 >gi|304398137|ref|ZP_07380012.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. aB] gi|304354423|gb|EFM18795.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. aB] Length = 356 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 241/340 (70%), Gaps = 7/340 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TGGAGFIGSAL R+L+ + + QV+V+DKL+YAGNL SL ++ S+ F F QVDICD Sbjct: 3 RFLITGGAGFIGSALVRFLIAETEHQVVVVDKLSYAGNLASLASVANSDRFCFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W L Sbjct: 63 RTALDEVFARHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTWQLLEAARSYWQTLDDA 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F F ISTDEV+G L + F+E PY PSSPY+A+KASSD+LV AW TYG+P Sbjct: 123 RKRAFLFHHISTDEVFGDLHDSQAYFTETTPYAPSSPYAASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPCHFPEKLIPLTIINALAGKALPVYGNGQQIRDWLYVEDHARALYQVVSY 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI----PKSYSH-TELIRFIEDRPGHDRRY 294 G+ GE YNIGG+NER+NI++V I LL+ L P +H +LI ++ DRPGHD+RY Sbjct: 243 GKPGETYNIGGHNERRNIEVVETICSLLEELAAEQKPAGLAHYRDLITYVADRPGHDQRY 302 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID+SKI E+GW PQE ESG+ KTV WYL N WW+ + Sbjct: 303 AIDASKIAHELGWVPQETFESGMRKTVAWYLANPAWWQAI 342 >gi|88813322|ref|ZP_01128560.1| dTDP-glucose 4,6-dehydratase [Nitrococcus mobilis Nb-231] gi|88789380|gb|EAR20509.1| dTDP-glucose 4,6-dehydratase [Nitrococcus mobilis Nb-231] Length = 362 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 183/331 (55%), Positives = 242/331 (73%), Gaps = 1/331 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSAL RYL+ + + V+ +D LTYAG+ +++ ++Q + F DIC Sbjct: 1 MKILITGGAGFIGSALVRYLIGETEHCVVNVDALTYAGDPSTVASVAQDPRYRFYHTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+ +PDA+++ AAESHVDRSI G EFI TNI GT+ LLE R +W+ L+ Sbjct: 61 DAAALRALFASEKPDAVMHLAAESHVDRSIDGPAEFIRTNIHGTYCLLEAARAYWTELAP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++++FRF ISTDEV+G+L G F+E PY P+SPY+A+KASSD+LV AW HTYG P Sbjct: 121 TEQERFRFHHISTDEVFGALGANGCFTEASPYRPNSPYAASKASSDHLVRAWCHTYGFPA 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +LSNCSNNYGPY FPEKLIPL ITR + G + +YGDG+NVRDWL+V+DH RAL VL + Sbjct: 181 VLSNCSNNYGPYQFPEKLIPLQITRALAGRSLPVYGDGRNVRDWLFVDDHARALVRVLTR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE YNIGGN ER N+ +V + LD L P++ H LI F+ DRPGHD RYAID+ Sbjct: 241 GRVGESYNIGGNAERTNLQVVETLCAQLDRLRPQTQPHARLIEFVSDRPGHDFRYAIDAG 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P+E+ +SGL KTV WYLD W Sbjct: 301 KVRRELGWSPEESFDSGLEKTVRWYLDRPDW 331 >gi|29725999|gb|AAO88929.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLVSVAGSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAGYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSNLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKVAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|153001416|ref|YP_001367097.1| dTDP-glucose 4,6 dehydratase [Shewanella baltica OS185] gi|151366034|gb|ABS09034.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS185] Length = 358 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/342 (55%), Positives = 245/342 (71%), Gaps = 12/342 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL R+++N+ V+ +DKLTYAGNL SL +S+S + F VDIC Sbjct: 1 MKILVTGGAGFIGSALIRHVINETTDSVINVDKLTYAGNLESLAAVSESPRYFFELVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + +QPDA+++ AAESHVDRSI G EFI TNI+GT+ LLE R ++S L Sbjct: 61 DREELDRVFQLYQPDAVMHLAAESHVDRSITGPAEFIQTNIVGTYTLLEAARSYFSSLDL 120 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 + K +FRF ISTDEVYG L + LF+E+ Y PSSPYSA+KASSD+LV Sbjct: 121 EAKTKFRFHHISTDEVYGDLPHPDELHSLSNQELPLFTENTSYAPSSPYSASKASSDHLV 180 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWL+VED Sbjct: 181 RAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLFVED 240 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H RALY V+ KG +GE YNIGG+NE++NI++V I +LD L PK+ + E + ++ DRP Sbjct: 241 HARALYKVVTKGTVGETYNIGGHNEKQNIEVVETICSILDELKPKNNKYIEQVTYVTDRP 300 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 GHDRRYAID+SK+ E+ W P E E+GL KTV WYL N W Sbjct: 301 GHDRRYAIDASKMSIELNWQPLETFETGLRKTVEWYLANQEW 342 >gi|296447931|ref|ZP_06889840.1| dTDP-glucose 4,6-dehydratase [Methylosinus trichosporium OB3b] gi|296254568|gb|EFH01686.1| dTDP-glucose 4,6-dehydratase [Methylosinus trichosporium OB3b] Length = 365 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/336 (54%), Positives = 244/336 (72%), Gaps = 2/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+CR ++ +LV DKLTYAGNL+SL ++ +SF + DIC Sbjct: 1 MRVLVTGGAGFIGSAVCRRIIEATPHHLLVFDKLTYAGNLDSLAPVANDPRYSFRRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +A++EFQPD +++ AAESHVDRSI G FI TN++GTF +L+ +W L Sbjct: 61 DRGAVAAAMQEFQPDIVMHLAAESHVDRSIDGPAAFIHTNVVGTFTMLDAALEYWRGLDS 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRFL ISTDEV+G+L GLF ED PY+P+SPYSA+KA SD+L AW TYG+P Sbjct: 121 ERAAAFRFLHISTDEVFGALGATGLFREDTPYSPNSPYSASKAGSDHLARAWRETYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YG G+NVRDWLYV+DH AL LV + Sbjct: 181 IVTNCSNNYGPYHFPEKLIPLMILNALDGRPLPVYGRGENVRDWLYVDDHAAALLLVATR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDS 298 G +GE YNIGG +E +NID+V I +LD + P++ + +LI ++ DRPGHD RYAID Sbjct: 241 GAVGETYNIGGRSEMRNIDVVTTICDILDEIHPRAAGPYRQLISYVTDRPGHDLRYAIDC 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKI+ E+GW E E+G+ KTV WYLDN WW+ + Sbjct: 301 SKIERELGWRASETFETGIRKTVRWYLDNEDWWQAI 336 >gi|308388285|gb|ADO30605.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha710] gi|325131108|gb|EGC53829.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis OX99.30304] gi|325137131|gb|EGC59726.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M0579] gi|325201250|gb|ADY96704.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240149] gi|325207109|gb|ADZ02561.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis NZ-05/33] Length = 355 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESGL+KTV WYLDN WW+ Sbjct: 303 IDTAKISRELGWKPQETFESGLHKTVQWYLDNKTWWQ 339 >gi|325129125|gb|EGC51973.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis N1568] Length = 360 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 247/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F+ DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICDLLEELVPEKPAGVARYEDLITFVPDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|29725984|gb|AAO88917.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKVLPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELVPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHHREWW 337 >gi|262404977|ref|ZP_06081529.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. RC586] gi|262348816|gb|EEY97957.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. RC586] Length = 354 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F +VD+C Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFERVDVC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +W+ L Sbjct: 61 DRFELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWNHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDELFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVNTLCALLEELMPNKPAGVAHYADLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N+ WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLHNHEWW 337 >gi|161869082|ref|YP_001598248.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442] gi|161869097|ref|YP_001598263.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442] gi|161594635|gb|ABX72295.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442] gi|161594650|gb|ABX72310.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis 053442] Length = 355 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESGL KTV WYLDN WW+ Sbjct: 303 IDAAKISRELGWKPQETFESGLRKTVQWYLDNKTWWQ 339 >gi|319427036|gb|ADV55110.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] Length = 352 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/343 (54%), Positives = 246/343 (71%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N + V+ +DKLTYAGNL SL ++ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINKTQDCVINVDKLTYAGNLESLVSVAASERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +W L Sbjct: 61 DRAELDRVFSQHRPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEAARHYWMKLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-------------DKGLFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+L Sbjct: 121 ERKVAFRFHHISTDEVYGDLPHPDEQEGQVVKQELPLFTETTAYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P +++NCSNNYGP+HFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPTIVTNCSNNYGPFHFPEKLIPLVIINALEGKPLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY+V+ +G+IGE YNIGG+NE++N+++V I +LD+L+PK+ + E I ++ DR Sbjct: 241 DHARALYIVVTEGKIGETYNIGGHNEKQNLEVVQTICRILDSLVPKATPYAEQITYVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 GHDRRYAID+SK+ E+ W PQE E+GL KTV WYL N W Sbjct: 301 LGHDRRYAIDASKMSRELNWQPQETFETGLRKTVEWYLANQEW 343 >gi|146293636|ref|YP_001184060.1| dTDP-glucose 4,6 dehydratase [Shewanella putrefaciens CN-32] gi|145565326|gb|ABP76261.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens CN-32] Length = 359 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/343 (53%), Positives = 245/343 (71%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ + ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTPDSVVNVDKLTYAGNLESLSSVASNARYTFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + QPD +++ AAESHVDRSI G +FI TNI+GT+ LLE R +W L Sbjct: 61 DRAQLDRVFLLHQPDVVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEAARNYWMQLDT 120 Query: 121 DKKDQFRFLQISTDEVYGSL-------------DKGLFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+L Sbjct: 121 ERKLAFRFHHISTDEVYGDLPHPDEQEGQVVNQELPLFTETTPYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G++GE YNIGG+NE++N+++V I +LD+L+PK+ + E I ++ DR Sbjct: 241 DHARALYKVVTEGKVGETYNIGGHNEKQNLEVVQTICRILDSLVPKATPYAEQITYVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+SK+ +E+ W PQE E+GL KTV WYL N W Sbjct: 301 PGHDRRYAIDASKMSAELDWQPQETFETGLRKTVEWYLANQEW 343 >gi|262374521|ref|ZP_06067795.1| dTDP-glucose 4,6-dehydratase [Acinetobacter junii SH205] gi|262310517|gb|EEY91607.1| dTDP-glucose 4,6-dehydratase [Acinetobacter junii SH205] Length = 361 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/336 (56%), Positives = 239/336 (71%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGSA+ RYL+ + + VL +DKLTYAGNL SL I + + F Q DIC Sbjct: 1 MKFLVTGGAGFIGSAVVRYLIEETEHIVLNVDKLTYAGNLESLNSIESNPRYQFSQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + FQPD +++ AAESHVDRSI G+ FI TNI+GT+ +LE R +W+ L+ Sbjct: 61 VRADLDQLFAGFQPDVVMHLAAESHVDRSITGSAAFIETNILGTYQMLEAARHYWNGLNA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 QSKQAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+L+NCSNNYGPYHFPEKLIPL I ++G + +YG+G +RDWLYVEDH RALY V+ Sbjct: 181 VVLTNCSNNYGPYHFPEKLIPLTILNALQGKPLPVYGNGHQIRDWLYVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 + +GE YNIGG+NE+KNID+V I LL+ L P + +LI F+ DRPGHD RY Sbjct: 241 EANVGETYNIGGHNEQKNIDVVKSICALLEELAPNKPEGLSRYEDLITFVTDRPGHDHRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KIK ++GW PQE+ E+GL KTV WYL N W Sbjct: 301 AIDATKIKQDLGWVPQESFETGLRKTVEWYLANTQW 336 >gi|261823423|ref|YP_003261529.1| dTDP-glucose 4,6-dehydratase [Pectobacterium wasabiae WPP163] gi|261607436|gb|ACX89922.1| dTDP-glucose 4,6-dehydratase [Pectobacterium wasabiae WPP163] Length = 355 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/339 (55%), Positives = 244/339 (71%), Gaps = 6/339 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSAL RY++ + + V+V+DKLTYAGNL+SL +++S F+F +VDICD Sbjct: 3 RILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVAESERFAFERVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +QP +++ AAESHVDRSI G FI TNI+GT+ +LE R +W L+ Sbjct: 63 RAELDRVFAAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G L LF+E Y PSSPYSA+KASSD+LV AW TYG P Sbjct: 123 DKGVFRFHHISTDEVFGDLHGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTYGFPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 VITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NERKNI++V I LL+ L P + + +LI +++DRPGHD RYA Sbjct: 243 GEIGETYNIGGHNERKNIEVVQTICELLEELAPNKPAGVAHYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KI+ E+GW P+E E+G+ KTV WYL+N WWR + Sbjct: 303 IDAGKIERELGWRPEETFETGMKKTVSWYLNNEKWWRSV 341 >gi|254229475|ref|ZP_04922890.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. Ex25] gi|262392582|ref|YP_003284436.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. Ex25] gi|151938046|gb|EDN56889.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. Ex25] gi|262336176|gb|ACY49971.1| dTDP-glucose 4,6-dehydratase [Vibrio sp. Ex25] Length = 355 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL ++S+S + F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRDTQDTVINLDKLTYAGNLESLVDVSESERYYFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TN++GT+ LLE R +WS L + Sbjct: 63 RTELDRVFSEHQPDMVMHLAAESHVDRSIDGPAAFIETNVMGTYHLLEAARQYWSNLDEA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 RQSAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVNE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P S+ L+ +++DRPGHD RYA Sbjct: 243 GEVGETYNIGGHNEKANIEVVKTICALLEELRPDKPAGVESYESLVTYVKDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW P+E ESG+ KTV WYL+N WW+ Sbjct: 303 IDATKIAQELGWTPEETFESGIRKTVGWYLNNPQWWQ 339 >gi|325131122|gb|EGC53843.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis OX99.30304] gi|325137145|gb|EGC59740.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M0579] gi|325201264|gb|ADY96718.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240149] gi|325207123|gb|ADZ02575.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis NZ-05/33] Length = 358 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/335 (55%), Positives = 245/335 (73%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLKSLTEVADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNIIGTF LLE R + + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIIGTFNLLEAARAYRRQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAI 296 IGE YNIGG+NE+ NI++V I LL+ L+P + +LI +++DRPGHD RYAI Sbjct: 249 EIGETYNIGGHNEKANIEVVRTICALLEELVPNKPQGVARYEDLITYVKDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 309 DAAKIGRELGWQPQETFESGIRKTVEWYLNNQTWW 343 >gi|329297885|ref|ZP_08255221.1| dTDP-glucose 4,6-dehydratase [Plautia stali symbiont] Length = 358 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/340 (55%), Positives = 245/340 (72%), Gaps = 7/340 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGSAL R+L+ + V+V+DKL+YAGNL SL + Q F+F QVDICD Sbjct: 3 QFLVTGGAGFIGSALVRFLIANTDHWVVVVDKLSYAGNLVSLAPVEQDARFAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L ++QPD I++ AAESHVDRSI F+ TNI+GT+ LLE TR +W+ ++ + Sbjct: 63 RAALDRVLAQYQPDCIMHLAAESHVDRSIDWPIAFVETNIVGTYQLLEATRHYWNGMTDE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F ISTDEV+G L + F+E PY PSSPYSATKASSD+LV AW TYG+PV Sbjct: 123 RKKGFILHHISTDEVFGDLHGTEDFFTETTPYAPSSPYSATKASSDHLVRAWLRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YG+G +RDWLYVEDH RALY V+ Sbjct: 183 VVTNCSNNYGPYHFPEKLIPLTIINALAGKPLPVYGNGSQIRDWLYVEDHARALYTVVSS 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-----SHTELIRFIEDRPGHDRRY 294 G++GE YNIGG+NER+NI++V + LLD L P+ S+ ELI F+ DRPGHD RY Sbjct: 243 GKVGETYNIGGHNERRNIEVVETLCDLLDELAPQQRAAGLSSYRELITFVHDRPGHDLRY 302 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID+SKI E+GW PQE +SG+ +TV WYL N WW+ + Sbjct: 303 AIDASKIARELGWTPQETFDSGIRETVQWYLANPQWWQAI 342 >gi|119384853|ref|YP_915909.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] gi|119374620|gb|ABL70213.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] Length = 345 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/335 (57%), Positives = 241/335 (71%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V +V+ +D LTYA NL ++ +S S L++F Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGH-RVVNLDSLTYAANLENVASVSGSPLYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L E +PDAI++ AAESHVDRSI G FI TN+ GT+ LLE R WW+ +Q Sbjct: 60 DRAALDRILAEHRPDAIMHLAAESHVDRSIDGPGAFIETNVTGTYNLLEAARAWWT--AQ 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEV+GSL + G F+ED PY+P SPYSA+KA+SD+LV AW TYG+PV Sbjct: 118 GRPEGFRFHHISTDEVFGSLGETGQFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKL+P+ I + G + +YGDG NVRDWLYVEDH AL LVL+K Sbjct: 178 VLTNCSNNYGPFHFPEKLVPVVILNALHGRPIPVYGDGGNVRDWLYVEDHADALLLVLEK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIG YNIGG NE +NID+V I +D L P + H LI F+ DRPGHDRRYAID Sbjct: 238 GRIGRSYNIGGENEARNIDLVRTICGHMDRLRPNAAPHDRLITFVTDRPGHDRRYAIDPG 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++SE+GW P +E GL +TV WYL N WWRPL Sbjct: 298 RVRSELGWRPSVTVEEGLRRTVEWYLANEDWWRPL 332 >gi|91226572|ref|ZP_01261296.1| dTDP-D-glucose 4;6-dehydratase [Vibrio alginolyticus 12G01] gi|91189046|gb|EAS75328.1| dTDP-D-glucose 4;6-dehydratase [Vibrio alginolyticus 12G01] Length = 354 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/338 (55%), Positives = 245/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL ++S+S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIRDTQDTVINLDKLTYAGNLESLVDVSESERYYFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TN++GT+ LLE R +WS L + Sbjct: 61 DRAELDRVFSEHQPDMVMHLAAESHVDRSIDGPAAFIETNVMGTYHLLEAARQYWSGLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARQSAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVN 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L P S+ LI +++DRPGHD RY Sbjct: 241 EGEVGETYNIGGHNEKANIEVVKTICALLEELRPDKPAGVESYESLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+ W P+E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDATKIAQELNWTPEETFESGIRKTVEWYLNNPQWWQ 338 >gi|325138768|gb|EGC61320.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ES14902] Length = 360 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 246/336 (73%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+K SSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKVSSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 344 >gi|89056334|ref|YP_511785.1| dTDP-glucose 4,6-dehydratase [Jannaschia sp. CCS1] gi|88865883|gb|ABD56760.1| dTDP-glucose 4,6-dehydratase [Jannaschia sp. CCS1] Length = 346 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 244/337 (72%), Gaps = 4/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R V +V+ +D LTYA L+++ ++ SNL++F + DIC Sbjct: 1 MKILITGGAGFIGSAVVRLAVARGH-EVINLDALTYAACLDNVAPVASSNLYTFEKADIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + L PDAI++ AAESHVDRSI G FI TNI GT+ LLE R +W + Sbjct: 60 DREAMDTILSRHTPDAILHLAAESHVDRSIDGPGAFIQTNITGTYTLLEAARTYWE--AN 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D FRF +STDEV+G+L D GLF+ED PY P+SPYSA+KA+SD++V AW TYG+PV Sbjct: 118 GRPDGFRFHHVSTDEVFGTLGDTGLFTEDSPYAPNSPYSASKAASDHMVRAWAETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGPYHFPEKLIP+ I + + G + +YGDG+N+RDWLYVEDH AL VL+K Sbjct: 178 VLTNCSNNYGPYHFPEKLIPVVILKALAGETIPVYGDGKNIRDWLYVEDHADALLCVLEK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG+NER NID+V I LLD P+S H LI F+ DRPGHD RYAID++ Sbjct: 238 GELGRSYNIGGHNERTNIDLVRTICGLLDERRPESAPHDRLIEFVTDRPGHDMRYAIDAT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +I+ E+GW P +E GL KTV W+L N WWR L + Sbjct: 298 RIQEELGWTPSVTVEEGLAKTVDWFLANEDWWRALQQ 334 >gi|322513558|ref|ZP_08066658.1| dTDP-glucose 4,6-dehydratase [Actinobacillus ureae ATCC 25976] gi|322120629|gb|EFX92523.1| dTDP-glucose 4,6-dehydratase [Actinobacillus ureae ATCC 25976] Length = 357 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/338 (57%), Positives = 246/338 (72%), Gaps = 6/338 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TGGAGFIGSA+ R+++N + V+ IDKLTYAGNL SL+ +S+S+ + F QVDICD Sbjct: 4 IFITGGAGFIGSAVIRHIINYTQDVVVNIDKLTYAGNLASLEGVSKSSRYHFEQVDICDS 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I ++QPD +++ AAESHVDRSI G FI TN+IGT+ LLE R +W+ LS K Sbjct: 64 GRISQLFCKYQPDTVMHLAAESHVDRSIDGPSAFIQTNVIGTYTLLEAARSYWNGLSAAK 123 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L + LF+E PY PSSPYSA+KA+SD+LV AW TYG+P+L Sbjct: 124 KAAFRFHHISTDEVYGDLHGMEELFTEQTPYAPSSPYSASKAASDHLVRAWFRTYGLPIL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I +EG + +YGDG VRDWL+VEDH RALY V+ +G Sbjct: 184 VTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGDGLQVRDWLFVEDHARALYKVVCEG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYAI 296 ++GE YNIGG+NE+ NI +V I LL+ +P + E LI ++ DRPGHD RYAI Sbjct: 244 KVGETYNIGGHNEKTNIKVVRAICQLLEEFVPNKPNAIEKYEDLITYVTDRPGHDVRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI +E+GW PQE ESGL KTV WYL + WW+ + Sbjct: 304 DASKIANELGWQPQETFESGLRKTVQWYLTHRDWWQAI 341 >gi|295691454|ref|YP_003595147.1| dTDP-glucose 4,6-dehydratase [Caulobacter segnis ATCC 21756] gi|295433357|gb|ADG12529.1| dTDP-glucose 4,6-dehydratase [Caulobacter segnis ATCC 21756] Length = 355 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/336 (54%), Positives = 241/336 (71%), Gaps = 2/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGG+GFIGSA+CR+L + +L DKLTYA + SL + + F+Q D+ Sbjct: 6 LRVMVTGGSGFIGSAVCRHLAGQNDVAILNFDKLTYAASPASLAMLEGKADYQFVQGDVA 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + A++ F+P+ I++ AAESHVDRSI G EFI TNI+GT+++L+ W L Sbjct: 66 NAEAVSRAIQAFRPNVIMHLAAESHVDRSITGPGEFIQTNIVGTYVMLQAALEHWRALEG 125 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+ FRF ISTDEV+GSL +GLFSE PY+P SPYSA+KASSD+L AW HTYG+PV Sbjct: 126 AEKEAFRFHHISTDEVFGSLGPEGLFSETTPYDPRSPYSASKASSDHLARAWHHTYGLPV 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL +EG + +YG G NVRDWL+VEDH RAL+L+ + Sbjct: 186 VVSNCSNNYGPYHFPEKLIPLVTLNALEGKPLPVYGKGDNVRDWLHVEDHARALHLIATR 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN+GG NER N+ +V I +LD L P + + ELI F+ DRPGHD RYAID+ Sbjct: 246 GVPGESYNVGGRNERTNLQVVEAICDVLDELRPLQGRTRRELITFVADRPGHDARYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW QE E+GL KTV WYLDN WW PL Sbjct: 306 TKLEAELGWKAQETFETGLRKTVQWYLDNEAWWAPL 341 >gi|307544986|ref|YP_003897465.1| dTDP-glucose 4,6-dehydratase [Halomonas elongata DSM 2581] gi|307217010|emb|CBV42280.1| dTDP-glucose 4,6-dehydratase [Halomonas elongata DSM 2581] Length = 353 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 243/337 (72%), Gaps = 5/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGSA+ R L+N+ +V+ +DKLTYAGNL SL +S + ++F+Q DIC Sbjct: 1 MKFLVTGGAGFIGSAVVRELINETDHEVVNVDKLTYAGNLESLDSVSNNIRYNFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I ++ QPD +++ AAESHVDRSI G EF+ TN++GT +LLE R +W L + Sbjct: 61 DAPAINKLFEKHQPDVVMHLAAESHVDRSIDGPAEFVQTNVVGTTVLLEAARNYWKELKK 120 Query: 121 ---DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K FRF +STDEVYG LD K LF+ED PY PSSPYSA+KA SD+LV +W T+ Sbjct: 121 SDPEKARGFRFHHVSTDEVYGDLDETKALFTEDTPYAPSSPYSASKAGSDHLVRSWYRTF 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P L++NCSNNYGPYHFPEKLIPL I + G + +YGDG+ VRDWLYVEDH RAL Sbjct: 181 GMPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGDGKQVRDWLYVEDHARALVK 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +G +GE YNIGG+NE+ N+++V + LL L+P + +LI F+ DRPGHD RYA Sbjct: 241 VAVEGEVGETYNIGGHNEKTNLEVVETLCSLLQELVPNDNLYRDLITFVTDRPGHDLRYA 300 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW P+E E+GL KTV WYL+N WW+ Sbjct: 301 IDAGKIERELGWTPRETFETGLRKTVYWYLENTDWWK 337 >gi|292492255|ref|YP_003527694.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus halophilus Nc4] gi|291580850|gb|ADE15307.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus halophilus Nc4] Length = 358 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/331 (57%), Positives = 242/331 (73%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAGFIGSA+ R+ + + +V+ +DKLTYAGNL SL+ I+ + F+ DICD Sbjct: 6 LLITGGAGFIGSAVVRHFIENTDQRVINVDKLTYAGNLESLESIAFHPRYEFVHADICDG 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++P A+++ AAESHVDRSI +FI TNI GT+ LLE +W L + Sbjct: 66 GAMAQLFAQYRPHAVLHLAAESHVDRSIDSPVDFINTNITGTYTLLETALDYWRKLDKSA 125 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + QFRF ISTDEV+GSL + GLF ED PY P+SPY+A+KA+SD+LV AW HTYG+PVL+ Sbjct: 126 QAQFRFHHISTDEVFGSLGETGLFHEDSPYQPNSPYAASKAASDHLVRAWHHTYGLPVLI 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPY FPEKLIPL + IEG + +YG G NVRDWLYVEDHVRAL +VL +G+ Sbjct: 186 TNCSNNYGPYQFPEKLIPLMVLNGIEGKPLPVYGAGDNVRDWLYVEDHVRALQIVLTEGQ 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG+NE+ NI++V I LLD L+P+S H LI F+ DRPGHDRRYAID+ Sbjct: 246 PGETYNIGGHNEQTNIEVVELICQLLDELLPESPHRPHRSLITFVSDRPGHDRRYAIDAG 305 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI SE+GW PQE E+GL KT+ WYLDN W Sbjct: 306 KIASELGWRPQETFETGLRKTLQWYLDNQKW 336 >gi|310766118|gb|ADP11068.1| DTDP-glucose 4,6-dehydratase [Erwinia sp. Ejp617] Length = 355 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 246/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ +VLV+DKL+YAGNL SL ++ + F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHILSSTPDRVLVLDKLSYAGNLASLAPVADNPRFAFSKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + A+ FQP I++ AAESHVDRSI G F+ TN++GT+++LE R +W L Sbjct: 63 RVALDGAIAAFQPQLIMHLAAESHVDRSIDGPLPFVETNVVGTYMMLEAARHYWISLPAP 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F F ISTDEV+G L D F+E PY PSSPYSATKASSD+LV AW TYG+PV Sbjct: 123 EKANFVFHHISTDEVFGDLENDTDFFTETTPYAPSSPYSATKASSDHLVRAWHRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH RALY V+ Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVDDHARALYQVVTA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G++GE YNIGG++ER+NID+V + LL+ L P+ + + +LI + DRPGHDRRYA Sbjct: 243 GKVGETYNIGGHSERRNIDVVETLCALLEELAPEKPAGLGHYRDLITRVADRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV W+++N WW+ Sbjct: 303 IDAGKIERELGWRPQETFESGMRKTVSWFINNPAWWQ 339 >gi|114799940|ref|YP_759518.1| dTDP-glucose 4,6-dehydratase [Hyphomonas neptunium ATCC 15444] gi|114740114|gb|ABI78239.1| dTDP-glucose 4,6-dehydratase [Hyphomonas neptunium ATCC 15444] Length = 365 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/339 (54%), Positives = 247/339 (72%), Gaps = 1/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGSAL R+L++ +V V+DKLTYA NL+SL +S S ++F++ DIC Sbjct: 8 VKVLVTGGAGFIGSALVRHLIDTTHARVTVVDKLTYAANLDSLAPVSASPRYTFIREDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +R +PD +++ AAE+HVDRSI G+ +FI TNI GT+ LLE R + S Sbjct: 68 NAPAMRDIFLAERPDYVLHLAAETHVDRSISGSQQFIQTNINGTYNLLEAARALQAERSG 127 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + +FRFL +STDEVYGSL GLFSE Y+PSSPYSA+KA+SD+L AW TYG+PV Sbjct: 128 DLRSRFRFLHVSTDEVYGSLGPDGLFSETTAYDPSSPYSASKAASDHLAKAWHRTYGLPV 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL I +EG + +YGDG N+RDWL+VEDH RAL+ + Sbjct: 188 IVSNCSNNYGPYHFPEKLIPLIILNALEGQRLPVYGDGSNIRDWLHVEDHARALWRIATT 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YN+GG NER N+ +V I LLD L P + ELI F+ DRPGHD+RYAID++ Sbjct: 248 GRPGETYNVGGLNERTNLQVVHTICDLLDELRPANRPRRELIEFVSDRPGHDQRYAIDAA 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 K+++E+GW +E ++G+ KTV WY+D+ WW PL K + Sbjct: 308 KLQTELGWKAEETFDTGIRKTVEWYIDHPEWWGPLRKSV 346 >gi|319784646|ref|YP_004144122.1| dTDP-glucose 4,6-dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170534|gb|ADV14072.1| dTDP-glucose 4,6-dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 356 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/341 (55%), Positives = 243/341 (71%), Gaps = 4/341 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIGSA+CR+L + +V +DKLTYAGNL SL+ I ++ + F Q DIC Sbjct: 1 MNFLVTGGAGFIGSAVCRHLCANPAYRVTNLDKLTYAGNLASLRPIENAHNYRFAQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L+ D ++N AAESHVDRSI G FI TNI+GT+ +L +W L + Sbjct: 61 DERAVLDILRRDDIDIVMNLAAESHVDRSIDGPGTFIETNIVGTYKMLNAALEYWRGLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+K FRF +STDEV+G L D G+F E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 DRKSHFRFHHVSTDEVFGDLPFDGGMFVEETPYAPSSPYSASKAASDHLVRAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+LSNCSNNYGPYHFPEKLIPL I ++ + +YG G NVRDWL+VEDH RAL LV Sbjct: 181 VVLSNCSNNYGPYHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLFVEDHARALELVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 +G GE YN+GGN+ER N+ +V I LLD+ P++ S+ +LI F+ DRPGHDRRYAI Sbjct: 241 RGLSGESYNVGGNSERTNLGVVETICDLLDSRRPRAGGKSYRDLISFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D+SKI ++GW P EN +SGL KTV W+LDN WWW P+ ++ Sbjct: 301 DASKIGRDLGWTPNENFDSGLAKTVDWFLDNKWWWGPIREQ 341 >gi|188532358|ref|YP_001906155.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] gi|188027400|emb|CAO95247.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] Length = 355 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ + +VLV+DKL+YAGNL SL ++ + F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHILSSTQDRVLVLDKLSYAGNLASLDPVADNPRFTFKKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + + FQP I++ AAESHVDRSI G F+ TNI+GT+++LE R +W+ L Sbjct: 63 RAALDAEVAAFQPQLIMHLAAESHVDRSIDGPLAFVETNIVGTYMMLESARHYWASLPAP 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F F ISTDEV+G L D F+E PY PSSPYSATKASSD+LV AW TYG+PV Sbjct: 123 EKSAFIFHHISTDEVFGDLENDTDFFTETTPYAPSSPYSATKASSDHLVRAWYRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH RALY V+ Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVDDHARALYQVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G+ GE YNIGG+NER+NID++ + LL+ L P+ + +LI + DRPGHDRRYA Sbjct: 243 GKAGETYNIGGHNERRNIDVIETLCALLEELAPQKPRGLLYYRDLITRVTDRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV W++ N WW+ Sbjct: 303 IDAGKIERELGWRPQETFESGMRKTVSWFIHNPAWWQ 339 >gi|260774439|ref|ZP_05883353.1| dTDP-glucose 4,6-dehydratase [Vibrio metschnikovii CIP 69.14] gi|260610566|gb|EEX35771.1| dTDP-glucose 4,6-dehydratase [Vibrio metschnikovii CIP 69.14] Length = 380 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/363 (51%), Positives = 249/363 (68%), Gaps = 33/363 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL I+ S ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIQNTQDSVVNLDKLTYAGNLESLALIADSERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE TR +W+ L + Sbjct: 61 NRAELDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEATRSYWNRLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK---------------------------------GLFSE 147 + K FRF ISTDEVYG L LF+E Sbjct: 121 EHKAAFRFHHISTDEVYGDLPHPDEVENNDECLMVNGELTQDNSTLSINNSLPHLPLFTE 180 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 Y PSSPYSA+KASSD+LV AW TYG+P +++NCSNNYGPYHFPEKLIPL I +E Sbjct: 181 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE 240 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YG G +RDWL+VEDH RALY V+ +G++GE YNIGG+NE++N+++V I +L Sbjct: 241 GKDLPIYGKGDQIRDWLFVEDHARALYKVVTEGKVGETYNIGGHNEKQNLEVVQAICSIL 300 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D L+PK+ + E I +++DRPGHDRRYAID+SK+++E+GW P E E+GL KTV WYLDN Sbjct: 301 DTLVPKARPYAEQITYVQDRPGHDRRYAIDASKMQNELGWTPLETFETGLLKTVQWYLDN 360 Query: 328 NWW 330 W Sbjct: 361 QQW 363 >gi|160876139|ref|YP_001555455.1| dTDP-glucose 4,6 dehydratase [Shewanella baltica OS195] gi|160861661|gb|ABX50195.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS195] gi|315268335|gb|ADT95188.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS678] Length = 359 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/343 (54%), Positives = 246/343 (71%), Gaps = 13/343 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ + ++F +VDIC Sbjct: 1 MKVLVTGGAGFIGSAVVRHIICNTQDSVINVDKLTYAGNLESLTSVADNARYTFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++QPDAI++ AAESHVDRSI G +FI TNIIGT+ LLE R +W L Sbjct: 61 DRGELDRIFLQYQPDAIMHLAAESHVDRSITGPSDFIQTNIIGTYTLLEAARHYWIQLDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL-------------DKGLFSEDMPYNPSSPYSATKASSDYL 167 ++K FRF ISTDEVYG L + LF+E PY PSSPYSA+KASSD+L Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEHEGQVVNQELPLFTETTPYAPSSPYSASKASSDHL 180 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVE Sbjct: 181 VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 240 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH RALY V+ +G++GE YNIGG+NE++N+++V I +LD L+PK + E I ++ DR Sbjct: 241 DHARALYKVVTEGKVGETYNIGGHNEKRNLEVVQTICSILDVLMPKGTPYAEQITYVTDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 GHDRRYAID+SK+ +E+ W PQE E+GL KTV WYL N W Sbjct: 301 LGHDRRYAIDASKMSAELNWQPQETFETGLLKTVEWYLANQEW 343 >gi|328471767|gb|EGF42644.1| dTDP-glucose 4,6-dehydratase [Vibrio parahaemolyticus 10329] Length = 354 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/338 (55%), Positives = 244/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL +++ S+ + F QVDIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIRDTQDSVVNLDKLTYAGNLESLVDVADSDRYYFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPD +++ AAESHVDRSI G FI TN++GT+ LLE R +WS L + Sbjct: 61 DRTELDRVFSEHQPDMVMHLAAESHVDRSIDGPAAFIETNVMGTYHLLEAARQYWSSLEE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ANQSAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ L P S+ LI +++DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICALLEELRPDKPAGVESYESLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+ W P+E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDATKIAQELNWTPEETFESGIRKTVEWYLNNPQWWQ 338 >gi|24374701|ref|NP_718744.1| dTDP-glucose 4,6 dehydratase [Shewanella oneidensis MR-1] gi|24349353|gb|AAN56188.1|AE015756_9 dTDP-glucose 4,6-dehydratase [Shewanella oneidensis MR-1] Length = 375 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/358 (51%), Positives = 247/358 (68%), Gaps = 28/358 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL ++ S ++F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + QPDA+++ AAESHVDRSI G+ +FI TNI+GT+ LLE R +W L+ Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNT 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------------------------LFSEDMPYN 152 ++K FRF ISTDEVYG L LF+E PY Sbjct: 121 ERKSAFRFHHISTDEVYGDLPHPDEINVECSMLNDECKDHSTLNIQHSTLPLFTETTPYT 180 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF 212 PSSPYSA+KASSD+LV AW TYG P +++NCSNNYGPYHFPEKLIPL I +EG + Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG G +RDWLYVEDH RAL+ V+ +G++GE YNIGG+NE++N+++V I +LD+L+P Sbjct: 241 IYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSILDSLVP 300 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ + E I ++ DRPGHDRRYAID++K+ +E+ W PQE E+GL KTV WYL N W Sbjct: 301 KNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTVEWYLANQEW 358 >gi|292486663|ref|YP_003529533.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] gi|292897900|ref|YP_003537269.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora ATCC 49946] gi|291197748|emb|CBJ44843.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora ATCC 49946] gi|291552080|emb|CBA19117.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] gi|312170729|emb|CBX78991.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora ATCC BAA-2158] Length = 362 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/337 (54%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R++++ +VLV+DKL+YAGNL SL ++ + F+F + DICD Sbjct: 3 RILVTGGAGFIGSAVVRHILSSSSDRVLVLDKLSYAGNLASLAPVADNPRFTFSKTDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + A+ FQP I++ AAESHVDRSI G F+ TN++GT ++LE R +W L Sbjct: 63 RAALDGAIAAFQPQLIMHLAAESHVDRSIDGPRAFVETNVVGTCMMLEAARHYWLSLPAP 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F F ISTDEV+G L D F+E PY PSSPYSATKASSD+LV AW TYG+PV Sbjct: 123 EKSTFVFHHISTDEVFGDLANDTDFFTETTPYAPSSPYSATKASSDHLVRAWHRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH RALY V+ Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVDDHARALYQVVTA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 GR+GE YNIGG+N+R+NID+V + LL+ L P+ + + +LI + DRPGHDRRYA Sbjct: 243 GRVGETYNIGGHNQRRNIDVVETLCALLEELAPEKPAGLRHYRDLITRVADRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV W++++ WW+ Sbjct: 303 IDAGKIERELGWRPQETFESGMRKTVSWFINHPAWWQ 339 >gi|262163805|ref|ZP_06031545.1| dTDP-glucose 4,6-dehydratase [Vibrio mimicus VM223] gi|262027785|gb|EEY46450.1| dTDP-glucose 4,6-dehydratase [Vibrio mimicus VM223] Length = 354 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ K V+ +DKLTYAGNL SL ++ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIILRTKDVVVNLDKLTYAGNLESLCDVDGHERYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + E QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Sbjct: 61 NREQLDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWNSLED 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E+ PY PSSPYSA+KASSD+LV +W TYG P Sbjct: 121 ERKLTFRFHHISTDEVYGDLEGTDDLFTEETPYAPSSPYSASKASSDHLVRSWLRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKALPVYGNGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V + LL+ L+P + +T+LI +++DRPGHD RY Sbjct: 241 EGQVGETYNIGGHNEKANIEVVETLCTLLEELVPNKPTGITYYTDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ ++GW P+E ESG+ KTV WYL + WW Sbjct: 301 AIDASKIERDLGWKPEETFESGIRKTVEWYLSHREWW 337 >gi|88800554|ref|ZP_01116116.1| dTDP-glucose 4,6-dehydratase [Reinekea sp. MED297] gi|88776699|gb|EAR07912.1| dTDP-glucose 4,6-dehydratase [Reinekea sp. MED297] Length = 353 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/331 (55%), Positives = 238/331 (71%), Gaps = 2/331 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGSA+ R L+ +V+ +DKLTYAGNL SL E+ S + F + DICD Sbjct: 7 LVTGGAGFIGSAVVRELIKQGNTKVVNVDKLTYAGNLESLTEVENSPNYVFEKADICDAT 66 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + ++QP A+++ AAESHVDRSI G EFI TNI+GT+ LLE R +WS L + ++ Sbjct: 67 AMAKLFSQYQPTAVMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEAARSYWSELPESQQ 126 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW T+G+P ++ Sbjct: 127 QAFRFHHISTDEVYGDLHGTNDLFTETTSYAPSSPYSASKASSDHLVRAWQRTFGLPTVV 186 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIPL I +EG + +YGDGQ +RDWL+VEDH RAL V+ +G Sbjct: 187 TNCSNNYGPYHFPEKLIPLVIINALEGKPLPVYGDGQQIRDWLFVEDHARALIKVVSEGE 246 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIGG+NE+ N+ +V I +LD L+P + ELI F++DRPGHD RYAID+SKI Sbjct: 247 VGETYNIGGHNEQTNLSVVEGICDILDELVPANTPRRELITFVKDRPGHDVRYAIDASKI 306 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E+GW P E ++GL KTV WYL+N WW+ Sbjct: 307 ERELGWTPAETFDTGLRKTVEWYLNNKDWWQ 337 >gi|308388298|gb|ADO30618.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis alpha710] Length = 358 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/335 (55%), Positives = 245/335 (73%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNIIGTF LLE R + + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIIGTFNLLEAARAYRRQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAI 296 IGE YNIGG+NE+ NI++V I LL+ L+P + +LI +++DRPGHD RYAI Sbjct: 249 EIGETYNIGGHNEKANIEVVRTICALLEELVPNKPQGVARYEDLITYVKDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 309 DAAKIGRELGWQPQETFESGIRKTVEWYLNNQTWW 343 >gi|323964035|gb|EGB59525.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M863] Length = 355 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|222087847|ref|YP_002546385.1| dTDP-glucose 4,6-dehydratase [Agrobacterium radiobacter K84] gi|221725295|gb|ACM28451.1| dTDP-glucose 4,6-dehydratase [Agrobacterium radiobacter K84] Length = 352 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/333 (56%), Positives = 244/333 (73%), Gaps = 3/333 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGSA+CRYL+++ V+ +D LTYAG+L SL I + FS +Q DI D Sbjct: 6 MVTGGAGFIGSAVCRYLIDETDYDVVNLDLLTYAGDLRSLDSIKSNPRFSTIQGDIGDSA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+ +P I++ AAESHVDRSI GA FI TNI+GTF LLE R +WS L ++ Sbjct: 66 LVGEILQRHRPSVILHLAAESHVDRSIDGAAPFIETNIVGTFRLLEAVRAYWSALPAAEQ 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +FRFL +STDEVYG+L D+GLFSE PY+P+SPYSA+KA+SD+LV AW HTYG+P+++S Sbjct: 126 TEFRFLHVSTDEVYGTLGDEGLFSETTPYSPNSPYSASKAASDHLVNAWHHTYGLPIVIS 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGP+ FPEKLIP IT +E + +YG G NVRDWL+V+DH AL+LV KGR+ Sbjct: 186 NCSNNYGPFQFPEKLIPRMITTALEHGSLPVYGAGNNVRDWLHVDDHASALWLVATKGRL 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSSK 300 GE+YNIGG NER+N+D+V I LLD L P + + LI ++ DR GHD RYAID++K Sbjct: 246 GEKYNIGGRNERRNVDVVRTICSLLDELGPPAPQGRYESLITYVTDRLGHDHRYAIDATK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 I++E+GW + + + GL T+ WYL N WWWRP Sbjct: 306 IETELGWKAKYDFDHGLRATILWYLSNEWWWRP 338 >gi|189092398|gb|ACD75799.1| dTDP-glucose 4,6 dehydratase [Escherichia coli] Length = 358 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/340 (54%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGSAL ++++++ VLV+DKLTYAGNL +L+ IS +N + F+ DIC Sbjct: 1 MKIIVTGGAGFIGSALVKFIIDNTADHVLVLDKLTYAGNLLNLESISDNNRYQFINCDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++PDAI++ AAESHVDRSI + FI TNIIGT+ LL ++ +W LS Sbjct: 61 DVVAVEKIFLDYKPDAIMHLAAESHVDRSISSSAVFIDTNIIGTYNLLNVSKEYWMQLSN 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK QFRF ISTDEVYG L LF+ED Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKTQFRFHHISTDEVYGDLPHPDEFESISKLPLFTEDCAYKPSSPYSASKASSDHLVNA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TY +P +++NCSNNYGP+ +PEKLIP++I ++G +F+YG G +RDWLYV DHV Sbjct: 181 WHRTYSLPTVITNCSNNYGPFQYPEKLIPMSIINALQGEDIFIYGKGDQIRDWLYVYDHV 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ALYLVL GR+G+ YNIGGNNE++NI++V I +LD + PK+ ++ + I+F+ DRPGH Sbjct: 241 EALYLVLTNGRVGQTYNIGGNNEKRNIEVVETICKILDEIKPKNGTYQDQIKFVNDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SKIK E+ W P+E+ +G+ KT+ WYL+N W Sbjct: 301 DRRYAIDASKIKKELNWIPKESFYTGIRKTIKWYLNNLDW 340 >gi|319424473|gb|ADV52547.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] Length = 363 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/347 (53%), Positives = 248/347 (71%), Gaps = 17/347 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL +++ ++F +VDIC Sbjct: 1 MKVLITGGAGFIGSAVVRHIIKNTTDSVINLDKLTYAGNLESLSSVAEDIRYNFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++QPD +++ AAESHVDRSI G +FI TNI+GT+ LLE +R +W L Sbjct: 61 DRTELGRVFNQYQPDVVMHLAAESHVDRSITGPSDFIQTNIVGTYTLLEASRQYWMELDV 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K +FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 ERKARFRFHHISTDEVYGDLPHPDEMGIGESLPLFTESTSYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+PV+++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WLRTYGLPVIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP---KSY----SHTELIRF 283 RALY V+ +G+IGE YNIGG NE++NI++V I ++D L+P + Y SH+ LI + Sbjct: 241 RALYKVVTEGKIGETYNIGGQNEKQNIEVVNSICAIMDELVPLHERGYPLNTSHSTLITY 300 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + DRPGHDRRYAID++K+ E+ W PQE E+GL KT+ WYL+N W Sbjct: 301 VTDRPGHDRRYAIDATKMSRELNWRPQETFETGLRKTIEWYLNNQEW 347 >gi|192288553|ref|YP_001989158.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris TIE-1] gi|192282302|gb|ACE98682.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/333 (56%), Positives = 237/333 (71%), Gaps = 3/333 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGSA+ R L+ +VLV+DKLTYAGNL+SL +S F F++ DI + Sbjct: 4 RFLVTGGAGFIGSAVVRRLIGTTPHEVLVVDKLTYAGNLDSLAPVSDDPRFRFVRADIVE 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R +EF PD +++ AAESHVDRSI G +FI TNI+GT+ LL+ W L Sbjct: 64 QGTMRLLFEEFSPDVVMHLAAESHVDRSIDGPGDFIQTNIVGTYSLLQAALAHWRSLPAA 123 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF ISTDEV+GSL +GLF ED PY P SPYSA+KA SD+LV AW HTYG+PV+ Sbjct: 124 RKSGFRFHHISTDEVFGSLGAEGLFREDTPYQPKSPYSASKAGSDHLVRAWHHTYGLPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPLAI + + G + +YG G NVRDWL+VEDH AL L ++G Sbjct: 184 ITNCSNNYGPYHFPEKLIPLAIIKALHGEAIPVYGTGANVRDWLHVEDHADALLLAAERG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 GE YNIGG NER N+++V I LLD L P + S +LI F+ DRPGHD RYAID+ Sbjct: 244 ENGESYNIGGRNERTNLEVVQAICRLLDELAPDAAIGSRAKLISFVADRPGHDARYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SK++ E+GW + N + GL +TV WYLDN WW Sbjct: 304 SKVERELGWRARYNFDDGLRQTVQWYLDNRTWW 336 >gi|260460164|ref|ZP_05808416.1| dTDP-glucose 4,6-dehydratase [Mesorhizobium opportunistum WSM2075] gi|259033809|gb|EEW35068.1| dTDP-glucose 4,6-dehydratase [Mesorhizobium opportunistum WSM2075] Length = 366 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/341 (55%), Positives = 242/341 (70%), Gaps = 4/341 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIGSA+CR+L + +V +DKLTYAGNL SL+ I ++ +SF DIC Sbjct: 11 MNFLVTGGAGFIGSAVCRHLCANPAYRVTNLDKLTYAGNLASLRPIENAHNYSFAHADIC 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L+ D ++N AAESHVDRSI G FI TNI+GT+ +L +W LS Sbjct: 71 DERAVLDILRRNDIDIVMNLAAESHVDRSIDGPGAFIETNIVGTYKILNAALEYWRGLSD 130 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K +FRF +STDEV+G L D G+F E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 131 ERKGRFRFHHVSTDEVFGDLPFDGGMFVEETPYAPSSPYSASKAASDHLVRAWHETYGLP 190 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+LSNCSNNYGPYHFPEKLIPL I ++ + +YG G NVRDWL+VEDH RAL LV Sbjct: 191 VVLSNCSNNYGPYHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLFVEDHARALELVAT 250 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 KG GE YN+GGN+ER N+ +V I LLD P++ + +LI F+ DRPGHDRRYAI Sbjct: 251 KGTPGESYNVGGNSERTNLAVVETICDLLDIRRPRADGKRYRDLIAFVTDRPGHDRRYAI 310 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D+SKI E+GW P EN +SGL +TV W+LDN WWW P+ ++ Sbjct: 311 DASKIGRELGWTPSENFDSGLARTVDWFLDNKWWWGPIREQ 351 >gi|323974371|gb|EGB69499.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TW10509] Length = 355 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARIFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|309378564|emb|CBX22836.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 355 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 244/336 (72%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWRQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPY+A+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYAASKASSDHLVRAWQRTYGLPAI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY ++ KG Sbjct: 189 VSNCSNNYGPRQFPEKLIPLTILNALSGKPLPVYGDGMQIRDWLFVEDHARALYQLVSKG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 GE YNIGG+NE+ N+++V I LL+ L P+ + + +LI F++DRPGHD RYAI Sbjct: 249 VAGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI E+GW PQE ESG+ KTV WYLDN WW+ Sbjct: 309 DAAKIGRELGWEPQETFESGIRKTVQWYLDNKTWWQ 344 >gi|217426237|gb|ACK44397.1| dTDP-glucose 4,6 dehydratase [Escherichia coli] Length = 358 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/340 (54%), Positives = 249/340 (73%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGSAL ++++++ VLV+DKLTYAGNL +L+ IS +N + F+ DIC Sbjct: 1 MKIIVTGGAGFIGSALVKFIIDNTADHVLVLDKLTYAGNLLNLESISDNNRYQFINCDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++PDAI++ AAESHVDRSI + FI TNIIGT+ LL ++ +W LS Sbjct: 61 DVVAVEKIFLDYKPDAIMHLAAESHVDRSISSSAVFIDTNIIGTYNLLNVSKEYWMQLSN 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK QFRF ISTDEVYG L LF+ED Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKTQFRFHHISTDEVYGDLPHPDEFESISKLPLFTEDCAYKPSSPYSASKASSDHLVNA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TY +P +++NCSNNYGP+ +PEKLIP++I ++G +F+YG G +RDWLYV DHV Sbjct: 181 WHRTYSLPTVITNCSNNYGPFQYPEKLIPMSIINALQGEDIFIYGKGDQIRDWLYVYDHV 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ALYLVL GR+G+ YNIGGNNE++N+++V I +LD + PK+ ++ + I+F+ DRPGH Sbjct: 241 EALYLVLTNGRVGQTYNIGGNNEKRNVEVVETICKILDEIKPKNGTYQDQIKFVNDRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+SKIK E+ W P+E+ +G+ KT+ WYL+N W Sbjct: 301 DRRYAIDASKIKRELNWIPKESFYTGIRKTIKWYLNNLDW 340 >gi|1098478|gb|AAC37049.1| dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis] Length = 355 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 247/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QYEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYG YHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGLYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D++KI+ ++GW P E ESGL KTV WYLDN WW+ Sbjct: 303 VDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQ 339 >gi|33151864|ref|NP_873217.1| dTDP-D-glucose 4,6-dehydratase [Haemophilus ducreyi 35000HP] gi|4741795|gb|AAD28704.1|AF101047_5 putative dTDP-D-glucose 4,6-dehydratase [Haemophilus ducreyi] gi|33148085|gb|AAP95606.1| dTDP-D-glucose 4,6-dehydratase [Haemophilus ducreyi 35000HP] Length = 346 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 192/340 (56%), Positives = 240/340 (70%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGSA+ RY++N +V+ +DKLTYAGNL SL +SQ ++F QVDI Sbjct: 1 MKLLITGGAGFIGSAVIRYIINHTDDEVINVDKLTYAGNLASLSSVSQHKRYTFEQVDIN 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +QPD +++ AAESHVDRSI G+ FI TNIIGT+ LLE R +W L Q Sbjct: 61 DSGRIAEIFYHYQPDKVMHLAAESHVDRSIEGSAPFIQTNIIGTYTLLETARSYWQSLDQ 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK QF F ISTDEV+G L F+E Y PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 QKKAQFLFHHISTDEVFGDLAHQPQRFTEQSAYMPSSPYSASKAASDHLVQAWYRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++S+CSNNYGPYHFPEKLIPL I + G + +YGDG VRDWL+VEDH RALY V+K Sbjct: 181 TVISHCSNNYGPYHFPEKLIPLTILNALSGKPLPVYGDGLQVRDWLFVEDHARALYKVIK 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFIEDRPGHDR 292 +GR+GE YNIG +NER NI++V I LLD L+P K+Y LI + DRPGHD Sbjct: 241 QGRVGESYNIGASNERTNIEVVQAICQLLDELVPVKPNGIKTYQ--ALITHVADRPGHDL 298 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RYAID+SKI ++GW PQE+ +GL KTV WYL + WW+ Sbjct: 299 RYAIDASKITQQLGWQPQESFATGLRKTVEWYLAHKNWWQ 338 >gi|218550988|ref|YP_002384779.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii ATCC 35469] gi|218358529|emb|CAQ91176.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii ATCC 35469] Length = 355 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/337 (58%), Positives = 248/337 (73%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI E+GW PQE ESG+ KTV WYL N WW+ Sbjct: 303 IDAAKIARELGWLPQETFESGMRKTVQWYLANESWWK 339 >gi|220935274|ref|YP_002514173.1| dTDP-glucose 4,6-dehydratase [Thioalkalivibrio sp. HL-EbGR7] gi|219996584|gb|ACL73186.1| dTDP-glucose 4,6-dehydratase [Thioalkalivibrio sp. HL-EbGR7] Length = 350 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/333 (54%), Positives = 251/333 (75%), Gaps = 3/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAGFIGSA+ R+L+++ +V+ +D+LTYAGNL+S+ E+S S+ ++F QVDI DR Sbjct: 5 LLITGGAGFIGSAVVRHLIHNTDYRVVNLDRLTYAGNLDSVAEVSNSSRYAFEQVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +E +P +++ AAESHVDRSI G +FI TNI+GT+ LLE +R +W+ L Sbjct: 65 RELDRVFREHRPAGVMHLAAESHVDRSIEGPADFIDTNIVGTYTLLEASRAYWNELEGQS 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K FR+ ISTDEVYGSL + GLF+E+ PY P+SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 125 KADFRYHHISTDEVYGSLGETGLFTEETPYAPNSPYSASKAASDHLVRAWHHTYGLPVVT 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGPY FPEKLIP I ++G + +YGDG N+RDWLYV+DHVRAL + ++GR Sbjct: 185 SNCSNNYGPYQFPEKLIPHMILNALDGKPLPIYGDGSNIRDWLYVDDHVRALVRIFERGR 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDSS 299 +GE YN+GG+NER N+++V + LL+ L+P+S H +LI F++DRPGHDRRY +D + Sbjct: 245 LGENYNVGGHNERTNLEVVNTLCDLLNELLPESVHRPHRKLISFVKDRPGHDRRYGMDIN 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K++ E+GW P+ E+GL TV WYL+N W R Sbjct: 305 KVRQELGWRPEWEFEAGLKMTVNWYLENGPWVR 337 >gi|302028136|gb|ADK90950.1| RfbB [Neisseria meningitidis] Length = 341 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 183/332 (55%), Positives = 246/332 (74%), Gaps = 6/332 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KREAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G GE YNIGG+NE+ N++++ I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVAGETYNIGGHNEKANLEVIKTICALLEELVPEKPAGVARYEDLITFVQDRPGHDARYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 303 VDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334 >gi|149197652|ref|ZP_01874702.1| dTDP-D-glucose 4;6-dehydratase [Lentisphaera araneosa HTCC2155] gi|149139222|gb|EDM27625.1| dTDP-D-glucose 4;6-dehydratase [Lentisphaera araneosa HTCC2155] Length = 373 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/357 (54%), Positives = 244/357 (68%), Gaps = 26/357 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGSA+ R L+ + +VL +DKLTYAGNL SL + S + F QVDIC Sbjct: 1 MKIIVTGGAGFIGSAVIRNLIENTNDEVLNLDKLTYAGNLESLTSVENSERYHFAQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL-- 118 DRE + + FQPD I++ AAESHVDRSI G EF+ TNIIGT+ LLE R +W L Sbjct: 61 DREAVEKVFEAFQPDIIMHLAAESHVDRSIDGPGEFMQTNIIGTYTLLEVARKYWEALPS 120 Query: 119 ----------SQDKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDY 166 S+ K FRF ISTDEVYG L+ + LF ED PY PSSPYSA+KASSD+ Sbjct: 121 RKVTGDRDQVSESTKKAFRFHHISTDEVYGDLEGPEDLFREDTPYAPSSPYSASKASSDH 180 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW TYG+PV+++NCSNNYGPYHFPEKLIPL + + +YGDG+ +RDWLYV Sbjct: 181 LVRAWNRTYGLPVVITNCSNNYGPYHFPEKLIPLVTLNALAQKDLPVYGDGKQIRDWLYV 240 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------------KS 274 +DH RAL LV KKG GE YNIGG+NE++NI++V I +LD L P K Sbjct: 241 DDHARALCLVAKKGSNGETYNIGGHNEKQNIEVVKTICSILDELAPLSENSSIQNSELKI 300 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++ +LI F++DRPGHD RYAID+ KI+ ++GW P+E ESG+ KTV WYL N W Sbjct: 301 KNYEDLIVFVKDRPGHDLRYAIDADKIERDLGWTPEETFESGIRKTVEWYLANKDSW 357 >gi|85713614|ref|ZP_01044604.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] gi|85699518|gb|EAQ37385.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] Length = 354 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/333 (55%), Positives = 243/333 (72%), Gaps = 1/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGSA+ R+L+ +V+ IDK TYA NL+SL +++ ++F + ICD Sbjct: 8 IFVTGGAGFIGSAVVRHLLTHTHARVVNIDKCTYAANLDSLPGTNENLNYAFEKQCICDG 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++++PDA++N AAESHVDRSI G EFI TNI+GTF LL+E+ W LS +K Sbjct: 68 VGLRHLFEKYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQESLRHWRSLSHEK 127 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +FRFL +STDEV+GSL D G F+E Y P+SPYSA+KASSD+LV AW TY +P L+ Sbjct: 128 RRKFRFLHVSTDEVFGSLGDDGFFTETTAYAPNSPYSASKASSDHLVRAWRETYELPTLV 187 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIP I + + G + +YGDG+N+RDWLYV+DH RAL L L+ G Sbjct: 188 TNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLYVDDHARALSLTLEHGA 247 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG NER N+ +V I LLD + P + H LI F+ DRPGHDRRYAID+SK+ Sbjct: 248 VGETYNVGGRNERTNLHVVESICDLLDEIAPGATRHRNLITFVADRPGHDRRYAIDASKL 307 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + E+GW +EN ESG+ KTV WY++ WWR + Sbjct: 308 ERELGWVAEENFESGIEKTVRWYVEEQPWWRAI 340 >gi|332306497|ref|YP_004434348.1| dTDP-glucose 4,6-dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173826|gb|AEE23080.1| dTDP-glucose 4,6-dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 363 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/347 (53%), Positives = 247/347 (71%), Gaps = 15/347 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+L+ + + V+ +D LTYAGN S+ + QS+ ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHLLENTQDSVINVDVLTYAGNTESIPDELQSDRYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I+ + QPDA+++ AAESHVDRSI G FI TN++GT+ LL+ R +W LSQ Sbjct: 61 DAAEIKRVFETHQPDAVMHLAAESHVDRSIDGPGAFIQTNVVGTYTLLDAAREYWQNLSQ 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 +K QF F ISTDEVYG L + LF ED PY PSSPYSA+KASSD+LV + Sbjct: 121 ARKAQFLFHHISTDEVYGDLPHPDELPSGSELPLFIEDTPYAPSSPYSASKASSDHLVRS 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKL+P I + G + +YGDG +RDWL+VEDH Sbjct: 181 WQRTYGLPTVITNCSNNYGPYHFPEKLVPHVILNALAGKPLPVYGDGSQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-----HTELIRFIE 285 RAL +V+K GR+GE +NIGG+NE++N+D+V I LLD L P+ S + +LI F++ Sbjct: 241 RALCVVVKSGRVGETFNIGGHNEKRNLDVVRTICTLLDELAPEQRSPDISAYADLITFVK 300 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID+S I+ E+GW P+E+ SG+ KTV WYL N WW+ Sbjct: 301 DRPGHDARYAIDASHIQKELGWAPEEDFISGMRKTVQWYLANESWWQ 347 >gi|90425660|ref|YP_534030.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB18] gi|90107674|gb|ABD89711.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB18] Length = 344 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/338 (54%), Positives = 241/338 (71%), Gaps = 3/338 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +I+TGGAGFIGSALCR++V+ ++V+ IDKLTYAG SLK + + F F Q+DICD Sbjct: 5 VIITGGAGFIGSALCRHVVSSTDVKVVCIDKLTYAGTRTSLKTLEGNPRFVFEQLDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + QP +++ AAESHVDRSI A FITTNI GTF+LLE R + L+ Sbjct: 65 AAMAGVFATHQPRGVIHLAAESHVDRSIASAAPFITTNINGTFVLLEAARAYHGALAAAD 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +D F+F +STDEVYG+L + G+F ED PY+P+SPYSA+KA+SD+LV AW HTYG+P + Sbjct: 125 RDGFKFHHVSTDEVYGALGETGVFKEDTPYSPNSPYSASKAASDHLVNAWLHTYGLPTVT 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGP+ FPEKL P+ I +EG + +YG G NVRDWL+VEDH RAL+ V K Sbjct: 185 SNCSNNYGPHQFPEKLFPVMILNGLEGRPLPVYGQGANVRDWLFVEDHARALWTVFDKAA 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSS 299 +GE+Y IGG++ER+NID+V I LL L P+ S+ LI F+ DR GHD RY++D S Sbjct: 245 VGEKYMIGGHSERRNIDVVHGICDLLTELRPRPDGSSYRSLISFVTDRAGHDFRYSVDCS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI+ E+GW PQ + E GL +TV WY+DN WWW+PL ++ Sbjct: 305 KIERELGWKPQHSFEDGLRRTVQWYIDNAWWWQPLRQK 342 >gi|331004826|ref|ZP_08328244.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium IMCC1989] gi|330421357|gb|EGG95605.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium IMCC1989] Length = 354 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/335 (56%), Positives = 247/335 (73%), Gaps = 5/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL+SL+ +S SN + F QVDICD Sbjct: 5 VLITGGAGFIGSAVVRHIIGNTQDNVINLDKLTYAGNLSSLESVSGSNRYVFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ +P+ +++ AAESHVDRSI G D FITTNI+GT+ LLE +R ++ L + + Sbjct: 65 YELQRVFDVHKPNKVMHLAAESHVDRSIDGPDTFITTNIVGTYTLLEASRRFYMSLGKSE 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +F F ISTDEVYG L +GLF+E Y PSSPYSATKASSD+LV AW T+G+P L+ Sbjct: 125 KARFLFHHISTDEVYGDLGTEGLFTETTSYAPSSPYSATKASSDHLVRAWHRTFGLPTLV 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWLYVEDH RALY V+ +G Sbjct: 185 TNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGDGSQVRDWLYVEDHARALYDVISRGV 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAID 297 GE YNIGG+NER+NI++V+ I +L+ L P + +LI F+EDRPGHD RYAID Sbjct: 245 AGETYNIGGHNERQNIEVVYAICDILEKLRPDKPLGIQRYRDLIVFVEDRPGHDVRYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +SKI+ E+ W P E+ ESG++KTV WYL N WW+ Sbjct: 305 ASKIQKELDWLPNESFESGISKTVQWYLSNESWWQ 339 >gi|148832474|gb|ABR14152.1| RfbB [Haemophilus influenzae] Length = 347 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/334 (55%), Positives = 241/334 (72%), Gaps = 6/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL RYL+ +++ +DKLTYAGNL SLK + ++F+Q DICD Sbjct: 8 ILVTGGAGFIGSALVRYLLEKTHNKIVNVDKLTYAGNLASLKTVENHPRYAFVQADICDT 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++QPDA+++ AAESHVDRSI + EFI TNI+GT+ LLE T +W L K Sbjct: 68 KALSYIFAQYQPDAVIHLAAESHVDRSINASSEFIQTNIVGTYCLLESTLDYWHRLDNQK 127 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL ISTDEVYG L ++GLF+E Y PSSPYSA+KA+SD+LV AW TYG+P + Sbjct: 128 KSSFRFLHISTDEVYGDLKSNEGLFTETSAYKPSSPYSASKAASDHLVQAWYRTYGLPTI 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++ SNNYGPY +PEKLIPL I IEG + +YGDG +RDWL+VEDH+ ALY VL KG Sbjct: 188 ITHSSNNYGPYQYPEKLIPLMILNAIEGKTLPIYGDGLQIRDWLFVEDHIDALYNVLMKG 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRYAI 296 IGE YNIGGNNE+ NID+V I LL+ +P H +LI +++DRPGHD RYA+ Sbjct: 248 NIGETYNIGGNNEKSNIDVVRSICSLLEEFLPNKPKHINKYEDLICYVQDRPGHDLRYAL 307 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI ++GW P+E ESGL KTV WYL++ W Sbjct: 308 DTSKINHKLGWIPKETFESGLRKTVIWYLNHQEW 341 >gi|146343782|ref|YP_001208830.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] gi|146196588|emb|CAL80615.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] Length = 357 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 244/336 (72%), Gaps = 2/336 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGSA+ R+L+ D +V+ IDKLTYA NL+SL + + ++F Q DICD Sbjct: 8 IFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLDSLPGAAGNPHYAFEQADICDA 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++QPDA++N AAESHVDRSI G EFI TNI+GTF LL+E + LS +K Sbjct: 68 AALRKLFDKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQEALRHFRSLSPEK 127 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRFL ISTDEV+G+L D GLF+E Y P+SPYSA+KASSD+LV AW TY +P ++ Sbjct: 128 RAGFRFLHISTDEVFGTLGDTGLFTETTAYAPNSPYSASKASSDHLVRAWRETYELPTMI 187 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIP I + + + +YGDGQN+RDWL+VEDH RAL LVL++G+ Sbjct: 188 TNCSNNYGPYHFPEKLIPHMIIKGLGFETLPVYGDGQNIRDWLFVEDHARALTLVLERGQ 247 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YN+GG NER N+ +V I LLDA+ P +LI F+ DRPGHDRRYAID+SK Sbjct: 248 VGETYNVGGRNERTNLHVVETICDLLDAVAPGPQGGRRQLISFVTDRPGHDRRYAIDASK 307 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 ++ E+GW +E E+G+ KTV WY+ WW+ + + Sbjct: 308 LERELGWRAEETFETGIAKTVRWYVQEKPWWQAILQ 343 >gi|581659|emb|CAA50767.1| rfbB [Shigella flexneri] Length = 361 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/340 (54%), Positives = 237/340 (69%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKIPVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFRTAPARRVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E +SPYSA+KAS+D+LV A Sbjct: 121 EKKKSFRFHHISTDEVYGDLPHPDEANNNETLPLFTETTTKRQNSPYSASKASNDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340 >gi|3832507|gb|AAC70775.1| dTDP-D-glucose 4,6 dehydratase [Klebsiella pneumoniae] Length = 354 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/339 (54%), Positives = 245/339 (72%), Gaps = 7/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + +V V+D LTYAGNL SL ++ S +SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTLDEVRVMDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+PD +++ AAESHVDRSI G FI TN+IGTF LLE R +WS L + Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIHTNVIGTFTLLEAARHYWSGLVE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS---EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++K FRF ISTDEVYG L + + + Y PSSPYSA+KA SD+LV AW TYG+ Sbjct: 121 EQKQAFRFHHISTDEVYGDLHRSQSTCPPKKTSYAPSSPYSASKAGSDHLVRAWNRTYGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P++++NCSNNYGPYHFPEKLIPL I + G + +YG+G+ +RDWLYVE+H RALY V Sbjct: 181 PLVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEEHARALYKVA 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRR 293 +G+ GE YNIGG+NERKNID+V I +LD ++ P + +H +LI F+ DRPGHD R Sbjct: 241 TEGKSGETYNIGGHNERKNIDVVRTICTILDKVVAQKPGNITHFADLITFVTDRPGHDLR 300 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAID++KI+ ++GW PQE ESG+ KTV WYL+N WW+ Sbjct: 301 YAIDATKIQRDLGWVPQETFESGIEKTVHWYLNNQTWWQ 339 >gi|254362238|ref|ZP_04978352.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica PHL213] gi|153093813|gb|EDN74748.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica PHL213] Length = 335 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/333 (55%), Positives = 241/333 (72%), Gaps = 6/333 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSAL RYL+ V+ +DKLTYAGNL SL+ ++ + F + DIC Sbjct: 1 MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLESVAHHERYHFEKADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I ++QPD +++ AAESHVDRSI GA +FI TNI+GT+ LLE R +W L + Sbjct: 61 ASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEAARAYWDTLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRFL ISTDEVYG L K LF+E PYNPSSPYSA+KA+SD+L AW TYG+P Sbjct: 121 PRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYSASKAASDHLARAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYG Y +PEKLIPL I +EG + +YG+G VRDWL+VEDH+RALYLVL+ Sbjct: 181 TVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGNGLQVRDWLFVEDHIRALYLVLQ 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 KG+IGE YNIGG+NE+ NI++V I +L ++P + + +LI +++DRPGHD RY Sbjct: 241 KGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNNPLVVGQYADLITYVQDRPGHDFRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 AID+SKI+ E+ W P+E ESGL KTV WYL N Sbjct: 301 AIDTSKIEKELDWKPKETFESGLRKTVEWYLAN 333 >gi|13476273|ref|NP_107843.1| dTDP-D-glucose-4,6-dehydratase [Mesorhizobium loti MAFF303099] gi|14027034|dbj|BAB53988.1| dTDP-D-glucose-4,6-dehydratase [Mesorhizobium loti MAFF303099] Length = 356 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/341 (55%), Positives = 241/341 (70%), Gaps = 4/341 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIGSA+CR+L + +V +DKLTYAGNL SL++I ++ + F DIC Sbjct: 1 MNFLVTGGAGFIGSAVCRHLCANPAYRVTNLDKLTYAGNLASLRQIENAHNYRFAHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ D ++N AAESHVDRSI G FI TNI+GT+ +L +W L Sbjct: 61 DERAVLDIMRRDDIDIVMNLAAESHVDRSIDGPGAFIETNIVGTYRILNAALEYWRGLPD 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+K +FRF +STDEV+G L D G+F E+ PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 DRKSRFRFHHVSTDEVFGDLPFDGGMFVEETPYAPSSPYSASKAASDHLVRAWHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+LSNCSNNYGPYHFPEKLIPL I ++ + +YG G NVRDWL+VEDH RAL LV Sbjct: 181 VVLSNCSNNYGPYHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLFVEDHARALELVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 KG GE YN+GGN+ER N+ +V I LLD P++ + +LI F+ DRPGHDRRYAI Sbjct: 241 KGTPGESYNVGGNSERTNLAVVETICDLLDIRRPRAGGRCYRDLISFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D+SKI E+GW P EN +SGL +TV W+LDN WWW P+ ++ Sbjct: 301 DASKIGRELGWAPSENFDSGLARTVDWFLDNKWWWGPIREQ 341 >gi|281603178|gb|ADA76162.1| DTDP-glucose 4,6-dehydratase [Shigella flexneri 2002017] Length = 338 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/321 (58%), Positives = 231/321 (71%), Gaps = 6/321 (1%) Query: 18 RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAI 77 RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICDR + E QPD + Sbjct: 2 RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 61 Query: 78 VNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVY 137 ++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++DKK FRF ISTDEVY Sbjct: 62 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVY 121 Query: 138 GSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE 195 G L F+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHFPE Sbjct: 122 GDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE 181 Query: 196 KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERK 255 KLIPL I + G + +YG+GQ +RDWLYVEDH RALY V G++GE YNIGG+NERK Sbjct: 182 KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERK 241 Query: 256 NIDIVFEIGFLLDALI---PKSYS-HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 N+D+V I LL+ L P + + +LI F+ DRPGHD RYAID+SKI E+GW PQE Sbjct: 242 NLDVVETICELLEELASNKPHGVAYYRDLITFVADRPGHDLRYAIDASKIARELGWLPQE 301 Query: 312 NMESGLNKTVCWYLDNNWWWR 332 ESG+ KTV WYL N WW+ Sbjct: 302 TFESGMRKTVQWYLANESWWK 322 >gi|269959355|ref|ZP_06173738.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835792|gb|EEZ89868.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 354 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/338 (55%), Positives = 241/338 (71%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL E+S S + F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIRDTQDTVINLDKLTYAGNLESLAEVSDSERYHFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + + QPD +++ AAESHVDRSI G FI TN++GT+ +LE R +WS L + Sbjct: 61 QRDELDRVFAKHQPDLVMHLAAESHVDRSIDGPAAFIETNVMGTYHILESARQYWSTLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG P Sbjct: 121 TRKAAFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ P S+ LI +++DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICSLLEEFRPNKPAGVESYESLIIYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI E+ W P+E ESG+ KTV WYL+N WW+ Sbjct: 301 AIDATKIARELNWTPEETFESGIRKTVEWYLNNQQWWQ 338 >gi|158605287|gb|ABW74897.1| dTDP-D-glucose-4,6-dehydratase [Sphingomonas sp. ATCC 53159] Length = 353 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 184/336 (54%), Positives = 241/336 (71%), Gaps = 5/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGSA+ R+LV +V+ +DKLTYAGN SL I + + F+ DI D Sbjct: 5 FLVTGGAGFIGSAVVRHLVRQ-GARVINLDKLTYAGNPASLTAIENAPNYRFVHADIADT 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L+E Q D +++ AAESHVDRSI G EFI TN++GTF LL+ +W L +K Sbjct: 64 ATILPLLREEQVDVVMHLAAESHVDRSIDGPGEFIETNVVGTFKLLQSALQYWRELEGEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +D FRF ISTDEV+G L D G+F+E+ PY+PSSPYSA+KA+SD+LV AWGHTYG+PV+ Sbjct: 124 RDAFRFHHISTDEVFGDLPFDSGIFTEETPYDPSSPYSASKAASDHLVRAWGHTYGLPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGP+HFPEKLIPL I +EG + +YG G+N+RDWLYV+DH +AL + G Sbjct: 184 LSNCSNNYGPFHFPEKLIPLTILNALEGKPLPVYGKGENIRDWLYVDDHAKALATIATTG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 ++G+ YN+GG NER N+ +V I LLD IP ELI F+ DRPGHDRRYAID+ Sbjct: 244 KVGQSYNVGGRNERTNLQVVETICDLLDQRIPLADGRKRRELITFVTDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW +EN ++G+ T+ WYL N WWW P+ Sbjct: 304 TKLETELGWKAEENFDTGIAATIDWYLANEWWWGPI 339 >gi|92116637|ref|YP_576366.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] gi|91799531|gb|ABE61906.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] Length = 355 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/334 (55%), Positives = 245/334 (73%), Gaps = 2/334 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGSA+ R+L+++ +V+ IDK TYA NL+SL +++ ++F + ICD Sbjct: 8 IFVTGGAGFIGSAVIRHLLHNTHARVVNIDKCTYAANLDSLPGTNENLNYAFEKQCICDG 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + ++PDA++N AAESHVDRSI G EFI TNI+GTF LL+ET W LS +K Sbjct: 68 TGLRHLFERYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQETLRHWRTLSPEK 127 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRFL +STDEV+GSL D G F+E Y P+SPYSA+KASSD+LV AW TY +P L+ Sbjct: 128 RKTFRFLHVSTDEVFGSLGDDGFFTETTAYAPNSPYSASKASSDHLVRAWRETYELPTLV 187 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIP I + + G + +YGDG+N+RDWLYVEDH +AL LVL+ G Sbjct: 188 TNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLYVEDHAKALTLVLEHGL 247 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YN+GG NER N+ +V I LLD + P + + ELI F+ DRPGHDRRYAID+SK Sbjct: 248 VGETYNVGGRNERTNLHVVESICNLLDEVAPGARGARRELITFVADRPGHDRRYAIDASK 307 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ E+GW +EN ESG+ KTV WY+D WWR + Sbjct: 308 LERELGWRAEENFESGIEKTVRWYVDEQPWWRAI 341 >gi|152994869|ref|YP_001339704.1| dTDP-glucose 4,6-dehydratase [Marinomonas sp. MWYL1] gi|150835793|gb|ABR69769.1| dTDP-glucose 4,6-dehydratase [Marinomonas sp. MWYL1] Length = 361 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/343 (54%), Positives = 247/343 (72%), Gaps = 12/343 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGSA+ RYL++ + V+ +DKLTYAGNL S+ E +++ + F VDICD Sbjct: 3 KFLITGGAGFIGSAVVRYLLSCTQHNVVNLDKLTYAGNLESIPESFKNDRYVFELVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L+ +PD +++ AAESHVDRSI G EFI TN++GT+ LLE +R +W L++D Sbjct: 63 AVELDRVLQTHKPDVVMHLAAESHVDRSIDGPGEFILTNVVGTYTLLEASRKYWMGLTED 122 Query: 122 KKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 KK FRF ISTDEVYG L D LF+E PY PSSPYSA+KASSD+LV AW Sbjct: 123 KKAAFRFHHISTDEVYGDLPHPDEVVGDLPLFTETTPYAPSSPYSASKASSDHLVRAWLR 182 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P +++NCSNNYGPYHFPEKLIP I + G + +YGDG +RDWLYVEDH RAL Sbjct: 183 TYGLPTIVTNCSNNYGPYHFPEKLIPHVILNALSGKALPVYGDGSQIRDWLYVEDHARAL 242 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP----KSYSHTELIRFIEDRPG 289 V +G+IGE YNIGG+NE++NID+V I LL+ L+P ++ +LI +++DRPG Sbjct: 243 VKVATEGKIGETYNIGGHNEKRNIDVVKTICALLEELVPIKPQGVNAYQDLITYVKDRPG 302 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 HD RYAID+SKI +E+GW P+E E+G+ KTV WYLDN WW+ Sbjct: 303 HDVRYAIDASKIANELGWQPEETFETGMRKTVQWYLDNQDWWQ 345 >gi|87307567|ref|ZP_01089711.1| dTDP-glucose 4,6-dehydratase [Blastopirellula marina DSM 3645] gi|87289737|gb|EAQ81627.1| dTDP-glucose 4,6-dehydratase [Blastopirellula marina DSM 3645] Length = 358 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 190/332 (57%), Positives = 245/332 (73%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L R LV + V+ +DKLTYAGNL+SL E++ + ++ DICD Sbjct: 5 VLVTGGAGFIGSCLVRQLVLQDDLTVINLDKLTYAGNLDSLAELADDSRHILVEGDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I L EF+P+AI N AAESHVDRSI G EF+ TN++GTF LLE R +W L+ D+ Sbjct: 65 DLIARLLAEFRPNAIFNLAAESHVDRSIDGPAEFVATNVVGTFTLLEAARNYWRELAADR 124 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +FRFLQ+STDEVYGSL K GLF+E PY+P+SPYSA+KAS+D+ V A+ HT+G+P L Sbjct: 125 AAEFRFLQVSTDEVYGSLGKTGLFTEATPYSPNSPYSASKASADHFVRAYFHTFGLPTLT 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP FPEKLIP+ I +EG + +YGDGQNVRDWL+VEDH RA+ VL++GR Sbjct: 185 TNCSNNYGPRQFPEKLIPVMILNALEGKPLPIYGDGQNVRDWLFVEDHCRAIRRVLQQGR 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH---TELIRFIEDRPGHDRRYAIDS 298 GE YNIGGN ER N++IV + LD L P +H +LI F++DRPGHDRRYAID+ Sbjct: 245 PGEVYNIGGNCERTNLEIVTAVCAALDRLCP-DLAHRPCEKLITFVKDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+KSE+ W P E E+GL KT+ WYL++ W Sbjct: 304 AKMKSELQWSPVETFETGLEKTIRWYLEHRTW 335 >gi|1314581|gb|AAC44074.1| dTDP-D-glucose-4,6-dehydratase [Sphingomonas sp. S88] Length = 353 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 242/336 (72%), Gaps = 5/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGSA+ R+LV +V+ +DKLTYAGN SL I + + F+ DI D Sbjct: 5 FLVTGGAGFIGSAVVRHLVRQ-GARVINLDKLTYAGNPASLTAIENAPNYRFVHADIADT 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L+E Q D +++ AAESHVDRSI G EFI TN++GTF LL+ +W L +K Sbjct: 64 ATILPLLREEQVDVVMHLAAESHVDRSIDGPGEFIETNVVGTFKLLQAALQYWRELEGEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEV+G L D G+F+E+ PY+PSSPYSA+KA+SD+LV AWGHTYG+PV+ Sbjct: 124 REAFRFHHISTDEVFGDLPFDSGIFTEETPYDPSSPYSASKAASDHLVRAWGHTYGLPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGP+HFPEKLIPL I +EG + +YG G+N+RDWLYV+DH +AL + G Sbjct: 184 LSNCSNNYGPFHFPEKLIPLTILNALEGKPLPVYGKGENIRDWLYVDDHAKALATIATTG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 ++G+ YN+GG NER N+ +V I LLD IP ELI F+ DRPGHDRRYAID+ Sbjct: 244 KVGQSYNVGGRNERTNLQVVETICDLLDQRIPLKDGKKRRELITFVTDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW +EN ++G+ T+ WYL+N WWW P+ Sbjct: 304 TKLETELGWKAEENFDTGIAATIDWYLENEWWWGPI 339 >gi|16127859|ref|NP_422423.1| dTDP-D-glucose-4,6-dehydratase [Caulobacter crescentus CB15] gi|221236680|ref|YP_002519117.1| dTDP-glucose 4,6-dehydratase [Caulobacter crescentus NA1000] gi|13425381|gb|AAK25591.1| dTDP-D-glucose-4,6-dehydratase [Caulobacter crescentus CB15] gi|220965853|gb|ACL97209.1| dTDP-glucose 4,6-dehydratase [Caulobacter crescentus NA1000] Length = 356 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 182/336 (54%), Positives = 239/336 (71%), Gaps = 2/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGG+GFIGSA+CR+L + +L DKLTYA + SL + + F+Q D+ Sbjct: 6 LRVMVTGGSGFIGSAVCRHLAGQNNVAILNYDKLTYAASQASLAMLEGKADYQFVQGDVA 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +K F+PD +++ AAESHVDRSI G +FI TNI+GT+++L+ W L Sbjct: 66 DAARVCATIKAFRPDVVMHLAAESHVDRSITGPGDFIQTNIVGTYVMLQAALEHWRGLEG 125 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K +FRF ISTDEV+GSL +GLFSE PY+P SPYSA+KASSD+L AW HTYG+PV Sbjct: 126 EAKGRFRFHHISTDEVFGSLGAEGLFSETTPYDPRSPYSASKASSDHLARAWQHTYGLPV 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPYHFPEKLIPL +EG + +YG G NVRDWL+VEDH RAL+L+ K Sbjct: 186 VVSNCSNNYGPYHFPEKLIPLVTLNALEGKPLPVYGKGDNVRDWLHVEDHARALHLIATK 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN+GG NER N+ +V I +LD L P S +LI F+ DRPGHD RYAID+ Sbjct: 246 GVPGESYNVGGRNERTNLQVVEAICDILDELRPIPGQSRRDLITFVADRPGHDARYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW QE ++GL KT+ WYLDN WW PL Sbjct: 306 TKLETELGWTAQETFDTGLRKTIQWYLDNEAWWAPL 341 >gi|300114910|ref|YP_003761485.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus watsonii C-113] gi|299540847|gb|ADJ29164.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus watsonii C-113] Length = 358 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/333 (56%), Positives = 238/333 (71%), Gaps = 3/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAGFIGSA+ R+ + V+ +DKLTYAGN SL++++ + F+ DIC R Sbjct: 6 LLITGGAGFIGSAVVRHFLAATDRGVINVDKLTYAGNPESLEDLASHPRYEFVHADICQR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + +QP+A+++ AAESHVDRSI FI TN+ GT+ILLE +W L++ Sbjct: 66 ESMAQIFARYQPEAVLHLAAESHVDRSIDSPAAFIDTNVTGTYILLEAALEYWRKLAKSA 125 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +FRF +STDEV+GSL GLF ED PY P+SPY+A+KA+SD+LV AW HTYG+PVL+ Sbjct: 126 QARFRFHHVSTDEVFGSLGATGLFREDSPYQPNSPYAASKAASDHLVRAWHHTYGLPVLI 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP FPEKLIPL + IEG + +YG G NVRDWLYVEDHVRAL +VL KGR Sbjct: 186 TNCSNNYGPRQFPEKLIPLMVLNGIEGKSLPVYGAGDNVRDWLYVEDHVRALEIVLDKGR 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG+NE+ N+++V I LLD L +S H LI F+ DRPGHDRRYAID+ Sbjct: 246 PGETYNIGGHNEKTNVEVVELICQLLDELFSQSSHRPHRSLITFVADRPGHDRRYAIDAG 305 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI E+GW P+E E+GL KTV WYLDN W R Sbjct: 306 KIARELGWRPRETFETGLRKTVQWYLDNQNWCR 338 >gi|68249461|ref|YP_248573.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 86-028NP] gi|68057660|gb|AAX87913.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 86-028NP] Length = 347 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/334 (55%), Positives = 240/334 (71%), Gaps = 6/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL YL+ +++ +DKLTYAGNL SLK + ++F+Q DICD Sbjct: 8 ILVTGGAGFIGSALVHYLLEKTHNKIVNVDKLTYAGNLASLKTVENHPRYAFVQADICDT 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++QPDA+++ AAESHVDRSI + EFI TNI+GT+ LLE T +W L K Sbjct: 68 KALSYIFSQYQPDAVIHLAAESHVDRSINASSEFIQTNIVGTYCLLESTLDYWHRLDNQK 127 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL ISTDEVYG L ++GLF+E Y PSSPYSA+KA+SD+LV AW TYG+P + Sbjct: 128 KSSFRFLHISTDEVYGDLKSNEGLFTETSAYKPSSPYSASKAASDHLVQAWYRTYGLPTI 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++ SNNYGPY +PEKLIPL I IEG + +YGDG +RDWL+VEDH+ ALY VL KG Sbjct: 188 ITHSSNNYGPYQYPEKLIPLMILNAIEGKTLPIYGDGLQIRDWLFVEDHIDALYNVLMKG 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRYAI 296 IGE YNIGGNNE+ NID+V I LL+ +P H +LI +++DRPGHD RYA+ Sbjct: 248 NIGETYNIGGNNEKSNIDVVRSICSLLEEFLPNKPKHIDKYEDLICYVQDRPGHDLRYAL 307 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI ++GW P+E ESGL KTV WYL++ W Sbjct: 308 DTSKINHKLGWIPKETFESGLRKTVIWYLNHQEW 341 >gi|300022033|ref|YP_003754644.1| dTDP-glucose 4,6-dehydratase [Hyphomicrobium denitrificans ATCC 51888] gi|299523854|gb|ADJ22323.1| dTDP-glucose 4,6-dehydratase [Hyphomicrobium denitrificans ATCC 51888] Length = 363 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/335 (55%), Positives = 236/335 (70%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++I+TGGAGFIGSAL R+LV D QV +DKLTYA NL+SLK +S + F DIC Sbjct: 1 MKVIITGGAGFIGSALVRHLVRDRDWQVANVDKLTYAANLDSLKSVSSAPNHRFFPADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +PDAI++ AAE+HVDRSI G+ EFITTNI+GT +LLE R + S L Sbjct: 61 DASAMDAIFADIEPDAIIHLAAETHVDRSINGSAEFITTNILGTHVLLESARRYLSNLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF+ +STDEV+GSL G F+E Y+P SPYSA+KA+SD+L AW TYG+P Sbjct: 121 SAQSHFRFVHVSTDEVFGSLPPGGFFTESTAYDPRSPYSASKAASDHLASAWHATYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGP+ FPEKLIPL I +EG + +YGDG+ VRDWL+V+DHV AL V++ Sbjct: 181 ITTNCSNNYGPHQFPEKLIPLVILNALEGKPLPVYGDGRQVRDWLHVDDHVTALTRVVEH 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE YNIGG +NI +V I LD L P + +LI +EDRPGHDRRYAID S Sbjct: 241 GRIGETYNIGGRAPMENIAVVEAICKALDTLRPAQHPRRDLIVHVEDRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+SE+GW + + +G+ TV WYLDN WWRPL Sbjct: 301 KIESELGWRAERSFATGIADTVQWYLDNESWWRPL 335 >gi|163803282|ref|ZP_02197161.1| dTDP-D-glucose 4;6-dehydratase [Vibrio sp. AND4] gi|159172919|gb|EDP57757.1| dTDP-D-glucose 4;6-dehydratase [Vibrio sp. AND4] Length = 349 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/349 (54%), Positives = 241/349 (69%), Gaps = 6/349 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ D + V+ +DKLTYAGNL SL E++ S + F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIRDTQDSVINLDKLTYAGNLESLAEVADSERYHFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L + Sbjct: 61 QRNELERVFAEHQPDLVMHLAAESHVDRSIDGPAAFIDTNIMGTYYLLESARQYWSRLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV AW TYG P Sbjct: 121 TRKAVFRFHHISTDEVYGDLAGSEDLFTETTSYAPSSPYSASKASSDHLVRAWQRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKL+PL I + G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLVPLMILNALAGKPLPVYGDGNQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ L P S+ LI ++DRPGHD RY Sbjct: 241 EGEIGETYNIGGHNEKANIEVVKTICSLLEGLRPNKPAGVESYESLITHVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 AID++KI + W P+E ESG+ KTV WYL+N WW+ + ND Sbjct: 301 AIDATKIAQALNWTPEETFESGIRKTVEWYLNNQQWWQSVLDGSYSPND 349 >gi|29420389|gb|AAO39692.1| putative dTDP-glucose-4,6-dehydratase [Escherichia coli] gi|40950658|gb|AAR97956.1| RmlB [Shigella dysenteriae] Length = 362 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 196/358 (54%), Positives = 251/358 (70%), Gaps = 16/358 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ RY++N V+ +DKLTYAGNL SLK+I ++ + F DIC Sbjct: 1 MKILITGGAGFIGSAVIRYIINHTNDSVVNVDKLTYAGNLQSLKDIEKNTRYKFECADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ QPDA+++ AAESHVDRSI G EFI TNIIGTFILLE + +W LS+ Sbjct: 61 DSAKMQEIFTNHQPDAVMHLAAESHVDRSINGPFEFIQTNIIGTFILLEIAKSYWLQLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSL------DKG----LFSEDMPYNPSSPYSATKASSDYLVLA 170 KK +F F +STDEVYG L D+G LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 SKKKKFIFHHVSTDEVYGDLAHPDVLDEGSPLPLFTEKNGYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W T+G+PV+++NCSNNYGPYHFPEKLIPL I ++G + +YG G +RDWLYVEDH Sbjct: 181 WYRTWGLPVIVTNCSNNYGPYHFPEKLIPLTILNALQGQPLPVYGTGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPG 289 RAL+LV+ R+GE YNIGG NE KNID+V ++ +LD + P S S+ +LI F++DRPG Sbjct: 241 RALHLVISSKRVGETYNIGGYNEMKNIDVVQKVCEILDEIQPLSEGSYKKLINFVKDRPG 300 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 HDRRYAID++KI +GW P E ESG+ KTV WYL N W E + +Y KW Sbjct: 301 HDRRYAIDATKITEHLGWQPIETFESGIRKTVHWYLQNKAW-----VESVKNGNYKKW 353 >gi|83955937|ref|ZP_00964448.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] gi|83839701|gb|EAP78879.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] Length = 345 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/335 (55%), Positives = 236/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R + V+ +D LTYA L ++ ++ S L+ F Q DIC Sbjct: 1 MKLLVTGGAGFIGSAVVRLAIAQGH-SVVNLDALTYAACLENVASVADSPLYVFEQADIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + QPDA+++ AAESHVDRSI G FI TN+ GT+ LLE R +W Sbjct: 60 DREALDRIFTTHQPDAVMHLAAESHVDRSIDGPGAFIQTNVTGTYTLLEAARAYWQ--GA 117 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D FRF ISTDEVYGSL G F+ED PY+P SPYSA+KA+SD+LV AWG TYG+P+ Sbjct: 118 GKPDGFRFHHISTDEVYGSLGPTGQFTEDTPYDPRSPYSASKAASDHLVRAWGETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGPYHFPEKL+P+ I + + G + +YGDG NVRDWL+VEDH AL VL K Sbjct: 178 VLTNCSNNYGPYHFPEKLVPVVILKALAGEPIPVYGDGANVRDWLFVEDHADALLTVLTK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++G YNIGG NE N+++V I LLD L P+ H +LI F+ DRPGHD+RYAID + Sbjct: 238 GKLGRSYNIGGENEVSNLEMVKMICALLDDLHPEGAPHADLITFVADRPGHDQRYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P +E GL +TV WYL+N WWR L Sbjct: 298 RIRTELGWRPSVTVEEGLARTVDWYLENKDWWRAL 332 >gi|218767223|ref|YP_002341735.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis Z2491] gi|218767235|ref|YP_002341747.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis Z2491] gi|12230535|sp|Q9S642|RFBB_NEIMA RecName: Full=dTDP-glucose 4,6-dehydratase gi|4574160|gb|AAD23919.1|AF083467_3 dTDP-D-glucose 4,6-dehydratase [Neisseria meningitidis] gi|121051231|emb|CAM07504.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis Z2491] gi|121051243|emb|CAM07518.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis Z2491] gi|302028157|gb|ADK90970.1| RfbB [Neisseria meningitidis] gi|319411430|emb|CBY91842.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis WUE 2594] gi|319411441|emb|CBY91856.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis WUE 2594] Length = 341 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 184/332 (55%), Positives = 244/332 (73%), Gaps = 6/332 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 303 VDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334 >gi|319897638|ref|YP_004135835.1| tdp-glucose 4,6-dehydratase [Haemophilus influenzae F3031] gi|317433144|emb|CBY81518.1| TDP-glucose 4,6-dehydratase [Haemophilus influenzae F3031] Length = 347 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/334 (55%), Positives = 241/334 (72%), Gaps = 6/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL RYL+ +++ +DKLTYAGNL SLK + ++F+Q DICD Sbjct: 8 ILVTGGAGFIGSALVRYLLEKTHNKIVNVDKLTYAGNLASLKTVENHPRYAFVQADICDT 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++QPDA+++ AAESHVDRSI + EFI TNI+GT+ LLE T +W L K Sbjct: 68 KALSYIFAQYQPDAVIHLAAESHVDRSINASSEFIQTNIVGTYRLLESTLDYWHRLDNQK 127 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL ISTDEVYG L ++GLF+E Y PSSPYSA+KA+SD+LV AW TYG+P + Sbjct: 128 KSSFRFLHISTDEVYGDLKSNEGLFTETSAYKPSSPYSASKAASDHLVQAWYRTYGLPTI 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++ SNNYGPY +PEKLIPL I IEG + +YGDG +RDWL+VEDH+ ALY VL KG Sbjct: 188 ITHSSNNYGPYQYPEKLIPLMILNAIEGKTLPIYGDGLQIRDWLFVEDHIDALYNVLMKG 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRYAI 296 IGE YNIGGNNE+ NID+V I LL+ +P + +LI +++DRPGHD RYA+ Sbjct: 248 NIGEAYNIGGNNEKSNIDVVRSICSLLEEFLPNKPKYIDKYEDLICYVQDRPGHDLRYAL 307 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI ++GW P+E ESGL KTV WYL++ W Sbjct: 308 DTSKINHKLGWIPKETFESGLRKTVIWYLNHQEW 341 >gi|332286411|ref|YP_004418322.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] gi|330430364|gb|AEC21698.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] Length = 340 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/331 (56%), Positives = 238/331 (71%), Gaps = 6/331 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS L R+++ + V+ IDKLTYAGNL SL +S SN ++F DIC+ Sbjct: 3 KILVTGGAGFIGSTLIRHIIGNTGDFVVNIDKLTYAGNLQSLTSVSSSNRYAFEHADICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPDA+V+ AAESHVDRSI G FI TNI+GT+ LLE R WS L Sbjct: 63 RADLGHIFEQYQPDAVVHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEVARQHWSALGSA 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF +STDEVYG L +G F+E PY PSSPYSA+KA SD+LV AW TYG+PV Sbjct: 123 AKAGFRFHHVSTDEVYGDLAGPQGRFTEATPYAPSSPYSASKAGSDHLVRAWNRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++S+ SNN+GP+ +PEKLIPL I +EG + +YG GQ+VRDWLYVEDH RALY +L + Sbjct: 183 VVSHSSNNHGPWQYPEKLIPLMILNALEGKPLPVYGQGQHVRDWLYVEDHARALYQILSE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YN+GG NE++NID+V I LL+ L P + + ELI+F++DRPGHD RYA Sbjct: 243 GVVGETYNVGGRNEKRNIDVVRAICALLEELAPAKPAGVGRYDELIKFVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID+ KI E+GW PQE ESGL KTV WYLD Sbjct: 303 IDAGKIHRELGWTPQETFESGLRKTVQWYLD 333 >gi|163748893|ref|ZP_02156145.1| dTDP-glucose 4,6-dehydratase [Shewanella benthica KT99] gi|161331667|gb|EDQ02472.1| dTDP-glucose 4,6-dehydratase [Shewanella benthica KT99] Length = 357 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 246/337 (72%), Gaps = 5/337 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL R L+N+ V+ +DKLTYAGNL SL IS + + F+ DIC+ Sbjct: 9 ILVTGGAGFIGSALIRLLINETSHTVINLDKLTYAGNLKSLTSISANRRYHFIHGDICNS 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I+ L ++ PD +++ AAESHVDRSI G+ EFI TNI+GT+ LLE R +++ L +K Sbjct: 69 ELIQRLLSQYNPDIVMHLAAESHVDRSIDGSAEFIQTNIVGTYCLLEACRNYFARLDTEK 128 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRF +STDEV+G L D GLF+E+ PY PSSPYSA+KA++D+LV AW TY +PV+L Sbjct: 129 QATFRFHHVSTDEVFGELGDTGLFTENSPYQPSSPYSASKAAADHLVRAWSRTYKLPVVL 188 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGPY +PEKLIPL + + + G + +YGDGQ +RDWL+VEDHVRALYLV +G+ Sbjct: 189 SNCSNNYGPYQYPEKLIPLVLHKALAGESLPIYGDGQQIRDWLHVEDHVRALYLVALRGK 248 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALI----PKSYSHTELIRFIEDRPGHDRRYAID 297 +GE YNIGG NE+ N+ +V EI L+ I P +LI F+ DRPGHDRRYAID Sbjct: 249 LGETYNIGGGNEKTNLAVVTEICERLNTCILDKPPGIDDFKQLITFVADRPGHDRRYAID 308 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +SKI+ E+ W P +N ESGL T+ WY++N W++ L Sbjct: 309 ASKIEQELSWQPLQNFESGLASTLNWYINNPEWYQGL 345 >gi|332290202|ref|YP_004421054.1| dTDP-glucose 4,6 dehydratase [Gallibacterium anatis UMN179] gi|330433098|gb|AEC18157.1| dTDP-glucose 4,6 dehydratase [Gallibacterium anatis UMN179] Length = 344 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 242/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ +TGGAGFIGSA+ RY++N+ + V+ +DKLTYAGN+ SL E+S+S + F QVDIC Sbjct: 1 MKIFITGGAGFIGSAVIRYIINNTQNSVINVDKLTYAGNIESLIEVSKSKRYFFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++PDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W L++ Sbjct: 61 DSAALERIFSHYKPDAVMHLAAESHVDRSIDGPAGFIKTNIVGTYTLLEAARKYWLQLNE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K QFRF ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV AW T+G+P Sbjct: 121 NQKQQFRFHHISTDEVYGDLQGKEKLFTETTAYAPSSPYSASKASSDHLVRAWHRTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPY EKLIPL I + G + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPYQHSEKLIPLMILNALSGKKLPIYGNGMQIRDWLFVEDHTRALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G+IGE YNIGG+ E+ NID+V I LL+ L P ++ +LI F+ DRPGHD RY Sbjct: 241 EGKIGETYNIGGHCEKANIDVVKMICELLEKLAPNKPDGVKNYADLITFVTDRPGHDFRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AIDSSKI+ E+GW PQE ESGL KTV WYL N W Sbjct: 301 AIDSSKIQKELGWHPQETFESGLRKTVEWYLANRDW 336 >gi|325577350|ref|ZP_08147798.1| dTDP-glucose 4,6-dehydratase [Haemophilus parainfluenzae ATCC 33392] gi|325160674|gb|EGC72796.1| dTDP-glucose 4,6-dehydratase [Haemophilus parainfluenzae ATCC 33392] Length = 337 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 184/333 (55%), Positives = 247/333 (74%), Gaps = 6/333 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGG+GFIGSAL RY++N + V+ IDKLTYA N +SLKE+ + ++F Q+DICD Sbjct: 4 RILITGGSGFIGSALIRYIINQTQYSVINIDKLTYAANQSSLKEVENNPRYAFEQIDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 64 LKAIGNIFEKYQPDAVMHLAAESHVDRSITGAADFIQTNIVGTYTLLEVVKNYWHTLDKA 123 Query: 122 KKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG S + F+E PY+PSSPYSA+KA+SD+LV AW TYG+PV Sbjct: 124 KKTTFRFHHISTDEVYGDLSFSEPAFTEHSPYHPSSPYSASKAASDHLVHAWHRTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++N SNNYG Y EKLIPL I+ + G + +YGDG+ +RDWL+VEDHV+ALYLVL K Sbjct: 184 IITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGRQIRDWLFVEDHVQALYLVLTK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRYA 295 GR+GE YNIGGN E+ N+++V I LL+ L+P +H +LI F++DRPGHD RY+ Sbjct: 244 GRVGESYNIGGNCEKTNLEVVKMICELLEELVPNKPNHIKYYEDLITFVKDRPGHDVRYS 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D SKI +E+GW PQ E GL +TV WYL+NN Sbjct: 304 LDCSKIHAELGWQPQITFEQGLRQTVKWYLENN 336 >gi|315178435|gb|ADT85349.1| dTDP-glucose 4,6-dehydratase [Vibrio furnissii NCTC 11218] Length = 359 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/338 (54%), Positives = 242/338 (71%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ RY++ + V+ ID LTYAGNL SL + + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRYIIENTSDSVVNIDCLTYAGNLESLSMVDSNERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + E +P+A+++ AAESHVDRSI G+ FI TNI GT+ LLE R +W+ L + Sbjct: 61 NRYELDRVFFEHKPEAVMHLAAESHVDRSITGSSTFIETNISGTYTLLEAAREYWNTLEK 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K++FRF ISTDEVYG L+ LF+E+ Y+PSSPYSA+KA+SD+LV AW TYG P Sbjct: 121 SAKERFRFHHISTDEVYGDLEGTDDLFTEETSYHPSSPYSASKAASDHLVRAWHRTYGFP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPY FPEKLIPL I +EG + +YG+G +RDWL+VEDH RALY VL Sbjct: 181 TLVTNCSNNYGPYQFPEKLIPLVILNALEGKKLPVYGNGLQIRDWLFVEDHARALYRVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 G G+ YNIGG+NE+ NID+V I LL+ L P+ ++ +LI ++ DRPGHD RY Sbjct: 241 AGTTGQTYNIGGHNEKANIDVVKSICLLLEELAPEKPLGVNAYQDLIEYVSDRPGHDMRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI+ E+ W P+E SGL KTV WYLDN WW+ Sbjct: 301 AIDASKIERELSWKPEETFISGLRKTVLWYLDNKSWWQ 338 >gi|329119281|ref|ZP_08247968.1| dTDP-glucose 4,6-dehydratase [Neisseria bacilliformis ATCC BAA-1200] gi|327464628|gb|EGF10926.1| dTDP-glucose 4,6-dehydratase [Neisseria bacilliformis ATCC BAA-1200] Length = 353 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 183/338 (54%), Positives = 239/338 (70%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L++TGGAGFIGSAL R+L+ + +V+ +DKLTYAGNL SL ++ S ++F DIC Sbjct: 1 MTLLITGGAGFIGSALIRHLIQNTSERVVNLDKLTYAGNLQSLAAVAGSPRYTFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QP A+++ AAESHVDRSI A EFI TNI+GTF LLE R ++ + Sbjct: 61 DRAALERIFAQHQPRAVMHLAAESHVDRSIDSAGEFIQTNIVGTFTLLEAARAYFEKQPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ FRF ISTDEVYG L GLF+E PY PSSPYSA+KAS D+LV AW TY +P Sbjct: 121 NQRAAFRFHHISTDEVYGDLHDSDGLFTETTPYAPSSPYSASKASGDHLVRAWQRTYRLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP HFPEKLIP I + G + +YGDG +RDWLYVEDH RAL+ V+ Sbjct: 181 TLITNCSNNYGPCHFPEKLIPHIILNALAGRPLPIYGDGSQIRDWLYVEDHARALHTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 G+ GE YNIGG+NE+ N+++V + LL+ L P+ + +T+LI + DRPGHD RY Sbjct: 241 HGKTGETYNIGGHNEKTNLEVVRTVCALLEELAPRKPAGIARYTDLITHVPDRPGHDTRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ E+GW PQE +SG+ KTV WYLDN WW+ Sbjct: 301 AIDAAKIQRELGWAPQETFDSGIRKTVQWYLDNPDWWQ 338 >gi|157373248|ref|YP_001471848.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] gi|157315622|gb|ABV34720.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] Length = 367 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/335 (57%), Positives = 244/335 (72%), Gaps = 5/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL R+L+N+ +V+ +DKLTYAGNL SL I + + F+ DICDR Sbjct: 9 VLVTGGAGFIGSALVRFLINETSHRVINLDKLTYAGNLESLTSIESNERYHFILGDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + LK +QPD I++ AAESHVDRSI G DEFI TNI+GT+ LLE +R + + L K Sbjct: 69 PLVDDILKRYQPDIIMHLAAESHVDRSIDGPDEFIQTNILGTYTLLEASRSYLAELEGCK 128 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRF ISTDEVYG L + GLF+E PYNPSSPYSA+KA+SD+LV AW T+ +PV++ Sbjct: 129 QQDFRFHHISTDEVYGDLGETGLFTEQSPYNPSSPYSASKAASDHLVRAWCRTFQLPVVI 188 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP+ FPEKLIPL I +EG + +YGDG+ VRDWLYV+DH RALY V G+ Sbjct: 189 TNCSNNYGPFQFPEKLIPLVILNALEGKPLPVYGDGKQVRDWLYVDDHARALYKVATDGK 248 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYAID 297 G YNIGG NE++NID++ I L++LI S E LI +++DRPGHD RYAID Sbjct: 249 PGSTYNIGGYNEKQNIDVITTICDQLNSLIESKPSGIEEFNQLITYVKDRPGHDLRYAID 308 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++KIK+E+GW P E ESG+ KT+ WYLDN W R Sbjct: 309 ATKIKNELGWKPVETFESGIVKTIQWYLDNLEWCR 343 >gi|261492901|ref|ZP_05989447.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496749|ref|ZP_05993124.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307588|gb|EEY08916.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311442|gb|EEY12599.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 342 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 181/337 (53%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +++TGGAGFIGSAL R+L ++ +DKLTYA NL S+K + S + F QVDIC Sbjct: 3 LNVLITGGAGFIGSALIRFLAKQTDHHIINVDKLTYAANLASIKTVQNSERYYFEQVDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I ++QPDA+++ AAESHVDRSI A EFI TNI+GT+ LLE TR +W L + Sbjct: 63 ASGQISEIFCKYQPDAVMHLAAESHVDRSIKSAGEFIQTNIVGTYSLLEVTRQYWEHLPE 122 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF+ ISTDEVYG L +E++PY PS+PYSA+KAS+D+LV AW TYG+P Sbjct: 123 PRKSAFRFIHISTDEVYGDLPLTAEPSAENLPYAPSNPYSASKASADHLVRAWYRTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNN+GPY +PEKLIPL I+ ++G + +YGDG +RDW++VEDH+RALY VL Sbjct: 183 AIITNCSNNFGPYQYPEKLIPLMISNALQGKALPIYGDGLQIRDWIFVEDHIRALYDVLI 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 KG++G YNIG + E+ NI++V+ I LL+ L+P + +LIR+++DRPGHD RY Sbjct: 243 KGKLGASYNIGSHQEKSNIEVVYSICELLEELVPNKPKNVKKYVDLIRYVQDRPGHDVRY 302 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 A+DS+KI+ E+GW PQE ESGL KTV WYLDN WW Sbjct: 303 ALDSTKIQKELGWKPQETFESGLRKTVNWYLDNKEWW 339 >gi|114769672|ref|ZP_01447282.1| dTDP-D-glucose-4,6-dehydratase [alpha proteobacterium HTCC2255] gi|114549377|gb|EAU52259.1| dTDP-D-glucose-4,6-dehydratase [alpha proteobacterium HTCC2255] Length = 340 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 245/337 (72%), Gaps = 2/337 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + V+ ID LTYAGNL SL+ + ++ ++F QVDIC+ Sbjct: 4 KVLVTGGAGFIGSAVIRFILQNTDDCVVNIDALTYAGNLESLQGTASNSAYTFEQVDICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + E PD +++ AAESHVDRSI +FI TN++GT+ +LE + +WS L ++ Sbjct: 64 KKELVRVFSEHSPDVVMHLAAESHVDRSINSPSDFILTNVVGTYNMLEVAKAYWSNLDKN 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+D+F F ISTDEVYG L+ G LF+E+ PY PSSPYSA+KA+SD+LV AW TY PV+ Sbjct: 124 KQDRFIFHHISTDEVYGDLEDGELFTEETPYCPSSPYSASKAASDHLVRAWFRTYDFPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPY FPEKLIPL I IEG + +YG G VRDWLYVEDH ALY V+ KG Sbjct: 184 ISNCSNNYGPYQFPEKLIPLIINNAIEGKKLPIYGAGDQVRDWLYVEDHAEALYKVVTKG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSS 299 ++G+ YNIGG+NE+KNID+V I LLD LIP S+T I +EDRPGHD+RYAID++ Sbjct: 244 KLGQTYNIGGHNEKKNIDVVMTICNLLDELIPLADRSYTSQITHVEDRPGHDKRYAIDAA 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 KI ++ W P E ESG+ KTV WYLDN W + K Sbjct: 304 KISRDLSWQPSETFESGIRKTVLWYLDNKEWCVAVTK 340 >gi|51246072|ref|YP_065956.1| dTDP-glucose 4,6-dehydratase [Desulfotalea psychrophila LSv54] gi|50877109|emb|CAG36949.2| probable dTDP-glucose 4,6-dehydratase [Desulfotalea psychrophila LSv54] Length = 351 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/334 (55%), Positives = 244/334 (73%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + V+ + +LTYAGNL SL EI +S +SF QVDI Sbjct: 1 MKILITGGAGFIGSAVIRHIIQNTNDSVINLUQLTYAGNLESLSEIEKSPRYSFAQVDIU 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + QPDA+++ AAESHVDRSI G +FI TNI+GT LLE TR W L+ Sbjct: 61 EATSLNDLFTKTQPDAVMHLAAESHVDRSIDGPKDFIETNIVGTCNLLEATRQHWLTLAI 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++FRF ISTDEVYG L D F ED Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ADRNKFRFHHISTDEVYGDLKKDDPAFCEDNSYAPSSPYSASKASSDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP+ FPEKLIPL I +EG + +YG G+ +RDWLYVEDH RALY VL Sbjct: 181 VVISNCSNNYGPFQFPEKLIPLVILNALEGKKIPVYGTGEQIRDWLYVEDHARALYAVLS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAID 297 +G++G+ YNIGG+NE+ NI+++ I LL +IP KS ++ +LI +EDRPGHD RYAID Sbjct: 241 RGKVGDTYNIGGHNEKTNIEVIETICQLLQEIIPGKSSNYLDLISHVEDRPGHDLRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++KI +++ W PQE E+GL KTV WY++N WW Sbjct: 301 ATKISTDLDWRPQETFETGLRKTVTWYVNNKKWW 334 >gi|163793776|ref|ZP_02187750.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium BAL199] gi|159180887|gb|EDP65404.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium BAL199] Length = 359 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/337 (54%), Positives = 239/337 (70%), Gaps = 3/337 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R L+ + + V+ +D +TYA + +L + + ++F Q DI D Sbjct: 7 ILVTGGAGFIGSAVVRLLIAETDVSVVNLDVMTYAASGTALAAVEGNPRYAFEQADIRDA 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI G ++FI TN++GTF LL+ R W LS Sbjct: 67 DALADVFARHRPDAVMHLAAESHVDRSIDGPEDFIMTNVVGTFRLLQAARAHWETLSGSA 126 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K FRF ISTDEV+GSL D G F+E+ Y+P SPYSA+KASSD+LV AWG TYG+P+LL Sbjct: 127 KADFRFHHISTDEVFGSLGDDGYFTEETAYDPRSPYSASKASSDHLVRAWGETYGLPILL 186 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGPYHFPEKLIPL I + + G + +YGDG N+RDWLYVEDH RAL+ VL KG Sbjct: 187 SNCSNNYGPYHFPEKLIPLMILKGLRGDPLPVYGDGSNIRDWLYVEDHARALWTVLSKGV 246 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 G+ YN+GG+NE+ N+D+V I LLD P+S S + I F+ DRPGHD RYAID Sbjct: 247 PGDSYNVGGHNEKTNLDVVHTICDLLDKHAPRSDGVSRRDQISFVTDRPGHDFRYAIDPG 306 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 KI ++GW P+E ESG+ KTV WYLDN WW+P+ + Sbjct: 307 KIDRDLGWTPRETFESGIEKTVRWYLDNASWWQPIVQ 343 >gi|225077088|ref|ZP_03720287.1| hypothetical protein NEIFLAOT_02141 [Neisseria flavescens NRL30031/H210] gi|224951645|gb|EEG32854.1| hypothetical protein NEIFLAOT_02141 [Neisseria flavescens NRL30031/H210] Length = 354 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/338 (53%), Positives = 245/338 (72%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDIC Sbjct: 1 MTVLITGGAGFIGSAVVRHIIQNTQDSVVNVDKLTYAGNLESLTEVAGNPRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + Sbjct: 61 DRAELDRIFAQHRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPS 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++++ FRF ISTDEVYG L L +E PY PS+PY+A+KASSD+LV AW TYG+P Sbjct: 121 EQREAFRFHHISTDEVYGDLHGTDDLSAETAPYAPSNPYAASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ Sbjct: 181 AIVSNCSNNYGPRQFPEKLIPLTILNALGGKPLPVYGDGAQIRDWLFVEDHARALYQVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F+ DRPGHD RY Sbjct: 241 EGVVGETYNIGGHNEKVNIEVVKTICALLEELVPEKPAGVARYEDLITFVPDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID++KI+ ++GW P E ESG+ KTV WYLDN WW+ Sbjct: 301 AIDAAKIRRDLGWQPLETFESGIRKTVQWYLDNKTWWQ 338 >gi|307261952|ref|ZP_07543610.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868363|gb|EFN00182.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 357 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/338 (55%), Positives = 243/338 (71%), Gaps = 6/338 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TGGAGFIGSA+ RY++ + + +V+ +DKLTYAGNL SL +S S+ + F QVDICD Sbjct: 4 VFITGGAGFIGSAVIRYIIQNTQDRVVNVDKLTYAGNLTSLASVSNSSRYHFEQVDICDS 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I ++QPDA+++ AAESHVDRSI G F+ TNIIGT+ LLE +R +W L ++ Sbjct: 64 GRISQLFCKYQPDAVMHLAAESHVDRSIGGPATFMQTNIIGTYTLLEASRRYWLSLPLER 123 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG L LF+E Y PSSPYSA+KA+SD+LV AW TYG+P L Sbjct: 124 KQIFRFHHISTDEVYGDLKSSDELFTEKTAYAPSSPYSASKAASDHLVRAWFRTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP+ FPEKLIPL I + + GS + +YG+G +RDWL+VEDH ALY VL +G Sbjct: 184 VTNCSNNYGPFQFPEKLIPLMILKALSGSPLPIYGNGLQIRDWLFVEDHAIALYKVLCEG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 ++GE YNIGG+NE+ NI++V I LLD +P + + ELI +I+DRPGHD RYAI Sbjct: 244 KVGETYNIGGHNEKTNIEVVRMICRLLDEFVPSRLNGVSKYEELITYIQDRPGHDIRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+ KI E+GW PQE ESGL KTV WYL N WW+ + Sbjct: 304 DARKITDELGWQPQETFESGLRKTVEWYLSNKDWWQSI 341 >gi|75674742|ref|YP_317163.1| dTDP-glucose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] gi|74419612|gb|ABA03811.1| dTDP-glucose 4,6-dehydratase [Nitrobacter winogradskyi Nb-255] Length = 355 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 247/334 (73%), Gaps = 2/334 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGSA+ R+L++D +V+ IDK TYA NL+SL +++ ++F + ICD Sbjct: 8 IFVTGGAGFIGSAVVRHLLHDTHARVVNIDKCTYAANLDSLPGTNENLNYAFEKQCICDS 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++++PDA++N AAESHVDRSI G EFI TNI+GTF LL+ET W LS +K Sbjct: 68 AGLRHLFEKYRPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQETLRHWRSLSPEK 127 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +++FRFL +STDEV+GSL D G F+E Y P+SPYSA+KASSD+LV AW TY +P L+ Sbjct: 128 REKFRFLHVSTDEVFGSLGDSGYFTEATAYAPNSPYSASKASSDHLVRAWRETYELPTLI 187 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPYHFPEKLIP I + + + +YGDG+N+RDWLYV+DH RAL LVL+ G Sbjct: 188 TNCSNNYGPYHFPEKLIPHMIIKGLACEPLPVYGDGRNIRDWLYVDDHARALSLVLEHGA 247 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDSSK 300 +G YN+GG NER N+ +V I LLD + P + + H +LI F+ DRPGHDRRYAID+SK Sbjct: 248 VGHTYNVGGRNERTNLHVVESICDLLDEIAPNTTNRHRDLITFVTDRPGHDRRYAIDASK 307 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ E+GW +E+ ESG+ KTV WY+D WW+ + Sbjct: 308 LERELGWRAKEDFESGIEKTVRWYVDEQPWWQAI 341 >gi|312115797|ref|YP_004013393.1| dTDP-glucose 4,6-dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311220926|gb|ADP72294.1| dTDP-glucose 4,6-dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 354 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/340 (53%), Positives = 243/340 (71%), Gaps = 3/340 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGSAL R+L+ + VL +DKLTYA +L SL ++ + +SF+ IC Sbjct: 1 MKIIVTGGAGFIGSALVRHLIEETTHTVLNLDKLTYAASLASLACVAHNPRYSFVHGSIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F PD +N AAE+HVDRSI G FI TNI GTF LL+ + L Sbjct: 61 DSALLERVVATFDPDGFINLAAETHVDRSIDGPVAFIDTNINGTFRLLQAAQAHVERLPT 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D++ +FRFL +STDEVYGSL + G F E PY+P SPYSA+KA+SD+LV AWGHTYG+P+ Sbjct: 121 DRRARFRFLHVSTDEVYGSLGETGKFHEATPYDPRSPYSASKAASDHLVSAWGHTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIPL I + + G + +YG G+N+RDWLYV+DHVRAL V ++ Sbjct: 181 LITNCSNNYGPYQFPEKLIPLCIIKALAGEALPVYGRGENIRDWLYVDDHVRALTTVFER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAID 297 G GE YNIGG+ ER+NID+V I +LD L P+ + +LI F+ DRPGHD RYAID Sbjct: 241 GTPGETYNIGGDAERRNIDVVHRICAVLDTLRPRDSGKHYADLITFVADRPGHDARYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 +SKI++E+GW P+++ ++G+ TV WYL+N WW + + Sbjct: 301 ASKIRAELGWSPEQSFDAGIEATVKWYLENEDWWEDILAQ 340 >gi|92118531|ref|YP_578260.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] gi|91801425|gb|ABE63800.1| dTDP-glucose 4,6-dehydratase [Nitrobacter hamburgensis X14] Length = 350 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/334 (54%), Positives = 237/334 (70%), Gaps = 1/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+CR LV V+ IDKLTYA NL SL ++ ++F QVDIC Sbjct: 1 MRVLVTGGAGFIGSAVCRRLVLGYGTAVVNIDKLTYAANLRSLDALAGEPGYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +++PDA ++ AAESHVDRSI G FI TN++GT+ +LE R ++ L+ Sbjct: 61 DRADVEGVFAKYEPDATIHLAAESHVDRSITGPSAFINTNVVGTYNMLEAARKYYDRLTP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++D+FRF+ +STDEVYGSL GLF E+ Y PSSPYSA+KA+SD+L AW TY +PV Sbjct: 121 ERRDRFRFVHVSTDEVYGSLGAAGLFCEETSYRPSSPYSASKAASDHLAHAWFKTYELPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPY FPEKLIPLAI IE + +YG G+NVRDWLYV+DH L +L+ Sbjct: 181 IISNCSNNYGPYQFPEKLIPLAILNAIECKPLPIYGRGRNVRDWLYVDDHADGLIALLRC 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE+YN GGN+ER N+++V I LD ++P LIRF+ DRPGHD RYAID+S Sbjct: 241 GSPGEKYNFGGNSERTNLEVVELICDTLDCMMPAPDERRSLIRFVADRPGHDLRYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 K + E+GW P+ E G+ +TV WYLDN WW P Sbjct: 301 KARRELGWAPKGTFEKGIEQTVHWYLDNRSWWAP 334 >gi|319942929|ref|ZP_08017212.1| dTDP-glucose 4,6-dehydratase [Lautropia mirabilis ATCC 51599] gi|319743471|gb|EFV95875.1| dTDP-glucose 4,6-dehydratase [Lautropia mirabilis ATCC 51599] Length = 389 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/331 (56%), Positives = 240/331 (72%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + V+ +DKLTYAGN +L + + F QVDICDR Sbjct: 33 ILVTGGAGFIGSNFVLDWLAGSDEPVVNVDKLTYAGNRQNLASLEGNPAHHFEQVDICDR 92 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I + L +++P A+V+FAAESHVDRSI G F+ TN++GTF LLE R +W+ L + Sbjct: 93 EAIDALLAKYKPRAMVHFAAESHVDRSIHGPAAFVQTNMVGTFTLLEAARQYWNQLQGAE 152 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+LV A+ HTYG+PVL Sbjct: 153 KENFRFLHVSTDEVYGSLEADDPAFTETTPYQPNSPYSASKAGSDHLVRAYFHTYGMPVL 212 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL IT + G ++ +YGDG+NVRDWL+V+DH A+ VL+ G Sbjct: 213 TTNCSNNYGPYHFPEKLIPLVITNALAGKNLPIYGDGKNVRDWLFVKDHCSAIRRVLEAG 272 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 + GE YN+GG+NE+ NIDIV +I LLD + P + S+ LI F++DRPGHDRRYAID++ Sbjct: 273 KPGETYNVGGHNEKTNIDIVRQICKLLDEMKPDAAGSYERLITFVKDRPGHDRRYAIDAA 332 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P E E+G+ KTV WYLDN W Sbjct: 333 KIGRELGWTPAETFETGIRKTVRWYLDNQDW 363 >gi|299067780|emb|CBJ38990.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Ralstonia solanacearum CMR15] Length = 354 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/333 (57%), Positives = 236/333 (70%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG +L N V+ +DKLTYAGN +L + Q F Q DIC Sbjct: 3 HILVTGGAGFIGGNFVLNWLANPGADGVVNVDKLTYAGNRKTLAAVEQDPRHIFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S L + +P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 63 DRAALDSLLAQHKPRAVVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAVRAYWGGLDA 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 DAKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREVLG 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +GR+GE YN+GG NE+ N+++V+ + LLD L PK+ S+ + I F++DRPGHDRRYAID Sbjct: 243 RGRLGETYNVGGWNEKTNLEVVYTLCDLLDELKPKATGSYRDQIAFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E E+GL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFETGLRKTVQWYLDNQVW 335 >gi|312960465|ref|ZP_07774974.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] gi|311285350|gb|EFQ63922.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] Length = 355 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/347 (55%), Positives = 243/347 (70%), Gaps = 8/347 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+L+N+ V +D LTYAGN +SL + S+ + F + DI D Sbjct: 4 KILVTGGAGFIGSAVVRHLINE-NHSVANLDLLTYAGNTDSLASVENSSRYQFFKTDIGD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + F+PDA+++ AAESHVDRSI G +FI TNI+GT+ LLE R +WS L+ D Sbjct: 63 GPALDQIFMTFRPDAVMHLAAESHVDRSIDGPADFIRTNIVGTYTLLEAARRYWSALASD 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++FRF +STDEVYG LD LF+E PY PSSPYSA+KASSD+LV AW TYG+PV Sbjct: 123 AKNRFRFHHVSTDEVYGDLDGPDSLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIP I I G + +YGDG VRDWL+VEDH RAL VL + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPHVILNAIHGRPLPVYGDGLQVRDWLFVEDHARALCEVLCR 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V + LL+ L P + E LI F++DRPGHD RYA Sbjct: 243 GAVGETYNIGGHNEKTNIEVVETLCALLEELAPDKPAGVERYRDLITFVKDRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPLYKELKPD 341 ID+ KI E+GW P E ESG+ KTV WYL N WW R L + +P+ Sbjct: 303 IDAGKIARELGWKPHETFESGIRKTVQWYLQNKTWWQRVLNGQYRPE 349 >gi|51243897|ref|YP_063781.1| dTDP-D-glucose-4,6-dehydratase [Desulfotalea psychrophila LSv54] gi|50874934|emb|CAG34774.1| probable dTDP-D-glucose-4,6-dehydratase [Desulfotalea psychrophila LSv54] Length = 369 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 180/335 (53%), Positives = 246/335 (73%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ ++ + + F QVDIC Sbjct: 18 MKILVTGGAGFIGSAVIRHILENTDDSVVNLDKLTYAGNLESLEGVAGNEHYLFEQVDIC 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + QPDA+++ AAESHVDRSI G F+ TNI+GT +L+ + +WS L + Sbjct: 78 DREELVRVFAIHQPDAVMHLAAESHVDRSIDGPATFVETNIVGTSTILQVAQKYWSALPE 137 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++++ FRF +STDEVYG L + F+E+ Y PSSPYSA+KA+SD+LV AW TYG P Sbjct: 138 ERRECFRFHHVSTDEVYGDLADPEEFFTEETSYAPSSPYSASKAASDHLVRAWQRTYGFP 197 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPY FPEKLIPL I +EG + +YG+GQ +RDWL+VEDH RAL LVL+ Sbjct: 198 TIITNCSNNYGPYQFPEKLIPLMILNALEGKALPIYGNGQQIRDWLHVEDHARALLLVLR 257 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAI 296 +G+IGE YNIGG+NE+ N+++V + +L ++P + S+ +LI + DRPGHD RYAI Sbjct: 258 QGKIGETYNIGGHNEKSNLEVVHTLCDVLQEMVPGEEGSSYRDLISHVADRPGHDLRYAI 317 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D+ KI+ E+GW PQE ESG+ KTV WYLDN WW Sbjct: 318 DAGKIERELGWRPQETFESGIRKTVQWYLDNKGWW 352 >gi|261400016|ref|ZP_05986141.1| dTDP-glucose 4,6-dehydratase [Neisseria lactamica ATCC 23970] gi|269210234|gb|EEZ76689.1| dTDP-glucose 4,6-dehydratase [Neisseria lactamica ATCC 23970] Length = 346 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/331 (54%), Positives = 241/331 (72%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QV+ICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNVDKLTYAGNLESLTEVADNPRYAFEQVNICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYRRQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPY+A+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLGGTNDLFTETAPYAPSSPYAASKASSDHLVRAWQRTYGLPAI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY ++ KG Sbjct: 189 VSNCSNNYGPRQFPEKLIPLTILNALSGKPLPVYGDGMQIRDWLFVEDHARALYQLVSKG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VAGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI E+GW PQE ESG+ KTV WYLDN Sbjct: 309 DAAKIGRELGWKPQETFESGIRKTVQWYLDN 339 >gi|238798900|ref|ZP_04642366.1| dTDP-glucose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] gi|238717254|gb|EEQ09104.1| dTDP-glucose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] Length = 339 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/323 (56%), Positives = 234/323 (72%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R++++ V+V+DKLTYAGNL SL ++++ ++F QVDICDR + ++QPD Sbjct: 1 MVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAKNERYAFEQVDICDRAALDRVFAQYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI G FI TNI+GT+++LE R +W LS + K FRF ISTDE Sbjct: 61 VVMHLAAESHVDRSIDGPAAFIETNIVGTYLMLEAARHYWQQLSAEAKLAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L + LF+E PY PSSPYSA+KASSD+LV AW TYG P L++NCSNNYGPYHF Sbjct: 121 VYGDLHGTEDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPTLVTNCSNNYGPYHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ +G +GE YNIGG+NE Sbjct: 181 PEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTEGVVGETYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 RKNI++V I LLD L+P + + +LI F++DRPGHD RYAID+ KI+ E+GW P Sbjct: 241 RKNIEVVETICTLLDELVPAKPAGIAQYRDLITFVKDRPGHDMRYAIDAGKIERELGWRP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE ESG+ KTV WYL+N WWR Sbjct: 301 QETFESGIRKTVLWYLNNESWWR 323 >gi|46487618|gb|AAS99159.1| RmlB [Escherichia coli] Length = 362 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 198/346 (57%), Positives = 247/346 (71%), Gaps = 14/346 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EI + + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVINVDKLTYAGNLESLTEIENNERYKFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + QPDAI++ AAESHVDRSI G +FI TNI+GT+ILLEE R +W LS+ Sbjct: 61 DSVAIANIFAHHQPDAIMHLAAESHVDRSITGPADFIETNIVGTYILLEEARKYWLALSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 D+K FRF ISTDEVYG L LF+E Y+PSSPYSA+KASSD+LV A Sbjct: 121 DRKGAFRFHHISTDEVYGDLPHPDEVSSDTILPLFTEQTSYSPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I I G + +YG+G+ +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLIILNAIAGKLLPVYGNGEQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIED 286 RALY V+ KG GE YNIGG+NERKNID+V I +LD LI E LIR++ D Sbjct: 241 RALYEVVTKGVPGETYNIGGHNERKNIDVVKTICRILDELIADKPDGIENFEQLIRYVSD 300 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAID+SKIK ++GW PQE E+G+ KT+ WYL+N WW+ Sbjct: 301 RPGHDLRYAIDASKIKQDLGWVPQETFETGITKTIHWYLNNKEWWQ 346 >gi|149909222|ref|ZP_01897879.1| dTDP-glucose 4,6-dehydratase [Moritella sp. PE36] gi|149807746|gb|EDM67692.1| dTDP-glucose 4,6-dehydratase [Moritella sp. PE36] Length = 363 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/344 (54%), Positives = 245/344 (71%), Gaps = 12/344 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++++ QV+ +D LTYAGNL+S+ S+ + F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHILSETDYQVVNLDSLTYAGNLDSIPATLLSSQYVFECVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + + QPD +++ AAESHVDRSI + F+ TNIIGT+ LLE R++W L+ Sbjct: 61 NKEQVDRVFLQHQPDIVMHLAAESHVDRSIESPNCFVETNIIGTYNLLESARVYWLSLAD 120 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +KK FRF ISTDEV+G L GLF E Y+PSSPYSATKAS+D+LV AW Sbjct: 121 EKKADFRFHHISTDEVFGDLACQGSKESQDGLFVETTAYDPSSPYSATKASADHLVRAWF 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+P L++NCSNNYGPYHFPEKLIP I + G + +YGDG VRDWLYV+DH RA Sbjct: 181 RTYGLPTLITNCSNNYGPYHFPEKLIPHMILNALNGQALPVYGDGLQVRDWLYVDDHARA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRP 288 L LV KG+IGERYNIGG+NE++NID+V + +L+ L+P E LI+F+ DRP Sbjct: 241 LVLVATKGQIGERYNIGGHNEKRNIDVVNSLCSVLEDLVPDKPDGVEHYRDLIQFVNDRP 300 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 GHD RYAID+SKI+ E+GW P+E +G+ KTV WYLDN WW+ Sbjct: 301 GHDLRYAIDASKIQRELGWQPEETFATGIRKTVQWYLDNTAWWQ 344 >gi|254467877|ref|ZP_05081283.1| dTDP-glucose 4,6-dehydratase [beta proteobacterium KB13] gi|207086687|gb|EDZ63970.1| dTDP-glucose 4,6-dehydratase [beta proteobacterium KB13] Length = 352 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/334 (56%), Positives = 243/334 (72%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IVTG AGFIGS +N+ +V+ +DKLTYAGNL +LK + + F+Q DI Sbjct: 1 MSIIVTGAAGFIGSNFVLNWLNNNNEKVVALDKLTYAGNLENLKSVETKPNYVFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I +E QP A+VNFAAESHVDRSI G D+F+ TNIIGT+ LL+E R +++ L++ Sbjct: 61 DSKLIAEIFQEHQPRAVVNFAAESHVDRSIHGPDDFMQTNIIGTYRLLDEARSFFNALNE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K QFRFL +STDEVYG+L F E Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 DAKKQFRFLHVSTDEVYGTLSSTDPAFKETNQYEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGP+HFPEKLIPL I + ++G + +YGDGQ +RDWLYV DH R + VL+ Sbjct: 181 VLTTNCSNNYGPFHFPEKLIPLCILKALQGQDLPIYGDGQQIRDWLYVVDHCRGITTVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAI 296 KG +GE YNIGG NE+ N+++V + LLD L P + S+ E I FI+DRPGHDRRYAI Sbjct: 241 KGVVGETYNIGGWNEKTNLEVVHALCDLLDELKPLDDARSYREQITFIKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D++KI +E+GW P+E E+G+ KTV WYLDN W Sbjct: 301 DATKISNELGWKPEETFETGIRKTVQWYLDNQDW 334 >gi|238755770|ref|ZP_04617102.1| dTDP-glucose 4,6-dehydratase [Yersinia ruckeri ATCC 29473] gi|238705997|gb|EEP98382.1| dTDP-glucose 4,6-dehydratase [Yersinia ruckeri ATCC 29473] Length = 338 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 181/321 (56%), Positives = 231/321 (71%), Gaps = 6/321 (1%) Query: 18 RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAI 77 R+++N V+V+DKLTYAGNL SL ++ + + F QVDICDR + +QPDA+ Sbjct: 2 RHIINATADSVVVVDKLTYAGNLESLATVADNERYDFEQVDICDRAELDRVFAHYQPDAV 61 Query: 78 VNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVY 137 ++ AAESHVDRSI G FI TN++GT+ LLE R +W L+ ++K FRF ISTDEVY Sbjct: 62 MHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQALAAEQKRAFRFHHISTDEVY 121 Query: 138 GSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE 195 G L LF+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHFPE Sbjct: 122 GDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPTLITNCSNNYGPYHFPE 181 Query: 196 KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERK 255 KLIPL I + G + +YG G VRDWLYVEDH RALY V+ +G +GE YNIGG+NERK Sbjct: 182 KLIPLVILNALAGKPLPVYGTGAQVRDWLYVEDHARALYQVVTEGVVGETYNIGGHNERK 241 Query: 256 NIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NI++V I LLD L+P+ + ++ELI +++DRPGHD RYAID+ KI+ E+GW PQE Sbjct: 242 NIEVVETICTLLDELVPQKPAGLAHYSELITYVKDRPGHDMRYAIDAGKIERELGWHPQE 301 Query: 312 NMESGLNKTVCWYLDNNWWWR 332 ESG+ KTV WYL + WW+ Sbjct: 302 TFESGIRKTVNWYLSHTSWWQ 322 >gi|170726037|ref|YP_001760063.1| dTDP-glucose 4,6-dehydratase [Shewanella woodyi ATCC 51908] gi|169811384|gb|ACA85968.1| dTDP-glucose 4,6-dehydratase [Shewanella woodyi ATCC 51908] Length = 363 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/349 (55%), Positives = 244/349 (69%), Gaps = 11/349 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+AL R+L+N+ +V+ +DKLTYAGNL SLK+I + F+ DICD+ Sbjct: 5 ILVTGGAGFIGAALIRFLINETDNRVINLDKLTYAGNLLSLKDIEGDERYHFIHGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + LK FQPD I+N AAESHVDRSI G FI TNI+GTF LLE R + LS +K Sbjct: 65 TLVCQTLKHFQPDFIMNLAAESHVDRSIEGPSAFIETNILGTFSLLEAARSYCLTLSDEK 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRF ISTDEVYG L D G F+E+ PY PSSPYSA+KA+SD+LV AW TY +PV+L Sbjct: 125 RHGFRFHHISTDEVYGELGDTGYFTEESPYLPSSPYSASKAASDHLVRAWSRTYNLPVVL 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYG Y +PEKLIPL I + G + +YGDG+ +RDWLYV+DHVRALY V+ KG Sbjct: 185 TNCSNNYGAYQYPEKLIPLVIMNALSGKPIPIYGDGKQIRDWLYVDDHVRALYCVVTKGE 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTE-------LIRFIEDRPGHDRR 293 +GE YNIGG NE+ N+++V I LL+ L + +YS E LI ++ DRPGHD R Sbjct: 245 VGETYNIGGCNEKTNLEVVTAICELLEELALTNAYSSNEIDGGFSSLITYVTDRPGHDTR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 YAID+ KI E+ W P E+ SGL KTV WYL+N W + + KP N Sbjct: 305 YAIDAGKIARELNWQPMESFNSGLRKTVIWYLENQAWCQSILS--KPQN 351 >gi|56752002|ref|YP_172703.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 6301] gi|81300909|ref|YP_401117.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 7942] gi|56686961|dbj|BAD80183.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 6301] gi|81169790|gb|ABB58130.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 7942] Length = 357 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/328 (56%), Positives = 244/328 (74%), Gaps = 2/328 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGSAL R+L+ L +++ +DKL+YA +L SL+ S+ + F QVD+ Sbjct: 1 MKILITGGAGFIGSALIRHLLTTRLDARIINLDKLSYASDLTSLQPFEDSDRYVFEQVDL 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +QP A+++ AAESHVDRSI FI +NI+GTF LLE R +W LS Sbjct: 61 LDEAALTRIFQTYQPTAVMHLAAESHVDRSIDSPRPFIESNILGTFNLLEAARRYWQELS 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ FRF ISTDEVYGSL + GLF+E Y+P SPYSA+KASSD+LV AW HTYG+P Sbjct: 121 ESEQQTFRFHHISTDEVYGSLGETGLFTEATRYDPRSPYSASKASSDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGP+ FPEKLIP+ I I G+ + +YG+G N+RDWLYVEDH RAL VL Sbjct: 181 VLVTNCSNNYGPWQFPEKLIPVIILNAIAGNPLPIYGNGGNIRDWLYVEDHTRALEQVLL 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+IGE YNIGG NER N+ +V I LLD L P+S S+ + + F+ DRPGHDRRYAID+ Sbjct: 241 KGQIGETYNIGGFNERTNLQVVETICDLLDELKPRSQSYRQQMEFVRDRPGHDRRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 S+I+ E+GW PQE+ E+GL KTVCWYL+ Sbjct: 301 SRIERELGWQPQESFETGLRKTVCWYLN 328 >gi|300692303|ref|YP_003753298.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Ralstonia solanacearum PSI07] gi|299079363|emb|CBJ52035.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Ralstonia solanacearum PSI07] Length = 354 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/332 (56%), Positives = 235/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG +L N ++ +DKLTYAGN +L + + F Q DICD Sbjct: 4 ILVTGGAGFIGGNFVLNWLANPGTDSIVNVDKLTYAGNRKTLAAVERDPRHVFSQTDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S +++P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L D Sbjct: 64 RAALDSLFAQYKPRAVVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAVRAYWGGLDAD 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PV Sbjct: 124 AKAAFRFLHVSTDEVFGSLSSTDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL + Sbjct: 184 LTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREVLAR 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG NE+ N+D+V + LLD L PK+ S+ + I F++DRPGHDRRYAID+ Sbjct: 244 GRLGETYNVGGWNEKTNLDVVHTLCDLLDELKPKATGSYRDQIAFVKDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+GL KTV WYLDN W Sbjct: 304 RKLERELGWKPAETFETGLRKTVQWYLDNQVW 335 >gi|269965939|ref|ZP_06180032.1| dTDP-D-glucose 4,6-dehydratase [Vibrio alginolyticus 40B] gi|269829492|gb|EEZ83733.1| dTDP-D-glucose 4,6-dehydratase [Vibrio alginolyticus 40B] Length = 358 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 253/337 (75%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++ S + F +VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTEDSVVNVDKLTYAGNLESLSDVMDSERYVFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + + +PDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Q Sbjct: 61 DRESLETVFSKHKPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYALLEAARNYWNTLDQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K+QFRF ISTDEVYG L+ LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ESKEQFRFHHISTDEVYGDLEGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWLYVEDH RALY V++ Sbjct: 181 TIITNCSNNYGPYHFPEKLIPLMILNALEGKSLPVYGDGMQIRDWLYVEDHARALYKVVR 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 EGLVGETYNIGGHNEKANIEVVKTICTLLEELVPNKPNGVKEYADLITYVSDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID++KI+ E+GW P+E +SG+ KTV WYL+N WW Sbjct: 301 AIDATKIERELGWKPEETFDSGIRKTVEWYLENKIWW 337 >gi|281354881|ref|ZP_06241375.1| dTDP-glucose 4,6-dehydratase [Victivallis vadensis ATCC BAA-548] gi|281317761|gb|EFB01781.1| dTDP-glucose 4,6-dehydratase [Victivallis vadensis ATCC BAA-548] Length = 358 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/333 (56%), Positives = 236/333 (70%), Gaps = 4/333 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL RYL+ + +V V+DKLTYAGNL SL E+S S+ F F + DICDR Sbjct: 6 ILVTGGAGFIGSALVRYLIRETAERVCVVDKLTYAGNLESLAEVSGSDRFRFERADICDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + EF+PDA+++ AAESHVDRSI +FI TNI+GT+ LLE R +WS L Sbjct: 66 AELDRIFSEFRPDAVMHLAAESHVDRSIDAPGDFIRTNIVGTYTLLEAARNYWSGLPAGA 125 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++FRF ISTDEV+G L G F ED PY PSSPYSA+KASSD+LV AW T+G+P L Sbjct: 126 RERFRFHHISTDEVFGDLKDSDGFFREDTPYMPSSPYSASKASSDHLVRAWFRTFGMPTL 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP FPEKLIPL I ++ + +YGDG VRDWLYVEDH RAL+L + +G Sbjct: 186 VTNCSNNYGPRQFPEKLIPLMILSALDDKPLPVYGDGAQVRDWLYVEDHARALHLAVTRG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 GE YNIGG+N + N+ +V + LLD L P+ S E + F+ DRPGHD RYAID+ Sbjct: 246 VPGETYNIGGHNTKSNLQVVHTLCGLLDELSPRRDGRSRREQVVFVADRPGHDLRYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +KI+ E+GW P+E+ ESGL KTV WYL W Sbjct: 306 AKIQRELGWTPRESFESGLRKTVEWYLAERAGW 338 >gi|85060359|ref|YP_456061.1| dTDP-D-glucose-4,6-dehydratase [Sodalis glossinidius str. 'morsitans'] gi|84780879|dbj|BAE75656.1| dTDP-D-glucose-4,6-dehydratase [Sodalis glossinidius str. 'morsitans'] Length = 357 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/336 (56%), Positives = 234/336 (69%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAGFIGSAL RY++ +VLV+DKLTYAGNL+SL ++ + F + DI D Sbjct: 4 LLITGGAGFIGSALVRYILGATDYRVLVVDKLTYAGNLDSLAPVAGHPHYRFARADIGDG 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L EFQP AI++ AAESHVDRSI G FI TNI GT ILLE R +W L Sbjct: 64 PAMARLLAEFQPYAIMHLAAESHVDRSIDGPAAFIDTNITGTSILLEAAREYWQALPPAA 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF +STDEVYG L D F+E PY PSSPYSA+KA+SD+L AW TYG+PVL Sbjct: 124 RAAFRFHHVSTDEVYGDLPDDGSRFNESSPYAPSSPYSASKAASDHLARAWMRTYGLPVL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++CSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYVEDH RALY V+ +G Sbjct: 184 VTHCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVEDHARALYQVVTRG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHT---ELIRFIEDRPGHDRRYAI 296 R GE Y IGG+NER+NI++V + LL+ A P T +LI +EDRPGHDRRYAI Sbjct: 244 RPGETYTIGGHNERRNIEVVEALCALLEQAGAPHPAGVTAFRQLITLVEDRPGHDRRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+ KI E+GW PQE +SGL KTV WYL + WW+ Sbjct: 304 DAGKIARELGWRPQETFDSGLAKTVQWYLTHREWWQ 339 >gi|91976050|ref|YP_568709.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB5] gi|91682506|gb|ABE38808.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB5] Length = 353 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/334 (55%), Positives = 237/334 (70%), Gaps = 3/334 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGSA+ R L+ +VLV+DKLTYAGNL SL +S S FSF +VDI D Sbjct: 4 KFMITGGAGFIGSAVVRRLIETSDHEVLVVDKLTYAGNLESLAPVSASPKFSFERVDITD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R EF PD +++ AAESHVDRSI G EFI TN++GTF+LL+ W L Sbjct: 64 VEAMRRVFAEFSPDIVMHLAAESHVDRSIDGPGEFIQTNLVGTFVLLQAALNHWRTLPAG 123 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF +STDEV+GSL G F+E+ Y P+SPYSA+KA SD+LV AW HTYG+P++ Sbjct: 124 RKPGFRFHHVSTDEVFGSLGPSGSFNEETAYRPNSPYSASKAGSDHLVRAWHHTYGLPMV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPY FPEKLI L I +EG + +YG G+NVRDWLYVEDH AL LV + G Sbjct: 184 MTNCSNNYGPYQFPEKLIALMIINALEGRPLPVYGTGENVRDWLYVEDHAEALLLVAETG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 +GE YNIGG++ER NI +V I ++D L P + +LI F+ DRPGHD RYAID+ Sbjct: 244 GVGESYNIGGDSERTNISVVRSICRIVDELAPDAAIGPRDKLIEFVVDRPGHDLRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KI+ E+GW P+ + E+GL TV WYLDN WW+ Sbjct: 304 TKIERELGWKPRHSFETGLRHTVQWYLDNMGWWK 337 >gi|257455592|ref|ZP_05620822.1| dTDP-glucose 4,6-dehydratase [Enhydrobacter aerosaccus SK60] gi|257447058|gb|EEV22071.1| dTDP-glucose 4,6-dehydratase [Enhydrobacter aerosaccus SK60] Length = 355 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/334 (57%), Positives = 252/334 (75%), Gaps = 4/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ RYL+N+ +VL +DKLTYAGNL SL+ +S + + FL DICD+ Sbjct: 6 ILVTGGAGFIGSAVVRYLINNTDNRVLNVDKLTYAGNLESLETVSNNPRYQFLHADICDK 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A ++FQP+ +++ AAESHVDRSI G +FI TNIIGT+ LLE R +W ++DK Sbjct: 66 SAMTKAFQDFQPNIVMHLAAESHVDRSIDGPMDFIQTNIIGTYNLLEVARNYWQNFTEDK 125 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F+F ISTDEVYG L+ + LF+E Y+PSSPYSA+KASSD+LV AW TYG+P++ Sbjct: 126 KSSFKFHHISTDEVYGDLEGTEDLFTEATSYSPSSPYSASKASSDHLVRAWHRTYGLPIV 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG+ +RDWLYVEDH ALYLV Sbjct: 186 ITNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGDGKQIRDWLYVEDHASALYLVATTA 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YNIGG+NE++NID+V I +LD + P++ S+T+ I F++DRPGHD RYAID+ Sbjct: 246 KVGETYNIGGHNEKQNIDVVKTICTILDNIKPRTDGQSYTQQITFVKDRPGHDLRYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI E+GW PQE ESG+ KTV WYL+N W R Sbjct: 306 SKINKELGWQPQETFESGIEKTVEWYLNNLEWCR 339 >gi|83746223|ref|ZP_00943277.1| dTDP-glucose 4,6-dehydratase [Ralstonia solanacearum UW551] gi|207728133|ref|YP_002256527.1| dtdp-glucose 4,6-dehydratase protein [Ralstonia solanacearum MolK2] gi|207744132|ref|YP_002260524.1| dtdp-glucose 4,6-dehydratase protein [Ralstonia solanacearum IPO1609] gi|83727189|gb|EAP74313.1| dTDP-glucose 4,6-dehydratase [Ralstonia solanacearum UW551] gi|206591378|emb|CAQ56990.1| dtdp-glucose 4,6-dehydratase protein [Ralstonia solanacearum MolK2] gi|206595536|emb|CAQ62463.1| dtdp-glucose 4,6-dehydratase protein [Ralstonia solanacearum IPO1609] Length = 354 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/333 (56%), Positives = 234/333 (70%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG +L N V+ +DKLTYAGN +L + F Q DIC Sbjct: 3 HILVTGGAGFIGGNFVLNWLANPGTDSVVNVDKLTYAGNRKTLATVESDPRHVFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S +++P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 63 DRAALDSLFAQYKPRAVVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAARAYWGGLDA 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 DAKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREVLA 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +GR+GE YN+GG NE+ N+++V + LLD L PK+ S+ + I F++DRPGHDRRYAID Sbjct: 243 RGRLGETYNVGGWNEKTNLEVVHTLCDLLDELKPKATGSYRDQIAFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E E+GL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFETGLRKTVQWYLDNQVW 335 >gi|313667390|ref|YP_004047674.1| dTDP-glucose 4,6-dehydratase [Neisseria lactamica ST-640] gi|313004852|emb|CBN86278.1| dTDP-glucose 4,6-dehydratase [Neisseria lactamica 020-06] Length = 360 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/331 (55%), Positives = 239/331 (72%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ S ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADSPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + ++ Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYRRQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPY+A+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYAASKASSDHLVRAWQRTYGLPAI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH ALY ++ KG Sbjct: 189 VSNCSNNYGPRQFPEKLIPLTILNALSGKPLPVYGDGMQIRDWLFVEDHAHALYQLVSKG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 GE YNIGG+NE+ NI++V I LL+ L P+ + + +LI F+ DRPGHD RYAI Sbjct: 249 VAGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVPDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI E+GW PQE ESG+ KTV WYLDN Sbjct: 309 DAAKIGRELGWKPQETFESGIRKTVQWYLDN 339 >gi|238784750|ref|ZP_04628753.1| dTDP-glucose 4,6-dehydratase [Yersinia bercovieri ATCC 43970] gi|238714346|gb|EEQ06355.1| dTDP-glucose 4,6-dehydratase [Yersinia bercovieri ATCC 43970] Length = 339 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/323 (56%), Positives = 233/323 (72%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R++++ V+V+DKLTYAGNL SL +++S ++F QVDICDR + ++QPD Sbjct: 1 MVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAKSERYAFEQVDICDRAELDRVFAQYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS + K FRF ISTDE Sbjct: 61 VVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLSAEAKLAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHF Sbjct: 121 VYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ +G +GE YNIGG+NE Sbjct: 181 PEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTEGVVGETYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R+NI++V I LLD L+P + + +LI F++DRPGHD RYAID+ KI+ E+GW P Sbjct: 241 RRNIEVVETICALLDELVPAKPAGIAHYRDLITFVKDRPGHDMRYAIDAGKIERELGWRP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE ESG+ KTV WYL+N WWR Sbjct: 301 QETFESGIRKTVLWYLNNESWWR 323 >gi|209964145|ref|YP_002297060.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum centenum SW] gi|209957611|gb|ACI98247.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum centenum SW] Length = 363 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/336 (54%), Positives = 236/336 (70%), Gaps = 2/336 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LIVTGGAGFIGS + R L+ + + +DKLTYA + +L E+S S + F ++DIC Sbjct: 1 MKLIVTGGAGFIGSCVIRTLIRTTDVSICNVDKLTYAASPEALAEVSGSPRYRFERLDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + QPDA+++ AAESHVDRSI FI TN++GT+ LL + +W L + Sbjct: 61 DGPGLAALFEREQPDAVMHLAAESHVDRSIDDPAAFIMTNLVGTYTLLAASTAYWRGLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FR+ +STDEVYGSL D G F+E PY P+SPYSA+KA SD+L AW HTYG+PV Sbjct: 121 ARRASFRYHHVSTDEVYGSLGDVGAFTETTPYAPNSPYSASKAGSDHLARAWFHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+SNCSNNYGP+ FPEKLIPL I I G + +YG G NVRDWL+VEDH RAL+ VL + Sbjct: 181 LVSNCSNNYGPFQFPEKLIPLMILNGIAGRPLPVYGRGMNVRDWLHVEDHARALWQVLTR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YNIGGN ER+NID+V I LLD L+P S LI + DRPGHD RYAID+ Sbjct: 241 GQPGESYNIGGNAERRNIDVVHAICDLLDELVPDPQGSRRRLITHVSDRPGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 S+I+ ++GW PQE E+GL TV WYL N WWRP+ Sbjct: 301 SRIRRDLGWVPQETFETGLRATVEWYLANEAWWRPI 336 >gi|309780786|ref|ZP_07675527.1| dTDP-glucose 4,6-dehydratase [Ralstonia sp. 5_7_47FAA] gi|308920468|gb|EFP66124.1| dTDP-glucose 4,6-dehydratase [Ralstonia sp. 5_7_47FAA] Length = 354 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 236/332 (71%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG +L + ++ +DKLTYAGN +L + Q + F Q DICD Sbjct: 4 ILVTGGAGFIGGNFVLNWLADPSADGIVNVDKLTYAGNRKTLAAVEQDSRHVFSQTDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +WS L + Sbjct: 64 RAALDRLFAQYRPRAVVHFAAESHVDRSIHGPGEFIQTNIVGTFTLLEAARAYWSGLDDE 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PV Sbjct: 124 AKAAFRFLHVSTDEVFGSLGPTDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ L + Sbjct: 184 LTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREALAR 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG NE+ N+D+V+ + LLD L PK+ S+ + I F++DRPGHDRRYAID+ Sbjct: 244 GRLGETYNVGGWNEKTNLDVVYTLCDLLDELKPKAAGSYRDQITFVKDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+GL KTV WYLDN W Sbjct: 304 RKLERELGWKPAETFETGLRKTVQWYLDNQAW 335 >gi|296315139|ref|ZP_06865080.1| dTDP-glucose 4,6-dehydratase [Neisseria polysaccharea ATCC 43768] gi|296837944|gb|EFH21882.1| dTDP-glucose 4,6-dehydratase [Neisseria polysaccharea ATCC 43768] Length = 360 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 180/336 (53%), Positives = 244/336 (72%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F + DICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFERADICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELNRVFAQYRPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L L +E PY PS+PY+A+KASSD+LV AW TYG+P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLSAETAPYAPSNPYAASKASSDHLVRAWQRTYGLPAI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLTILNALGGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F+ DRPGHD RYAI Sbjct: 249 VVGETYNIGGHNEKVNIEVVKTICALLEELVPEKPAGVARYEDLITFVPDRPGHDVRYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ ++GW P E ESG+ KTV WYLDN WW+ Sbjct: 309 DAAKIRRDLGWQPLETFESGIRKTVQWYLDNKTWWQ 344 >gi|296136997|ref|YP_003644239.1| dTDP-glucose 4,6-dehydratase [Thiomonas intermedia K12] gi|295797119|gb|ADG31909.1| dTDP-glucose 4,6-dehydratase [Thiomonas intermedia K12] Length = 354 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 233/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TG AGFIG+ + + VLV+D LTYAGNL SL ++ + F +VDICDR Sbjct: 2 IFLTGAAGFIGANFVHHWLGQKDEPVLVLDALTYAGNLESLAPVASDPRYHFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + +P A+++FAAESHVDRSI G +FI TN+ GTF LLE TR +W+ L + Sbjct: 62 PAVAALLAQHRPRALLHFAAESHVDRSIHGPGDFIRTNVQGTFELLEATRAYWAALPAPE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL F+E PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGSLSPTDPAFTETTPYAPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + + +YGDGQNVRDWLYV+DH RA+ VL+ G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIHNALADKSLPVYGDGQNVRDWLYVQDHCRAIARVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE KN+D+V + LLD L PK S+ I F+ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGCNEVKNLDVVHTLCDLLDQLRPKMDGSSYRAQITFVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW PQE +GL KTV WYLDN W Sbjct: 302 RKIERELGWTPQETFATGLRKTVQWYLDNPDW 333 >gi|17545401|ref|NP_518803.1| dTDP-glucose 4,6-dehydratase [Ralstonia solanacearum GMI1000] gi|17427693|emb|CAD14212.1| probable dtdp-glucose 4,6-dehydratase protein [Ralstonia solanacearum GMI1000] Length = 354 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/333 (56%), Positives = 234/333 (70%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG +L N V+ +DKLTYAGN +L I F Q DIC Sbjct: 3 HILVTGGAGFIGGNFVLNWLANPGADGVVNVDKLTYAGNRKTLAAIEHDPRHIFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S + +P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 63 DRAALDSLFAQHKPRAVVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAVRAYWGGLDA 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 DAKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREVLA 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +GR+GE YN+GG NE+ N+++V+ + LLD L PK+ S+ + I F++DRPGHDRRYAID Sbjct: 243 RGRLGETYNVGGWNEKTNLEVVYTLCDLLDELKPKATGSYRDQIAFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E E+GL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFETGLRKTVQWYLDNQVW 335 >gi|157368414|ref|YP_001476403.1| dTDP-glucose 4,6-dehydratase [Serratia proteamaculans 568] gi|157320178|gb|ABV39275.1| dTDP-glucose 4,6-dehydratase [Serratia proteamaculans 568] Length = 355 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/337 (58%), Positives = 242/337 (71%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ + VLV+DKLTYAGNL SL ++ + +SF QVDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIEATQDSVLVLDKLTYAGNLESLSVVADNPRYSFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD I++ AAESHVDRSI G FI TN++GT+ +LE R +W L Sbjct: 63 RAALDRVFAEYQPDVIMHLAAESHVDRSIDGPAAFIETNVVGTYTMLEAARHYWQPLDAA 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKQSFRFHHISTDEVYGDLHGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWLYVEDH RALY V+ + Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQVRDWLYVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LL+ L P E LI +++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNERKNIEVVQTICDLLEELAPNKPQGVEKYRDLITYVKDRPGHDMRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 303 IDAGKIDRELGWRPQETFESGIRKTVSWYLNNEIWWR 339 >gi|300704904|ref|YP_003746507.1| dtdp-glucose 4,6 dehydratase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] gi|299072568|emb|CBJ43918.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] Length = 354 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/333 (56%), Positives = 234/333 (70%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG +L N ++ +DKLTYAGN +L + F Q DIC Sbjct: 3 HILVTGGAGFIGGNFVLNWLANPGTDSIVNVDKLTYAGNRKTLATVESDPRHVFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S +++P A+V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 63 DRAALDSLFAQYKPRAVVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAARAYWGGLDA 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K FRFL +STDEV+GSL FSE PY P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 DAKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCAAIREVLA 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +GR+GE YN+GG NE+ N+++V + LLD L PK+ S+ + I F++DRPGHDRRYAID Sbjct: 243 RGRLGETYNVGGWNEKTNLEVVHTLCDLLDELKPKATGSYRDQIAFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E E+GL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFETGLRKTVQWYLDNQVW 335 >gi|301154916|emb|CBW14379.1| dTDP-glucose 4,6-dehydratase [Haemophilus parainfluenzae T3T1] Length = 337 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/333 (54%), Positives = 244/333 (73%), Gaps = 6/333 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGG GFIGSAL RY++N + V+ IDKLTYA N ++L+E+ + ++F QVDICD Sbjct: 4 RILITGGFGFIGSALIRYIINQTQDSVINIDKLTYAANQSALEEVENNPRYTFEQVDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 64 LKAIESVFEKYQPDAVMHLAAESHVDRSITGAADFIQTNIVGTYALLEVAKNYWHTLDEA 123 Query: 122 KKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+PV Sbjct: 124 KKSAFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASDHLVQAWHRTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++N SNNYG Y EKLIPL I+ + G + +YGDG +RDWL+VEDHV+ALYLVL K Sbjct: 184 IITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGLQIRDWLFVEDHVQALYLVLTK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRYA 295 GR+GE YNIGGN E+ N++++ I LL+ L P +H +LI F++DRPGHD RY+ Sbjct: 244 GRVGENYNIGGNCEKTNLEVIKTICQLLEELAPNKPNHIKHYGDLITFVKDRPGHDVRYS 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D SKI +E+GW Q E GL +TV WYL+NN Sbjct: 304 LDCSKIHAELGWQSQITFEQGLRQTVKWYLENN 336 >gi|238750660|ref|ZP_04612159.1| dTDP-glucose 4,6-dehydratase [Yersinia rohdei ATCC 43380] gi|238711050|gb|EEQ03269.1| dTDP-glucose 4,6-dehydratase [Yersinia rohdei ATCC 43380] Length = 339 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/323 (56%), Positives = 234/323 (72%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R+++N V+V+DKLTYAGNL SL ++QS+ ++F QVDIC R + ++QPD Sbjct: 1 MVRHIINSTSDSVVVVDKLTYAGNLESLAVVAQSDRYAFEQVDICSRAELDRVFAQYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI G FI TN++GT+ +LE R +W LS + K FRF ISTDE Sbjct: 61 VVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQPLSAEAKLAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHF Sbjct: 121 VYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I + G + +YG+G VRDWL+VEDH RALY V+ +G +GE YNIGG+NE Sbjct: 181 PEKLIPLVILNALAGKPLPVYGNGAQVRDWLFVEDHARALYQVVTEGVVGETYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 RKNI++V I LLD L+P+ + + +LI +++DRPGHD RYAID+ KI+ E+GW P Sbjct: 241 RKNIEVVETICSLLDELVPEKPAGIAHYRDLITYVKDRPGHDMRYAIDAGKIERELGWRP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE ESG+ KTV WYL+N WWR Sbjct: 301 QETFESGIRKTVLWYLNNESWWR 323 >gi|585828|sp|P37761|RFBB_NEIGO RecName: Full=dTDP-glucose 4,6-dehydratase gi|520896|emb|CAA83652.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae] gi|1333793|emb|CAA79718.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae] Length = 346 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 242/331 (73%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDR+I A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA++D+LV AW TY +P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ N+++V I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339 >gi|270264237|ref|ZP_06192504.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera 4Rx13] gi|270041886|gb|EFA14983.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera 4Rx13] Length = 357 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/337 (57%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ + V+V+DKLTYAGNL SL I+ + +SF QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIEATQDSVMVVDKLTYAGNLESLSVIADNERYSFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QPD I++ AAESHVDRSI G FI TN++GT+ +LE R +W L + Sbjct: 65 RTALDRVFAQYQPDVIMHLAAESHVDRSIDGPAAFIETNVVGTYTMLEAARHYWHPLDAE 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF ISTDEVYG L LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 RKQNFRFHHISTDEVYGDLHGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWLYVEDH RALY V+ + Sbjct: 185 IVTNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQVRDWLYVEDHARALYQVVTE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYA 295 G +GE YNIGG+NERKNI++V I LL+ L P E LI +++DRPGHD RYA Sbjct: 245 GVVGETYNIGGHNERKNIEVVHTICDLLEELAPNKPQGIEKYRDLITYVKDRPGHDMRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI E+GW PQE ESG+ KTV WYL+N WWR Sbjct: 305 IDAGKIDRELGWRPQETFESGIRKTVSWYLNNETWWR 341 >gi|94311667|ref|YP_584877.1| dTDP-glucose 4,6-dehydratase [Cupriavidus metallidurans CH34] gi|93355519|gb|ABF09608.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding protein [Cupriavidus metallidurans CH34] Length = 354 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/333 (57%), Positives = 235/333 (70%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ +L V+ +DKLTYAGN +L + + F Q DIC Sbjct: 3 HILVTGGAGFIGANFVLNWLAQPGADSVVNVDKLTYAGNRKTLASLDGDSRHVFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + L E +P AIV+FAAESHVDRSI G EFI TNI+GTF LLE R +W+ L Sbjct: 63 DRDALDRLLAEHKPRAIVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAVRAYWNGLDA 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEV+GSL FSE Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 EAKAAFRFLHVSTDEVFGSLGPADPQFSETTAYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCSAIREVLA 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +GR+GE YN+GG NE N+D+V I LLD L PK+ S+++ I F++DRPGHDRRYAID Sbjct: 243 RGRVGETYNVGGWNEMTNLDVVHTICSLLDQLKPKAAGSYSDQINFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E ESGL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFESGLRKTVQWYLDNQPW 335 >gi|257792902|gb|ACV67279.1| RmlB [Escherichia coli] Length = 361 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/340 (56%), Positives = 244/340 (71%), Gaps = 10/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S + F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DVAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAVRNYWSALDG 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L + LF+E Y PSSPYS++KASSD+LV A Sbjct: 121 DKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSSSKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RALY V+ +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGH Sbjct: 241 RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 301 DRRYAIDAEKIGRELGWKPQETFESGIRKTVEWYLSNTKW 340 >gi|117924705|ref|YP_865322.1| dTDP-glucose 4,6-dehydratase [Magnetococcus sp. MC-1] gi|117608461|gb|ABK43916.1| dTDP-glucose 4,6-dehydratase [Magnetococcus sp. MC-1] Length = 354 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 232/330 (70%), Gaps = 1/330 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS L R LV + V+++D LTY+GNL SL ++ + F+Q DICD Sbjct: 3 KVLVTGGAGFIGSELVRQLVTQAECSVVMVDLLTYSGNLASLAPVAARPNYRFVQADICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+V+ AAESHVDRSI G F+ TN++GT +LLE R +W + Sbjct: 63 RGAMSQLFVQEQPDAVVHLAAESHVDRSIDGPLTFVQTNVMGTAVLLESARAYWVQTAPA 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L ++GLF+E PY PSSPYSA+KA+SD+LV AW TYG+P L Sbjct: 123 KQQTFRFLHVSTDEVYGALGEQGLFTEQTPYAPSSPYSASKAASDHLVRAWYTTYGLPTL 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPY FPEKLIPL I + G + +YG G NVRDWLYV DH RAL VL +G Sbjct: 183 ITNCSNNYGPYQFPEKLIPLMILNALAGKPLPVYGQGSNVRDWLYVADHARALRQVLAQG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 ++G+ YNIGG ER N+ +V + LLD L P+ + LI F++DRPGHD RYAID+SK Sbjct: 243 QVGQTYNIGGGAERSNLTVVQTLCTLLDELQPREKPYASLIAFVQDRPGHDFRYAIDASK 302 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I ++GW P + E GL +TV WYL + W Sbjct: 303 ISEQLGWQPTVSFEQGLRETVKWYLQHPQW 332 >gi|83950201|ref|ZP_00958934.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM] gi|83838100|gb|EAP77396.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM] Length = 349 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/335 (54%), Positives = 238/335 (71%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ R V +V+ +D LTYA L+++ E++QS + F VDI Sbjct: 1 MRILVTGGAGFIGSAVVRRAVAQGH-EVINLDALTYAACLDNVAEVAQSPNYRFEHVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++ +P+A+++ AAESHVDRSI G EF+ TN+ GT +LE R W Q Sbjct: 60 DRAALERVFRDHKPEAVMHLAAESHVDRSIDGPAEFVETNVTGTCNMLEAARGHWE--RQ 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEV+GSL D+GLF+ED PY+P SPYSA+KA+SD+LV AW TYG+P+ Sbjct: 118 GRPEGFRFHHISTDEVFGSLGDEGLFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKL+P+ I +EG + +YG G NVRDWLYVEDH AL V++K Sbjct: 178 VMTNCSNNYGPYHFPEKLVPVVIINALEGREIPVYGAGANVRDWLYVEDHAEALLQVVQK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG ER+NID+V I +LD PK S+ E I F+ DRPGHD RYAID+ Sbjct: 238 GAVGRSYNIGGEGERRNIDLVRHICAVLDDRRPKDTSYAEQITFVADRPGHDHRYAIDAR 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+GW P +E G+ +TV WYL N WWRPL Sbjct: 298 RIRDELGWRPSVTVEEGIARTVDWYLANEAWWRPL 332 >gi|32170824|gb|AAP57700.1| dTDP-D-glucose-4,6-dehydratase [Sphingomonas elodea] Length = 353 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/336 (54%), Positives = 241/336 (71%), Gaps = 6/336 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGG GFIGSA+ R+LV +V+ +DKLTYAGN SL I + + F+ DI D Sbjct: 6 FLVTGG-GFIGSAVVRHLVRQ-GARVINLDKLTYAGNPASLTAIENAPNYRFVHADIADT 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L+E Q D +++ AAESHVDRSI G EFI TN++GTF LL+ +W L +K Sbjct: 64 ATILPLLREEQVDVVMHLAAESHVDRSIDGPGEFIETNVVGTFKLLQSALQYWRELEGEK 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEV+G L D G+F+E+ PY+PSSPYSA+KA+SD+LV AWGHTYG+PV+ Sbjct: 124 REGFRFHHISTDEVFGDLPFDSGIFTEETPYDPSSPYSASKAASDHLVRAWGHTYGLPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGP+HFPEKLIPL I +EG + +YG G+N+RDWLYV+DH +AL + G Sbjct: 184 LSNCSNNYGPFHFPEKLIPLTILNALEGKPLPVYGKGENIRDWLYVDDHAKALATIATTG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 ++G+ YN+GG NER N+ +V I LLD IP ELI F+ DRPGHDRRYAID+ Sbjct: 244 KVGQSYNVGGRNERTNLQVVETICDLLDQRIPLADGRKRRELITFVTDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW +EN ++G+ T+ WYL+N WWW P+ Sbjct: 304 TKLETELGWKAEENFDTGIAATIDWYLENEWWWGPI 339 >gi|59802213|ref|YP_208925.1| hypothetical protein NGO1897 [Neisseria gonorrhoeae FA 1090] gi|194099850|ref|YP_002002987.1| RfbB [Neisseria gonorrhoeae NCCP11945] gi|240015151|ref|ZP_04722064.1| RfbB [Neisseria gonorrhoeae DGI18] gi|240017599|ref|ZP_04724139.1| RfbB [Neisseria gonorrhoeae FA6140] gi|240081743|ref|ZP_04726286.1| RfbB [Neisseria gonorrhoeae FA19] gi|240114019|ref|ZP_04728509.1| RfbB [Neisseria gonorrhoeae MS11] gi|240118976|ref|ZP_04733038.1| RfbB [Neisseria gonorrhoeae PID1] gi|240122222|ref|ZP_04735184.1| RfbB [Neisseria gonorrhoeae PID24-1] gi|240124512|ref|ZP_04737468.1| RfbB [Neisseria gonorrhoeae PID332] gi|254494777|ref|ZP_05107948.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae 1291] gi|260439484|ref|ZP_05793300.1| RfbB [Neisseria gonorrhoeae DGI2] gi|268597841|ref|ZP_06132008.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae FA19] gi|268600085|ref|ZP_06134252.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae MS11] gi|268604690|ref|ZP_06138857.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID1] gi|268683146|ref|ZP_06150008.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID332] gi|291042718|ref|ZP_06568459.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae DGI2] gi|293398256|ref|ZP_06642461.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae F62] gi|59719108|gb|AAW90513.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae FA 1090] gi|193935140|gb|ACF30964.1| RfbB [Neisseria gonorrhoeae NCCP11945] gi|226513817|gb|EEH63162.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae 1291] gi|268551629|gb|EEZ46648.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae FA19] gi|268584216|gb|EEZ48892.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae MS11] gi|268588821|gb|EEZ53497.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID1] gi|268623430|gb|EEZ55830.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID332] gi|291013152|gb|EFE05118.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae DGI2] gi|291611519|gb|EFF40589.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae F62] Length = 346 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 178/331 (53%), Positives = 242/331 (73%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDR+I A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA++D+LV AW TY +P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ N++++ I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKTNLEVIKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339 >gi|238794279|ref|ZP_04637892.1| dTDP-glucose 4,6-dehydratase [Yersinia intermedia ATCC 29909] gi|238726363|gb|EEQ17904.1| dTDP-glucose 4,6-dehydratase [Yersinia intermedia ATCC 29909] Length = 339 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/323 (56%), Positives = 230/323 (71%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R++++ V+V+DKLTYAGNL SL ++ S ++F QVDICDR + +QPD Sbjct: 1 MVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQVDICDRAELDRVFAHYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS + K FRF ISTDE Sbjct: 61 MVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLSAEAKQAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHF Sbjct: 121 VYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I + G + +YG+G VRDWLYVEDH RALY V+ +G +GE YNIGG+NE Sbjct: 181 PEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTEGAVGETYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 RKNI++V + LLD L+P + E LI +++DRPGHD RYAID+ KI+ E+GW P Sbjct: 241 RKNIEVVETLCTLLDELVPAKPAGIEHYRDLITYVKDRPGHDMRYAIDAGKIERELGWRP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE ESG+ KT+ WYL+N WWR Sbjct: 301 QETFESGIRKTLLWYLNNESWWR 323 >gi|239997868|ref|ZP_04717792.1| RfbB [Neisseria gonorrhoeae 35/02] gi|240124615|ref|ZP_04737501.1| RfbB [Neisseria gonorrhoeae SK-92-679] gi|268593714|ref|ZP_06127881.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae 35/02] gi|268683182|ref|ZP_06150044.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae SK-92-679] gi|268547103|gb|EEZ42521.1| dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae 35/02] gi|268623466|gb|EEZ55866.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae SK-92-679] gi|317165318|gb|ADV08859.1| hypothetical protein NGTW08_1904 [Neisseria gonorrhoeae TCDC-NG08107] Length = 346 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 178/331 (53%), Positives = 242/331 (73%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRNSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDR+I A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA++D+LV AW TY +P + Sbjct: 129 REAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ N++++ I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKTNLEVIKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339 >gi|329897707|ref|ZP_08272185.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium IMCC3088] gi|328921054|gb|EGG28466.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium IMCC3088] Length = 354 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 242/337 (71%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+L+ D + V+ +DKLTYAGNL SL+EI S L++F QVDIC Sbjct: 1 MKVLVTGGAGFIGSAVVRHLIRDKQYGVVNVDKLTYAGNLESLREIDGSPLYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + PD +++ AAESHVDRSI G FI TN++GT+ +LE R +W L Sbjct: 61 NLAELQRVFADHCPDKVMHLAAESHVDRSIDGPSAFIETNMVGTYCMLEAARHYWLSLVG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ FRF ISTDEVYG L LF+E Y PSSPYSA+KA SD+LV AW TYG+P Sbjct: 121 EARESFRFHHISTDEVYGDLHGTDDLFTETTHYAPSSPYSASKAGSDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPYHFPEKLIPL I I G + +YG+G +RDWLYVEDH RAL V+ Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLLILNAIHGKTLPVYGEGLQIRDWLYVEDHARALVRVVF 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 G++GE YNIGG+NE++NID+V I +L+ L P+ + +LI + DRPGHD RY Sbjct: 241 DGKVGETYNIGGHNEKRNIDVVHTICDILEDLRPEKPEGVDQYRDLITHVADRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+ W P+E+ ESG+ KTV WYLDN WW Sbjct: 301 AIDASKIQRELDWVPEESFESGIRKTVEWYLDNEAWW 337 >gi|294341173|emb|CAZ89574.1| dTDP-glucose 4,6-dehydratase [Thiomonas sp. 3As] Length = 354 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 232/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TG AGFIG+ + + VLV+D LTYAGNL SL ++ + F Q+DICDR Sbjct: 2 IFLTGAAGFIGANFVHHWLGQKDEPVLVLDALTYAGNLESLAPVASDPRYHFAQLDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L +P A+++FAAESHVDRSI G +FI TN+ GTF LLE R +W+ L + Sbjct: 62 PAVTALLTTHRPRALLHFAAESHVDRSIHGPGDFIRTNVQGTFELLEAIRAYWAGLPAPE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL F+E PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGSLSPTDPAFTETTPYAPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV+DH RA+ VL+ G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIHNALAGKPLPVYGDGQNVRDWLYVQDHCRAIARVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE KN+D+V + LLD L PK S+ I F+ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGCNEVKNLDVVHTLCDLLDQLRPKMDGSSYRAQITFVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW PQE +GL KTV WYLDN W Sbjct: 302 RKIERELGWTPQETFATGLRKTVQWYLDNPDW 333 >gi|217978848|ref|YP_002362995.1| dTDP-glucose 4,6-dehydratase [Methylocella silvestris BL2] gi|217504224|gb|ACK51633.1| dTDP-glucose 4,6-dehydratase [Methylocella silvestris BL2] Length = 356 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/333 (54%), Positives = 235/333 (70%), Gaps = 3/333 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R ++ + VLV+DKLTYAGNL+SLK ++ + F++ DI D Sbjct: 8 RILVTGGAGFIGSAVVREIIGETPHSVLVVDKLTYAGNLDSLKPVAADPRYDFIRADIVD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++S +FQPD +++ AAESHVDRSI G EFI TN++GTF LL+ T +W L Sbjct: 68 APRMQSVFAQFQPDIVMHLAAESHVDRSIDGPGEFIQTNVVGTFTLLQATLGYWRGLPAA 127 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRF ISTDEV+GSL +G F E Y P+SPYSA+KA+SD+LV AW HTYG+P + Sbjct: 128 RQTSFRFHHISTDEVFGSLGPEGFFIETTAYCPNSPYSASKAASDHLVNAWRHTYGLPTV 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGPYHFPEKLIPL I +EG + +YG G N+RDWLYVEDH RAL V +G Sbjct: 188 LSNCSNNYGPYHFPEKLIPLTIINALEGKPLPVYGAGANIRDWLYVEDHARALLTVATQG 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 +G Y IGG+NE+ N+D+V I L+D L P L+ F+ DRPGHD RYAID Sbjct: 248 AVGGSYCIGGHNEKTNLDVVHAICALVDELAPDRAIGPRAGLVSFVSDRPGHDLRYAIDP 307 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SKI ++GW P+E ESGL +TV WYL++ WW Sbjct: 308 SKIAVDLGWRPRETFESGLRQTVQWYLEHRDWW 340 >gi|213616299|ref|ZP_03372125.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 320 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 179/306 (58%), Positives = 223/306 (72%), Gaps = 6/306 (1%) Query: 35 TYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD 94 TYAGNL SL ++QS+ F+F +VDICDR + +++QPD++++ AAESHVDRSI G Sbjct: 1 TYAGNLMSLASVAQSDRFAFEKVDICDRASLEQVFQQYQPDSVMHLAAESHVDRSIDGPA 60 Query: 95 EFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYN 152 FI TNI+GT+ LLE R +WS L D K FRF ISTDEVYG L F+E PY Sbjct: 61 AFIETNIVGTYTLLEAARAYWSALDADAKAAFRFHHISTDEVYGDLHTADDFFTETTPYA 120 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF 212 PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I + G + Sbjct: 121 PSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLP 180 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG+GQ +RDWLYVEDH RALY V+ G +GE YNIGG+NERKN+D+V I LL+ L P Sbjct: 181 VYGNGQQIRDWLYVEDHARALYHVVTNGAVGETYNIGGHNERKNLDVVRTICALLEELAP 240 Query: 273 KS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + ++ +LI F++DRPGHD RYAID+SKI E+GW PQE ESG+ KTV WYL N Sbjct: 241 QKPQGVANYHDLITFVDDRPGHDLRYAIDASKIARELGWTPQETFESGMRKTVQWYLANE 300 Query: 329 WWWRPL 334 WW+P+ Sbjct: 301 AWWKPV 306 >gi|238026391|ref|YP_002910622.1| DTDP-glucose 4,6-dehydratase [Burkholderia glumae BGR1] gi|237875585|gb|ACR27918.1| DTDP-glucose 4,6-dehydratase [Burkholderia glumae BGR1] Length = 353 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 239/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSGEAVLNVDKLTYAGNLGTLKSLQGNPAHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L E +P AI++FAAESHVDRSI G EF+ TN++GTF LLE R +W+ L D Sbjct: 62 AAIDALLAEHRPRAILHFAAESHVDRSIHGPAEFVQTNVVGTFTLLEAARQYWNTLEADA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSASDPQFSETTPYAPNSPYSATKAGSDHLVRAYFHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD L PK+ S+ E + F+ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHVLCDLLDTLRPKAAGSYREQVTFVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+G+ KTV WYLDN W + +Y W +N Sbjct: 302 KLERELGWKPAETFETGMEKTVRWYLDNQPWAAEV-----ASGEYRNWVEMN 348 >gi|121533497|ref|ZP_01665325.1| dTDP-glucose 4,6-dehydratase [Thermosinus carboxydivorans Nor1] gi|121308056|gb|EAX48970.1| dTDP-glucose 4,6-dehydratase [Thermosinus carboxydivorans Nor1] Length = 354 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 242/332 (72%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTGGAGFIG+ R++++ + ++ +DKLTYAGNL+SL ++ + F++ I D Sbjct: 4 IFVTGGAGFIGTNFVRHMLSTYQDTTIINLDKLTYAGNLDSLADVLNNPRHIFVKGGIED 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L +++P A+VNFAAESHVDRSI G FI TNI+GTF LLE R +W L++ Sbjct: 64 RSLVEYLLAQYRPQAVVNFAAESHVDRSIDGPAAFIQTNIVGTFQLLEAVRAYWQALAEV 123 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K+ FRFL +STDEVYGSL +G F+E PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 124 EKENFRFLHVSTDEVYGSLGPEGYFTEATPYAPNSPYSASKAASDHLVRAWHHTYGLPVL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWLYV DH RA+ VL+ G Sbjct: 184 TTNCSNNYGPYQFPEKLIPLMILNALDGKPLPVYGDGRNVRDWLYVLDHCRAIDTVLRYG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R GE YNIGGNNE+ NI++V I +LD + P+ S+ I F++DRPGHDRRYAID+ Sbjct: 244 RPGETYNIGGNNEKANIEVVETICDILDEMQPRPDGSSYRTQITFVQDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKIK E+GW PQE +G+ KTV WYL N W Sbjct: 304 SKIKRELGWQPQETFATGIRKTVEWYLANRAW 335 >gi|254489386|ref|ZP_05102589.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. GAI101] gi|214041893|gb|EEB82533.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. GAI101] Length = 345 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/335 (54%), Positives = 236/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R V V+ +D LTYA L ++ ++ S L++F Q DIC Sbjct: 1 MKLLVTGGAGFIGSAVVRLAVAQGH-GVVNLDALTYAACLENVASVADSPLYAFEQADIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI G FI TNI GT+ LLE R +W Sbjct: 60 DRAALDRIFADHQPDAVMHLAAESHVDRSIDGPGAFIQTNITGTYTLLEAARAYWQ--GA 117 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D+FRF ISTDEV+GSL G F+ED PY+P SPYSA+KA+SD+LV AWG TYG+P+ Sbjct: 118 GKPDRFRFHHISTDEVFGSLGPTGQFTEDTPYDPRSPYSASKAASDHLVRAWGETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKL+P+ I + + G + +YGDG NVRDWL+VEDH AL VL K Sbjct: 178 IMTNCSNNYGPFHFPEKLVPVVILKALAGQPIPVYGDGANVRDWLFVEDHADALLTVLTK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++G YNIGG NE N+++V I LLD P+ H +LI F+ DRPGHD+RYAID + Sbjct: 238 GKLGRSYNIGGENEVSNLELVKMICALLDDRHPEGAPHADLITFVTDRPGHDQRYAIDPA 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+SE+ W P +E GL +TV WYL+N WWR L Sbjct: 298 RIRSELNWKPSVTVEEGLARTVDWYLENEDWWRAL 332 >gi|53804360|ref|YP_113744.1| dTDP-glucose 4,6-dehydratase [Methylococcus capsulatus str. Bath] gi|53758121|gb|AAU92412.1| dTDP-glucose 4,6-dehydratase [Methylococcus capsulatus str. Bath] Length = 357 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/331 (56%), Positives = 236/331 (71%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIG + ++V+ +D LTY+GNL +L E+ + F+ I DR Sbjct: 4 LLVTGGAGFIGGNFVLRQLRRGGVEVVNLDALTYSGNLRTLAEVEDNPNHDFVLGSIGDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L+ +QPDA+VNFAAE+HVDRSI G D F+ TN+IGTF LLE TR +W L ++ Sbjct: 64 ELVEYLLERYQPDAVVNFAAETHVDRSIDGPDAFVHTNVIGTFELLEATRWYWRQLDGER 123 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRFL +STDEVYG+L G F+E+ PY P+SPYSA+KA SD+LV A+ HTYG+PVL Sbjct: 124 RKAFRFLHVSTDEVYGTLGATGKFTEETPYRPNSPYSASKAGSDHLVRAYFHTYGLPVLT 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPY FPEKLIPL I ++G + +YG G NVRDWLYVEDH RA+ VL +GR Sbjct: 184 TNCSNNYGPYQFPEKLIPLMIDHALQGLPLPVYGAGTNVRDWLYVEDHCRAIETVLARGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GGNNE+ NI++V I LLD +P S H +LIRF++DRPGHD RYAID+ Sbjct: 244 PGEVYNVGGNNEKTNIEVVETICALLDEFLPDSPHRPHRQLIRFVQDRPGHDLRYAIDAG 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P+E E+GL KTV WYL N W Sbjct: 304 KIGRELGWQPEETFETGLRKTVRWYLANRDW 334 >gi|109898449|ref|YP_661704.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas atlantica T6c] gi|109700730|gb|ABG40650.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas atlantica T6c] Length = 363 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 180/347 (51%), Positives = 243/347 (70%), Gaps = 15/347 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+L+ + + V+ +D LTYAGN S+ + S+ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHLLANTQDSVINVDVLTYAGNTESIPQELHSDRYRFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I+ QPDA+++ AAESHVDRSI G FI TN++GT+ LL+ R +W L + Sbjct: 61 DAAEIKRVFNAHQPDAVMHLAAESHVDRSIDGPGAFIQTNVVGTYTLLDAARAYWQDLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 ++K QF F ISTDEVYG L + LF+E+ PY PSSPYSA+KASSD+LV + Sbjct: 121 ERKGQFIFHHISTDEVYGDLPHPDEVSGGGELPLFTENTPYAPSSPYSASKASSDHLVRS 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKL+P I + G + +YGDG +RDWL+VEDH Sbjct: 181 WQRTYGLPTVITNCSNNYGPYHFPEKLVPHVILNALAGKPLPVYGDGSQIRDWLFVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-----SHTELIRFIE 285 RAL LV+K G +GE +NIGG+NE++N+D+V I LLD L P+ ++ +LI F++ Sbjct: 241 RALCLVVKSGSVGETFNIGGHNEKRNLDVVRTICALLDELAPQQRAADISAYADLITFVK 300 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID+S I+ +GW P+E+ SG+ KTV WYL N WW+ Sbjct: 301 DRPGHDARYAIDASHIQKALGWKPEEDFVSGMRKTVQWYLSNESWWQ 347 >gi|190150740|ref|YP_001969265.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264142|ref|ZP_07545736.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915871|gb|ACE62123.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870516|gb|EFN02266.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 354 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/336 (57%), Positives = 249/336 (74%), Gaps = 6/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL + S+ +SF QVDIC+ Sbjct: 3 KILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLLMVENSSRYSFEQVDICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L D Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWNSLDTD 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKAAFRFHHISTDEVYGDLEGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKLIPL I +EG + +YG+GQ +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPFHFPEKLIPLMILNALEGKKLPVYGNGQQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI ++ DRPGHD RYA Sbjct: 243 GEIGETYNIGGHNEKANIDVVRTICSLLEELVPNKPTGVKKYEDLITYVTDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID+SKI E+GW PQE E+G+ KTV WYL+N WW Sbjct: 303 IDASKIGRELGWKPQETFETGIRKTVEWYLNNTEWW 338 >gi|288942435|ref|YP_003444675.1| dTDP-glucose 4,6-dehydratase [Allochromatium vinosum DSM 180] gi|288897807|gb|ADC63643.1| dTDP-glucose 4,6-dehydratase [Allochromatium vinosum DSM 180] Length = 355 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 185/333 (55%), Positives = 237/333 (71%), Gaps = 3/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIG +++ ++V+ +D+LTYAGNL++L ++ F+Q DI D Sbjct: 4 LLVTGGAGFIGGNFVHHILEQADVRVVNLDRLTYAGNLDTLAGLAGDPRHVFVQGDIADA 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L+E++ DA+VNFAAESHVDRSI G EFI TN++GTF LL+ R +W+ L Sbjct: 64 ELVGRLLREYEVDAVVNFAAESHVDRSIDGPAEFIQTNVVGTFNLLDRARDYWTGLGPAA 123 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRFL +STDEVYGSL GLF+E PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 124 RATFRFLHVSTDEVYGSLGPTGLFTETTPYAPNSPYSASKAASDHLVRAWFHTYGLPVLT 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPY FPEKLIPL I + G + +YGDG NVRDWL+V DH RA+ VL+ G Sbjct: 184 TNCSNNYGPYQFPEKLIPLMILKAQAGEPLPIYGDGGNVRDWLFVLDHCRAIARVLEAGT 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GGN+ER N+ +V + LLD +P S H+ L F+ DRPGHDRRYAID+S Sbjct: 244 PGEVYNVGGNSERTNLQVVDTLCALLDERLPDSPHRPHSRLKTFVADRPGHDRRYAIDAS 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K+K E+GW P E ESG+ +TV WYLDN W R Sbjct: 304 KLKRELGWEPTETFESGMRRTVDWYLDNPEWCR 336 >gi|330815725|ref|YP_004359430.1| DTDP-glucose 4,6-dehydratase [Burkholderia gladioli BSR3] gi|327368118|gb|AEA59474.1| DTDP-glucose 4,6-dehydratase [Burkholderia gladioli BSR3] Length = 353 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/352 (54%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEPVLNVDKLTYAGNLGTLKSLQDNPNHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L E +P AI++FAAESHVDRSI G +F+ TN++GTF +LE TR +W+ L D Sbjct: 62 AAIDALLVEHRPRAILHFAAESHVDRSIHGPADFVQTNVVGTFTMLEATRQYWNTLDADA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KTSFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYFHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD L PK+ S+ E I F+ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHVLCDLLDELKPKAGASYREQIAFVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+G+ KTV WYLDN W E +Y W +N Sbjct: 302 KLERELGWKPAETFETGMAKTVRWYLDNQVW-----AEEVASGEYRNWVEMN 348 >gi|83944594|ref|ZP_00957044.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. EE-36] gi|83844571|gb|EAP82458.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. EE-36] Length = 345 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/335 (54%), Positives = 236/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R + VL +D LTYA L+++ ++ S L++F Q +IC Sbjct: 1 MKLLVTGGAGFIGSAVVRLAIAR-GYSVLNLDALTYAACLDNVASVADSPLYAFEQANIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + +PDA+++ AAESHVDRSI G FI TN+ GT+ LLE R +W Sbjct: 60 DREALDRIFEAHKPDAVMHLAAESHVDRSIDGPGAFIQTNVTGTYTLLEAARAYWQ--DA 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYGSL G F+E+ PY+P SPYSA+KA+SD+LV AWG TYG+P+ Sbjct: 118 GKLGSFRFHHISTDEVYGSLGSTGQFTEETPYDPRSPYSASKAASDHLVRAWGETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGPYHFPEKL+P+ I + + G + +YGDG NVRDWL+VEDH AL VL K Sbjct: 178 VLTNCSNNYGPYHFPEKLVPVVILKALAGERIPVYGDGANVRDWLFVEDHADALLTVLTK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG NE N+++V I LLD P+ H +LI F+ DRPGHD+RYAID + Sbjct: 238 GELGRSYNIGGENEVSNLELVKMICALLDDRHPEGAPHADLITFVADRPGHDQRYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P +E GL +TV WYL+N WWR L Sbjct: 298 RIRTELGWRPSVTVEEGLARTVDWYLENEDWWRAL 332 >gi|320540290|ref|ZP_08039942.1| dTDP-glucose 4,6-dehydratase [Serratia symbiotica str. Tucson] gi|320029610|gb|EFW11637.1| dTDP-glucose 4,6-dehydratase [Serratia symbiotica str. Tucson] Length = 355 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/337 (56%), Positives = 244/337 (72%), Gaps = 6/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGSA+ R+++N V+V+DKLTYAGNL SL ++ + ++F QVDICD Sbjct: 3 RILITGGAGFIGSAVVRHIINATTDSVVVVDKLTYAGNLESLALVADNARYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E+QPD +++ AAESHVDRSI G FI TN++GT+ LLE R +W LS Sbjct: 63 RMALDRVFAEYQPDKVMHLAAESHVDRSIDGPAAFIETNVLGTYTLLEAARHYWQPLSAK 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L GLF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKPGFRFHHISTDEVYGDLLGTDGLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLVILNAVAGKSLPVYGDGAQVRDWLYVEDHARALYQVVTS 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+N+RKN ++V+ I LL+ L P ++ +LI +++DRPGHD YA Sbjct: 243 GVVGETYNIGGHNQRKNSEVVYSICDLLEELAPNKPQGVANYRDLITYVKDRPGHDMHYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID+ KI+ E+GW PQE ESG+ KTV WYL + WWR Sbjct: 303 IDAGKIERELGWRPQETFESGIRKTVSWYLHHESWWR 339 >gi|240129192|ref|ZP_04741853.1| RfbB [Neisseria gonorrhoeae SK-93-1035] gi|268687575|ref|ZP_06154437.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae SK-93-1035] gi|268627859|gb|EEZ60259.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae SK-93-1035] Length = 346 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 178/331 (53%), Positives = 241/331 (72%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDR+I A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PS+PYSA+KA++D+LV AW TY +P + Sbjct: 129 HEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSNPYSASKAAADHLVRAWQRTYRLPSI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ N++++ I LL+ L P+ + + +LI F++DRPGHD RYAI Sbjct: 249 VVGETYNIGGHNEKTNLEVIKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAI 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339 >gi|119898168|ref|YP_933381.1| dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72] gi|119670581|emb|CAL94494.1| dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72] Length = 358 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/331 (55%), Positives = 237/331 (71%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG + + VL +D LTYAGNL +L ++ F + DICDR Sbjct: 2 ILVTGGAGFIGGNFVLDWIAETGEPVLNLDALTYAGNLETLASLADDERHVFKRGDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L+ ++P AIV+FAAESHVDRSI G EFI TN+ GTF LLE R +W+ L D Sbjct: 62 ELVDGLLQTYRPRAIVHFAAESHVDRSIHGPGEFIRTNVQGTFTLLEAARAYWNGLPPDA 121 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL+ F+E P+ P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RAGFRFLHVSTDEVYGSLEPQAPAFTERHPFEPNSPYSASKAASDHLVRAWYHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDG NVRDWLYV+DH A+ VL +G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGRPLPVYGDGLNVRDWLYVKDHCSAIRRVLAQG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSS 299 R+GE YN+GG NE++NIDIV + LLD + P + S+ LI F++DRPGHDRRYAID+S Sbjct: 242 RLGETYNVGGWNEKRNIDIVHTVCALLDEMRPDPAGSYARLITFVQDRPGHDRRYAIDAS 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI++E+GW P E E+G+ KT+ WYL+N W Sbjct: 302 KIENELGWRPAETFETGIRKTIAWYLENPGW 332 >gi|307250736|ref|ZP_07532670.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857240|gb|EFM89362.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 354 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/336 (57%), Positives = 249/336 (74%), Gaps = 6/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL + S+ +SF QVDIC+ Sbjct: 3 KILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLLMVENSSRYSFEQVDICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L D Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHYWNSLDTD 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKAAFRFHHISTDEVYGDLEGTNDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKLIPL I +EG + +YG+GQ +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPFHFPEKLIPLMILNALEGKKLPVYGNGQQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI ++ DRPGHD RYA Sbjct: 243 GEIGETYNIGGHNEKANIDVVRTICSLLEELVPNKPTGVKKYEDLITYVTDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID+SKI ++GW PQE E+G+ KTV WYL+N WW Sbjct: 303 IDASKIGRKLGWKPQETFETGIRKTVEWYLNNTEWW 338 >gi|119512441|ref|ZP_01631523.1| dTDP-glucose 4,6-dehydratase [Nodularia spumigena CCY9414] gi|119462907|gb|EAW43862.1| dTDP-glucose 4,6-dehydratase [Nodularia spumigena CCY9414] Length = 359 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/333 (55%), Positives = 241/333 (72%), Gaps = 3/333 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++VTGGAGFIG+ V+ +DKLTYA NL +L E+ + F+Q DI Sbjct: 2 LTILVTGGAGFIGANFVLLARQLGWANVINLDKLTYASNLGTLAELQGDKNYHFVQGDIG 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + L+++QPDAI+NFAAESHVDRSIL ++FI TN++GTF LLE +R +W LS Sbjct: 62 NLELVGYLLEKYQPDAIINFAAESHVDRSILSPEDFIQTNVVGTFKLLEASRFYWQKLSA 121 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ +FRFL +STDEVYGSL+ F ED PY P+SPY+A+KA+SD+ V A+ HTYG P Sbjct: 122 SKQSEFRFLHVSTDEVYGSLNPKDPAFCEDTPYAPNSPYAASKAASDHFVRAYYHTYGFP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L +NCSNNYGP FPEKLIPL I +EG + +YGDGQN+RDWLYV DH A+ LVL+ Sbjct: 182 TLTTNCSNNYGPRQFPEKLIPLTILNAMEGKSLPIYGDGQNIRDWLYVIDHCEAINLVLQ 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAID 297 +G++GE YNIGG NE+ N+ +V +I ++D L PK +SH+ LI F++DRPGHDRRYAID Sbjct: 242 QGKVGETYNIGGINEKTNLIVVEKICAIIDELAPKPDFSHSSLITFVKDRPGHDRRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI E+GW P EN +SGL KTV WYL+N+ W Sbjct: 302 CSKISDELGWQPHENFDSGLFKTVQWYLNNSDW 334 >gi|163748304|ref|ZP_02155586.1| dTDP-glucose 4,6-dehydratase [Oceanibulbus indolifex HEL-45] gi|161378423|gb|EDQ02910.1| dTDP-glucose 4,6-dehydratase [Oceanibulbus indolifex HEL-45] Length = 345 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/335 (54%), Positives = 236/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R + V+ +D LTYA L++L +S ++F DI Sbjct: 1 MKLLVTGGAGFIGSAVVRLALAQGH-AVVNLDALTYAACLDNLAGVSDRPGYAFEHADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + PDA+++ AAESHVDRSI G FI TN+ GT+ LL+ R +W + Sbjct: 60 DAQALVRIFTDHTPDAVLHLAAESHVDRSIDGPGAFIDTNVTGTYTLLQAARAYWE--GR 117 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D FRF +STDEVYGSL +G F+E+ PY P+SPYSA+KA+SD+LV AWG TYG+PV Sbjct: 118 GRPDGFRFHHVSTDEVYGSLGAEGYFTEETPYAPNSPYSASKAASDHLVRAWGETYGMPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 LLSNCSNNYGPYHFPEKLIP+ I + G + +YG G+N+RDWLYVEDH AL VL K Sbjct: 178 LLSNCSNNYGPYHFPEKLIPVVILNALSGKPIPIYGTGENIRDWLYVEDHAEALLTVLTK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGGN E +NID+V +I LLD L P +++ +LI F+EDRPGHD RYAID+S Sbjct: 238 GAVGRSYNIGGNAEARNIDLVRQICALLDELRPARHAYADLITFVEDRPGHDARYAIDAS 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P +E GL TV WYLDN WW+ L Sbjct: 298 RIRTELGWQPSVTLEEGLRHTVAWYLDNPAWWQAL 332 >gi|312100474|gb|ADQ27860.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei] Length = 400 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 49 ILVTGGAGFIGANFVLDWLTQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 108 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 109 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGTDA 168 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 169 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 228 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 229 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 288 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 289 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 348 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 349 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 395 >gi|240116755|ref|ZP_04730817.1| RfbB [Neisseria gonorrhoeae PID18] gi|268602426|ref|ZP_06136593.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID18] gi|268586557|gb|EEZ51233.1| dTDP-glucose 4,6-dehydratase [Neisseria gonorrhoeae PID18] Length = 346 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/331 (53%), Positives = 241/331 (72%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++PDA+++ AAESHVDR+I A EFI TNI+GTF LLE R +W + +K Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PS+PYSA+KA++D+LV AW TY +P + Sbjct: 129 HEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSNPYSASKAAADHLVRAWQRTYRLPSI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +GE YNIGG+NE+ N++++ I LL+ L P+ + + +LI F++DRPGHD RYA+ Sbjct: 249 VVGETYNIGGHNEKTNLEVIKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAV 308 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++KI+ ++GW P E ESGL KTV WYLDN Sbjct: 309 DAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339 >gi|293611245|ref|ZP_06693543.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826496|gb|EFF84863.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 355 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/355 (54%), Positives = 255/355 (71%), Gaps = 11/355 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + K +VL +DKLTYAGNL SL ++ + + F Q DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIQNTKNEVLNVDKLTYAGNLESLISVADNPRYQFSQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + FQPDA+++ AAESHVDRSI G FI TN+IGT+ +LE +R +W LS Sbjct: 61 DRAALDKLFETFQPDAVMHLAAESHVDRSITGPYAFIETNVIGTYQMLEASRAYWLGLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L+ LF+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EKKAAFRFHHISTDEVYGDLEGTTDLFTETTSYSPSSPYSASKASSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGP+HFPEKLIPL I ++ + +YG+GQ +RDWL+VEDH RALY V+ Sbjct: 181 VLVTNCSNNYGPFHFPEKLIPLMILNALQAKPLPVYGNGQQIRDWLFVEDHARALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ N+D+V+ I LL+ L PK + +LI +++DRPGHD RY Sbjct: 241 QGVIGETYNIGGHNEKANLDVVYAICDLLEELAPKKPEGVAQYKDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKN 349 AID++KIK E+ W P+E+ E+GL KTV WYL+N W E +Y W N Sbjct: 301 AIDATKIKDELNWVPEESFETGLRKTVEWYLNNKEW-----VEHVQSGEYQSWLN 350 >gi|76808899|ref|YP_334535.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1710b] gi|254195972|ref|ZP_04902397.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei S13] gi|76578352|gb|ABA47827.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1710b] gi|169652716|gb|EDS85409.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei S13] Length = 400 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 49 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 108 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 109 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGTDA 168 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 169 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 228 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 229 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 288 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 289 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 348 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 349 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 395 >gi|84684394|ref|ZP_01012295.1| dTDP-glucose 4,6-dehydratase [Maritimibacter alkaliphilus HTCC2654] gi|84667373|gb|EAQ13842.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2654] Length = 346 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/335 (54%), Positives = 242/335 (72%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R ++ + +V+ +D LTYA L+++ ++ + ++F QVDI Sbjct: 1 MKILVTGGAGFIGSAVVRLAISRGQ-EVVNLDALTYAACLDNVASVADAPGYAFEQVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L + +PDAI++ AAESHVDRSI G FI TN++GTF LLE R +W Q Sbjct: 60 DRPALDRVLSDHRPDAIMHLAAESHVDRSIDGPATFIETNVMGTFNLLEAARSYWD--GQ 117 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF ISTDEV+GSL +G F+E+ PY+P SPYSA+KASSD+LV AW TYG+PV Sbjct: 118 GRDPAFRFHHISTDEVFGSLGPEGQFTEESPYDPRSPYSASKASSDHLVRAWHETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGPYHFPEKLIP+ I + + G + +YGDG NVRDWLYVEDH AL LVL++ Sbjct: 178 VLTNCSNNYGPYHFPEKLIPIVILKALAGEPIPIYGDGSNVRDWLYVEDHADALLLVLEE 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G IG YNIGG NER N+D+V + +LD + PK S+ + I F+ DRPGHD RYAID + Sbjct: 238 GAIGRSYNIGGENERSNLDLVRTLCTILDRMAPKEGSYGDQITFVADRPGHDARYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+GW P +E GL KTV WYLDN WW+ L Sbjct: 298 RIRDELGWRPSVTVEEGLEKTVRWYLDNRDWWQAL 332 >gi|121598415|ref|YP_992263.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei SAVP1] gi|124385907|ref|YP_001028705.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei NCTC 10229] gi|238560981|ref|ZP_00442594.2| dTDP-glucose 4,6-dehydratase [Burkholderia mallei GB8 horse 4] gi|251767280|ref|ZP_02266641.2| dTDP-glucose 4,6-dehydratase [Burkholderia mallei PRL-20] gi|254207600|ref|ZP_04913950.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei JHU] gi|254356498|ref|ZP_04972774.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei 2002721280] gi|121227225|gb|ABM49743.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei SAVP1] gi|124293927|gb|ABN03196.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei NCTC 10229] gi|147751494|gb|EDK58561.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei JHU] gi|148025495|gb|EDK83649.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei 2002721280] gi|238525298|gb|EEP88726.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei GB8 horse 4] gi|243063266|gb|EES45452.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei PRL-20] Length = 400 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 49 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 108 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 109 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGTDA 168 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 169 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 228 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 229 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 288 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 289 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 348 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 349 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 395 >gi|187922880|ref|YP_001894522.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] gi|187714074|gb|ACD15298.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] Length = 353 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/352 (53%), Positives = 239/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNASDEAVLNVDKLTYAGNLGTLKSQQNNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L + Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWTALGEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKALPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG NE+KN+D+V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNIGGWNEKKNLDVVHTLCDLLDQLRPKTGASYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQAW-----SDEVASGDYRKWVETN 348 >gi|110635096|ref|YP_675304.1| dTDP-glucose 4,6-dehydratase [Mesorhizobium sp. BNC1] gi|110286080|gb|ABG64139.1| dTDP-glucose 4,6-dehydratase [Chelativorans sp. BNC1] Length = 352 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/339 (54%), Positives = 233/339 (68%), Gaps = 5/339 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+CR L + V+ +DKLTYAGN SL EI + + F++ DIC Sbjct: 1 MRILVTGGAGFIGSAVCRRLAANRGNVVINVDKLTYAGNRTSLSEIETQSNYHFVRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R F D I++ AAESHVDRSI G FI NI+GTF LLE +W L Sbjct: 61 DMRKMRETFDRFAIDGIMHLAAESHVDRSIDGPAAFIEANIVGTFRLLEAALDYWRSLDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ +FRF +STDEV+G L F E PY PSSPYSA+KA++D+LV AW TYG+ Sbjct: 121 ERRARFRFHHVSTDEVFGDLPFDPSKKFDETTPYAPSSPYSASKAAADHLVRAWHATYGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+LSNCSNNYGP+HFPEKLIPL I +E + +YG G+NVRDWL+VEDH RAL V Sbjct: 181 PVVLSNCSNNYGPFHFPEKLIPLTILNALEEKPLPVYGSGENVRDWLFVEDHARALEQVF 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 + GR+GE Y IGGN+ER N+ +V I LLD P+ +LI F+ DRPGHDRRYA Sbjct: 241 RHGRVGESYAIGGNSERTNLAVVETICDLLDTRRPRPGGKPRRDLIVFVHDRPGHDRRYA 300 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW P + E+GL +T+ WYL N WWW+P+ Sbjct: 301 IDASKIDRELGWKPSVSFETGLARTIDWYLANAWWWKPI 339 >gi|145629948|ref|ZP_01785730.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae R3021] gi|145632245|ref|ZP_01787980.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 3655] gi|145634035|ref|ZP_01789746.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittAA] gi|145636997|ref|ZP_01792661.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittHH] gi|145638308|ref|ZP_01793918.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittII] gi|148826482|ref|YP_001291235.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittEE] gi|229844752|ref|ZP_04464891.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 6P18H1] gi|319775194|ref|YP_004137682.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae F3047] gi|329122884|ref|ZP_08251455.1| dTDP-glucose 4,6-dehydratase [Haemophilus aegyptius ATCC 11116] gi|144984229|gb|EDJ91652.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae R3021] gi|144987152|gb|EDJ93682.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 3655] gi|145268479|gb|EDK08472.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittAA] gi|145269855|gb|EDK09794.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittHH] gi|145272637|gb|EDK12544.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittII] gi|148716642|gb|ABQ98852.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittEE] gi|229812466|gb|EEP48156.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 6P18H1] gi|309751459|gb|ADO81443.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R2866] gi|317449785|emb|CBY85992.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae F3047] gi|327471815|gb|EGF17255.1| dTDP-glucose 4,6-dehydratase [Haemophilus aegyptius ATCC 11116] Length = 334 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/334 (54%), Positives = 247/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWHTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV+ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLVISNALMGKPLPIYGDGQQIRDWLFVEEHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW P+ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPKITFERGLSQTVQWYLFNS 334 >gi|145628207|ref|ZP_01784008.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 22.1-21] gi|148828056|ref|YP_001292809.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittGG] gi|144979982|gb|EDJ89641.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 22.1-21] gi|148719298|gb|ABR00426.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittGG] Length = 334 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/334 (54%), Positives = 247/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWHTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV+ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLMISNALMGKPLPIYGDGQQIRDWLFVEEHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW P+ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPKITFERGLSQTVQWYLFNS 334 >gi|312100404|gb|ADQ27800.1| dTDP-4-glucose 4,6-dehydratase [Burkholderia pseudomallei] gi|312100444|gb|ADQ27838.1| dTDP-4-glucose 4,6-dehydratase [Burkholderia pseudomallei] Length = 400 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 49 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 108 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 109 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGPDA 168 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 169 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 228 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 229 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 288 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 289 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 348 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 349 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 395 >gi|238759808|ref|ZP_04620965.1| dTDP-glucose 4,6-dehydratase [Yersinia aldovae ATCC 35236] gi|238701951|gb|EEP94511.1| dTDP-glucose 4,6-dehydratase [Yersinia aldovae ATCC 35236] Length = 339 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/323 (55%), Positives = 231/323 (71%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R++++ VLV+DKLTYAGNL SL ++ S ++F VDICDR + ++QPD Sbjct: 1 MVRHIIDGTSDSVLVVDKLTYAGNLESLAVVAHSERYAFELVDICDRAELDRVFAQYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI G FI TN++GT+ +LE R +W L + K FRF ISTDE Sbjct: 61 VVMHLAAESHVDRSIDGPAAFIETNVVGTYTMLEAARHYWQQLRAEAKLAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHF Sbjct: 121 VYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPTLVTNCSNNYGPYHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I + G + +YG+G VRDWL+VEDH RALY V+ +G +GE YNIGG+NE Sbjct: 181 PEKLIPLVILNALAGKPLPVYGNGAQVRDWLFVEDHARALYQVVTEGVVGETYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 RKNI++V I LLD LIP + + +LI +++DRPGHD RYAID+SKI+ E+GW P Sbjct: 241 RKNIEVVETICTLLDELIPAKPAGIVHYRDLITYVKDRPGHDMRYAIDASKIERELGWRP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE ESG+ KTV WYL+N WW+ Sbjct: 301 QETFESGIRKTVLWYLNNKSWWQ 323 >gi|307246376|ref|ZP_07528452.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255362|ref|ZP_07537172.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259812|ref|ZP_07541530.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852709|gb|EFM84938.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861671|gb|EFM93655.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866110|gb|EFM97980.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 353 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 250/337 (74%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL+ + + + F VDIC Sbjct: 1 MKILVTGGAGFIGSAIVRHIINNTQDSVINVDKLTYAGNLESLQMVENHSRYIFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + ++QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Sbjct: 61 NRAELERVFAQYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNSLDT 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DKK FRF ISTDEVYG L+ LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DKKSLFRFHHISTDEVYGDLEGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP+HFPEKLIPL I +EG + +YG+GQ +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGQQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NID+V I LL+ L+P + + +LI ++ DRPGHD RY Sbjct: 241 EGKVGETYNIGGHNEKANIDVVRTICSLLEELVPNKPAGVKKYEDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID++KI E+GW PQE E+G+ KTV WYL+N WW Sbjct: 301 AIDATKIGRELGWQPQETFETGIRKTVEWYLNNTEWW 337 >gi|167580853|ref|ZP_02373727.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis TXDOH] Length = 353 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/352 (53%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L +++P AI++FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQYKPRAILHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALDADA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDNQEWVDEV-----ASGDYRKWVETN 348 >gi|83719152|ref|YP_442015.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis E264] gi|83652977|gb|ABC37040.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis E264] Length = 397 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/352 (53%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 46 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 105 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L +++P AI++FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 106 AAIDALLAQYKPRAILHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALDADA 165 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 166 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 225 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 226 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 285 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 286 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 345 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 346 KLERELGWKPAETFETGLAKTVRWYLDSQEWVDEVAS-----GDYRKWVETN 392 >gi|303252477|ref|ZP_07338641.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248512|ref|ZP_07530530.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648678|gb|EFL78870.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854988|gb|EFM87173.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 354 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/336 (56%), Positives = 249/336 (74%), Gaps = 6/336 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL + S + F QVDIC+ Sbjct: 3 KILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLESLLMVENSPRYVFEQVDICN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L D Sbjct: 63 RAELDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARYYWNSLDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ + LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSLFRFHHISTDEVYGDLEGTEDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKLIPL I +EG + +YG+GQ +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGQQIRDWLFVEDHARALYKVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NE+ NID+V I LL+ L+P + + +LI ++ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNEKANIDVVRTICSLLEELVPNKPAGVHKYEDLITYVTDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID++KI E+GW PQE E+G+ KTV WYL+N WW Sbjct: 303 IDATKIGRELGWKPQETFETGIRKTVEWYLNNTEWW 338 >gi|260576535|ref|ZP_05844524.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] gi|259021258|gb|EEW24565.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] Length = 346 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 181/335 (54%), Positives = 238/335 (71%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V V+ +D LTYA L+++ ++ SNL+SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGH-AVINLDALTYAACLDNVASVAGSNLYSFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G +FI+TNI GT+ LLE R +W+ + Sbjct: 60 DRAALDAVFARHRPDAVMHLAAESHVDRSIDGPGDFISTNITGTYTLLEAARAFWT--AA 117 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF ISTDEV+G+L G F+ED PY P+SPY+A+KA+SD+LV AW TYG+PV Sbjct: 118 GRPAGFRFHHISTDEVFGTLGPTGQFTEDTPYAPNSPYAASKAASDHLVRAWSETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKLIP+ I + G + +YG G+NVRDWL+VEDH AL VL++ Sbjct: 178 VLTNCSNNYGPFHFPEKLIPVVILNALAGKPIPVYGRGENVRDWLFVEDHADALLCVLER 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG NE +NID+V I LLD + P H LIRF+ DRPGHD RYAID S Sbjct: 238 GALGRSYNIGGENEARNIDLVRMICSLLDEMHPAGAPHDRLIRFVTDRPGHDARYAIDPS 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P +E GL +TV WYLDN WW+ L Sbjct: 298 RIRNELGWRPSVTLEQGLRRTVRWYLDNPGWWQAL 332 >gi|229845924|ref|ZP_04466036.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 7P49H1] gi|229810928|gb|EEP46645.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 7P49H1] Length = 334 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/334 (54%), Positives = 247/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWHTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV+ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLVISNALMGKLLPIYGDGQQIRDWLFVEEHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW P+ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPKITFERGLSQTVQWYLFNS 334 >gi|118588017|ref|ZP_01545427.1| dTDP-glucose 4,6-dehydratase [Stappia aggregata IAM 12614] gi|118439639|gb|EAV46270.1| dTDP-glucose 4,6-dehydratase [Stappia aggregata IAM 12614] Length = 360 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/332 (55%), Positives = 234/332 (70%), Gaps = 1/332 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R LV+ V+ +D LTYAGN+ SL + + F++ DI Sbjct: 1 MKVLVTGGAGFIGSAVVRKLVSQQLAGVVTVDALTYAGNMASLAPVLDTRQHRFVKADIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + S L++ PDA+++ AAESHVDRSI G FI TNI+GT LLE R +WS L Sbjct: 61 DGAAMASLLEKEAPDAVMHLAAESHVDRSIDGPAAFIDTNIVGTCTLLEAVRGYWSGLPL 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+ FRF +STDEVYGSL G F E Y P+SPYSA+KA+SD+LV AW HTYG+PV Sbjct: 121 PRKEAFRFHHVSTDEVYGSLGPSGAFKETTAYAPNSPYSASKAASDHLVRAWHHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPY FPEKLIPL I +E + +YG G N+RDWL+VEDH AL+LVL + Sbjct: 181 VTTNCSNNYGPYQFPEKLIPLMILNGLEDKPLPVYGAGANIRDWLHVEDHADALWLVLTR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G+ YNIGG+ ER+NID+V+ I LLD L+P S ELI F+ DRPGHD RYA+D S Sbjct: 241 GVPGQVYNIGGDAERRNIDVVYLICDLLDELVPSGKSRHELITFVTDRPGHDARYAMDIS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +I +E+GW P + ESGL +TV WYL N WW Sbjct: 301 RITAELGWRPSHSFESGLRQTVDWYLANRSWW 332 >gi|309973630|gb|ADO96831.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R2846] Length = 334 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/334 (54%), Positives = 247/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWYTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV+ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLVISNALMGKPLPIYGDGQQIRDWLFVEEHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW P+ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPKITFERGLSQTVQWYLFNS 334 >gi|293407679|gb|ADE44333.1| putative dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei] Length = 353 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGPDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 348 >gi|261868370|ref|YP_003256292.1| hypothetical protein D11S_1710 [Aggregatibacter actinomycetemcomitans D11S-1] gi|3132254|dbj|BAA28131.1| dTDP-D-glucose-4,6-dehydratase [Actinobacillus actinomycetemcomitans] gi|261413702|gb|ACX83073.1| hypothetical protein D11S_1710 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 355 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/335 (56%), Positives = 250/335 (74%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ + + + F QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRYIIENTQDSVVNVDKLTYAGNLESLETVKNNPRYIFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ QPD +++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L+ +K Sbjct: 65 KALARIFEQHQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAARAYWSSLNDEK 124 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG LD K LF+E PY+PSSPYSA+KASSD+LV AW TY +P + Sbjct: 125 KAGFRFHHISTDEVYGDLDGTKNLFTETTPYSPSSPYSASKASSDHLVRAWLRTYSLPTI 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP+HFPEKLIPL I ++G + +YG+GQ +RDWL+VEDH RALY V+ +G Sbjct: 185 VTNCSNNYGPFHFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFVEDHARALYKVVTEG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI +++DRPGHD RYAI Sbjct: 245 KIGETYNIGGHNEKANIDVVRTICALLEELVPNKPAGVTKYEDLITYVKDRPGHDVRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 DATKISRELGWKPQETFESGIRKTVEWYLNNQKWW 339 >gi|320102993|ref|YP_004178584.1| dTDP-glucose 4,6-dehydratase [Isosphaera pallida ATCC 43644] gi|319750275|gb|ADV62035.1| dTDP-glucose 4,6-dehydratase [Isosphaera pallida ATCC 43644] Length = 381 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/342 (54%), Positives = 238/342 (69%), Gaps = 3/342 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSAL R L+ QV+ +D LTYAGNL SL+E F+QVD+ Sbjct: 1 MKLLVTGGAGFIGSALVRRLIRTTSHQVVNLDALTYAGNLESLEEAFDDPRHVFVQVDLN 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE +R+ ++ PD +++ AAESHVDRSI G FI TNI GTF LL W LS+ Sbjct: 61 DREAVRTVFRDHDPDGVLHLAAESHVDRSIDGPGAFIQTNIGGTFHLLTAALEHWQGLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ +FRFL +STDEVYGSL G F E PY P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 SRQHRFRFLHVSTDEVYGSLGPTGYFDETTPYAPNSPYSASKAASDFLVRAWHHTYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+++CSNNYGP +PEKLIPL I + G + +YG G NVRDWLYV+DHVRAL V ++ Sbjct: 181 LITHCSNNYGPRQYPEKLIPLMIRHALAGKPLPVYGQGANVRDWLYVDDHVRALIEVFER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 GR+G Y+IGG NE+ N+++V I LLD L P S H LI F+ DRPGHD RYAI+ Sbjct: 241 GRVGGVYDIGGKNEKTNLEVVRAICGLLDELRPDSPFRPHERLIEFVADRPGHDLRYAIN 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++I++E+GW P E E+GL KTV WYLD+ W + K L+ Sbjct: 301 PARIEAELGWTPLETFETGLRKTVQWYLDHTEWVERVAKGLE 342 >gi|251790439|ref|YP_003005160.1| dTDP-glucose 4,6-dehydratase [Dickeya zeae Ech1591] gi|247539060|gb|ACT07681.1| dTDP-glucose 4,6-dehydratase [Dickeya zeae Ech1591] Length = 354 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 242/338 (71%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSA+ R+++ + +V+V+D LTYAGNL SLKE++ F F +V+IC Sbjct: 1 MNILVTGGAGFIGSAVVRHIIQHTQDRVMVVDCLTYAGNLASLKEVAADPRFLFEKVNIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + FQPD +++ AAESHVDRSI G FI TNI GT+ LLE R +WS L Q Sbjct: 61 DRAGLDRVFTTFQPDVVMHLAAESHVDRSIDGPSAFIETNITGTYTLLEAARQYWSALPQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L LF+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 ARKTAFRFHHISTDEVYGDLHGTDDLFTETTPYSPSSPYSASKAASDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YG+G +RDWLYVEDH RALY V+ Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGEGNQIRDWLYVEDHARALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 G +GE YNIGG+NERKNI++V I LLD L P+ + + ELI + DRPGHD RY Sbjct: 241 SGEVGETYNIGGHNERKNIEVVQTICALLDELRPEKPAGIRHYAELITHVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID+SKI E+GW P E ESG+ KTV WYL N WWR Sbjct: 301 AIDASKIYRELGWKPLETFESGIRKTVEWYLANEIWWR 338 >gi|327250640|gb|EGE62346.1| dTDP-glucose 4,6-dehydratase [Escherichia coli STEC_7v] Length = 329 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/326 (58%), Positives = 241/326 (73%), Gaps = 6/326 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETNDAVVVVDKLTYAGNLMSLAPVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALAED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVVTT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+++V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 243 GKVGETYNIGGHNERKNLEVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTV 321 ID+SKI E+GW PQE ESG+ KTV Sbjct: 303 IDASKIARELGWLPQETFESGMRKTV 328 >gi|53725974|ref|YP_103577.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei ATCC 23344] gi|126447987|ref|YP_001081389.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei NCTC 10247] gi|126454814|ref|YP_001067379.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1106a] gi|167846976|ref|ZP_02472484.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei B7210] gi|167895558|ref|ZP_02482960.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 7894] gi|167912207|ref|ZP_02499298.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 112] gi|167920168|ref|ZP_02507259.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei BCC215] gi|217420997|ref|ZP_03452502.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 576] gi|237813508|ref|YP_002897959.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei MSHR346] gi|242314974|ref|ZP_04813990.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1106b] gi|254175699|ref|ZP_04882359.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei ATCC 10399] gi|254191759|ref|ZP_04898262.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei Pasteur 52237] gi|254202267|ref|ZP_04908630.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei FMH] gi|254259455|ref|ZP_04950509.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1710a] gi|254298973|ref|ZP_04966423.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 406e] gi|13518093|gb|AAK27391.1| putative dTDP-D-glucose 4, 6-dehydratase [Burkholderia mallei] gi|52429397|gb|AAU49990.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei ATCC 23344] gi|126228456|gb|ABN91996.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1106a] gi|126240857|gb|ABO03950.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei NCTC 10247] gi|147746514|gb|EDK53591.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei FMH] gi|157809037|gb|EDO86207.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 406e] gi|157939430|gb|EDO95100.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei Pasteur 52237] gi|160696743|gb|EDP86713.1| dTDP-glucose 4,6-dehydratase [Burkholderia mallei ATCC 10399] gi|217396409|gb|EEC36426.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 576] gi|237505538|gb|ACQ97856.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei MSHR346] gi|242138213|gb|EES24615.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1106b] gi|254218144|gb|EET07528.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1710a] Length = 353 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGTDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 348 >gi|225873480|ref|YP_002754939.1| dTDP-glucose 4,6-dehydratase [Acidobacterium capsulatum ATCC 51196] gi|225793663|gb|ACO33753.1| dTDP-glucose 4,6-dehydratase [Acidobacterium capsulatum ATCC 51196] Length = 357 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/330 (55%), Positives = 238/330 (72%), Gaps = 2/330 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGS ++ +VL D LTYAGN +L + + ++ ++ D+CD Sbjct: 5 IFVTGGAGFIGSNFILNWLSTSSEKVLNFDLLTYAGNAQNLVSLEGDDRYTLVRGDLCDG 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R L+ +P AI++FAAESHVDRSI G FI TNI GTF LLE+ R +W L+ + Sbjct: 65 DLLRELLQTHRPRAILHFAAESHVDRSITGPSAFIRTNIEGTFQLLEQARAYWDGLNAED 124 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K QFRFL +STDEVYGSL D FSE+ PY P+SPY+A+KA SD+L AW HTYG+PVL Sbjct: 125 KQQFRFLHVSTDEVYGSLGPDDPAFSEETPYAPNSPYAASKAGSDHLARAWFHTYGMPVL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I +EG + +YGDGQNVRDWLYV DH A+ +VL++G Sbjct: 185 TTNCSNNYGPYQFPEKLIPLMILNALEGKPLPVYGDGQNVRDWLYVTDHCDAIRVVLERG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 ++GE YN+GGN+ERKN+DIV +I LLD L P + S ELIR++ DRPGHDRRYAI++SK Sbjct: 245 KLGETYNVGGNSERKNLDIVHQICDLLDELRPAATSRRELIRYVTDRPGHDRRYAINASK 304 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ E+GW P +E GL +TV WYL + W Sbjct: 305 LRRELGWSPTIQVEQGLRRTVEWYLAHMDW 334 >gi|301169592|emb|CBW29193.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 10810] Length = 334 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/334 (54%), Positives = 246/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWYTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLVISNALMGKPLPIYGDGQQIRDWLFVEEHVEALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW P+ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPKITFERGLSQTVQWYLFNS 334 >gi|53720296|ref|YP_109282.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei K96243] gi|126441508|ref|YP_001060117.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 668] gi|167720872|ref|ZP_02404108.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei DM98] gi|167739854|ref|ZP_02412628.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 14] gi|167817076|ref|ZP_02448756.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 91] gi|167825486|ref|ZP_02456957.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 9] gi|167903955|ref|ZP_02491160.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei NCTC 13177] gi|226193906|ref|ZP_03789508.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei Pakistan 9] gi|254180914|ref|ZP_04887512.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1655] gi|3135674|gb|AAD05454.1| putative dTDP-D-glucose 4,6-dehydratase [Burkholderia pseudomallei 1026b] gi|52210710|emb|CAH36694.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei K96243] gi|126221001|gb|ABN84507.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 668] gi|184211453|gb|EDU08496.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 1655] gi|225934211|gb|EEH30196.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei Pakistan 9] Length = 353 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGPDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 348 >gi|12232608|gb|AAG49403.1| dTDP-D-glucose-4,6-dehydratase [Aggregatibacter actinomycetemcomitans] Length = 355 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/335 (56%), Positives = 250/335 (74%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ + + + F QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRYIIENTQDSVVNVDKLTYAGNLESLEAVKNNPRYIFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ QPDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L+ +K Sbjct: 65 KALARIFEQHQPDAVMHLAAESHVDRSIDGPATFIETNIVGTYILLEAARAYWSSLNDEK 124 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG LD LF+E PY+PSSPYSA+KASSD+LV AW TY +P + Sbjct: 125 KAGFRFHHISTDEVYGDLDGTNNLFTETTPYSPSSPYSASKASSDHLVRAWLRTYSLPTI 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP+HFPEKLIPL I ++G + +YG+GQ +RDWL+VEDH RALY V+ +G Sbjct: 185 VTNCSNNYGPFHFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFVEDHARALYKVVTEG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI +++DRPGHD RYAI Sbjct: 245 KIGETYNIGGHNEKANIDVVRTICALLEELVPDKPAGVTKYEDLITYVKDRPGHDVRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 DATKISRELGWKPQETFESGIRKTVEWYLNNRKWW 339 >gi|134280477|ref|ZP_01767188.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 305] gi|134248484|gb|EBA48567.1| dTDP-glucose 4,6-dehydratase [Burkholderia pseudomallei 305] Length = 353 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AIV+FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARHYWSALGPDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVS-----GDYRKWVETN 348 >gi|170743902|ref|YP_001772557.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] gi|168198176|gb|ACA20123.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] Length = 350 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 233/335 (69%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL + +Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVRDLGHEVLTLDALTYAANPISLLPLRDEPRHRLVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + + EF+P+A+++ AAESHVDRSI G FI TN++GT ++LE R + L Sbjct: 61 EPERVAALFAEFRPEAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHHAGLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + +FRFL +STDEVYGSL G F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 DGQARFRFLHVSTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDGQN RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKALPVYGDGQNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG R N+ +V + + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRIGETYLLGGRAVRSNLSVVRTLCAIFDRLRPEAGPHERLISFVTDRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + + L +TV WYLD+ WW+P+ Sbjct: 301 KAEAELGWRPTRSFDQALEETVRWYLDHREWWQPI 335 >gi|317052618|ref|YP_004113734.1| dTDP-glucose 4,6-dehydratase [Desulfurispirillum indicum S5] gi|316947702|gb|ADU67178.1| dTDP-glucose 4,6-dehydratase [Desulfurispirillum indicum S5] Length = 391 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/364 (51%), Positives = 240/364 (65%), Gaps = 34/364 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGSA+ RYL+ +V+ +DKLTYAGNL+SL +S S+ +SF + DI D Sbjct: 15 FLVTGGAGFIGSAVIRYLIQHTAHRVVNVDKLTYAGNLDSLVSVSFSDRYSFEKADIADA 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I+ +QPD +++ AAESHVDRSI EF+ TNIIGT++LLE+ R +W + + Sbjct: 75 KAIKDIFSRYQPDIVLHLAAESHVDRSIDSPGEFMQTNIIGTYVLLEQARAYWQAMEPSR 134 Query: 123 KDQFRFLQISTDEVYGSL-----DKG------------------LFSEDMPYNPSSPYSA 159 FRF +STDEVYG L D G F+E PY PSSPYSA Sbjct: 135 SAGFRFHHVSTDEVYGDLPHPDDDAGNGETLPASPDSPSPTLQTRFTESTPYQPSSPYSA 194 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 +KA SD+LV AW T+G+PVL++NCSNNYGP FPEKLIPL I + G + +YG G Sbjct: 195 SKAGSDHLVRAWHRTFGLPVLVTNCSNNYGPCQFPEKLIPLMILNALAGRPLPVYGKGNQ 254 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----- 274 +RDWLYVEDH RAL LV G+IGE YNIGGN E++NID+V I +LD L P + Sbjct: 255 IRDWLYVEDHARALILVATTGKIGETYNIGGNEEKRNIDVVETICRVLDELCPINDGAQR 314 Query: 275 ------YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + +LIR + DRPGHD RYAID+ KI++E+GW+P+E ESG+ KTVCWYL+N Sbjct: 315 ESQCDIRRYADLIRHVPDRPGHDMRYAIDAGKIQNELGWWPEETFESGIRKTVCWYLENR 374 Query: 329 WWWR 332 WW+ Sbjct: 375 KWWQ 378 >gi|167570969|ref|ZP_02363843.1| dTDP-glucose 4,6-dehydratase [Burkholderia oklahomensis C6786] Length = 353 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/352 (53%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + +P AI++FAAESHVDRSI G +F+ TN++GTF LLE R +WS L + Sbjct: 62 AAVDALLAQHKPRAILHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALDAEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQIAYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDNQEWGDEVVS-----GDYRKWVETN 348 >gi|194290478|ref|YP_002006385.1| dtdp-glucose 4,6 dehydratase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] gi|193224313|emb|CAQ70324.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] Length = 354 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/333 (55%), Positives = 231/333 (69%), Gaps = 4/333 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ + D +V +DKLTYAGN +L + F Q DIC Sbjct: 3 HILVTGGAGFIGANFVLAWLGDKSADGVVNVDKLTYAGNRKTLASVEDDPRHVFSQTDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +P A+V+FAAESHVDRSI G +FI TNI+GTF LLE R +W+ L + Sbjct: 63 DRAALDKLFATHKPRAVVHFAAESHVDRSIHGPADFIQTNIVGTFTLLEAARAYWAGLEE 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FRFL +STDEV+GSL + FSE PY P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 123 PAKSAFRFLHVSTDEVFGSLSETDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 183 VLTTNCSNNYGPYHFPEKLIPLVIANALAGKPLPIYGDGQNVRDWLYVRDHCSAIREVLA 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 +G++GE YN+GG NE+ N+D+V + LLD L PK S+ + I F++DRPGHDRRYAID Sbjct: 243 RGKLGETYNVGGWNEKTNLDVVHTLCDLLDELQPKEVGSYRDQITFVKDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K++ E+GW P E ESGL KTV WYLDN W Sbjct: 303 ARKLERELGWKPAETFESGLRKTVQWYLDNQAW 335 >gi|167618954|ref|ZP_02387585.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis Bt4] gi|257138198|ref|ZP_05586460.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis E264] Length = 353 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/352 (53%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L +++P AI++FAAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AAIDALLAQYKPRAILHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALDADA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDSQEWVDEV-----ASGDYRKWVETN 348 >gi|37678484|ref|NP_933093.1| dTDP-D-glucose 4;6-dehydratase [Vibrio vulnificus YJ016] gi|37197224|dbj|BAC93064.1| dTDP-D-glucose 4;6-dehydratase [Vibrio vulnificus YJ016] Length = 353 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 249/337 (73%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL SL E+S S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINDTRDSVINLDKLTYAGNLESLHEVSSSERYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++PDA+++ AAESHVDRSI G FI TNI+GT+ LLE +R +WS L + Sbjct: 61 DRTELDRVFAVYKPDAVMHLAAESHVDRSIDGPATFIQTNIVGTYNLLEASRAYWSNLEE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K +FRF ISTDEVYG L+ + LF+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 NEKARFRFHHISTDEVYGDLEGTEDLFTESTSYSPSSPYSASKASSDHLVRAWQRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL I +EG + +YGDG +RDWL+VEDH RALY + Sbjct: 181 TLVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGDGMQIRDWLFVEDHARALYKAVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY----SHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V + LL+ P ++ LI +++DRPGHD RY Sbjct: 241 EGGVGETYNIGGHNEKANIEVVKTLCALLEEYRPNKPAGIDAYESLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID+SKI+ E+GW P+E ESG+ KTV WYL N WW Sbjct: 301 AIDASKIERELGWKPEETFESGIRKTVEWYLANQAWW 337 >gi|126657020|ref|ZP_01728191.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. CCY0110] gi|126621563|gb|EAZ92273.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. CCY0110] Length = 358 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/337 (56%), Positives = 236/337 (70%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + N+ V+V+D LTYAGN +L + F F+Q DICD Sbjct: 10 ILITGGAGFIGSNFVHHWCNNYPDDHVIVLDALTYAGNRQNLAGLEDRQNFKFIQGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I L E I +FAAESHVDRSILG D FI TN+IGTF LLE R +W+ Q Sbjct: 70 RLLIDKLLTEENITNIAHFAAESHVDRSILGPDAFIQTNVIGTFTLLESFRHYWN--EQG 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + +RFL +STDEVYGSL D FSE PY P+SPYSA+KA SD+L A+ HTY +P Sbjct: 128 KPENYRFLHVSTDEVYGSLEADDPAFSETTPYAPNSPYSASKAGSDHLARAYFHTYNVPT 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWLYV DH AL V+ K Sbjct: 188 IITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNIRDWLYVGDHCSALETVINK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE KNID+V + L+D L P ELI F++DRPGHDRRYAID Sbjct: 248 GKPGETYNIGGNNEVKNIDLVTLLCDLMDELAPDLPVKPAKELITFVKDRPGHDRRYAID 307 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++KIK+E+GW PQE +E+GL KT+ WYL+N WW+PL Sbjct: 308 ATKIKTELGWTPQETVENGLRKTIQWYLNNRDWWQPL 344 >gi|114321464|ref|YP_743147.1| dTDP-glucose 4,6-dehydratase [Alkalilimnicola ehrlichii MLHE-1] gi|114227858|gb|ABI57657.1| dTDP-glucose 4,6-dehydratase [Alkalilimnicola ehrlichii MLHE-1] Length = 367 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 228/332 (68%), Gaps = 3/332 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSAL R L+ + V+ +D LTYAGN SL E F Q DI + Sbjct: 12 RILVTGGAGFIGSALVRQLIAETDSTVINVDALTYAGNPESLAEARHHPRHVFEQEDIRN 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +E +PDA+++ AAESHVDRSI G FI TN+ GT LLE R +W L Sbjct: 72 RPALDRLFREHRPDAVMHLAAESHVDRSIEGPAAFIETNVTGTQNLLEAAREYWQALEPA 131 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++FRF ISTDEVYG L + F+E+ PY PSSPYSA+KA SD+LV AW HTYG+PV Sbjct: 132 ARERFRFHHISTDEVYGDLGPNDPAFTEETPYAPSSPYSASKAGSDHLVRAWHHTYGLPV 191 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 LL+NCSNNYGPY FPEKLIPL I +EG + +YG G NVRDWL+VEDH +AL VL+ Sbjct: 192 LLTNCSNNYGPYQFPEKLIPLMILNALEGKPLPVYGQGDNVRDWLHVEDHAQALRRVLEA 251 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDS 298 GR G YNIGG ER N+++V I LD L P+ S H LI+F+ DRPGHDRRYAID Sbjct: 252 GRPGRTYNIGGRAERTNLEVVHAICAHLDELRPRPSGRHEALIQFVTDRPGHDRRYAIDD 311 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+I E+ W PQE+ ESGL +TV WYL+N W Sbjct: 312 SRISQELDWQPQESFESGLRRTVEWYLENTEW 343 >gi|296159893|ref|ZP_06842714.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. Ch1-1] gi|295889876|gb|EFG69673.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. Ch1-1] Length = 353 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/352 (53%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNASDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + Sbjct: 62 SALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALGEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIASALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEKKNLEVVHTLCDLLDQLRPKAGASYHDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVRWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|150376942|ref|YP_001313538.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium medicae WSM419] gi|150031489|gb|ABR63605.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium medicae WSM419] Length = 355 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/338 (54%), Positives = 241/338 (71%), Gaps = 4/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSALCR+LV D +V+ +DKLTYAGNL SL++I + F++ DIC Sbjct: 1 MNILVTGGAGFIGSALCRHLVADPDNRVVSLDKLTYAGNLASLRQIENLRNYRFVRADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S L + D I++ AAE+HVDRSI G FI TNI+GTF LL+ +W L Sbjct: 61 DEGAIASILSAEKIDRIMHLAAETHVDRSIDGPGAFIETNILGTFRLLQAALHYWRGLCG 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF +STDEV+G SLD F+E PY PSSPYSA+KA+SD+LV AW HT+G+P Sbjct: 121 RAAEAFRFHHVSTDEVFGALSLDDESFNESTPYAPSSPYSASKAASDHLVRAWHHTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+L+NCSNNYGP+ FPEKLIPL I +E + +YG+G NVRDWLYV+DH RAL LV Sbjct: 181 VVLTNCSNNYGPFQFPEKLIPLTILNAMEERPLPVYGNGTNVRDWLYVDDHARALDLVAL 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 KG + E YNIGG ER N+ +V I +LD P+ SH +LI F++DRPGHD RYA+ Sbjct: 241 KGTVSESYNIGGGCERTNLHVVDTICDILDGKRPRRNGKSHRDLIAFVDDRPGHDWRYAM 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+G P+E+ E+G+ +T+ WYL+N WWW+P+ Sbjct: 301 DTSKIERELGLKPRESFETGIERTIDWYLENGWWWQPI 338 >gi|7592815|dbj|BAA94402.1| dTDP-D-glucose 4,6-dehydratase [Actinobacillus actinomycetemcomitans] Length = 355 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/335 (56%), Positives = 250/335 (74%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ + + + F QVDICD Sbjct: 5 ILITGGAGFIGSAVVRYIIENTQDSVVNVDKLTYAGNLESLEAVKNNPRYIFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ QPDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L+ +K Sbjct: 65 KALARIFEQHQPDAVMHLAAESHVDRSIDGPATFIETNIVGTYILLEAARAYWSSLNDEK 124 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG LD LF+E PY+PSSPYSA+KASSD+LV AW TY +P + Sbjct: 125 KAGFRFHHISTDEVYGDLDGTNNLFTETTPYSPSSPYSASKASSDHLVRAWLRTYSLPTI 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP+HFPEKLIPL I ++G + +YG+GQ +RDWL+VEDH RALY V+ +G Sbjct: 185 VTNCSNNYGPFHFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFVEDHARALYKVVTEG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI +++DRPGHD RYAI Sbjct: 245 KIGETYNIGGHNEKANIDVVRTICALLEELVPDKPAGVTKYEDLITYVKDRPGHDVRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 DATKISRELGWKPQETFESGIRKTVEWYLNNRKWW 339 >gi|295675696|ref|YP_003604220.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1002] gi|295435539|gb|ADG14709.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1002] Length = 353 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/352 (53%), Positives = 242/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + ++ F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNASDEAVLNVDKLTYAGNLGTLKSLQGNSKHIFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + + Sbjct: 62 AALDALLAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRSYWNTLGEAE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 RAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEKKNLEVVHTLCDLLDQQRPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQQWVDEV-----ASGEYRKWVETN 348 >gi|291615704|ref|YP_003518446.1| RffG [Pantoea ananatis LMG 20103] gi|291150734|gb|ADD75318.1| RffG [Pantoea ananatis LMG 20103] Length = 328 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 176/314 (56%), Positives = 232/314 (73%), Gaps = 7/314 (2%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++V+DKL+YAGNL+SL ++++ F F +VDICDR + S + QPD +++ AAE+HVD Sbjct: 1 MVVVDKLSYAGNLSSLACVTENPRFKFERVDICDRAALDSVFSQHQPDCVMHLAAETHVD 60 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD--KGLF 145 RSI G FI TNI+GT+ LLE R +W+ L+ D+K F F ISTDEV+G LD F Sbjct: 61 RSIDGPIAFIETNIVGTYQLLEAARHYWNALTGDRKKNFLFHHISTDEVFGDLDDTSAFF 120 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +ED PY PSSPYSATKASSD+LV AW TYG+PV+++NCSNNYGPYHFPEKLIPL I Sbjct: 121 TEDTPYAPSSPYSATKASSDHLVRAWLRTYGLPVIVTNCSNNYGPYHFPEKLIPLTIINA 180 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 + G + +YG+GQ VRDWLYVEDH RALY V+ +G+ GE YNIGG+NER+NI++V I Sbjct: 181 LAGKSLPVYGNGQQVRDWLYVEDHARALYTVVTRGKTGETYNIGGHNERQNIEVVETICC 240 Query: 266 LLDALIPKS-----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 LL+ L P+ +++ +LI ++ DRPGHD+RYAID+ KI+ E+GW P E ESG+ KT Sbjct: 241 LLEELAPERKLTGLHNYKDLISYVTDRPGHDQRYAIDARKIERELGWTPLETFESGMRKT 300 Query: 321 VCWYLDNNWWWRPL 334 V W+LDN WW+ + Sbjct: 301 VSWFLDNATWWQAI 314 >gi|77164291|ref|YP_342816.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|254434039|ref|ZP_05047547.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani AFC27] gi|76882605|gb|ABA57286.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|207090372|gb|EDZ67643.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani AFC27] Length = 358 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/333 (54%), Positives = 234/333 (70%), Gaps = 3/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAGFIGS + R+ + + V+ +DKLTYAGN SL++++ + F+ +IC R Sbjct: 6 LLITGGAGFIGSTVVRHFLAATERGVINVDKLTYAGNPESLEDLASHPRYEFVHANICQR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + +QP A+++ AAESHVDRSI FI TN+ GT+ILLE +W L + Sbjct: 66 EAMTQIFARYQPGAVLHLAAESHVDRSIDNPAAFIDTNVTGTYILLEAALDYWRKLDKSA 125 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +FRF ISTDEV+GSL GLF ED PY P+SPY+A+KA+SD+LV AW HTYG+PVL+ Sbjct: 126 QARFRFHHISTDEVFGSLGATGLFREDSPYQPNSPYAASKAASDHLVRAWYHTYGLPVLI 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP FPEKLIPL + +EG + +YG G NVRDWLYVEDHVRAL VL KG+ Sbjct: 186 TNCSNNYGPRQFPEKLIPLMVLNGMEGKSLPVYGAGDNVRDWLYVEDHVRALETVLNKGQ 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG NE+ N+++V I LD L+P+S H LI F+ DRPGHD+RYAID+ Sbjct: 246 PGETYNIGGYNEKTNVEVVELICQFLDELLPQSPHRPHRSLITFVADRPGHDQRYAIDAG 305 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI E+ W P+E E+GL KTV WYLDN W R Sbjct: 306 KIACELDWRPRETFETGLRKTVQWYLDNQNWCR 338 >gi|167563829|ref|ZP_02356745.1| dTDP-glucose 4,6-dehydratase [Burkholderia oklahomensis EO147] Length = 353 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/352 (53%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ ++ VL +DKLTYAGNL +LK + S F + DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLSSSDEAVLNVDKLTYAGNLRTLKSLEGSPRHVFARADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R++WS L + Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARVYWSNLDEAC 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL + F+E PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 RAAFRFLHVSTDEVFGSLSESDPQFTETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWLYV DH A+ VL G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKALPVYGDGRNVRDWLYVGDHCSAIREVLAHG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 + GE YNIGG NE+KN+D+V + LLDA PKS S+ + I ++ DRPGHDRRYAID+S Sbjct: 242 KPGETYNIGGWNEKKNLDVVHTLCDLLDAARPKSAGSYRDQIAYVTDRPGHDRRYAIDAS 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL +TV WYLDN W + DY KW N Sbjct: 302 KLERELGWKPAETFETGLKRTVQWYLDNQEWVDEVIS-----GDYRKWVETN 348 >gi|307320268|ref|ZP_07599687.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti AK83] gi|306894147|gb|EFN24914.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti AK83] Length = 355 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/338 (54%), Positives = 243/338 (71%), Gaps = 4/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGSALCRYLV D +V+ +DKLTYAGN SL++I + F++ DIC Sbjct: 1 MNILVTGGAGFIGSALCRYLVADPGNRVINLDKLTYAGNPASLRKIEALPNYRFVRGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D L + D I++ AAE+HVDRSI G FI TNI+GTF LL+ +W L Sbjct: 61 DEAAAADVLAAERIDRIMHLAAETHVDRSIDGPGTFIETNIVGTFRLLQAATKYWRNLPG 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++FRF +STDEV+G SLD F E+ PY PSSPYSA+KA+SD+LV AW HT+G+P Sbjct: 121 AAAERFRFHHVSTDEVFGDLSLDDNSFREETPYAPSSPYSASKAASDHLVRAWHHTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKL+PL I +E + + +YG+G NVRDWLYV+DH RAL LV Sbjct: 181 VVITNCSNNYGPFHFPEKLVPLIILNALEETPLPVYGNGTNVRDWLYVDDHARALDLVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G GE YNIGG +ER N+ +V I +LD P+ S+ +LI F++DRPGHDRRYA+ Sbjct: 241 NGVTGESYNIGGGSERSNLAVVETICDILDHKQPRRNRRSYRDLIAFVDDRPGHDRRYAM 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+GW P E+ E+GL++T+ WYL N+WWWRP+ Sbjct: 301 DTSKIERELGWKPSESFETGLSRTIDWYLANSWWWRPI 338 >gi|91782041|ref|YP_557247.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] gi|91685995|gb|ABE29195.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] Length = 350 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/348 (53%), Positives = 239/348 (68%), Gaps = 8/348 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNASDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + Sbjct: 62 SALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALGEAG 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKALPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEKKNLEVVHTLCDLLDQLRPKAGGSYHDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 K++ E+GW P E E+GL KTV WYLDN W + +Y KW Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQAW-----SDEVASGEYRKW 344 >gi|304409914|ref|ZP_07391533.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS183] gi|304351323|gb|EFM15722.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS183] Length = 340 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 183/335 (54%), Positives = 238/335 (71%), Gaps = 15/335 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ V+ DKLTYA +L SL I+ S+ + F Q DIC Sbjct: 1 MRVLVTGGAGFIGSALVRMLIEQTTCVVINFDKLTYASDLESLASIADSDRYHFTQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +++ PD +++ AAESHVDRSI G EFI TNI+GT+ILLE +R ++ L+ Sbjct: 61 DRAKLDQVFQDYLPDVVMHLAAESHVDRSINGPAEFIQTNILGTYILLEASRCYFQGLTD 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DK+ FRF ISTDEVYGSL D GLFSE Y PSSPYSA+KAS+D+LV AW TYG+P+ Sbjct: 121 DKQKVFRFHHISTDEVYGSLGDTGLFSETTAYAPSSPYSASKASADHLVRAWHRTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL + + G + +YG+GQ VRDWLYV+DHVRAL+LV+ + Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVLNALAGKQLPVYGNGQQVRDWLYVDDHVRALFLVVTQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----------LIRFIEDRP 288 G +GE YNIGG NER N+++V +I LL+ L+P +H + LI + DR Sbjct: 241 GTVGETYNIGGTNERSNLEVVHQICDLLEELVP---THAQALAADGVGFHSLIEHVTDRA 297 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 GHD RYAID+SKI+ E+GW E +SGL KTV W Sbjct: 298 GHDVRYAIDASKIQRELGWQQLEPFDSGLRKTVEW 332 >gi|146280481|ref|YP_001170634.1| dTDP-glucose 4,6-dehydratase [Pseudomonas stutzeri A1501] gi|145568686|gb|ABP77792.1| dTDP-glucose 4,6-dehydratase [Pseudomonas stutzeri A1501] Length = 329 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/311 (58%), Positives = 229/311 (73%), Gaps = 6/311 (1%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 +L +DKLTYAGNL SL + + + FLQ DI DRE + AL +FQPDAI++ AAESHVD Sbjct: 1 MLNLDKLTYAGNLESLASVEGNPRYQFLQADIADRERVSEALLDFQPDAIMHLAAESHVD 60 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD--KGLF 145 RSI G EFI TNI+GT+ LLE R +W L +++ FRF ISTDEVYG L LF Sbjct: 61 RSIDGPAEFIQTNIVGTYQLLEAARAYWQTLPAERRAAFRFHHISTDEVYGDLHGVDDLF 120 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +E PY PSSPYSA+KASSD+LV AW TYG+PVL++NCSNNYGP+HFPEKLIPL I Sbjct: 121 TETTPYAPSSPYSASKASSDHLVRAWQRTYGLPVLITNCSNNYGPFHFPEKLIPLVILNA 180 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 ++G + +YGDG +RDWL+VEDH RAL+ V+ +G++GE YNIGG+NE+KNI++V I Sbjct: 181 LDGKPLPVYGDGSQIRDWLFVEDHARALFKVVSEGKVGETYNIGGHNEQKNIEVVRGICA 240 Query: 266 LLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 LL+ L P + + +LI F++DRPGHD RYAID+SKI+ E+GW PQE +SGL KTV Sbjct: 241 LLEELAPNKPAGLARYEDLITFVKDRPGHDLRYAIDASKIERELGWVPQETFQSGLRKTV 300 Query: 322 CWYLDNNWWWR 332 WYL+N W R Sbjct: 301 QWYLNNLEWCR 311 >gi|172035535|ref|YP_001802036.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. ATCC 51142] gi|171696989|gb|ACB49970.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. ATCC 51142] Length = 358 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/337 (56%), Positives = 236/337 (70%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + N V+V+D LTYAGN +L ++ F F+Q DICD Sbjct: 10 ILITGGAGFIGSNFVHHWSNHYPDDNVIVLDALTYAGNRQNLVDLEDRQNFKFIQGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I LKE + +FAAESHVDRSILG D FI TN+IGTF LLE R +W+ Q Sbjct: 70 RPLIDKLLKEENITTLAHFAAESHVDRSILGPDAFIQTNVIGTFTLLESFRHYWN--EQG 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + +RFL +STDEVYGSL D FSE PY P+SPYSA+KA SD+L A+ HTY +P Sbjct: 128 KPEDYRFLHVSTDEVYGSLEADDPAFSETTPYAPNSPYSASKAGSDHLARAYFHTYNVPT 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWLYV DH AL V+ K Sbjct: 188 IITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNIRDWLYVGDHCSALETVINK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE KNID+V + L+D L P ELI F++DRPGHDRRYAID Sbjct: 248 GKPGETYNIGGNNEVKNIDLVTLLCNLMDELAPDLPVKPAKELITFVKDRPGHDRRYAID 307 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++KIK+E+GW PQE +E+GL KT+ WYL+N WW+ L Sbjct: 308 ATKIKTELGWTPQETVENGLRKTIEWYLNNQDWWQHL 344 >gi|220924210|ref|YP_002499512.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] gi|219948817|gb|ACL59209.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] Length = 349 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/335 (53%), Positives = 228/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV + VL +D LTYA N SL+ + F + DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQERGHDVLTLDALTYAANPLSLQPLRDDPRHRFAEADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + +EFQP A+++ AAESHVDRSI G FI TN++GT ++LE R + LS Sbjct: 61 DSERVNALFEEFQPQAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHSTRLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL ISTDEVYGSL G F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 GAKQAFRFLHISTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDGQN RDW++VEDH R L VL+ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKPLPVYGDGQNERDWIHVEDHARGLVAVLEG 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG R N+++V + + D L P++ H LI F+ DRPGHDRRYAID Sbjct: 241 GRIGETYLLGGRAVRSNLEVVKTLCAIFDRLRPEAGPHERLITFVTDRPGHDRRYAIDPG 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K + E+GW P + E L TV WYLDN WW+P+ Sbjct: 301 KAERELGWRPTRSFEQALEDTVRWYLDNKDWWQPI 335 >gi|73540418|ref|YP_294938.1| dTDP-glucose 4,6-dehydratase [Ralstonia eutropha JMP134] gi|72117831|gb|AAZ60094.1| dTDP-glucose 4,6-dehydratase [Ralstonia eutropha JMP134] Length = 354 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 183/332 (55%), Positives = 231/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ + D +V +DKLTYAGN +L + F Q DICD Sbjct: 4 ILVTGGAGFIGANFVLAWLRDKAADGIVNVDKLTYAGNRKTLASLDDDGRHVFTQTDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + ++P +V+FAAESHVDRSI G EFI TNI+GTF LLE R +W L + Sbjct: 64 RAALDNLFATYKPRGVVHFAAESHVDRSIHGPSEFIQTNIVGTFTLLEAARAYWGALEEP 123 Query: 122 KKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEV+GSL + FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PV Sbjct: 124 AKSAFRFLHVSTDEVFGSLSEVDPQFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGPYHFPEKLIPL I + G + +YGDG NVRDWLYV DH A+ VL + Sbjct: 184 LTTNCSNNYGPYHFPEKLIPLIIANALAGKPLPVYGDGLNVRDWLYVGDHCSAIREVLAR 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG NE+ N+D+V + LLD L PK+ S+ + I F++DRPGHDRRYAID+ Sbjct: 244 GRLGETYNVGGWNEKTNLDVVHTLCDLLDELKPKAAGSYRDQITFVKDRPGHDRRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+GL KTV WYLDN W Sbjct: 304 RKLERELGWKPAETFETGLRKTVQWYLDNQAW 335 >gi|293602503|ref|ZP_06684949.1| dTDP-glucose 4,6-dehydratase [Achromobacter piechaudii ATCC 43553] gi|292819265|gb|EFF78300.1| dTDP-glucose 4,6-dehydratase [Achromobacter piechaudii ATCC 43553] Length = 357 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/334 (55%), Positives = 234/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IVTGGAGFIGS + V+ +DKLTYAGN +L + F+Q DI Sbjct: 1 MSIIVTGGAGFIGSNFVLDWFVESSEPVVTLDKLTYAGNPENLASLKGRAAHQFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E +P AI+NFAAESHVDRSI G EFI TNI+GTF LLE R +WS L Sbjct: 61 DFDLVSRLLAEHKPRAILNFAAESHVDRSIHGPGEFIQTNIVGTFHLLEAVRGYWSALPD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D++ FRFL +STDEVYGSL+K F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 DERAAFRFLHVSTDEVYGSLEKDDPAFNESNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV DH A+ VL Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVTDHCSAIRRVLA 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G+IGE YNIGG NE+ NI++V + LLD L P+ +S+T+ I F++DRPGHDRRYAI Sbjct: 241 DGKIGETYNIGGWNEKANIEVVRVLCALLDELSPRQDGHSYTDQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+S+++ E+GW P E ESG+ KTV WYL N W Sbjct: 301 DASRLQRELGWTPSETFESGIRKTVLWYLSNQQW 334 >gi|24374680|ref|NP_718723.1| dTDP-glucose 4,6-dehydratase [Shewanella oneidensis MR-1] gi|24349325|gb|AAN56167.1|AE015754_1 dTDP-glucose 4,6-dehydratase [Shewanella oneidensis MR-1] Length = 343 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/338 (52%), Positives = 244/338 (72%), Gaps = 9/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ + VL DKLTYA + SL ++ + + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L++FQPD +++ AAESHVDRSI G EFI TNI+GT+ LLE R ++ L Q Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ +FR ISTDEV+GSL + GLFSE Y+PSSPYSA+KAS+D+LV AW TY +P+ Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL ++ ++ + +YG+GQ VRDWLYV+DHV+ALYLV + Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALYLVATQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--------SYSHTELIRFIEDRPGHD 291 G++G+ YNIGG+ E+ N+ +V I LL+ L+P + +LI+++ DRPGHD Sbjct: 241 GQLGQTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 RYAID+SKI+ E+GW PQE+ ESGL KTV W ++ + Sbjct: 301 VRYAIDASKIQRELGWRPQESFESGLRKTVEWIINQQY 338 >gi|282898467|ref|ZP_06306457.1| dTDP-glucose 4,6-dehydratase [Raphidiopsis brookii D9] gi|281196633|gb|EFA71539.1| dTDP-glucose 4,6-dehydratase [Raphidiopsis brookii D9] Length = 373 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/335 (56%), Positives = 240/335 (71%), Gaps = 7/335 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQVD 58 L+VTGGAGFIGS + V+ +DKLTYA NL +L EI ++ + F+Q D Sbjct: 12 LLVTGGAGFIGSNFVLHARKLGYGNVINLDKLTYASNLQNLVEIERNEKYQDGYRFIQGD 71 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E + L+E++ DA++NFAAE+HVDRSIL FI TN++GTF LLE + +W L Sbjct: 72 IGNYELVSYLLEEYEVDAVINFAAETHVDRSILSPGNFIETNVVGTFKLLEAIKTYWQKL 131 Query: 119 SQDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S K++ FRFL ISTDEVYGSL+ F ED Y P+SPY+A+KAS+D+LV ++ HTYG Sbjct: 132 SSKKQESFRFLHISTDEVYGSLNTEDPAFREDSQYAPNSPYAASKASADHLVRSYHHTYG 191 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P L +NCSNNYGP FPEKLIPL I I G + +YGDGQN+RDWLYV DH A+YLV Sbjct: 192 LPTLTTNCSNNYGPLQFPEKLIPLMIINAINGKSLPIYGDGQNIRDWLYVTDHCDAIYLV 251 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYA 295 L++GRIGE YNIGG NE+ N+ +V +I +L+ L PK +Y ++ LI FI+DRPGHDRRYA Sbjct: 252 LQEGRIGENYNIGGMNEKTNLAVVNKICEILERLAPKPNYEYSSLITFIKDRPGHDRRYA 311 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID SKI E+GW P+EN ESGL KTV WYLDN W Sbjct: 312 IDCSKISKELGWQPKENFESGLIKTVRWYLDNAAW 346 >gi|260579964|ref|ZP_05847794.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae RdAW] gi|1172921|sp|P44914|RMLB_HAEIN RecName: Full=dTDP-glucose 4,6-dehydratase gi|1573891|gb|AAC22531.1| DTDP-glucose 4,6-dehydratase (rffG) [Haemophilus influenzae Rd KW20] gi|260093248|gb|EEW77181.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae RdAW] Length = 338 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 243/334 (72%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG+GFIGSAL RY++N + V+ IDKLTYA N ++L+E+ + + F +VDIC Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + +++QPDA+++ AAESHVDRSI GA +F+ TNI+GT+ LLE + +W L + Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+S++LV AW TYG+P Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y EKLIPL I+ + G + +YGDGQ +RDWL+VEDHV+A YLVL Sbjct: 182 VIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVLT 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P +H +L+ F++DRPGHD RY Sbjct: 242 KGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHDVRY 301 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW PQ E GL +TV WYL N+ Sbjct: 302 SLDCSKIHAELGWQPQITFEQGLRQTVKWYLFNS 335 >gi|104783689|ref|YP_610187.1| dTDP-D-glucose-4,6-dehydratase [Pseudomonas entomophila L48] gi|95112676|emb|CAK17404.1| dTDP-D-glucose-4,6-dehydratase [Pseudomonas entomophila L48] Length = 339 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 176/323 (54%), Positives = 228/323 (70%), Gaps = 6/323 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R+L+ + V +D LTYAGNL SL ++ S + F Q DICD+ ++ EFQP Sbjct: 1 MVRHLIQNTDNHVANVDVLTYAGNLESLASVADSERYRFYQADICDKAHLQRIFAEFQPQ 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 A+++ AAESHVDRSI G D FI TN++GT LLE R +W+ L+ + + FRF ISTDE Sbjct: 61 AVMHLAAESHVDRSIEGPDAFIRTNVLGTATLLEVARGYWNGLAPEARAAFRFHHISTDE 120 Query: 136 VYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 V+G L+ F+E PY PSSPYSA+KA SD+LV AWG TYG+PVL++NCSNNYGP+HF Sbjct: 121 VFGDLEGTDDFFTEQTPYAPSSPYSASKAGSDHLVRAWGRTYGLPVLVTNCSNNYGPHHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIP I + G + +YG+G VRDWL+VEDH RALY VL +G +G+ YNIGG+NE Sbjct: 181 PEKLIPHVILNALHGKPLPVYGNGAQVRDWLHVEDHARALYTVLTRGEVGQTYNIGGHNE 240 Query: 254 RKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R+N+D+V I LL+ L P ++++LI F+ DRPGHD RYAID+SKI E+GW P Sbjct: 241 RRNLDVVQGICALLEELQPNKPEGVQAYSDLIEFVSDRPGHDLRYAIDASKIADELGWTP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWR 332 QE E+GL KTV WYLDN WW+ Sbjct: 301 QETFETGLRKTVQWYLDNRGWWQ 323 >gi|255321117|ref|ZP_05362283.1| dTDP-glucose 4,6-dehydratase [Acinetobacter radioresistens SK82] gi|255301671|gb|EET80922.1| dTDP-glucose 4,6-dehydratase [Acinetobacter radioresistens SK82] Length = 355 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 244/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGSA+ R++V + + +VL +DKLTYAGNL SL ++ + F Q DIC Sbjct: 1 MKFLVTGGAGFIGSAVVRHIVQNTEHEVLNVDKLTYAGNLESLSSVADHPRYQFSQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + K FQPD +++ AAESHVDRSI G FI TNIIGT+ +LE +R +W L Sbjct: 61 DRTALDELFKSFQPDVVMHLAAESHVDRSISGPYAFIETNIIGTYQMLEASRTYWLTLDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK+ FRF ISTDEVYG L+ LF+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 SKKETFRFHHISTDEVYGDLEGTTDLFTETTSYSPSSPYSASKASSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGP+HFPEKLIPL I ++ + +YG+GQ +RDWL+VEDH RAL+ V Sbjct: 181 VLVTNCSNNYGPFHFPEKLIPLMILNALQAKPLPVYGNGQQIRDWLFVEDHARALFTVAT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +GE YNIGG+NE+ NI++V I LL+ L P + +LI +++DRPGHD RY Sbjct: 241 QGVVGETYNIGGHNEKANIEVVHAICTLLEELAPNKPEGVAQYKDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KIK+++GW PQE+ E+GL KTV WYL N W Sbjct: 301 AIDATKIKNDLGWVPQESFETGLRKTVEWYLSNTEW 336 >gi|30995408|ref|NP_439034.2| dTDP-glucose 46-dehydratase [Haemophilus influenzae Rd KW20] Length = 337 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 243/334 (72%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG+GFIGSAL RY++N + V+ IDKLTYA N ++L+E+ + + F +VDIC Sbjct: 1 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + +++QPDA+++ AAESHVDRSI GA +F+ TNI+GT+ LLE + +W L + Sbjct: 61 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+S++LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y EKLIPL I+ + G + +YGDGQ +RDWL+VEDHV+A YLVL Sbjct: 181 VIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P +H +L+ F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI +E+GW PQ E GL +TV WYL N+ Sbjct: 301 SLDCSKIHAELGWQPQITFEQGLRQTVKWYLFNS 334 >gi|269102099|ref|ZP_06154796.1| dTDP-glucose 4,6-dehydratase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161997|gb|EEZ40493.1| dTDP-glucose 4,6-dehydratase [Photobacterium damselae subsp. damselae CIP 102761] Length = 353 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/337 (55%), Positives = 243/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL + ++F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLLSVENDERYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI G FI TNIIGT+ +LE R +W+ L Sbjct: 61 DRAELDRIFAKHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTMLEAARQYWNQLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K FRF ISTDEVYG L+ LF+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 DHKSAFRFHHISTDEVYGDLEGTDDLFTETTSYSPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG+G +RDWLYVEDH ALY V+ Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMILNALEGKQLPVYGNGMQIRDWLYVEDHASALYTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G IGE YNIGG+NE+ NI++V I LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 QGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPQGIAQYQDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID++KI +E+GW P E ESG+ KTV WYL+N WW Sbjct: 301 AIDATKIAAELGWKPAETFESGIRKTVEWYLNNEKWW 337 >gi|172059821|ref|YP_001807473.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MC40-6] gi|171992338|gb|ACB63257.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MC40-6] Length = 353 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + S F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRQSDEAVLNVDKLTYAGNLRTLQSLDGSPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E+QP A+++FAAESHVDRSI G EF+ TN++GTF LLE R +W+ L++ Sbjct: 62 AALDALFAEYQPRAVLHFAAESHVDRSIHGPAEFVQTNVVGTFTLLEAARTYWNGLNEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 RSAFRFLHVSTDEVFGSLSAADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKALPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDQARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVAWYLDNQVWVDEV-----ASGEYRKWVETN 348 >gi|154253744|ref|YP_001414568.1| dTDP-glucose 4,6-dehydratase [Parvibaculum lavamentivorans DS-1] gi|154157694|gb|ABS64911.1| dTDP-glucose 4,6-dehydratase [Parvibaculum lavamentivorans DS-1] Length = 356 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/337 (53%), Positives = 238/337 (70%), Gaps = 3/337 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+IVTGGAGFIGSA+ R L+N+ + +VL +D LTYA + +L + + + F DI Sbjct: 1 MRVIVTGGAGFIGSAVIRLLINETEHEVLNLDCLTYASDQAALSSVCEHPRYRFSHTDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +R ++++P +++ AAESHVDRSI +FI TN++GT LLE R +WS L Sbjct: 61 KPDALRRVFRDYRPHLVMHLAAESHVDRSIDAPADFIETNVVGTVNLLETARSYWSSLDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRF +STDEVYGSL +G F+E+ Y P+SPYSA+KA+SD++V AW TYGIPV Sbjct: 121 AEKRAFRFHHVSTDEVYGSLGAEGYFTEETAYAPNSPYSASKAASDHMVRAWHATYGIPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNCSNN+GP+ FPEKLIPL I IEG + +YG+G N+RDWL+VEDH RAL + + Sbjct: 181 VTSNCSNNFGPHQFPEKLIPLTIINAIEGKSLPVYGNGMNIRDWLFVEDHARALMTIALR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 GR+GE YN+GG+ ER NI++V I LLD ++P S H LIRF+ DRPGHD RYAID Sbjct: 241 GRVGETYNVGGDAERTNIEVVRSICSLLDEILPHSSFRPHENLIRFVADRPGHDMRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +SKI+ E+GW P E+ ESGL KTV WY+DN W L Sbjct: 301 TSKIRRELGWQPVESFESGLRKTVEWYIDNRAIWTRL 337 >gi|303326680|ref|ZP_07357122.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. 3_1_syn3] gi|302862668|gb|EFL85600.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. 3_1_syn3] Length = 359 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/341 (53%), Positives = 249/341 (73%), Gaps = 9/341 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGSA+ R +++ +V+ +DKLTY+GN SL +++ + ++F+Q DI D Sbjct: 5 LLVTGGAGFIGSAVVREMLSASAWRVVNVDKLTYSGNPASLADVADNPRYNFIQADIADA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD- 121 +R+A + F+PDA+++ AAESHVDRSI F+ TN+ GTF+LLEE R +W L+ Sbjct: 65 AAMRAAFEIFEPDAVMHLAAESHVDRSIDSPAAFLETNVHGTFVLLEEARRYWKSLTASG 124 Query: 122 --KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K FRF ISTDEV+G L +G F+E+ PY PSSPYSA+KA+SD+LV AW TYG+ Sbjct: 125 SPKARDFRFHHISTDEVFGDLSGGQGFFTEETPYAPSSPYSASKAASDHLVRAWQRTYGL 184 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++NCSNNYGP FPEKLIPL I + G + +YGDG +RDWL+VEDHVRAL LVL Sbjct: 185 PTLVTNCSNNYGPRQFPEKLIPLTILNALAGRELPVYGDGGQIRDWLHVEDHVRALLLVL 244 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRR 293 +GR+GE Y +GG+ E++NID+V I LL+ ++P+ + + +LIRF+ DRPGHD R Sbjct: 245 ARGRVGETYAVGGHCEKRNIDVVRAICELLEEMVPQKPAGVSRYADLIRFVRDRPGHDGR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 YAID+SKI +E+GW P+E+ +GL KTVCWYLDN WWR + Sbjct: 305 YAIDASKIAAELGWRPRESFATGLRKTVCWYLDNEAWWRAV 345 >gi|325527146|gb|EGD04549.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. TJI49] Length = 353 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/352 (52%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + + VL +DKLTYAGNL +L+ ++ + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRESGEAVLNVDKLTYAGNLRTLQSLNGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALPEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLDA PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDAQRPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVAWYLDNQAW-----ADEVASGEYRKWVETN 348 >gi|86748687|ref|YP_485183.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gi|86571715|gb|ABD06272.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 353 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/334 (54%), Positives = 230/334 (68%), Gaps = 3/334 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R I+TGGAGFIGSA+ R L+ +VLV+DKLTYAGNL SL +S F F + DI D Sbjct: 4 RFIITGGAGFIGSAVVRRLIETTGHEVLVVDKLTYAGNLESLAPVSSDPRFRFERADIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 IR + +F PD +++ AAESHVDRSI G EFI TN++GTF+LL+ W L D Sbjct: 64 AGAIRRIVADFSPDVVMHLAAESHVDRSIDGPAEFIQTNVVGTFVLLQAALAHWRALPAD 123 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K FRF ISTDEV+GSL G F E Y P+SPYSA+KA SD+LV AW HTYG+P L Sbjct: 124 RKAGFRFHHISTDEVFGSLGPTGYFDEQTAYQPNSPYSASKAGSDHLVRAWHHTYGLPTL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPY FPEKLI L I +EG + +YG G NVRDWL+V+DH AL LV +G Sbjct: 184 MTNCSNNYGPYQFPEKLIALTIINALEGKPLPVYGAGTNVRDWLHVDDHAEALLLVAAEG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 +G+ YNIGG+NE N+ +V +I ++D L P S +LI F+ DRPGHD RYAID+ Sbjct: 244 AVGDSYNIGGHNEHTNLSVVRDICRIVDELAPDSAIGPREQLIAFVVDRPGHDLRYAIDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI ++GW P+ + E+GL +TV WY+ N WW+ Sbjct: 304 SKIGRDLGWRPRYDFETGLRRTVQWYVANVDWWK 337 >gi|5545317|dbj|BAA82532.1| dTDP-D-glucose 4,6-dehydratase [Actinobacillus actinomycetemcomitans] Length = 355 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/335 (56%), Positives = 250/335 (74%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ + + ++F QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRYIIENTQDSVVNVDKLTYAGNLESLEAVKNNPRYTFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ +PDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +W+ L+ +K Sbjct: 65 KALARIFQQHRPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAARAYWNSLNDEK 124 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG LD LF E PY+PSSPYSA+KASSD+LV AW TY +P + Sbjct: 125 KAVFRFHHISTDEVYGDLDGTNNLFIETTPYSPSSPYSASKASSDHLVRAWLRTYSLPTI 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP+HFPEKLIPL I ++G + +YG+GQ +RDWL+VEDH RALY V+ +G Sbjct: 185 VTNCSNNYGPFHFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFVEDHARALYKVVAEG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI +++DRPGHD RYAI Sbjct: 245 KIGETYNIGGHNEKANIDVVRTICALLEELVPNKPAGVTKYEDLITYVKDRPGHDVRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 DATKISRELGWKPQETFESGIRKTVEWYLNNRKWW 339 >gi|323525014|ref|YP_004227167.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1001] gi|323382016|gb|ADX54107.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1001] Length = 353 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNTSDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L + + Sbjct: 62 AAMDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARTYWNTLGEAE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDKLQPKAGGSYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|220925352|ref|YP_002500654.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] gi|219949959|gb|ACL60351.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] Length = 349 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/335 (53%), Positives = 228/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV + VL +D LTYA N SL+ + F + DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQERGHDVLTLDALTYAANPLSLQPLRDDPRHRFAEADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + +EFQP A+++ AAESHVDRSI G FI TN++GT ++LE R + LS Sbjct: 61 DPERVNALFEEFQPQAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHSTRLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEVYGSL G F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 GAKQAFRFLHVSTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDGQN RDW++VEDH R L VL+ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKPLPVYGDGQNERDWIHVEDHARGLVAVLEG 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG R N+++V + + D L P++ H LI F+ DRPGHDRRYAID Sbjct: 241 GRIGETYLLGGRAVRSNLEVVKTLCAIFDRLRPEAGPHERLITFVTDRPGHDRRYAIDPG 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K + E+GW P + E L TV WYLDN WW+P+ Sbjct: 301 KAERELGWRPTRSFEQALEDTVRWYLDNKDWWQPI 335 >gi|160876126|ref|YP_001555442.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS195] gi|160861648|gb|ABX50182.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS195] Length = 340 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 235/332 (70%), Gaps = 9/332 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ V+ DKLTYA +L SL I+ S + F+Q DI Sbjct: 1 MRVLVTGGAGFIGSALVRMLIEQTTCVVINFDKLTYASDLESLASIADSERYHFIQADIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +++ PD +++ AAESHVDRSI G EFI TNI+GT+ LLE R ++ L+ Sbjct: 61 DRAKLDQVFQDYLPDVVMHLAAESHVDRSINGPAEFIQTNIVGTYTLLEACRCYFQSLNT 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DK+ FRF ISTDEVYGSL D GLFSE Y+PSSPYSA+KAS+D+LV AW TYG+P+ Sbjct: 121 DKQKVFRFHHISTDEVYGSLGDTGLFSETTAYDPSSPYSASKASADHLVRAWHRTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL + + G + +YG+GQ VRDWLYV+DHVRAL+LV+ + Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVLNALAGKQLPVYGNGQQVRDWLYVDDHVRALFLVVTQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--------SYSHTELIRFIEDRPGHD 291 G +GE YNIGG NER N+++V +I LL+ L+P L+ + DR GHD Sbjct: 241 GTVGETYNIGGTNERSNLEVVHQICDLLEELVPTHAQALAADGVGFRSLVEHVTDRAGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 RYAID+SKI+ E+GW P E+ +SGL KTV W Sbjct: 301 VRYAIDASKIQRELGWQPLESFDSGLRKTVEW 332 >gi|257058397|ref|YP_003136285.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8802] gi|256588563|gb|ACU99449.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8802] Length = 355 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/341 (54%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +L++TGGAGFIGS + + +++V+D LTYAGN +L + F F+Q +IC Sbjct: 5 KLLITGGAGFIGSNFVHHWYHQYPYHRIIVLDALTYAGNRQNLASLEGKENFRFVQGNIC 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I S L+E D + +FAAESHVDRSILG D FI TN+IGTF LLE R +W+ Q Sbjct: 65 DRPLIDSLLREENIDIVAHFAAESHVDRSILGPDAFIQTNVIGTFTLLESFRHYWN--EQ 122 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ + +RFL +STDEVYGSL+ F+E PY P+SPYSA+KA SD+L A+ HTY +P Sbjct: 123 NQPENYRFLHVSTDEVYGSLNPEDPAFTETTPYAPNSPYSASKAGSDHLARAYYHTYNVP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQNVRDWLYV DH AL V++ Sbjct: 183 TIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVGDHCSALETVIQ 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 KG GE YNIGGNNE KNID+V + L+D L P +LI F++DRPGHDRRYAI Sbjct: 243 KGNPGETYNIGGNNEVKNIDLVTLLCDLMDELAPNLPVKPSKQLITFVKDRPGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D++KIK+E+GW PQE +E GL KT+ WYL++ WW+PL + Sbjct: 303 DATKIKTELGWTPQETVEGGLRKTIEWYLNHQDWWQPLLSQ 343 >gi|16588694|gb|AAL26872.1|AF315583_1 dTDP-D-glucose-4,6-dehydratase [Acinetobacter calcoaceticus] Length = 343 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/342 (54%), Positives = 248/342 (72%), Gaps = 6/342 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + +VL +DKLTYAGNL SL ++ ++ + F Q DIC Sbjct: 1 MKILITGGAGFIGSAVIRHIIQNTENEVLNVDKLTYAGNLESLLSVASNSRYKFSQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + FQPDAI++ AAESHVDRSI G FI TNIIGT+ +LE +R +W L + Sbjct: 61 DRSALDQLFSSFQPDAIMHLAAESHVDRSITGPYAFIETNIIGTYQMLEASRCYWLSLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRF ISTDEVYG L+ LF+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EKKAAFRFHHISTDEVYGDLEGTTDLFTETTSYSPSSPYSASKASSDHLVRAWNRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++NCSNNYGPYH PEKLIP+ I ++G + +YG+GQ +RDWL+VEDH RAL+ V+ Sbjct: 181 VLITNCSNNYGPYHLPEKLIPMMILNALQGKSLPVYGNGQQIRDWLFVEDHARALFTVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G +G YNIGG+NE+ N+D+V I LL+ P ++ +LI +++DRPGHD RY Sbjct: 241 QGAVGXTYNIGGHNEKANLDVVHAICELLEEFAPNKPEGIATYKDLITYVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 AID++KIK E+ W PQE+ E+GL KTV WYL N W + K Sbjct: 301 AIDATKIKKELNWVPQESFETGLRKTVEWYLSNTEWVEHVXK 342 >gi|219871176|ref|YP_002475551.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis SH0165] gi|219691380|gb|ACL32603.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis SH0165] Length = 334 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/327 (54%), Positives = 242/327 (74%), Gaps = 6/327 (1%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + RY++N+ + V+ IDKLTYAGNL+SL+EIS S+ ++F Q+DICD+ + E+QPD Sbjct: 1 MIRYIINNTQDLVINIDKLTYAGNLSSLEEISNSSRYAFKQIDICDKIALEQIFNEYQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI ++ FI TNI GT+ LLE R +W+ L ++KK FRF ISTDE Sbjct: 61 IVMHLAAESHVDRSIKNSEVFIKTNIWGTYTLLEVARKYWNDLPEEKKSIFRFHHISTDE 120 Query: 136 VYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 VYG L + F+E MPY PS+PYSA+KA+SD+LV AW TYG+P +++NCSNNYGP+HF Sbjct: 121 VYGDLGTSERQFTEIMPYAPSNPYSASKAASDHLVHAWRRTYGVPTIVTNCSNNYGPFHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I IEG + +YG+G VRDWL+VEDHVRALY V+K+GR+GE YNIGG++ Sbjct: 181 PEKLIPLIILNAIEGKKLPIYGNGLQVRDWLFVEDHVRALYKVIKEGRVGESYNIGGDST 240 Query: 254 RKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 + N+++V+ I +L+ L+P + +LI ++ DR GHD RYAIDS+KI+ E+ W P Sbjct: 241 KSNLEVVYAICEILEELLPHKPKGVQKYKDLISYVPDRLGHDTRYAIDSTKIREELDWKP 300 Query: 310 QENMESGLNKTVCWYLDNNWWWRPLYK 336 QE ESG+ KTV WYL+N WW+ + K Sbjct: 301 QETFESGIRKTVEWYLNNQKWWKSIRK 327 >gi|218960618|ref|YP_001740393.1| dTDP-glucose 4,6-dehydratase [Candidatus Cloacamonas acidaminovorans] gi|167729275|emb|CAO80186.1| dTDP-glucose 4,6-dehydratase [Candidatus Cloacamonas acidaminovorans] Length = 356 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/339 (53%), Positives = 243/339 (71%), Gaps = 8/339 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQ 56 R+IVTGGAGFIG+ L D ++L IDKLTYAGNL SL+++ ++ + F Q Sbjct: 3 RVIVTGGAGFIGANYLHTLFADPSFTGKILNIDKLTYAGNLESLQDLEAKYGNSRYFFEQ 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD ++ + +FQPD IV+FAAESHVDRSI G EF+ TN++GT LL ++ Sbjct: 63 ADICDAPKMKEIMHQFQPDTIVHFAAESHVDRSIDGPMEFVQTNLVGTATLLNSALEYYR 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L ++ K +FRF +STDEV+GSL + G+F+E+ PY+PSSPYSA+KA SD+LV AW T+ Sbjct: 123 TLDEEAKKRFRFHNVSTDEVFGSLGENGMFTEETPYDPSSPYSASKAGSDHLVRAWQRTF 182 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ +SNCSNNYGPY FPEKLIPL I + + +YG G NVRDWL+V DH A+ + Sbjct: 183 GLPITISNCSNNYGPYQFPEKLIPLMILNCLAHQPLPVYGKGINVRDWLFVTDHCEAINI 242 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRR 293 +++KG++GE YNIGG+NE KNIDIV I +LD + P K S+TELI F++DRPGHD R Sbjct: 243 IIRKGKVGETYNIGGHNEMKNIDIVTTICKILDEMEPSKKLKSYTELITFVQDRPGHDLR 302 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAID++KI+ E+GW P E +G+ KTV WYL+N WW+ Sbjct: 303 YAIDATKIEKELGWKPAETFATGIRKTVAWYLENKQWWQ 341 >gi|170692122|ref|ZP_02883286.1| dTDP-glucose 4,6-dehydratase [Burkholderia graminis C4D1M] gi|170143406|gb|EDT11570.1| dTDP-glucose 4,6-dehydratase [Burkholderia graminis C4D1M] Length = 353 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 239/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNTSDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L + Sbjct: 62 AAMDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNTLDEAA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDTLRPKTAGSYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|315268323|gb|ADT95176.1| dTDP-glucose 4,6-dehydratase [Shewanella baltica OS678] Length = 349 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 235/332 (70%), Gaps = 9/332 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R L+ V+ DKLTYA +L SL I+ S + F+Q DI Sbjct: 10 MRVLVTGGAGFIGSALVRMLIEQTTCVVINFDKLTYASDLESLASIADSERYHFIQADIG 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +++ PD +++ AAESHVDRSI G EFI TNI+GT+ LLE R ++ L+ Sbjct: 70 DRAKLDQVFQDYLPDVVMHLAAESHVDRSINGPAEFIQTNIVGTYTLLEACRCYFQSLNT 129 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DK+ FRF ISTDEVYGSL D GLFSE Y+PSSPYSA+KAS+D+LV AW TYG+P+ Sbjct: 130 DKQKVFRFHHISTDEVYGSLGDTGLFSETTAYDPSSPYSASKASADHLVRAWHRTYGLPI 189 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL + + G + +YG+GQ VRDWLYV+DHVRAL+LV+ + Sbjct: 190 VITNCSNNYGPFQYPEKLIPLMVLNALAGKQLPVYGNGQQVRDWLYVDDHVRALFLVVTQ 249 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--------SYSHTELIRFIEDRPGHD 291 G +GE YNIGG NER N+++V +I LL+ L+P L+ + DR GHD Sbjct: 250 GTVGETYNIGGTNERSNLEVVHQICDLLEELVPTHAQALAADGVGFRSLVEHVTDRAGHD 309 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 RYAID+SKI+ E+GW P E+ +SGL KTV W Sbjct: 310 VRYAIDASKIQRELGWQPLESFDSGLRKTVEW 341 >gi|209518630|ref|ZP_03267448.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. H160] gi|209500913|gb|EEA00951.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. H160] Length = 353 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 241/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ ++ VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLDASDEAVLNVDKLTYAGNLGTLKSLQGNPKHIFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + Sbjct: 62 AALDALLAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRSYWNALGDAE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 RAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKRLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEKKNLEVVHTLCDLLDKQRPKAAGSYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQQWVDEV-----ASGEYRKWVETN 348 >gi|93005454|ref|YP_579891.1| dTDP-glucose 4,6-dehydratase [Psychrobacter cryohalolentis K5] gi|92393132|gb|ABE74407.1| dTDP-glucose 4,6-dehydratase [Psychrobacter cryohalolentis K5] Length = 365 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 246/352 (69%), Gaps = 18/352 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGSA+ R+L+ + ++ +DKLTYAGNL S +S ++ ++F QVDIC Sbjct: 1 MKFLITGGAGFIGSAVVRHLLQHTQNSLMNLDKLTYAGNLESCDPVSDNSRYTFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +QPD +++ AAESHVDRSI D+FI TNI+GT+ +LE R +WS LS Sbjct: 61 NPTELARVFERYQPDVVMHLAAESHVDRSIDAPDDFIRTNIVGTYNMLEAARAYWSHLSS 120 Query: 121 DKKDQFRFLQISTDEVYG------------SLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 ++K FRF ISTDEVYG S+ + LF+E Y PSSPYSA+KASSD+LV Sbjct: 121 ERKQIFRFHHISTDEVYGDLPHPDKLENPNSVGEYLFTETTSYAPSSPYSASKASSDHLV 180 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW TYG+PV+++NCSNNYGPYHFPEKL+P I + G + +YGDG +RDWLYVED Sbjct: 181 RAWYRTYGLPVVITNCSNNYGPYHFPEKLVPHIILNALAGKSLPVYGDGSQIRDWLYVED 240 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI----PKSYSHTE-LIRF 283 H RAL V +G +GE YNIGG+NE++NID+V + LL+ + P + E LI F Sbjct: 241 HARALIKVATEGVVGETYNIGGHNEKRNIDVVLILCALLEEMASDQKPAGIAKYEDLIVF 300 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPL 334 ++DR GHD RYAID+SKI+ E+ W P+E+ E+G+ KTV WYLDN NWW R L Sbjct: 301 VKDRAGHDVRYAIDASKIERELDWVPEESFETGMRKTVQWYLDNKNWWQRVL 352 >gi|188581604|ref|YP_001925049.1| dTDP-glucose 4,6-dehydratase [Methylobacterium populi BJ001] gi|179345102|gb|ACB80514.1| dTDP-glucose 4,6-dehydratase [Methylobacterium populi BJ001] Length = 352 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 229/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F+PDA+++ AAESHVDRSI F+ TN+IGT ++L+ R W LS Sbjct: 61 DPSRVHALYAAFRPDAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 AAKANFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG + R N+++V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRIGETYLLGGRSVRNNLEVVKALCAAFDRLRPENGPHEHLITFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWQPTKVFEQALEETVRWYLDNEAWWRPI 335 >gi|238789363|ref|ZP_04633149.1| dTDP-glucose 4,6-dehydratase [Yersinia frederiksenii ATCC 33641] gi|238722506|gb|EEQ14160.1| dTDP-glucose 4,6-dehydratase [Yersinia frederiksenii ATCC 33641] Length = 327 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/311 (57%), Positives = 228/311 (73%), Gaps = 6/311 (1%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++V+DKLTYAGNL SL ++QS ++F +VDICDR + ++QPDA+++ AAESHVD Sbjct: 1 MVVVDKLTYAGNLESLAVVAQSERYAFERVDICDRAELDRVFAQYQPDAVMHLAAESHVD 60 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD--KGLF 145 RSI G F+ TNI+GT+ +LE R +W LS + K FRF ISTDEVYG L LF Sbjct: 61 RSIDGPAAFVETNIMGTYQMLEAARHYWQQLSAEAKLAFRFHHISTDEVYGDLHGTDDLF 120 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +E PY PSSPYSA+KASSD+LV AW TYG P L++NCSNNYGPYHFPEKLIPL I Sbjct: 121 TETTPYAPSSPYSASKASSDHLVRAWLRTYGFPTLVTNCSNNYGPYHFPEKLIPLVILNA 180 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 + G + +YG+G VRDWLYVEDH RALY V+ +G +GE YNIGG+NERKNI++V I Sbjct: 181 LAGKPLPVYGNGAQVRDWLYVEDHARALYQVVTEGVVGETYNIGGHNERKNIEVVETICT 240 Query: 266 LLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 LLD L+P+ + + +LI +++DRPGHD RYAID+ KI+ E+GW PQE +SG+ KT+ Sbjct: 241 LLDELVPEKPAGIARYRDLITYVKDRPGHDMRYAIDAGKIERELGWKPQETFDSGIRKTI 300 Query: 322 CWYLDNNWWWR 332 WYL+N WWR Sbjct: 301 DWYLNNESWWR 311 >gi|166368500|ref|YP_001660773.1| dTDP-glucose 4,6-dehydratase [Microcystis aeruginosa NIES-843] gi|166090873|dbj|BAG05581.1| dTDP-glucose 4,6-dehydratase [Microcystis aeruginosa NIES-843] Length = 358 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/337 (55%), Positives = 234/337 (69%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + N + +V+V+D LTYAGNLN+L + F FLQ DICD Sbjct: 10 IVITGGAGFIGSNFVHHWCENYPEDRVIVLDALTYAGNLNNLATLKDRKNFRFLQGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + D + +FAAESHVDRSILG F+ TN++GTF LLE R W LS Sbjct: 70 RALVDELFAGENIDTVAHFAAESHVDRSILGPGAFVQTNVVGTFTLLESFRQHW--LSNH 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+L A+ HTYG+P Sbjct: 128 QPDNYRFLHVSTDEVYGSLGVDDPAFTETTPYAPNSPYSASKAGSDHLARAYFHTYGMPT 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYG YHFPEKLIPL ++ G + +YGDGQNVRDWLYV DH +AL V+ K Sbjct: 188 IITNCSNNYGSYHFPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVRDHCQALDTVIHK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE KNID+V + L+D L P LI F+ DRPGHDRRYAID Sbjct: 248 GKAGETYNIGGNNEVKNIDLVRMLCDLMDELAPDLPVKPAQNLITFVRDRPGHDRRYAID 307 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +SKI++E+GW PQE +E GL KT+ WYLD+ WW+PL Sbjct: 308 ASKIRTELGWQPQETVEGGLRKTIQWYLDHRDWWQPL 344 >gi|254558141|ref|YP_003065666.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] gi|254265684|emb|CAX17025.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] Length = 352 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 227/335 (67%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL + Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLDPLKGDARHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F+PDA+++ AAESHVDRSI F+ TN+IGT ++L+ R W LS Sbjct: 61 DPARVHALYAAFKPDAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKQNFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VLK+ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLKR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P+S H LI F+ DRPGHDRRYAID + Sbjct: 241 GRLGETYLLGGRSVRNNLAVVKALCAAFDRLRPESGPHERLITFVADRPGHDRRYAIDPA 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEQALEETVRWYLDNEAWWRPI 335 >gi|307728803|ref|YP_003906027.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1003] gi|307583338|gb|ADN56736.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. CCGE1003] Length = 353 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 239/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNTSDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L + Sbjct: 62 AAMDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNTLGEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDKLRPKAAGSYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVQWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|23013428|ref|ZP_00053323.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magnetotacticum MS-1] Length = 354 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL +S + Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLAPLSDNPNHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F+PDA+++ AAESHVDRSI F+ TN+IGT ++L+ R W LS Sbjct: 61 DPARVHALYAAFKPDAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +FRFL +STDEVYGSL + F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 QAKARFRFLHVSTDEVYGSLPPEAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRVGETYLLGGRSVRNNLAVVKGLCAAFDRLRPENGPHERLITFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEEALEETVRWYLDNEAWWRPI 335 >gi|67922231|ref|ZP_00515745.1| dTDP-glucose 4,6-dehydratase [Crocosphaera watsonii WH 8501] gi|67855934|gb|EAM51179.1| dTDP-glucose 4,6-dehydratase [Crocosphaera watsonii WH 8501] Length = 358 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 188/341 (55%), Positives = 240/341 (70%), Gaps = 15/341 (4%) Query: 3 LIVTGGAGFIGSAL----CRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++TGGAGFIGS C+ +D QV+V+D LTYAGN +L ++ F F+Q D Sbjct: 10 ILITGGAGFIGSNFVHHWCQNYSDD---QVIVLDALTYAGNRQNLADLENRKQFKFIQGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICDR I LKE Q + +FAAESHVDRSILG D F+ TN+IGTF LLE R +W+ Sbjct: 67 ICDRPLIEKILKEEQVTTVAHFAAESHVDRSILGPDAFVQTNVIGTFTLLESFRHYWN-- 124 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + RFL +STDEVYGSL D FSE PY P+SPYSA+KA SD+L A+ HTY Sbjct: 125 EQGNPENSRFLHVSTDEVYGSLEADDPAFSEVTPYAPNSPYSASKAGSDHLARAYFHTYN 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWLYV DH AL V Sbjct: 185 LPTIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNIRDWLYVGDHCSALETV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSHTELIRFIEDRPGHDRR 293 + KG+ GE YNIGGNNE KNID+V + L+D L +P + ELI F++DRP HDRR Sbjct: 245 INKGKAGETYNIGGNNEVKNIDLVTMLCELMDELASDLPVKPA-KELITFVKDRPSHDRR 303 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 YAID++KIK+E+GW P+E +E+GL KT+ WYL++ WW+PL Sbjct: 304 YAIDATKIKTELGWTPKETVENGLRKTIEWYLNDQKWWQPL 344 >gi|238765343|ref|ZP_04626268.1| dTDP-glucose 4,6-dehydratase [Yersinia kristensenii ATCC 33638] gi|238696430|gb|EEP89222.1| dTDP-glucose 4,6-dehydratase [Yersinia kristensenii ATCC 33638] Length = 325 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/309 (57%), Positives = 226/309 (73%), Gaps = 6/309 (1%) Query: 30 VIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRS 89 ++DKLTYAGNL SL ++ S ++F QVDICDR + +++PD +++ AAESHVDRS Sbjct: 1 MVDKLTYAGNLESLAVVAHSERYAFEQVDICDRTELDRVFAQYRPDVVMHLAAESHVDRS 60 Query: 90 ILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD--KGLFSE 147 I G FI TN++GT+ +LE R +W LS + K FRF ISTDEVYG L LF+E Sbjct: 61 IDGPAAFIETNVLGTYQMLEAARHYWQQLSAEGKLAFRFHHISTDEVYGDLHGTDDLFTE 120 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 PY PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I + Sbjct: 121 TTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALA 180 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YG+G VRDWLYVEDH RALY V+ +G +GE YNIGG+NERKNI++V I LL Sbjct: 181 GKPLPVYGNGAQVRDWLYVEDHARALYQVVTEGVVGETYNIGGHNERKNIEVVETICTLL 240 Query: 268 DALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D L+P+ + + +LI +++DRPGHD RYAID+SKI+ E+GW PQE ESG+ KTV W Sbjct: 241 DELVPEKPAGIAHYRDLITYVKDRPGHDMRYAIDASKIERELGWRPQETFESGIRKTVLW 300 Query: 324 YLDNNWWWR 332 YL+N WWR Sbjct: 301 YLNNESWWR 309 >gi|45478498|gb|AAS66622.1| RmlB [Aeromonas caviae] Length = 354 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 23/352 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYA + SL +S S+ + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIRYTRDSVVNLDKLTYAADPASLASVSTSDRYVFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + QPDA+++ AAESHVDRSI G +FI TNI+GT++LLE R +W+ L + Sbjct: 61 NRVEVDRVFTTHQPDAVMHLAAESHVDRSITGPADFIQTNIVGTYMLLEAARAYWNDLDE 120 Query: 121 DKKDQFRFLQISTDEVYG------SLDKG----LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF +STDEVYG L G F+E Y PSSPYSA KASSD+LV A Sbjct: 121 VRKAAFRFHHVSTDEVYGDLLHPDELTSGAALPFFTETTSYAPSSPYSAAKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+PVL++NCSNNYGP+ EKLIP I + G + LYG G +RDWLYVEDHV Sbjct: 181 WHRTYGLPVLVTNCSNNYGPWQNAEKLIPQTIAHALAGKPIPLYGRGDQIRDWLYVEDHV 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-------------YSH 277 RAL LVL KGR+GE YNIGG+NE++N+++V I LLD L+P S S+ Sbjct: 241 RALLLVLTKGRVGETYNIGGHNEKRNLEVVQTICDLLDELVPLSPSPLEGEKPGERVKSY 300 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 + I + DRPGHDRRYAID+ KI +E+ W PQE+ ESGL KTV WYLD++W Sbjct: 301 RDQITHVADRPGHDRRYAIDAGKIATELKWLPQESFESGLYKTVQWYLDSSW 352 >gi|240138980|ref|YP_002963455.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] gi|240008952|gb|ACS40178.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] Length = 352 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D +TYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+P+A+++ AAESHVDRSI F+ TN+IGT ++L+ R W L + Sbjct: 61 DPARVHALYAEFRPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLDR 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEQALTETVRWYLDNEAWWRPI 335 >gi|163851816|ref|YP_001639859.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens PA1] gi|163853095|ref|YP_001641138.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens PA1] gi|163663421|gb|ABY30788.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens PA1] gi|163664700|gb|ABY32067.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens PA1] Length = 352 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D +TYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+P+A+++ AAESHVDRSI F+ TN+IGT ++L+ R W L + Sbjct: 61 DPARVHALYAEFKPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLDR 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEEALTETVRWYLDNEAWWRPI 335 >gi|218530622|ref|YP_002421438.1| dTDP-glucose 4,6-dehydratase [Methylobacterium chloromethanicum CM4] gi|218531919|ref|YP_002422735.1| dTDP-glucose 4,6-dehydratase [Methylobacterium chloromethanicum CM4] gi|218522925|gb|ACK83510.1| dTDP-glucose 4,6-dehydratase [Methylobacterium chloromethanicum CM4] gi|218524222|gb|ACK84807.1| dTDP-glucose 4,6-dehydratase [Methylobacterium chloromethanicum CM4] Length = 352 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D +TYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + EF+P+A+++ AAESHVDRSI F+ TN+IGT ++L+ R W L + Sbjct: 61 DPARVHALYAEFRPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLDR 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEEALTETVRWYLDNEAWWRPI 335 >gi|9957777|gb|AAG09479.1|AF279630_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/301 (58%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEAGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWKRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY+ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALYI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|289450995|gb|ADC93912.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Canicola] Length = 349 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/351 (53%), Positives = 252/351 (71%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++ND K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNDTKEYQVIVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D L P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVDSICSIMDELHPSGAPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N +WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENEFWWKEILSGQYKEYY-ENQYEK 348 >gi|188583449|ref|YP_001926894.1| dTDP-glucose 4,6-dehydratase [Methylobacterium populi BJ001] gi|179346947|gb|ACB82359.1| dTDP-glucose 4,6-dehydratase [Methylobacterium populi BJ001] Length = 352 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/335 (53%), Positives = 226/335 (67%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F+PDA+++ AAESHVDRSI F+ TN+IGT ++L+ R W L Sbjct: 61 DPARVHALYAAFRPDAVMHLAAESHVDRSITDPGAFVRTNVIGTRVMLDGARTHWESLDG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL ISTDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 AAKAAFRFLHISTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG + R N+ +V + D L P+S H LI F+ DRPGHDRRYAID S Sbjct: 241 GRIGETYLLGGRSVRNNLAVVKALCAAFDRLKPESGPHERLITFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K + E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEREVGWQPTKVFEQALEETVRWYLDNEAWWRPI 335 >gi|221124294|ref|XP_002160785.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Hydra magnipapillata] Length = 390 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGNL +L ++ + F+Q DI Sbjct: 33 MTILVTGGAGFIGSNFVIDWLAGSSETVVNLDKLTYAGNLQNLASLADNPAHVFVQGDIG 92 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I L+++QP A++NFAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 93 DAELITRLLQQYQPRAVLNFAAESHVDRSIHGPGEFIQTNIVGTFHLLESVRAYWGALPA 152 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL K F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 153 EAKAAFRFLHVSTDEVYGSLTKTDPAFAETNRYEPNSPYSASKAASDHLVRAYHHTYGLP 212 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 213 VLTTNCSNNYGPYHFPEKLIPLMIVNAQAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE 272 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G +GE YN+GG NE+ N+DIV + LLD L P++ + E I ++ DRPGHDRRYAI Sbjct: 273 AGVLGETYNVGGWNEKPNLDIVHTVCALLDELKPRADGKPYKEQITYVTDRPGHDRRYAI 332 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ ++GW P E E+G+ KTV WYLDN W Sbjct: 333 DARKIEQQLGWKPSETFETGIRKTVQWYLDNPQW 366 >gi|91778394|ref|YP_553602.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] gi|91782108|ref|YP_557314.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] gi|91686062|gb|ABE29262.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] gi|91691054|gb|ABE34252.1| dTDP-glucose 4,6-dehydratase [Burkholderia xenovorans LB400] Length = 353 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/355 (52%), Positives = 245/355 (69%), Gaps = 14/355 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++++ L++ ++ +DKLTYAGNL +LK L F++ DI Sbjct: 2 ILVTGGAGFIGA---NFVLDWLRLHDEPLVNVDKLTYAGNLGTLKSRQHDPLHIFVRADI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L Sbjct: 59 CDRSALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALG 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+ Sbjct: 119 EAGKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGL 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL Sbjct: 179 PVLTTNCSNNYGPYQFPEKLIPLMIASALAGKALPVYGDGQNVRDWLYVGDHCSAIREVL 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAI 296 +G GE YN+GG NE+KN+++V + LLD L PK+ S+ + I +++DRPGHDRRYAI Sbjct: 239 ARGTPGETYNVGGWNEKKNLEVVHTLCDLLDRLRPKAGASYHDQITYVKDRPGHDRRYAI 298 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 D+ K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 299 DARKLERELGWKPAETFETGLAKTVRWYLDNQAWSNEV-----ASGEYRKWVETN 348 >gi|260220293|emb|CBA27686.1| dTDP-glucose 4,6-dehydratase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 358 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGNL +L ++ + F+Q DI Sbjct: 1 MTILVTGGAGFIGSNFVIDWLAGSSETVVNLDKLTYAGNLQNLASLADNPAHVFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I L+++QP A++NFAAESHVDRSI G EFI TNI+GTF LLE R +W L Sbjct: 61 DAELITRLLQQYQPRAVLNFAAESHVDRSIHGPGEFIQTNIVGTFHLLESVRAYWGALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL K F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLTKTDPAFAETNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLMIVNAQAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G +GE YN+GG NE+ N+DIV + LLD L P++ + E I ++ DRPGHDRRYAI Sbjct: 241 AGVLGETYNVGGWNEKPNLDIVHTVCALLDELKPRADGKPYKEQITYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ ++GW P E E+G+ KTV WYLDN W Sbjct: 301 DARKIEQQLGWKPSETFETGIRKTVQWYLDNPQW 334 >gi|159026485|emb|CAO86457.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 363 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/337 (54%), Positives = 236/337 (70%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + N + +V+V+D LTYAGNL++L + N F FLQ DICD Sbjct: 15 IVITGGAGFIGSNFVHHWCENYPEDRVIVLDALTYAGNLHNLATLKDRNNFRFLQGDICD 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + D + +FAAESHVDRSILG F+ TN++GTF LLE R W LS Sbjct: 75 RALVDQLFAGENIDTVAHFAAESHVDRSILGPGAFVQTNVVGTFTLLESFRQHW--LSNH 132 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+L A+ HTYG+P Sbjct: 133 QPDNYRFLHVSTDEVYGSLGLDDPAFTETTPYAPNSPYSASKAGSDHLARAYFHTYGMPT 192 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYG YHFPEKLIPL ++ G + +YGDGQNVRDWLYV+DH +AL V+ K Sbjct: 193 IITNCSNNYGSYHFPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVQDHCQALDTVIHK 252 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE KNID+V + L+D L P LI F+ DRPGHDRRYAID Sbjct: 253 GKAGETYNIGGNNEVKNIDLVRMLCDLMDELAPDLPVKPAQNLITFVRDRPGHDRRYAID 312 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++KI++E+GW P+E +E GL KT+ WYLD+ WW+PL Sbjct: 313 ATKIRTELGWQPEETVEGGLRKTIQWYLDHRDWWQPL 349 >gi|253999156|ref|YP_003051219.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. SIP3-4] gi|253985835|gb|ACT50692.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. SIP3-4] Length = 358 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 241/332 (72%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + +V+ +DKLTYAGNL +L++++Q F+ DI DR Sbjct: 5 ILVTGGAGFIGANFVLDWLAAGLGRVVNLDKLTYAGNLQNLQDVAQHPDHVFVHGDIGDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AI+NFAAESHVDRSI G ++FI TN++GTF LLEE R +WS L + Sbjct: 65 ALVAKLLAEHKPRAILNFAAESHVDRSIHGPEDFIQTNVVGTFHLLEEARHYWSSLDTSE 124 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L F+E PY P+SPYSA+KA+SD+LV A+ HTYG+P L Sbjct: 125 QGAFRFLHVSTDEVYGTLAAHDPAFTETKPYAPNSPYSASKAASDHLVRAYQHTYGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL + + G + +YGDGQ +RDWLYV+DH A+ VL+ G Sbjct: 185 TTNCSNNYGPYHFPEKLIPLCLLNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ N+D+V + +LD+L P+ S+ E I F++DRPGHDRRYAID+ Sbjct: 245 RVGETYNVGGWNEKANLDVVQLLCDILDSLQPRKDGQSYREQITFVKDRPGHDRRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK+ SE+GW PQE+ E+G+ KTV WYL++ W Sbjct: 305 SKLYSELGWKPQESFETGIRKTVAWYLEHQDW 336 >gi|22298001|ref|NP_681248.1| dTDP-glucose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] gi|22294179|dbj|BAC08010.1| dTDP-glucose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] Length = 359 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/350 (51%), Positives = 244/350 (69%), Gaps = 8/350 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGG GFIG+ R + + VL +DK+TYA + +L + Q + F++ D+ Sbjct: 2 MKFLVTGGGGFIGANFVRLALTEGWGTVLNLDKVTYACHPATLAMLEQLPNYQFVRGDVG 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ L+ FQPDA+++FAAESHVDRSI +FI TN++GT LLEE + +W L Sbjct: 62 DRPLVQDLLQSFQPDAVIHFAAESHVDRSINSPQDFIQTNVVGTANLLEEVKTYWQQLPP 121 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++FRF+ ISTDEVYGSL + F ED PY P+SPY+A+KA+SD+LV A+ HTYG+P Sbjct: 122 GAQERFRFIHISTDEVYGSLGPEDPPFREDTPYAPNSPYAASKAASDHLVRAYHHTYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L +NCSNNYGPY FPEKLIPL I + + G + +YGDGQNVRDWLYVEDH RALY V + Sbjct: 182 TLTTNCSNNYGPYQFPEKLIPLMICQALAGQPLPIYGDGQNVRDWLYVEDHCRALYTVWQ 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 KG++G+ YNIGGN E+ N+++V + LL L+P+ + ++ LI F+ DRPGHDRRYAID Sbjct: 242 KGQVGQTYNIGGNCEKPNLEVVQTLCDLLQTLLPRPHLNYRSLITFVSDRPGHDRRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 ++KI+ E+GW P+E SGL KTV WYL + W E DYS W Sbjct: 302 ATKIQRELGWQPRETFSSGLEKTVQWYLAHQDW-----VEAARTADYSAW 346 >gi|52425648|ref|YP_088785.1| RfbB protein [Mannheimia succiniciproducens MBEL55E] gi|52307700|gb|AAU38200.1| RfbB protein [Mannheimia succiniciproducens MBEL55E] Length = 354 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/338 (56%), Positives = 251/338 (74%), Gaps = 6/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSAL RY++N + +V+ +DKLTYA NL+SL+ +S + +SF + DIC Sbjct: 1 MKILVTGGAGFIGSALIRYIINQRQDEVINLDKLTYAANLDSLETVSLNPRYSFERADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + QPDA+++ AAESHVDRSI GA FI TNI+GT+ LLE R +W+ L Sbjct: 61 DRAALDRIFADHQPDAVMHLAAESHVDRSIDGAGIFIQTNIVGTYTLLEAARHYWNRLDT 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L DK LF+E+ PY+PSSPYSA+KAS+D+LV AW TYG+P Sbjct: 121 ERKKTFRFHHISTDEVYGDLADKNALFTEETPYSPSSPYSASKASADHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP+ FPEKLIPL I +EG + +YG+G +RDWL+VEDHVRALY +L Sbjct: 181 TIVSNCSNNYGPFQFPEKLIPLMILNALEGKPLPVYGNGLQIRDWLFVEDHVRALYKILT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +GR+GE YNIGGNNE+ NI++V + LL+ L+P + +LI ++ DRPGHD RY Sbjct: 241 EGRVGETYNIGGNNEKSNIEVVKTLCTLLEELVPNKPAGVMKYEDLICYVTDRPGHDLRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AIDSSKI E+ W +E+ ESG+ KT+ WYL N WWR Sbjct: 301 AIDSSKINRELDWRAEESFESGMRKTLQWYLTNKSWWR 338 >gi|9957779|gb|AAG09480.1|AF279631_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/301 (58%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY+ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALYI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|269793217|ref|YP_003318121.1| dTDP-glucose 4,6-dehydratase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100852|gb|ACZ19839.1| dTDP-glucose 4,6-dehydratase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 359 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/331 (55%), Positives = 234/331 (70%), Gaps = 4/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG GFIGS L R L V+ +DKLTYAGN +SL + ++F+Q DICD Sbjct: 7 ILITGGCGFIGSNLVR-LALQKGYSVINLDKLTYAGNRSSLAGVEAHKGYTFVQGDICDL 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ L+E +P I++ AAESHVDRSI G +EFI TNI+GT LL T +W L + + Sbjct: 66 ALVQRVLEEHRPSGILHLAAESHVDRSIDGPEEFIQTNIVGTHRLLVATLTFWKSLPEPE 125 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K FRFL +STDEV+GSL +GLF E PY+P SPYSA+KASSD+LV A+GHTYG+PVL+ Sbjct: 126 KASFRFLHVSTDEVFGSLGPEGLFHEFTPYDPRSPYSASKASSDHLVRAYGHTYGLPVLV 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPY FPEKLIPL I I + +YGDG N+RDWLYV+DH AL LV ++G+ Sbjct: 186 TNCSNNYGPYQFPEKLIPLVINSAIRNKPLPVYGDGYNIRDWLYVKDHTEALLLVFERGK 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE Y IGG +E+ NI+IV + LLD L P+S S+ E I F+ DRPGHDRRYAIDSS Sbjct: 246 PGETYAIGGRSEKTNIEIVRTVCALLDELHPRSDGKSYAEQITFVPDRPGHDRRYAIDSS 305 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P+ E GL +TV WYL+N W Sbjct: 306 KIAVELGWTPRTPFEEGLRRTVLWYLENQPW 336 >gi|332286442|ref|YP_004418353.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] gi|330430395|gb|AEC21729.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] Length = 357 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/334 (55%), Positives = 232/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +D+LTYAGNL++L + F+ +I Sbjct: 1 MSILVTGGAGFIGSNFVLDWLRQSDEPVVNLDQLTYAGNLDNLASLKNDARHVFVHGNIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D S L + QP AI+NFAAESHVDRSI G +EFI TNI+GTF LLE TR +W L Sbjct: 61 DATLTNSLLVQHQPRAIINFAAESHVDRSIHGPEEFIQTNIVGTFHLLESTRAYWCKLQG 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KD FRFL +STDEVYGSL D FSE Y P+SPYSA+KA+SD+LV ++ HTYG+P Sbjct: 121 AEKDNFRFLHVSTDEVYGSLGKDDTAFSETHRYQPNSPYSASKAASDHLVRSYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VLK Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIVNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLK 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G GE YN+GG NE+ NIDIV I LLD L P+ + S+ E I ++ DRPGHDRRYAI Sbjct: 241 AGTTGEIYNVGGWNEKPNIDIVNTICTLLDELQPRQDNKSYKEQISYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DARKLEQELGWRPAETFETGIRKTVQWYLDNQEW 334 >gi|107021947|ref|YP_620274.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia AU 1054] gi|116688894|ref|YP_834517.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia HI2424] gi|105892136|gb|ABF75301.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia AU 1054] gi|116646983|gb|ABK07624.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia HI2424] Length = 353 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 241/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F++VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLDGNPKHVFVRVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + L E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L+ Sbjct: 62 DALDALLAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDKARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQVW-----ADEVASGEYRKWVETN 348 >gi|293392091|ref|ZP_06636425.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952625|gb|EFE02744.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 342 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/333 (52%), Positives = 237/333 (71%), Gaps = 6/333 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGSAL R+L+ + ++ +DKLTYAGNL +L + + F Q DIC Sbjct: 1 MQFLITGGAGFIGSALIRWLIQHTEHDIINVDKLTYAGNLRALYSVETHPRYHFEQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L +++PDA+++ AAESHVDRSI F+ TNIIGT+ LLE R ++ L+ Sbjct: 61 DGQMMAHILSQYRPDAVIHLAAESHVDRSIDAPAAFMQTNIIGTYTLLEAARNYYEKLTA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +FRFL ISTDEVYG + + L ED Y PSSPYSA+KAS+D+LV AW TYG+P Sbjct: 121 EKKAEFRFLHISTDEVYGDVVENHALSKEDAAYAPSSPYSASKASADHLVHAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NC+NNYGPY +PEKLIP I+ + G + +YG+GQ +RDWLYVEDH+RALYLVL Sbjct: 181 TIITNCANNYGPYQYPEKLIPFMISNALNGKPLPVYGNGQQIRDWLYVEDHIRALYLVLM 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 KG +GE YNI + E+ N+ ++ I LL+ L+P + +LI + DRPGHDRRY Sbjct: 241 KGNVGESYNISSHCEKTNLAVICAICELLEELVPNKPMGVKYYADLIVHVTDRPGHDRRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 A+D++KI+ E+GW PQEN SG+ KTV WY+DN Sbjct: 301 ALDATKIQQELGWQPQENFFSGIRKTVQWYIDN 333 >gi|170748797|ref|YP_001755057.1| dTDP-glucose 4,6-dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170655319|gb|ACB24374.1| dTDP-glucose 4,6-dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 349 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 173/335 (51%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LVNDL V +D +TYA N SL ++ + ++ DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVNDLGHDVCTLDAMTYAANPVSLAPLADNPRHRLVEADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ A +F+P+A+++ AAESHVDRSI F+ TN+IGT +L+ R + L + Sbjct: 61 DRAAVQKAYADFKPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQTMLDGARGHYETLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 AEKRTFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH + L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKKLPVYGDGLNERDWIHVEDHAKGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GRIGE Y +GG R N+ +V + D L P+ H +LI F+ DRPGHDRRYAID + Sbjct: 241 GRIGETYLLGGRAVRNNLAVVKALCAAFDRLRPQGAPHEQLISFVADRPGHDRRYAIDCT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW PQ+ E L +TV WYL N WWRP+ Sbjct: 301 KAETELGWRPQKTFEQALEETVAWYLGNEGWWRPI 335 >gi|158333604|ref|YP_001514776.1| dTDP-glucose 4,6-dehydratase [Acaryochloris marina MBIC11017] gi|158303845|gb|ABW25462.1| dTDP-glucose 4,6-dehydratase, putative [Acaryochloris marina MBIC11017] Length = 355 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 188/335 (56%), Positives = 241/335 (71%), Gaps = 6/335 (1%) Query: 1 MRLIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ + R ND + VL +DKLTYAG+L++L + F+Q DI Sbjct: 1 MTILVTGGAGFIGANYVLRKRQNDEGL-VLNLDKLTYAGHLSTLDSLKSDPDHIFIQGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + L +++P AI+NFAAE+HVDRSI G D FI TNI+GTF LLE R +W LS Sbjct: 60 GDRQLVEDLLTQYRPRAILNFAAETHVDRSIDGPDAFIQTNIVGTFNLLETVRSYWQNLS 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ FRFL +STDEV+G+L FSE Y P+SPYSA+KASSD+LV ++ HTY + Sbjct: 120 VAERNSFRFLHVSTDEVFGTLSAVDPPFSESTAYAPNSPYSASKASSDHLVRSYFHTYNL 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++NCSNNYGPY FPEKLIPL I IEG + +YGDGQN+RDWL+VEDH RA+ LVL Sbjct: 180 PTLITNCSNNYGPYQFPEKLIPLMILNAIEGKPLPVYGDGQNIRDWLFVEDHCRAIDLVL 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYA 295 +G +GE YNIGGN E+ N+ +V +I +LD L+P S H LI F++DRPGHDRRYA Sbjct: 240 TQGEMGETYNIGGNAEKTNLWLVQQICAILDDLLPHSAHRPHANLITFVQDRPGHDRRYA 299 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I+ SKIK +GW PQ +ESGL KTV WYLD+ W Sbjct: 300 INFSKIKQHLGWSPQVTIESGLRKTVQWYLDHQAW 334 >gi|241763176|ref|ZP_04761235.1| dTDP-glucose 4,6-dehydratase [Acidovorax delafieldii 2AN] gi|241367675|gb|EER61941.1| dTDP-glucose 4,6-dehydratase [Acidovorax delafieldii 2AN] Length = 360 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/334 (54%), Positives = 236/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ + V+ +DKLTYAGNL++L+ + F+Q DI Sbjct: 1 MTILVTGGAGFIGANFVLDWLATCDEPVVNLDKLTYAGNLHNLESLQGDARHIFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ L E +P AIVNFAAESHVDRSI G ++FI TN++GTF LLE R +W L Sbjct: 61 DSALVQRLLAEHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAARHYWQALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK+ FRFL +STDEVYG+L F+ED Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 IKKEAFRFLHVSTDEVYGTLSATDPAFTEDNTYEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G ++ +YGDG +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKNLPVYGDGMQIRDWLYVKDHCSAIRRVLQ 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ NIDIV + LLD L P+S S+ I +++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKPNIDIVNTVCALLDELRPRSDGQSYRAQITYVQDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ E+GW P E +SG+ KTV WYLD+ W Sbjct: 301 DARKIERELGWKPAETFDSGIRKTVQWYLDHPEW 334 >gi|9957811|gb|AAG09496.1|AF279647_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/301 (58%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNIVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY+ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALYI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|218245362|ref|YP_002370733.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8801] gi|218165840|gb|ACK64577.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8801] Length = 355 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +L++TGGAGFIGS + + +++V+D LTYAGN +L + F F+Q +IC Sbjct: 5 KLLITGGAGFIGSNFVHHWYHQYPYHRIIVLDALTYAGNRRNLASLEGKENFRFVQGNIC 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I + L+E D + +FAAESHVDRSILG D FI TN+IGTF LLE R +W+ Q Sbjct: 65 DRPLIDNLLREENIDIVAHFAAESHVDRSILGPDAFIQTNVIGTFTLLESFRHYWN--EQ 122 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ + +RFL +STDEVYGSL+ F+E PY P+SPYSA+KA SD+L A+ HTY +P Sbjct: 123 NQPENYRFLHVSTDEVYGSLNPEDPAFTETTPYAPNSPYSASKAGSDHLARAYYHTYNVP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQNVRDWLYV DH AL V++ Sbjct: 183 TIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVGDHCSALQTVIQ 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 KG GE YNIGGNNE KN+D+V + L+D L P +LI F++DRPGHDRRYAI Sbjct: 243 KGNPGETYNIGGNNEVKNLDLVTLLCDLMDELAPNLPVKPSKQLITFVKDRPGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D++KIK+E+GW PQE +E GL KT+ WYL++ WW+PL + Sbjct: 303 DATKIKTELGWTPQETVEGGLRKTIEWYLNHQDWWQPLLSQ 343 >gi|159046644|ref|YP_001542313.1| dTDP-glucose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] gi|157914403|gb|ABV95832.1| dTDP-glucose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] Length = 346 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 234/335 (69%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R + D QV+ +D LTYA L+++ ++ S ++F VDI Sbjct: 1 MKLLVTGGAGFIGSAVVRQAIRDGH-QVVNLDALTYAACLDNVASVADSPAYAFEHVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + PDA+++ AAESHVDRSI G +FI TNI GT+ +LE R W + Q Sbjct: 60 DRAALDRVFATHAPDAVMHLAAESHVDRSIDGPGDFIETNITGTYNMLEAARSHW--VGQ 117 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEV+GSL G F+E+ PY+P SPYSA+KA+SD+LV AW TYG+PV Sbjct: 118 GRPEDFRFHHISTDEVFGSLGPTGQFTEETPYDPRSPYSASKAASDHLVRAWHETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+HFPEKL+P+ I + + G + +YGDG NVRDWLYVEDH AL LV++K Sbjct: 178 VMTNCSNNYGPFHFPEKLVPVIILKALAGEPLPIYGDGSNVRDWLYVEDHADALLLVVQK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG NER N+ +V + +LD L P + E I F+ DRPGHD RYAID + Sbjct: 238 GVVGRSYNIGGENERTNLQLVQTLCGILDELRPGPRPYAEQISFVTDRPGHDARYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I +E+GW P +E GL +TV WYLDN WWR L Sbjct: 298 RIATELGWRPSVTVEEGLRRTVQWYLDNEAWWRAL 332 >gi|186477070|ref|YP_001858540.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] gi|184193529|gb|ACC71494.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] Length = 353 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLEWLNTSDESVLNLDKLTYAGNLGTLKSQQDNPRHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 62 ETLDKLFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNTLNAAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAAKPLPVYGDGQNVRDWLYVGDHCSAIREVLSRG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ E I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDQKRPKAQGSYREQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWLPAETFETGLAKTVQWYLDNQEWVDEV-----ASGEYRKWVETN 348 >gi|118595027|ref|ZP_01552374.1| dTDP-glucose 4,6-dehydratase [Methylophilales bacterium HTCC2181] gi|118440805|gb|EAV47432.1| dTDP-glucose 4,6-dehydratase [Methylophilales bacterium HTCC2181] Length = 352 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 237/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIGS + + +V+ +DKLTYAGNL +LK + + + F Q DI Sbjct: 1 MTIVVTGAAGFIGSNFVLNWLTHSEEKVIALDKLTYAGNLENLKSVEANANYEFAQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + QP I+NFAAESHVDRSI G D+F+ TNI+GT+ LLEE R +++ LS+ Sbjct: 61 DSRLVAKLLHQHQPRVIINFAAESHVDRSIHGPDDFMQTNILGTYRLLEEARSFFNTLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + QFRFL +STDEVYG+L F E+ Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 VGQKQFRFLHVSTDEVYGTLSTNDRAFKEEKRYEPNSPYSASKAASDHLVRAWNHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL + + G + +YGDGQ +RDWLYV DH + + VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLCVLNALNGKDLPIYGDGQQIRDWLYVVDHCKGITTVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 KG IGE YNIGG NE+ N+++V + LLD L P+ S+ E I F++DRPGHD+RYAI Sbjct: 241 KGVIGETYNIGGWNEKTNLEVVNTLCDLLDELKPREDGKSYREQITFVKDRPGHDQRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D++KI E+GW P+E E+G+ KTV WYLD+ W Sbjct: 301 DATKISKELGWKPEETFETGIRKTVQWYLDHQDW 334 >gi|32456000|ref|NP_862002.1| rb127 [Ruegeria sp. PR1b] gi|22726352|gb|AAN05148.1| RB127 [Ruegeria sp. PR1b] Length = 350 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/339 (54%), Positives = 236/339 (69%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V +V+ +D LTYA L ++ E++QSNL+SF Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRQAVK-AGHEVVNLDALTYAACLENVAEVAQSNLYSFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + PD +++ AAESHVDRSI G +F+ TNI GTF +LE R +W+ + Sbjct: 60 DRAALDKIFALHAPDVVMHLAAESHVDRSIDGPSDFVETNITGTFNMLEAARKFWAAVG- 118 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K FRF ISTDEVYGSL DK +F+E+ Y+P SPYSA+KASSD+LV AW TYG+ Sbjct: 119 -KPGHFRFHHISTDEVYGSLPADKSVMFTEETAYDPRSPYSASKASSDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGPYHFPEKLIP+ I + G + +YGDG N+RDWLYVEDH AL V+ Sbjct: 178 PVVLTNCSNNYGPYHFPEKLIPVIILNALAGKALPIYGDGSNIRDWLYVEDHADALLTVV 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 +KG G YNIGG NER N+++V + +LD P+S S+ E I F+ DRPGHD RYA Sbjct: 238 QKGENGRSYNIGGENERSNLELVQTLCEILDQKKPRSDGKSYAEQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I+ E+GW P +E GL +TV WYLDN WWR L Sbjct: 298 IDPSRIRDELGWRPSVTVEEGLARTVQWYLDNETWWRAL 336 >gi|85707417|ref|ZP_01038498.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. 217] gi|85668073|gb|EAQ22953.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. 217] Length = 349 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/339 (54%), Positives = 238/339 (70%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAGFIGSA+ R+ V +V+ +D LTYA L+++ ++QS +SF+ DI Sbjct: 1 MRLLVTGGAGFIGSAVVRHAVAR-GYEVVNLDALTYAACLDNVASVAQSPRYSFVHADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E P+A+++ AAESHVDRSI G F+ TNI GT+ LLE R W L Sbjct: 60 DRAALDRVFAEHAPEAVLHLAAESHVDRSIDGPGAFVETNITGTYNLLEAARGHWQALG- 118 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K D FRF ISTDEVYGSL D + F+E+ PY+P SPYSA+KA+SD+LV AW TYG+ Sbjct: 119 -KPDSFRFQHISTDEVYGSLPADPSVKFTENTPYDPRSPYSASKAASDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL++NCSNNYGP+HFPEKLIP+ I + + G + +YGDG++VRDWLYVEDH AL VL Sbjct: 178 PVLITNCSNNYGPFHFPEKLIPVIILKALAGKPLPIYGDGRHVRDWLYVEDHAEALLKVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 ++G G YNIGG NER N+D+V + +LDAL +S S+ E I F+ DRPGHD RYA Sbjct: 238 EQGVPGRSYNIGGENERSNLDLVRTLCTILDALCTRSDGASYAEQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I+ E+GW P +E GL +TV WYL+N WWR L Sbjct: 298 IDPSRIRDELGWRPSVTVEEGLRRTVAWYLENESWWRAL 336 >gi|167837613|ref|ZP_02464496.1| dTDP-glucose 4,6-dehydratase [Burkholderia thailandensis MSMB43] Length = 353 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/352 (53%), Positives = 235/352 (66%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +LK + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + L + +P AI++ AAESHVDRSI G +F+ TN++GTF LLE R +WS L D Sbjct: 62 AVIDALLAQHKPRAILHLAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALDADA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALGGKQLPVYGDGQNVRDWLYVGDHCGAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+ W P E E+GL KTV WYLD+ W + DY KW N Sbjct: 302 KLERELAWKPAETFETGLRKTVRWYLDSQEWVDEVVS-----GDYRKWVETN 348 >gi|240140507|ref|YP_002964987.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] gi|240010484|gb|ACS41710.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] Length = 352 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 230/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D LTYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +F+P+A+++ AAESHVDRSI F+ TN+IGT ++L+ R W LS Sbjct: 61 DPARVHALYVDFRPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWERLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL + F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKATFRFLHVSTDEVYGSLPPEAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG R N+ +V + D L P+S H LI F+ DRPGHDRRYAID S Sbjct: 241 GRLGETYLLGGRAVRNNLAVVNALCAAFDRLRPESGPHERLISFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEQALEETVRWYLDNEAWWRPI 335 >gi|302343715|ref|YP_003808244.1| dTDP-glucose 4,6-dehydratase [Desulfarculus baarsii DSM 2075] gi|301640328|gb|ADK85650.1| dTDP-glucose 4,6-dehydratase [Desulfarculus baarsii DSM 2075] Length = 350 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 236/337 (70%), Gaps = 3/337 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IVTGGAGFIGSAL LV+ + +V+ +DKLTYA N SL +++ F F + DIC Sbjct: 1 MSIIVTGGAGFIGSALVSLLVDQGEEKVVCLDKLTYAANPASLDQVADKPNFVFERADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +P AI++ AAESHVDRSI +FI TNI+GT+ LL + ++ L Sbjct: 61 AADEVARIFTQHKPTAIMHLAAESHVDRSIDAPGQFIQTNIVGTYTLLTQALAYFETLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++++FRFL +STDEVYGSL + GLF+EDM Y P+SPY+A+KASSD L AW T+G+P Sbjct: 121 AERERFRFLHVSTDEVYGSLGESGLFTEDMAYRPNSPYAASKASSDLLARAWRETFGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP FPEKLIPL I + + G + +YG GQNVRDWL+VEDH AL LVL+ Sbjct: 181 LITNCSNNYGPRQFPEKLIPLMIIKGLAGQPMPVYGSGQNVRDWLHVEDHAEALALVLRN 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 GR G+ YNIGG++ER NI++V I LD +P S H LI+ + DRPGHD RYA+D Sbjct: 241 GRPGQTYNIGGDSERANIEVVRAICAELDRALPDSPHRPHASLIQSVADRPGHDLRYAMD 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SK+ E+GW P+ E GL +TV WYLDN+ WWRP+ Sbjct: 301 FSKLNRELGWRPRRTFEQGLAQTVRWYLDNSQWWRPI 337 >gi|319426938|gb|ADV55012.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] gi|319426992|gb|ADV55066.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] Length = 337 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 238/332 (71%), Gaps = 9/332 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGSAL R L+ + VL DKLTYA + SL ++ S + F+Q DIC Sbjct: 1 MRILITGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADSERYHFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L++FQPD +++ AAESHVDRSI G EFI TNI+GT+ LLE R ++ L Q Sbjct: 61 DRARLDQVLQQFQPDLVMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ +FR ISTDEVYGSL K GLFSE Y+PSSPYSA+KAS+D+LV AW TYG+P+ Sbjct: 121 AQQRRFRLHHISTDEVYGSLGKAGLFSETSAYDPSSPYSASKASADHLVRAWHRTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL + + G + +YG+GQ VRDWLYV+DHV+AL+LV + Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVNNALLGKPLPVYGNGQQVRDWLYVDDHVKALFLVATE 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--------KSYSHTELIRFIEDRPGHD 291 G++GE YNIGG+NE N+ +V I LL+ L+P +LI+ + DRPGHD Sbjct: 241 GQLGETYNIGGSNEYTNLAVVQRICDLLEELVPTHPQSLTMSGMGFRDLIQHVADRPGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 RYAID+SKI+ E+GW P E+ +SGL KTV W Sbjct: 301 VRYAIDASKIQRELGWQPLESFDSGLRKTVEW 332 >gi|170732195|ref|YP_001764142.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia MC0-3] gi|169815437|gb|ACA90020.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia MC0-3] Length = 353 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLDGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + L E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L+ Sbjct: 62 DALDALLAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDKARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQVW-----ADEVASGEYRKWVETN 348 >gi|212634441|ref|YP_002310966.1| DTDP-glucose 4,6-dehydratase [Shewanella piezotolerans WP3] gi|212555925|gb|ACJ28379.1| DTDP-glucose 4,6-dehydratase [Shewanella piezotolerans WP3] Length = 351 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/337 (54%), Positives = 238/337 (70%), Gaps = 12/337 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSAL R +V + + V+ +DKLTYA + SL + + F++ DIC Sbjct: 1 MVVLITGGAGFIGSALIRLIVEETRDDVVNVDKLTYASSPKSLIHLENEERYHFVEGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L +++PDAI++ AAESHVDRSI G+ EFI TNI+GTF LLE R ++S L Sbjct: 61 NSKLMLDTLNKYRPDAIMHLAAESHVDRSISGSAEFIQTNIVGTFTLLEACRDYYSQLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DKK FRF ISTDEVYG L G FSE PY PSSPYSA+KA++D+LV AW TYG+PV Sbjct: 121 DKKRHFRFHHISTDEVYGDLPLAGQFSETSPYAPSSPYSASKAAADHLVRAWHRTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +LSNCSNNYGPY EKLIPL IT + G + +YG G VRDWLYVEDHVRALYLV+ Sbjct: 181 VLSNCSNNYGPYQHSEKLIPLTITNALAGKPIPIYGLGTQVRDWLYVEDHVRALYLVMTA 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH-----------TELIRFIEDRP 288 G +GE YN+GGN+E++NID+V I +L+ L+P++ S LI F+ DRP Sbjct: 241 GNLGETYNVGGNSEKENIDVVKVICDILEELVPENPSSKLGGNNQVNGFASLISFVADRP 300 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 GHD RYAID+SKI+ ++GW +E ESG+ KTV WY+ Sbjct: 301 GHDLRYAIDASKIEKQLGWAAKETFESGIRKTVEWYV 337 >gi|312962412|ref|ZP_07776903.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] gi|311283339|gb|EFQ61929.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] Length = 356 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 234/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ V V+ +DKLTYAGNL +L + + F+Q DI Sbjct: 1 MTILVTGGAGFIGANFVLDWVAQADEPVINLDKLTYAGNLENLSSLEGNKRHIFVQGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ L E QP AI+NFAAESHVDRSI G ++FI TN++GTF LLE R +W L Sbjct: 61 DTQLVQRLLAEHQPRAILNFAAESHVDRSIHGPEDFIETNVVGTFRLLEAVRAYWKALDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + FRFL +STDEVYGSL D F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 DAQQAFRFLHVSTDEVYGSLAKDDPAFTETHQYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G +GE YN+GG NE+ N+DIV + LLD L P++ +++ I ++ DRPGHDRRYAI Sbjct: 241 AGTVGEVYNVGGWNEKPNLDIVHTVCALLDELRPQADGKPYSDQIAYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DARKLERELGWKPAETFETGIRKTVEWYLDNQDW 334 >gi|289451238|gb|ADC94152.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Hebdomadis] Length = 349 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/351 (53%), Positives = 251/351 (71%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++ND K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNDTKEYQVIVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D L P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVDSICSIMDELHPSGAPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENESWWKEILSGQYKEYY-ENQYEK 348 >gi|9957791|gb|AAG09486.1|AF279637_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEGARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEAENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|45657972|ref|YP_002058.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|5814320|gb|AAD52188.1|AF144879_27 unknown [Leptospira interrogans] gi|1666507|gb|AAB47842.1| RmlB [Leptospira interrogans] gi|45601213|gb|AAS70695.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|289451079|gb|ADC93995.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Autumnalis] Length = 349 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/351 (53%), Positives = 251/351 (71%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++ND K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNDTKEYQVVVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D L P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVDSICSIMDELHPSGAPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENESWWKEILSGQYKEYY-ENQYEK 348 >gi|121592967|ref|YP_984863.1| dTDP-glucose 4,6-dehydratase [Acidovorax sp. JS42] gi|120605047|gb|ABM40787.1| dTDP-glucose 4,6-dehydratase [Acidovorax sp. JS42] Length = 353 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/332 (54%), Positives = 233/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL++L + F+Q DI DR Sbjct: 2 ILVTGGAGFIGANFVLDWLAVGDEPVVNLDKLTYAGNLHNLDSLQGDARHVFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E QP A++NFAAESHVDRSI G ++FI TN++GTF LLE R +W L + Sbjct: 62 TLLDRLLAEHQPRAVINFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAARHYWQALPATQ 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L D F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGTLAPDAPAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKSLPVYGDGMQIRDWLYVKDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ NIDIV + LLD L P+S S+T I ++ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEKPNIDIVNTVCALLDELRPRSDGQSYTTQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLDNPQW 333 >gi|294827924|ref|NP_711842.2| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] gi|293385769|gb|AAN48860.2| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] Length = 349 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/351 (53%), Positives = 251/351 (71%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++ND K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNDTKEYQVVVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D L P H++LI++++DRPGHD RYAID S Sbjct: 239 GLSGETYNIGTRNEKKNIDIVDSICSIMDELHPSGAPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENESWWKEILSGQYKEYY-ENQYEK 348 >gi|187734722|ref|YP_001876834.1| dTDP-glucose 4,6-dehydratase [Akkermansia muciniphila ATCC BAA-835] gi|187424774|gb|ACD04053.1| dTDP-glucose 4,6-dehydratase [Akkermansia muciniphila ATCC BAA-835] Length = 350 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/335 (54%), Positives = 240/335 (71%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAGFIGS L R L+ + +VL ID LTYAGN++SL + S + FL D+ Sbjct: 1 MKVIVTGGAGFIGSNLVRLLL-ERGHEVLNIDALTYAGNIHSLDGSADSPAYRFLHADVR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L+E+ PD +++ AAESHVDRSI F+TTN++GTF +L+ ++ L Sbjct: 60 DASLMRRTLREYAPDWVMHLAAESHVDRSIDDPGNFMTTNVMGTFSMLQAALEYYRSLEG 119 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +KK++FRF ISTDEVYGSL K GLF+E PY P SPYSA+KASSD+LV AW TYG+PV Sbjct: 120 EKKERFRFHHISTDEVYGSLGKEGLFTESTPYRPHSPYSASKASSDHLVRAWHDTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIP+ I + + G + +YG G+NVRDWLYV DH AL V+ Sbjct: 180 LITNCSNNYGPYQFPEKLIPVVILKALGGEPIPVYGKGENVRDWLYVGDHCEALLTVVSC 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE+ N+++V + LD L P+ S+ E I F++DRPGHD RYAID Sbjct: 240 GKPGETYNIGGNNEKTNLELVELLCSHLDELRPRPDGRSYREQISFVQDRPGHDLRYAID 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +SKI+ E+GW P+++ SG KT+ WYLD+ WWR Sbjct: 300 ASKIRRELGWTPRQDHSSGFRKTIQWYLDHEEWWR 334 >gi|9957797|gb|AAG09489.1|AF279640_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|9957807|gb|AAG09494.1|AF279645_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|163743493|ref|ZP_02150871.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10] gi|161383196|gb|EDQ07587.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10] Length = 350 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/339 (53%), Positives = 238/339 (70%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V QV+ +D LTYA L+++ +++ S ++F QVDI Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGH-QVVNLDALTYAACLDNVADVADSPNYAFEQVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PD +++ AAESHVDRSI G +FI TNI GT+ +LE R +W+ Sbjct: 60 DRAALDTVFARHRPDVVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARKYWA--EA 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + FRF ISTDEVYGSL +F+E+ Y+P SPYSA+KA+SD+LV AWG TYG+ Sbjct: 118 GRPEAFRFHHISTDEVYGSLSADPSVMFTEETGYDPRSPYSASKAASDHLVRAWGETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGPYHFPEKLIP+ I + G + +YGDG NVRDWLYVEDH AL LV+ Sbjct: 178 PVVLTNCSNNYGPYHFPEKLIPVVILNALAGKPLPIYGDGSNVRDWLYVEDHADALLLVV 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 KGR+G YNIGG NER N+++V + +LD P+ S+ + I F+ DRPGHD RYA Sbjct: 238 SKGRVGRSYNIGGENERSNLELVETLCAILDEKQPREDGGSYKDQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I++E+GW P +E GL KTV WYLDN WWR L Sbjct: 298 IDPSRIRAELGWRPSVTVEEGLEKTVQWYLDNESWWRAL 336 >gi|113867833|ref|YP_726322.1| dTDP-D-glucose 4,6-dehydratase [Ralstonia eutropha H16] gi|113526609|emb|CAJ92954.1| dTDP-D-glucose 4,6-dehydratase [Ralstonia eutropha H16] Length = 351 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/349 (53%), Positives = 235/349 (67%), Gaps = 9/349 (2%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ +L D ++ +DKLTYAGN N+L + + F Q DICD Sbjct: 1 MLVTGGAGFIGANFVLNWLSQDGTDGIINVDKLTYAGNRNTLASLGGNARHIFSQTDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + QP A+V+FAAESHVDRSI EFI TNI+GTF LLE R +W L Sbjct: 61 RAALDKLFAAHQPRAVVHFAAESHVDRSIHDPAEFIQTNIVGTFNLLEAARTYWGGLDAA 120 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEV+GSL G FSE Y P+SPYSA+KA+SD+LV A+ HTYG+PV Sbjct: 121 AKAAFRFLHVSTDEVFGSLGPGDPQFSETTAYRPNSPYSASKAASDHLVRAYHHTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L ++CSNNYGPYHFPEKLIPL +T + G + +YGDG NVRDWLYV DH A+ VL + Sbjct: 181 LTTHCSNNYGPYHFPEKLIPLMMTNALAGRSLPIYGDGLNVRDWLYVGDHCAAICAVLAR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG NE+ N+D+V + LLD L K+ S+ + I F++DRPGHDRRYAID+ Sbjct: 241 GRVGETYNVGGWNEKTNLDVVHTLCDLLDELRRKAIGSYRDQITFVKDRPGHDRRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 K++ E+GW P E +E+GL KTV WYLDN W R DY W Sbjct: 301 HKLERELGWKPAETLETGLRKTVQWYLDNQAWVRN-----ATSGDYRNW 344 >gi|282898608|ref|ZP_06306596.1| dTDP-glucose 4-6-dehydratase [Cylindrospermopsis raciborskii CS-505] gi|281196476|gb|EFA71385.1| dTDP-glucose 4-6-dehydratase [Cylindrospermopsis raciborskii CS-505] Length = 373 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/335 (55%), Positives = 239/335 (71%), Gaps = 7/335 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQVD 58 L+VTGGAGFIGS + ++ +DKLTYA NL +L EI ++ + F+Q D Sbjct: 12 LLVTGGAGFIGSNFVLHARRLGYGNIINLDKLTYASNLQNLTEIERNEKYQEGYRFIQGD 71 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E + L+E++ DA++NFAAE+HVDRSI FI TN++GTF LLE ++ +W L Sbjct: 72 IGNSELVSYLLEEYEVDAVINFAAETHVDRSIFSPGNFIETNVVGTFKLLEASKTYWQKL 131 Query: 119 SQDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S K++ FRFL ISTDEVYGSL+ F ED Y P+SPY+A+KAS+D+LV ++ HTYG Sbjct: 132 SSKKQESFRFLHISTDEVYGSLNAEDTAFREDSQYAPNSPYAASKASADHLVRSYHHTYG 191 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P L +NCSNNYGP FPEKLIPL I I G + +YGDGQN+RDWLYV DH A+YLV Sbjct: 192 LPTLTTNCSNNYGPLQFPEKLIPLMIINAINGKPLPIYGDGQNIRDWLYVTDHCDAIYLV 251 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYA 295 L++GRIGE YNIGG NE+ N+ +V +I +L+ L PK + ++ LI FI+DRPGHDRRYA Sbjct: 252 LQEGRIGENYNIGGMNEKTNLVVVNKICEILERLAPKPNCEYSSLITFIKDRPGHDRRYA 311 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID SKI E+GW P+EN ESGL KTV WYLDN W Sbjct: 312 IDCSKIAKELGWQPKENFESGLIKTVRWYLDNAAW 346 >gi|254561588|ref|YP_003068683.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] gi|254268866|emb|CAX24827.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] Length = 352 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 229/335 (68%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSAL +LV DL +VL +D +TYA N SL+ ++ Q DIC Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDAMTYAANPISLQPLADDPRHRLEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +F+P A+++ AAESHVDRSI F+ TN+IGT ++L+ R W LS Sbjct: 61 DPARVHALYADFKPQAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWERLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL F+E+ Y+P SPYSA+KA+SD+L AW TYG+PV Sbjct: 121 EAKATFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP HFPEKLIPL I +EG + +YGDG N RDW++VEDH R L VL++ Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y +GG + R N+ +V + D L P++ H LI F+ DRPGHDRRYAID S Sbjct: 241 GRLGETYLLGGRSVRNNLAVVKALCAAFDQLKPENGPHERLISFVADRPGHDRRYAIDPS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K ++E+GW P + E L +TV WYLDN WWRP+ Sbjct: 301 KAEAEVGWRPTKVFEEALTETVRWYLDNEAWWRPI 335 >gi|115350805|ref|YP_772644.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] gi|115280793|gb|ABI86310.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] Length = 353 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/332 (55%), Positives = 236/332 (71%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ +L +D++ VL +DKLTYAGNL +L+ +S + F +VDICD Sbjct: 2 ILVTGGAGFIGANFVLDWLRHDVE-PVLNVDKLTYAGNLRTLQSLSGNPKHVFARVDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + E +P A+ +FAAESHVDRSI G +F+ TN++GTF LLE R +WS L+ Sbjct: 61 RAALDALFAEHKPRAVAHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWSGLNDA 120 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P Sbjct: 121 DKAGFRFLHVSTDEVFGSLSPTDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL + Sbjct: 181 LTTNCSNNYGPYQFPEKLIPLMIANALAGKPLPIYGDGQNVRDWLYVGDHCSAIREVLAR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 G GE YN+GG NE+KN+D+V + LLD+ PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 241 GVPGETYNVGGWNEKKNLDVVHTLCDLLDSASPKAAGSYRDQITYVTDRPGHDRRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+GL KTV WYLDN W Sbjct: 301 RKLERELGWKPAETFETGLAKTVRWYLDNQAW 332 >gi|255264193|ref|ZP_05343535.1| dTDP-glucose 4,6-dehydratase [Thalassiobium sp. R2A62] gi|255106528|gb|EET49202.1| dTDP-glucose 4,6-dehydratase [Thalassiobium sp. R2A62] Length = 347 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 237/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R L +V+ +D LTYA L+++ +++ ++F+Q DI Sbjct: 1 MKILVTGGAGFIGSAVVR-LAMARGHEVVNLDALTYAACLDNVASVAKMPGYAFVQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + QPD +++ AAESHVDRSI G FI TN++GT+ +L+ TR +W S+ Sbjct: 60 DYAQLEGVFNTHQPDVVMHLAAESHVDRSIDGPGAFIETNVMGTYNMLQATRAYWQ--SK 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D+ + FRF ISTDEV+GSL + G+F+ED PY+P SPYSA+KASSD+LV AW TYG+PV Sbjct: 118 DRPENFRFHHISTDEVFGSLGETGMFTEDTPYDPRSPYSASKASSDHLVRAWHETYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKL+P+ I + G + +YG G NVRDWLYVEDH AL LVL++ Sbjct: 178 VLTNCSNNYGPFHFPEKLVPVVILNALAGKRIPVYGQGLNVRDWLYVEDHADALLLVLER 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G YNIGG NE +NID+V I LD L P + +LI ++ DRPGHD RYAID Sbjct: 238 GALGRSYNIGGENEARNIDLVTTICATLDRLRPAEAPYGDLITYVTDRPGHDMRYAIDPR 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P +E GL KTV WYL+N WWR L Sbjct: 298 RIRNELGWRPSVTLEEGLEKTVLWYLENEDWWRAL 332 >gi|1944159|dbj|BAA19633.1| dTDP-D-glucose-4,6-dehydratase [Aggregatibacter actinomycetemcomitans] Length = 355 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 189/335 (56%), Positives = 247/335 (73%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ + + + F QVDICD Sbjct: 5 ILVTGGAGFIGSAVVRYIIENTQDSVVNVDKLTYAGNLESLEAVKNNPRYIFEQVDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ QPDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L +K Sbjct: 65 KALARIFEQHQPDAVMHLAAESHVDRSIDGPATFIETNIVGTYILLEAARAYWSSLIDEK 124 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF ISTDEVYG LD LF+E PY+PSSPYSA+KASSD+LV AW TY +P + Sbjct: 125 KAGFRFHHISTDEVYGDLDGTNNLFTETTPYSPSSPYSASKASSDHLVRAWLRTYSLPTI 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP FPEKLIPL I ++G + +YG+GQ +RDWL+VEDH RALY V+ +G Sbjct: 185 VTNCSNNYGPKVFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFVEDHARALYKVVTEG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAI 296 +IGE YNIGG+NE+ NID+V I LL+ L+P + + +LI +++DRPGHD RYAI Sbjct: 245 KIGETYNIGGHNEKANIDVVRTICALLEELVPDKPAGVTKYEDLITYVKDRPGHDVRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D++KI E+GW PQE ESG+ KTV WYL+N WW Sbjct: 305 DATKISRELGWKPQETFESGIRKTVEWYLNNRKWW 339 >gi|9957795|gb|AAG09488.1|AF279639_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGG+GFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGSGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|197106764|ref|YP_002132141.1| dTDP-glucose 4,6-dehydratase [Phenylobacterium zucineum HLK1] gi|196480184|gb|ACG79712.1| dTDP-glucose 4,6-dehydratase [Phenylobacterium zucineum HLK1] Length = 354 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/331 (50%), Positives = 238/331 (71%), Gaps = 2/331 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R V + +V+ +D L Y+ NL +++ ++ ++F Q DIC Sbjct: 1 MKILITGGAGFIGSAVVRRAVREGH-EVVNLDVLAYSANLENVESVASHPAYAFEQADIC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + + QPDA+++ AAESHVDRS+ G +F+ N++GT ++LE R +WS L Sbjct: 60 DKARVEAIFAQHQPDAVMHLAAESHVDRSVEGPLDFVRANVMGTAVMLEAARAYWSRLEG 119 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +KD FRF +STDEV+G+L + G F+E+ PY+P+SPYSA+KAS+D+LV AWG TYG+PV Sbjct: 120 ARKDAFRFHHVSTDEVFGALGEDGEFTEETPYDPTSPYSASKASADHLVRAWGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIP ITR +EG + +YGDG+ VRDWL+V+DH AL L L K Sbjct: 180 VITNCSNNYGPYQFPEKLIPTVITRALEGKSIPVYGDGRQVRDWLHVDDHAEALLLALTK 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE Y IGG+ + +NID+V I LD + P + H + I F+ DRP HD RYAID+S Sbjct: 240 GELGETYCIGGDADHRNIDVVRMICAELDKVAPANTPHADKIAFVTDRPAHDFRYAIDAS 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P ++ GL +TV WY+DN W Sbjct: 300 KIERELGWKPSIALDRGLAETVRWYVDNYGW 330 >gi|289522627|ref|ZP_06439481.1| dTDP-glucose 4,6-dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504463|gb|EFD25627.1| dTDP-glucose 4,6-dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 351 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/335 (55%), Positives = 240/335 (71%), Gaps = 12/335 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS R V + +DKLTYA NL +LK+IS + + F+Q DI Sbjct: 1 MKILVTGGAGFIGSNFLRTYVPKYPNHSFINLDKLTYAANLYNLKDISDAKNYFFVQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E +++ F+PD +V+FAAESHVDRSILG EFI TNI+GTF LLE R +W Sbjct: 61 ADFESVKAVFDRFEPDIVVHFAAESHVDRSILGPAEFIKTNIVGTFNLLEACRFYW---- 116 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +DK+D+ F +STDEVYGSL D G F+E+ Y+PSSPYSA+KASSD+LV A+ TYG+P Sbjct: 117 KDKEDKL-FHHVSTDEVYGSLGDTGYFTEESRYDPSSPYSASKASSDHLVRAYHRTYGLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NC+NNYGPY FPEKLIPL I +EG + +YG GQNVRDWLYV+DH A++ V++ Sbjct: 176 VKVTNCTNNYGPYQFPEKLIPLTILNALEGKPIPIYGKGQNVRDWLYVKDHCEAIWAVMQ 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDA---LIPKSYSHTELIRFIEDRPGHDRRYA 295 KGRIGE YNI GN E++NID+V EI +L +P+ + LI F+ DRPGHD RYA Sbjct: 236 KGRIGETYNISGNEEKRNIDVVKEICQILAEELDRLPEEFK--SLITFVADRPGHDLRYA 293 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +DSSKI+ E+GW P+E +GL KTV WYL N W Sbjct: 294 LDSSKIRCELGWKPKETFNTGLRKTVKWYLSNTEW 328 >gi|9957803|gb|AAG09492.1|AF279643_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] gi|9957805|gb|AAG09493.1|AF279644_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHSDICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|16264650|ref|NP_437442.1| putative dTDP-D-glucose 4,6-dehydratase protein [Sinorhizobium meliloti 1021] gi|307303496|ref|ZP_07583250.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti BL225C] gi|307318653|ref|ZP_07598086.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti AK83] gi|1890603|emb|CAB01951.1| ExpA9 [Sinorhizobium meliloti] gi|15140788|emb|CAC49302.1| putative dTDP-D-glucose 4,6-dehydratase protein WgaI (formerly ExpA9) [Sinorhizobium meliloti 1021] gi|306895680|gb|EFN26433.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti AK83] gi|306902887|gb|EFN33479.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti BL225C] Length = 356 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/341 (51%), Positives = 241/341 (70%), Gaps = 4/341 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+CR+L+ + +V+ +DKLTYAG+L SL+ + ++F + DI Sbjct: 1 MRVLVTGGAGFIGSAVCRHLIRNGAERVVNVDKLTYAGSLASLRAVESDPHYAFYRADIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ + DAI++ AAESHVDRSI D F+ TN++GT LL +WS L Sbjct: 61 DEQVLLQIMRRERIDAIMHLAAESHVDRSIESPDPFMETNVLGTVRLLNAALAYWSGLGT 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ +FRF +STDEV+G L ++G+FSE+ Y PSSPY+A+KA++D+ AW HTYG+P Sbjct: 121 EERGRFRFHHVSTDEVFGDLPFNRGIFSEETRYAPSSPYAASKAAADHFARAWYHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP+HFPEKLIPL I IE + LYG G NVRDWL+V DH AL LV+ Sbjct: 181 VVVSNCSNNYGPFHFPEKLIPLTIINAIEEKPLPLYGSGANVRDWLHVADHATALELVVS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAI 296 +GR GE YNIG ER N+ ++ I LLD +P+ S+ +LI + DRPGHDRRYAI Sbjct: 241 RGRPGESYNIGARAERNNLSVMECICDLLDVRLPRKGGDSYRDLITLVPDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D SK + E+GW P+ + E GL++TV W+L N WWW P+ +E Sbjct: 301 DPSKAERELGWRPKRSFEGGLSETVDWFLANRWWWEPIRRE 341 >gi|254246152|ref|ZP_04939473.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia cenocepacia PC184] gi|124870928|gb|EAY62644.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia cenocepacia PC184] Length = 353 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/352 (52%), Positives = 240/352 (68%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLDGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + L E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L+ Sbjct: 62 DALDALLAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTDCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDKARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQVW-----ADEVASGEYRKWVETN 348 >gi|299137003|ref|ZP_07030186.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX8] gi|298601518|gb|EFI57673.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX8] Length = 360 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/353 (50%), Positives = 246/353 (69%), Gaps = 9/353 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + V+ K +V+ +D LTYA +L +L ++ + +F+Q +ICD Sbjct: 5 ILVTGGAGFIGSNFVLHWVHSGKGRVINLDALTYASHLGNLDSLAGNPDHTFVQGNICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + +P A+++FAAESHVDRSI+G D F+ TNI GTF LL+ R + + LS+D+ Sbjct: 65 EFVANIFATHKPKAVIHFAAESHVDRSIVGPDAFLKTNIDGTFTLLQAARTYMATLSEDE 124 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF+ +STDEVYG+L D FSE PY P+SPY+A+KA+SD+L AW HTY +PVL Sbjct: 125 KKAFRFVHVSTDEVYGTLGPDDPAFSESTPYAPNSPYAASKAASDFLARAWFHTYNLPVL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP FPEKLIPL I + G + +YGDG VRDWL+V+DH RA+ VL+KG Sbjct: 185 VTNCSNNYGPCQFPEKLIPLIIANALAGKSLPIYGDGLQVRDWLFVKDHCRAIIDVLEKG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+G+ YNIGG N+R N+++V I LLD L+P S H +LI +++DRPGHDRRYAID+ Sbjct: 245 RLGQTYNIGGRNQRSNLEVVKTICALLDELVPSSPHKPHNQLITYVKDRPGHDRRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 KI+ E+ W P+E+ E+G+ KTV WYL N W E Y +W +LN Sbjct: 305 DKIERELKWKPEESFETGIRKTVEWYLANGRWI-----EAVTGTAYQQWVSLN 352 >gi|9957809|gb|AAG09495.1|AF279646_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFELADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|165976900|ref|YP_001652493.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877001|gb|ABY70049.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 357 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/340 (55%), Positives = 248/340 (72%), Gaps = 6/340 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ RY++ + V+ +DKLTYAGNL SL+ +S S+ + F Q DIC Sbjct: 1 MKILITGGAGFIGSAVIRYIIQHTQDSVVNVDKLTYAGNLASLESVSNSSRYHFEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I ++QPD +++ AAESHVDRSI G F+ TNIIGT+ LLE +R +W L Sbjct: 61 DSTRISQIFCKYQPDVVMHLAAESHVDRSIDGPAAFMQTNIIGTYTLLEASRQYWLSLPL 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LFSE+ Y+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 ERKQTFRFQHISTDEVYGDLNDSNELFSENTAYSPSSPYSASKAASDHLVRAWFRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+ FPEKLIPL I I G + +YG+G +RDWL+VEDH ALY VL Sbjct: 181 TLVTNCSNNYGPFQFPEKLIPLMILNAISGKPLPIYGNGLQIRDWLFVEDHAIALYQVLC 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V I LLD L+P S + EL+ ++ DRPGHD RY Sbjct: 241 RGKVGETYNIGGHNEKTNIEVVQAICRLLDELVPNKPSGIEQYEELVTYVADRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID+SKI++++GW P+E ESGL KTV WYL+N WW+ + Sbjct: 301 AIDASKIENQLGWTPKETFESGLRKTVEWYLNNQKWWQSV 340 >gi|9957787|gb|AAG09484.1|AF279635_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVIRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFELADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNSVTLSLFTETTSYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALHI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|167586358|ref|ZP_02378746.1| dTDP-glucose 4,6-dehydratase [Burkholderia ubonensis Bu] Length = 353 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/352 (52%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ ++ VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLHHNDEPVLNVDKLTYAGNLRTLQSLDGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E P A+V+FAAESHVDRSI G +F+ TN++GTF LLE R W+ LS Sbjct: 62 AALDALFAEHTPRAVVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARAHWNGLSDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAGFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPIYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD PK+ S+ + I +++DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDGARPKATGSYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVHWYLDNQAWVDDVVS-----GEYRKWVETN 348 >gi|332705313|ref|ZP_08425391.1| dTDP-glucose 4,6-dehydratase [Lyngbya majuscula 3L] gi|332355673|gb|EGJ35135.1| dTDP-glucose 4,6-dehydratase [Lyngbya majuscula 3L] Length = 365 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/344 (53%), Positives = 236/344 (68%), Gaps = 13/344 (3%) Query: 2 RLIVTGGAGFIGSAL----CRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 +L+VTGGAGFIGS C D +V+V+D LTYAGN +L + F+Q Sbjct: 16 QLLVTGGAGFIGSNFVHHWCEQYPGD---RVVVLDALTYAGNRQNLAGLEDKANLRFVQG 72 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICDR + L+E D + +FAAESHVDRSILG D FI TN++G+F LLE R W Sbjct: 73 DICDRILVDRLLQEESIDTVAHFAAESHVDRSILGPDAFIRTNVVGSFTLLESFRQQWQ- 131 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +Q + +RFL +STDEVYGSL D F E PY P+SPYSA+KA SD+L A+ HTY Sbjct: 132 -NQGQPRDYRFLHVSTDEVYGSLSADDPAFCETTPYAPNSPYSASKAGSDHLARAYYHTY 190 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWLYV DH RAL + Sbjct: 191 GVPTIITNCSNNYGPYHFPEKLIPLMCINILLGKSLPVYGDGQNIRDWLYVGDHCRALDV 250 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRR 293 V+ KG+ GE YNIGGNNE KN+D+V +I L++ L P +LI F++DRPGHDRR Sbjct: 251 VIHKGQPGETYNIGGNNEVKNLDLVHQICELMNELAPDLPVAPAQQLITFVKDRPGHDRR 310 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 YAID++KIK+E+GW P E + GL KT+ WYL N WW+PL + Sbjct: 311 YAIDATKIKTELGWVPTETLAGGLRKTIEWYLSNRDWWQPLLSQ 354 >gi|159154711|gb|ABW93695.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis] Length = 356 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/325 (53%), Positives = 235/325 (72%), Gaps = 6/325 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQHMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 QHKAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ + Sbjct: 183 IVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTE 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYA 295 G +GE YNIGG+NE+ NI++V I LL+ L+P+ + + +LI F++DRPGHD RYA Sbjct: 243 GVVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKT 320 +D++KI ++ P E ESG KT Sbjct: 303 VDAAKIXRDLXXLPXETXESGXRKT 327 >gi|160896722|ref|YP_001562304.1| dTDP-glucose 4,6-dehydratase [Delftia acidovorans SPH-1] gi|160362306|gb|ABX33919.1| dTDP-glucose 4,6-dehydratase [Delftia acidovorans SPH-1] Length = 356 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/332 (54%), Positives = 232/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL SL+ + F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAAGDEPVLNVDKLTYAGNLKSLESLQGDARHVFVQADIGDG 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E +P A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +WS L + Sbjct: 62 QTLARLLAEHRPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRGYWSALDAEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL F+ED Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGSLAPAAPAFTEDHLYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+G+ YN+GG NE+ N++IV + LLD L PK+ S++ I +++DRPGHDRRYAID+ Sbjct: 242 RLGDTYNVGGWNEKPNVEIVNTVCALLDELRPKADGTSYSAQITYVKDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLDNPEW 333 >gi|9957789|gb|AAG09485.1|AF279636_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFELADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNSVTLPLFTETTSYAPSSPYSASKASSDHLVRAWKRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|251792406|ref|YP_003007132.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] gi|247533799|gb|ACS97045.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] Length = 349 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/333 (53%), Positives = 236/333 (70%), Gaps = 6/333 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSAL RYL+ ++V+ +DKLTYA NL SL+ IS + + F Q+DIC Sbjct: 1 MQILITGGAGFIGSALIRYLIQTTDVRVVNVDKLTYAANLASLETISDNPRYIFEQLDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++QPD +V+ AAESHVDRSI G FI +NI+GT+ LLE R ++ LS Sbjct: 61 DSNALARLFMQYQPDCVVHLAAESHVDRSIDGPSAFIQSNIVGTYSLLEAARHYYYTLSA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K+ FRFL +STDEVYG + L +E PY PSSPYSA+KAS+D+LV AW TYG+P Sbjct: 121 EKQAAFRFLHVSTDEVYGDTAGETTLSTETSPYAPSSPYSASKASADHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++++C+NNYGPY + EKLIPL I ++G + +YG+GQ +RDWLYV+DHVRALYLVL Sbjct: 181 TMITHCANNYGPYQYKEKLIPLMIANALDGKPLPIYGNGQQIRDWLYVDDHVRALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +GR+GE YNI + E+ N+DIV I LL+ L P + +LI + DRPGHD RY Sbjct: 241 QGRVGESYNISAHCEKTNLDIVHTICDLLEQLAPNKPIDVAYYRDLIVHVTDRPGHDIRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 AID+ KI+SE+GW P E S + KTV WYL+N Sbjct: 301 AIDAGKIQSELGWQPLEKFPSAMMKTVQWYLNN 333 >gi|218438469|ref|YP_002376798.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7424] gi|218171197|gb|ACK69930.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7424] Length = 354 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 244/342 (71%), Gaps = 7/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS + N+ + +V+V+D LTYAGN ++ + F F+ +I Sbjct: 1 MKILITGGAGFIGSNFVHHWCNNYQSDRVVVLDALTYAGNRQNIAPLEGRENFRFVHGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR I + L+E + + + +FAAESHVDRSILG D FI TN+ GTF LL+ R +W+ Sbjct: 61 CDRALIDTLLREEEIETVAHFAAESHVDRSILGPDAFIQTNVFGTFTLLDSFRHYWT--E 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + +RFL +STDEVYGSL D F+E PY P+SPYSA+KASSD+L A+ HTY + Sbjct: 119 KGRPENYRFLHVSTDEVYGSLEPDDPAFTETTPYAPNSPYSASKASSDHLARAYYHTYNV 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWL+V DH +AL V+ Sbjct: 179 PTIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNIRDWLFVLDHCKALDTVI 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 +KG+ GE YN+GGNNE KNID+V + L+D L P +LI F++DRPGHDRRYA Sbjct: 239 QKGKPGETYNVGGNNEVKNIDLVTLLCELMDELAPDLPVKPSKQLITFVKDRPGHDRRYA 298 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ID++KIK+E+GW P+ +E GL KT+ W+L+N WW+PL + Sbjct: 299 IDATKIKTELGWTPEVTVEEGLRKTIQWFLNNREWWQPLLSQ 340 >gi|83814173|ref|YP_444731.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber DSM 13855] gi|83755567|gb|ABC43680.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber DSM 13855] Length = 342 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/338 (52%), Positives = 237/338 (70%), Gaps = 8/338 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGSA+ R+L+ + + V+ +D LTYAG+ +L + +S F Q DI D Sbjct: 5 LLVTGGAGFIGSAVVRHLIQETEATVVTVDALTYAGHRENLAPVMESPRHHFEQEDITDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +E +PD ++ AAESHVDRSI G F+ TN++GT +LLE R +W Q + Sbjct: 65 PVMHRLFEEHEPDGAIHLAAESHVDRSIGGPAAFVQTNVVGTQVLLEAARTYWE--DQGR 122 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 FRFL +STDEVYG L + G F+E+ PY+PSSPYSA+KA +D+L AW TY +PVL+ Sbjct: 123 PGGFRFLHVSTDEVYGELGETGAFTEETPYDPSSPYSASKAGADHLARAWHRTYDLPVLI 182 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP+ PEKLIP+ I +EG + +YGDG+NVRDWLYV+DHVRAL VL +GR Sbjct: 183 TNCSNNYGPHQHPEKLIPVVILNALEGEPIPVYGDGKNVRDWLYVKDHVRALLRVLTEGR 242 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRYAI 296 +GE YNIGG ER+NI +V +I +LD P ++ SH +LI F+EDRPGHD RYAI Sbjct: 243 VGETYNIGGGQERENIAVVRQICDILDETRPPGSTLETKSHHDLITFVEDRPGHDWRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI+ E+GW P+ + E GL +TV WY+++ W R + Sbjct: 303 DASKIEGELGWAPEVSFEEGLRRTVDWYVEHRDWVRAV 340 >gi|325920444|ref|ZP_08182372.1| dTDP-glucose 4,6-dehydratase [Xanthomonas gardneri ATCC 19865] gi|325549091|gb|EGD20017.1| dTDP-glucose 4,6-dehydratase [Xanthomonas gardneri ATCC 19865] Length = 351 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 230/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVSR-GIRVVNLDALTYAGNLNTLASLEGNADHVFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G F+ TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFVQTNVVGTLALLEAVRDYWKALPDTRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ +TV WYL N W Sbjct: 304 LKDELGWEPAYTFEQGIAQTVEWYLTNQAW 333 >gi|9957799|gb|AAG09490.1|AF279641_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 222/301 (73%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKITQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|222831832|gb|EEE70309.1| predicted protein [Populus trichocarpa] Length = 343 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/324 (56%), Positives = 227/324 (70%), Gaps = 4/324 (1%) Query: 11 FIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSAL 69 FIG+ +L V+ +DKLTYAGN +L + + F Q DICDR+ + L Sbjct: 1 FIGANFVLNWLAQPGADSVVNVDKLTYAGNRKTLASLDGDSRHVFSQTDICDRDALDRLL 60 Query: 70 KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFL 129 E +P AIV+FAAESHVDRSI G EFI TNI+GTF LLE R +W+ L + K FRFL Sbjct: 61 AEHKPRAIVHFAAESHVDRSIHGPAEFIQTNIVGTFTLLEAVRAYWNGLDAEAKAAFRFL 120 Query: 130 QISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNN 187 +STDEV+GSL FSE Y P+SPYSA+KA+SD+LV A+ HTYG+PVL +NCSNN Sbjct: 121 HVSTDEVFGSLGPADPQFSETTAYAPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNN 180 Query: 188 YGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYN 247 YGPYHFPEKLIPL IT + G + +YGDGQNVRDWLYV DH A+ VL +GR+GE YN Sbjct: 181 YGPYHFPEKLIPLMITNALSGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARGRVGETYN 240 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSSKIKSEIG 306 +GG NE N+D+V I LLD L PK+ S+++ I F++DRPGHDRRYAID+ K++ E+G Sbjct: 241 VGGWNEMTNLDVVHTICSLLDQLKPKAAGSYSDQINFVKDRPGHDRRYAIDARKLERELG 300 Query: 307 WFPQENMESGLNKTVCWYLDNNWW 330 W P E ESGL KTV WYLDN W Sbjct: 301 WKPAETFESGLRKTVQWYLDNQPW 324 >gi|171319434|ref|ZP_02908540.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MEX-5] gi|171095363|gb|EDT40342.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MEX-5] Length = 353 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/352 (52%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + D VL +DKLTYAGNL +L+ + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRDSDESVLNVDKLTYAGNLRTLQSLDGDPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L+ Sbjct: 62 TALDALFAEHTPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KTAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCGAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVRTLCDLLDKARPKAAGSYRDQISYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNRVWVDEV-----ASGEYRKWVETN 348 >gi|186471476|ref|YP_001862794.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] gi|184197785|gb|ACC75748.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] Length = 353 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/331 (54%), Positives = 232/331 (70%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N + V+ +DKLTYAGNL +L+ + F++ DICD Sbjct: 2 ILVTGGAGFIGANFVIDWLNRVDETVVNVDKLTYAGNLGTLESLRGDPSHIFVREDICDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L ++QP AI++FAAESHVDRSI G EF+ TN++GTF LLE +W L Sbjct: 62 RAMDYLLDQYQPRAILHFAAESHVDRSIHGPGEFMHTNVVGTFTLLEAAHRYWQALPSAA 121 Query: 123 KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +D+FRFL +STDEV+GSL FSE PY P+SPYSA+KASSD+LV AW HTYG+P L Sbjct: 122 RDEFRFLHVSTDEVFGSLSMHAPPFSERSPYAPNSPYSASKASSDHLVRAWHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGPY FPEKLIPL ITR + G + LYGDG NVRDWLYV DH A+ VL KG Sbjct: 182 TTHCSNNYGPYQFPEKLIPLTITRALAGKPLPLYGDGLNVRDWLYVGDHCNAIRAVLAKG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 R G+ YNIGG NE NID+V + LLD +PK S S+ + I+ + DRPGHDRRYAID+ Sbjct: 242 RPGDTYNIGGWNEVANIDVVHALCRLLDERLPKASGSYLDQIKAVADRPGHDRRYAIDAG 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P+E E+GL +TV WYL + W Sbjct: 302 KLERELGWTPEETFETGLRRTVDWYLAHQRW 332 >gi|89899526|ref|YP_521997.1| dTDP-glucose 4,6-dehydratase [Rhodoferax ferrireducens T118] gi|89344263|gb|ABD68466.1| dTDP-glucose 4,6-dehydratase [Rhodoferax ferrireducens T118] Length = 353 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS ++ QV+ +DKLTYAGNL +L ++ F+Q DI Sbjct: 1 MTILVTGGAGFIGSNFVLDWLDKSDEQVINLDKLTYAGNLQNLASLAGDARHVFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L ++QP A+VNFAAESHVDRSILG EFI TNI+GTF LLE R +WS L Sbjct: 61 DTALVAGLLAQYQPRAVVNFAAESHVDRSILGPGEFIQTNIVGTFNLLEAVRAFWSTLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K FR L +STDEVYGSL K F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 APKAAFRLLHVSTDEVYGSLSKTEPAFTETHRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGP+HFPEKLIPL I G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPFHFPEKLIPLMIINAQAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 GR+GE YN+GG NE+ N+DIV + LLD L P++ + + I ++ DRPGHDRRYAI Sbjct: 241 AGRVGEVYNVGGWNEKPNLDIVHIVCALLDELKPRADGKPYKDQITYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ KI+ E+GW P E ESG+ KTV WYLD+ W Sbjct: 301 NARKIEQELGWKPAETFESGIRKTVQWYLDHPDW 334 >gi|312797099|ref|YP_004030021.1| dTDP-glucose 4,6-dehydratase [Burkholderia rhizoxinica HKI 454] gi|303399369|emb|CBK52869.1| dTDP-glucose 4,6-dehydratase [Burkholderia rhizoxinica HKI 454] gi|312168874|emb|CBW75877.1| dTDP-glucose 4,6-dehydratase [Burkholderia rhizoxinica HKI 454] Length = 359 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/331 (55%), Positives = 228/331 (68%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG + + VL +D LTYAGNL +LK + + L +VDI DR Sbjct: 2 ILVTGGAGFIGGNFVLDWLQRSEEAVLNVDNLTYAGNLRTLKSLEGNPLHWLARVDISDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + P A+V+FAAESHVDRSI G F+ TN++GTF LLE R +WS LS D Sbjct: 62 SALDALFARHAPRAVVHFAAESHVDRSIHGPAAFVQTNVVGTFTLLEAARAYWSGLSADA 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL D F E PY P+SPYSATKA+SD+LV A+ HTYG+P + Sbjct: 122 KTAFRFLHVSTDEVFGSLSPDDPQFCETAPYAPNSPYSATKAASDHLVRAYHHTYGLPTV 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL G Sbjct: 182 TTHCSNNYGPYQFPEKLIPLTIVSALAGKPLPIYGDGQNVRDWLYVRDHCSAIRKVLFYG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ YN+GG NE+ NI++V + LLDAL PK S S+ +LI F+ DRPGHDRRYAID+ Sbjct: 242 EPGQTYNVGGWNEKTNIEVVQSVCDLLDALKPKASGSYRDLIAFVADRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E ESGL KTV WYLDN W Sbjct: 302 KIERELGWKPAETFESGLKKTVQWYLDNQDW 332 >gi|134094383|ref|YP_001099458.1| dTDP-glucose 4,6 dehydratase [Herminiimonas arsenicoxydans] gi|133738286|emb|CAL61331.1| dTDP-glucose 4,6 dehydratase [Herminiimonas arsenicoxydans] Length = 367 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/358 (51%), Positives = 238/358 (66%), Gaps = 9/358 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + V+ +DKLTYAGN N+L + F+ DICD Sbjct: 2 ILVTGGAGFIGSNFVLDWLAQSDEPVVNVDKLTYAGNPNNLASLRDDTRHIFVHADICDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ L ++P AIV+FAAESHVDRSI G EF+ TNI GTF LLE R +W L+ + Sbjct: 62 DKMQELLSTYKPTAIVHFAAESHVDRSIHGPAEFVRTNINGTFSLLEAARTYWPQLTSAE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+QFRFL +STDEVYG+L D FSE Y P+SPYSA+KA+SD+LV ++ HTYG+P L Sbjct: 122 KEQFRFLHVSTDEVYGTLGPDDAPFSETTAYAPNSPYSASKAASDHLVRSYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLIIANALAGKPLPIYGDGQQIRDWLYVGDHCTAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRRYAIDS 298 + GE YNIGG NE+ N+D+V + +LDAL P S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 KPGETYNIGGWNEKANLDVVNTLCDMLDALQPNGAGSSYRKQITYVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCN 356 KI+ E+GW P E +SG+ KTV WYL+N W R + DY KW N N Sbjct: 302 RKIERELGWKPAETFDSGIRKTVQWYLENQAWVRDVQS-----GDYMKWLEKNYQQRN 354 >gi|150376857|ref|YP_001313453.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium medicae WSM419] gi|150031404|gb|ABR63520.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium medicae WSM419] Length = 356 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 243/341 (71%), Gaps = 4/341 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+CR+L+ +V+ +DKLTYAG+L SL+ + ++F + DI Sbjct: 1 MRVLVTGGAGFIGSAVCRHLIRCGAERVVNVDKLTYAGSLASLRAVEGDPRYAFYRADIL 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ + DAI++ AAESHVDRSI G D F+ TN++GT LL +WS L Sbjct: 61 DEKVLLQIMRRERVDAIMHLAAESHVDRSIEGPDLFMETNVLGTVRLLNAALAYWSGLGL 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +++FRF +STDEV+G L ++G+FSE+ Y PSSPY+A+KA++D+ AW TYG+P Sbjct: 121 EGQERFRFHHVSTDEVFGDLPFNRGIFSEESRYAPSSPYAASKAAADHFARAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP+HFPEKLIPL I IE + LYG G NVRDWL+V+DH AL LV+ Sbjct: 181 VVVSNCSNNYGPFHFPEKLIPLTIINAIEEEPLPLYGSGANVRDWLHVDDHAAALDLVIS 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 +GR GE YNIG ER N+ ++ I L+D +P+ S+ +LI + DRPGHDRRYAI Sbjct: 241 QGRPGESYNIGARAERNNLSVMESICDLIDMKLPRKGGGSYRDLITLVPDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D SK++ E+GW P+ + E+GL++TV W+L N WWW P+ +E Sbjct: 301 DPSKVERELGWRPKRSFEAGLSETVDWFLANRWWWEPIRRE 341 >gi|289451158|gb|ADC94073.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Grippotyphosa] Length = 349 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/351 (52%), Positives = 250/351 (71%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++ND K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNDTKEYQVVVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSLIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D L P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVDSICSIMDELHPSGAPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENESWWKEILSGQYKEYY-ENQYEK 348 >gi|9957773|gb|AAG09477.1|AF279628_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] gi|9957775|gb|AAG09478.1|AF279629_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/301 (57%), Positives = 222/301 (73%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL E+S+++ + F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLAEVSENSRYYFEYADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEAGNSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY+ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALYI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAASYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|66769913|ref|YP_244675.1| dTDP-glucose-4,6-dehydratase [Xanthomonas campestris pv. campestris str. 8004] gi|66575245|gb|AAY50655.1| dTDP-glucose-4,6-dehydratase [Xanthomonas campestris pv. campestris str. 8004] Length = 351 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/330 (54%), Positives = 230/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVSR-GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ +TV WYL N W Sbjct: 304 LKDELGWEPAYTFEQGIAQTVDWYLTNQTW 333 >gi|21244310|ref|NP_643892.1| dTDP-glucose 4,6-dehydratase [Xanthomonas axonopodis pv. citri str. 306] gi|21109961|gb|AAM38428.1| dTDP-glucose 4,6-dehydratase [Xanthomonas axonopodis pv. citri str. 306] Length = 351 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 231/330 (70%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNLN+L + + F++ DI DR Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVRVVNLDALTYAGNLNTLAPLEGNPDHVFVKGDIGDRA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + S L E QPDA++NFAAESHVDRSI G FI TN++GT LLE R W L ++++ Sbjct: 64 LVASLLHEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDHWKALPKERQ 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I + DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRASQITHVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+++GW P E G+ +TV WYL N W Sbjct: 304 LKNDLGWEPAYTFEQGIAQTVEWYLTNQAW 333 >gi|222109769|ref|YP_002552033.1| dtdp-glucose 4,6-dehydratase [Acidovorax ebreus TPSY] gi|221729213|gb|ACM32033.1| dTDP-glucose 4,6-dehydratase [Acidovorax ebreus TPSY] Length = 355 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/332 (54%), Positives = 232/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL++L + F+Q DI DR Sbjct: 2 ILVTGGAGFIGANFVLDWLAVGDEPVVNLDKLTYAGNLHNLDSLQGDASHVFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E QP A++NFAAESHVDRSI G ++FI TN++GTF LLE R +W L + Sbjct: 62 TLLDRLLAEHQPRAVINFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRHYWQALPATQ 121 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGSLAPAAAAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKSLPVYGDGMQIRDWLYVKDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ NIDIV + LLD L P+S S+T I ++ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEKPNIDIVNTVCALLDELRPRSDGQSYTTQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYLD+ W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLDHPEW 333 >gi|152978502|ref|YP_001344131.1| dTDP-glucose 4,6-dehydratase [Actinobacillus succinogenes 130Z] gi|150840225|gb|ABR74196.1| dTDP-glucose 4,6-dehydratase [Actinobacillus succinogenes 130Z] Length = 353 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 245/337 (72%), Gaps = 6/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ RY++ + + V+ +DKLTYAGNL SL+ +S + ++F + DIC Sbjct: 1 MKILVTGGAGFIGSAVIRYIIRNTQDSVVNVDKLTYAGNLESLESVSDNPRYTFERTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPDA+++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ LS Sbjct: 61 NRAALDRIFADHQPDAVMHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEAARAYWNGLSA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG L LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 VKKSAFRFHHISTDEVYGDLKDTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP+HFPEKLIPL I ++G + +YG+G +RDWL+VEDH RALY V+ Sbjct: 181 TIVTNCSNNYGPFHFPEKLIPLMILNALDGKKLPVYGNGTQIRDWLFVEDHARALYKVVT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----LIRFIEDRPGHDRRY 294 +G+IGE YNIGG+NE+ NI++V I LL+ L P + E LI ++ DRPGHD RY Sbjct: 241 EGKIGETYNIGGHNEKANIEVVKTICALLEELAPNKPAGVEKYEDLITYVTDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID++KI E+GW P+E E+G+ KTV WYL N WW Sbjct: 301 AIDAAKIGRELGWKPKETFETGIRKTVEWYLANKKWW 337 >gi|260428689|ref|ZP_05782667.1| dTDP-glucose 4,6-dehydratase [Citreicella sp. SE45] gi|260420283|gb|EEX13535.1| dTDP-glucose 4,6-dehydratase [Citreicella sp. SE45] Length = 355 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/339 (51%), Positives = 234/339 (69%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA+ R V D +V+ +D LTYA L+++ ++ + ++F + DI Sbjct: 1 MRILVTGGAGFIGSAVVRRAVADGH-EVINLDALTYAACLDNVAPVADAPGYAFERADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + +P+A+++ AAESHVDRSI G FI TN+ GT+ LL+ R +W +Q Sbjct: 60 DREALDRIFATHRPEAVLHLAAESHVDRSIDGPGAFIDTNVTGTYTLLQAARAFWE--AQ 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-----FSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + FRF +STDEV+G+L G F+ED PY P+SPYSA+KA+SD+LV AW TY Sbjct: 118 GKPESFRFHHVSTDEVFGTLPGGAGAPERFTEDTPYAPNSPYSASKAASDHLVRAWHETY 177 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+L+NCSNNYGPYHFPEKLIP+ I + G + +YG G+NVRDWLYVEDH AL Sbjct: 178 GLPVVLTNCSNNYGPYHFPEKLIPVVILNALAGKPIPIYGKGENVRDWLYVEDHAVALLT 237 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL G++G YNIGG+ ER N+D+V I +LD L P + LI F+ DRPGHD RYA Sbjct: 238 VLTTGKVGRSYNIGGDAERSNLDLVRTICAVLDRLAPGEAPYAGLITFVTDRPGHDLRYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID ++I+ E+GW P +E GL +TV WYLDN WW+ L Sbjct: 298 IDPTRIRDELGWRPSVTLEQGLERTVQWYLDNRDWWQAL 336 >gi|71906876|ref|YP_284463.1| dTDP-glucose 4,6-dehydratase [Dechloromonas aromatica RCB] gi|71846497|gb|AAZ45993.1| dTDP-glucose 4,6-dehydratase [Dechloromonas aromatica RCB] Length = 354 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/355 (51%), Positives = 245/355 (69%), Gaps = 9/355 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + +V+ +D LTYAGNL +L + ++ F++ DI Sbjct: 1 MTILVTGGAGFIGSNFALDWLAQSNERVINLDVLTYAGNLENLASLDGNSRHLFVKGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + L E +P A+VNFAAESHVDRSI G ++FI TNI+GTF LLE R ++ L + Sbjct: 61 DFELVSKLLTEHRPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAFYGQLEK 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K++FRFL +STDEVYGSL D F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 AAKNEFRFLHVSTDEVYGSLATDDPAFTETHQYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 GR+GE YN+GG NE+ N+++V+ + +LD L P+ + ELI ++ DRPGHDRRYAI Sbjct: 241 AGRLGETYNVGGWNEKSNLEVVYTLCAILDELRPRVDGKPYKELITYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 D++KI+ E+GW P E E+G+ KTV WYLD+ W E +Y +W N N Sbjct: 301 DATKIERELGWKPDETFETGIRKTVQWYLDHQDW-----VENVTSGNYRQWVNQN 350 >gi|294102711|ref|YP_003554569.1| dTDP-glucose 4,6-dehydratase [Aminobacterium colombiense DSM 12261] gi|293617691|gb|ADE57845.1| dTDP-glucose 4,6-dehydratase [Aminobacterium colombiense DSM 12261] Length = 363 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/332 (53%), Positives = 242/332 (72%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIG+ L RY++N+ ++ +DKLTYAGN++SL +IS + F+Q DI DR Sbjct: 9 ILVTGGCGFIGNNLVRYILNNYDFTIINLDKLTYAGNVDSLCDISSKERYKFVQGDIGDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R L + +P AI+N AAESHVDRSI G D+F+ TNI+GTF LLEE R +W+ L K Sbjct: 69 NLVRKVLAKEKPWAILNLAAESHVDRSIDGPDDFVQTNIVGTFNLLEEVRYYWNFLEAKK 128 Query: 123 KDQFRFLQISTDEVYGS--LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++FRFL +STDEV+GS LD F+E+ Y+P+SPYSA+KA+SD+LV ++ TYG+P L Sbjct: 129 REKFRFLHVSTDEVFGSLRLDDAAFTENHQYSPNSPYSASKAASDHLVRSYFRTYGLPTL 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGPY FPEKLIPL + + + +YGDGQN+RDWLYV DH AL VL G Sbjct: 189 TTHCSNNYGPYQFPEKLIPLMVLNCLSERALPVYGDGQNIRDWLYVGDHCCALMTVLLNG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 + G+ YNIGGN E+KNI+IV + +LD P+ + ELI F++DRPGHD RYA+++ Sbjct: 249 KAGQTYNIGGNCEKKNIEIVCLVCSILDEKKPRLQGKKYNELITFVKDRPGHDLRYAMNT 308 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+SE+GW E+ E+GL KT+ WYL+NN W Sbjct: 309 EKIRSELGWRAVESFETGLEKTIEWYLNNNIW 340 >gi|9957785|gb|AAG09483.1|AF279634_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFELADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+G+++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGSYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNSVTLPLFTETTSYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVEDHARALHI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|9957801|gb|AAG09491.1|AF279642_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/301 (57%), Positives = 222/301 (73%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKITQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILIALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|322433919|ref|YP_004216131.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX9] gi|321161646|gb|ADW67351.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX9] Length = 366 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/334 (52%), Positives = 238/334 (71%), Gaps = 6/334 (1%) Query: 3 LIVTGGAGFIGS--ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIGS L + +++ +DKLTYAGN +L+ + + ++F+Q DI Sbjct: 7 ILVTGGAGFIGSNFVLDWFAQPAQATRLINLDKLTYAGNPANLESLRGNPGYTFVQGDIN 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E QP AIV+FAAESHVDRSI+G + F+ TNI GTF LL+ + +++ L+ Sbjct: 67 DAALVAKLFAEHQPKAIVHFAAESHVDRSIVGPEAFLKTNIDGTFTLLQAAKNYYATLTP 126 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++++ FRFL +STDEVYG+L + F E PY P+SPY+A+KA+SD+LV AW HTYG+P Sbjct: 127 ERQEDFRFLHVSTDEVYGTLAPEDPAFHEKTPYAPNSPYAASKAASDHLVRAWFHTYGLP 186 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL IT +EG + +YGDGQ +RDWLYV DH AL VL Sbjct: 187 TIITNCSNNYGPYHFPEKLIPLMITHALEGKPLPIYGDGQQIRDWLYVRDHCSALRTVLA 246 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 GR+GE YN+GG N+R N+ +V + +LD L P S H +LIR++ DRPGHDRRYAI Sbjct: 247 TGRVGETYNVGGGNQRSNLQVVNRLCEILDELRPDSPHAPHAQLIRYVTDRPGHDRRYAI 306 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++SE+ W QE+ E+GL KTV WYL N+ W Sbjct: 307 DARKLESELNWHAQESFETGLRKTVEWYLANSPW 340 >gi|9957781|gb|AAG09481.1|AF279632_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] gi|9957783|gb|AAG09482.1|AF279633_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/301 (57%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFELADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+G+++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGSYVLLEVARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNSVTLPLFTETTSYAPSSPYSASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|209883706|ref|YP_002287563.1| dTDP-glucose 4,6-dehydratase [Oligotropha carboxidovorans OM5] gi|209871902|gb|ACI91698.1| dTDP-glucose 4,6-dehydratase [Oligotropha carboxidovorans OM5] Length = 361 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/332 (54%), Positives = 233/332 (70%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IVTGGAGFIGS R + + V+ +DKLTYAGNL +L ++ L F+ DICD Sbjct: 11 IIVTGGAGFIGSNFIRCWIANEPTAVINLDKLTYAGNLENLSDLPGERL-EFVHGDICDS 69 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ L +P AI++FAAESHVDRSI G D FITTN++GT LLE TR +W L D+ Sbjct: 70 ALVKGLLARRRPRAIIHFAAESHVDRSIHGPDAFITTNVVGTSCLLECTRDYWQRLPADE 129 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF+ +STDEVYG L ++ F+E P+ P+SPY+A+KA+SD++ AW HTYG+PV+ Sbjct: 130 QAAFRFIHVSTDEVYGMLTPEEPAFTEQHPFRPNSPYAASKAASDHIARAWHHTYGLPVI 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDG VRDWL+VEDH A+ L G Sbjct: 190 TTNCSNNYGPYQFPEKLIPLMIHNALAGKPLPVYGDGLQVRDWLHVEDHCDAIRSTLATG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YNIGGN+E+ NI +V I LLDA P++ S+ I F+ DRPGHDRRYAIDS Sbjct: 250 RLGETYNIGGNSEKPNIAVVQTICDLLDAERPRADGKSYRTQIAFVTDRPGHDRRYAIDS 309 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI+SE+GW P+E ESGL KTV WYL N W Sbjct: 310 TKIQSELGWTPRETFESGLRKTVRWYLANQVW 341 >gi|78065443|ref|YP_368212.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. 383] gi|77966188|gb|ABB07568.1| dTDP-glucose 4,6-dehydratase [Burkholderia sp. 383] Length = 353 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ ++ S F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVIDWLCQSDEAVLNVDKLTYAGNLRTLQSLNGSPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E +P AI++FAAESHVDRSI G EF+ TN++GTF LLE R +WS L + Sbjct: 62 AALDALLAEHRPRAILHFAAESHVDRSIHGPAEFVQTNVVGTFTLLEAARQYWSALPDAE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 QAGFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE N+D+V + LLD P++ ++ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEMTNLDVVHTLCDLLDDARPRAQGTYRDQITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E +GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPDETFATGLAKTVSWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|221213796|ref|ZP_03586770.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] gi|221166585|gb|EED99057.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] Length = 353 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 237/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLEGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLDA PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDAKRPKATGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQQWVDEV-----ASGEYRKWVETN 348 >gi|161525765|ref|YP_001580777.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|189349513|ref|YP_001945141.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|160343194|gb|ABX16280.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|189333535|dbj|BAG42605.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] Length = 353 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 237/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASGEAVLNVDKLTYAGNLRTLQSLEGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLDA PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDAKRPKATGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQQWVDEV-----ASGEYRKWVETN 348 >gi|304310331|ref|YP_003809929.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium HdN1] gi|301796064|emb|CBL44268.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium HdN1] Length = 356 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 230/334 (68%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGNL +L E+ + F+Q DI Sbjct: 1 MTILVTGGAGFIGSNFVLDWLATCSEPVVNLDKLTYAGNLENLAELEGNPRHIFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + S ++E QP A++NFAAESHVDRSI G + FI TNI+GTF LLE R WW L Sbjct: 61 DTALVESLMREHQPRAVLNFAAESHVDRSIHGPEAFIQTNIVGTFRLLEAVRSWWGQLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K +FRFL +STDEVYGSL+K F+E Y P+SPYSA+KASSD+LV A+ HTYG+P Sbjct: 121 DGKVRFRFLHVSTDEVYGSLEKTAPAFTESHSYEPNSPYSASKASSDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIVNALSGKPLPVYGDGQQIRDWLYVKDHCAAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G GE YN+GG NE+ N+DIV E+ LLD L P+ + I + DRPGHDRRYAI Sbjct: 241 AGVCGETYNVGGWNEKANLDIVTEVCALLDELRPREDGVHYRMQITHVPDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ E+ W P E +G+ KTV WYLD+ W Sbjct: 301 DARKIERELHWRPAETFATGIRKTVQWYLDHPQW 334 >gi|217970541|ref|YP_002355775.1| dTDP-glucose 4,6-dehydratase [Thauera sp. MZ1T] gi|217507868|gb|ACK54879.1| dTDP-glucose 4,6-dehydratase [Thauera sp. MZ1T] Length = 356 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 227/331 (68%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + + V+ +D LTYAGN +L + F+ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLQGSEEPVINLDALTYAGNRETLARLEGDARHLFVHGDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++P A+V+FAAESHVDRSI G F+ TN+ GTF LLE R WS L + Sbjct: 62 ALVERLFAEYKPRAVVHFAAESHVDRSIHGPGAFVRTNVDGTFTLLEAARAHWSALPAGE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRFL +STDEVYGSL + F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 REAFRFLHVSTDEVYGSLGPNDPAFTETKAYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIVNALAGKPLPIYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 R+GE YN+GG NE N++IV + LLD L P + SH LI +++DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEMANLEIVHTLCALLDELRPSAAGSHARLITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E +SG+ KTV WYLDN W Sbjct: 302 KIERELGWRPAETFQSGIRKTVRWYLDNPAW 332 >gi|221634576|ref|YP_002523264.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides KD131] gi|221163449|gb|ACM04411.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides KD131] Length = 346 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/335 (53%), Positives = 235/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LIVTGGAGFIGSA+ R V D V+ +D LTYA L++L ++ + + F + DI Sbjct: 1 MKLIVTGGAGFIGSAVVRKAVADGH-HVVNLDCLTYAACLDNLASVAGAPNYVFEKADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +PDA+++ AAESHVDRSI G FI TN+ GT++LLE R +W + Q Sbjct: 60 DAEAMARVFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYW--VGQ 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G+L + G F+E+ PY P+SPYSA+KA+SD+LV AWG TYG+P Sbjct: 118 GKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETYGLPY 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKLIP+ I + + G+ + +YG G+NVRDWLYVEDH AL VL + Sbjct: 178 VLTNCSNNYGPFHFPEKLIPVVILKALAGAPIPVYGKGENVRDWLYVEDHADALLTVLAR 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YNIGG NE KNIDIV +I +LDA PK+ + + I F+ DRPGHD RYAID + Sbjct: 238 GENHRSYNIGGENEAKNIDIVRKICAILDARRPKATPYADQIAFVTDRPGHDLRYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P ++ GL +TV WYL N WWR L Sbjct: 298 RIRTELGWRPSVTLDEGLERTVDWYLANEPWWRAL 332 >gi|213582939|ref|ZP_03364765.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 310 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/295 (57%), Positives = 215/295 (72%), Gaps = 6/295 (2%) Query: 46 ISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTF 105 ++QS+ F+F +VDICDR + +++QPD++++ AAESHVDRSI G FI TNI+GT+ Sbjct: 2 VAQSDRFAFEKVDICDRASLEQVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTY 61 Query: 106 ILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKAS 163 LLE R +WS L D K FRF ISTDEVYG L F+E PY PSSPYSA+KAS Sbjct: 62 TLLEAARAYWSALDADAKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKAS 121 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 SD+LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDW Sbjct: 122 SDHLVRAWLRTYGLPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDW 181 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTE 279 LYVEDH RALY V+ G +GE YNIGG+NERKN+D+V I LL+ L P+ ++ + Sbjct: 182 LYVEDHARALYHVVTNGAVGETYNIGGHNERKNLDVVRTICALLEELAPQKPQGVANYHD 241 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 LI F++DRPGHD RYAID+SKI E+GW PQE ESG+ KTV WYL N WW+P+ Sbjct: 242 LITFVDDRPGHDLRYAIDASKIARELGWTPQETFESGMRKTVQWYLANEAWWKPV 296 >gi|126464816|ref|YP_001041792.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332561400|ref|ZP_08415715.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides WS8N] gi|126106631|gb|ABN79156.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332274199|gb|EGJ19516.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides WS8N] Length = 346 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 236/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LIVTGGAGFIGSA+ R V D V+ +D LTYA L++L ++ + + F + DI Sbjct: 1 MKLIVTGGAGFIGSAVVRKAVADGH-HVVNLDCLTYAACLDNLASVAGAPNYVFEKADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +PDA+++ AAESHVDRSI G FI TN+ GT++LLE R +W + Q Sbjct: 60 DAEAMARVFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYW--VGQ 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + FRF ISTDEV+G+L + G F+E+ PY P+SPYSA+KA+SD+LV AWG TYG+P Sbjct: 118 GRPEGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETYGLPY 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKLIP+ I + + G+ + +YG G+NVRDWLYVEDH AL VL + Sbjct: 178 VLTNCSNNYGPFHFPEKLIPVVILKALAGAPIPVYGKGENVRDWLYVEDHADALLTVLAR 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YNIGG NE KNIDIV +I +LDA PK+ + + I F+ DRPGHD RYAID + Sbjct: 238 GENHRSYNIGGENEAKNIDIVRKICAILDARRPKATPYADQIAFVTDRPGHDLRYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P ++ GL +TV WYL N WWR L Sbjct: 298 RIRTELGWRPSVTLDEGLERTVDWYLANEPWWRAL 332 >gi|325268095|ref|ZP_08134741.1| dTDP-glucose 4,6-dehydratase [Kingella denitrificans ATCC 33394] gi|324980480|gb|EGC16146.1| dTDP-glucose 4,6-dehydratase [Kingella denitrificans ATCC 33394] Length = 366 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/340 (51%), Positives = 231/340 (67%), Gaps = 8/340 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSAL R+L+ V+ +DKLTYAGNL++L E+ S +SF + DI Sbjct: 11 MNILITGGAGFIGSALIRHLIRHTDHHVINVDKLTYAGNLDNLAEVQSSLHYSFERADIA 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + +P A+V+ AAESHVD+SI A +FI TN++GTF LLE R +W L + Sbjct: 71 CRSSLDRIFARHRPHAVVHLAAESHVDKSIADAGDFIRTNLVGTFTLLEAARHYWQALPE 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ +FRF +STDEVYG L G F+E PY PSSPYSA+KA SD+LV AW TYG+ Sbjct: 131 AERTRFRFHHVSTDEVYGDLGGGSTDKFTETTPYAPSSPYSASKAGSDHLVRAWQRTYGL 190 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L+++ SNNYG FPEKLIP I + G + +YGDG+ +RDWLYV+DH RALY VL Sbjct: 191 PTLVTHSSNNYGSRQFPEKLIPHMILNALSGRPLPVYGDGRQIRDWLYVDDHARALYCVL 250 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI-----PKSYSHTELIRFIEDRPGHDR 292 +G +GE Y+IGG +ER+NID+V + LL L P + + +LI + DR GHD Sbjct: 251 MRGTVGETYHIGGGSERRNIDVVHAVCDLLQELAPHHKPPHTVHYRDLITHVADRAGHDV 310 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RYA+D+ KI+ E+GW PQE ESGL +TV WYLDN WWR Sbjct: 311 RYAVDTRKIRRELGWQPQETFESGLRQTVQWYLDNERWWR 350 >gi|206561479|ref|YP_002232244.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia cenocepacia J2315] gi|198037521|emb|CAR53458.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia cenocepacia J2315] Length = 353 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 238/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + ++ F +VDICDR Sbjct: 2 ILVTGGAGFIGANYVLDWLRASDEAVLNVDKLTYAGNLRTLQSLDRNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ LS + Sbjct: 62 GALDTLFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEVARQYWNGLSDND 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNIGGWNEKKNLEVVHTLCDLLDRARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+G+ KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGMAKTVDWYLDNQVW-----ADEVASGEYRKWVETN 348 >gi|313201258|ref|YP_004039916.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. MP688] gi|312440574|gb|ADQ84680.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. MP688] Length = 358 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/332 (53%), Positives = 236/332 (71%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + +V+ +DKLTYAGNL +L+ + Q F+ DI DR Sbjct: 5 ILVTGGAGFIGANFVLDWLAAGLGRVINLDKLTYAGNLQNLEAVQQHPDHVFVHGDIGDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AI+NFAAESHVDRSI G ++FI TN++GTF LLEE R +W L + Sbjct: 65 ALVAKLLAEHKPRAILNFAAESHVDRSIHGPEDFIQTNVVGTFHLLEEARHYWGSLDTTE 124 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L F+E PY P+SPYSA+KA+SD+LV A+ HTYG+P L Sbjct: 125 QGAFRFLHVSTDEVYGTLAAHDPAFTETTPYAPNSPYSASKAASDHLVRAYQHTYGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL + + G + +YGDGQ +RDWLYV+DH A+ VL+ G Sbjct: 185 TTNCSNNYGPYHFPEKLIPLCLLNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ N+D+V + +LD L P S+ E I F++DRPGHDRRYAID+ Sbjct: 245 RVGETYNVGGWNEKANLDVVQLLCDILDNLQPLEDGRSYREQITFVKDRPGHDRRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK+ SE+GW PQE+ E+G+ KTV WYL++ W Sbjct: 305 SKLYSELGWKPQESFETGIRKTVAWYLEHQDW 336 >gi|116330830|ref|YP_800548.1| dTDP-glucose 4,6-dehydratase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124519|gb|ABJ75790.1| dTDP-glucose 4,6-dehydratase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 349 Score = 368 bits (944), Expect = e-99, Method: Compositional matrix adjust. Identities = 185/351 (52%), Positives = 247/351 (70%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++N+ + Q++V DKLTYAGNL SL+ + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNENEEYQIIVFDKLTYAGNLKSLEYWKKDPRFIFIKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E D + +FAAESHVDRSILG +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKENVSSIFQEHNFDYVAHFAAESHVDRSILGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KA SD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDTGYFTEETPYAPNSPYSASKAGSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL L L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLTILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRLALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVNSICSIMDEFHPSGVPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYLDN WW+ + YKE N Y K Sbjct: 299 KIEKELGWKPKFVFESALRETVRWYLDNESWWKEILSGQYKEYY-QNQYEK 348 >gi|221214406|ref|ZP_03587377.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] gi|221165663|gb|EED98138.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] Length = 371 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 183/352 (51%), Positives = 237/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 20 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLEGNPKHVFARVDICDR 79 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 80 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNGLNDAD 139 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 140 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 199 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 200 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 259 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD+ PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 260 VPGETYNVGGWNEKKNLEVVHTLCDLLDSKRPKAAGSYRDQITYVTDRPGHDRRYAIDAR 319 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 320 KLERELGWKPAETFETGLAKTVDWYLDNQQWVDEV-----ASGEYRKWVETN 366 >gi|221200999|ref|ZP_03574039.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] gi|221206549|ref|ZP_03579562.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221173858|gb|EEE06292.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221178849|gb|EEE11256.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] Length = 371 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 183/352 (51%), Positives = 237/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 20 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLEGNPKHVFARVDICDR 79 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 80 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNGLNDAD 139 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 140 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 199 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 200 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 259 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD+ PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 260 VPGETYNVGGWNEKKNLEVVHTLCDLLDSKRPKATGSYRDQITYVTDRPGHDRRYAIDAR 319 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 320 KLERELGWKPAETFETGLAKTVDWYLDNQQWVDEV-----ASGEYRKWVETN 366 >gi|163740058|ref|ZP_02147462.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis BS107] gi|161386689|gb|EDQ11054.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis BS107] Length = 350 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 180/339 (53%), Positives = 236/339 (69%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V QV+ +D LTYA L+++ ++ S ++F QVDI Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGH-QVVNLDALTYAACLDNVAAVADSPNYAFEQVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PD +++ AAESHVDRSI G +FI TNI GT+ +LE R +W+ Sbjct: 60 DRAALDTVFARHRPDVVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARKYWA--EA 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + FRF ISTDEVYGSL +F+E+ Y+P SPYSA+KA+SD+LV AWG TYG+ Sbjct: 118 GRPEAFRFHHISTDEVYGSLPADPSVMFTEETGYDPRSPYSASKAASDHLVRAWGETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGPYHFPEKLIP+ I + G + +YGDG NVRDWLYVEDH AL LV+ Sbjct: 178 PVVLTNCSNNYGPYHFPEKLIPVVILNALAGKPLPIYGDGSNVRDWLYVEDHADALLLVV 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 KGR+G YNIGG NER N+++V + +LD P+ S+ + I F+ DRPGHD RYA Sbjct: 238 SKGRVGRSYNIGGENERTNLELVETLCAILDEKRPREDGGSYKDQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I+ E+GW P +E GL +TV WYLDN WWR L Sbjct: 298 IDPSRIRDELGWRPSVTVEEGLARTVQWYLDNESWWRAL 336 >gi|125654613|ref|YP_001033807.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides 2.4.1] gi|77386273|gb|ABA81702.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides 2.4.1] Length = 346 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 179/335 (53%), Positives = 235/335 (70%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LIVTGGAGFIGSA+ R V D V+ +D LTYA L++L ++ + + F + DI Sbjct: 1 MKLIVTGGAGFIGSAVVRKAVADGH-HVVNLDCLTYAACLDNLASVAGAPNYVFEKADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +PDA+++ AAESHVDRSI G FI TN+ GT++LLE R +W + Q Sbjct: 60 DAEAMARIFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYW--VGQ 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEV+G+L + G F+E+ PY P+SPYSA+KA+SD+LV AWG TYG+P Sbjct: 118 GKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETYGLPY 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+HFPEKLIP+ I + + G+ + +YG G+NVRDWLYVEDH AL VL + Sbjct: 178 VLTNCSNNYGPFHFPEKLIPVVILKALAGAPIPVYGKGENVRDWLYVEDHADALLTVLAR 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YNIGG NE KNIDIV +I +LDA PK+ + + I F+ DRPGHD RYAID + Sbjct: 238 GENHRSYNIGGENEAKNIDIVRKICAILDARRPKATPYADQIAFVTDRPGHDLRYAIDPT 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I++E+GW P ++ GL +TV WYL N WWR L Sbjct: 298 RIRTELGWRPSVTLDEGLERTVDWYLANEPWWRAL 332 >gi|320162335|ref|YP_004175560.1| dTDP-glucose 4,6-dehydratase [Anaerolinea thermophila UNI-1] gi|319996189|dbj|BAJ64960.1| dTDP-glucose 4,6-dehydratase [Anaerolinea thermophila UNI-1] Length = 362 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 184/354 (51%), Positives = 242/354 (68%), Gaps = 9/354 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RYL+ +D ++++ +D LTYAG+L +LK++ +F+Q DICD Sbjct: 5 LLVTGGAGFIGSNFVRYLLAHDPDVRIVNLDLLTYAGSLENLKDLPDPARHTFVQGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +Q D +V+FAAESHVDRSILG +FI TNI+GTF LLE R W Sbjct: 65 RALVEDLFRRYQVDTVVHFAAESHVDRSILGPAQFIQTNIVGTFTLLEAARQAWLKEGIV 124 Query: 122 KKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +Q RF +STDEV+GSL+ F+E PYNP SPYSA+KASSD+LV A+ HTYG+PV Sbjct: 125 PVEQARFHHVSTDEVFGSLEPHDPPFTETTPYNPRSPYSASKASSDHLVRAYHHTYGLPV 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I + G + +YGDGQ VRDWLYVEDH A++ V+ + Sbjct: 185 SITNCSNNYGPYQFPEKLIPLMIFNALNGKPLPIYGDGQQVRDWLYVEDHCEAIWKVVCE 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G++GE YNIGG N N+ +V + +LD L+P S H LI+F+ DRPGHDRRYA+D Sbjct: 245 GKLGETYNIGGGNNPANLQVVHTLCDILDELLPHSPHAPHRSLIQFVADRPGHDRRYAMD 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 KI+ E+GW P+E + SGL KTV WYL + W + ++ +D S W N Sbjct: 305 IRKIQRELGWSPRETLASGLRKTVQWYLSHPDW----IEAIRQTSDLSGWMEKN 354 >gi|119775377|ref|YP_928117.1| dTDP-glucose 4,6-dehydratase [Shewanella amazonensis SB2B] gi|119767877|gb|ABM00448.1| dTDP-glucose 4,6-dehydratase [Shewanella amazonensis SB2B] Length = 377 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 181/377 (48%), Positives = 239/377 (63%), Gaps = 47/377 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG GFIGSA+ R+L++ + V+ +DKLTYA NL S+ E ++S ++ +VDIC Sbjct: 1 MKILVTGGCGFIGSAVIRHLISHTEHSVVNVDKLTYAANLLSVAEAAESARYALERVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + + QPD +++ AAE+HVDRSI GAD FI TNI+GT+ LLE R +W L Sbjct: 61 DRQALGAVFARHQPDVVMHLAAETHVDRSITGADAFIQTNIVGTYTLLEVAREYWRQLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL---------------------------DKGL-----FSED 148 +K+ FRF +STDEV+G L D L F+E Sbjct: 121 MRKNAFRFHHVSTDEVFGDLADQVNAECLVENAELNTDGASSPLSIHDSTLKTAAPFTES 180 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 Y PSSPYSA+KASSD+LV AW TYG+P+++SNCSNNYGP+ +PEKLIPL I + G Sbjct: 181 SAYAPSSPYSASKASSDHLVRAWHRTYGLPIVVSNCSNNYGPFQYPEKLIPLTIQNALAG 240 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 + +YG G RDWLYVEDH RAL V+ +GR+GE YNIGGN+ER+N+++V I +LD Sbjct: 241 KALPVYGQGNQSRDWLYVEDHARALLAVMTRGRVGETYNIGGNSERQNLEVVKSICAILD 300 Query: 269 ALI---------------PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 L P + + LI F+ DRPGHD RYAID+SKI ++GW PQE Sbjct: 301 ELAPLHERTQELNPHHASPNTLHYESLITFVADRPGHDVRYAIDASKITEQLGWKPQETF 360 Query: 314 ESGLNKTVCWYLDNNWW 330 ESGL KTV WY+ N W Sbjct: 361 ESGLRKTVEWYVLNGEW 377 >gi|303250974|ref|ZP_07337163.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253121|ref|ZP_07535002.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650191|gb|EFL80358.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859415|gb|EFM91447.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 357 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 186/340 (54%), Positives = 247/340 (72%), Gaps = 6/340 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ RY++ + V+ +DKLTYAGNL SL+ +S S+ + F Q DIC Sbjct: 1 MKILITGGAGFIGSAVIRYIIQHTQDSVVNVDKLTYAGNLASLESVSNSSRYHFEQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I ++QPD +++ AAESHVDRSI G F+ TNIIGT+ LLE +R +W L Sbjct: 61 DSTRISQIFCKYQPDVVMHLAAESHVDRSIDGPAAFMQTNIIGTYTLLEASRQYWLSLPL 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LFS + Y+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 ERKQTFRFQHISTDEVYGDLNDSNELFSGNTAYSPSSPYSASKAASDHLVRAWFRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP+ FPEKLIPL I I G + +YG+G +RDWL+VEDH ALY VL Sbjct: 181 TLVTNCSNNYGPFQFPEKLIPLMILNAISGKPLPIYGNGLQIRDWLFVEDHAIALYQVLC 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 +G++GE YNIGG+NE+ NI++V I LLD L+P S + EL+ ++ DRPGHD RY Sbjct: 241 RGKVGETYNIGGHNEKTNIEVVQAICRLLDELVPNKPSGIEQYEELVTYVADRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID+SKI++++GW P+E ESGL KTV WYL+N WW+ + Sbjct: 301 AIDASKIENQLGWTPKETFESGLRKTVEWYLNNQKWWQSV 340 >gi|32472000|ref|NP_864994.1| dTDP-glucose-4,6-dehydratase [Rhodopirellula baltica SH 1] gi|32397372|emb|CAD72678.1| dTDP-glucose-4,6-dehydratase [Rhodopirellula baltica SH 1] Length = 392 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 196/379 (51%), Positives = 244/379 (64%), Gaps = 53/379 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL++TGGAGFIGS L R ++ QVL +D LTYAGNL SL +I S + F VDI Sbjct: 13 QRLLITGGAGFIGSNLVRIALS-AGHQVLNVDALTYAGNLASLSDIESSPNYRFAHVDIT 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + + ++QPDAI++ AAESHVDRSI G +FI TN+IGTF LL+ + + L Sbjct: 72 DAAAIDATIADYQPDAIMHLAAESHVDRSIDGPGQFIQTNVIGTFNLLQSSLKHYRSLEA 131 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D KD+FRFL +STDEVYGSL D GLF+E PY P SPYSA+KASSD+L AW TYG+PV Sbjct: 132 DAKDRFRFLHVSTDEVYGSLGDTGLFTETTPYAPHSPYSASKASSDHLARAWQDTYGLPV 191 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIP+AI + ++G + +YG G+N+RDWLYVEDH RAL V++K Sbjct: 192 LVTNCSNNYGPYQFPEKLIPVAILKCLQGEPIPVYGKGENIRDWLYVEDHCRALLTVIEK 251 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-------------------------- 273 G GE YNIGGNNE++NID+V I L+D L PK Sbjct: 252 GTPGETYNIGGNNEQRNIDLVHLICNLMDELCPKVPSPPEMGERARVRGQKNNTPRSTPD 311 Query: 274 -------------------------SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWF 308 S+ LI F+ DRPGHD RYAID+SKI+ E+GW Sbjct: 312 GASRGESQSNKTSLSTSGGEGQGEGERSYASLITFVTDRPGHDLRYAIDASKIQRELGWE 371 Query: 309 PQENMESGLNKTVCWYLDN 327 PQEN++SG KTV WYL+N Sbjct: 372 PQENLQSGFRKTVQWYLNN 390 >gi|294506495|ref|YP_003570553.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber M8] gi|294342823|emb|CBH23601.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber M8] Length = 353 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 173/334 (51%), Positives = 233/334 (69%), Gaps = 8/334 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGSA+ R+L+ + + V+ +D LTYAG+ +L ++ F Q DI D Sbjct: 5 LLVTGGAGFIGSAVVRHLIRETEATVVTVDALTYAGHQENLAPVANHPRHHFEQEDITDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +E+ PD +++ AAESH DRSI G F+ TN++GT +LLE R +W Q + Sbjct: 65 PAMHRLFEEYAPDGVLHLAAESHADRSIGGPAAFVQTNVVGTQVLLEAARTYWE--DQGR 122 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 FRFL +STDEVYG L + G F+E+ PY+PSSPYSA+KA +D+L AW TYG+PVL+ Sbjct: 123 PGGFRFLHVSTDEVYGELGETGAFTEETPYDPSSPYSASKAGADHLARAWQRTYGLPVLI 182 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP PEKLIP+ I +EG + +YGDG+NVRDWLYV+DHVRAL VL++G Sbjct: 183 TNCSNNYGPRQHPEKLIPVVILNALEGEPIPVYGDGKNVRDWLYVKDHVRALLEVLQEGE 242 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRYAI 296 +GE YN+GGN ER+NI +V +I +LD + P ++ SH +LI F+EDRPGHD RYAI Sbjct: 243 VGETYNVGGNCERENIAVVRQICDILDEMRPPGSTLETKSHHDLITFVEDRPGHDWRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D++KIK IGW P+ E GL +TV WY+ + W Sbjct: 303 DATKIKEAIGWAPEVEFEEGLRRTVDWYVGHREW 336 >gi|126726121|ref|ZP_01741963.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2150] gi|126705325|gb|EBA04416.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2150] Length = 346 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 232/335 (69%), Gaps = 4/335 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V V+ +D LTYA L+++ ++ + L++F Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRAAVAQGH-SVVNLDALTYAACLDNVASVADNPLYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +PD +++ AAESHVDRSI G +FI TNI GT+ +LE R +W Sbjct: 60 DRAALDRIFAAHKPDTVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARAYWE--GA 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DK + FRF ISTDEV+GSL + G F+E+ PY+P SPYSA+KA+SD+LV AW TYG+P+ Sbjct: 118 DKPEAFRFHHISTDEVFGSLGETGQFTEETPYDPRSPYSASKAASDHLVRAWHETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+HFPEKLIP+ I + + G + +YGDG NVRDWLYVEDH AL VL + Sbjct: 178 VMSNCSNNYGPFHFPEKLIPVVIIKALAGEPLPIYGDGSNVRDWLYVEDHADALLCVLTR 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YNIGG NER N+++V + +LD L P + + + I ++ DRPGHD RYAID Sbjct: 238 GENGRSYNIGGENERSNLELVTTLCAILDRLRPGAAPYADQITYVTDRPGHDARYAIDPQ 297 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I +E+GW P +E GL KTV WYLDN WWR L Sbjct: 298 RIANELGWRPSVTVEEGLEKTVQWYLDNEDWWRAL 332 >gi|254253077|ref|ZP_04946395.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia dolosa AUO158] gi|124895686|gb|EAY69566.1| dTDP-D-glucose 4,6-dehydratase [Burkholderia dolosa AUO158] Length = 353 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 184/352 (52%), Positives = 235/352 (66%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ ++ VL +DKLTYAGNL +L+ ++ F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLHHNDEPVLNVDKLTYAGNLRTLQSLNDDRRHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E P A+V+FAAESHVDRSI G +F+ TN++GTF LLE R W+ L Sbjct: 62 AALDALFAEHTPRAVVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARAHWNGLGDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KGGFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+D+V + LLD+ PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLDVVHTLCDLLDSTRPKATGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPVETFETGLAKTVRWYLDNQAWVDDVVS-----GEYRKWVETN 348 >gi|325915778|ref|ZP_08178080.1| dTDP-glucose 4,6-dehydratase [Xanthomonas vesicatoria ATCC 35937] gi|325538042|gb|EGD09736.1| dTDP-glucose 4,6-dehydratase [Xanthomonas vesicatoria ATCC 35937] Length = 351 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 230/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVSR-GIRVINLDALTYAGNLNTLVSLDGNPNHVFVEGDIGDAA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDARR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 ETFRFLHVSTDEVYGTLGETGKFTESTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRA 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P E G+ +TV WYL N W Sbjct: 304 LKNELGWEPAYTFEQGIAQTVEWYLTNQAW 333 >gi|116327948|ref|YP_797668.1| dTDP-glucose 4,6-dehydratase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|4234803|gb|AAD12971.1| RmlB [Leptospira borgpetersenii] gi|116120692|gb|ABJ78735.1| dTDP-glucose 4,6-dehydratase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 349 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 185/351 (52%), Positives = 247/351 (70%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS ++N+ + Q++V DKLTYAGNL SL+ + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILNENEEYQIIVFDKLTYAGNLKSLEYWKKDPRFIFIKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E D + +FAAESHVDRSILG +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKENVFSIFQEHNFDYVAHFAAESHVDRSILGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KA SD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDTGYFTEETPYAPNSPYSASKAGSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL L L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLTILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRLALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++D P H++LI++++DRPGHD RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVNSICSIMDEFHPSGVPHSKLIQYVKDRPGHDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYLDN WW+ + YKE N Y K Sbjct: 299 KIEKELGWKPKFVFESALRETVRWYLDNESWWKEILSGQYKEYY-QNQYEK 348 >gi|9957813|gb|AAG09497.1|AF279648_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 175/301 (58%), Positives = 223/301 (74%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F VDICD I Sbjct: 1 TGGAGFIGSAVIRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHVDICDSVEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT+ILLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYILLEVARKYWSALGEDKKNN 120 Query: 126 FRFLQISTDEVYG----------SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG S++ LF+E Y PSSPYSA+KASS +LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVANSVELPLFTETTAYAPSSPYSASKASSGHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYT 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG NE+KN+D+VF I LLD ++PK+ S+ + I ++ DRPGHDRRYA Sbjct: 241 VVTQGKAGEAYNIGGYNEKKNLDVVFTICDLLDEIVPKATSYCKQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|89068414|ref|ZP_01155817.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] gi|89046068|gb|EAR52127.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] Length = 352 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 177/338 (52%), Positives = 235/338 (69%), Gaps = 7/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R V+ QV+ +D LTYA L SL ++ S L++F Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRLSVSRGH-QVVNLDALTYAACLASLASVADSPLYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + PDA+++ AAESHVDRSI G +F+ TNI GT+ +LE R WW + Sbjct: 60 DRAALDQVFAKHAPDAVMHLAAESHVDRSIDGPGDFVETNITGTYNMLEAARAWW--VQA 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + FRF +STDEV+GSL F+E+ PY+P SPYSA+KA+SD+LV AW TY + Sbjct: 118 GRPEGFRFHHVSTDEVFGSLPADPEMKFTEETPYDPRSPYSASKAASDHLVRAWHETYEL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGPYHFPEKL+P+ I + G + +YG G N+RDWLYVEDH AL VL Sbjct: 178 PVVLTNCSNNYGPYHFPEKLVPVVILNALAGKELPIYGRGDNIRDWLYVEDHADALLTVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAI 296 ++G +G YNIGG NER N+++V + +L+ L PK S S+ + I F+ DRPGHD RYAI Sbjct: 238 ERGALGRSYNIGGENERTNLELVHTLCAILNELRPKASGSYADQIAFVADRPGHDGRYAI 297 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + S+I+ E+GW P +E GL +TV WYLDN WWRPL Sbjct: 298 EPSRIRDELGWRPSVTLEEGLRRTVQWYLDNETWWRPL 335 >gi|9957793|gb|AAG09487.1|AF279638_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 172/301 (57%), Positives = 222/301 (73%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAG+L SL +IS+SN ++F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGDLESLSDISESNRYNFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEGARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPY A+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEAENSVTLPLFTETTAYAPSSPYFASKASSDHLVRAWRRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHM 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDRRYA Sbjct: 241 VVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|188993129|ref|YP_001905139.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. campestris str. B100] gi|189040077|sp|B0RVL0|RFBB_XANCB RecName: Full=dTDP-glucose 4,6-dehydratase gi|14090390|gb|AAK53466.1|AF204145_7 dTDP-glucose-4,6-dehydratase [Xanthomonas campestris pv. campestris] gi|167734889|emb|CAP53101.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. campestris] Length = 351 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 179/330 (54%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVSR-GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ TV WYL N W Sbjct: 304 LKDELGWEPAYTFEQGIALTVDWYLTNQTW 333 >gi|322433404|ref|YP_004210621.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX9] gi|321165793|gb|ADW71494.1| dTDP-glucose 4,6-dehydratase [Acidobacterium sp. MP5ACTX9] Length = 379 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 177/333 (53%), Positives = 229/333 (68%), Gaps = 5/333 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIG+ + L+ +DKLTYAGN SL + + + F+ DI D Sbjct: 20 VLITGGAGFIGANFVLDWFKQPNARPLINLDKLTYAGNFASLAPVQDNPAYHFVHGDILD 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + L+E P AI++FAAESHVDRSI G + F+ TNI GTF+LL E ++ L+ + Sbjct: 80 GELVARLLREHHPSAILHFAAESHVDRSISGPEAFLKTNIDGTFVLLREAHTYFQTLTPE 139 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRFL +STDEVYG+L D F ED PY P+SPY+A+KA+SD+LV AW HTY +P Sbjct: 140 EQVTFRFLHVSTDEVYGTLTPDAPAFHEDTPYAPNSPYAASKAASDHLVRAWHHTYKLPT 199 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP FPEKLIPL IT+ + G + +YGDGQ VRDWLYV DH A+ VL Sbjct: 200 LVTNCSNNYGPLQFPEKLIPLMITQALTGKPLPVYGDGQQVRDWLYVGDHCSAIRAVLAG 259 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 GRIGE YN+GG N+R N+ +V + LLD L+P S H +LIRF+ DRPGHDRRYAID Sbjct: 260 GRIGETYNVGGGNQRANLQVVNTLCDLLDELVPHSPYAPHKQLIRFVTDRPGHDRRYAID 319 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + KI+SE+ W E+ E+GL KTV WYL N W Sbjct: 320 ARKIESELNWHATESFETGLRKTVAWYLANTAW 352 >gi|166713453|ref|ZP_02244660.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 351 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GIRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGM 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 64 VVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARS 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P E G+ +TV WYL N W Sbjct: 304 LKNELGWEPAYTFEQGIAQTVHWYLTNQAW 333 >gi|311278962|ref|YP_003941193.1| dTDP-glucose 4,6-dehydratase [Enterobacter cloacae SCF1] gi|308748157|gb|ADO47909.1| dTDP-glucose 4,6-dehydratase [Enterobacter cloacae SCF1] Length = 362 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 196/363 (53%), Positives = 248/363 (68%), Gaps = 19/363 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL EI S + F QVDIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIKNTTDTVINVDKLTYAGNLESLTEIENSERYGFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E+QPDAI++ AAESHVDRSI G+ FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAEMERVFNEYQPDAIMHLAAESHVDRSITGSAVFIETNIIGTYNLLEVARNYWSTLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 +K FRF ISTDEVYG L LF+E Y PSSPYS++KASSD+LV A Sbjct: 121 ARKSAFRFHHISTDEVYGDLPHPDEIAEGETLPLFTEQTAYAPSSPYSSSKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TY +P++++NCSNNYGPYHFPEKLIP+ I + G + +YG+G +RDWLYVEDH Sbjct: 181 WHRTYNLPIVVTNCSNNYGPYHFPEKLIPVTILNALAGKPLPVYGNGTQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIED 286 RALY V+ +G GE YNIGG+NER+NID+V I +LD +I S ++LI + D Sbjct: 241 RALYKVVTEGVNGETYNIGGHNERRNIDVVNTICAILDKIISNKPNGINSFSQLITHVTD 300 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 RPGHD RYAID+SKIK+E+GW P E E+G+ KTV WYL+N WW+ + D YS Sbjct: 301 RPGHDLRYAIDASKIKNELGWIPLETFETGIEKTVVWYLNNKEWWQRVM-----DGSYSS 355 Query: 347 WKN 349 N Sbjct: 356 GHN 358 >gi|221201084|ref|ZP_03574124.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] gi|221206464|ref|ZP_03579477.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221173773|gb|EEE06207.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221178934|gb|EEE11341.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] Length = 353 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/352 (51%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F +VDICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRASDEAVLNVDKLTYAGNLRTLQSLEGNPKHVFARVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L+ Sbjct: 62 AALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWNGLNDAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 KAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDVKRPKATGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVDWYLDNQQWVDEV-----ASGEYRKWVETN 348 >gi|289668424|ref|ZP_06489499.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 351 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 177/330 (53%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 64 LVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPAARS 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ +TV WYL N W Sbjct: 304 LKKELGWEPAYTFEQGIAQTVEWYLTNQAW 333 >gi|58580415|ref|YP_199431.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425009|gb|AAW74046.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 374 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 28 LVTGGAGFIGGNFVLEAVAR-GIRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGM 86 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 87 LVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARS 146 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 147 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 206 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 207 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 266 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 267 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 326 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P E G+ +TV WYL N W Sbjct: 327 LKNELGWEPSYTFEQGIAQTVQWYLTNQAW 356 >gi|332525497|ref|ZP_08401655.1| dTDP-glucose 4,6-dehydratase [Rubrivivax benzoatilyticus JA2] gi|332108764|gb|EGJ09988.1| dTDP-glucose 4,6-dehydratase [Rubrivivax benzoatilyticus JA2] Length = 354 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 181/333 (54%), Positives = 230/333 (69%), Gaps = 3/333 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +D LTYAGNL +L + F++ DI Sbjct: 1 MTILVTGGAGFIGSNFVLDWLRGSDEPVVNLDALTYAGNLENLASLDGDARHVFVRGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L E +P A+V+FAAESHVDRSI G EFI TN+ GT+ LLE R +WS L + Sbjct: 61 DRALVDTLLAEHRPRAVVHFAAESHVDRSIHGPGEFIRTNVNGTYTLLEAARGFWSTLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + QFRF +STDEVYGSL D F+E P+ P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 AVRAQFRFHHVSTDEVYGSLAPDAPAFTETHPFEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGP+HFPEKLIPL I + G + +YGDG+ VRDWLYV DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPFHFPEKLIPLLIVNALAGKPLPVYGDGRQVRDWLYVGDHCSAIRTVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAID 297 +GR GE YN+GG NE+ NI+IV + LLD L P + H LI ++DRPGHDRRYAID Sbjct: 241 RGRPGETYNVGGWNEKPNIEIVHTVCALLDELRPDPAGPHARLITHVKDRPGHDRRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + KI+ E+GW P E E+G+ KTV WYLD+ W Sbjct: 301 ARKIERELGWRPAETFETGIRKTVAWYLDHADW 333 >gi|84622377|ref|YP_449749.1| dTDP-glucose 4,6-dehydratas [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578648|ref|YP_001915577.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366317|dbj|BAE67475.1| dTDP-glucose 4,6-dehydratas [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523100|gb|ACD61045.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 351 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GIRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGM 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 64 LVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARS 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P E G+ +TV WYL N W Sbjct: 304 LKNELGWEPSYTFEQGIAQTVQWYLTNQAW 333 >gi|241763421|ref|ZP_04761475.1| dTDP-glucose 4,6-dehydratase [Acidovorax delafieldii 2AN] gi|241367363|gb|EER61684.1| dTDP-glucose 4,6-dehydratase [Acidovorax delafieldii 2AN] Length = 357 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 179/332 (53%), Positives = 235/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V+GGAGFIG+ + V+ +DKLTYAGNL++L+ + F+Q DI D Sbjct: 2 ILVSGGAGFIGANFVLDWLATCDEPVVNLDKLTYAGNLHNLESLQGDARHIFVQGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ L E +P AIVNFAAESHVDRSI G ++FI TN++GTF LLE R +W L + Sbjct: 62 ALVQRLLAEHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAARHYWQALPAAE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L + F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGTLSAEAPAFTEAHCYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G ++ +YGDG +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIVNALAGKNLPVYGDGMQIRDWLYVKDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NIDIV + LLD L P+S S+ I +++DRPGHDRRYAID+ Sbjct: 242 QLGETYNVGGWNEKPNIDIVNTVCALLDELRPRSDGQSYRAQITYVQDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E +SG+ KTV WYLD+ W Sbjct: 302 RKIERELGWKPAETFDSGIRKTVQWYLDHPEW 333 >gi|196230982|ref|ZP_03129842.1| dTDP-glucose 4,6-dehydratase [Chthoniobacter flavus Ellin428] gi|196224812|gb|EDY19322.1| dTDP-glucose 4,6-dehydratase [Chthoniobacter flavus Ellin428] Length = 354 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 237/336 (70%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSA-LCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVD 58 MRL+VTGGAGFIGS + + L+ ++ LV +DKLTYAGN +L + + F+Q D Sbjct: 1 MRLLVTGGAGFIGSNFVLQQLLERQDVERLVNLDKLTYAGNPANLTPVEKDTRHVFVQGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + I L E DA++NFAAESHVDRSI G + F+ TN++GT LL+ TR +W+ L Sbjct: 61 IGDSDLIAKLLAEHAIDAVLNFAAESHVDRSIDGPEAFVQTNVVGTLRLLQTTRAYWTKL 120 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +KK+ FRFL +STDEVYGSL F+E+ P+ P+SPY+A+KA SD+LV A+ HTYG Sbjct: 121 APEKKNAFRFLHVSTDEVYGSLRPQDPAFTEETPFAPNSPYAASKAGSDHLVRAFHHTYG 180 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PVL +NCSNNYGP FPEKLIPL I +EG + +YGDG NVRDWLYV DH A+ LV Sbjct: 181 LPVLTTNCSNNYGPLQFPEKLIPLMIQNALEGRALPIYGDGMNVRDWLYVRDHCTAIRLV 240 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRY 294 L +GR+GE YN+GG NE+ N+ +V + LLD L P++ S+T L F+ DRPGHDRRY Sbjct: 241 LDRGRVGETYNVGGLNEQPNLAVVDTLCALLDELHPRTDGKSYTTLKTFVADRPGHDRRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID +KI E+GW P E+ +GL KTV WYL N W Sbjct: 301 AIDCAKITRELGWQPAESFTTGLRKTVEWYLANREW 336 >gi|124515992|gb|EAY57501.1| DTDP-glucose 4,6-dehydratase [Leptospirillum rubarum] Length = 357 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 175/337 (51%), Positives = 231/337 (68%), Gaps = 4/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS + + ++L +D+LTYAGN +L+ + + L DI D Sbjct: 3 RWLVTGGAGFIGSNFILAARREKRAEILNLDRLTYAGNTANLESLESDPGYRLLPGDIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ +R AL +F P A+ +FAAESHVDRSI G F+ TN+ GTF LLEE+R ++ L + Sbjct: 63 RDLVRKALADFSPAAVFHFAAESHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFDALPSN 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K +FRFL +STDEV+GSL F+E PY P+SPY+A+KA+SD+ V AW HTYG+PV Sbjct: 123 EKGRFRFLHVSTDEVFGSLSPSDPPFNERTPYAPNSPYAASKAASDHFVRAWFHTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGP+ FPEKL+P AI ++G V +YGDG N+RDWL+VEDH +AL+ V ++ Sbjct: 183 LTTNCSNNYGPFQFPEKLVPTAILSALKGKDVPVYGDGMNIRDWLFVEDHCQALFRVHER 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAID 297 G GE YN+GG NER N+ +V + LLD P+ SH E IRF+ DRPGHDRRYAID Sbjct: 243 GVPGETYNVGGGNERTNLQMVSALLTLLDKKRPRPDGLSHLERIRFVPDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 S++ E+ W P + L KTV WYLDN WW+ L Sbjct: 303 GSRLHRELSWTPAHAFDQALEKTVDWYLDNEAWWKAL 339 >gi|149913027|ref|ZP_01901561.1| hypothetical protein RAZWK3B_03525 [Roseobacter sp. AzwK-3b] gi|149813433|gb|EDM73259.1| hypothetical protein RAZWK3B_03525 [Roseobacter sp. AzwK-3b] Length = 346 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 180/336 (53%), Positives = 238/336 (70%), Gaps = 5/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + +V+ +D LTYAG L ++ ++ + F QVDI Sbjct: 1 MKILVTGGAGFIGSAVVRLAIARGH-EVVNLDALTYAGRLENVASVADDPRYRFEQVDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PDA+++ AAESHVDRSI G +FI TNIIGT+ +LE R W + + Sbjct: 60 DRAELGRVFAQHKPDAVMHLAAESHVDRSIDGPGDFIETNIIGTYNMLEAARTHW--IGE 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + ++FRF ISTDEV+GSL + GLF+E+ PY+P SPYSA+KASSD+LV AW HTYG+PV Sbjct: 118 GRPEEFRFHHISTDEVFGSLGETGLFTEETPYDPRSPYSASKASSDHLVRAWFHTYGLPV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYG +HFPEKLIP I + + +YG G NVRDWLYV+DH AL L ++K Sbjct: 178 VLTNCSNNYGAFHFPEKLIPKVILNALHERAIPVYGQGLNVRDWLYVDDHADALLLAVEK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDS 298 G G YN+GG+NER+NID+V I +LD P+ + S+ +LI F+EDRPGHD RYAID Sbjct: 238 GEPGRSYNVGGHNERRNIDLVHAICDILDDKRPRGTGSYRDLIAFVEDRPGHDARYAIDP 297 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I E+GW P +E GL KTV WYLDN WW+PL Sbjct: 298 DRIMEELGWRPSVTVEQGLEKTVQWYLDNPDWWQPL 333 >gi|21230096|ref|NP_636013.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|189040076|sp|P0C7J0|RFBB_XANCP RecName: Full=dTDP-glucose 4,6-dehydratase gi|21111623|gb|AAM39937.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 351 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG AGFIG V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGRAGFIGGNFVLEAVSR-GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ +TV WYL N W Sbjct: 304 LKDELGWEPAYTFEQGIAQTVDWYLTNQTW 333 >gi|253996733|ref|YP_003048797.1| dTDP-glucose 4,6-dehydratase [Methylotenera mobilis JLW8] gi|253983412|gb|ACT48270.1| dTDP-glucose 4,6-dehydratase [Methylotenera mobilis JLW8] Length = 361 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 181/332 (54%), Positives = 233/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS V V+ +DKLTYAGNL++L + S F+ DI D+ Sbjct: 5 ILVTGGAGFIGSNFVLAWVKQGLGTVVNLDKLTYAGNLDNLVSLEHSAHHVFVHGDIGDQ 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P A+VNFAAESHVDRSI G ++FI TNI+GTF LLE R +W L+ Sbjct: 65 HLVAKLLAEHKPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFHLLEAVRAYWGELNTAD 124 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYGSL K F+E PY P+SPYSA+KASSD+LV ++ HTYG+P L Sbjct: 125 KENFRFLHVSTDEVYGSLGKNDPAFTETTPYAPNSPYSASKASSDHLVRSYHHTYGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YG+G VRDWLYVEDH A+ VL+ G Sbjct: 185 TTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPVYGNGLQVRDWLYVEDHCAAIRRVLEAG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NIDIV + +LDA P++ S+ +LI ++ DRPGHD RYAID+ Sbjct: 245 KVGEVYNVGGWNEKTNIDIVRTLCRMLDAKQPRADGQSYADLITYVADRPGHDIRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI +E+GW P E E+G+ KTV WYL + W Sbjct: 305 TKIATELGWKPAETFETGIEKTVNWYLAHQDW 336 >gi|187477741|ref|YP_785765.1| dTDP-glucose 4,6-dehydratase [Bordetella avium 197N] gi|115422327|emb|CAJ48851.1| dTDP-glucose 4,6-dehydratase [Bordetella avium 197N] Length = 351 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 186/331 (56%), Positives = 229/331 (69%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IVTGGAGFIGS + + V+ +D LTYAGNL +L +++ F+Q +ICDR Sbjct: 2 IIVTGGAGFIGSNFILDWLAGEQEAVVNLDALTYAGNLENLADLAGDARHLFVQGNICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L QP AIV+FAAESHVDRSI +F+ TNI GTF LLE R++W L K Sbjct: 62 TLIDQLLATHQPRAIVHFAAESHVDRSIHDPGDFLRTNIDGTFTLLEAARVYWQGLDDKK 121 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL+ + F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 QAAFRFLHVSTDEVYGSLEPEEAPFTETRAYQPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGPYHFPEKLIPL IT + G + +YGDG +RDWLYV+DH A+ VL+ G Sbjct: 182 TTHCSNNYGPYHFPEKLIPLMITHALSGQRMPIYGDGMQIRDWLYVKDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 R GE YN+GG NE+ NI+IV + LLD L P S S+ LI I DRPGHDRRYAID+ Sbjct: 242 RPGETYNVGGWNEKPNIEIVQAVCDLLDELKPDVSGSYRRLISHIADRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E ESGL KTV WYL N W Sbjct: 302 KIERELGWRPAETFESGLRKTVEWYLANAEW 332 >gi|320107279|ref|YP_004182869.1| dTDP-glucose 4,6-dehydratase [Terriglobus saanensis SP1PR4] gi|319925800|gb|ADV82875.1| dTDP-glucose 4,6-dehydratase [Terriglobus saanensis SP1PR4] Length = 371 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 178/332 (53%), Positives = 233/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS Y + V+ +DKLTYAGNL +L + F+ DI D Sbjct: 5 ILVTGGAGFIGSNYVLYRLAQSGGSVVNLDKLTYAGNLGNLASVVDDPRHIFVHGDIGDL 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ L E++P AIV+FAAESHVDRSILG + F+ TNI GTF++L R ++ L + Sbjct: 65 ALVQQLLNEYKPRAIVHFAAESHVDRSILGPEAFLKTNIDGTFVMLTAARTYYDQLEGFE 124 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KD FRFL +STDEVYG+L + F E P+ P+SPY+A+KASSD+LV AW HTYG+P L Sbjct: 125 KDHFRFLHVSTDEVYGTLGPNDAPFHELTPFAPNSPYAASKASSDHLVRAWFHTYGLPAL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP FPEKLIPL I + G + +YGDGQ VRDWLYV DH RA+ VL+KG Sbjct: 185 ITNCSNNYGPLQFPEKLIPLTIANALAGKALPVYGDGQQVRDWLYVLDHCRAIDAVLEKG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG N++ N+D+V I LLD L P S ELI+F++DRPGHDRRYAID+ Sbjct: 245 KVGETYNVGGGNQQTNLDVVHRICDLLDELAPSSSRALRRELIQFVQDRPGHDRRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW QE+ ++GL KTV WYL++ W Sbjct: 305 RKLEDELGWSAQESFDTGLRKTVQWYLEHPEW 336 >gi|149925745|ref|ZP_01914009.1| dTDPglucose 4,6-dehydratase [Limnobacter sp. MED105] gi|149825862|gb|EDM85070.1| dTDPglucose 4,6-dehydratase [Limnobacter sp. MED105] Length = 342 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 178/334 (53%), Positives = 232/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTG AGFIGS R V+ +D LTYAG+L++L + + +F+ I Sbjct: 1 MTLLVTGSAGFIGSCFVRQHFEHSIEPVVSLDALTYAGHLSTLGPVLKRPEHTFVHASIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+ ++ +P A++NFAAESHVDRSILG EFI TN++GT+ LLE R +W+ L Sbjct: 61 DVNAVRAIFEQHKPRAVLNFAAESHVDRSILGPGEFIETNVVGTYRLLECAREYWNSLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYG+L + FSE Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 EAKAGFRFLHVSTDEVYGTLKPEDAPFSEAKRYEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWL+VEDH R + VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLCIMNALNGKQLPVYGDGQQIRDWLFVEDHTRGIRTVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G +G+ YNIGG NE+ N+D+V I LLD L P++ S++ I F+ DRPGHDRRYAI Sbjct: 241 NGVLGDTYNIGGWNEKANLDVVKLICALLDELQPRADGISYSTQIAFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ E+GW P E E+G+ KTV WYL N W Sbjct: 301 DARKIERELGWKPVETFETGIRKTVQWYLANQAW 334 >gi|13650068|gb|AAK37551.1|AF349575_2 putative dTDP-glucose-4,6-dehydratase [Azospirillum brasilense] gi|46241700|gb|AAS83085.1| putative dTDP-glucose-4,6-dehydratase [Azospirillum brasilense] Length = 357 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 173/338 (51%), Positives = 232/338 (68%), Gaps = 5/338 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSA R+++ + ++ +DKLTYA +L SL +++ ++F QVDIC Sbjct: 1 MRILVTGGAGFIGSAFIRWVLANTAASIVNVDKLTYAADLESLAPFAENPRYAFEQVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R + +P A+++ AAE+HVDRSI G F+ TN++GT LL W L Sbjct: 61 DETELRRVFADHRPTAVIHLAAETHVDRSIDGPMAFVQTNVVGTVTLLRVALDHWRALEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K FRF +STDEV+G+L D G FSE PY P+SPYSA+KA+SD+ V AW TYG+P Sbjct: 121 DAKAAFRFHHVSTDEVFGTLGDDGRFSETTPYAPNSPYSASKAASDHFVRAWHETYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNCSNNYG + FPEKLIPL + ++G + +YG G NVRDWLYV+DH AL+ +L Sbjct: 181 VASNCSNNYGCWQFPEKLIPLMTLKALQGQPLPVYGSGLNVRDWLYVDDHASALWTILTT 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSHTELIRFIEDRPGHDRRYAI 296 GR+GE YN+GG++ER+NID+V I L+D L +P LI + DRPGHD RYAI Sbjct: 241 GRLGESYNVGGDSERRNIDVVHAICDLVDELAGPLPGG-PRRNLITHVTDRPGHDHRYAI 299 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D++K+K+E+GW P E ESG+ +TV WYLDN WW L Sbjct: 300 DATKLKAELGWTPAETFESGIRQTVAWYLDNRAWWERL 337 >gi|296137706|ref|YP_003644950.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber M8] gi|295981875|emb|CBH22833.1| dTDP-glucose 4,6-dehydratase [Salinibacter ruber M8] Length = 355 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 176/349 (50%), Positives = 236/349 (67%), Gaps = 23/349 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGSA+ R+L+ + + V+ +D LTYAG+ +L ++ S F Q DI D Sbjct: 5 LLVTGGAGFIGSAVVRHLIRETEATVVTVDALTYAGHRENLAPVTGSPRHHFEQEDITDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +E +PD ++ AAESHVDRSI G F+ TN++GT +LLE R +W Q + Sbjct: 65 PAMHRLFEEHEPDGAIHLAAESHVDRSIGGPAAFVQTNVVGTQVLLEAARTYWE--DQGR 122 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 FRFL +STDEVYG L + G F+E+ PY+PSSPYSA+KA +D+L AW TYG+PV++ Sbjct: 123 PGGFRFLHVSTDEVYGELGETGAFTEETPYDPSSPYSASKAGADHLARAWQRTYGLPVVI 182 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP PEKLIP+ I +EG + +YGDG NVRDWLYV+DHVRAL VL++GR Sbjct: 183 TNCSNNYGPRQHPEKLIPVVILNALEGEPIPVYGDGTNVRDWLYVKDHVRALLEVLQEGR 242 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIP--------------------KSYSHTELI 281 +GE YNIGGN ER+NI +V +I +LD P ++ SH +LI Sbjct: 243 VGETYNIGGNCERENIAVVRQICGILDETRPPGSTLETKSRETKSRETKSRETKSHHDLI 302 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 F+EDRPGHD RYAID+SKI+ E+GW P+ + E GL +TV WY+++ W Sbjct: 303 TFVEDRPGHDWRYAIDASKIEGELGWAPEVSFEEGLRRTVDWYVEHRDW 351 >gi|319791460|ref|YP_004153100.1| dtdp-glucose 4,6-dehydratase [Variovorax paradoxus EPS] gi|315593923|gb|ADU34989.1| dTDP-glucose 4,6-dehydratase [Variovorax paradoxus EPS] Length = 356 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL +L + + F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWIAQSDEPVVNLDKLTYAGNLETLASLKDNPKHIFVQGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AIVNFAAESHVDRSI G ++F+ TN++GTF LLE R +W+ L D+ Sbjct: 62 ALLDRLLAEHKPRAIVNFAAESHVDRSIHGPEDFVQTNVLGTFRLLESVRGFWNALPADQ 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL K F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 122 KAAFRFLHVSTDEVYGSLSKTDPAFTEENKYEPNSPYSASKAASDHLVRAWHHTYGLPVV 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDG VRDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NI+IV + LLD L PK+ + E I ++ DRPGHDRRYAID+ Sbjct: 242 KLGETYNVGGWNEKPNIEIVNTVCALLDELSPKADGKPYKEQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K++ E+GW P E +SG+ KTV WYL N W R Sbjct: 302 RKLERELGWKPAETFDSGIRKTVEWYLANGEWVR 335 >gi|82701398|ref|YP_410964.1| dTDP-glucose 4,6-dehydratase [Nitrosospira multiformis ATCC 25196] gi|82409463|gb|ABB73572.1| dTDP-glucose 4,6-dehydratase [Nitrosospira multiformis ATCC 25196] Length = 353 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 182/331 (54%), Positives = 239/331 (72%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + ++ +D LTYAGNL +LK + F+Q DI + Sbjct: 2 ILVTGGAGFIGANFVLDWLERSDEAIINLDVLTYAGNLENLKTLEGDKRHVFVQGDIGNS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + LK+++P AI+NFAAESHVDRSI G ++FI TNI+GTF LLE +R +WS L +++ Sbjct: 62 DLLIHLLKDYRPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEASRDYWSRLKENE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K QFRFL +STDEVYGSL D+ F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 KQQFRFLHVSTDEVYGSLAKDEMPFTETHRYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIVNALAGKSLPVYGDGQQIRDWLYVKDHCSAIRRVLEDG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ YNIGG NE+ NI+IV I LLD P+ +S+ LI+++ DRPGHDRRYAID+S Sbjct: 242 IPGQIYNIGGWNEKPNIEIVETICSLLDTFRPREGHSYRNLIKYVADRPGHDRRYAIDAS 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E E+G++KTV WYLDN W Sbjct: 302 KIERELGWRPAETFETGISKTVQWYLDNAAW 332 >gi|74317798|ref|YP_315538.1| dTDP-glucose 4,6-dehydratase [Thiobacillus denitrificans ATCC 25259] gi|74057293|gb|AAZ97733.1| dTDP-glucose 4,6-dehydratase [Thiobacillus denitrificans ATCC 25259] Length = 355 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 183/331 (55%), Positives = 229/331 (69%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGN +L + F+Q DI DR Sbjct: 2 ILVTGGAGFIGANFVLDWLRANDEPVLDLDKLTYAGNPENLAALQGDPRHIFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AIVNFAAESHVDRSI G ++FI TN++GTF LL+E R +W L +++ Sbjct: 62 GLVGKLLSEHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFHLLDEARAYWVSLPEEE 121 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL F+E P+ P+SPYSA+KASSD+LV A+ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGSLGPTDAPFTEQTPFAPNSPYSASKASSDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL + ++G + +YGDG NVRDWLYV DH A+ L+KG Sbjct: 182 TTNCSNNYGPYQFPEKLIPLIVLNAVQGKPLPIYGDGMNVRDWLYVGDHCTAIRAALEKG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSS 299 R GE YNIGG NE NI+IV + LLD + P + + LI ++ DRPGHDRRYAID+S Sbjct: 242 RPGETYNIGGWNEMPNIEIVKTVCALLDEMRPDPAGPYARLITYVTDRPGHDRRYAIDAS 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P E E+G+ KTV WYLDN W Sbjct: 302 KIDRELGWRPAETFETGIRKTVRWYLDNMAW 332 >gi|9957769|gb|AAG09475.1|AF279626_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] gi|9957771|gb|AAG09476.1|AF279627_1 dTDP-D-glucose-4,6-dehydratase [Salmonella enterica] Length = 301 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 172/301 (57%), Positives = 220/301 (73%), Gaps = 10/301 (3%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL EIS+SN + F DICD I Sbjct: 1 TGGAGFIGSAVVRHIIKNTQNTVVNIDKLTYAGNLESLSEISESNRYIFEHADICDSAEI 60 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L +DKK+ Sbjct: 61 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARKYWSALGEDKKNS 120 Query: 126 FRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV AW TY Sbjct: 121 FRFHHISTDEVYGDLPHPDEVDNIVTLPLFTETTAYAPSSPYSASKASSDHLVRAWKRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RAL++ Sbjct: 181 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHI 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ +G +GE YNIGG+NE+KN+++V I LLD ++PK S+ + I ++ DRPGHDRRYA Sbjct: 241 VVTQGEVGETYNIGGHNEKKNLEVVHTICDLLDEIVPKEGSYRDQITYVGDRPGHDRRYA 300 Query: 296 I 296 I Sbjct: 301 I 301 >gi|313500048|gb|ADR61414.1| DTDP-glucose 4,6-dehydratase [Pseudomonas putida BIRD-1] Length = 356 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 228/334 (68%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ + V+ +DKLTYAGNL +L + F+ DI Sbjct: 1 MTILVTGGAGFIGANFVLDWLAGDDEPVVNLDKLTYAGNLQTLSSLQGDKRHIFVHGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L QP AI+NFAAESHVDRSI G FI TN++GTF LLE R +W L++ Sbjct: 61 DSRLVAELLNAHQPRAIINFAAESHVDRSIHGPQAFIETNVVGTFQLLEAARAYWGSLNE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRFL +STDEVYGSL D+ F+E Y P+SPYSA+KA+SD+LV ++ HTYG+P Sbjct: 121 PARQAFRFLHVSTDEVYGSLTADEPAFTETHQYQPNSPYSASKAASDHLVRSYYHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G+ GE YN+GG NE+ N+DIV + LLD L P++ + E I ++ DRPGHDRRYAI Sbjct: 241 AGKAGEVYNVGGWNEKPNLDIVNRVCALLDELRPRADGKPYAEQITYVSDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DARKLEQELGWKPAETFETGIRKTVAWYLDNQDW 334 >gi|84515471|ref|ZP_01002833.1| dTDP-glucose 4,6-dehydratase [Loktanella vestfoldensis SKA53] gi|84510754|gb|EAQ07209.1| dTDP-glucose 4,6-dehydratase [Loktanella vestfoldensis SKA53] Length = 349 Score = 365 bits (937), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 181/338 (53%), Positives = 235/338 (69%), Gaps = 7/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGSA+ R + V+ +D LTYA L+++ ++ + ++F Q DI Sbjct: 1 MKLLITGGAGFIGSAVVRLAIARGH-SVVNLDALTYAACLDNVASVASNPDYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +P A+++ AAESHVDRSI G +FI TNI GTF +LE R +W+ + Sbjct: 60 DRAALDRIFAAHRPGAVMHLAAESHVDRSIDGPADFIATNITGTFNMLEAARAYWT--AT 117 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 DK FRF ISTDEV+GSL DK + F+E PY+P SPYSA+KA SD+LV AW TYG+ Sbjct: 118 DKPATFRFHHISTDEVFGSLPADKAVKFTETTPYDPRSPYSASKAGSDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGPYHFPEKL+P+ I + G + +YGDG NVRDWLYVEDH AL LVL Sbjct: 178 PVVLTNCSNNYGPYHFPEKLVPVIILNALAGKALPIYGDGSNVRDWLYVEDHADALLLVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAI 296 +KG +G YNIGG NER N+ +V + +LD L PK S S+ + I F+ DRPGHD RYAI Sbjct: 238 EKGVLGRSYNIGGENERSNLQLVRTLCAILDDLRPKASGSYADQITFVTDRPGHDARYAI 297 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D S+I+ E+GW P +E GL TV WYLD+ WW+PL Sbjct: 298 DPSRIRDELGWRPSVTVEQGLRLTVQWYLDHAAWWQPL 335 >gi|254462677|ref|ZP_05076093.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2083] gi|206679266|gb|EDZ43753.1| dTDP-glucose 4,6-dehydratase [Rhodobacteraceae bacterium HTCC2083] Length = 329 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 175/308 (56%), Positives = 217/308 (70%), Gaps = 3/308 (0%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 V+ +DKLTYA L ++K ++ + + F Q ICDR + L E QPDAI++ AAESHVD Sbjct: 11 VVNVDKLTYAACLENVKSVTDNENYVFFQAGICDRAAMDRILSETQPDAIMHLAAESHVD 70 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFS 146 RSI G FI TNI GT++LLE R +WS +Q K D FRF +STDEV+GSL G+F+ Sbjct: 71 RSIDGPGAFIETNITGTYMLLEVARSYWS--AQGKPDTFRFHHVSTDEVFGSLGATGMFT 128 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 ED PY+P SPYSA+KA+SD+LV AWG TYG+PV+LSNCSNNYGPYHFPEKL+P+ I + Sbjct: 129 EDTPYDPRSPYSASKAASDHLVRAWGETYGLPVVLSNCSNNYGPYHFPEKLVPVVILNAL 188 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 G + +YG G+NVRDWLYVEDH AL VL KG +G YNIGG NE KNID+V I Sbjct: 189 AGKDIPIYGKGENVRDWLYVEDHADALLTVLTKGALGRSYNIGGENEAKNIDLVNMICAH 248 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 LD + PK + I F+ DRPGHD RYAID ++I+ E+ W P +E GL KTV WYL+ Sbjct: 249 LDQMRPKDTPYANQITFVMDRPGHDMRYAIDPTRIREELNWRPSVTLEQGLEKTVRWYLE 308 Query: 327 NNWWWRPL 334 N WWR L Sbjct: 309 NEEWWRAL 316 >gi|298490027|ref|YP_003720204.1| dTDP-glucose 4,6-dehydratase ['Nostoc azollae' 0708] gi|298231945|gb|ADI63081.1| dTDP-glucose 4,6-dehydratase ['Nostoc azollae' 0708] Length = 362 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 235/331 (70%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIG+ + ++ +DKLTYA NL +L E+ + F+Q D+ + Sbjct: 12 LLVTGGAGFIGANFVLQVRKFKWANIVNLDKLTYASNLQNLAELQDDTNYYFIQGDVNNS 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L+++QPDAI+NFAAE+HVDRSI+ FI TNI+GTF LLE ++ +W L+ K Sbjct: 72 ELLSYLLEKYQPDAIINFAAETHVDRSIISPHNFIQTNIVGTFELLEASKAYWQKLTSPK 131 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K++FRFL ISTDEVYGSL F ED PY P+SPYSA+KA++D+LV ++ HTY +P L Sbjct: 132 KEKFRFLHISTDEVYGSLSSTDPAFREDTPYAPNSPYSASKAAADHLVRSYYHTYNLPTL 191 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP FPEKLIPL I + G + +YGDGQN+RDWLYV DH A+YLVL +G Sbjct: 192 TTNCSNNYGPLQFPEKLIPLTILNALNGKSLPIYGDGQNIRDWLYVRDHCDAIYLVLIEG 251 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 IGE YNI G NE+ N+ +V +I +LD L PK ++ ++ LI FI+DRPGHDRRY ID S Sbjct: 252 CIGETYNICGMNEQTNLVVVEKICAILDKLAPKDNFQYSSLISFIKDRPGHDRRYGIDCS 311 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI +GW P+EN + GL KTV WYL+N+ W Sbjct: 312 KISKNLGWKPKENFDVGLLKTVQWYLNNSAW 342 >gi|260914474|ref|ZP_05920943.1| dTDP-glucose 4,6-dehydratase [Pasteurella dagmatis ATCC 43325] gi|260631575|gb|EEX49757.1| dTDP-glucose 4,6-dehydratase [Pasteurella dagmatis ATCC 43325] Length = 349 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 180/338 (53%), Positives = 238/338 (70%), Gaps = 14/338 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RYL+ + VL +DKLTYA NL L+ + ++ + F QVDICD Sbjct: 3 KILITGGAGFIGSALIRYLLAETPHSVLNVDKLTYAANLEGLQSVVENPRYIFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I ++++QPDAI++ AAESHVDRSILGA +FI TNI+GT+ LLE TR +W L Sbjct: 63 YLTIAKLIEQYQPDAIMHLAAESHVDRSILGAADFIQTNIVGTYQLLEATRQYWQYLPIK 122 Query: 122 KKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK +FRFL ISTDEVYG +LD+ F+E+ Y PSSPYSA+KASSD+LV AW TYG+P+ Sbjct: 123 KKTEFRFLHISTDEVYGDLALDEQAFTENNQYQPSSPYSASKASSDHLVQAWHRTYGLPI 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+++ +NNYGPY +PEKL+PL I R ++G + +YGDGQ RDWL+V DHV ALY VL Sbjct: 183 LVTHSANNYGPYQYPEKLVPLMICRALQGLSLPIYGDGQQRRDWLFVNDHVEALYQVLVN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEI-GFL-----------LDALIPKSYSHTELIRFIEDR 287 G+ GE YNIGGNNE N D+V +I GFL + + +LI F++DR Sbjct: 243 GKEGEHYNIGGNNELTNFDVVSQICGFLNELRQVGDLQIFEPQLTNIQDFNQLICFVQDR 302 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 PGHDRRYA++ +KI +E+GW + + GL TV WY+ Sbjct: 303 PGHDRRYALNLNKIHTELGWQAKTDFTQGLRNTVKWYV 340 >gi|220909661|ref|YP_002484972.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7425] gi|219866272|gb|ACL46611.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7425] Length = 354 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 181/345 (52%), Positives = 237/345 (68%), Gaps = 8/345 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L++TGGAGFIGS RY + + +V+V+D LTYAGNL +L + + + F+ DIC Sbjct: 10 HLLITGGAGFIGSNFVRYWCDRYPQDRVVVLDALTYAGNLETLTPLIEQHRLHFVHGDIC 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L + + D I +FAAESHVDRSILG + F+ TN++GTF LLE R W L Sbjct: 70 DRALVDQILAKHEIDTIAHFAAESHVDRSILGPEAFVRTNVLGTFTLLEAFRHHW--LQL 127 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ RFL +STDEVYGSL FSE PY P+SPYSA+KA SD+LV ++ HTYG+P Sbjct: 128 DQLQHLRFLHVSTDEVYGSLGPTDPAFSETTPYAPNSPYSASKAGSDHLVRSYYHTYGLP 187 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPYHFPEKLIPL ++ G + +YGDG NVRDWLYVEDH RAL V++ Sbjct: 188 TLITNCSNNYGPYHFPEKLIPLMCINLLMGKPLPVYGDGLNVRDWLYVEDHCRALETVIQ 247 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAI 296 GE YNIGGNNE N+++V + L+D + P +LI F++DRPGHDRRYAI Sbjct: 248 HSAPGETYNIGGNNEVTNLELVQTLCDLMDEIAPDLPQRPCRQLITFVKDRPGHDRRYAI 307 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY-KELKP 340 D+SKIK+++GW P N+ GL +TV WY+ + WW+PL ++L P Sbjct: 308 DASKIKTQLGWTPAVNLAEGLRRTVTWYVHHPHWWQPLLSRQLNP 352 >gi|307826124|ref|ZP_07656336.1| dTDP-glucose 4,6-dehydratase [Methylobacter tundripaludum SV96] gi|307732862|gb|EFO03727.1| dTDP-glucose 4,6-dehydratase [Methylobacter tundripaludum SV96] Length = 355 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 179/332 (53%), Positives = 230/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +D LTYAGN +L ++ F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAQFDETVINLDVLTYAGNRENLASVAGDERHHFVQGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L ++QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLE R +W L + Sbjct: 62 TLVAGLLAQYQPRAIINFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAYWGNLQGEA 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL D F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 RQNFRFLHVSTDEVYGSLAKDDPAFTETYRYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YNIGG NE+ NIDIV + LLD L + S+ E I ++ DRPGHDRRYAID+ Sbjct: 242 KVGEVYNIGGWNEKPNIDIVHTVCTLLDELRSQEDGKSYREQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI+ E+GW P E ++G+ KTV WYL+N W Sbjct: 302 SKIERELGWKPAETFDTGIRKTVQWYLENQSW 333 >gi|145588441|ref|YP_001155038.1| dTDP-glucose 4,6-dehydratase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046847|gb|ABP33474.1| dTDP-glucose 4,6-dehydratase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 352 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 182/333 (54%), Positives = 233/333 (69%), Gaps = 5/333 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG +L N ++ +DKLTYAGNL +L + F+ DI D Sbjct: 2 ILVTGGAGFIGGNFVLDWLANSNAEGIVNLDKLTYAGNLATLDSLKDDARHVFIHGDIGD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + L +++P AIVNFAAESHVDRSI G EF+ TNI+GTF LLE R +W+ L Sbjct: 62 KELVTKLLTQYKPRAIVNFAAESHVDRSIHGPAEFVQTNIVGTFNLLECAREYWNSLDGA 121 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K+QFRF +STDEVYGSL F+E Y P+SPYSA+KA+SD+LV AW HTY PV Sbjct: 122 EKEQFRFHHVSTDEVYGSLSAADPAFTETNSYEPNSPYSASKAASDHLVRAWFHTYSFPV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ VRDWLYV DH A+ VL K Sbjct: 182 VTTNCSNNYGPYHFPEKLIPLVILNALNGKPLPIYGDGQQVRDWLYVGDHCSAIREVLAK 241 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G++GE YNIGG NE+ NID+V I +LD L P++ S+ E I F++DRPGHDRRYAID Sbjct: 242 GKLGETYNIGGWNEKANIDVVKIICQILDQLKPRADGKSYAEQITFVKDRPGHDRRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SK++ ++GW P E ++G+ KTV WYL+N W Sbjct: 302 ASKVERDLGWRPAETFDTGIRKTVQWYLENPAW 334 >gi|206601948|gb|EDZ38430.1| DTDP-glucose 4,6-dehydratase [Leptospirillum sp. Group II '5-way CG'] Length = 357 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 174/337 (51%), Positives = 231/337 (68%), Gaps = 4/337 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS + + ++L +D+LTYAGN +L+E+ + L DI D Sbjct: 3 RWLVTGGAGFIGSNFILAARREKRAEILNLDRLTYAGNAANLEELHSDPAYRLLPGDIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ +R L F P A+ +FAAESHVDRSI G F+ TN+ GTF LLEE+R +++ L+ Sbjct: 63 RDLVRKTLDGFSPTAVFHFAAESHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFNSLASS 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K +FRF+ +STDEV+GSL F+E PY P+SPY+A+KA+SD+ V AW HTYG+PV Sbjct: 123 EKGRFRFVHVSTDEVFGSLSPSDPPFNEKTPYAPNSPYAASKAASDHFVRAWFHTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGP+ FPEKL+P AI ++G V +YGDG NVRDWL+VEDH AL+ V ++ Sbjct: 183 LTTNCSNNYGPFQFPEKLVPTAILSALKGRDVPVYGDGMNVRDWLFVEDHCHALFRVRER 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAID 297 G GE YN+GG NE+ N+ +V + LLD P+ SH E IRF+ DRPGHDRRYAID Sbjct: 243 GVPGETYNVGGGNEKTNLQMVSALLTLLDKKRPRPDGLSHLERIRFVPDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 S+++ E+ W P + L KTV WYLDN WW+ L Sbjct: 303 GSRLRRELSWTPAHAFDQALEKTVDWYLDNEPWWKAL 339 >gi|115345655|ref|YP_771836.1| dTDP-glucose 4,6-dehydratase [Roseobacter denitrificans OCh 114] gi|115292976|gb|ABI93428.1| dTDP-glucose 4,6-dehydratase [Roseobacter denitrificans OCh 114] Length = 358 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 181/347 (52%), Positives = 231/347 (66%), Gaps = 16/347 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGSA+ R + V+ +D LTYA L ++ ++ + + F DI Sbjct: 1 MKLLVTGGAGFIGSAVVRQAIAQGH-HVVNLDALTYAACLENVASVADNPAYVFEHADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +PDA+++ AAESHVDRSI G +FI TNI GT+ LLE R +W+ +Q Sbjct: 60 DRAALDRVFASHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYHLLEAARSFWT--AQ 117 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + FRF ISTDEV+GSL G F+E PY+P SPYSA+KA+SD+LV AW TYG+P+ Sbjct: 118 GKPEGFRFHHISTDEVFGSLGATGQFTETTPYDPRSPYSASKAASDHLVRAWAETYGLPI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIP+ I + G + +YG G+NVRDWLYVEDH AL VL K Sbjct: 178 VMTNCSNNYGPYHFPEKLIPVVILNALAGKDIPVYGVGENVRDWLYVEDHADALLTVLAK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY------------SHTELIRFIEDR 287 G +G YNIGG NE KNIDIV I +LD PK+ S+ + I F+ DR Sbjct: 238 GAVGRSYNIGGENEAKNIDIVRMICAILDTKKPKTTPSGSAAAGHDKPSYADQITFVTDR 297 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 PGHD RYAID ++I +E+GW P +E GL KTV WYLDN WWR L Sbjct: 298 PGHDLRYAIDPTRIATELGWRPSVTLEEGLEKTVQWYLDNEDWWRAL 344 >gi|134297308|ref|YP_001121043.1| dTDP-glucose 4,6-dehydratase [Burkholderia vietnamiensis G4] gi|134140465|gb|ABO56208.1| dTDP-glucose 4,6-dehydratase [Burkholderia vietnamiensis G4] Length = 352 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 231/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGNL +L + F+Q D+ Sbjct: 1 MTILVTGGAGFIGSNFVLDWLAQSNEPVINLDKLTYAGNLENLASLQGDARHIFVQGDLG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L E +P A+++FAAESHVDRSI G ++FI TNI+GTF LLE R +WS L Sbjct: 61 DRALVDRLLAEHRPRAVLHFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAYWSALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRFL +STDEVYG+L D F+E Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 PEKSAFRFLHVSTDEVYGTLSKDDPPFAETNAYEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH ++ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVKDHCSSIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G+ G+ YN+GG NE+ NI+IV + LLD L PK+ S+ I ++DRPGHDRRYAI Sbjct: 241 AGQPGQTYNVGGWNEKPNIEIVHTVCALLDELRPKADGSSYKNQITHVQDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DACKIERELGWKPAETFETGIRKTVQWYLDNPEW 334 >gi|170698775|ref|ZP_02889839.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria IOP40-10] gi|170136332|gb|EDT04596.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria IOP40-10] Length = 353 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 181/352 (51%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ + + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLRQSDEAVLNVDKLTYAGNLRTLQSLDGNPNHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E QP A+++FAAESHVDRSI G +F+ TN++GTF LLE R +W+ L++ Sbjct: 62 AALDALFGEHQPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARTYWNGLNEAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+ L Sbjct: 122 RSAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGMLTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE+KN+++V + LLD PK+ S+ + I ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNVGGWNEKKNLEVVHTLCDLLDQARPKAAGSYRDQITYVTDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E E+GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFETGLAKTVAWYLDNQVWVDEV-----ASGEYRKWVETN 348 >gi|307153971|ref|YP_003889355.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7822] gi|306984199|gb|ADN16080.1| dTDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 7822] Length = 354 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 240/342 (70%), Gaps = 7/342 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + N+ +V+V+D LTYAGN ++ + F F+Q +I Sbjct: 1 MTILITGGAGFIGSNFVHHWCNNYPNDRVIVLDALTYAGNRQNIAPLESLENFRFVQGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I S L+ D + +FAAESHVDRSILG D FI TN++GTF LL+ R +W+ Sbjct: 61 GDRSLIDSLLRAENVDTVAHFAAESHVDRSILGPDAFIQTNVVGTFTLLDSFRHYWT--E 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + +RFL +STDEVYGSL D F+E PY P+SPYSA+KA+SD+L A+ HTY + Sbjct: 119 KGSPENYRFLHVSTDEVYGSLGPDDPAFTETTPYAPNSPYSASKAASDHLARAYFHTYKV 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWL+V DH +AL +V+ Sbjct: 179 PTIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGQNIRDWLFVLDHCKALDIVI 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 KG+ GE YN+GGNNE KNID+V + L+D L P +LI F++DRPGHDRRYA Sbjct: 239 HKGQPGETYNVGGNNEVKNIDLVTLLCELMDELAPDLPVKPSKQLITFVKDRPGHDRRYA 298 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ID++KIK+E+GW P+ +E GL KT+ W+L+N WW+PL + Sbjct: 299 IDATKIKTELGWTPEVTVEEGLRKTIQWFLNNREWWQPLLSQ 340 >gi|126741093|ref|ZP_01756775.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6] gi|126717857|gb|EBA14577.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6] Length = 350 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 179/339 (52%), Positives = 233/339 (68%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + QV+ +D LTYA L ++ + +QS ++F++ DI Sbjct: 1 MKILVTGGAGFIGSAVVRLAIARGH-QVVNLDALTYAACLENVAQAAQSPNYAFVEADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +PD +++ AAESHVDRSI G +FI TNI GTF +LE R W + Sbjct: 60 DRAALDRVFSDHKPDVVMHLAAESHVDRSIDGPGDFIETNITGTFNMLEAARKHW--IEA 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + FRF ISTDEVYGSL F+E+ Y+P SPYSA+KA+SD+LV AW TYG+ Sbjct: 118 GRPEAFRFHHISTDEVYGSLPNDPEVQFTEETSYDPRSPYSASKAASDHLVRAWAETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVLL+NCSNNYGPYHFPEKLIP+ I + G + +YGDG NVRDWLYVEDH AL V+ Sbjct: 178 PVLLTNCSNNYGPYHFPEKLIPVVILNALAGKALPIYGDGSNVRDWLYVEDHADALLTVV 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 +G +G YNIGG NER N+++V + +LDA P+S S+ + I F+ DRPGHD RYA Sbjct: 238 SEGAVGRTYNIGGENERTNLELVETLCAILDAKRPRSDGKSYQDQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I+ E+GW P +E GL KTV WYLDN WWR L Sbjct: 298 IDPSRIRDELGWRPSVTVEEGLEKTVQWYLDNEAWWRAL 336 >gi|1073090|pir||B49906 rfbB homolog - Xanthomonas campestris pv. campestris Length = 351 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 178/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VT GAGFIG+ V+ I+V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTRGAGFIGANFVLEAVSR-GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ TV WYL N W Sbjct: 304 LKDELGWEPAYTFEQGIALTVDWYLTNQTW 333 >gi|56476695|ref|YP_158284.1| putative dTDP-D-glucose 4, 6-dehydratase [Aromatoleum aromaticum EbN1] gi|56312738|emb|CAI07383.1| putative dTDP-D-glucose 4, 6-dehydratase [Aromatoleum aromaticum EbN1] Length = 352 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 223/331 (67%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +D LTYAGN +L ++ F+ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLGQTDEPVVNLDALTYAGNRENLASLAGDARHVFVHGDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E P AIV+FAAESHVDRSI G F+ TN+ GTF LLE R +WS L D Sbjct: 62 ALLDRLLAEHHPRAIVHFAAESHVDRSIHGPAAFVRTNVEGTFTLLEAARAYWSGLDGDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL F+E + P+SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 122 KAMFRFLHVSTDEVYGSLGPADPAFTETKGFEPNSPYSASKAASDHLVRAWHHTYGLPVV 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQNVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCAAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDSS 299 R GE YN+GG NE+ N+DIV + LLD L P + H LI ++ DRPGHDRRYAID+ Sbjct: 242 RAGETYNVGGWNEKPNLDIVHTVCTLLDELRPDAAGPHARLITYVADRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E ESG+ KT+ WYL++ W Sbjct: 302 KIEHELGWRPVETFESGIRKTIAWYLEHQDW 332 >gi|302880022|ref|YP_003848586.1| dTDP-glucose 4,6-dehydratase [Gallionella capsiferriformans ES-2] gi|302582811|gb|ADL56822.1| dTDP-glucose 4,6-dehydratase [Gallionella capsiferriformans ES-2] Length = 371 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 184/351 (52%), Positives = 233/351 (66%), Gaps = 23/351 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG AGFIGS V+ +DKLTYAGNL +L ++ + +F+Q DI D Sbjct: 2 ILVTGSAGFIGSNFVLDWCALHDEPVMSLDKLTYAGNLENLASLNDNTRHTFVQGDIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L ++P A++NFAAESHVDRSI G ++FI TNI+GTF LLE R +W L+ + Sbjct: 62 ELVARLLAVYRPRAVINFAAESHVDRSIHGPEDFIQTNIVGTFHLLEAVRAYWGALNDSE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL D+ F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 KANFRFLHVSTDEVYGSLAKDEPAFTETHRYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+KG Sbjct: 182 TTNCSNNYGPYHFPEKLIPLLIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRCVLEKG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--------------------- 279 R+GE YN+GG NE+ N+DIV + LLD L P E Sbjct: 242 RLGEVYNVGGWNEKANLDIVHTVCDLLDELRPMKPGSGESSVVSGADLAVTHLPLSTYRS 301 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F+ DRPGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYLDN W Sbjct: 302 LITFVTDRPGHDRRYAIDARKIERELGWKPAETFETGIRKTVQWYLDNQGW 352 >gi|152986443|ref|YP_001351217.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa PA7] gi|150961601|gb|ABR83626.1| dTDP-glucose 4,6-dehydratase [Pseudomonas aeruginosa PA7] Length = 352 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 234/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ +S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGHSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|37522804|ref|NP_926181.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] gi|35213806|dbj|BAC91176.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] Length = 346 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/336 (53%), Positives = 238/336 (70%), Gaps = 8/336 (2%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y + + +V+V+DKLTYAGN +L+ + F+ DICD Sbjct: 4 LLVTGGAGFIGSNFVHYWFTHHPEDRVVVLDKLTYAGNRANLETLEGDPRLRFVAGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++S L+E + D +V+FAAESHVDRSI G + FI TNI GTF+LLE R +W +D Sbjct: 64 APRVQSLLEEERIDTVVHFAAESHVDRSIAGPEPFIETNIRGTFVLLEACRRYW----ED 119 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RFL +STDEVYG+L D F+E PY P+SPY+A+KA SD+LV A+ HTYG+PV Sbjct: 120 EASDCRFLHVSTDEVYGTLAPDDPPFTETTPYRPNSPYAASKAGSDHLVRAYYHTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGPY FPEKLIPL ITR +EG + +YGDGQ VRDWLYVEDH R + VL++ Sbjct: 180 LTTNCSNNYGPYQFPEKLIPLIITRALEGQSLPVYGDGQQVRDWLYVEDHCRGIKAVLER 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDS 298 G++GE YNIG NE++N++ V + +L ++ P ++ LI F+ DRPGHDRRYAID Sbjct: 240 GQLGETYNIGTRNEQRNLETVGLVCDILGSIYPERAEQFRSLITFVTDRPGHDRRYAIDP 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++I+ E+ W P EN E+GL KTV WY++N WW+ L Sbjct: 300 ARIERELDWRPVENFETGLRKTVEWYIENRAWWQAL 335 >gi|325276925|ref|ZP_08142612.1| dTDP-glucose 4,6-dehydratase [Pseudomonas sp. TJI-51] gi|324097940|gb|EGB96099.1| dTDP-glucose 4,6-dehydratase [Pseudomonas sp. TJI-51] Length = 366 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 181/360 (50%), Positives = 234/360 (65%), Gaps = 20/360 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + VL +D LTYAGNL +L+ ++ + F+Q +ICD Sbjct: 2 ILVTGGAGFIGSNFVLQWCAHNQEPVLNLDALTYAGNLANLQSLAGNEQHQFVQGNICDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R W+ L + Sbjct: 62 ALLAQLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAHWNSLEGAE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L + FSE PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGTLGPNDPAFSEATPYAPNSPYSASKAASDHLVRSYFHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 GE YNIGG NE+ NIDIV + LLD L P + + ELI ++ DR Sbjct: 242 AFGETYNIGGWNEKANIDIVHTLCSLLDELAPAASRQVINQKTGKPVEQYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W + + D Y W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVAWYLANQEWVKGVM-----DGSYRDW 356 >gi|167032392|ref|YP_001667623.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida GB-1] gi|166858880|gb|ABY97287.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida GB-1] Length = 356 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 176/334 (52%), Positives = 229/334 (68%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ + V+ +DKLTYAGNL +L+ + F+ DI Sbjct: 1 MTILVTGGAGFIGANFVLDWLAGSDEPVVNLDKLTYAGNLQTLRSLQGDKRHIFVHGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + LK QP AIVNFAAESHVDRSI G FI TN++GTF LLE R +W L+ Sbjct: 61 DSQLVAELLKAHQPRAIVNFAAESHVDRSIHGPQAFIETNVVGTFHLLEAVRAYWGGLNG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRFL +STDEVYGSL G F+E Y P+SPYSA+KA+SD+LV ++ HTYG+P Sbjct: 121 PARQAFRFLHVSTDEVYGSLTAGEPAFTETHQYQPNSPYSASKAASDHLVRSYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWL+V+DH A+ V++ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLFVKDHCSAIRRVME 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G+ GE YN+GG NE+ N++IV + LLD L P++ + E I ++ DRPGHDRRYAI Sbjct: 241 AGKAGEVYNVGGWNEKPNLEIVNRVCALLDELRPRTDGKPYAEQITYVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DARKLERELGWKPTETFETGIRKTVAWYLDNQEW 334 >gi|254425402|ref|ZP_05039120.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. PCC 7335] gi|196192891|gb|EDX87855.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. PCC 7335] Length = 343 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/338 (52%), Positives = 241/338 (71%), Gaps = 9/338 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R L + K IQ++V+D LTYAGN ++ ++ S+ F+ ++ DICD Sbjct: 5 VLVTGAAGFIGSNFVRLLYKNKKSIQIVVLDALTYAGNRANIADLEDSDRFTLVEGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+++ D +++FAAESHVDRSI G F+ TN++GTF LLE R W ++ Sbjct: 65 AQLVAKLLRDYAADTLIHFAAESHVDRSISGPAAFVQTNVVGTFTLLEAFRNHWE--AKG 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + FRFL +STDEV+GSLD G FSE PY P+SPYSA+KA SD+LV A+ HTYG+P Sbjct: 123 KPEHFRFLHVSTDEVFGSLDPGDPAFSETTPYAPNSPYSASKAGSDHLVRAYFHTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIPL ++ G + +YGDGQN+RDWL+VEDH A+ +L+K Sbjct: 183 LITNCSNNYGPYQFPEKLIPLMCLNILLGKPLPVYGDGQNIRDWLHVEDHCSAIATILQK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTELIRFIEDRPGHDRRYAI 296 G+ YNIGGNN+ KNIDIV ++ L+D L+ P S + +LI FI DRPGHDRRYA+ Sbjct: 243 AVPGDTYNIGGNNQVKNIDIVEQLCDLMDELVEALPVSPAR-QLITFIPDRPGHDRRYAM 301 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +KI+ E+GW P + +GL +TV WYL + WW+PL Sbjct: 302 DITKIQRELGWQPNYDFATGLRQTVQWYLAHRDWWQPL 339 >gi|289662632|ref|ZP_06484213.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 351 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 176/330 (53%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 64 LVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPAVRS 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+ER+NI++V I LLD P+ I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K E+GW P E G+ +TV WYL + W Sbjct: 304 LKKELGWEPAYTFEQGIAQTVEWYLSHQDW 333 >gi|221065024|ref|ZP_03541129.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni KF-1] gi|220710047|gb|EED65415.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni KF-1] Length = 356 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 179/332 (53%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + + V+ IDKLTYAGNL +L ++ F+Q DI D Sbjct: 2 IFVTGGAGFIGANFVLDWLAHVNEPVVNIDKLTYAGNLENLASLNGDARHVFVQADIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + QP A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +W L + Sbjct: 62 AKLAQLLAQHQPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRAYWHGLQGEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KSGFRFLHVSTDEVYGTLAPTDPAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLVIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NIDIV + LLD L P+S ++ E I ++ DRPGHDRRYAID+ Sbjct: 242 QLGETYNVGGWNEKANIDIVKTVCSLLDELRPRSDGKTYAEQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYL N W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLANPEW 333 >gi|91776360|ref|YP_546116.1| dTDP-glucose 4,6-dehydratase [Methylobacillus flagellatus KT] gi|91710347|gb|ABE50275.1| dTDP-glucose 4,6-dehydratase [Methylobacillus flagellatus KT] Length = 366 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 236/337 (70%), Gaps = 9/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IVTGGAGFIG V V+ +DKLTYAGNL +L +I + F+ DI DR Sbjct: 8 IIVTGGAGFIGGNFVLDWVKAGLGTVINLDKLTYAGNLENLADIEGNPNHIFVHGDIGDR 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL---- 118 + L E +P A++NFAAESHVDRSI G ++FI TN++GTF LLEE R +W+ + Sbjct: 68 ALVAKLLAEHKPRAVINFAAESHVDRSIHGPEDFIQTNVVGTFHLLEEVRAYWNSVVKTH 127 Query: 119 -SQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + QFRFL +STDEVYG+L F+E PY P+SPYSA+KA+SD+LV A+ HTY Sbjct: 128 PEEKENPQFRFLHVSTDEVYGTLGPKDQAFTETTPYAPNSPYSASKAASDHLVRAYHHTY 187 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PVL +NCSNNYGPYHFPEKLIPL + + G + +YGDGQ +RDWL+V+DH A+ Sbjct: 188 GLPVLTTNCSNNYGPYHFPEKLIPLCLLNALAGKPLPIYGDGQQIRDWLFVKDHCSAIRR 247 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRR 293 VL+ G++GE YN+GG NE+ N+D+V + +LD L PK+ S+ + I F++DRPGHDRR Sbjct: 248 VLEAGQLGETYNVGGWNEKANLDVVQTLCSILDELSPKADGSSYKDQITFVKDRPGHDRR 307 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAID+SK++ E+GW P E ESG+ KTV WYL N W Sbjct: 308 YAIDASKLERELGWKPAETFESGIRKTVEWYLQNQAW 344 >gi|114046905|ref|YP_737455.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] gi|113888347|gb|ABI42398.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] Length = 339 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 176/337 (52%), Positives = 235/337 (69%), Gaps = 9/337 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG+GFIGSAL R L+ VL IDKLTYA + ++L IS + F++ DIC Sbjct: 1 MRILVTGGSGFIGSALVRLLIQATNCHVLNIDKLTYASHPDALIGISNHPRYQFVKADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++F+P+ +++ AAE+HVDRSI G FI NI+GTF LLE R +W+ L Sbjct: 61 DGARLDILFEQFKPNIVMHLAAETHVDRSIEGPAAFIQNNILGTFTLLEAARRYWTQLDS 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K QFRF +STDEV+GSL D GLFSE Y+PSSPYSA+KAS+D+LV AW TYG+P+ Sbjct: 121 LQKLQFRFHHVSTDEVFGSLADTGLFSETSAYDPSSPYSASKASTDHLVRAWHRTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGP+ +PEKLIPL + ++G + +YG+GQ VRDWLYV+DHV+ALYLV + Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVNHALQGKSLPIYGNGQQVRDWLYVDDHVKALYLVATR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--------KSYSHTELIRFIEDRPGHD 291 G++G+ YNIGG ER N+ +V +I LL+ L+P K LI + DRPGHD Sbjct: 241 GQLGQTYNIGGCCERTNLAVVQQICLLLEELVPTHPQSLAMKGDGFAALIEHVVDRPGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 RYAIDSSKI+ E+GW P E+ ESGL + V W + Sbjct: 301 IRYAIDSSKIQHELGWQPLESFESGLRRAVEWMISQQ 337 >gi|149203263|ref|ZP_01880233.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. TM1035] gi|149143096|gb|EDM31135.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. TM1035] Length = 349 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 177/339 (52%), Positives = 234/339 (69%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL++TGGAGFIGSA+ R V + V+ +D LTYA L ++ ++QS L+SF+ DI Sbjct: 1 MRLLITGGAGFIGSAVVRLAVARGHV-VINLDALTYAACLENVASVAQSPLYSFVHADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + PDA+++ AAESHVDRSI G F+ TNI GT+ LLE R +W ++ Sbjct: 60 DRAALDRVFATHAPDAVLHLAAESHVDRSIDGPGTFVETNITGTYNLLEAARGYWQ--AR 117 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K + FRF ISTDEVYGSL + F+ED PY+P SPYSA+KA+SD+LV AW TYG+ Sbjct: 118 NKPEGFRFQHISTDEVYGSLPSDPRIKFTEDTPYDPRSPYSASKAASDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+L++NCSNNYGP+HFPEKLIP+ I + G + +YGDG NVRDWLYVEDH AL VL Sbjct: 178 PILITNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGSNVRDWLYVEDHAEALLTVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 ++G G YNIGG NE N+D+V ++ +LD L P+ S+ I F+ DRPGHD RYA Sbjct: 238 ERGVPGRSYNIGGENELSNLDLVRKLCAVLDELAPRDDGLSYAAQISFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID ++I+ E+GW P ++ G+ +TV WYL+N WWR L Sbjct: 298 IDPTRIRGELGWRPSVTVDEGVRRTVRWYLENEAWWRAL 336 >gi|63054924|gb|AAY29001.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia] Length = 363 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 177/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNL +L + + F+ DI DR Sbjct: 17 LVTGGAGFIGGNFVLEAVA-RGVRVVNLDALTYAGNLKTLAPLDGNPDHLFVHGDIGDRA 75 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L + QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L DK Sbjct: 76 FVAQLLADHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLESVRDYWKALPADKG 135 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYG+L + G FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 136 AAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 195 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 196 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGQV 255 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH--TELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+E++NI++V I LLDA P+ + I ++ DRPGHDRRYAID+SK Sbjct: 256 GETYNVGGNSEKENIEVVHAICALLDARRPREDGQLRSSQITYVADRPGHDRRYAIDASK 315 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K ++GW P+ + G+ TV WYLDN W Sbjct: 316 LKDQLGWEPKYTFDQGIAFTVDWYLDNQEW 345 >gi|99077994|ref|YP_611253.1| dTDP-glucose 4,6-dehydratase [Ruegeria sp. TM1040] gi|99034937|gb|ABF61991.1| dTDP-glucose 4,6-dehydratase [Ruegeria sp. TM1040] Length = 350 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 180/339 (53%), Positives = 237/339 (69%), Gaps = 8/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + +V+ +D LTYA L+++ +++S + F + DI Sbjct: 1 MKILVTGGAGFIGSAVVRQAIA-AGHEVVNLDALTYAACLDNVASVAESPSYVFEEADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E PDA+++ AAESHVDRSI G +FI TN+ GTF +LE R +W ++ Sbjct: 60 DRAALDRIFAEHAPDAVMHLAAESHVDRSIDGPGDFIETNVTGTFNMLEAARKFW--IAV 117 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K +FRF ISTDEVYGSL DK +F+E+ Y+P SPYSA+KASSD+LV AW TYG+ Sbjct: 118 GKPARFRFHHISTDEVYGSLPTDKSVMFTEETAYDPRSPYSASKASSDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGP+HFPEKLIP+ I + G + +YGDG N+RDWLYVEDH AL LVL Sbjct: 178 PVVLTNCSNNYGPFHFPEKLIPVVILNALAGKALPIYGDGSNIRDWLYVEDHADALLLVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 +KG G YN+GG NER N+++V + +LD P+ S+ E I F+ DRPGHD RYA Sbjct: 238 QKGENGRSYNVGGENERTNLELVETLCAILDDKRPREDGTSYKEQITFVTDRPGHDARYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID S+I++E+GW P +E GL KTV WYLDN WWR L Sbjct: 298 IDPSRIRTELGWRPSVTVEEGLAKTVQWYLDNEDWWRAL 336 >gi|218894261|ref|YP_002443131.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa LESB58] gi|218774490|emb|CAW30307.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa LESB58] Length = 352 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 234/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGNARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|288573527|ref|ZP_06391884.1| dTDP-glucose 4,6-dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569268|gb|EFC90825.1| dTDP-glucose 4,6-dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 351 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 181/332 (54%), Positives = 232/332 (69%), Gaps = 3/332 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAGFIGS L LV + V V+D LTYAGNL SL ++ + + F++ DI Sbjct: 1 MNYLITGGAGFIGSNLVHLLV-EQGHNVTVLDFLTYAGNLYSLADLEGKDNYFFIKGDIG 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + I N AAESHVDRSI G EFI TN++GTF+LLE R +W+ LS Sbjct: 60 DGPLVSHILTDRGIHGIFNLAAESHVDRSIDGPAEFIKTNVMGTFVLLEAVRAYWNGLST 119 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K FRFL +STDEVYGSL D GLF+E Y P+SPYSA+KASSD+LV A+ HTYG+P Sbjct: 120 EDKGAFRFLHVSTDEVYGSLGDSGLFTETTAYAPNSPYSASKASSDHLVRAYHHTYGLPT 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPY FPEKLIPL I + G + +YGDG N+RDWLYV DH +AL + K Sbjct: 180 VTTNCSNNYGPYQFPEKLIPLVIHNALAGKDLPIYGDGSNIRDWLYVMDHCKALAAAMGK 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN+GGN+ER N+ IV + LLD+ PK+ S+ + I F++DRPGHD+RYAID+ Sbjct: 240 GIPGETYNVGGNSERTNLQIVHTLCDLLDSKRPKADGSYRDQITFVKDRPGHDKRYAIDA 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKIK ++GW P+E +G+ KTV WYL+N W Sbjct: 300 SKIKEQLGWTPEETFNTGMEKTVNWYLNNQDW 331 >gi|254243958|ref|ZP_04937280.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa 2192] gi|126197336|gb|EAZ61399.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa 2192] Length = 352 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPMPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|264678897|ref|YP_003278804.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni CNB-2] gi|262209410|gb|ACY33508.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni CNB-2] Length = 356 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 178/332 (53%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + + V+ IDKLTYAGNL +L + F+Q DI D Sbjct: 2 IFVTGGAGFIGANFVLDWLAHVNEPVVNIDKLTYAGNLENLASLKGDARHVFVQADIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + QP A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +W+ L + Sbjct: 62 AQLAQLLAQHQPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRAYWNGLEGEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KSGFRFLHVSTDEVYGTLAPTDPAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLVIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NIDIV + LLD L P++ ++ E I ++ DRPGHDRRYAID+ Sbjct: 242 QLGETYNVGGWNEKANIDIVKTVCSLLDELRPRADGKAYAEQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYL N W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLANPEW 333 >gi|190572699|ref|YP_001970544.1| putative dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia K279a] gi|190010621|emb|CAQ44230.1| putative dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia K279a] Length = 351 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNL +L + + F+Q DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVKVINLDALTYAGNLKTLSSLDGNPNHVFVQGDIGDSA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPTEQG 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYG+L + G FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 AAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGQV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+E++NI++V I LLD P++ + I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+++GW P E G+ TV WYLDN W Sbjct: 304 LKNDLGWEPAYTFEQGITFTVDWYLDNQEW 333 >gi|15600354|ref|NP_253848.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa PAO1] gi|116053308|ref|YP_793632.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa UCBPP-PA14] gi|254238139|ref|ZP_04931462.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa C3719] gi|296392016|ref|ZP_06881491.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa PAb1] gi|313110224|ref|ZP_07796120.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa 39016] gi|9951463|gb|AAG08546.1|AE004929_1 dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa PAO1] gi|27262968|emb|CAC82202.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa] gi|115588529|gb|ABJ14544.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170070|gb|EAZ55581.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa C3719] gi|310882622|gb|EFQ41216.1| dTDP-D-glucose 4,6-dehydratase [Pseudomonas aeruginosa 39016] Length = 352 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|239813761|ref|YP_002942671.1| dTDP-glucose 4,6-dehydratase [Variovorax paradoxus S110] gi|239800338|gb|ACS17405.1| dTDP-glucose 4,6-dehydratase [Variovorax paradoxus S110] Length = 360 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 231/334 (69%), Gaps = 4/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL +L + F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEPVVNLDKLTYAGNLETLASLKGDPRHIFVQGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AIVNFAAESHVDRSI G ++F+ TN++GTF LLE R WS L ++ Sbjct: 62 ALVDRLLAEHKPRAIVNFAAESHVDRSIHGPEDFVQTNVLGTFRLLESVRGHWSALPAEQ 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL K F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KTAFRFLHVSTDEVYGSLSKTDPAFTEENKYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDG VRDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ NI+IV + LLD L P++ + E I ++ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEKPNIEIVNTVCALLDELRPRADGKPYKEQISYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K++ E+GW P E +SG+ KTV WYL + W R Sbjct: 302 RKLERELGWKPAETFDSGIRKTVEWYLAHGEWVR 335 >gi|49086616|gb|AAT51367.1| PA5161 [synthetic construct] Length = 353 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|17940026|gb|AAL49433.1|AF316500_20 RmlB [Leptospira interrogans] Length = 349 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 183/351 (52%), Positives = 249/351 (70%), Gaps = 11/351 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS +++D K QV+V DKLTYAGNL SL+ + + F F++ DI Sbjct: 3 KILVTGGAGFIGSNFVNLILSDTKEYQVVVFDKLTYAGNLRSLESWKKDSRFIFVKADIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + S +E + + I +FAAESHVDRSI G +EFI TN++GTF LL+ RL W+ + Sbjct: 63 NKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAARLQWNGSYE 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FL +STDEV+G+L D G F+E+ PY P+SPYSA+KASSD++V ++ HTY +PV Sbjct: 123 GKK----FLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTYHMPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I ++G + +YGDG+N+RDWLYV+DH AL + L + Sbjct: 179 VTTNCSNNYGPYHFPEKLIPLMILNCLQGKPLPVYGDGKNIRDWLYVKDHCEALRVALFQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG NE+KNIDIV I ++ L P H++LI++++D+PG D RYAID S Sbjct: 239 GLPGETYNIGTRNEKKNIDIVDSICSIMGELHPSGAPHSKLIQYVKDKPGPDFRYAIDPS 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKPDNDYSK 346 KI+ E+GW P+ ES L +TV WYL+N WW+ + YKE +N Y K Sbjct: 299 KIEKELGWKPKFAFESALKETVRWYLENESWWKEILSGQYKEYY-ENQYEK 348 >gi|113474758|ref|YP_720819.1| dTDP-glucose 4,6-dehydratase [Trichodesmium erythraeum IMS101] gi|110165806|gb|ABG50346.1| dTDP-glucose 4,6-dehydratase [Trichodesmium erythraeum IMS101] Length = 357 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 236/342 (69%), Gaps = 7/342 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL++TGGAGFIGS Y +V+V+D LTYAGN +L ++ + F F+Q DIC Sbjct: 4 RLLITGGAGFIGSNFTHYWCQTYPNHRVVVLDALTYAGNKKTLADLQDRSNFRFVQGDIC 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S L+E D + + AAESHVDRSILG F+ TN++GTF LLE R + L+Q Sbjct: 64 DRSLVDSLLQEEDIDTVAHLAAESHVDRSILGPAAFVQTNVVGTFTLLEAFRSHYQTLAQ 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + FL +STDEVYGSL F+E PY+P+SPYSA+KA SD+ A+ HTYG+P Sbjct: 124 NPDRKCIFLHVSTDEVYGSLSPQELAFTETTPYSPNSPYSASKAGSDHFARAYYHTYGVP 183 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL ++ G + +YGDGQN+RDWLYV DH RAL V+ Sbjct: 184 TIITNCSNNYGPYHFPEKLIPLMCINILLGKELPVYGDGQNIRDWLYVIDHCRALDTVIH 243 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSHTELIRFIEDRPGHDRRYA 295 KG+ G+ YN+GGNNE KNI++V + ++D L +P +LI F++DRPGHDRRYA Sbjct: 244 KGKPGQTYNVGGNNEVKNINLVQMLCQIMDELANDLPVKPCE-KLITFVKDRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ID++KIK+E+GW P +E GL +TV W+L+N WW PL E Sbjct: 303 IDATKIKTELGWQPSVTVEEGLRQTVKWFLNNRDWWEPLLSE 344 >gi|187927736|ref|YP_001898223.1| dTDP-glucose 4,6-dehydratase [Ralstonia pickettii 12J] gi|187724626|gb|ACD25791.1| dTDP-glucose 4,6-dehydratase [Ralstonia pickettii 12J] Length = 353 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 176/331 (53%), Positives = 227/331 (68%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIG+ + V+ +DKLTYAGNL +L + +F++ DICDR Sbjct: 2 ILITGGAGFIGANFVLDWLRGSDEPVVNVDKLTYAGNLKTLASLEGDARHTFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L P AIV+FAAESHVDRSI G +F+ TN+ GTF LLE R +W+ L Sbjct: 62 ASMDELLTRHAPRAIVHFAAESHVDRSIHGPADFVQTNVFGTFTLLEAARAYWNRLEGAA 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF +STDEVYGSL D F+E PY P+SPYSA+KA SD+LV A+ HTYG+PVL Sbjct: 122 RANFRFHHVSTDEVYGSLGPDDAPFTETTPYAPNSPYSASKAGSDHLVRAYFHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG NVRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIANALAGKPLPVYGDGLNVRDWLYVGDHCAAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 +GE YN+GG NE+ N+++V + LLD L P+++ S+ E I F+ DRPGHDRRYAID+ Sbjct: 242 TVGEVYNVGGWNEKNNLEVVHTLCDLLDTLKPRAHGSYREQITFVRDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+ W P E E+GL KTV WYL+N W Sbjct: 302 KLERELNWKPAETFETGLRKTVEWYLENQEW 332 >gi|78049265|ref|YP_365440.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037695|emb|CAJ25440.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 351 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 175/330 (53%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V+ ++V+ +D LTYAGNLN+L + + F++ DI D Sbjct: 5 LVTGGAGFIGGNFVLEAVSR-GVRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIGDGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E +PDA++NFAAESHVDRSI G FI TN++GT LLE R +W L + Sbjct: 64 LVTRLLQEHRPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLALLEAVRDYWKALPDASR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 DAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL GR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLGNGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 G+ YN+GGN+ER+NI++V I LLD P+ I + DRPGHDRRYAID+SK Sbjct: 244 GQTYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRASQITHVTDRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P E G+ +TV WYL N W Sbjct: 304 LKNELGWEPAYTFEQGIAQTVEWYLGNQAW 333 >gi|83309157|ref|YP_419421.1| dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magneticum AMB-1] gi|82943998|dbj|BAE48862.1| dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magneticum AMB-1] Length = 372 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 178/332 (53%), Positives = 232/332 (69%), Gaps = 4/332 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSAL L+ VL DKLTYAG+L +L SF+Q DI + Sbjct: 11 RVLVTGGAGFIGSALVGQLLASGH-SVLTFDKLTYAGHLANLDGWLDHPNHSFVQGDIAE 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +++FQP I++ AAESHVDRSI A EF+ TN+IGTF +LE + L Sbjct: 70 RAQVEAVVEQFQPTTIMHLAAESHVDRSIASAGEFVRTNVIGTFTMLEAAAAHRARLDGA 129 Query: 122 KKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++FRFL +STDEV+GSL F E+ Y P+SPYSATKA+SD+L AW HTYG+PVL Sbjct: 130 ARERFRFLHVSTDEVFGSLGPDEAFDENSRYQPNSPYSATKAASDHLARAWSHTYGLPVL 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I +EG + +YGDG VRDWL+VEDH RAL ++++G Sbjct: 190 VSNCSNNYGPRQFPEKLIPLMILNAVEGKPLPVYGDGCQVRDWLHVEDHARALATIVERG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R GE Y +GG +ER N+++V + LLD L P++ SH ELIR + DRPGHDRRYA++ Sbjct: 250 RPGEVYCVGGESERTNMEVVHTLCALLDGLRPRAEGRSHAELIRHVTDRPGHDRRYAMNI 309 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++I++E+ W P+E ESGL KTV WYL N W Sbjct: 310 ARIRAELDWKPRETFESGLAKTVEWYLANGAW 341 >gi|318042925|ref|ZP_07974881.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CB0101] Length = 362 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 176/336 (52%), Positives = 231/336 (68%), Gaps = 10/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R L+ D +V +DKL YA +L S+ + + + F+QVD+ D Sbjct: 11 RVLVTGGAGFIGSAVVRRLLADSSAEVFNLDKLGYASDLTSIGDHPRHH---FIQVDLAD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A++ PD +++ AAESHVDRSI G FI +N+ GTF LL+ R W L Sbjct: 68 PQATAEAVRAADPDLVMHLAAESHVDRSIDGPAAFIESNVSGTFNLLQAVRAHWEQLPAA 127 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++++FRF ISTDEV+GSL G FSE PY+P SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 128 RRERFRFHHISTDEVFGSLGPTGRFSETTPYDPRSPYSASKAASDHLVSAWHHTYGLPVV 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGP+ FPEKLIP+ I + + G + LYGDG NVRDWLYVEDHV AL L +G Sbjct: 188 LTNCSNNYGPWQFPEKLIPVVILKAVAGEPIPLYGDGANVRDWLYVEDHVEALLLAATRG 247 Query: 241 RIGERYNIGGN------NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 R+GE Y +GG +ER N D+V I L+D L P+ H LI + DRPGHDRRY Sbjct: 248 RLGESYCVGGAGDHGSPSERTNRDVVDTICTLMDQLRPEGAPHARLITRVSDRPGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KI +E+GW P+ + E GL TV WYL++ W Sbjct: 308 AIDAAKISTELGWTPRHSFEQGLEATVRWYLEHLDW 343 >gi|264680364|ref|YP_003280274.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni CNB-2] gi|262210880|gb|ACY34978.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni CNB-2] Length = 356 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 177/332 (53%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + + V+ IDKLTYAGNL +L + F+Q DI D Sbjct: 2 IFVTGGAGFIGANFVLDWLAHVNEPVVNIDKLTYAGNLENLASLKGDARHVFVQADIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + QP A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +W+ L + Sbjct: 62 AQLAQLLAQHQPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRAYWNGLEGEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 QSGFRFLHVSTDEVYGTLAPTDPAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLVIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE+ NIDIV + LLD L P++ ++ E I ++ DRPGHDRRYAID+ Sbjct: 242 QLGETYNVGGWNEKANIDIVKTVCSLLDELRPRADGKAYAEQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYL N W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLANPEW 333 >gi|241662191|ref|YP_002980551.1| dTDP-glucose 4,6-dehydratase [Ralstonia pickettii 12D] gi|240864218|gb|ACS61879.1| dTDP-glucose 4,6-dehydratase [Ralstonia pickettii 12D] Length = 354 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 174/332 (52%), Positives = 230/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ +L +D V+ +DKLTYAGNL SL + F Q DICD Sbjct: 4 IVVTGGAGFIGANFVLDWLRDDHADAVINVDKLTYAGNLKSLASLQGDPRHIFSQADICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++P A+V+FAAESHVDRS+ +F+ TN++GTF LLE R +W L Sbjct: 64 RAALDRMFVDYRPRAVVHFAAESHVDRSVRAPADFVQTNVVGTFTLLESARNYWGTLDAT 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF--SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRF+ +STDEV+GSL +G SE P+ P+SPYSATKA+SD+L A+ HTYG+P+ Sbjct: 124 ARAAFRFVHVSTDEVFGSLAEGELPVSEAAPHAPNSPYSATKAASDHLARAYYHTYGLPI 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + ++CSNNYGPY FPEKLIPL I + G + LYGDG +VRDWLYV D AL VL + Sbjct: 184 VTTHCSNNYGPYQFPEKLIPLMIVNALAGKPLPLYGDGLHVRDWLYVGDCCSALRSVLAR 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG NER N+D+V+ + LD L+PK S S+ + + F+ DRPGHDRRYA+D+ Sbjct: 244 GRVGEAYNVGGWNERTNLDVVYTLCDSLDVLVPKTSGSYRDQVTFVADRPGHDRRYAVDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++SE+GW + ESGL KTV WYLDN W Sbjct: 304 HKLQSELGWVSSQTFESGLRKTVQWYLDNQAW 335 >gi|134294917|ref|YP_001118652.1| dTDP-glucose 4,6-dehydratase [Burkholderia vietnamiensis G4] gi|134138074|gb|ABO53817.1| dTDP-glucose 4,6-dehydratase [Burkholderia vietnamiensis G4] Length = 353 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 181/352 (51%), Positives = 236/352 (67%), Gaps = 8/352 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL +L+ ++ + F++VDICDR Sbjct: 2 ILVTGGAGFIGANFVIDWLRQSDEAVLNVDKLTYAGNLRTLQSLNGNPKHVFVRVDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L +P AI++FAAESHVDRSI G EF+ TN++GTF LLE R +WS L + Sbjct: 62 AALDALLAAHRPRAILHFAAESHVDRSIHGPAEFVQTNVVGTFTLLEAARQYWSALPGAE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL FSE PY P+SPYSATKA SD+LV A+ HTYG+P L Sbjct: 122 QAGFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDGQN+RDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNIRDWLYVGDHCSAIREVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 GE YN+GG NE N+D+V + LLD P++ ++ + I +++DRPGHDRRYAID+ Sbjct: 242 TPGETYNVGGWNEMTNLDVVHTLCDLLDDARPRAQGTYRDHITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 K++ E+GW P E +GL KTV WYLDN W + +Y KW N Sbjct: 302 KLERELGWKPAETFATGLAKTVAWYLDNQAW-----SDEVASGEYRKWVETN 348 >gi|294788797|ref|ZP_06754038.1| dTDP-glucose 4,6-dehydratase [Simonsiella muelleri ATCC 29453] gi|294483279|gb|EFG30965.1| dTDP-glucose 4,6-dehydratase [Simonsiella muelleri ATCC 29453] Length = 353 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 242/336 (72%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ND + V+ +DKLTYAGNL++L +S S ++F QVDIC Sbjct: 5 MKILVTGGAGFIGSAVVRHIINDTQDSVVNVDKLTYAGNLDNLASVSGSTRYAFEQVDIC 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QP+A+++ AAESHVDRSI A EFI TNIIGTF LLE R +W + Sbjct: 65 NRAELDRVFTQHQPNAVMHLAAESHVDRSINSAGEFIQTNIIGTFTLLEAARQYWQTMPP 124 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K+ F+F ISTDEVYG L LF+E PY+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 EKQAAFKFHHISTDEVYGDLHGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTYGLP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYG YHFPEKLIPL I + G + +YG+G +RDWL+VEDH RALY V+ Sbjct: 185 TIVTNCSNNYGCYHFPEKLIPLMILNALAGKPLPVYGNGLQIRDWLFVEDHARALYQVIT 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 G+IGE YNIGG NE+ NID+V +I LL+ L+P + +LI + DR GHD RY Sbjct: 245 HGKIGETYNIGGFNEKTNIDVVKKICELLEELVPNKPQGVNQYVDLITHVTDRAGHDVRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+ KI+ E+GW PQE ESG+ KTV WYL N W Sbjct: 305 AIDARKIERELGWKPQETFESGIRKTVEWYLANRDW 340 >gi|319761361|ref|YP_004125298.1| dtdp-glucose 4,6-dehydratase [Alicycliphilus denitrificans BC] gi|330823236|ref|YP_004386539.1| dTDP-glucose 4,6-dehydratase [Alicycliphilus denitrificans K601] gi|317115922|gb|ADU98410.1| dTDP-glucose 4,6-dehydratase [Alicycliphilus denitrificans BC] gi|329308608|gb|AEB83023.1| dTDP-glucose 4,6-dehydratase [Alicycliphilus denitrificans K601] Length = 353 Score = 361 bits (927), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 230/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL++L +S F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAGSDEPVVNLDKLTYAGNLHNLDGLSGDARHLFVQGDIGDG 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L +P AIVNFAAESHVDRSI G ++FI TN++GTF LLE R +W LS + Sbjct: 62 ALVSRLLAGHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEVVRHYWQALSATE 121 Query: 123 KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGTLAPSAPAFTEAHGYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKSLPVYGDGMQVRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ NI+IV + LLD L P++ S+ I +++DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEKPNIEIVKTVCALLDELRPRADGQSYATQITYVQDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+ W P E E+G+ KTV WYLDN W Sbjct: 302 RKIERELAWRPAETFETGIRKTVQWYLDNPQW 333 >gi|284052273|ref|ZP_06382483.1| dTDP-glucose 4,6-dehydratase [Arthrospira platensis str. Paraca] Length = 391 Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 180/343 (52%), Positives = 237/343 (69%), Gaps = 10/343 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGS + N + +++V+D LTYAGN +L + F F++ +IC Sbjct: 41 RVLVTGGAGFIGSNFVHHWCNAYPEDRIVVLDALTYAGNRQNLAPLEHQEQFKFVEGNIC 100 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L+E D I +FAAESHVDRSILG D FI TN++GT LLE R +W+ Sbjct: 101 DRTLIDKLLEEEAIDTIAHFAAESHVDRSILGPDAFIQTNVVGTLTLLEAFRHYWN--HH 158 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+LV A+ HTY +P Sbjct: 159 QQPENYRFLHVSTDEVYGSLGPDDPAFTETTPYAPNSPYSASKAGSDHLVRAYYHTYNLP 218 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYH+PEKLIPL ++ G + +YGDGQNVRDWLYV DH RAL +V+ Sbjct: 219 TIITNCSNNYGPYHYPEKLIPLMCINILLGKPLPIYGDGQNVRDWLYVLDHCRALDVVIH 278 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL----IPKSYSHTELIRFIEDRPGHDRRY 294 +G+ GE YNIGGNNE NID+V + +D L +P S +LI F++DRPGHDRRY Sbjct: 279 RGKPGETYNIGGNNEVANIDLVKMLCRFMDELASHHLPVKPS-MDLITFVKDRPGHDRRY 337 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 AI+SSK+K+++GW P +E GL +TV WYL + WW PL + Sbjct: 338 AINSSKLKTQLGWAPLVTVEEGLRQTVGWYLTHRHWWEPLLSQ 380 >gi|260581701|ref|ZP_05849498.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae NT127] gi|260095294|gb|EEW79185.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae NT127] Length = 334 Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 183/334 (54%), Positives = 244/334 (73%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWHTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E Y+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSSYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VEDHV+ALYLVL Sbjct: 181 VIITNSSNNYGAYQHPEKLIPLVISNALMGKPLPIYGDGQQIRDWLFVEDHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----ELIRFIEDRPGHDRRY 294 KGR+G YNIGGN E+ N+++V I LL+ L P +H +LI F++DRPGHD RY Sbjct: 241 KGRVGGNYNIGGNCEKTNLEVVKTICQLLEELAPNKPNHIKYYEDLITFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++D SKI E+GW PQ E GL++TV WYL N+ Sbjct: 301 SLDCSKIHVELGWQPQITFEQGLSQTVQWYLFNS 334 >gi|291571411|dbj|BAI93683.1| dTDP-glucose 4,6-dehydratase [Arthrospira platensis NIES-39] Length = 367 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 180/343 (52%), Positives = 237/343 (69%), Gaps = 10/343 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGS + N + +++V+D LTYAGN +L + F F++ +IC Sbjct: 17 RVLVTGGAGFIGSNFVHHWCNAYPEDRIVVLDALTYAGNRQNLAPLEHQEQFKFVEGNIC 76 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L+E D I +FAAESHVDRSILG D FI TN++GT LLE R +W+ Sbjct: 77 DRTLIDKLLEEEAIDTIAHFAAESHVDRSILGPDAFIQTNVVGTLTLLEAFRHYWN--HH 134 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+LV A+ HTY +P Sbjct: 135 QQPENYRFLHVSTDEVYGSLGPDDPAFTETTPYAPNSPYSASKAGSDHLVRAYYHTYNLP 194 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYH+PEKLIPL ++ G + +YGDGQNVRDWLYV DH RAL +V+ Sbjct: 195 TIITNCSNNYGPYHYPEKLIPLMCINILLGKPLPIYGDGQNVRDWLYVLDHCRALDVVIH 254 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL----IPKSYSHTELIRFIEDRPGHDRRY 294 +G+ GE YNIGGNNE NID+V + +D L +P S +LI F++DRPGHDRRY Sbjct: 255 RGKPGETYNIGGNNEVANIDLVKMLCRFMDELASHHLPVKPS-MDLITFVKDRPGHDRRY 313 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 AI+SSK+K+++GW P +E GL +TV WYL + WW PL + Sbjct: 314 AINSSKLKTQLGWAPLVTVEEGLRQTVGWYLTHRHWWEPLLSQ 356 >gi|194364281|ref|YP_002026891.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia R551-3] gi|194347085|gb|ACF50208.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia R551-3] Length = 351 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 177/330 (53%), Positives = 230/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNL +L + + F+Q DI DRE Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVKVINLDVLTYAGNLKTLSSLDGNPNHLFVQGDIGDRE 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L E +PDA++NFAAESHVDRSI FI TN++GT LLE R +W L ++ Sbjct: 64 LVTRLLAEHRPDAVLNFAAESHVDRSIDVPGAFIQTNVVGTLGLLEAVRDYWKALPAEQG 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYG+L + G FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 ADFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KG++ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGQV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN+E++NI++V I LLDA P+ + I ++ DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNSEKQNIEVVQAICALLDARRPREDGQPRSSQITYVADRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+++GW P E G+ TV WYLDN W Sbjct: 304 LKNDLGWEPAYTFEQGITFTVDWYLDNQEW 333 >gi|116749694|ref|YP_846381.1| dTDP-glucose 4,6-dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116698758|gb|ABK17946.1| dTDP-glucose 4,6-dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 355 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 176/332 (53%), Positives = 233/332 (70%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS ++ ++V+ +D LTYAGN +L + + + F++ DI D Sbjct: 4 ILVTGGAGFIGSGYVLRQLDLSDVRVVNLDLLTYAGNPANLAAVEKHPRYVFIRGDIGDA 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R+ L E++P A++NFAAESHVDRSI G F+ TN+IG F LLEE R +W L + Sbjct: 64 DLVRAVLNEYRPAAVLNFAAESHVDRSIAGPAAFMQTNVIGVFRLLEEVRRYWEQLHGEM 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL D+ F E PY P+SPYSA+KA+ D+LV A+ HTYG+PVL Sbjct: 124 SESFRFLHVSTDEVYGSLGPDEPPFHEATPYAPNSPYSASKAAGDHLVRAYHHTYGLPVL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP FPEKLIPL I +EG + +YGDG NVRDW++V+DH A+ +VL G Sbjct: 184 TTNCSNNYGPRQFPEKLIPLMILNGLEGKPLPVYGDGLNVRDWIFVDDHCAAVEMVLNNG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YNIGG ++ N+++V + +LD + S H IRF+ DRPGHDRRYA+DS Sbjct: 244 RVGETYNIGGGCQKTNLEVVRAVCDILDEVRGDSPFVPHASQIRFVGDRPGHDRRYAVDS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI+ E+GW P E+ ESGL KTV WYLDN W Sbjct: 304 SKIERELGWGPMESFESGLRKTVRWYLDNPSW 335 >gi|310817082|ref|YP_003965046.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] gi|308755817|gb|ADO43746.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] Length = 349 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 174/338 (51%), Positives = 235/338 (69%), Gaps = 7/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R V V+ +D LTYA L+++ ++ S L++F Q DI Sbjct: 1 MKILITGGAGFIGSAVVRQAVA-AGHHVVNLDALTYAACLDNVASVADSPLYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + PDA+++ AAESHVDRSI G F+ TN++GT+ LL+ R +W + Sbjct: 60 DAAALEAVFARHAPDAVMHLAAESHVDRSIDGPGAFVETNVMGTYTLLQAARAYWE--GR 117 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + FRF ISTDEV+GSL D + F+ED PY+P SPYSA+KA+SD+LV AW TYG+ Sbjct: 118 GKPEGFRFHHISTDEVFGSLPHDPAVKFTEDTPYDPRSPYSASKAASDHLVRAWHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+L+NCSNNYGP+HFPEKLIP+ I + G + +YGDG N+RDWLYVEDH AL VL Sbjct: 178 PVVLTNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGSNIRDWLYVEDHATALLTVL 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAI 296 +KG++G YNIGG NER N+++V + +LD PK S S+ + I F+ DRPGHD RYAI Sbjct: 238 EKGKLGRSYNIGGENERTNLELVQTLCAILDEKQPKTSGSYADQITFVTDRPGHDARYAI 297 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + +I++E+GW P +E GL TV WYL N WW+PL Sbjct: 298 EPERIRTELGWRPSVTVEQGLALTVDWYLANESWWQPL 335 >gi|107104262|ref|ZP_01368180.1| hypothetical protein PaerPA_01005336 [Pseudomonas aeruginosa PACS2] Length = 352 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 176/334 (52%), Positives = 233/334 (69%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ + V+ +DKLTYAGN +L + +F+ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L + QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLEE R +W L Sbjct: 61 DSQLVARLLADHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P++ S+ E I F++DRPGHDRRYAI Sbjct: 241 AGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++++ E+GW P E E+G+ KTV WYLDN W Sbjct: 301 DATRLERELGWKPAETFETGIRKTVRWYLDNQDW 334 >gi|209523314|ref|ZP_03271870.1| dTDP-glucose 4,6-dehydratase [Arthrospira maxima CS-328] gi|209496465|gb|EDZ96764.1| dTDP-glucose 4,6-dehydratase [Arthrospira maxima CS-328] Length = 367 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 180/343 (52%), Positives = 237/343 (69%), Gaps = 10/343 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGS + N + +++V+D LTYAGN +L + F F++ +IC Sbjct: 17 RVLVTGGAGFIGSNFVHHWCNAYPEDRIVVLDALTYAGNRQNLATLEDREQFKFVEGNIC 76 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L+E D I +FAAESHVDRSILG D FI TN++GT LLE R +W+ Sbjct: 77 DRTLIDKLLEEEAIDTIAHFAAESHVDRSILGPDAFIQTNVVGTLTLLEAFRHYWN--QH 134 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D +RFL +STDEVYGSL + F+E PY P+SPYSA+KA SD+LV A+ HTY +P Sbjct: 135 QQPDHYRFLHVSTDEVYGSLGPEDPPFTETTPYTPNSPYSASKAGSDHLVRAYYHTYNLP 194 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYH+PEKLIPL ++ G + +YGDGQNVRDWLYV DH RAL +V+ Sbjct: 195 TIITNCSNNYGPYHYPEKLIPLMCINILLGKPLPIYGDGQNVRDWLYVLDHCRALDVVIH 254 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL----IPKSYSHTELIRFIEDRPGHDRRY 294 +G+ GE YNIGGNNE N+D+V + +D L +P S +LI F++DRPGHDRRY Sbjct: 255 RGKPGETYNIGGNNEVTNLDLVKMLCRFMDELASHHLPVKPS-MDLITFVKDRPGHDRRY 313 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 AI+SSK+K+++GW P +E GL +TV WYL + WW PL E Sbjct: 314 AINSSKLKTQLGWAPLVTVEEGLRQTVGWYLTHRHWWEPLLSE 356 >gi|315634111|ref|ZP_07889400.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter segnis ATCC 33393] gi|315477361|gb|EFU68104.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter segnis ATCC 33393] Length = 342 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 176/336 (52%), Positives = 236/336 (70%), Gaps = 6/336 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA R+ + + Q++ +DKLTYAGNL +L E++ ++F DIC Sbjct: 1 MKILVTGGAGFIGSAFIRHSIYHTQDQIVNLDKLTYAGNLEALHEVANDPRYAFELADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ LKE PD +V+FAAESHVDRSI GA FI TNI+GT+ LLE R ++ LS Sbjct: 61 DMQAVQRILKEHHPDCVVHFAAESHVDRSIHGAAAFIQTNIVGTYTLLEAVRDYYQQLSG 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK FRFL ISTDEVYG + L SE Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 EKKKTFRFLHISTDEVYGDVAGTLDLSSETSAYAPSSPYSASKASSDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++++C+NNYGPY +PEKLIP+ I + G + +YG+GQ +RDWLYVEDHV+ALYLVL+ Sbjct: 181 IIITHCANNYGPYQYPEKLIPVMILNALSGEPLPIYGNGQQIRDWLYVEDHVQALYLVLQ 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSH-TELIRFIEDRPGHDRRY 294 +GRIGE YNI + E+ N +IV + +L+ L PK H +LI DRPGHD RY Sbjct: 241 QGRIGESYNISAHCEKTNREIVQVLCDMLEELAPNKPKGIRHYQDLIVHTADRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+D++KI+ E+ W PQ + + + TV WYL + W Sbjct: 301 ALDATKIRQELHWQPQADFIASMRTTVQWYLTHLDW 336 >gi|285019457|ref|YP_003377168.1| dtdp-glucose 4,6-dehydratase [Xanthomonas albilineans GPE PC73] gi|283474675|emb|CBA17174.1| probable dtdp-glucose 4,6-dehydratase protein [Xanthomonas albilineans] Length = 351 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/330 (53%), Positives = 229/330 (69%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNLN+L + ++ F+ DI DR Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GVRVINLDALTYAGNLNTLVSLEGNSDHVFVHGDIGDRA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L E QPDA++NFAAESHVDRSI G FI TN++GT LLE R +W L ++ Sbjct: 64 LVSRLLTEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPDGRR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 QGFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWL+V DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVGDHCEAIRTVLVKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GGN E++NI++V I LLDA P+ I + DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNAEKQNIEVVQAICALLDARRPREDGKPRGSQITHVADRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P + E G+ TV WYL++ W Sbjct: 304 LKNELGWEPTYSFEQGIAITVDWYLNHQDW 333 >gi|16331720|ref|NP_442448.1| dTDP-glucose 4,6-dehydratase [Synechocystis sp. PCC 6803] gi|1001273|dbj|BAA10518.1| dTDP-glucose 4,6-dehydratase [Synechocystis sp. PCC 6803] Length = 342 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 183/337 (54%), Positives = 233/337 (69%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ + V +++V+D LTYAGN +L + + F F+Q DI D Sbjct: 6 ILVTGGAGFIGANFVYHCVQTCGDRRIVVLDALTYAGNRATLAPLEKLPNFRFVQGDIGD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L+E Q + I +FAAESHVDRSILG F+ TN++GTF LLE R W + Sbjct: 66 RHLVDQLLREEQIETIAHFAAESHVDRSILGPGAFVQTNVVGTFTLLEAFREHWQ--RRG 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 QFRFL +STDEVYGSL ++ FSE PY+P+SPYSA+KA SD+LV A+ HTYG+P Sbjct: 124 NPAQFRFLHVSTDEVYGSLTPNEPGFSETTPYSPNSPYSASKAGSDHLVRAYFHTYGLPT 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIPL ++ G + +YGDGQNVRDWLYV DH +AL LVL + Sbjct: 184 LITNCSNNYGPYQFPEKLIPLMCLNILRGEKLPVYGDGQNVRDWLYVTDHCQALDLVLHQ 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G YNIGGNNE KNI++V + L+D L P +LI ++ DRPGHDRRYAID Sbjct: 244 ALPGATYNIGGNNEVKNIELVEILCDLMDELAPDLPVKPARQLISYVTDRPGHDRRYAID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +SKIK E+GW P+ +E GL +TV WYLD+ WWRPL Sbjct: 304 ASKIKRELGWEPKVTVERGLRQTVQWYLDHEAWWRPL 340 >gi|113460852|ref|YP_718919.1| dTDP-glucose 4,6-dehydratase [Haemophilus somnus 129PT] gi|112822895|gb|ABI24984.1| dTDP-glucose 4,6-dehydratase [Haemophilus somnus 129PT] Length = 339 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/333 (51%), Positives = 237/333 (71%), Gaps = 6/333 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSAL RYL+ + + ++ +DKLTYA NL+SL+ + + + F Q DI Sbjct: 1 MNILITGGAGFIGSALIRYLLTETEHTIINVDKLTYAANLDSLQSVVLNPRYFFEQADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I +++QPDA+++ AAESHVDRSI + EFI TNI+GTF LLE TR +W L Sbjct: 61 DQPVITQIFEQYQPDAVIHLAAESHVDRSIAASTEFIQTNIVGTFALLEVTRHYWLKLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK++F F ISTDEVYG L + +E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 NKKERFVFQHISTDEVYGDLIDSEQASTESSPYQPSSPYSASKAASDHLVRAWYRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +L+++C+NNYGP+ EKLIP I ++G + +YGDG +RDWL+VEDHVRALY VL+ Sbjct: 181 ILITHCANNYGPFQHSEKLIPRMILNAVQGKPLPIYGDGLQIRDWLFVEDHVRALYKVLQ 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 KG+IGE YNI N + N+++V I LL+ L+P + ELI +EDR GHD+RY Sbjct: 241 KGKIGESYNISANCAKTNLEVVQTICDLLEQLVPNKPKGIKQYHELIIHVEDRLGHDKRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 AID+ KI++ +GW P ++ +GL KTV WYL+N Sbjct: 301 AIDAYKIQTSLGWTPLQDFTAGLRKTVQWYLNN 333 >gi|75908852|ref|YP_323148.1| dTDP-glucose 4,6-dehydratase [Anabaena variabilis ATCC 29413] gi|75702577|gb|ABA22253.1| dTDP-glucose 4,6-dehydratase [Anabaena variabilis ATCC 29413] Length = 356 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 180/337 (53%), Positives = 233/337 (69%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + +++V+D LTYAGN +L +I F++ DI D Sbjct: 18 ILITGGAGFIGSNFVHHWYEQYPGDRIIVLDALTYAGNRQNLADIEGKANLRFVKGDIGD 77 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I L+E + AI +FAAESHVDRSI+ D FI TN++GTF LLE R W+ Q Sbjct: 78 RALIDQLLEEEKIQAIAHFAAESHVDRSIVAPDAFIQTNVVGTFTLLEAFRHHWT--KQG 135 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+L A+ HTYG+P Sbjct: 136 KPANYRFLHVSTDEVYGSLELDDPAFTETTPYAPNSPYSASKAGSDHLARAYYHTYGLPT 195 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL ++ G + +YGDG N+RDWLYVEDH RAL +V+ + Sbjct: 196 LITNCSNNYGPYHFPEKLIPLICLNILLGKPLPIYGDGLNIRDWLYVEDHCRALDIVIHQ 255 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGGNNE KNID+V I L+D L P ++LI F++DRPGHDRRYAID Sbjct: 256 GKPGETYNIGGNNEIKNIDLVQMICELMDELAPDLPVSPASKLITFVKDRPGHDRRYAID 315 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++KIK+E+GW PQ+ + +GL T+ WYL + WW L Sbjct: 316 ATKIKTELGWEPQQTISTGLRHTIQWYLTHRHWWEAL 352 >gi|152979841|ref|YP_001353943.1| dTDP-D-glucose 4,6-dehydratase [Janthinobacterium sp. Marseille] gi|151279918|gb|ABR88328.1| dTDP-D-glucose 4,6-dehydratase [Janthinobacterium sp. Marseille] Length = 332 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 177/330 (53%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS R + +L +DKLTYAGNL +L + +F+ D+CD Sbjct: 2 ILVTGGAGFIGSNFVREWLLRSSEAILNVDKLTYAGNLGNLDTVMTDVRHTFIHADVCDH 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S L + +P AI++ AAESHVDRSI G EFI TNI GTF LLE R +W+ L + Sbjct: 62 DLMLSLLLKHKPSAIIHCAAESHVDRSIQGPAEFIRTNINGTFSLLEAARAYWTGLGAED 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K QFRFL +STDE YGSL+ G FSE Y P+SPYSA+KA+SD+LV A+ HTYG+P L Sbjct: 122 KLQFRFLHVSTDEAYGSLEAGDAPFSETTAYAPNSPYSASKAASDHLVRAYFHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG+ +RDWLYV DH AL LVL KG Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIANALAGKALPIYGDGRQIRDWLYVGDHCIALRLVLAKG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 GE YNIG N++ N+D+V+ + +LD L P S+ + + ++ DRPGHDRRYAID+ Sbjct: 242 VPGETYNIGAQNQKTNLDVVYTLCDILDELKPLASGKSYRQQVVYVTDRPGHDRRYAIDT 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 KI+ E+GW P E ++GL KTV WYLD + Sbjct: 302 GKIERELGWKPVEAFDTGLRKTVQWYLDTH 331 >gi|114571006|ref|YP_757686.1| dTDP-glucose 4,6-dehydratase [Maricaulis maris MCS10] gi|114341468|gb|ABI66748.1| dTDP-glucose 4,6-dehydratase [Maricaulis maris MCS10] Length = 353 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 167/335 (49%), Positives = 232/335 (69%), Gaps = 1/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + + +D LTYA N +L I+ + +SF + DI Sbjct: 1 MKILVTGGAGFIGSAVVRRAITQRGYTIANLDALTYAANQANLDSIADNPDYSFHRADIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E PDA+++ AAESHVDRSI G F+ TN++GT +L+ R W LS Sbjct: 61 DLDALVKVFAETDPDAVMHLAAESHVDRSIEGPIAFVETNVMGTANMLQAARTHWEGLSD 120 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++D FRF ISTDEVYG+L G F+E Y P+SPY+++KASSD LV AWG T+ +PV Sbjct: 121 ARRDAFRFHHISTDEVYGALGPSGFFTETTRYAPNSPYASSKASSDMLVRAWGKTFKLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP+ FPEKLIP+ I + + G + +YGDG NVRDWLYV+DH AL +L++ Sbjct: 181 VISNCSNNYGPFQFPEKLIPVVILKALAGEAIPVYGDGSNVRDWLYVDDHAEALLTILER 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YN+GG+ E N+D+V +I ++D + +S LI+F+ DRPGHD RYAIDS+ Sbjct: 241 GKLGEIYNVGGDAEVSNLDLVKQICAIIDKELDRSTPSDSLIKFVTDRPGHDFRYAIDSA 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KIKSE+GW P +E G+ +TV WYL+N WW+ + Sbjct: 301 KIKSELGWTPSVTVEEGIAETVRWYLENREWWQAI 335 >gi|171463073|ref|YP_001797186.1| dTDP-glucose 4,6-dehydratase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192611|gb|ACB43572.1| dTDP-glucose 4,6-dehydratase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 352 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 180/333 (54%), Positives = 230/333 (69%), Gaps = 5/333 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG +L N ++ +DKLTYAGNL +L+ + F+ DI D Sbjct: 2 ILVTGGAGFIGGNFVLDWLSNPAAEGIINLDKLTYAGNLATLEPLKNDPRHIFVHGDIGD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + LKE +P AIVNFAAESHVDRSI G +F+ TNI+GTF LLE R W+ L Sbjct: 62 KELVAKLLKEHKPRAIVNFAAESHVDRSIHGPADFVETNIVGTFNLLECAREHWNTLEGK 121 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ FRF +STDEVYGSL F+E PY P+SPYSA+KA+SD+LV AW HTYG PV Sbjct: 122 DKEGFRFHHVSTDEVYGSLSLTDPAFTETNPYEPNSPYSASKAASDHLVRAWFHTYGFPV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NCSNNYGPYHFPEKLIPL I + + +YGDG+ +RDWLYV DH A+ VL K Sbjct: 182 VTTNCSNNYGPYHFPEKLIPLVILNALNSKPLPIYGDGRQIRDWLYVGDHCSAIREVLAK 241 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAID 297 G++GE YNIGG NE+ NID+V I +LD L P++ + E I +++DRPGHDRRYAID Sbjct: 242 GKLGETYNIGGWNEKANIDVVKTICSILDELKPRADGKPYVEQITYVKDRPGHDRRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +S ++ E+GW P E ++G+ KTV WYLDN W Sbjct: 302 ASMVERELGWRPAETFDTGIRKTVLWYLDNPVW 334 >gi|119486647|ref|ZP_01620697.1| dTDP-glucose 4,6-dehydratase [Lyngbya sp. PCC 8106] gi|119456264|gb|EAW37396.1| dTDP-glucose 4,6-dehydratase [Lyngbya sp. PCC 8106] Length = 365 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 235/341 (68%), Gaps = 7/341 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIGS + + + +V+V+D LTYAGN +L + F F+Q DIC Sbjct: 15 RLLVTGGAGFIGSNFVHHWCHAYPEDRVVVLDALTYAGNRQNLATLEDKEHFRFVQGDIC 74 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ L+E + + + +FAAESHVDRSILG FI TN++G+F LL+ R W+ +Q Sbjct: 75 DGALVKKLLQEEEINTVAHFAAESHVDRSILGPGAFIQTNVVGSFTLLDAFRQHWN--AQ 132 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+L A+ HTY +P Sbjct: 133 SSPPDYRFLHVSTDEVYGSLSADDPAFTETTPYAPNSPYSASKAGSDHLARAYYHTYNVP 192 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYH+PEKLIPL ++ G + +YGDGQNVRDWLYV DH RAL V+ Sbjct: 193 TIITNCSNNYGPYHYPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVLDHCRALDTVIH 252 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 +G+ GE YN+GGNNE KNID+V + ++D L P +LI F++DRPGHDRRYAI Sbjct: 253 QGKPGETYNVGGNNEVKNIDLVKMLCRIMDELAPHLPVKPSEQLITFVKDRPGHDRRYAI 312 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D++KI++E+GW P +E GL +TV W+L + WW PL E Sbjct: 313 DATKIQTELGWAPLVTVEEGLRQTVGWFLTHRSWWEPLLSE 353 >gi|17227534|ref|NP_484082.1| dTDP-glucose 4-6-dehydratase [Nostoc sp. PCC 7120] gi|17135016|dbj|BAB77562.1| dTDP-glucose 4-6-dehydratase [Nostoc sp. PCC 7120] Length = 356 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 180/339 (53%), Positives = 234/339 (69%), Gaps = 7/339 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + +++V+D LTYAGN +L +I F++ DI Sbjct: 16 MPILITGGAGFIGSNFVHHWYEKYPGDRMIVLDALTYAGNRQNLADIEGKANLRFVKGDI 75 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I L+E + AI +FAAESHVDRSI+ D FI TN++GTF LLE R W+ Sbjct: 76 GDRALIDQLLEEEKIQAIAHFAAESHVDRSIVAPDAFIQTNVVGTFTLLEAFRHHWT--K 133 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q K +RFL +STDEVYGSL D F+E PY P+SPYSA+KA SD+L A+ HTYG+ Sbjct: 134 QGKPANYRFLHVSTDEVYGSLELDDPAFTETTPYAPNSPYSASKAGSDHLARAYYHTYGL 193 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++NCSNNYGPYHFPEKLIPL ++ G + +YGDG N+RDWLYVEDH RAL +V+ Sbjct: 194 PTLITNCSNNYGPYHFPEKLIPLICLNILLGKPLPIYGDGLNIRDWLYVEDHCRALDIVI 253 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 +G+ GE YNIGGNNE KNID+V I L+D L P ++LI F++DRPGHDRRYA Sbjct: 254 HQGKPGETYNIGGNNEIKNIDLVQMICELMDELAPDLPVSPASKLITFVKDRPGHDRRYA 313 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 I+++KIK+E+GW PQ+ + +GL T+ WYL + WW L Sbjct: 314 INATKIKTELGWEPQQTISTGLRHTIQWYLTHRHWWEAL 352 >gi|311109457|ref|YP_003982310.1| dTDP-glucose 4,6-dehydratase [Achromobacter xylosoxidans A8] gi|310764146|gb|ADP19595.1| dTDP-glucose 4,6-dehydratase [Achromobacter xylosoxidans A8] Length = 354 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 181/334 (54%), Positives = 225/334 (67%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ + ++ +DKLTYAGN SL+ + + DIC Sbjct: 1 MTILVTGGAGFIGANFVLDWLAQSDEPIINLDKLTYAGNPQSLRALQGDKRHELVVGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + +P AI+N AAESHVDRSI G FI TNI+GTF LLE R +WS L Sbjct: 61 DTALVGKLLMQHRPRAIINLAAESHVDRSIHGPGAFIQTNIVGTFSLLEAVRTYWSELEP 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FR L +STDEVYGSL + F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 AAQASFRLLHVSTDEVYGSLSAHEDAFTETHTYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +L +NCSNNYGP FPEKLIPL I + G + +YGDGQ VRDWLYV+DH L VL+ Sbjct: 181 LLTTNCSNNYGPLQFPEKLIPLVIANALAGKPLPIYGDGQQVRDWLYVKDHCSGLRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 GR+GE YNIGG NER N+ +V EI LLDAL P+S S+ I FI+DRPGHDRRYAI Sbjct: 241 AGRLGETYNIGGWNERTNLTVVTEICALLDALQPRSDGASYKGQIAFIKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++SKI E+GW P E E+GL KTV WYL N+ W Sbjct: 301 NASKIGEELGWRPAETFETGLRKTVQWYLGNSQW 334 >gi|171057310|ref|YP_001789659.1| dTDP-glucose 4,6-dehydratase [Leptothrix cholodnii SP-6] gi|170774755|gb|ACB32894.1| dTDP-glucose 4,6-dehydratase [Leptothrix cholodnii SP-6] Length = 355 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 182/331 (54%), Positives = 224/331 (67%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + VL +D LTYAGNL +L + F+Q DICDR Sbjct: 2 ILVTGGAGFIGSNFVLDWLAQSDEPVLNLDVLTYAGNLENLASLQGDARHVFVQGDICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L E +P AIV+FAAESHVDRSI G F+ TNI GT+ LLE R WS L Sbjct: 62 ALIDRLLAEHRPRAIVHFAAESHVDRSIHGPGAFMRTNIEGTYTLLEAARAHWSGLDDAA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRF +STDEVYGSL F+E + P+SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 122 KAAFRFHHVSTDEVYGSLGASDPAFTETKAFEPNSPYSASKAASDHLVRAWFHTYGLPVV 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + + +YGDGQNVRDWLYV DH A+ VL G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIVNALASKPLPIYGDGQNVRDWLYVCDHASAIRAVLAGG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 R+GE YNIGG NE+ N++IV + LLD L P + S+ LI +++DRPGHDRRYAID+ Sbjct: 242 RLGETYNIGGWNEKTNLEIVHTVCDLLDELKPDAAGSYRRLITYVKDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYLD+ W Sbjct: 302 KVERELGWRPAETFETGIRKTVQWYLDHPDW 332 >gi|120612803|ref|YP_972481.1| dTDP-glucose 4,6-dehydratase [Acidovorax citrulli AAC00-1] gi|120591267|gb|ABM34707.1| dTDP-glucose 4,6-dehydratase [Acidovorax citrulli AAC00-1] Length = 361 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 177/332 (53%), Positives = 229/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGNL +L + F+Q DI DR Sbjct: 2 ILVTGGAGFIGANFVLDWLACGDEPVVNLDKLTYAGNLQNLASLQGDARHLFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L +P A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +W L D+ Sbjct: 62 ELLTRLLAGHRPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVREYWQSLPGDE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RAAFRFLHVSTDEVYGTLAPEAPAFAETHPYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDG +RDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVRDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 + GE YN+GG NE+ NI+IV I LLD L P++ + I +++DRPGHDRRYAID+ Sbjct: 242 QPGETYNVGGWNEKPNIEIVKTICTLLDELRPRADGERYESQIAYVKDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E E+G+ KTV WYL + W Sbjct: 302 RKIERELGWKPAETFETGIRKTVEWYLAHGEW 333 >gi|299133413|ref|ZP_07026608.1| dTDP-glucose 4,6-dehydratase [Afipia sp. 1NLS2] gi|298593550|gb|EFI53750.1| dTDP-glucose 4,6-dehydratase [Afipia sp. 1NLS2] Length = 359 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 233/332 (70%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS R + V+ +DKLTYAGNL + +++ F+ DI D Sbjct: 9 ILVTGGAGFIGSNFIRVWLAREVAPVINLDKLTYAGNLENFSDLTNQR-HEFVHGDIGDI 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ L +P AIVNFAAESHVDRSI G +FI TN++GTF LLE R +W L + + Sbjct: 68 VLLKKLLARVRPRAIVNFAAESHVDRSIHGPGDFIATNVVGTFHLLECAREYWLHLDKAE 127 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +D FRFL +STDEVYG+L D FSE Y P+SPY+A+KA+SD+LV AW HTYG+PV+ Sbjct: 128 RDTFRFLHVSTDEVYGTLSADDPAFSETNAYLPNSPYAASKAASDHLVRAWYHTYGLPVI 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I I G + +YGDG +RDWL+VEDH A+ VL G Sbjct: 188 TTNCSNNYGPYQFPEKLIPLMIHNAITGKPLPVYGDGLQIRDWLHVEDHCEAIRCVLTAG 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YNIGGN+E+ NID+V + +LDA P+S + I F++DRPGHDRRYAID+ Sbjct: 248 QLGETYNIGGNSEKANIDVVHTLCDILDAEHPRSDGQPYKTRIAFVKDRPGHDRRYAIDA 307 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++IK+E+GW P+E ESGL KTV WYL N+ W Sbjct: 308 TRIKNELGWTPKETFESGLLKTVRWYLANSTW 339 >gi|34499465|ref|NP_903680.1| dtdpglucose 4,6-dehydratase [Chromobacterium violaceum ATCC 12472] gi|34105317|gb|AAQ61672.1| dTDPglucose 4,6-dehydratase [Chromobacterium violaceum ATCC 12472] Length = 352 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 178/334 (53%), Positives = 230/334 (68%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + + V+ +D LTYAGNL +L + F DI Sbjct: 1 MTILVTGGAGFIGGNFVLDWLAEREETVINLDALTYAGNLETLHTVRTKPNHVFTHGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + L+ +P AIVNFAAESHVDRSI G +FI TNI+GTF LLE R +WS L Sbjct: 61 DRKLVAELLRTHRPRAIVNFAAESHVDRSIHGPGDFIQTNIVGTFNLLECAREYWSGLEG 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRFL +STDEVYG+L + FSE Y P+SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 GDREAFRFLHVSTDEVYGTLRAEDAPFSETNRYEPNSPYSASKAASDHLVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ VRDWLYV+DH A+ VL+ Sbjct: 181 VLTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQVRDWLYVKDHCSAIRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+++V I +LD L P++ + E I F+ DRPGHDRRYAI Sbjct: 241 AGKLGETYNVGGWNEKTNLEVVNTICGILDQLRPRADGRPYREQIHFVSDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ K++ E+GW P E +SG+ KT+ WYL N W Sbjct: 301 DARKLERELGWKPAETFDSGIRKTIEWYLGNPNW 334 >gi|326318820|ref|YP_004236492.1| dTDP-glucose 4,6-dehydratase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375656|gb|ADX47925.1| dTDP-glucose 4,6-dehydratase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 361 Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 178/332 (53%), Positives = 229/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + ++ +DKLTYAGNL +L + F+Q DI DR Sbjct: 2 ILVTGGAGFIGANFVLDWLACGDEPLVNLDKLTYAGNLQNLASLQGDARHLFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L E +P AIVNFAAESHVDRSI G ++FI TN++GTF LLE R +W L D+ Sbjct: 62 ELLSRLLAEHRPRAIVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEGVREYWQSLPGDE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L + F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RAAFRFLHVSTDEVYGTLAPEAPAFAETHSYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDG +RDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVRDHCSAIRRVLQAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R GE YN+GG NE+ NI+IV I LLD L P++ + I +++DRPGHDRRYAID+ Sbjct: 242 RPGETYNVGGWNEKPNIEIVKTICALLDELRPRADGERYESQIAYVKDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E E+G+ KTV WYL + W Sbjct: 302 RKIERELGWKPAETFETGIRKTVEWYLAHGEW 333 >gi|320352683|ref|YP_004194022.1| dTDP-glucose 4,6-dehydratase [Desulfobulbus propionicus DSM 2032] gi|320121185|gb|ADW16731.1| dTDP-glucose 4,6-dehydratase [Desulfobulbus propionicus DSM 2032] Length = 353 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 178/334 (53%), Positives = 234/334 (70%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS + V+ +D LTYAGNL +L I+ + + F++ DI Sbjct: 1 MAIFVTGGAGFIGSNFILEWLRHSDETVINLDTLTYAGNLENLASIANDSRYFFIKSDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I L + +P AI+NFAAESHVDRSI G ++FI TNI+GTF LLE TR +W+ LS+ Sbjct: 61 EFDHIAHLLSQHRPRAIINFAAESHVDRSIHGPEDFIQTNIVGTFRLLEATRAYWNNLSE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ FRFL ISTDEV+G+L D F+E Y P+SPYSA+KA+SD+L+ A+ HTYG+P Sbjct: 121 EARENFRFLHISTDEVFGTLSPDAAAFNEQSQYAPNSPYSASKAASDHLLRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPY FPEKLIPL I + G + LYGDG+ +RDWLYV DH AL LVL Sbjct: 181 VLTTNCSNNYGPYQFPEKLIPLCIHNALAGKPLPLYGDGRQIRDWLYVMDHCAALRLVLA 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAI 296 +GR GE YNIGG NE+ N+++V + +LD L P + + + I F+ DRPGHDRRYAI Sbjct: 241 EGRPGEVYNIGGRNEKSNLEVVHTLCSILDELRPLAEGKRYRQQIIFVPDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++SKI+ E+ W P E SG+ KTV WYL+N W Sbjct: 301 NASKIERELKWRPSETFTSGIRKTVKWYLNNQDW 334 >gi|296123816|ref|YP_003631594.1| dTDP-glucose 4,6-dehydratase [Planctomyces limnophilus DSM 3776] gi|296016156|gb|ADG69395.1| dTDP-glucose 4,6-dehydratase [Planctomyces limnophilus DSM 3776] Length = 342 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 173/339 (51%), Positives = 231/339 (68%), Gaps = 3/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG GFIGSAL R+LV + V+ +D LTYAG++ SL+E++ +Q I Sbjct: 4 MHVLVTGGCGFIGSALVRHLVRNTDWTVVNVDCLTYAGHVESLEEVATHPRHLLIQKHIA 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + +A ++QP A+++ AAESHVDRS+ G EFI TNI+GT+ LLE R + L+ Sbjct: 64 DREAMDAAFAKYQPAAVMHLAAESHVDRSLTGPAEFINTNIVGTYTLLEAARTHYGKLAA 123 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +FRFL +STDEV+G+L G F+E+ Y+P SPYSA+KAS+D+L AW H+YG+PV Sbjct: 124 SDKAKFRFLHVSTDEVFGALGATGQFTEETRYDPHSPYSASKASADHLARAWNHSYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGP+ FPEKLIP+ I + + + +Y G+NVRDWL+V+DHV AL VL+ Sbjct: 184 LVTNCSNNYGPFQFPEKLIPVVIRKALAEEPIPVYAKGENVRDWLHVQDHVSALLRVLET 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAID 297 G IGE Y IGG E +NID+V I +LD L P+ H +LI F+ DRPGHD RYAID Sbjct: 244 GMIGETYAIGGRAEVRNIDLVHVICKVLDELRPRPQGGRHADLITFVSDRPGHDFRYAID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 SKI+ E+GW E G+ TV WYL N W + K Sbjct: 304 CSKIERELGWKQSVTFEQGMRATVEWYLGNQAWVNAVLK 342 >gi|170717338|ref|YP_001784448.1| dTDP-glucose 4,6-dehydratase [Haemophilus somnus 2336] gi|168825467|gb|ACA30838.1| dTDP-glucose 4,6-dehydratase [Haemophilus somnus 2336] Length = 339 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 173/333 (51%), Positives = 236/333 (70%), Gaps = 6/333 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGSAL RYL+ + + ++ +DKLTYA NL+SL+ + + F Q DI Sbjct: 1 MNILITGGAGFIGSALIRYLLTETEHTIINVDKLTYAANLDSLQSAVLNPRYFFEQADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I +++QPDA+++ AAESHVDRSI + EFI TNI+GTF LLE TR +W L Sbjct: 61 DQPVITQIFEQYQPDAVIHLAAESHVDRSIAASTEFIQTNIVGTFALLEVTRHYWLKLPA 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK++F F ISTDEVYG L + +E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 NKKERFVFQHISTDEVYGDLIDSEQASTESSPYQPSSPYSASKAASDHLVRAWYRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +L+++C+NNYGP+ EKLIP I ++G + +YGDG +RDWL+VEDHVRALY VL+ Sbjct: 181 ILITHCANNYGPFQHSEKLIPRMILNAVKGKPLPIYGDGLQIRDWLFVEDHVRALYKVLQ 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 KG+IGE YNI N + N+++V I LL+ L+P + ELI +EDR GHD+RY Sbjct: 241 KGKIGESYNISANCAKTNLEVVQTICDLLEQLVPNKPKGIKQYHELIIHVEDRLGHDKRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 AID+ KI++ +GW P ++ +GL KTV WYL+N Sbjct: 301 AIDAYKIQTSLGWTPLQDFTAGLRKTVQWYLNN 333 >gi|91789862|ref|YP_550814.1| dTDP-glucose 4,6-dehydratase [Polaromonas sp. JS666] gi|91699087|gb|ABE45916.1| dTDP-glucose 4,6-dehydratase [Polaromonas sp. JS666] Length = 360 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 180/332 (54%), Positives = 227/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + V+ ID LTYAGNL +L + F++ DI D Sbjct: 2 IFVTGGAGFIGANFVLDWLAQTDEPVVNIDNLTYAGNLENLSSLQADPRHVFVKGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L QP AI+NFAAESHVDRSI G ++FI TNI+GTF LLE R +W L D Sbjct: 62 ALVGRLLATHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAYWGGLQGDA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +FRFL +STDEVYGSL F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 KAEFRFLHVSTDEVYGSLAPADAAFTETHRYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 + GE YN+GG NE+ NI+IV + LLD L P++ ++ E I +++DRPGHDRRYAID+ Sbjct: 242 KTGEVYNVGGWNEKPNIEIVNIVCTLLDELRPRADGKNYREQISYVKDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI+ E+GW P E E+G+ KTV WYL N W Sbjct: 302 SKIQRELGWKPAETFETGIRKTVQWYLANPDW 333 >gi|325928549|ref|ZP_08189737.1| dTDP-glucose 4,6-dehydratase [Xanthomonas perforans 91-118] gi|325541088|gb|EGD12642.1| dTDP-glucose 4,6-dehydratase [Xanthomonas perforans 91-118] Length = 326 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 168/308 (54%), Positives = 220/308 (71%), Gaps = 3/308 (0%) Query: 26 IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESH 85 ++V+ +D LTYAGNLN+L + + F++ DI D + S L E QPDA++NFAAESH Sbjct: 1 MRVVNLDALTYAGNLNTLAPLEGNPHHVFVKGDIGDGALVASLLHEHQPDAVLNFAAESH 60 Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGL 144 VDRSI G FI TN++GT LLE R W L ++++D FRFL +STDEVYG+L + G Sbjct: 61 VDRSIEGPGAFIQTNVVGTLALLEAVRDHWKALPKERQDAFRFLHVSTDEVYGTLGETGK 120 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL +NCSNNYGPYHFPEKLIPL I + Sbjct: 121 FTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIAK 180 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 + G + +YGDG+ VRDWL+V DH A+ VL KG++GE YN+GGN+ER+NI++V I Sbjct: 181 ALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGKVGETYNVGGNSERQNIEVVQAIC 240 Query: 265 FLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 LLD P+ I ++ DRPGHDRRYAID+SK+K+E+GW P E G+ +TV Sbjct: 241 ALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAIDASKLKNELGWEPAYTFEQGIAQTVH 300 Query: 323 WYLDNNWW 330 WYL N W Sbjct: 301 WYLTNQAW 308 >gi|108805904|ref|YP_645841.1| dTDP-glucose 4,6-dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108767147|gb|ABG06029.1| dTDP-glucose 4,6-dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 364 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 227/331 (68%), Gaps = 5/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG V + V+ +D LTYAGNL +L + F++ I DR Sbjct: 14 ILVTGGAGFIGGNFVLLAVGAYR--VVNLDALTYAGNLETLARVEGHPDHLFVRGRIGDR 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L +P A+VNFAAE+HVDRSI G F+ TN++ T LLE +W L ++ Sbjct: 72 ELVEHLLASHRPRAVVNFAAETHVDRSIDGPRAFVQTNVVETLELLEAVLGYWGALEGEE 131 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FR + +STDEVYG+L +G F+E+ PY P+SPY+A+KA+SD+LV A+ TYG+P ++ Sbjct: 132 RGSFRLVHVSTDEVYGTLGPEGRFTEESPYRPNSPYAASKAASDHLVRAYNRTYGLPAII 191 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGPY +PEKL+PL ITR +EG + +YGDG VRDWLYVEDH RA+ VL++G Sbjct: 192 TNCSNNYGPYQYPEKLVPLTITRALEGRPIPVYGDGGQVRDWLYVEDHCRAIARVLEEGA 251 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG++ER N+ V I LLD L+P S H LI F+EDRPGHDRRYAID+ Sbjct: 252 PGEVYNIGGDSERTNLQTVRTICGLLDRLVPGSPHAPHGSLITFVEDRPGHDRRYAIDAG 311 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P+E ESG+ KTV WYL+N W Sbjct: 312 KIGRELGWRPEETFESGMEKTVRWYLENRGW 342 >gi|26988516|ref|NP_743941.1| dTDP-glucose 4,6-dehydratase [Pseudomonas putida KT2440] gi|24983283|gb|AAN67405.1|AE016367_5 dTDP-glucose 4,6-dehydratase [Pseudomonas putida KT2440] Length = 366 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 179/360 (49%), Positives = 232/360 (64%), Gaps = 20/360 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + VL +D LTYAGNL +L+ + + F+Q +ICD Sbjct: 2 ILVTGGAGFIGSNFVLQWCAHNEEPVLNLDALTYAGNLANLQPLEGNPQHRFVQGNICDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R W+ L + Sbjct: 62 ALLTKLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAHWNSLEGAE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KEAFRFLHVSTDEVYGTLGPNDPAFTETTPYAPNSPYSASKAASDHLVRSYFHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 GE YNIGG NE+ NIDIV + LLD + P + + ELI ++ DR Sbjct: 242 AFGETYNIGGWNEKANIDIVRTLCSLLDEMAPAASRQVINQKTGEPVEQYAELIAYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W + + D Y W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVAWYLANQKWVKGVM-----DGSYRDW 356 >gi|226943709|ref|YP_002798782.1| dTDP-glucose 4,6-dehydratase [Azotobacter vinelandii DJ] gi|226718636|gb|ACO77807.1| dTDP-glucose 4,6-dehydratase [Azotobacter vinelandii DJ] Length = 351 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/334 (53%), Positives = 235/334 (70%), Gaps = 5/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIG+ ++ V+ +DKLTYAGNL +LK + + F++ DI Sbjct: 1 MTILVTGSAGFIGANFVLDWLHQHDEAVVSLDKLTYAGNLANLKSLEGDDRHVFVKGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E+QP A+VNFAAESHVDRSI G ++FI TNI+GTF LLE R++ + L Sbjct: 61 DSKLVAGLLAEYQPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRVYHAQL-H 119 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D FRFL +STDEVYGSL+ F+E Y P+SPYSA+KA+SD+LV A+ HTY +P Sbjct: 120 DGAAAFRFLHVSTDEVYGSLEPTDPAFTERNRYEPNSPYSASKAASDHLVRAYHHTYKLP 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ VRDWLYV+DH A+ VL+ Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLIIHNALSGKPLPIYGDGQQVRDWLYVKDHCSAVRRVLE 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 G++GE YN+GG NE+ N+D+V + +LD P+ S+ E I F++DRPGHDRRYAI Sbjct: 240 AGKLGETYNVGGWNEKTNLDVVHTLCDILDQERPRGDGRSYREQITFVKDRPGHDRRYAI 299 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D++K++ ++GW P E ESG+ KTV WYLDN W Sbjct: 300 DATKLERDLGWKPAETFESGIRKTVRWYLDNQGW 333 >gi|332972996|gb|EGK10936.1| dTDP-glucose 4,6-dehydratase [Kingella kingae ATCC 23330] Length = 336 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 168/331 (50%), Positives = 227/331 (68%), Gaps = 6/331 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + V+ +DKLTYAGNL ++ + S+ ++F QVDI Sbjct: 1 MKILITGGAGFIGSAVVRHIITHTQDSVVNVDKLTYAGNLANIASVVHSSRYAFEQVDII 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + QPDA+++ AAESHVD SI A EFI TNI+GTF LLE R +W Sbjct: 61 NRAELDRVFAQHQPDAVMHLAAESHVDNSIHSAGEFIQTNIVGTFTLLEAARHYWQQKQP 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 AQRAAFRFHHISTDEVYGDLPDTAALFTETTPYAPSSPYSASKASSDHLVRAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYG + FPEKLIPL I + G + +YG+G VRDWL+V+DH RAL+ V+ Sbjct: 181 TIITNCSNNYGSHQFPEKLIPLTILNALSGKPIPIYGNGLQVRDWLFVDDHARALHQVIT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRY 294 +G++GE YNIGGN+E+ N+ +V I LL+ P + +LI + DR GHD RY Sbjct: 241 QGKVGESYNIGGNSEQTNLAVVQTICALLEQFAPNKPHGVARYADLITHVADRAGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ KI+ E+GW QE +G+ KTV WYL Sbjct: 301 AIDTQKIQRELGWQAQETFTTGIRKTVEWYL 331 >gi|71733301|ref|YP_273241.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553854|gb|AAZ33065.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 366 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 176/343 (51%), Positives = 229/343 (66%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS R VL +D LTYAGNL +L+ + ++ F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVRQWCARNDEPVLNLDALTYAGNLANLQSLEGNDQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ELLTRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KTAFRFLHVSTDEVYGTLGANDPAFTETTPYLPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVHTLCALLDELTPAAARQVINQKTGELVSNYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E ++G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWTPAETFDTGIRKTVEWYLANQQW 344 >gi|303257173|ref|ZP_07343187.1| dTDP-glucose 4,6-dehydratase [Burkholderiales bacterium 1_1_47] gi|302860664|gb|EFL83741.1| dTDP-glucose 4,6-dehydratase [Burkholderiales bacterium 1_1_47] Length = 354 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/336 (52%), Positives = 242/336 (72%), Gaps = 9/336 (2%) Query: 1 MRLIVTGGAGFIGS--ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+L++TGGAGFIGS L R D +VL +DKLTY+GNL++L + + +SF+Q D Sbjct: 2 MKLLITGGAGFIGSNFILDRIEKGD---KVLNLDKLTYSGNLDNLISVQDNENYSFIQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + L EF+PDA+VNFAAE+HVDRS++ + F+ TN++GT LL ET +W L Sbjct: 59 IGDKILTQKILSEFRPDAVVNFAAETHVDRSVVDPESFVKTNVLGTSNLLLETLEYWKSL 118 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 SQ+++ +FRF ISTDEVYGSL F ED PY P+SPYSA+KASSD+ V A+ TYG Sbjct: 119 SQEERTRFRFHHISTDEVYGSLGFKDSAFREDTPYAPNSPYSASKASSDHFVRAFHETYG 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P L+SNCSNNYGP FPEKLIPL I IEG + +YG+G+N+RDWL+V DH A+ L+ Sbjct: 179 LPTLISNCSNNYGPRQFPEKLIPLMILNAIEGKPLPIYGNGKNIRDWLHVSDHCGAISLM 238 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRY 294 L++ GE YN+GGN+E+ N+++V I +LD +P+S S++E I F++DRPGHD RY Sbjct: 239 LERAMPGECYNVGGNSEKNNLEVVAAIINVLDQEMPRSDGKSYSEQIHFVKDRPGHDLRY 298 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKIK ++GW P+ N + G+ +TV WYL N W Sbjct: 299 AIDASKIKKDLGWTPKFNFDQGIRETVLWYLKNAEW 334 >gi|331000816|ref|ZP_08324462.1| dTDP-glucose 4,6-dehydratase [Parasutterella excrementihominis YIT 11859] gi|329570344|gb|EGG52077.1| dTDP-glucose 4,6-dehydratase [Parasutterella excrementihominis YIT 11859] Length = 353 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 178/336 (52%), Positives = 242/336 (72%), Gaps = 9/336 (2%) Query: 1 MRLIVTGGAGFIGS--ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+L++TGGAGFIGS L R D +VL +DKLTY+GNL++L + + +SF+Q D Sbjct: 1 MKLLITGGAGFIGSNFILDRIEKGD---KVLNLDKLTYSGNLDNLISVQDNENYSFIQGD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + L EF+PDA+VNFAAE+HVDRS++ + F+ TN++GT LL ET +W L Sbjct: 58 IGDKILTQKILSEFRPDAVVNFAAETHVDRSVVDPESFVKTNVLGTSNLLLETLEYWKSL 117 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 SQ+++ +FRF ISTDEVYGSL F ED PY P+SPYSA+KASSD+ V A+ TYG Sbjct: 118 SQEERTRFRFHHISTDEVYGSLGFKDSAFREDTPYAPNSPYSASKASSDHFVRAFHETYG 177 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P L+SNCSNNYGP FPEKLIPL I IEG + +YG+G+N+RDWL+V DH A+ L+ Sbjct: 178 LPTLISNCSNNYGPRQFPEKLIPLMILNAIEGKPLPIYGNGKNIRDWLHVSDHCGAISLM 237 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRY 294 L++ GE YN+GGN+E+ N+++V I +LD +P+S S++E I F++DRPGHD RY Sbjct: 238 LERAMPGECYNVGGNSEKNNLEVVAAIINVLDQEMPRSDGKSYSEQIHFVKDRPGHDLRY 297 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKIK ++GW P+ N + G+ +TV WYL N W Sbjct: 298 AIDASKIKKDLGWTPKFNFDQGIRETVLWYLKNAEW 333 >gi|319788038|ref|YP_004147513.1| dTDP-glucose 4,6-dehydratase [Pseudoxanthomonas suwonensis 11-1] gi|317466550|gb|ADV28282.1| dTDP-glucose 4,6-dehydratase [Pseudoxanthomonas suwonensis 11-1] Length = 351 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 175/330 (53%), Positives = 227/330 (68%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V I+V+ +D LTYAGNL++L + + F+ DI DR Sbjct: 5 LVTGGAGFIGGNFVLEAVAR-GIKVVNLDALTYAGNLDTLASLEGNPDHVFVHGDIGDRA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L E +PDA++NFAAESHVDRSI G F+ TN++GT LLE R +W L K Sbjct: 64 LVSRLLAEHRPDAVLNFAAESHVDRSIDGPAAFVQTNVVGTLGLLEAVRDYWKRLEGGAK 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYG+L + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 QDFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + G + +YGDG+ VRDWLYV DH A+ VL KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGRQVRDWLYVSDHCEAIRTVLAKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF--IEDRPGHDRRYAIDSSK 300 GE YN+GGN E++NI++V I LLD P+ ++ + DRPGHDRRYAID+SK Sbjct: 244 GETYNVGGNAEKQNIEVVRTICRLLDQRRPREDGQPREVQITHVADRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+E+GW P+ E G+ TV WYL++ W Sbjct: 304 LKNELGWEPKYTFEQGIAATVDWYLEHQDW 333 >gi|299532671|ref|ZP_07046059.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni S44] gi|298719306|gb|EFI60275.1| dTDP-glucose 4,6-dehydratase [Comamonas testosteroni S44] Length = 356 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 179/332 (53%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + + V+ IDKLTYAGNL +L + F+Q DI D Sbjct: 2 IFVTGGAGFIGANFVLDWLAHVNEPVVNIDKLTYAGNLENLASLKGDARHVFVQADIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + QP A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +W+ L + Sbjct: 62 AQLAQLLAQQQPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRAYWNGLEGEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L F+E+ Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 KSGFRFLHVSTDEVYGTLAPTDPAFTEEHNYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLVIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GG NE+ NIDIV + LLD L P++ ++ E I ++ DRPGHDRRYAID+ Sbjct: 242 RLGETYNVGGWNEKANIDIVKTVCSLLDELRPRADGKAYAEQITYVTDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E E+G+ KTV WYL N W Sbjct: 302 RKLERELGWKPAETFETGIRKTVQWYLANPEW 333 >gi|77920186|ref|YP_358001.1| dTDP-glucose 4,6-dehydratase [Pelobacter carbinolicus DSM 2380] gi|77546269|gb|ABA89831.1| dTDP-glucose 4,6-dehydratase [Pelobacter carbinolicus DSM 2380] Length = 362 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 180/336 (53%), Positives = 231/336 (68%), Gaps = 9/336 (2%) Query: 2 RLIVTGGAGFIGS---ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTGG GFIGS + R + D I ++ +DKLTYAGN ++L+ + Q + + F+ D Sbjct: 3 KILVTGGCGFIGSNFIHVARQFLPD--IAIINLDKLTYAGNPSNLRGLEQGSGYRFVAGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + + E + D +V+FAAESHVDRSI G EFI TNI+GTF LLE R W Sbjct: 61 ICDIDLVSRIFTEEKIDTVVHFAAESHVDRSIEGPAEFIQTNIVGTFNLLEAARKTWLAQ 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D+ RFL +STDEVYGSL G F+E PY+P SPYSA+KASSD+LV A+ HTYG+ Sbjct: 121 PADENRDKRFLHVSTDEVYGSLGATGFFTETTPYDPRSPYSASKASSDHLVSAYFHTYGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWL+V DH A+ VL Sbjct: 181 PTLITNCSNNYGPYQFPEKLIPLIINNALNGKPLPVYGDGKNVRDWLFVADHCHAILQVL 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLD---ALIPKSYSHTELIRFIEDRPGHDRRY 294 +GRIGE YNIGGNNER+NI++V I +LD L+ ELI F++DR GHDRRY Sbjct: 241 ARGRIGETYNIGGNNERQNIEVVHTICDILDEKVGLLASGKPRRELISFVKDRAGHDRRY 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+SKI ++ GW P E G+ +T+ WYLDN W Sbjct: 301 AIDASKIGNDPGWQPAVTFEEGIRRTIDWYLDNPDW 336 >gi|294675733|ref|YP_003576348.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] gi|294474553|gb|ADE83941.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] Length = 353 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/338 (52%), Positives = 233/338 (68%), Gaps = 7/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + V+ +D LTYA L+++ ++ S L++F Q DI Sbjct: 5 MKILVTGGAGFIGSAVVRLAIARGH-AVVNVDALTYAACLDNVASVAGSPLYAFEQADIR 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + L QPDA+++ AAESHVDRSI G FI TN++GT+ +L+ R W + Sbjct: 64 DGAAILAILDRHQPDAVMHLAAESHVDRSIDGPGVFIETNVMGTYQMLQAARQHWE--GR 121 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + FRF ISTDEV+GSL + F+ED PY+P SPYSA+KA SD+LV AW TYG+ Sbjct: 122 GRPGTFRFHHISTDEVFGSLPHDPQVKFTEDTPYDPRSPYSASKAGSDHLVRAWHETYGL 181 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVLL+NCSNNYGP+HFPEKLIP+ I + G + +YGDG N+RDWLYVEDH AL V+ Sbjct: 182 PVLLTNCSNNYGPFHFPEKLIPVIILNALAGKALPIYGDGSNIRDWLYVEDHADALLTVV 241 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAI 296 +KG +G YNIGG NER N+++V + +LD PK S S+ + I F+ DRPGHD RYAI Sbjct: 242 EKGAVGRSYNIGGENERTNLELVRTLCEILDRKRPKASGSYADQITFVTDRPGHDARYAI 301 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D ++I++E+GW P +E GL +TV WYL N WWR L Sbjct: 302 DPTRIRTELGWRPSVTVEEGLERTVDWYLANESWWRAL 339 >gi|120555542|ref|YP_959893.1| dTDP-glucose 4,6-dehydratase [Marinobacter aquaeolei VT8] gi|120325391|gb|ABM19706.1| dTDP-glucose 4,6-dehydratase [Marinobacter aquaeolei VT8] Length = 360 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 173/330 (52%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS R + + ++ +D LTYAGN +L +I QS + F Q+DI D Sbjct: 2 ILVTGGCGFIGSNFIRLWLAETDEPIVNMDALTYAGNAENLADIQQSERYFFEQIDIRDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L+ + P AI++FAAESHVDRSI + F+ TN++GTF LL W+ Q + Sbjct: 62 AAVAGVLERYHPRAILHFAAESHVDRSIKEPEAFLQTNVMGTFNLLNSALGIWNQDGQSE 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL + FSE PY P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 R--FRFLHVSTDEVYGSLGRTDPAFSEKHPYQPNSPYSASKAASDHLVRAWHHTYGLPVL 179 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I R + G + +YGDG NVRDWLYVEDH RA+ VL +G Sbjct: 180 TTNCSNNYGPYQFPEKLIPLMIERALAGETLPVYGDGSNVRDWLYVEDHCRAIMTVLDRG 239 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGGN ER N+++V + +L L P+S + EL+RF++DRPGHD+RYAI+++ Sbjct: 240 EPGETYNIGGNEERTNLEVVDALTNVLQILRPRSGGYRELVRFVDDRPGHDKRYAINATH 299 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I +GW P+ + GL +TV WYL+N W Sbjct: 300 IADTLGWRPEVDFREGLIRTVEWYLENRQW 329 >gi|294665239|ref|ZP_06730536.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604990|gb|EFF48344.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 351 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 174/330 (52%), Positives = 226/330 (68%), Gaps = 4/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNL +L + F+ +I DR Sbjct: 5 LVTGGAGFIGGNFVLEAVA-AGVRVITLDALTYAGNLATLTSLRDHPGHVFVHGNIGDRA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E +PDA++NFAAE+HVDRSI G F+ TN++GT LL+ W LS ++ Sbjct: 64 LVSRVLEEHRPDAVLNFAAETHVDRSIDGPAAFVQTNVVGTLGLLQSVLDHWRTLSPGQR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 KAFRFLHVSTDEVYGSLGENGRFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + + +YGDG+ VRDWL+V DH A+ VL+KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALASEPLPIYGDGKQVRDWLFVSDHCDAIRTVLEKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGGN ER+NI++V I LLD L P++ I + DRPGHDRRYAID+SK Sbjct: 244 GETYNIGGNAERQNIEVVHTICTLLDQLRPRADGQPRASQITHVADRPGHDRRYAIDASK 303 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +++E+GW P E G+ TV WYLDN W Sbjct: 304 LRNELGWQPAYRFEQGIALTVQWYLDNQDW 333 >gi|328954209|ref|YP_004371543.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] gi|328454533|gb|AEB10362.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] Length = 356 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 232/331 (70%), Gaps = 4/331 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS +++ +DKLTYAGN+ +L + F+ I DRE Sbjct: 5 LVTGGAGFIGSNFVLQQRRAKAARIINLDKLTYAGNIYNLAILKDDPDHIFVHGSIGDRE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +F+P A+++FAAESHVDRSI + FI TN++GTF LLEE R +W L+ ++ Sbjct: 65 LVSRLLSQFRPQAVIHFAAESHVDRSIQHPETFIETNVVGTFRLLEEVRQYWGNLTTSER 124 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + FRFLQISTDEVYGSL D F+E PY P+SPY+A+KA+SD+LV A+ TYG+P+L+ Sbjct: 125 ENFRFLQISTDEVYGSLGPDDPAFTETTPYAPNSPYAASKAASDHLVRAYHETYGVPILI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP FPEK IPL I + G + LYGDGQN+RDWLYV DH A++LVL++G Sbjct: 185 TNCSNNYGPLQFPEKFIPLMILNALRGKSLPLYGDGQNIRDWLYVADHCEAVHLVLERGV 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDSS 299 IGE YN+GG +E+ N+ +V +I +LD L+P +S H LI+F+ DRPGHDRRYA++ Sbjct: 245 IGESYNLGGLSEQTNLQVVSQICEILDRLVPHAQSVPHYSLIKFVPDRPGHDRRYAMNIG 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P+E+ G+ KTV WYLD+ W Sbjct: 305 KITRELGWKPKESFYDGIVKTVRWYLDHPDW 335 >gi|332529597|ref|ZP_08405553.1| dTDP-glucose 4,6-dehydratase [Hylemonella gracilis ATCC 19624] gi|332040947|gb|EGI77317.1| dTDP-glucose 4,6-dehydratase [Hylemonella gracilis ATCC 19624] Length = 355 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 181/336 (53%), Positives = 229/336 (68%), Gaps = 8/336 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ----VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++VTGGAGFIGS + VL +DKLTYAGNL +L + F+Q D Sbjct: 2 ILVTGGAGFIGSNFVLDWLGTGHAHRDEPVLNLDKLTYAGNLENLASLQGDARHVFVQGD 61 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + L E +P A+VNFAAESHVDRSI G ++FI TNI+GTF LLE R +WS L Sbjct: 62 IGDSALLTCLLAEHRPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAYWSGL 121 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ + FRFL +STDEVYGSL F+E Y P+SPYSA+KA+SD+LV A+ HTYG Sbjct: 122 NEPTRSAFRFLHVSTDEVYGSLAAQDPAFTEAHSYEPNSPYSASKAASDHLVRAYHHTYG 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PVL +NCSNNYGPYHFPEKLIPL I I+G + +YGDG VRDWLYV+DH A+ V Sbjct: 182 LPVLTTNCSNNYGPYHFPEKLIPLMIVNAIDGKPLPVYGDGMQVRDWLYVKDHCSAVREV 241 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRY 294 L GR+GE YN+GG NE+ NI+IV + LLD L P+ ++ I +++DRPGHDRRY Sbjct: 242 LVSGRVGETYNVGGWNEKPNIEIVKTLCTLLDELHPRGDGQAYARQISYVKDRPGHDRRY 301 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+ K++ E+GW P E E+G+ KTV WYL N W Sbjct: 302 AIDARKLERELGWKPTETFETGIRKTVEWYLQNPDW 337 >gi|330816478|ref|YP_004360183.1| dTDP-glucose 4,6-dehydratase [Burkholderia gladioli BSR3] gi|327368871|gb|AEA60227.1| dTDP-glucose 4,6-dehydratase [Burkholderia gladioli BSR3] Length = 353 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 229/331 (69%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAG+ ++L + + + F++ DICDR Sbjct: 2 IVVTGGAGFIGANFVLDWASREAEPVVNVDKLTYAGSRSTLHLLQAQSRYGFVEADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ +P AIV+FAAESHVDRSI EFI +N++GTF LL+ +W L + Sbjct: 62 VAMDHVFEKHRPRAIVHFAAESHVDRSIRMPAEFIQSNVVGTFTLLQAAHRYWLGLGTAE 121 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEV+GSL FSE PY P+SPYSATKA+SD+LV AW HT+G+P L Sbjct: 122 KRAFRFLHVSTDEVFGSLGPHDAPFSEQSPYAPNSPYSATKAASDHLVRAWHHTFGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGP+ FPEKLIPL I +EG+ + +YGDGQNVRDWLYV DH AL VL G Sbjct: 182 TTHCSNNYGPFQFPEKLIPLMIRCALEGNSLPIYGDGQNVRDWLYVGDHCSALRQVLAGG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YNIGG NE N+D+V + LLD P ++ S+ E IR + DRPGHDRRYAID++ Sbjct: 242 VPGRAYNIGGRNELTNLDVVGALCDLLDRFQPRRAGSYREQIRMVSDRPGHDRRYAIDAT 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++++E+GW P E+ E+GL KTV WYLD+ W Sbjct: 302 RMQTELGWMPTESFETGLEKTVRWYLDHQRW 332 >gi|226941910|ref|YP_002796984.1| DTDPglucose 4,6-dehydratase [Laribacter hongkongensis HLHK9] gi|226716837|gb|ACO75975.1| DTDPglucose 4,6-dehydratase [Laribacter hongkongensis HLHK9] Length = 355 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 174/334 (52%), Positives = 226/334 (67%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGNL +L+ + +F++ DI Sbjct: 1 MTILVTGGAGFIGSNFVLDWLAQSDEPVVNLDKLTYAGNLETLQSLEGDARHAFVRGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L QP A+++FAAESHVDRSI GA +FI TNI+GTF LLE R +W L Sbjct: 61 DNALVTQLLATHQPRAVIHFAAESHVDRSIHGAADFIQTNIVGTFSLLESVRQYWQALPA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF+ +STDEV+GSL+ G F+E Y P+SPYSA+KA+SD+LV AW TYG+P Sbjct: 121 GDQAVFRFVHVSTDEVFGSLEPGAAPFTEAHGYEPNSPYSASKAASDHLVRAWHQTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL ++CSNNYGPYHFPEKLIPL I + G + +YGDGQ VRDWLYV DH A+ VL Sbjct: 181 VLTTHCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGDGQQVRDWLYVGDHCSAIRCVLA 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 +G G YNIGG NE+ N+++V I LLD L P++ + I F+ DRPGHDRRYAI Sbjct: 241 QGAAGATYNIGGWNEKTNLEVVQAICALLDELSPRADGQPYALQIAFVTDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ ++ E+GW P E ++GL KTVCWYL++ W Sbjct: 301 DAGRLARELGWRPAETFDTGLRKTVCWYLEHPQW 334 >gi|226326716|ref|ZP_03802234.1| hypothetical protein PROPEN_00574 [Proteus penneri ATCC 35198] gi|225204937|gb|EEG87291.1| hypothetical protein PROPEN_00574 [Proteus penneri ATCC 35198] Length = 310 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 170/305 (55%), Positives = 217/305 (71%), Gaps = 6/305 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++ + V+V+DKLTYAGNL SL ++ S ++F QVDICD Sbjct: 5 RILVTGGAGFIGSAVVRHIIENTNDSVVVVDKLTYAGNLESLATVADSERYAFEQVDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W L + Sbjct: 65 SAELDRLFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARRFWQALPEG 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L+ F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 125 KKTAFRFHHISTDEVYGDLEGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPYHFPEKLIPL I I G + +YG G+ +RDWLYVEDH RALYLV Sbjct: 185 VITNCSNNYGPYHFPEKLIPLIILNAISGKPLPVYGKGEQIRDWLYVEDHARALYLVATT 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G+ YNIGG+NER+NID+V I LL+ L P + +LI +++DRPGHD RYA Sbjct: 245 ATPGKTYNIGGHNERRNIDVVKTICALLEELYPAKPEGVAQYVDLITYVKDRPGHDLRYA 304 Query: 296 IDSSK 300 ID++K Sbjct: 305 IDAAK 309 >gi|224826611|ref|ZP_03699712.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] gi|224601212|gb|EEG07394.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] Length = 353 Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 175/332 (52%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ R + VLV+DKLTY+GN +L+ + ++ DI D Sbjct: 2 ILVTGGAGFIGANFVRLWLEQNDEPVLVLDKLTYSGNAANLQPYLEEGRVELVRGDIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E +P AI+NFAAESHVDRSI G F+ TNI GTF LL+ T +WS L Sbjct: 62 ALLERLLAEHRPRAILNFAAESHVDRSIHGPAVFVETNIDGTFRLLQATTAYWSGLPDGD 121 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEV+GSL + F E PY P+SPY+A+KA+SD+LV AW HTYG+PVL Sbjct: 122 QAAFRFLHVSTDEVFGSLGEHDAPFCETTPYAPNSPYAASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNCSNNYGPY FPEKLIPL I R ++G + +YGDG+ +RDWLYVEDH RAL VL++G Sbjct: 182 TSNCSNNYGPYQFPEKLIPLMIDRALDGQPLPVYGDGRQIRDWLYVEDHCRALMAVLERG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 R GE Y IGG+ E+ N+++V + LDA P++ S+ + I F+ DRPGHDRRYAID+ Sbjct: 242 RAGEVYAIGGSCEKTNLEVVETLCATLDACRPRADGVSYRQQIAFVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P+E SG+ +TV WYL N W Sbjct: 302 GKMRRELGWEPRETFASGIERTVAWYLANPEW 333 >gi|257092763|ref|YP_003166404.1| dTDP-glucose 4,6-dehydratase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045287|gb|ACV34475.1| dTDP-glucose 4,6-dehydratase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 355 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 180/334 (53%), Positives = 226/334 (67%), Gaps = 4/334 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + ++ +DKLTYAGN +L ++ F+ DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAQSDEAIVNLDKLTYAGNRENLSSLAGDPRHIFVHGDIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L QP AIVNFAAESHVDRSI G ++FI TNI+G+F LLE TR +W L + Sbjct: 62 ALTSQLLARHQPRAIVNFAAESHVDRSIHGPEDFIQTNIVGSFHLLEATRGYWGSLPDEA 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +FRFL +STDEVYGSL D+ FSE Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 QRRFRFLHVSTDEVYGSLARDEPAFSELHRYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ +RDWLYV DH A+ VL G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIVNALAGKPLPVYGDGQQIRDWLYVRDHCSAIRRVLDAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R GE YNIGG NE+ N+DIV + LLD L + + + I ++ DRPGHDRRYAID+ Sbjct: 242 RPGETYNIGGWNEKPNLDIVHTVCLLLDELRARGDGKPYRDQIVYVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI+SE+GW P E SG+ KTV WYL+N W R Sbjct: 302 RKIESELGWRPAETFASGIRKTVQWYLENQDWVR 335 >gi|38145976|emb|CAE18175.1| HIO873 [Haemophilus influenzae] Length = 317 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 171/316 (54%), Positives = 232/316 (73%), Gaps = 6/316 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TG +GFIGSAL RY++ + V+ IDKLTYA N ++L E+ + + F Q+DIC Sbjct: 1 MNILITGRSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALTEVENNPRYVFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W L + Sbjct: 61 DLNVIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWYTLDE 120 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 121 AKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++N SNNYG Y PEKLIPL I++ + G + +YGDGQ +RDWL+VE+HV+ALYLVL Sbjct: 181 VIITNRSNNYGAYQHPEKLIPLVISKALMGKPLPIYGDGQQIRDWLFVEEHVQALYLVLT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRY 294 KGR+GE YNIGGN E+ N+++V I LL+ L P + + +LI F++DRPGHD RY Sbjct: 241 KGRVGENYNIGGNCEKTNLEVVKTICQLLEELAPNKPNNIKYYDDLIIFVKDRPGHDVRY 300 Query: 295 AIDSSKIKSEIGWFPQ 310 ++D SKI +E+GW P+ Sbjct: 301 SLDCSKIHAELGWQPK 316 >gi|297538707|ref|YP_003674476.1| dTDP-glucose 4,6-dehydratase [Methylotenera sp. 301] gi|297258054|gb|ADI29899.1| dTDP-glucose 4,6-dehydratase [Methylotenera sp. 301] Length = 361 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 175/332 (52%), Positives = 230/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IVTGGAGFIG+ + ++ +DKLTYAGNL +L E+ + F+ DI D+ Sbjct: 5 IIVTGGAGFIGANFVLAWIKQGLGPIVNLDKLTYAGNLENLVEVQHNPEHIFVHGDIGDQ 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + +P A+VNFAAESHVDRSI G +FI TN++GTF LLE R +W LS + Sbjct: 65 SLVAELLAKHKPCAVVNFAAESHVDRSIHGPADFIQTNVVGTFHLLEAVRAYWGSLSLEN 124 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL K F+E PY P+SPYSA+KASSD+LV A+ HTYG+P L Sbjct: 125 RKDFRFLHVSTDEVYGSLGKTDAAFTETHPYAPNSPYSASKASSDHLVRAYHHTYGMPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YG G VRDWLYVEDH A+ VL+ G Sbjct: 185 TTNCSNNYGPHHFPEKLIPLVIHNALAGKPLPIYGTGHQVRDWLYVEDHCAAIRRVLEAG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YNIGG NE+ NI+IV + +LD P+ S+ + I +EDR GHD+RYAID+ Sbjct: 245 QVGEVYNIGGWNEKPNIEIVKTLCRMLDEKKPREDGKSYIDQIAHVEDRLGHDQRYAIDA 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI +++GW P+E E+G+ KTV WYLD+ W Sbjct: 305 TKIATQLGWKPKETFETGIEKTVNWYLDHQDW 336 >gi|121606380|ref|YP_983709.1| dTDP-glucose 4,6-dehydratase [Polaromonas naphthalenivorans CJ2] gi|120595349|gb|ABM38788.1| dTDP-glucose 4,6-dehydratase [Polaromonas naphthalenivorans CJ2] Length = 354 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 179/334 (53%), Positives = 227/334 (67%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TG AGFIG+ + V+ +DKLTYAGNL +L + F+Q DI Sbjct: 1 MTILITGAAGFIGANFVLDWLAQSSEPVINLDKLTYAGNLETLASLQGDARHIFVQGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + L QP A++NFAAESHVDRSI ++FI TNI+GTF LLE R +W L + Sbjct: 61 DSELVNRLLALHQPRAVLNFAAESHVDRSIHSPEDFIQTNIVGTFRLLESVRAYWGGLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K FRFL +STDEVYGSL D+ F+E Y P+SPYSA+KA+SD+LV A+ HTYG+P Sbjct: 121 EAKAAFRFLHVSTDEVYGSLGKDEPAFTETRRYEPNSPYSASKAASDHLVRAYHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV+DH A+ VL Sbjct: 181 VLTTNCSNNYGPCHFPEKLIPLMIVNALAGKALPVYGDGLQVRDWLYVKDHCSAIRRVLD 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G +GE YN+GG NE+ NI+IV + LLD L P++ S+ I ++DRPGHDRRYAI Sbjct: 241 AGALGEVYNVGGWNEKTNIEIVRTVCALLDELRPRADGASYAAQIASVKDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ E+GW P E ESG+ KTV WYL N W Sbjct: 301 DASKIERELGWRPAETFESGIRKTVEWYLANPEW 334 >gi|66044181|ref|YP_234022.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] gi|63254888|gb|AAY35984.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 366 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 176/343 (51%), Positives = 227/343 (66%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + + F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNGEPVLNLDALTYAGNLANLQSLEGNEQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L D Sbjct: 62 ALLDRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEADD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVQTLCTLLDELAPAAARQVINQKTGQPVSAYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVEWYLTNQKW 344 >gi|182415802|ref|YP_001820868.1| dTDP-glucose 4,6-dehydratase [Opitutus terrae PB90-1] gi|177843016|gb|ACB77268.1| dTDP-glucose 4,6-dehydratase [Opitutus terrae PB90-1] Length = 355 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 231/337 (68%), Gaps = 7/337 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL--KIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV 57 M L+VTGG GFIGS R + + +Q LV +D LTYAGN +L +++ + F Q Sbjct: 1 MNLLVTGGCGFIGSNFVRQRLFEPGSPLQRLVNLDALTYAGNPANLADLAADPRYVFAQG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + L E DA+VNFAAESHVDRSI + F+ TN++GT LL RL+W+ Sbjct: 61 DIGDATLVARLLDEHAIDAVVNFAAESHVDRSIDSPEPFVQTNVVGTLRLLNAARLYWTQ 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L +K FRFL +STDEVYG+L F+E+ PY P+SPY+A+KA+SD+LV A+ HTY Sbjct: 121 LPAARKGAFRFLHVSTDEVYGTLAPSDPAFTEETPYAPNSPYAASKAASDHLVRAYQHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P L +NCSNNYGPYHFPEKLIPL I +EG + +YGDG VRDWLYVEDH A++L Sbjct: 181 GLPTLTTNCSNNYGPYHFPEKLIPLVILNALEGKPLPVYGDGLQVRDWLYVEDHAAAIWL 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRR 293 VL++GR+GE YNIGG NE+ NI+IV I LLD P++ S+ I + DRPGHDRR Sbjct: 241 VLQRGRVGETYNIGGLNEQPNIEIVRAICRLLDRKSPRTDGKSYASQITHVTDRPGHDRR 300 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAID +K++ E+GW P+E+ +G+ KTV WYL W Sbjct: 301 YAIDCTKLQCELGWAPRESFATGIEKTVDWYLARRDW 337 >gi|323701366|ref|ZP_08113040.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323533625|gb|EGB23490.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 327 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 180/336 (53%), Positives = 238/336 (70%), Gaps = 13/336 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS R++ N+ I+V+ +DKLTYAGNL++LKE++ + F+Q DI Sbjct: 1 MKLLVTGGAGFIGSNFIRFMFNERPDIEVINLDKLTYAGNLDNLKELAGKPNYLFVQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ + DA++NFAAESHVDRSIL D FI TN++GT +LLE+ R W Sbjct: 61 ADGDLVQQLFGK-GIDAVINFAAESHVDRSILEPDVFIKTNVVGTQVLLEQARQSWRG-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+QISTDEVYGSL +G F+E P P+SPYSA+KA +D LV A+ HTYG+P Sbjct: 118 -SGGQRVRFIQISTDEVYGSLGAEGYFTESTPLAPNSPYSASKAGADLLVRAYYHTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I + ++ + +YG+G NVRDWL+VEDH RA+Y VL Sbjct: 177 VAITRCSNNYGPYQFPEKLIPLMILKALQDEPLPVYGNGLNVRDWLHVEDHCRAIYTVLT 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR GE YNIGGN ER N+++V I ++ P+S LI F++DRPGHD RYAID+ Sbjct: 237 QGRPGEVYNIGGNQERTNLEVVKGILNIMGK--PES-----LISFVQDRPGHDHRYAIDA 289 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+ E+GW P+ + SGL TV WYL+N WW PL Sbjct: 290 GKIQRELGWRPRHDFASGLANTVQWYLNNRQWWEPL 325 >gi|300313693|ref|YP_003777785.1| dTDP-glucose 4,6-dehydratase [Herbaspirillum seropedicae SmR1] gi|226726336|gb|ACO81757.1| RfbB [Herbaspirillum seropedicae SmR1] gi|300076478|gb|ADJ65877.1| dTDP-glucose 4,6-dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 338 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/327 (53%), Positives = 226/327 (69%), Gaps = 4/327 (1%) Query: 3 LIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L VTGGAGFIG+ + +L VL IDKLTYAGN ++L ++ + F Q DICD Sbjct: 2 LFVTGGAGFIGANYILHFLAAPHDEAVLNIDKLTYAGNPDNLASVAGDARYLFSQTDICD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + +P A+V+ AAESHVDRSI G FI TN+ GTF +L +WS L Sbjct: 62 TAAIARLFAQHRPRAVVHCAAESHVDRSIAGPAVFIQTNVNGTFSMLSAAYDYWSTLPAA 121 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ FRFL ISTDEV+GSL D F+E PY P+SPYSA+KA+SD+LV A+ TYG+PV Sbjct: 122 EQAAFRFLHISTDEVFGSLAADAPPFTETSPYAPNSPYSASKAASDHLVRAFHSTYGLPV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+++CSNNYGP+HFPEKLIPL IT + G + +YGDGQ VRDWL+V DH RA+ LVL + Sbjct: 182 LITHCSNNYGPFHFPEKLIPLVITNALAGQPLPIYGDGQQVRDWLHVADHCRAIELVLAR 241 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 R GE YNIGGN+E+ N+++V + LLD L PK+ + + I F++DRPGHDRRYA+D+ Sbjct: 242 ARPGESYNIGGNSEKTNLEVVLTLCDLLDELAPKAQGQYRDQICFVQDRPGHDRRYAVDT 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ GL +TV W+L Sbjct: 302 SKIQRELGWSPQHAFRQGLRQTVQWFL 328 >gi|114332356|ref|YP_748578.1| dTDP-glucose 4,6-dehydratase [Nitrosomonas eutropha C91] gi|114309370|gb|ABI60613.1| dTDP-glucose 4,6-dehydratase [Nitrosomonas eutropha C91] Length = 353 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 179/351 (50%), Positives = 241/351 (68%), Gaps = 9/351 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIG+ V + ++ +DKLTYAGNL++L ++ + F+Q DICD Sbjct: 4 ILITGGAGFIGTNFILDWVKNTDENIVNLDKLTYAGNLHNLVSLTNNPQHIFVQGDICDS 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I + L+ +QP AI++ AAESHVDRSI G + FI TNI GTF LLE R +W LS + Sbjct: 64 ERISTLLERYQPRAIIHMAAESHVDRSIHGPEYFIQTNITGTFRLLEAARHYWGDLSVSR 123 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ FRFL +STDEV+G+L D F+E+ + P+SPYSA+KASSD LV A+ HTYG+PVL Sbjct: 124 KENFRFLHVSTDEVFGTLTKDAPAFTENHCFQPNSPYSASKASSDCLVRAYHHTYGLPVL 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYG Y FPEKLIPL I + G + +YGDGQ +RDWLYV DH +A+ +VL+KG Sbjct: 184 TTHCSNNYGAYQFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVNDHCQAIRVVLEKG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YNIGG NE+ N++I+ I +L K Y LI + DRPGHDRRYAI++ K Sbjct: 244 QPGETYNIGGWNEKSNLEIIHTICDVLQQFQQKDYR--ALITHVADRPGHDRRYAINAHK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 I+ E+GW P E E+G+ KT+ WYL+N+ W E++ DY KW +N Sbjct: 302 IERELGWRPLETFETGIRKTIQWYLENHDW----VAEVQ-SGDYRKWVEIN 347 >gi|289678440|ref|ZP_06499330.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae FF5] Length = 366 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 175/343 (51%), Positives = 226/343 (65%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + + F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNGEPVLNLDALTYAGNLANLQSLEGNEQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ALLERLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETAD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KTAFRFLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVQTLCALLDELAPAAARQVINQKTGQPVSAYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVEWYLANQKW 344 >gi|187920921|ref|YP_001889953.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] gi|187719359|gb|ACD20582.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] Length = 353 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/331 (52%), Positives = 229/331 (69%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIG+ + +L IDKLTYAGN +L+ + F DI DR Sbjct: 2 IFVTGGAGFIGANFVIDWLAHHDEPILNIDKLTYAGNYGTLQALHDDPRHVFACRDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++++P A+V+FAAESHVDRSI EFI N+ GT LL+ RL+W LS + Sbjct: 62 TAMSAIFEQYRPRAVVHFAAESHVDRSIDRPREFIDANVTGTGELLDVARLYWERLSDAE 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRFL +STDEVYGSL + F+E PY P+SPY+A+KASSD++V A+ HTYG+P L Sbjct: 122 RNSFRFLHVSTDEVYGSLSANDAAFTETTPYAPNSPYAASKASSDHIVRAYHHTYGLPTL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I R + G + +YGDG+NVRDWLYV DH A+ VL +G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLMIQRALSGDALPVYGDGRNVRDWLYVRDHCDAIRTVLARG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGGNNE+ N+++V I LLDA+ P+ S S+ E I F+ DR GHDRRYAID++ Sbjct: 242 TPGETYNIGGNNEKTNVEVVHFICDLLDAIKPRESGSYREQIAFVTDRKGHDRRYAIDAT 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P+E SGL+ TV WY++N W Sbjct: 302 KLRRELGWVPRETFASGLSMTVQWYVENGAW 332 >gi|317484407|ref|ZP_07943322.1| dTDP-glucose 4,6-dehydratase [Bilophila wadsworthia 3_1_6] gi|316924326|gb|EFV45497.1| dTDP-glucose 4,6-dehydratase [Bilophila wadsworthia 3_1_6] Length = 352 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 173/332 (52%), Positives = 229/332 (68%), Gaps = 7/332 (2%) Query: 3 LIVTGGAGFIGS--ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIGS L R + +V+ +DKLTY+GN+ +L + F++ DI Sbjct: 4 VLVTGGAGFIGSCYVLSRRTAGE---RVVNLDKLTYSGNIGNLASLDGDAEHIFVRGDIG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L +QPDA++NFAAESHVDRSI D F+ TN++GT LL WW LS+ Sbjct: 61 DALLVRQLLHHYQPDAVINFAAESHVDRSIHDPDAFVRTNVLGTCTLLRGVLEWWKELSE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++++ FRFL +STDEVYG+L G F+E PY P+SPYSA+KASSD+ V A+ TYG+P Sbjct: 121 ERRNAFRFLHVSTDEVYGTLRPGEPAFTETTPYAPNSPYSASKASSDHFVRAYHETYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGP FPEKLIPL I + G + +YG G+N+RDWL+VEDH A+ VL+ Sbjct: 181 TLITNCSNNYGPRQFPEKLIPLVILNALSGKPLPIYGTGENIRDWLHVEDHCEAIVAVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YNIGG++ER NID+V I +LD L P + + + I F+ DRPGHD RYAID+ Sbjct: 241 KGAPGECYNIGGHSERANIDVVRSICRILDKLRPTAAPYEKQITFVADRPGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI+ EIGW P+ E GL +TV WYL+N W Sbjct: 301 AKIEQEIGWVPRRRFEEGLRETVGWYLENAAW 332 >gi|317968492|ref|ZP_07969882.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CB0205] Length = 368 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 229/339 (67%), Gaps = 3/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 R++VTGGAGFIG A+ R L+ + IQV +DK YA +L +++ ++ LQVD Sbjct: 10 QRVLVTGGAGFIGGAVVRRLLAETNIQVFNLDKCGYASDLTGIEQFGETAAQRHQLLQVD 69 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E +A+++ PD +++ AAESHVDRSI G F+++N++GTF +L+ R + L Sbjct: 70 LSDAEATTAAVRQADPDLVMHLAAESHVDRSIDGPGVFVSSNVLGTFNMLQAARAHFEQL 129 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ FRF ISTDEV+GSL ++G FSE PY+P SPYSA+KA+SD+LV AW H+YG+ Sbjct: 130 PAEQAQAFRFHHISTDEVFGSLGEQGRFSETTPYDPRSPYSASKAASDHLVSAWHHSYGL 189 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+++NCSNN+GP+ FPEKLIP+ I + + G + LYGDG NVRDWLYVEDHV AL L Sbjct: 190 PVVVTNCSNNFGPWQFPEKLIPVVILKAVAGEPIPLYGDGGNVRDWLYVEDHVDALLLAA 249 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G+ G Y +GG ER N +V I LLD +P+ H LI + DRPGHDRRYAID Sbjct: 250 TQGQPGRSYCVGGYGERTNKQVVEAICTLLDQRLPQGAPHARLITPVTDRPGHDRRYAID 309 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +I+ E+GW P+ E GL TV WYLD+ W + + + Sbjct: 310 PGRIEQELGWTPRHPFEQGLAATVDWYLDHLGWCQAMRQ 348 >gi|330975553|gb|EGH75619.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 366 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 175/343 (51%), Positives = 226/343 (65%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + + F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNGEPVLNLDALTYAGNLANLQSLEGNEQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ALLDRLFTEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETAD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVQTLCTLLDELAPAAARQVINQKTGQPVSAYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVEWYLTNQKW 344 >gi|213865072|ref|ZP_03387191.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 295 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 164/294 (55%), Positives = 217/294 (73%), Gaps = 10/294 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG----------LFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYV 294 >gi|124265821|ref|YP_001019825.1| dTDP-glucose 4,6-dehydratase [Methylibium petroleiphilum PM1] gi|124258596|gb|ABM93590.1| dTDP-glucose 4,6-dehydratase [Methylibium petroleiphilum PM1] Length = 357 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 174/333 (52%), Positives = 226/333 (67%), Gaps = 3/333 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + V+ +D L+Y+GNL +L + + F++ DI DR Sbjct: 2 ILVTGGAGFIGSNFVLDWIASTDEPVVNLDVLSYSGNLRNLASLQGNARHVFVRGDIRDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + +P AIV+ AAESHVDRSI G F+ TN+ G+F+LLE R +WS L+ + Sbjct: 62 PLLDRLLADHRPRAIVHLAAESHVDRSIHGPGAFLHTNVEGSFVLLEAARAYWSGLAAGR 121 Query: 123 KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRFL +STDEV+GSL+ G F+E Y+PSSPY+A+KA+SD+L AW TY +PV+ Sbjct: 122 RESFRFLHVSTDEVFGSLEPGAPAFTETHAYDPSSPYAASKAASDHLARAWHRTYDLPVV 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWL+V DH RAL VL++G Sbjct: 182 TSNCSNNYGPYHFPEKLIPLTIVNALAGQTLPVYGDGLQIRDWLHVGDHCRALRTVLERG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 R+GE YNIGG +E NID V + LLD L P E LIR + DRPGHDRRYAID+ Sbjct: 242 RVGETYNIGGGSEFANIDTVRRVCALLDELQPDPAGPYERLIRLVADRPGHDRRYAIDTR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI+ E+GW P E E+GL KTV WYL + W R Sbjct: 302 KIERELGWRPTETFETGLRKTVQWYLAHAGWVR 334 >gi|296132426|ref|YP_003639673.1| dTDP-glucose 4,6-dehydratase [Thermincola sp. JR] gi|296031004|gb|ADG81772.1| dTDP-glucose 4,6-dehydratase [Thermincola potens JR] Length = 347 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 184/354 (51%), Positives = 242/354 (68%), Gaps = 13/354 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS V + + DKLTYA NL +LK I + F++ DI Sbjct: 1 MKILVTGGAGFIGSNFLNLFVPRYPDCRFINFDKLTYAANLLNLKNIQVKQNYVFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + ++++PD +V+FAAESHVDRSILG +FI TNI+GTF LLE R +W Sbjct: 61 ADYAAVAAVFEKYEPDIVVHFAAESHVDRSILGPADFINTNILGTFNLLEACRKYWG--- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ + F +STDEVYGSL + G F+E+ Y+PSSPYSA+KASSD+LV A+ TYG+P Sbjct: 118 -DRPGKL-FHHVSTDEVYGSLGETGYFTEETRYDPSSPYSASKASSDHLVRAYHRTYGLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NCSNNYGPY FPEKLIPL I +EG + +YG G+NVRDWL+VEDH A++ V++ Sbjct: 176 VKVTNCSNNYGPYQFPEKLIPLMILHALEGKSLPVYGTGENVRDWLFVEDHCEAIWTVIE 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAID 297 KG +GE YNIGGNN+ KNIDIV +I LL + K +LI F++DRPGHD RYAID Sbjct: 236 KGNVGETYNIGGNNQWKNIDIVHKICDLLGEKLDKDPQEFKKLITFVKDRPGHDLRYAID 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 ++KI+ ++GW P+E E+GLNKT+ WYL N W E DY KW +N Sbjct: 296 ATKIRDQLGWEPRETFETGLNKTIDWYLHNKDW-----VESVKTGDYKKWLEMN 344 >gi|148241183|ref|YP_001226340.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RCC307] gi|147849493|emb|CAK26987.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RCC307] Length = 361 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 230/331 (69%), Gaps = 2/331 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-NLFSFLQVDIC 60 R++VTGGAGFIG A+ R L++D V +DK YA +L S++ + ++ LQ+D+ Sbjct: 12 RVLVTGGAGFIGGAVVRRLLSDSDALVFNLDKCGYASDLASIEALPEAKGRHQLLQLDLA 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +A+++ PD +++ AAESHVDRSI G FI++N+ GTF LL+ R W LS+ Sbjct: 72 DAEATAAAVQQADPDLVMHLAAESHVDRSIDGPGAFISSNVNGTFALLQAARSHWEGLSE 131 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++ +FRF ISTDEV+GSL G FSE PY+P SPYSA+KA+SD+LV AW HTYG+PV Sbjct: 132 ERRSRFRFHHISTDEVFGSLGATGRFSESTPYDPRSPYSASKAASDHLVNAWHHTYGLPV 191 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYGP+ FPEKLIP+ I + I G + LYGDG NVRDWLYVEDHV AL L + Sbjct: 192 VLTNCSNNYGPWQFPEKLIPVVILKAIAGEPIPLYGDGANVRDWLYVEDHVDALLLAATR 251 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++G Y +GG+ ER N ++V I LLD P+ H LI + DRPGHDRRYAID + Sbjct: 252 GQLGASYCVGGHGERSNREVVETICQLLDERRPEGAPHARLITRVADRPGHDRRYAIDPA 311 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +I SE+GW P+ + +GL TV WYL N W Sbjct: 312 RISSELGWQPRHDFNAGLAATVDWYLQNQQW 342 >gi|330899785|gb|EGH31204.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 366 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 174/343 (50%), Positives = 226/343 (65%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + + F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNGEPVLNLDALTYAGNLANLQSLEGNEQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ALLDRLFTEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETTD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KAAFRFLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LL+ L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVQTLCALLEELAPAAARQIINQKTGQPVSAYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E E+G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFETGIRKTVEWYLTNQKW 344 >gi|320325878|gb|EFW81938.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. B076] Length = 366 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 174/343 (50%), Positives = 227/343 (66%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + ++ F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNDEPVLNLDALTYAGNLANLQSLEGNDQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ELLTRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL + TDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KTAFRFLHVYTDEVYGTLGANDPAFTETTPYLPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVHTLCALLDELAPAAARQVINQKTGELVSNYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ KI+ E+GW P E ++G+ KTV WYL N W Sbjct: 302 PGHDRRYAIDARKIERELGWKPAETFDTGIRKTVEWYLTNQKW 344 >gi|190890471|ref|YP_001977013.1| dTDP-glucose 4,6-dehydratase [Rhizobium etli CIAT 652] gi|190695750|gb|ACE89835.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CIAT 652] Length = 351 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 175/332 (52%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +D LTYAGNL +L I F++ I D Sbjct: 2 ILVTGGAGFIGANFVLDWLALHDEPVVNLDALTYAGNLENLNSIWSDPRHVFVKGSIADY 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+ QP AI+NFAAESHVDRSI G +EFI TNIIGTF LLE R + + ++D Sbjct: 62 DLVDPLLRAHQPRAILNFAAESHVDRSIHGPEEFIQTNIIGTFRLLEAIRGFLASQNEDF 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRFL +STDEVYGSL D+ FSE Y P+SPYSA+KA+SD+LV A+ HTYG+PVL Sbjct: 122 RESFRFLHVSTDEVYGSLAPDEAAFSEHRKYEPNSPYSASKAASDHLVRAYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWL+V+DH A+ VL++G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIHNALSGKQIPIYGDGMQVRDWLFVKDHCSAIRRVLERG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE N+ +V + +LD L +P S+ I F+ DRPGHDRRYAID+ Sbjct: 242 KVGETYNVGGRNELTNLSVVNTLCEILDELRPLPNGASYKAQISFVRDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI+ E+ W P E E+G+ KTV WYL N W Sbjct: 302 AKIERELDWRPSETFETGIRKTVEWYLANAAW 333 >gi|254496076|ref|ZP_05108977.1| dTDP-glucose 4,6-dehydratase [Legionella drancourtii LLAP12] gi|254354718|gb|EET13352.1| dTDP-glucose 4,6-dehydratase [Legionella drancourtii LLAP12] Length = 339 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 182/330 (55%), Positives = 228/330 (69%), Gaps = 6/330 (1%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS +LV++ + V+ +DKLTYAGNL +LK I + F+ DI Sbjct: 6 MTILVTGGAGFIGSNFVLDWLVSNDE-PVINVDKLTYAGNLANLKRIESDPRYIFIHADI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + L AI++FAAESHVDRSI G +FI TNI+GTF LLE R +W LS Sbjct: 65 SDAERLDQLLVAHNVRAIIHFAAESHVDRSIHGPADFIQTNIVGTFHLLEVARNYWHHLS 124 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 KD FRFL +STDEVYGSL G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+ Sbjct: 125 SPLKDDFRFLHVSTDEVYGSLAPGAPAFTEMHRYEPNSPYSASKAASDHLVRAYYHTYGL 184 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL +NCSNNYGPY +PEKLIPL I + G + +YGDGQ +RDWLYV DH A+ VL Sbjct: 185 PVLTTNCSNNYGPYQYPEKLIPLCIKNALAGKPLPIYGDGQQIRDWLYVTDHCAAIRTVL 244 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 GR+GE YNIGG NE+ N+++V I LLD L P+ + S+T I ++ DR GHDRRYA Sbjct: 245 AHGRLGEVYNIGGWNEKPNLEVVHTICALLDELAPRRDAQSYTSQISYVADRAGHDRRYA 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID++KI E+ W P E ESG+ KTV WYL Sbjct: 305 IDATKIAHELDWKPSETFESGIRKTVQWYL 334 >gi|30248485|ref|NP_840555.1| NAD-dependent epimerase/dehydratase family protein [Nitrosomonas europaea ATCC 19718] gi|30138371|emb|CAD84380.1| NAD dependent epimerase/dehydratase family [Nitrosomonas europaea ATCC 19718] Length = 352 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 177/332 (53%), Positives = 227/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + + V+ +D LTYAGN +L + + F++ I D Sbjct: 2 ILVTGGAGFIGSNFVLDWLAQSEETVINLDALTYAGNRANLASLEGDSRHIFVKGSITDF 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E P A++NFAAESHVDRSI G + FI TNI+GTF LLE R +W+ L + Sbjct: 62 DLVARLLHEHHPRAVINFAAESHVDRSIHGPENFIHTNIVGTFRLLECVRAFWNDLREPD 121 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L K F+E Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 QQDFRFLHVSTDEVYGTLSKEASPFTEVSRYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG +RDWLYV+DH A+ VL+ G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVKDHCGAIRRVLEVG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 + GE YNIGG NE+ NI+IV + LLD L PK+ S+ I ++ DRPGHDRRYAID+ Sbjct: 242 KPGEIYNIGGWNEKPNIEIVNTVCKLLDELRPKADGTSYASQITYVADRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+GW P E E+G+ KTV WYLDN W Sbjct: 302 HKIERELGWRPAETFETGIRKTVQWYLDNPEW 333 >gi|209545108|ref|YP_002277337.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|209532785|gb|ACI52722.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 356 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 223/337 (66%), Gaps = 3/337 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSA+ R+++ V+ +D LTYA L S EIS + ++ DI Sbjct: 1 MRILVTGGCGFIGSAVVRHIIGGTGHSVVNVDSLTYAATLESTAEISSDPRYVHVRADIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+ QPDA+++ AAESHVDRSI G F+ TN++GT+ LL+ R +WS L Sbjct: 61 DGAAMRAVFAAHQPDAVMHLAAESHVDRSIDGPGVFVQTNVVGTYTLLDTAREYWSGLDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FRF +STDEV+G+L G F+E PY+P SPYSA+KA+SD+LV AW HTYG+P Sbjct: 121 AGRAAFRFHHVSTDEVFGTLQPGDAPFTESTPYDPRSPYSASKAASDHLVRAWQHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL I G + +YGDG N+RDWL+V+DH AL L ++ Sbjct: 181 TFVTNTTNNYGFWHFPEKLIPLVTINAIGGRALPVYGDGANMRDWLFVDDHAEALVLAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAID 297 +G+ GE Y IG R N+D+V I +LD L P + H LIRF+ DRPGHD RY ID Sbjct: 241 RGQPGETYAIGARQPRSNLDVVRAICTVLDDLRPDPAGPHARLIRFVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 S+ ++ +GW + + E+G+ +TV WYLD+ WW L Sbjct: 301 PSRAEAALGWRARHDFETGIRRTVQWYLDHQDWWTAL 337 >gi|254410621|ref|ZP_05024400.1| dTDP-glucose 4,6-dehydratase [Microcoleus chthonoplastes PCC 7420] gi|196182827|gb|EDX77812.1| dTDP-glucose 4,6-dehydratase [Microcoleus chthonoplastes PCC 7420] Length = 357 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 177/339 (52%), Positives = 233/339 (68%), Gaps = 9/339 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TGGAGFIGS + + +V+V+D L+YAGN +L+ + F F+ DIC Sbjct: 8 RILITGGAGFIGSNFVHHWCDRYPDDRVVVLDLLSYAGNRRNLESVEGRENFRFVAGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L+ D + +FAAESHVDRSILG + F+ TN++GT LLE R W Sbjct: 68 DRTLVDALLRSETIDTVAHFAAESHVDRSILGPEAFVRTNVLGTSTLLEAFRQHWKKRGD 127 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D RFL +STDEVYGSL + LFSE PY P+SPY+A+KA SD++V A+ HTYG+P Sbjct: 128 RGSD--RFLHVSTDEVYGSLSPNDPLFSETTPYQPNSPYAASKAGSDHIVRAYHHTYGVP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++NCSNNYGPY FPEKLIPL ++ G + +YGDGQ+VRDWLYV DH +A+ LVL Sbjct: 186 TLITNCSNNYGPYQFPEKLIPLMCINIMLGQPLPVYGDGQHVRDWLYVNDHCQAIDLVLH 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSHTELIRFIEDRPGHDRRYA 295 +G GE YNIGGNN+ KN+D+V + L+D L +P S S +LI F++DRPGHDRRY Sbjct: 246 QGTPGETYNIGGNNQIKNLDLVQMVCQLMDELASDLPVSPS-KKLISFVKDRPGHDRRYG 304 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+ KIK+++GW PQE +E GL TV WYL + WW PL Sbjct: 305 IDARKIKAKLGWTPQETIEGGLRSTVEWYLTHRDWWEPL 343 >gi|37520037|ref|NP_923414.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] gi|35211029|dbj|BAC88409.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] Length = 360 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 177/353 (50%), Positives = 234/353 (66%), Gaps = 8/353 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ ++ ++ +DKLTYAGN +L + F++ DICD Sbjct: 6 ILVTGGAGFIGANFVCAWLSRHNGTLVNLDKLTYAGNPANLHALQADPRHVFVRGDICDP 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I L F+P IVNFAAESHVDRSI D F+ TN+ G F+LLE W L+Q + Sbjct: 66 ELIAQLLARFRPRYIVNFAAESHVDRSIHSPDAFVKTNVDGVFLLLEAALHHWKQLTQPE 125 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFLQ+STDEVYGSL ++ FSE PY P+SPY+A+KA+ D+LV A+ TYG+PVL Sbjct: 126 VEDFRFLQVSTDEVYGSLSAEESAFSETTPYRPNSPYAASKAAGDHLVRAYHRTYGLPVL 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY PEKLIPL + + G + +YGDG N+RDWL+VEDH RA+ VL G Sbjct: 186 TTNCSNNYGPYQHPEKLIPLMLLNALAGKALPVYGDGANIRDWLFVEDHCRAIERVLDSG 245 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 G+ YN+GG+NE+ N++++ + +LD P+ S S+ E IRF+ DRPGHDRRYAID+ Sbjct: 246 TPGQTYNVGGHNEKTNLEVIRTLCAILDQERPRLGSGSYREQIRFVADRPGHDRRYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 SKI E+GW P E+ ESG+ KTV WYL + W E DY +W +N Sbjct: 306 SKIGRELGWKPVESFESGIRKTVHWYLSQHRDW----VEQVLSGDYKEWFAIN 354 >gi|78184211|ref|YP_376646.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CC9902] gi|78168505|gb|ABB25602.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CC9902] Length = 375 Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 164/344 (47%), Positives = 230/344 (66%), Gaps = 7/344 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSF 54 R++VTGGAGFIG A+ R L+ + V +DK+ YA +L S++E+ Sbjct: 16 QRILVTGGAGFIGGAVVRRLLRESDAVVFNLDKMGYASDLTSIEEVIKELGVEHQQRHQL 75 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+CD + + A+++ PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R Sbjct: 76 QPIDLCDADAVEKAVQQANPDLVMHLAAESHVDRSISGPGVFIESNVTGTYNLLQSVRSH 135 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + L ++++QFR ISTDEV+GSL + G FSE PY+P SPYSA+KA+SD+LV AW H Sbjct: 136 FEQLPPERREQFRLHHISTDEVFGSLGREGRFSETTPYDPRSPYSASKAASDHLVQAWHH 195 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+PV+L+NCSNNYGP+ FPEKLIP+ + G + LYGDG N+RDWLYVEDHV AL Sbjct: 196 TFGLPVVLTNCSNNYGPWQFPEKLIPVVALKAAAGDSIPLYGDGLNIRDWLYVEDHVDAL 255 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L +G G Y +GG+ E+ N ++V I D P+S H +LI+ ++DRPGHDRR Sbjct: 256 LLAACRGTSGRSYCVGGHGEKTNQEVVNAICHQFDQERPESAPHAKLIQRVKDRPGHDRR 315 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 YAID S+I +E+GW P+ N+E GL +TV WYL + W + + K+ Sbjct: 316 YAIDPSRISTELGWQPRHNVEEGLAETVAWYLSHQDWCQTVRKQ 359 >gi|15602895|ref|NP_245967.1| RffG [Pasteurella multocida subsp. multocida str. Pm70] gi|12721362|gb|AAK03114.1| RffG [Pasteurella multocida subsp. multocida str. Pm70] Length = 345 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 165/339 (48%), Positives = 232/339 (68%), Gaps = 14/339 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSA+ RY+++ Q++ +DKLTYA NL++L + + + F Q DI D Sbjct: 3 KILITGGAGFIGSAVIRYILSQTSDQIINLDKLTYASNLDALATVVDNPRYHFEQGDIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + +QPD +++ AAESHVDRSI GA FI TNI+GT+ LLE R +W L + Sbjct: 63 ATTLSNIFQRYQPDCVMHLAAESHVDRSIAGAAAFIQTNIVGTYTLLEVARQYWLTLDEK 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF +STDEV+G LD + F+E PY PSSPYSA+KA+SD+LV AW TYG+P+ Sbjct: 123 SKAAFRFHHVSTDEVFGDLDFTQPAFTETSPYRPSSPYSASKAASDHLVRAWHRTYGLPI 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SN +NNYG Y EKLIP +++ ++G + LYGDGQ VRDWL+V+DH +ALYLVL K Sbjct: 183 VMSNSTNNYGFYQHTEKLIPFMLSQALQGKPLTLYGDGQQVRDWLFVDDHAQALYLVLTK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL------------IPKSYSHTELIRFIEDR 287 G++GE YNIG E NI +V + +L+ L + + +LI F++DR Sbjct: 243 GKVGETYNIGARCEYSNIHLVMRLCEILNQLRQAGGLTAFSDQLSEITDFKQLITFVKDR 302 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PGHD RYAI++SKI+ E+GW + + E+GL KTV WY+D Sbjct: 303 PGHDLRYAINASKIQDELGWVAKTDFETGLRKTVAWYVD 341 >gi|297569757|ref|YP_003691101.1| dTDP-glucose 4,6-dehydratase [Desulfurivibrio alkaliphilus AHT2] gi|296925672|gb|ADH86482.1| dTDP-glucose 4,6-dehydratase [Desulfurivibrio alkaliphilus AHT2] Length = 352 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 173/332 (52%), Positives = 222/332 (66%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +DKLTYAGN +L + + F + DI D Sbjct: 2 IVVTGGAGFIGANFIIDWLAAEDEPVVNLDKLTYAGNPENLAGVVSDPRYHFARGDIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L E +P A++NFAAESHVDRSI G +FI TN+ GT+ LLE R WW+ Sbjct: 62 ELVGRLLAEHRPRAVINFAAESHVDRSIHGPADFINTNVTGTYQLLEAVRSWWAQQPAPA 121 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +D FRFL ISTDEVYGSL+ + F+E+ P P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RDSFRFLHISTDEVYGSLEPNEPPFTEEHPCRPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP FPEKLIPL I + G + +YGDG+ VRDWLYV DH +A+ VL G Sbjct: 182 TTNCSNNYGPCQFPEKLIPLIIHNALAGKPLPVYGDGRQVRDWLYVSDHCQAIRRVLAAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 R+GE YN+GGN E N+++V ++ +LD L P+ E I + DRPGHDRRYAID+ Sbjct: 242 RVGEIYNVGGNCELTNLEVVRQVCAILDELRPRPDGRPFAEQITHVTDRPGHDRRYAIDT 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P E+ GL KTV WYL+N W Sbjct: 302 GKIARELGWQPAESFAGGLRKTVQWYLENQQW 333 >gi|254431537|ref|ZP_05045240.1| dTDP-glucose 4,6-dehydratase [Cyanobium sp. PCC 7001] gi|197625990|gb|EDY38549.1| dTDP-glucose 4,6-dehydratase [Cyanobium sp. PCC 7001] Length = 367 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 168/336 (50%), Positives = 221/336 (65%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGGAGFIG A+ R L+ + V +DK YA +L S++ + + L Sbjct: 13 RVLVTGGAGFIGGAVVRRLLAESAATVFNLDKCGYASDLTSIEAVLAGMGAAAEGRHQLL 72 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +VD+ D E +A+++ PD +++ AAESHVDRSI G FI +N+ GTF LL+ R Sbjct: 73 RVDLTDPEATAAAVRQADPDLVMHLAAESHVDRSIEGPGAFIASNVSGTFHLLQAVRAHH 132 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L++ ++ FRF ISTDEV+GSL + G FSE PY+P SPYSA+KA+SD+LV AW HT Sbjct: 133 EGLNEGRRAAFRFHHISTDEVFGSLGETGRFSETTPYDPRSPYSASKAASDHLVSAWHHT 192 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV+L+NCSNNYGP+ FPEKLIP+ I + G + LYGDG NVRDWLYVEDHV AL Sbjct: 193 YGLPVVLTNCSNNYGPWQFPEKLIPVVILKAAAGEPIPLYGDGANVRDWLYVEDHVDALL 252 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L +G++G Y +GG+ ER N +V I LLD L P H LI + DRPGHDRRY Sbjct: 253 LAATQGQLGRSYCVGGHGERTNKQVVEAICSLLDQLRPAGAPHAGLITRVTDRPGHDRRY 312 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID ++I E+GW P+ GL TV WYL++ W Sbjct: 313 AIDPARISGELGWQPRHAFAQGLEATVRWYLEHQGW 348 >gi|254523027|ref|ZP_05135082.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas sp. SKA14] gi|219720618|gb|EED39143.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas sp. SKA14] Length = 326 Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 166/308 (53%), Positives = 217/308 (70%), Gaps = 3/308 (0%) Query: 26 IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESH 85 ++V+ +D LTYAGNL +L + + F+Q DI D + L E QPDA++NFAAESH Sbjct: 1 MKVINLDVLTYAGNLKTLSSLDGNPDHVFVQGDIGDSALVARLLAEHQPDAVLNFAAESH 60 Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGL 144 VDRSI G FI TN++GT LLE R +W L ++ FRFL +STDEVYG+L + G Sbjct: 61 VDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPAEQGSAFRFLHVSTDEVYGTLGETGK 120 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 FSE PY P+SPYSA+KA+SD+LV A+ HTYG+PVL +NCSNNYGPYHFPEKLIPL I + Sbjct: 121 FSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIAK 180 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 + G + +YGDG+ VRDWL+V DH A+ VL KG++GE YN+GGN+E++NI++V I Sbjct: 181 ALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGQVGETYNVGGNSEKQNIEVVQAIC 240 Query: 265 FLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 LLD P+ + I ++ DRPGHDRRYAID+SK+K+++GW P E G+ TV Sbjct: 241 ALLDQRRPREDGQPRSSQITYVADRPGHDRRYAIDASKLKNDLGWEPAYTFEQGIAFTVD 300 Query: 323 WYLDNNWW 330 WYLDN W Sbjct: 301 WYLDNQEW 308 >gi|213421875|ref|ZP_03354941.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 277 Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 161/274 (58%), Positives = 205/274 (74%), Gaps = 2/274 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLEQVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 G +GE YNIGG+NERKN+D+V I LL+ L P+ Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEELAPQ 276 >gi|301632561|ref|XP_002945351.1| PREDICTED: dTDP-glucose 4,6-dehydratase-like [Xenopus (Silurana) tropicalis] Length = 356 Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 176/335 (52%), Positives = 231/335 (68%), Gaps = 10/335 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++++ L Q V+ +DKLTYAGNL++L + F+Q DI Sbjct: 2 ILVTGGAGFIGA---NFVLDWLACQDEAVVNLDKLTYAGNLHNLDSLRGDARHVFVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L +P A+V+FAAESHVDRSI G ++FI TN++GTF LLE R +W L Sbjct: 59 GDHALLERLLAAQRPRAVVHFAAESHVDRSIHGPEDFIQTNVLGTFRLLEAVRHYWQALP 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K FRFL +STDEVYG+L F+ED P+SPYSA+KA+SD+LV AW HTYG+ Sbjct: 119 AMEKGAFRFLHVSTDEVYGTLAPTDPAFTEDHRIEPNSPYSASKAASDHLVRAWHHTYGL 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL ++CSNNYGP HFPEKLIPL I + G + +YGDG +RDWLYV DH A+ VL Sbjct: 179 PVLTTHCSNNYGPLHFPEKLIPLMIVNALAGKSLPVYGDGMQIRDWLYVRDHCSAIRRVL 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 GR+GE YNIGG NE+ NI+IV+ + LLDAL P++ S+ I ++DR GHDRRYA Sbjct: 239 AAGRLGETYNIGGWNEKTNIEIVYTVCALLDALRPRADGQSYRAQISHVKDRVGHDRRYA 298 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+ KI+ E+GW P E +SG+ KTV WYL++ W Sbjct: 299 IDARKIERELGWKPAETFDSGIRKTVQWYLEHPEW 333 >gi|327189972|gb|EGE57096.1| putative dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CNPAF512] Length = 351 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 172/332 (51%), Positives = 228/332 (68%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + V+ +D LTYAGNL +L I F++ I D Sbjct: 2 ILVTGGAGFIGANFVLDWLALHDEPVVNLDALTYAGNLENLNSIWSDPRHVFVKGSIADY 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + L+ QP AI+NFAAESHVDRSI G +EFI TNI+GTF LLE R + + ++D Sbjct: 62 DLVDALLRAHQPRAILNFAAESHVDRSIHGPEEFIQTNIVGTFRLLEAIRGFLASQNEDF 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ FRFL +STDEVYGSL D+ FSE Y P+SPYSA+KA+SD+LV + HTYG+PVL Sbjct: 122 RESFRFLHVSTDEVYGSLAPDEAAFSEHRKYEPNSPYSASKAASDHLVRTYHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWL+V+DH A+ VL++G Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIHNALSGKQIPIYGDGMQVRDWLFVKDHCSAIRRVLERG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYAIDS 298 ++GE YN+GG NE N+ +V + +LD L +P S+ I F+ DRPGHDRRYAID+ Sbjct: 242 KVGETYNVGGRNELTNLSVVNTLCEILDELRPLPNGASYKAQISFVRDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI+ E+ W P E ++G+ KTV WYL N W Sbjct: 302 AKIERELDWRPSETFDTGIRKTVEWYLANAAW 333 >gi|320330329|gb|EFW86312.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. race 4] Length = 366 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/343 (50%), Positives = 226/343 (65%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + ++ F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNDEPVLNLDALTYAGNLANLQSLEGNDQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ELLTRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATD 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL + TDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL Sbjct: 122 KTAFRFLHVYTDEVYGTLGANDPAFTETTPYLPNSPYSASKAASDHLVRSYHHTYGMPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G Sbjct: 182 TTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDR 287 +GE YNIGG NE+ NIDIV + LLD L P + ++ ELI ++ DR Sbjct: 242 ALGETYNIGGWNEKANIDIVHTLCALLDELAPAAARQVINQKTGELVSNYAELITYVTDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGH RRYAID+ KI+ E+GW P E ++G+ KTV WYL N W Sbjct: 302 PGHVRRYAIDARKIERELGWKPAETFDTGIRKTVEWYLTNQKW 344 >gi|121607691|ref|YP_995498.1| dTDP-glucose 4,6-dehydratase [Verminephrobacter eiseniae EF01-2] gi|121552331|gb|ABM56480.1| dTDP-glucose 4,6-dehydratase [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 176/332 (53%), Positives = 225/332 (67%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKL+YAGNL++L+ + Q F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLASSDEPVLNLDKLSYAGNLHNLEGLRQDPRHRFVQGDIGDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L E QP AIV+FAAESHVDRSI G ++FI TNI+GTF LLE R + + L Sbjct: 62 ALLAGLLAEHQPRAIVHFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRRYGAALPDRA 121 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RFLQ+STDEVYGSL + F+E + P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RQGLRFLQVSTDEVYGSLAPREPAFAETRAFQPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++CSNNYGP FPEKLIPL I + G + +YGDG RDWLYV+DH A+ VL+ G Sbjct: 182 TTHCSNNYGPLQFPEKLIPLMIVNALGGQPLPVYGDGLQRRDWLYVKDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 ++G Y+IGG NE+ NIDIV I LLDAL P+ S+ I ++DRPGHDRRYAID+ Sbjct: 242 QVGHSYHIGGGNEQANIDIVHSICTLLDALRPRPDGQSYLSQIAHVQDRPGHDRRYAIDA 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P E SG+ KTV WYL++ W Sbjct: 302 RKIGRELGWQPAETWASGIRKTVQWYLEHPQW 333 >gi|297569788|ref|YP_003691132.1| dTDP-glucose 4,6-dehydratase [Desulfurivibrio alkaliphilus AHT2] gi|296925703|gb|ADH86513.1| dTDP-glucose 4,6-dehydratase [Desulfurivibrio alkaliphilus AHT2] Length = 360 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 176/338 (52%), Positives = 226/338 (66%), Gaps = 10/338 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + + VL +DKLTYAGN +L ++ + F+ DI D Sbjct: 2 ILVTGGAGFIGANFILDWLAEEGEPVLNLDKLTYAGNRENLAGVADDPRYRFVHGDIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL---- 118 E + L +P A++NFAAESHVDRSI G FI TN+ GT LLE R +W L Sbjct: 62 ELVAGLLARHRPRAVINFAAESHVDRSIHGPAAFIETNVAGTSRLLEVVRDYWGGLPLTP 121 Query: 119 --SQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 S + +FRFL ISTDEVYGSL F+E+ PY P+SPYSA+KA+SD+LV AW HT Sbjct: 122 GPSPVGRGEFRFLHISTDEVYGSLAPAEPPFTENHPYQPNSPYSASKAASDHLVRAWHHT 181 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PVL +NCSNNYGPY FPEKLIPL I + G + +YGDG VRDWLYV DH RA+ Sbjct: 182 YGLPVLTTNCSNNYGPYQFPEKLIPLVIHNALAGQPLPIYGDGLQVRDWLYVGDHCRAIR 241 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDR 292 VL+ GR+GE YN+GG+NE N+ +V I LLD L P++ S++ + + DRPGHDR Sbjct: 242 RVLQAGRVGEVYNVGGHNELTNLQVVEAICALLDELRPRADGRSYSAQMTHVPDRPGHDR 301 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID+ KI+ E+GW P E+ +G+ KTV WYLD+ W Sbjct: 302 RYAIDAGKIERELGWKPAESFATGIRKTVQWYLDHQGW 339 >gi|313673140|ref|YP_004051251.1| dtdp-glucose 4,6-dehydratase [Calditerrivibrio nitroreducens DSM 19672] gi|312939896|gb|ADR19088.1| dTDP-glucose 4,6-dehydratase [Calditerrivibrio nitroreducens DSM 19672] Length = 371 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 178/340 (52%), Positives = 236/340 (69%), Gaps = 12/340 (3%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQS------NLFS 53 +++TGGAGFIGS + RYL+++ K V+ +D LTYAGNL SL ++ +S + Sbjct: 7 ILITGGAGFIGSNMIRYLLSEESGFKGVVINVDLLTYAGNLESLIDVEKSFGGGSNPRYK 66 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F++ DI DR I + K + D +++FAAESHVDRSILG + FITTN++GT+ LL+ R Sbjct: 67 FVKADIRDRSAIENIFKNYNVDCVIHFAAESHVDRSILGPEAFITTNVLGTYTLLDVARK 126 Query: 114 WWSCLSQDKKDQ-FRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 +W + D F ISTDEVYGSL D G F+E+ PY+P SPYSA+KA SD+LV+A+ Sbjct: 127 YWQEIYGTLSDAPVLFHHISTDEVYGSLGDTGYFTENTPYDPRSPYSASKAGSDHLVMAY 186 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 HTYG+PV L+NCSNNYGPY FPEK IPL I MIE + +YGDG+N+RDWLYVEDH Sbjct: 187 HHTYGLPVTLTNCSNNYGPYQFPEKFIPLMILNMIEDKPLPVYGDGKNIRDWLYVEDHNV 246 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++ V++ G++GE+YNIGG NE +NI ++ + I + + ELI F++DRPGH Sbjct: 247 AVWQVIRYGKVGEKYNIGGENEWENIRLLEYLIQIVSEETGKPQEKLKELITFVKDRPGH 306 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRRYAID +KIK E+GW + E GL KTV WYLDN W Sbjct: 307 DRRYAIDCTKIKHELGWKQSVSFEEGLRKTVKWYLDNRKW 346 >gi|123965387|ref|YP_001010468.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9515] gi|123199753|gb|ABM71361.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9515] Length = 357 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 173/333 (51%), Positives = 239/333 (71%), Gaps = 5/333 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFS--FLQVD 58 ++IVTGGAGFIG L R ++ + K V+ +D++ YA +L+ +K S+ F FL++D Sbjct: 7 KIIVTGGAGFIGGTLIRKILQEKKDWVVYNLDQMGYASDLSWIKN-SEDYKFRHFFLKID 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++E + + +KE P+ I++ AAESHVDRSI +FI +NIIGTF LLE +R +W L Sbjct: 66 LRNKEILENLVKEINPNLIIHLAAESHVDRSIDNPLKFIESNIIGTFNLLEASRAYWKKL 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S +KK FRF+ ISTDEV+GSL G F E+ Y+P SPYSA+KASSD+L +W HTYG+ Sbjct: 126 SDNKKQLFRFIHISTDEVFGSLGLDGKFDENTKYSPRSPYSASKASSDHLAQSWYHTYGL 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P ++SNCSNN+GPY FPEKLIPL+I + I+G + LYG+G NVRDWLYVEDHV AL L+ Sbjct: 186 PTIISNCSNNFGPYQFPEKLIPLSILKGIKGEKIPLYGNGLNVRDWLYVEDHVEALLLIA 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG +G+ Y IGG ER N ++ +I +LDA+ PK + H LI+ + DRPGHD RYAI+ Sbjct: 246 EKGEVGKSYCIGGFGERTNKEVQLQICKILDAVAPKEFPHESLIKNVTDRPGHDIRYAIN 305 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+ IK ++GW P+ E GL KT+ WYL+++ W Sbjct: 306 SNLIKEKLGWTPKVTFEDGLKKTIYWYLNHSKW 338 >gi|300868058|ref|ZP_07112696.1| dTDP-glucose 4,6-dehydratase [Oscillatoria sp. PCC 6506] gi|300333978|emb|CBN57874.1| dTDP-glucose 4,6-dehydratase [Oscillatoria sp. PCC 6506] Length = 367 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 228/342 (66%), Gaps = 6/342 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TGGAGFIGS + + +V+V+D LTYAGN +L + F + DI Sbjct: 15 RILITGGAGFIGSNFVHHWCSSYPDDRVVVLDALTYAGNRQTLASLEGGENFRLVVGDIG 74 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS- 119 DR + + L+ D + +FAAESHVDRSILG F+ TN++GTF LLE R W LS Sbjct: 75 DRALVDTLLQTENIDTVAHFAAESHVDRSILGPAAFVHTNVVGTFTLLEAFRHHWQSLSI 134 Query: 120 QDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K Q FL +STDEVYGSL+ F+E PY+P+SPYSA+KA SD+L A+ HTYG+ Sbjct: 135 APHKPQGVFLHVSTDEVYGSLNPEDPPFTETTPYSPNSPYSASKAGSDHLARAYFHTYGV 194 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++NCSNNYGPYHFPEKLIPL M+ G + +YGDGQNVRDWLYV DH RAL + Sbjct: 195 PTIITNCSNNYGPYHFPEKLIPLMCINMLLGKPLPVYGDGQNVRDWLYVIDHCRALDCAI 254 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 +G+ GE YNIGGNNE KN+D+V + L+D L + +LI F++DRPGHDRRYA Sbjct: 255 HRGKPGETYNIGGNNEVKNLDLVRMLCQLMDELASDLPARPCEQLITFVKDRPGHDRRYA 314 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ID++KIK E+GW P ++ GL TV WYL + WW PL E Sbjct: 315 IDATKIKEELGWSPSVTVKEGLRLTVEWYLAHRDWWEPLLSE 356 >gi|15679777|ref|NP_276895.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622920|gb|AAB86255.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] Length = 336 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 173/331 (52%), Positives = 232/331 (70%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS RY++ + ++ +D LTY GNL +L+ + ++F++ I D Sbjct: 3 KILVTGGAGFIGSNFIRYMLQEHPYHIINLDALTYCGNLENLRGVEDEPRYTFVRGSITD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + +K+ DA++NFAAESHVDRSI + FI TNI+GT LLE +R Sbjct: 63 RKLVDGIIKDV--DAVINFAAESHVDRSIEDPEIFIRTNILGTQTLLEASR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+QISTDEVYGS +KG F+E+ P P+SPYSA+KAS+D +V A+ TYG+PV + Sbjct: 112 KHGVERFIQISTDEVYGSAEKGYFTEETPLAPNSPYSASKASADLMVRAYHRTYGLPVNI 171 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL IT +E + +YGDG NVRDW++V DH RA+ LVL +GR Sbjct: 172 TRCSNNYGPYQFPEKLIPLMITNALENKPLPVYGDGMNVRDWIHVLDHCRAVDLVLHRGR 231 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSK 300 +GE YNIGGN+ER+NI+IV LI + E LIRF+EDRPGHDRRYAID+SK Sbjct: 232 VGEVYNIGGNSERRNIEIV--------ELIVRELGKDESLIRFVEDRPGHDRRYAIDASK 283 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 I++E+GW P + E G+ +T+ WY+DN WW Sbjct: 284 IRNELGWKPLYSFEEGIRETIRWYIDNRDWW 314 >gi|78213551|ref|YP_382330.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CC9605] gi|78198010|gb|ABB35775.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CC9605] Length = 378 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 167/336 (49%), Positives = 228/336 (67%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGGAGFIG A+ R L+ + + V +DK+ YA +L+S++++ + ++ Sbjct: 17 RVLVTGGAGFIGGAVVRRLLRETTVTVFNLDKMGYASDLSSIEKVLSELGEAANDRHRLQ 76 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 QVD+ D + +A++E PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R + Sbjct: 77 QVDLTDATAVEAAVQEADPDLVMHLAAESHVDRSISGPGVFIESNVNGTYNLLQAVRSHY 136 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 LS +++D FR ISTDEV+GSL +G FSE PY+P SPYSA+KA+SD+LV AW HT Sbjct: 137 EGLSGERRDSFRMHHISTDEVFGSLGAEGRFSETTPYDPRSPYSASKAASDHLVQAWHHT 196 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+PV+L+NCSNNYGP+ FPEKLIP+ + + LYGDG NVRDWLYVEDHV AL Sbjct: 197 FGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAGCESIPLYGDGLNVRDWLYVEDHVDALL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L KG G Y +GG+ ER N ++V I +D P S H +LI + DRPGHDRRY Sbjct: 257 LAACKGESGHSYCVGGHGERTNKEVVNAICQQMDQSRPTSAPHADLITPVTDRPGHDRRY 316 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID S+I +E+GW P+ ++E GL +TV WYL N W Sbjct: 317 AIDPSRISAELGWSPRHDVEQGLAETVNWYLANQDW 352 >gi|114563925|ref|YP_751439.1| dTDP-glucose 4,6-dehydratase [Shewanella frigidimarina NCIMB 400] gi|114335218|gb|ABI72600.1| dTDP-glucose 4,6-dehydratase [Shewanella frigidimarina NCIMB 400] Length = 343 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 179/331 (54%), Positives = 230/331 (69%), Gaps = 6/331 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +++TGG GFIGSAL R+++ V+ IDKLTYA N SLK I++S + F++ DIC Sbjct: 9 LTILITGGCGFIGSALIRFILGFTNHSVINIDKLTYAANPQSLKMINKSERYHFIEGDIC 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + FQPDA+++ AAE+HVDRSI G EFI TNI+GT+ LLE +R +++ LS Sbjct: 69 NGTLLTEVFNRFQPDAVMHLAAETHVDRSISGPAEFIQTNIVGTYQLLEASRQFYNGLSS 128 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DK QFRF ISTDEV+G L D G F+E Y+PSSPYSA+KASSD+LV AW TYG+P Sbjct: 129 DKARQFRFHHISTDEVFGDLPDTGYFNEQSAYSPSSPYSASKASSDHLVKAWHRTYGLPT 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+S CSNNYGPY PEKLIPL ITR + G + +YG+GQ VRDWLYV+DHV AL +L Sbjct: 189 LISYCSNNYGPYQHPEKLIPLTITRALAGKIIPIYGNGQQVRDWLYVDDHVEALITILTL 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 G +GE Y +GGNNE+ NI +V I L L+P S + LI+ I DRPGHDRRY Sbjct: 249 GNVGETYTVGGNNEQTNIQVVASICQQLTQLVPNHQLASSNGFSSLIQHITDRPGHDRRY 308 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+SK+ + + W P+ N GL +TV WYL Sbjct: 309 AIDASKLTTTLHWTPKHNFSDGLRQTVQWYL 339 >gi|325981477|ref|YP_004293879.1| dTDP-glucose 4,6-dehydratase [Nitrosomonas sp. AL212] gi|325530996|gb|ADZ25717.1| dTDP-glucose 4,6-dehydratase [Nitrosomonas sp. AL212] Length = 351 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 173/330 (52%), Positives = 227/330 (68%), Gaps = 3/330 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGS + +V+ +DKLTYAGNL +L +++ F+Q DI D Sbjct: 2 IFVTGGAGFIGSNFVLDWLTQSDEKVVNLDKLTYAGNLKNLLSVAKDPRHIFIQGDIADT 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I L ++QP AI+N AAESHVDRSI G ++FI TNI+GTF LLE R +W+ LS Sbjct: 62 QLIDRILTQYQPRAIINLAAESHVDRSIHGPEDFIQTNILGTFRLLESVRTYWNNLSIAT 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFL +STDEVYGSL ++ F+E Y P+SPYSA+KASSD+LV A+ HTYG+PVL Sbjct: 122 KQNFRFLHVSTDEVYGSLASNEPAFTESHRYQPNSPYSASKASSDHLVRAFYHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP+ FPEKLIPL I + + +YGDG +RDWL+V DH A+ +L+ G Sbjct: 182 TTNCSNNYGPFQFPEKLIPLVIVNALAQKPLPIYGDGLQIRDWLFVLDHCSAIRRILEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG NE+ NI+IV I +L+ + P H LI +++DRPGHDRRYAI++ K Sbjct: 242 TPGETYNIGGWNEKPNIEIVKTICTILEEIYPDVVFHN-LITYVKDRPGHDRRYAINAIK 300 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I+ E+ W P E E+G+ KT+ WYL+N W Sbjct: 301 IEKELSWKPAETFETGIRKTIHWYLNNQEW 330 >gi|296114230|ref|ZP_06832885.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC 23769] gi|295979306|gb|EFG86029.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC 23769] Length = 356 Score = 344 bits (883), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 158/340 (46%), Positives = 228/340 (67%), Gaps = 3/340 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGG GFIGSA+ R+++ +++ +D +TYA + +L++ + + + + DI Sbjct: 1 MRILLTGGCGFIGSAVVRHVIRHTTHEIINVDCMTYAASSEALEDSATNRRYRSERHDIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +QPDA+++ AAESHVDRSI G D F+ TN++GT +LL+ R +W L + Sbjct: 61 DPAAMARLFAHYQPDAVMHLAAESHVDRSIDGPDTFVRTNVMGTSVLLDAARHYWQALDR 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +FRF ISTDEV+G+L F+E PY+P SPYSA+KA+SD++V AW HTYG+P Sbjct: 121 AAQARFRFHHISTDEVFGALGAQDAPFTETTPYDPRSPYSASKAASDHMVRAWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL I +EG + +YG GQN+RDWL+VEDH AL L ++ Sbjct: 181 TFVTNTTNNYGIWHFPEKLIPLMIINAVEGKPLPVYGAGQNIRDWLFVEDHAEALVLAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAID 297 +GR GE Y IG ER N+++V + +LD L P + H LI ++DRPGHD RYAID Sbjct: 241 QGRPGETYAIGARQERTNMEVVQALCAILDELHPDPTGPHARLIHHVQDRPGHDFRYAID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 S ++ +GW + + E GL KT+ WYLDN WWR L + Sbjct: 301 PSHAENMLGWRARHSFEQGLRKTIQWYLDNAAWWRGLRAQ 340 >gi|220903817|ref|YP_002479129.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868116|gb|ACL48451.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 363 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 173/353 (49%), Positives = 239/353 (67%), Gaps = 13/353 (3%) Query: 4 IVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGSA Y++ + I+V+ +DKLTYAGN +L ++ F++ DI + Sbjct: 5 LVTGGAGFIGSA---YVLQARRAGIRVINLDKLTYAGNPANLASLTGDPEHVFVRGDIGN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + L+ QPDA+VNFAAESHVDRSI+ D F TN++GT LL + WWS LS Sbjct: 62 EELVAFLLETHQPDAVVNFAAESHVDRSIVAPDAFARTNVLGTATLLRVVKDWWSGLSFK 121 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRFL +STDEVYG+L G FSE PY+P+SPYSA+KA+SD++V A+ TYG+P+ Sbjct: 122 QAADFRFLHVSTDEVYGALQPGDPAFSESTPYSPNSPYSASKAASDHMVRAFHETYGLPI 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 LL+NCSNNYGP FPEKLIPL I +E + +YG G N+RDWL+V+DH A+ VL+ Sbjct: 182 LLTNCSNNYGPRQFPEKLIPLMILTALERKPLPVYGQGANIRDWLHVDDHCTAIARVLEA 241 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDS 298 G++G YN+GG+ ER N+++V + +LD + P + + +LI F+ DRPGHD RYAID Sbjct: 242 GQVGRTYNVGGHAERTNLEVVHAVCAILDDVRPSARGPYADLITFVSDRPGHDFRYAIDC 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 S+I+SE+GW P ++GL TV WYL+N+ W +L Y +W ++N Sbjct: 302 SRIESELGWRPSRRFDTGLRDTVRWYLENSAW-----VDLVRSGAYLEWMDIN 349 >gi|294056082|ref|YP_003549740.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293615415|gb|ADE55570.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 354 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 167/344 (48%), Positives = 227/344 (65%), Gaps = 8/344 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+IVTGGAGFIGSAL R+L+ VL +D LTYA N SL +SQS+ + F Q+D+ Sbjct: 1 MRIIVTGGAGFIGSALIRHLIQKSHHHVLNLDALTYASNTRSLAAVSQSDRYQFAQIDLG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + +++QPD +++ AAESHVDRSI D+FI TN+ GT LL + +WS LS Sbjct: 61 DRAALANCFQQYQPDTVIHLAAESHVDRSIDSPDQFIATNVSGTLNLLRVAQDYWSTLSA 120 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +DQFR +STDEVYG L+ + FSE PY PSSPYSA+KA++D+L+ AW TYG+ Sbjct: 121 AAQDQFRINHVSTDEVYGDLNDSPEAAFSESSPYRPSSPYSASKAAADHLIHAWTRTYGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P ++ C NNYGPY FPEKLIP I R + G + +YGDG R+WL+V D AL VL Sbjct: 181 PSSIAVCCNNYGPYQFPEKLIPHMILRALNGQSLTIYGDGHQSREWLHVNDCAAALTAVL 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLD----ALIPKSYSHTELIRFIEDRPGHDRR 293 + G+ +RYNIG + N+++V + L A + S H+ LI F+ DRPGHDR Sbjct: 241 ESGKANQRYNIGSGQQIHNLELVRRLCDHLSKSPHARLVGSNLHS-LIEFVSDRPGHDRA 299 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 YA+DS KI++E+ W P+ + + GLN T+ WYL N WW+P+ + Sbjct: 300 YALDSRKIQAELNWKPEVSFDQGLNLTIEWYLANPDWWKPILEH 343 >gi|213028895|ref|ZP_03343342.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 274 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 160/271 (59%), Positives = 203/271 (74%), Gaps = 2/271 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLEQVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 AKAAFRFHHISTDEVYGDLHTADDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPYHFPEKLIPL I + G + +YG+GQ +RDWLYVEDH RALY V+ Sbjct: 183 LVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYHVVTN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 G +GE YNIGG+NERKN+D+V I LL+ L Sbjct: 243 GAVGETYNIGGHNERKNLDVVRTICALLEEL 273 >gi|116804301|gb|ABK27313.1| RfbB [Escherichia coli] Length = 294 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 162/274 (59%), Positives = 199/274 (72%), Gaps = 10/274 (3%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L DKK+ FRF Sbjct: 5 FAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDGDKKNSFRF 64 Query: 129 LQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 65 HHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLP 124 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY V+ Sbjct: 125 TIVTNCSNNYGPYHFPEKLIPLVILNALEGKGLPIYGKGDQIRDWLYVEDHARALYTVVT 184 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGHDRRYAID+ Sbjct: 185 EGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDA 244 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI E+GW PQE ESG+ KT+ WYL+NN W R Sbjct: 245 EKIGRELGWKPQETFESGIRKTINWYLNNNDWCR 278 >gi|33862388|ref|NP_893948.1| dTDP-glucose-4,6-dehydratase [Prochlorococcus marinus str. MIT 9313] gi|33640501|emb|CAE20290.1| dTDP-glucose-4,6-dehydratase [Prochlorococcus marinus str. MIT 9313] Length = 370 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/336 (51%), Positives = 226/336 (67%), Gaps = 10/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIG A+ R L+ + V +DKL YA +L S++ Q++ + L VD+ D Sbjct: 12 RVLITGGAGFIGGAVVRRLLEGSQANVFNLDKLGYASDLTSIR---QNDRYKHLHVDLAD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +A+ PD +++ AAESHVDRSI G FI +N+ GTF LL+ W L ++ Sbjct: 69 SAATSAAVVTADPDLVMHLAAESHVDRSIDGPKAFIESNVNGTFNLLQAVLSHWEKLPEE 128 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEV+GSL G FSE PY+P SPYSA+KA+SD+LV AW HTYG+PV+ Sbjct: 129 RHQHFRFHHISTDEVFGSLGPIGRFSEITPYDPRSPYSASKAASDHLVSAWHHTYGLPVV 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGP+ FPEKLIP+AI + + G + LYGDG N+RDWLYVEDHV AL L +G Sbjct: 189 LTNCSNNYGPWQFPEKLIPIAILKAVAGEPIPLYGDGTNIRDWLYVEDHVEALLLAATRG 248 Query: 241 RIGERYNIGGN------NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +GE Y +GG +ER N D++ I L+D+L P HT LI + DRPGHDRRY Sbjct: 249 GLGESYCVGGAGDHGSPSERTNRDVLETICNLMDSLRPYGAPHTRLITRVSDRPGHDRRY 308 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+ KI +++GW P+ + E GL TV WYLDN W Sbjct: 309 AIDAKKITNDLGWKPRHSFEEGLEATVAWYLDNLDW 344 >gi|28198136|ref|NP_778450.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Temecula1] gi|182680766|ref|YP_001828926.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa M23] gi|28056196|gb|AAO28099.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Temecula1] gi|182630876|gb|ACB91652.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa M23] gi|307579232|gb|ADN63201.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 353 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 173/336 (51%), Positives = 226/336 (67%), Gaps = 4/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG ++ L +V+ +D LTYAG+L +L + F+ DI DR Sbjct: 7 LVTGGAGFIGGNFVLQAIS-LGHRVINLDALTYAGHLETLAALDGCAEHLFVHGDIGDRA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +PDA++NFAAESHVDRSI FI TN++GT +LLE +W L + + Sbjct: 66 LVSRLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGTLLLLEAVCGYWKALPEAAR 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 126 AAFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +CSNNYGPYHFPEKLIPL IT+ + G + +YGDG++VRDWL+V DH AL VL GR+ Sbjct: 186 HCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVLAGGRV 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG ER+N+++V I LLD P++ S+ I + DRPGHDRRYAID+SK Sbjct: 246 GETYNIGGQAERENLEVVRMICRLLDERRPRADGLSYQSQIVHVADRPGHDRRYAIDTSK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + SE+GW P E GL TV WYL + W R + + Sbjct: 306 LVSELGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQ 341 >gi|332535412|ref|ZP_08411202.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas haloplanktis ANT/505] gi|332035177|gb|EGI71688.1| dTDP-glucose 4,6-dehydratase [Pseudoalteromonas haloplanktis ANT/505] Length = 362 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 176/353 (49%), Positives = 231/353 (65%), Gaps = 21/353 (5%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG+ Y L + + +V+V+D LTYAGN +L ++ + +F+ DICD Sbjct: 6 LLVTGGAGFIGANFVHYWLAQNPQDKVIVLDALTYAGNKANLDSVANNPNMTFVHGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 I + + Q + IV+FAAESHVDRSI G D F+ TNI+GT+ LL+ + W Sbjct: 66 TALIENLIDTHQLNTIVHFAAESHVDRSITGPDAFVETNILGTYSLLKAAKKKWIDEPKA 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + RF +STDEVYG+L F+E+ Y P+SPYSA+KA+SD+LV A+ HTYG Sbjct: 126 AGKEPLEHRFHHVSTDEVYGTLSATDPAFTEETAYAPNSPYSASKAASDHLVRAYHHTYG 185 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V SNCSNNYGP+HFPEKLIPL +T ++ + +YGDGQ +RDWLYVEDH R + LV Sbjct: 186 LEVTTSNCSNNYGPFHFPEKLIPLIVTNILNDKPLPVYGDGQQIRDWLYVEDHARGIELV 245 Query: 237 LKKGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPKSYSHTE-----LI 281 LKKGRIGE YNIGGNNE NIDIV F L P + + E LI Sbjct: 246 LKKGRIGENYNIGGNNEWANIDIVKLVCKVMGEKFAKNPELAKRFPNAKAAMENNVEQLI 305 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ DR GHDRRYAID++K +E+G+ P E+ E+G KT+ WYLDN WW PL Sbjct: 306 TYVTDRAGHDRRYAIDATKTNNELGYVPAESFETGFAKTLDWYLDNEAWWLPL 358 >gi|87123107|ref|ZP_01078958.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RS9917] gi|86168827|gb|EAQ70083.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RS9917] Length = 370 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 170/339 (50%), Positives = 228/339 (67%), Gaps = 12/339 (3%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI--------SQSN--- 50 R++VTGGAGFIG A+ R L+N+ V +DK+ YA + S++E+ S S Sbjct: 23 RILVTGGAGFIGGAVVRRLLNESDALVFNLDKMGYASDCTSIEEVLAQLGERASTSEGEC 82 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L+VD+ D + A++ PD +++ AAESHVDRSI G + FI++N+ GT LL+ Sbjct: 83 RHQLLRVDLADAQATAEAVRLADPDLVLHLAAESHVDRSIAGPEAFISSNVTGTLHLLQA 142 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVL 169 R W L+ +++ FR ISTDEV+GSL +G FSE PY+P SPYSA+KA+SD+LV Sbjct: 143 VRAHWEQLAGERQANFRMHHISTDEVFGSLGPEGRFSETTPYDPRSPYSASKAASDHLVN 202 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW HTYG+PV+L+NCSNNYGP+ FPEKLIP+ I + G+ + LYGDG NVRDWL+VEDH Sbjct: 203 AWHHTYGLPVVLTNCSNNYGPWQFPEKLIPVVILKAAAGAAIPLYGDGLNVRDWLHVEDH 262 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V AL L +G +G Y +GG ER N IV I +LD PK H++LIR + DRPG Sbjct: 263 VDALLLAACRGELGSSYCVGGFGERTNRQIVELICNVLDQAQPKGSPHSQLIRSVSDRPG 322 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 HDRRYAID S+I+SE+GW P+ ++E GL TV W+L + Sbjct: 323 HDRRYAIDPSRIQSELGWQPRHSLEVGLADTVDWFLTHQ 361 >gi|71898668|ref|ZP_00680838.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] gi|71731615|gb|EAO33676.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] Length = 353 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 172/336 (51%), Positives = 226/336 (67%), Gaps = 4/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG ++ L +V+ +D LTYAG+L +L + F+ DI DR Sbjct: 7 LVTGGAGFIGGNFVLQAIS-LGHRVINLDALTYAGHLETLAALDGCAEHLFVHGDIGDRA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +PDA++NFAAESHVDRSI FI TN++GT +LLE +W L + + Sbjct: 66 LVSRLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGTLLLLEAVCGYWKALPEAAR 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 126 AAFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +CSNNYGPYHFPEKLIPL IT+ + G + +YGDG++VRDWL+V DH AL VL GR+ Sbjct: 186 HCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVLAGGRV 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG ER+N+++V I LLD P++ S+ I + DRPGHDRRYAID+SK Sbjct: 246 GETYNIGGQAERENLEVVRMICCLLDERRPRADGQSYQSQIVHVADRPGHDRRYAIDTSK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + S++GW P E GL TV WYL + W R + + Sbjct: 306 LVSQLGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQ 341 >gi|124025564|ref|YP_001014680.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. NATL1A] gi|123960632|gb|ABM75415.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. NATL1A] Length = 358 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 235/338 (69%), Gaps = 5/338 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 R++VTGGAGFIG A+ R L+ + ++ IDK+ YA +L ++ EI + S+ + F ++ Sbjct: 16 RILVTGGAGFIGGAVIRKLLKESTSKIFNIDKIGYASDLTAIDEILRTKDYSDRYDFAKI 75 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ + A+ + PD I++ AAESHVDRSI G + FI +NI GTF LLE TR + Sbjct: 76 DLSIPDETAKAISDSDPDLIMHLAAESHVDRSIQGPEAFINSNIFGTFNLLEATRKHYEN 135 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 LS +K+ FRFL ISTDEV+GSL G F+E Y+P SPYSA+KASSD+LV +W HT+ Sbjct: 136 LSNKRKNDFRFLHISTDEVFGSLGLNGKFTESTSYDPRSPYSASKASSDHLVRSWHHTFQ 195 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P++++NCSNN+GP+ FPEKLIP+AI + + + LYGDG+N+RDWLYV+DHV AL+L Sbjct: 196 LPIVITNCSNNFGPWQFPEKLIPVAINKALALKSIPLYGDGENIRDWLYVDDHVDALFLA 255 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG+IG+ Y +GG ERKNI+I+ I +LD + PK LI ++DR GHDRRYAI Sbjct: 256 ANKGKIGDSYCVGGYGERKNIEILKIICKILDEIYPKHSPFERLITKVQDRKGHDRRYAI 315 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D SKI++E+GW P+ ++E L TV WY+ N W + L Sbjct: 316 DPSKIRNELGWEPKYSLEDRLETTVQWYIKNKNWSQRL 353 >gi|218681556|ref|ZP_03529419.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CIAT 894] Length = 351 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 173/337 (51%), Positives = 231/337 (68%), Gaps = 10/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++++ L +Q V+ +D LTYAGNL +L + F++ I Sbjct: 2 ILVTGGAGFIGA---NFVLDWLALQDEPVVNLDVLTYAGNLENLASVWSHPRHLFVKGSI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + L+ +P AI+NFAAESHVDRSI G +EFI TNI+GTF LLE TR + + Sbjct: 59 ADYDLVEELLRAHRPRAILNFAAESHVDRSIHGPEEFIQTNIVGTFRLLEATRGFLAAQD 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + FRFL +STDEVYGSL + FSE+ Y P+SPYSA+KA+SD+LV A+ HTYG+ Sbjct: 119 EAFRLSFRFLHVSTDEVYGSLAPTEAAFSEERKYEPNSPYSASKAASDHLVRAYHHTYGL 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL +NCSNNYGPYHFPEKLIPL I + G + +YGDG VRDWL+V+DH A+ VL Sbjct: 179 PVLTTNCSNNYGPYHFPEKLIPLVIHNALSGKQIPIYGDGMQVRDWLFVKDHCSAIRRVL 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYA 295 + G++GE YN+GG NE N+ +V + +LD L +P S+ I F+ DRPGHDRRYA Sbjct: 239 ENGQVGETYNVGGRNELTNLSVVNTLCEILDELRPLPDRASYKSQIAFVRDRPGHDRRYA 298 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID++KI+ E+ W P E +G+ KTV WYL N W R Sbjct: 299 IDAAKIERELNWRPGETFNTGIRKTVEWYLANEAWVR 335 >gi|93115469|gb|ABE98429.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 297 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 161/272 (59%), Positives = 196/272 (72%), Gaps = 10/272 (3%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L DKK+ FRF Sbjct: 5 FAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRF 64 Query: 129 LQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 65 HHISTDEVYGDLPYPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLP 124 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY V+ Sbjct: 125 TIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVT 184 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNIGG+NE+KNID+V I LLD ++PK S+ E I ++ DRPGHDRRYAID+ Sbjct: 185 EGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVTDRPGHDRRYAIDA 244 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW PQE ESG+ KTV WYL N W Sbjct: 245 EKIGRELGWKPQETFESGIRKTVEWYLSNTKW 276 >gi|15836860|ref|NP_297548.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa 9a5c] gi|9105070|gb|AAF83068.1|AE003879_3 dTDP-glucose 4,6-dehydratase [Xylella fastidiosa 9a5c] Length = 353 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 173/336 (51%), Positives = 227/336 (67%), Gaps = 4/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG ++ L +V+ +D LTYAG+L +L + F++ DI DR Sbjct: 7 LVTGGAGFIGGNFVLQAIS-LGHRVINLDALTYAGHLETLALLDGCAEHLFVRGDIGDRA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +PDA++NFAAESHVDRSI FI TN++GT +LLE +W L + + Sbjct: 66 LVSCLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGTLLLLEAVCGYWKALPEAAR 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 126 AAFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +CSNNYGPYHFPEKLIPL IT+ + G + +YGDG++VRDWL+V DH AL VL GR+ Sbjct: 186 HCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVLAGGRV 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG ER+N+++V I LLD P++ S+ I + DRPGHDRRYAID+SK Sbjct: 246 GETYNIGGQAERENLEVVRMICRLLDERRPRADGQSYQSQIVHVADRPGHDRRYAIDTSK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + SE+GW P E GL TV WYL + W R + + Sbjct: 306 LVSELGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQ 341 >gi|116074422|ref|ZP_01471684.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. RS9916] gi|116069727|gb|EAU75479.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. RS9916] Length = 373 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 170/336 (50%), Positives = 224/336 (66%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 R++VTGGAGFIG A+ R L+ D V +DK+ YA +L S++E+ + LQ Sbjct: 17 RILVTGGAGFIGGAVVRRLLRDSDATVFNLDKMGYASDLTSIQEVLAEQGEADGVRHRLQ 76 Query: 57 -VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 VD+ D E + +A++E PD +++ AAESHVDRSI G EFI++NI GT+ LL+ R Sbjct: 77 CVDLKDAEAVDAAVREANPDLVMHLAAESHVDRSISGPGEFISSNITGTYNLLQAVRSHV 136 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 LS+ + FR ISTDEV+GSL +G FSE PY+P SPYSA+KA+SD+LV AW HT Sbjct: 137 ERLSEARAAAFRLHHISTDEVFGSLGAEGRFSETTPYDPRSPYSASKAASDHLVQAWHHT 196 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+PV+L+NCSNNYGP+ FPEKLIP+ + G + LYGDG NVRDWLYVEDHV AL Sbjct: 197 FGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAAGEPIPLYGDGLNVRDWLYVEDHVDALL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L +G+ G Y +GG+ E+ N ++V I LD P + H LI + DRPGHDRRY Sbjct: 257 LAACRGQSGRSYCVGGHGEKTNKEVVTTICNQLDQHHPNNAPHAHLITRVIDRPGHDRRY 316 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID ++I E+GW P+ N+E GL TV WYL + W Sbjct: 317 AIDPTRITEELGWQPRHNVEQGLAATVAWYLQHQDW 352 >gi|93115446|gb|ABE98408.1| dTDP-glucose 4,6-dehydratase [Escherichia coli] Length = 297 Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 161/272 (59%), Positives = 195/272 (71%), Gaps = 10/272 (3%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L DKK+ FRF Sbjct: 5 FAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRF 64 Query: 129 LQISTDEVYGSL----------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ISTDEVYG L + LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 65 HHISTDEVYGDLPHPDEVNNKEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLP 124 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLYVEDH RALY V+ Sbjct: 125 TIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVT 184 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNIGG+NE KNID+V I LLD ++PK S+ E I ++ DRPGHDRRYAID+ Sbjct: 185 EGKAGETYNIGGHNENKNIDVVLTICDLLDEIVPKEQSYREQITYVADRPGHDRRYAIDA 244 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW PQE ESG+ KTV WYL N W Sbjct: 245 EKISRELGWKPQETFESGIRKTVEWYLSNTKW 276 >gi|186684366|ref|YP_001867562.1| dTDP-glucose 4,6-dehydratase [Nostoc punctiforme PCC 73102] gi|186466818|gb|ACC82619.1| dTDP-glucose 4,6-dehydratase [Nostoc punctiforme PCC 73102] Length = 364 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 232/342 (67%), Gaps = 15/342 (4%) Query: 2 RLIVTGGAGFIGSAL----CRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 RL+VTGGAGFIG+ C+ +D +V+V+D LTYAGN +L + F F+Q Sbjct: 4 RLLVTGGAGFIGANFVHHWCQVYPDD---RVVVLDALTYAGNRLNLAVVEGRENFRFVQG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICDR + + L D I +FAAESHVDRSILG F+ TN++GTF LLE R +W Sbjct: 61 DICDRTIVDNLLSTENIDTIAHFAAESHVDRSILGPAAFVQTNVVGTFTLLEAFRQYWEA 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +Q +RFL +STDEVYGSL D FSE PY P+SPYSA+KA SD+LV A+ HTY Sbjct: 121 KAQ--PSDYRFLHVSTDEVYGSLGPDDAAFSETTPYAPNSPYSASKAGSDHLVRAYYHTY 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P +++NCSNNYGPY FPEKLIPL + G + +YGDG+NVRDWLYV DH RAL + Sbjct: 179 KLPTIITNCSNNYGPYQFPEKLIPLMCINTLIGKPLPVYGDGKNVRDWLYVVDHCRALDV 238 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL---IPKSYSHTELIRFIEDRPGHDR 292 V+ G+ GE YNIGGNNE +N+++V + ++D L +P + ELI F++DR GHDR Sbjct: 239 VINHGQPGETYNIGGNNEVENLNLVQLLCQMMDELASDLPVRPA-KELITFVKDRQGHDR 297 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RYAI+++KIK+++GW P + GL TV WYL++ WW PL Sbjct: 298 RYAINANKIKTQLGWTPSVTIAEGLRLTVEWYLNHRDWWEPL 339 >gi|40388616|gb|AAR85521.1| RmlB [Thermoanaerobacterium thermosaccharolyticum] Length = 351 Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 172/332 (51%), Positives = 229/332 (68%), Gaps = 6/332 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS +++ I+++ +DKLTYAGNL +LK + ++F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFIHFMLKKYDDIKIINLDKLTYAGNLENLKAVENKPNYTFVQADICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I + K + D +VNFAAESHVDRSI+ + F TNI+GT LL R W K Sbjct: 65 EFINNLFKHYDIDYVVNFAAESHVDRSIIEPEIFAKTNILGTVTLLNAARNAWQDGDGFK 124 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +D+ +FLQ+STDEVYGSL K G F+E P +P SPYS++KA++D +V A+ TY +PV + Sbjct: 125 EDK-KFLQVSTDEVYGSLGKEGYFTEKTPLDPHSPYSSSKAAADLIVKAYYDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ +VL KG+ Sbjct: 184 TRCSNNYGPYQFPEKLIPLMINNCLNKKPLPVYGDGMNIRDWLYVEDHCKAIDMVLHKGK 243 Query: 242 IGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YNIGG+NER NI IV I ++ D + S LIRF+EDR GHDRRY ID +K Sbjct: 244 MGEIYNIGGHNERTNIHIVKTIISYIHDNV--DSTVDESLIRFVEDRKGHDRRYGIDPTK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 IK E+GW+P+ E G+ KT+ WYL+N W + Sbjct: 302 IKEELGWYPETKFEDGIIKTIKWYLENKEWMK 333 >gi|88705328|ref|ZP_01103039.1| dTDP-D-glucose 4, 6-dehydratase [Congregibacter litoralis KT71] gi|88700418|gb|EAQ97526.1| dTDP-D-glucose 4, 6-dehydratase [Congregibacter litoralis KT71] Length = 354 Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 180/352 (51%), Positives = 229/352 (65%), Gaps = 21/352 (5%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y L + +V+ D LTYAGN +L + + FSF+Q DICD Sbjct: 5 LLVTGGAGFIGSNFVHYWLGTHPEDRVIAYDALTYAGNRENLASVEDNANFSFVQADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ D +V+FAAESHVDRSI G D FI TN+IGT LL+ R W L D Sbjct: 65 EAGVTQLMRDESVDTVVHFAAESHVDRSISGPDAFIETNVIGTHSLLKAARSVW--LDGD 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYGSL D F E Y P+SPYSA+KA+SD+LV A+ HTYG+ V Sbjct: 123 GKPH-RFHHVSTDEVYGSLAPDAPGFFEAQQYQPNSPYSASKAASDHLVRAYHHTYGLQV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SNCSNNYGP+HFPEKLIPL +T ++ G + +YGDG N+RDWLYVEDH R + LVL K Sbjct: 182 STSNCSNNYGPFHFPEKLIPLCLTNILRGRELPVYGDGSNIRDWLYVEDHCRGIELVLNK 241 Query: 240 GRIGERYNIGGNNERKNIDIV------FEIGFLLDALIPKSY---------SHTELIRFI 284 G +GE YNIGGNNE N+ IV + F D + +SY S L+RF+ Sbjct: 242 GEVGECYNIGGNNEWNNLAIVKLLCERLDARFAADPELRESYPDAPQSQGESADSLVRFV 301 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 DR GHD RYAID+S+I +E+G+ P E E+G+ +T+ WYL + WWRPL + Sbjct: 302 TDRAGHDWRYAIDASRIMNELGYAPAETFETGIERTIDWYLAHEAWWRPLVQ 353 >gi|113868864|ref|YP_727353.1| dTDP-D-glucose 4,6-dehydratase [Ralstonia eutropha H16] gi|113527640|emb|CAJ93985.1| dTDP-D-glucose 4,6-dehydratase [Ralstonia eutropha H16] Length = 354 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 225/332 (67%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ + +L + ++ +DKLTYAGN SL + FLQ DICD Sbjct: 4 ILVTGGAGFIGANFVIDWLRQEGAAGIVNVDKLTYAGNRKSLAALEGDVRHVFLQADICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+ ++P A+++FAAESHVDRSI+ +F+ TN++GTF LLE +W L Sbjct: 64 TAAVTALLEAYRPRAVLHFAAESHVDRSIVSPGDFVQTNVVGTFRLLETVLEYWQALDAP 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + FRFL +STDEV+GSL F+E Y P+SPYSA+KA+SD++V A+ HTYG+PV Sbjct: 124 ARAAFRFLHVSTDEVFGSLAPADPPFTEVSRYLPNSPYSASKAASDHMVRAYHHTYGLPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L +NCSNNYGP FPEKLIPL IT + G + +YGDG +VRDWLYV DH AL VL Sbjct: 184 LTTNCSNNYGPLQFPEKLIPLMITNAMVGKPLPVYGDGLHVRDWLYVGDHCAALREVLAS 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 G+ G YNIGG NE+ N+++V + LLD + PK+ S+ I F++DRPGHDRRYA+D+ Sbjct: 244 GQPGATYNIGGLNEKTNLEVVQALCDLLDEVSPKTAGSYRNQITFVKDRPGHDRRYAVDA 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ E+GW P E ESGL KTV WY+ N W Sbjct: 304 GKLARELGWKPSETFESGLRKTVQWYMQNAEW 335 >gi|127514632|ref|YP_001095829.1| dTDP-glucose 4,6-dehydratase [Shewanella loihica PV-4] gi|126639927|gb|ABO25570.1| dTDP-glucose 4,6-dehydratase [Shewanella loihica PV-4] Length = 356 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 169/335 (50%), Positives = 232/335 (69%), Gaps = 7/335 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGSAL R+L+ +V+ DKLTYAGNL SL+ I+Q+ + F+Q DI D Sbjct: 14 ILITGGAGFIGSALIRHLIALGGCRVVNYDKLTYAGNLASLESIAQAPNYHFIQADINDG 73 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + AL+++Q D +++ AAE+HVDRSI G FI TNI+GTF LL++ ++ L + Sbjct: 74 DTLGGALRQYQIDLVIHLAAETHVDRSIEGPRAFIGTNIVGTFELLQQCLDYYRKLPIEI 133 Query: 123 KDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +FR +STDEV+G L + G FSE PY PSSPYSA+KA++D+LV AW TYG+PV Sbjct: 134 AARFRLHHVSTDEVFGDLGSDEAGYFSEQSPYAPSSPYSASKAAADHLVRAWHRTYGLPV 193 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +LSNCSNNYGPY +PEKLIP+ + ++G + +YGDG+ +RDWLYV+DH AL V + Sbjct: 194 VLSNCSNNYGPYQYPEKLIPVTLLNALQGKLIPVYGDGKQIRDWLYVDDHAHALCQVAAR 253 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G +GE YNIGG NE N+++V I LL+ + + +LI F++DRPGHD RYA Sbjct: 254 GELGESYNIGGMNEMTNLEVVSLICDLLNQKVTEKPCGISDFRQLIGFVKDRPGHDTRYA 313 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SK+ +GW P E+ SGL KTV WYL + W Sbjct: 314 IDASKLSRTLGWQPSESFASGLEKTVDWYLTHLDW 348 >gi|260438968|ref|ZP_05792784.1| dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM 2876] gi|292808619|gb|EFF67824.1| dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM 2876] Length = 359 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/339 (49%), Positives = 228/339 (67%), Gaps = 10/339 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +LK+I + ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFRKYDNEIRIINVDVLTYAGNLENLKDIENRDNYTFIKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE I E D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 65 REAIEKIFAENDIDRVVHFAAESHVDRSIRNPEVFVQTNVMGTAVMLNAAKKAWELPDGT 124 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +FL +STDEVYGSL D F E P +P SPYSA+KASSD LV A+ TY P Sbjct: 125 FKADKKFLHVSTDEVYGSLPDDDNAFFYETSPIDPHSPYSASKASSDMLVKAYIDTYHFP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++NCSNNYGPY FPEKLIPL I + G + +YGDG NVRDWLYV+DH +A+ +V + Sbjct: 185 ANITNCSNNYGPYQFPEKLIPLIINNALHGKKLPVYGDGLNVRDWLYVDDHAKAIDMVQE 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRR 293 KGR+GERYNIGG+NE++NIDI+ I L ++P K++ + +LI ++EDR GHDRR Sbjct: 245 KGRLGERYNIGGHNEKRNIDIIKIILETLREMLPDDDERKAHINEDLITYVEDRKGHDRR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAI KIKSEIGW+P+ + G+ T+ W+ ++ W + Sbjct: 305 YAIAPDKIKSEIGWYPETMFKDGIRLTIAWFFEHEDWMK 343 >gi|16357461|gb|AAL18013.1| dTDP-glucose 4,6-dehydratase [Aneurinibacillus thermoaerophilus] Length = 341 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 176/334 (52%), Positives = 232/334 (69%), Gaps = 21/334 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y+V+ V +D LTYAGNL +LK + + ++F++ DI Sbjct: 1 MKVLVTGGAGFIGSNFVNYMVHKYPNYTFVNVDALTYAGNLENLKPVENAPNYTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + + + D IVNFAAESHVDRSI D F+ TNI+GT ILL+ R Sbjct: 61 TDREKMEKLVAD-GVDVIVNFAAESHVDRSITEPDTFVKTNIMGTQILLDIAR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +++QISTDEVYG+L + G F+E+ P P+SPYSA+KAS+D LV A+ TYG+P Sbjct: 113 --KCNINKYVQISTDEVYGTLGETGYFTEETPLAPNSPYSASKASADLLVRAYHETYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL I + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYHFPEKLIPLMIINALHDKELPVYGDGLNIRDWLYVEDHCAAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG+ GE YN+GGNNER NI+IV I K +E LIRF++DRPGHDRRYAID Sbjct: 231 KGKDGEVYNVGGNNERTNIEIV--------KRILKELGKSENLIRFVKDRPGHDRRYAID 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++K+K+E+GW P+ + E+G+ KT+ WYLDN WW Sbjct: 283 ATKLKTELGWQPKYDFETGIVKTIQWYLDNRDWW 316 >gi|237711071|ref|ZP_04541552.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|229454915|gb|EEO60636.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] Length = 357 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 173/333 (51%), Positives = 228/333 (68%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I + ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVNQYPEYHIINLDKLTYAGNLANLKDIENAANYTFIKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I K++Q D +++ AAESHVDRSI F TNI+GT LL+ +L W L + Sbjct: 67 FNKIMDIFKQYQIDGVIHLAAESHVDRSIKDPFTFAQTNIMGTLSLLQAAKLTWESLPE- 125 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + RF ISTDEVYG+L D LF+E+ Y P SPYSA+KASSD+ V A+ TYG+P Sbjct: 126 KFENKRFYHISTDEVYGALKFDGTLFTEETKYQPHSPYSASKASSDHFVRAFHDTYGMPT 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYVEDH RA+ ++ K Sbjct: 186 IVTNCSNNYGPYQFPEKLIPLFINNIRRGKELPVYGKGENVRDWLYVEDHARAIDIIFHK 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYAID 297 G+I + YNIGG NE KNID++ I +D L+ P+ YS LI ++ DR GHD RYAID Sbjct: 246 GKIADTYNIGGFNEWKNIDLIKVIIKTVDRLLGNPEGYS-LRLITYVTDRKGHDLRYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K+K E+GW P E G+ KTV WYLDN W Sbjct: 305 SNKLKKELGWEPSLQFEEGIEKTVKWYLDNQEW 337 >gi|71276347|ref|ZP_00652624.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Dixon] gi|71901361|ref|ZP_00683455.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] gi|71162809|gb|EAO12534.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Dixon] gi|71728860|gb|EAO30997.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] Length = 353 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 171/336 (50%), Positives = 225/336 (66%), Gaps = 4/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG ++ L +V+ +D LTYAG+L +L + F+ DI DR Sbjct: 7 LVTGGAGFIGGNFVLQAIS-LGHRVINLDALTYAGHLETLAALDGCAEHLFVHGDIGDRA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +PDA++NFAAESHVDRSI FI TN++G +LLE +W L + + Sbjct: 66 LVSCLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGALLLLEAVCGYWKALPEAAR 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 126 AAFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +CSNNYGPYHFPEKLIPL IT+ + G + +YGDG++VRDWL+V DH AL VL GR+ Sbjct: 186 HCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVLAGGRV 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG ER+N+++V I LLD P++ S+ I + DRPGHDRRYAID+SK Sbjct: 246 GETYNIGGQAERENLEVVRMICCLLDERRPRADGLSYQSQIVHVADRPGHDRRYAIDTSK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + S++GW P E GL TV WYL + W R + + Sbjct: 306 LVSQLGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQ 341 >gi|223937101|ref|ZP_03629008.1| dTDP-glucose 4,6-dehydratase [bacterium Ellin514] gi|223894123|gb|EEF60577.1| dTDP-glucose 4,6-dehydratase [bacterium Ellin514] Length = 337 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/333 (51%), Positives = 234/333 (70%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGGAGFIG+ L + ++++ I LV +D LTYAG+L +L+++S+ + F + D+ Sbjct: 1 MNLLITGGAGFIGANLIQLIIDNPGITRLVNLDALTYAGHLANLEQVSRHPNYVFEKADL 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +++ +++ AAESHVDRSI G +FI TNI+GTF LLE R +W Sbjct: 61 RDKSAVLEVVQKHAITHVMHLAAESHVDRSITGPGDFIQTNIVGTFNLLEACRGFWGTDL 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +DK RF ISTDEVYGSL G F E PY P+SPYSA+KASSD LV A+ HTYG+P Sbjct: 121 KDK----RFHHISTDEVYGSLGATGYFLETTPYAPNSPYSASKASSDLLVRAYHHTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP+ FPEKLIP+ I ++ + +YGDG NVRDWLYV DH +AL+ VL Sbjct: 177 TVITNCSNNYGPFQFPEKLIPVVIQSVLARQPIPVYGDGLNVRDWLYVRDHAQALWQVLT 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 +G+ GE YN+GG+NE NI IV I L+D L P+ ++ +LI +++DRPGHDRRYAID Sbjct: 237 RGKEGETYNVGGHNEWANIHIVQLICDLIDELAPQVGGNSRQLITYVKDRPGHDRRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +++IK+E+GW P E G+ +TV WYLDN W Sbjct: 297 ATRIKNELGWVPAHTFEQGIRETVQWYLDNQPW 329 >gi|332702168|ref|ZP_08422256.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] gi|332552317|gb|EGJ49361.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] Length = 358 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 174/358 (48%), Positives = 234/358 (65%), Gaps = 8/358 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L N K V+ +DKLTYAGNL SL+++ F++ DI D Sbjct: 5 ILVTGGAGFIGSCFVLGLRNLRKANVVTLDKLTYAGNLMSLRDVEDDPGHVFVRGDIGDL 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L E +P A++NFAAE+HVDRSI F+ TN+ GT +L +W LSQ + Sbjct: 65 ALLGALLAEHRPKAVINFAAETHVDRSIHDPAAFVRTNVDGTCGMLAAVLAYWRALSQSE 124 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +FRFL +STDEVYG+L G F+E Y P+SPYSA+KA+SD+ V A+ H+YG+P L Sbjct: 125 RHEFRFLHVSTDEVYGALKLGEPAFTESTSYAPNSPYSASKAASDHFVRAYHHSYGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP FPEKLIPL IT + + +YG G+N+RDWLYV DH A+ +VL++G Sbjct: 185 VTNCSNNYGPRQFPEKLIPLMITNALAEKPLPVYGQGRNIRDWLYVADHCEAIEVVLERG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDSS 299 G+ YNIGG E+ N++IV + +LD L+P S ++ LIRF+ DRPGHD RYAI+ S Sbjct: 245 IPGQTYNIGGRCEKTNVEIVHALCSVLDDLVPTSRGPYSRLIRFVSDRPGHDFRYAINIS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNR 357 KI E+GW P+E ESG+ KTV WYL N W + + +Y W N S R Sbjct: 305 KISIELGWQPRETFESGIRKTVEWYLANKPWVEAIQR-----GEYRSWIETNYASRMR 357 >gi|261409577|ref|YP_003245818.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] gi|261286040|gb|ACX68011.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] Length = 341 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/334 (50%), Positives = 232/334 (69%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ K +++ +D LTYAGNL +LK + + ++F+ DI Sbjct: 1 MKLLVTGGAGFIGSNFVIYMLQQYPKYEIVNMDALTYAGNLENLKSVENNANYTFINADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++E + ++ Q + +VNFAAESHVDRSIL + F+ TN++GT +LL+ + Sbjct: 61 ANKEAVEQIFEQHQIEVVVNFAAESHVDRSILEPEVFVNTNVLGTQVLLDAAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +F+Q+STDEVYGSL + GLF+E+ P P+SPYSA+KA D LV A+ T+G+P Sbjct: 114 --KHNVTKFVQVSTDEVYGSLGETGLFTEETPLAPNSPYSASKAGGDLLVRAYHETFGLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP FPEKLIPL I+R + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 172 VNITRCSNNYGPLQFPEKLIPLMISRALNDEALPVYGDGLNIRDWLYVEDHCSAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YNIGGNNER N+ IV +I L + P+S LI +++DRPGHDRRY ID Sbjct: 232 KGVSGEVYNIGGNNERTNVHIVQKI--LQELGKPES-----LISYVDDRPGHDRRYGIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KI +E+GW P+ N E+G+ +T+ WYLDN WW+ Sbjct: 285 TKIMNELGWKPKHNFETGIKETIQWYLDNKEWWQ 318 >gi|254516001|ref|ZP_05128061.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium NOR5-3] gi|219675723|gb|EED32089.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium NOR5-3] Length = 349 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 182/351 (51%), Positives = 226/351 (64%), Gaps = 21/351 (5%) Query: 4 IVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIGS Y +N + +V+ D LTYAGN +L + FSF+ DICD Sbjct: 1 MVTGAAGFIGSNFVHYWLNTHPEDRVIGYDALTYAGNRANLAAVEAKQNFSFVHADICDE 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L + D +V+FAAESHVDRSI G D FI TNIIGT LL+ R W L D Sbjct: 61 SRVTQLLSDESVDTLVHFAAESHVDRSITGPDAFIETNIIGTHSLLKAARSVW--LGGDG 118 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF +STDEVYGSL D F E Y P+SPYSA+KA+SD+LV A+ HTYG+ V Sbjct: 119 KPH-RFHHVSTDEVYGSLAPDAPGFFEAQQYQPNSPYSASKAASDHLVRAYHHTYGLAVT 177 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNCSNNYGP+HFPEKLIPL +T ++ G + +YGDG N+RDWLYVEDH R + LVL KG Sbjct: 178 TSNCSNNYGPFHFPEKLIPLCMTNILRGLALPVYGDGSNIRDWLYVEDHCRGIDLVLNKG 237 Query: 241 RIGERYNIGGNNERKNIDIV------FEIGFLLDALIPKSY---------SHTELIRFIE 285 +GE YNIGGNNE N+ IV + F D + + Y S + LIRF+ Sbjct: 238 EVGESYNIGGNNEWNNLAIVNLLCERLDARFTSDPSLKERYPDAPQCRGESASSLIRFVT 297 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 DR GHD RYAID+S+I SE+G+ P E E+G+ +T+ WYLDN WWRPL + Sbjct: 298 DRAGHDWRYAIDASRIMSELGYAPAETFETGIERTLDWYLDNESWWRPLVQ 348 >gi|289577886|ref|YP_003476513.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter italicus Ab9] gi|289527599|gb|ADD01951.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter italicus Ab9] Length = 349 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 169/335 (50%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS +Y+++ K +++ +DKLTYAGNL +LK++ + ++F++ DI Sbjct: 1 MKILVTGGAGFIGSNFIKYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E I + D +VNFAAESHVDRSI+ + F+ TN++GT LL + W Sbjct: 61 CDKELIEEIFSQ-DIDYVVNFAAESHVDRSIIDPEIFVKTNVLGTVTLLNAAKKAWEQGD 119 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ + +FLQ+STDEVYGSL + G F+E P +P SPYS++KA++D +V A+ TY +P Sbjct: 120 SFKEGK-KFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTYKMP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDWLYVEDH +A+ LVL Sbjct: 179 VNITRCSNNYGPYQFPEKLIPLMINNCLNKKPLPVYGDGLNVRDWLYVEDHCKAIDLVLH 238 Query: 239 KGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR+GE YNIGGNNE+ NI+IV + ++ D + P LI F+ DR GHDRRYAID Sbjct: 239 KGRVGEVYNIGGNNEKTNIEIVKLIVSYIHDNVDPT--VDESLITFVADRKGHDRRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++KIK E+GW+P+ E G+ KT+ WYL N W + Sbjct: 297 ATKIKEELGWYPETKFEDGIKKTIEWYLKNREWLK 331 >gi|171909510|ref|ZP_02924980.1| dTDP-glucose 4,6-dehydratase, putative [Verrucomicrobium spinosum DSM 4136] Length = 359 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 171/339 (50%), Positives = 228/339 (67%), Gaps = 10/339 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ-------VLVIDKLTYAGNLNSLKEISQSNLFSF 54 R++VTGGAGFIGS L YL+ + + V+ +DKLTYAGN +SL ++ Sbjct: 5 RILVTGGAGFIGSNLVHYLLGKAEQEHGITVSKVVNLDKLTYAGNRSSLASLADDPRHVL 64 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI + E + L+++ +AI++ AAESHVDRSI +EFI TN +GTF LL+ R++ Sbjct: 65 VEGDIQNSELVAFLLRKYNLNAIMHLAAESHVDRSIDSPEEFIMTNFVGTFKLLDAARVY 124 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + FRFL +STDEV+GSL FSE PY P+SPYSA+KA SD+L ++ Sbjct: 125 HKERQAAGQSDFRFLHVSTDEVFGSLGPSDPAFSETTPYAPNSPYSASKAGSDHLARSYV 184 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 HT+ +PV+ +NCSNNYGP+ FPEKL+PL I ++I G + +YGDG NVRDWLYVEDH R Sbjct: 185 HTFHLPVVTTNCSNNYGPFQFPEKLMPLMIQKVIRGEKLPVYGDGSNVRDWLYVEDHCRG 244 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHD 291 L L + KG IGE YNIGG E KNI++V + ++A P + ELI F++DRPGHD Sbjct: 245 LTLAMLKGEIGETYNIGGKCEMKNIEVVHALINAVNAERPDLNRDPAELITFVKDRPGHD 304 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID +KI E+GW PQE +SG+ KTV WYLD+ W Sbjct: 305 RRYAIDCTKIGRELGWQPQETFDSGMRKTVRWYLDHANW 343 >gi|87303234|ref|ZP_01086027.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. WH 5701] gi|87282129|gb|EAQ74090.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. WH 5701] Length = 357 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 222/337 (65%), Gaps = 7/337 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFI L + D +++V+D LTYAGN +++ + +S F+ DI D Sbjct: 5 LLITGGAGFIAGNLTHHWAADHPGDRIVVLDALTYAGNRATIQPLIESGRIRFVHGDIGD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + L E + + AAESHVDRSI G F+ TN+ GTF LLE R W LS Sbjct: 65 RPLVDALLAEHAITHVAHLAAESHVDRSITGPGAFLATNVNGTFTLLEAFRDHW--LSAG 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +RFL +STDEV+GSL+ F E Y+P SPY+A+KA+SD+L AW HTYG+PV Sbjct: 123 SPTDWRFLHVSTDEVFGSLEPSDPPFCETTAYSPRSPYAASKAASDHLARAWQHTYGLPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L+SNCSNNYGP+HFPEKLIPL + ++ G + +YGDG NVRDWLYVEDH RAL +L Sbjct: 183 LVSNCSNNYGPFHFPEKLIPLTLINILLGRPIPVYGDGSNVRDWLYVEDHCRALDRILLA 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAID 297 G G Y IGG NE N+D+V + L+D L P ELIRF+ DRPGHDRRYAID Sbjct: 243 GEPGRTYCIGGCNEVANLDLVGMLCALMDELAPDLPVRPSRELIRFVTDRPGHDRRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++I+ E+GW PQ ++ GL +TV WYL N WW+PL Sbjct: 303 ATRIREELGWQPQVTVQEGLRRTVQWYLANREWWQPL 339 >gi|170729448|ref|YP_001774881.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa M12] gi|167964241|gb|ACA11251.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa M12] Length = 353 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 170/336 (50%), Positives = 225/336 (66%), Gaps = 4/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG ++ L +V+ +D LTYAG+L +L + F+ DI DR Sbjct: 7 LVTGGAGFIGGNFVLQAIS-LGHRVINLDALTYAGHLETLAALDGCAEHLFVHGDIGDRA 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L +PDA++NFAAESHVDRSI FI TN++G +LLE +W L + + Sbjct: 66 LVSCLLDTHRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGALLLLEAVCGYWKALPEAAR 125 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSL + G F+E Y P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 126 ATFRFLHVSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 185 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +CSNNYGPYHFPEKLIPL IT+ + G + +YGDG++VRDWL+V DH AL VL GR+ Sbjct: 186 HCSNNYGPYHFPEKLIPLVITKALAGEPLPVYGDGRHVRDWLFVGDHCTALCAVLAGGRV 245 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG ER+N+++V I LLD P++ S+ I + DRPGHDRRYAID+SK Sbjct: 246 GETYNIGGQAERENLEVVRMICCLLDERRPRADGLSYQSQIVHVADRPGHDRRYAIDTSK 305 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + +++GW P E GL TV WYL + W R + + Sbjct: 306 LVNQLGWAPVYRFEQGLALTVDWYLQHQDWVRAVLQ 341 >gi|331086194|ref|ZP_08335276.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406353|gb|EGG85867.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 360 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 224/338 (66%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +DKLTYAGNL +LK I ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDKLTYAGNLENLKGIEDRENYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I +E D +V+FAAESHVDRSI D F+ TN++GT ++L + W Sbjct: 65 ADAINKIFEENDIDRVVHFAAESHVDRSIKNPDVFVKTNVLGTLVMLNAAKAAWELEDGT 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +FL +STDEVYGSL+ F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 125 FKADKKFLHVSTDEVYGSLENEGEYFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G ++ +YGDG+NVRDWLYVEDH + + +V +K Sbjct: 185 NITNCSNNYGPYQFPEKLIPLIINNALQGKNLPVYGDGKNVRDWLYVEDHAKGIDMVQEK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI+I+ I L ++P K ELI ++EDR GHDRRY Sbjct: 245 GRLFETYNIGGHNEKQNIEIIHIILNTLQEMLPEGDPRKELVSEELITYVEDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KIK EIGW+P+ E G+ T+ W+ +N W + Sbjct: 305 AIAPDKIKEEIGWYPETKFEDGIKLTIKWFFENEEWMK 342 >gi|329113801|ref|ZP_08242572.1| dTDP-glucose 4,6-dehydratase [Acetobacter pomorum DM001] gi|326696811|gb|EGE48481.1| dTDP-glucose 4,6-dehydratase [Acetobacter pomorum DM001] Length = 352 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 157/334 (47%), Positives = 223/334 (66%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGG GFIGSA+ R+++++ VL +D +TYA + ++++ +S ++F Q +I Sbjct: 1 MRILLTGGCGFIGSAVIRHIIHNTSHSVLNVDCMTYAASPETVEDAPESERYTFSQTNII 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + F+PDA+++ AAESHVDRSI G FI TN++GT+ +LE R +W L + Sbjct: 61 DTPALEKLFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMTLDK 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ FRF ISTDEV+G+L + F+E PY+P SPYSA+KASSD+LV AW HT+G+P Sbjct: 121 EAQEAFRFHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL IEG + +YG G NVRDWL+VEDH AL ++ Sbjct: 181 TFVTNTTNNYGIWHFPEKLIPLITINAIEGKELPVYGKGDNVRDWLFVEDHAEALVKAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAID 297 G+ GE Y IG R N+++V I +LD L P + H LIR++ DRPGHD RY ID Sbjct: 241 TGKPGETYAIGARQPRTNLEVVQTICRILDELSPDAAGPHERLIRYVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S + + W + N E+G+ +TV WYLDN WW Sbjct: 301 PSHAEKALDWKAKHNFETGIRRTVQWYLDNRAWW 334 >gi|330944865|gb|EGH46725.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 329 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 162/275 (58%), Positives = 205/275 (74%), Gaps = 2/275 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 51 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 110 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR WW L + Sbjct: 111 DQARVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAWWLKLPE 170 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF ISTDEVYG L LF+E PY PSSPYSA+KA+SD+LV AW TYG+P Sbjct: 171 AQRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP 230 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+HFPEKLIPL I + G + +YG+G VRDWLYVEDH RAL V+ Sbjct: 231 VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT 290 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +G +GE YNIGG+NE+KNID+V I LL+ L P+ Sbjct: 291 EGEVGETYNIGGHNEQKNIDVVRGICALLNELAPQ 325 >gi|154505988|ref|ZP_02042726.1| hypothetical protein RUMGNA_03530 [Ruminococcus gnavus ATCC 29149] gi|153793487|gb|EDN75907.1| hypothetical protein RUMGNA_03530 [Ruminococcus gnavus ATCC 29149] Length = 358 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 227/338 (67%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDKLTYAGNLENLKDIEDRENYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I +E + D +V+FAAESHVDRSI D F+ TN++GT ++L + W Sbjct: 65 ADAINKIFEENEIDRVVHFAAESHVDRSIKNPDVFVKTNVLGTLVMLNAAKAAWELPDGT 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL++ F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 125 FKEGKKFLHVSTDEVYGSLEEEGEYFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G ++ +YGDG+NVRDWLYVEDH + + +V +K Sbjct: 185 NITNCSNNYGPYQFPEKLIPLIINNALQGKNLPVYGDGKNVRDWLYVEDHAKGIDMVQEK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----LIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI I+ I L ++P+ E LI ++EDR GHDRRY Sbjct: 245 GRLFETYNIGGHNEKQNIQIIHIILDTLQEMLPEGDPRKELVSEKLITYVEDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KIK E+GW+P+ E G+ T+ W+ +N W + Sbjct: 305 AIAPDKIKEEVGWYPETMFEDGIRLTIKWFFENEEWMK 342 >gi|308274095|emb|CBX30694.1| dTDP-glucose 4,6-dehydratase [uncultured Desulfobacterium sp.] Length = 352 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 230/335 (68%), Gaps = 14/335 (4%) Query: 3 LIVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIGS RYL + D +V+ IDKLTYAGN +L I ++ N + F + D Sbjct: 4 ILVTGGCGFIGSNFIRYLFSETDFNGRVVNIDKLTYAGNPENLAGIKEAFPNRYFFNKTD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+ + + F+ DAI +FAAESHVDRSI +FI +NI GTF LLE R Sbjct: 64 ICNLSELTGLFETFEIDAICHFAAESHVDRSITNPGDFIHSNIEGTFCLLELAR------ 117 Query: 119 SQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q+K F +STDEV+GSL K G F+E PYNPSSPYSA+KASSD+L+ A+ TYG+ Sbjct: 118 -QNKNKLELFHHVSTDEVFGSLGKSGYFTETTPYNPSSPYSASKASSDHLIRAYSVTYGV 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +SNCSNNYGPY FPEKLIPL I IE + +YG+G N+RDWLYVEDH +A++ ++ Sbjct: 177 PATISNCSNNYGPYQFPEKLIPLMILNAIEDKALPVYGEGINIRDWLYVEDHCKAIWAIM 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--LIRFIEDRPGHDRRYA 295 + GR GE YNIGG E++NIDIV I L+D LIP + + + LI F++DRPGHD RYA Sbjct: 237 QHGRRGETYNIGGGCEKRNIDIVNIICELVDKLIPDTNTAPKKNLITFVKDRPGHDLRYA 296 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D SK+K+E+ W P E ESG+ KT+ WY++N W Sbjct: 297 MDFSKLKNELNWTPAETFESGIEKTIKWYIENTNW 331 >gi|222054966|ref|YP_002537328.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. FRC-32] gi|221564255|gb|ACM20227.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. FRC-32] Length = 358 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 172/331 (51%), Positives = 230/331 (69%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS ++ + +++ +D LTYAGNL +LKE+ ++ + F++ DICD Sbjct: 10 VLVTGGAGFIGSNFINSFMPANPGCRIINLDLLTYAGNLENLKEVENNHCYRFVKGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + DA+V+FAAESHVDRSI G + F+ TN++GT +LLEE+R W Sbjct: 70 ASLVARLLVEEKIDAVVHFAAESHVDRSITGPEVFVRTNVLGTQVLLEESRKHWQA---K 126 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 QFR+LQ+STDEVYGSL D G F+E+ P P+SPYSA+K +D LV A+ TYG P L Sbjct: 127 VVPQFRYLQVSTDEVYGSLGDTGFFTEETPLAPNSPYSASKTGADLLVRAYHETYGFPTL 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGP HFPEKLIPL I ++ + +YGDG NVRDWL+V+DH A+ VLK G Sbjct: 187 NTRCSNNYGPCHFPEKLIPLMIHNIMNRKPLPVYGDGLNVRDWLHVKDHSIAIETVLKTG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 R+G+ YNIGGNNE KNIDIV + LLD + ++ +LI F++DRPGHDRRYAID+S Sbjct: 247 RLGQVYNIGGNNEWKNIDIVNLVCDLLDGRLGRAEGENRQLITFVKDRPGHDRRYAIDAS 306 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E G+ +T+ WYL N W Sbjct: 307 KMRRELGWEPSYTFERGIAETIDWYLANQDW 337 >gi|157413786|ref|YP_001484652.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9215] gi|157388361|gb|ABV51066.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9215] Length = 345 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 160/343 (46%), Positives = 240/343 (69%), Gaps = 10/343 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSF 54 +++++TGGAGFIG AL R L+ + + +D L+Y+ +L S+ + QS + F Sbjct: 5 IKVLITGGAGFIGGALIRKLLKESNYNIFNLDNLSYSSDLKSIDSLIQSLGKNTQKRYKF 64 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI ++E + + ++E +P+ I + AAE+HVD+SI+ + FI +NI+GTF LLE + + Sbjct: 65 IKGDISNKETVENVIQETKPELIFHLAAETHVDKSIIYPENFILSNILGTFNLLESSLNY 124 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + +K+ +F+F+ ISTDEV+GSL + G F+E+ Y+P SPYSA+KASSD+LV AW H Sbjct: 125 YKKIDPEKQKKFKFIHISTDEVFGSLPQNGFFNENTKYDPRSPYSASKASSDHLVKAWFH 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P +++NCSNNYGP+ +PEKLIP I++ I+ ++ +YG G+N+RDWLYVEDH+ A+ Sbjct: 185 TYDLPCIITNCSNNYGPWQYPEKLIPNIISKAIQQKNISIYGSGKNIRDWLYVEDHIDAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ KG G+ Y IGGNNE+ N+D+ +I LD + P+ SH LI+F++DR GHD R Sbjct: 245 LLIADKGLPGKNYCIGGNNEKTNLDVAEKICNYLDEINPQINSHKSLIKFVKDRAGHDFR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 YAID+S IK E+ W P+ N E GL T+ WYL+N W LYK Sbjct: 305 YAIDASLIKQELNWSPKHNFEDGLKNTIDWYLNNKSW---LYK 344 >gi|229154497|ref|ZP_04282614.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 4342] gi|228628895|gb|EEK85605.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 4342] Length = 348 Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 182/354 (51%), Positives = 241/354 (68%), Gaps = 13/354 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++TGGAGFIGS + V + ID LTYAGNL SLKEI + + F ++DI Sbjct: 1 MIYLITGGAGFIGSNFLNHFVTQFPQHTFINIDSLTYAGNLQSLKEIENKDNYHFRKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E + E QPD I++FAAESHVDRSI G EFI TNIIGTF LLE R W Sbjct: 61 SKLEEVEHVFNEIQPDRIIHFAAESHVDRSIKGPKEFIETNIIGTFNLLEVCRKNWESF- 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +DK F +STDEV+G+L+K G F+E PY+PSSPYSA+KASSD+LV A+ TYG+P Sbjct: 120 EDK----LFHHVSTDEVFGTLEKDGFFTEKTPYSPSSPYSASKASSDHLVRAYHQTYGLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++NCSNNYGP+ FPEKLIPL I ++ G + +YG+G+NVRDWLYV DH A++ V++ Sbjct: 176 ITITNCSNNYGPFQFPEKLIPLVIQNLLRGKEIPIYGEGENVRDWLYVIDHCEAIWAVIE 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAID 297 KG+ GE YNIGGNNER NI++V + ++ ++ + ELI +++DRPGHD RYAID Sbjct: 236 KGKRGETYNIGGNNERNNIEVVKTLCQIISEYTGENIQKYLELITYVKDRPGHDYRYAID 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 +K++ E+GWFP+E ++GL KTV WYL+N W + + K+ DY W N N Sbjct: 296 PTKVQKELGWFPKETFDTGLRKTVNWYLENEQWIQSVLKD-----DYQNWINKN 344 >gi|326391868|ref|ZP_08213380.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter ethanolicus JW 200] gi|325992086|gb|EGD50566.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter ethanolicus JW 200] Length = 349 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS +Y+++ K +++ +DKLTYAGNL +LK++ + ++F++ DI Sbjct: 1 MKILVTGGAGFIGSNFIKYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E + + D +VNFAAESHVDRSI+ + F+ TN++GT LL + W Sbjct: 61 CDKELVEEIFSQ-DIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGD 119 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ + +FLQ+STDEVYGSL + G F+E+ P +P SPYS++KA++D +V A+ TY +P Sbjct: 120 SFKEGK-KFLQVSTDEVYGSLGETGYFTENTPLDPHSPYSSSKAAADLIVKAYYDTYKMP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPY FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ LVL Sbjct: 179 INITRCSNNYGPYQFPEKLIPLMINNCLNKKPLPVYGDGLNIRDWLYVEDHCKAIDLVLH 238 Query: 239 KGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR+GE YNIGGNNE+ NI+IV + ++ D + P LI ++ DR GHDRRYAID Sbjct: 239 KGRVGEVYNIGGNNEKTNIEIVKLIVSYIHDNVDPT--VDESLITYVADRKGHDRRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++KIK E+GW+P+ E G+ KT+ WYL N W + Sbjct: 297 ATKIKEELGWYPETKFEDGIKKTIEWYLQNREWLK 331 >gi|258543634|ref|YP_003189067.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256634712|dbj|BAI00688.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256637768|dbj|BAI03737.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-03] gi|256640822|dbj|BAI06784.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-07] gi|256643877|dbj|BAI09832.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-22] gi|256646932|dbj|BAI12880.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-26] gi|256649985|dbj|BAI15926.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-32] gi|256652975|dbj|BAI18909.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656029|dbj|BAI21956.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 223/334 (66%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGG GFIGSA+ R+++++ VL +D +TYA + ++++ +S ++F Q +I Sbjct: 1 MRILLTGGCGFIGSAVIRHIIHNTSHSVLNVDCMTYAASPETVEDAPESERYTFSQTNIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + F+PDA+++ AAESHVDRSI G FI TN++GT+ +LE R +W L + Sbjct: 61 DTPALEKLFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMGLDK 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + FRF ISTDEV+G+L + F+E PY+P SPYSA+KASSD+LV AW HT+G+P Sbjct: 121 EAQQAFRFHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL IEG + +YG G NVRDWL+VEDH AL ++ Sbjct: 181 TFVTNTTNNYGIWHFPEKLIPLITINAIEGKELPVYGKGDNVRDWLFVEDHAEALVKAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG+ GE Y IG R N+++V I +LD L P + E LIR++ DRPGHD RY ID Sbjct: 241 KGKPGETYAIGARQPRTNLEVVQTICRILDELCPDATGPRERLIRYVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S + + W + N E+G+ +TV WYLDN WW Sbjct: 301 PSHAEQALDWKAKHNFETGIRRTVQWYLDNRTWW 334 >gi|320535550|ref|ZP_08035650.1| dTDP-glucose 4,6-dehydratase [Treponema phagedenis F0421] gi|320147611|gb|EFW39127.1| dTDP-glucose 4,6-dehydratase [Treponema phagedenis F0421] Length = 376 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 169/339 (49%), Positives = 234/339 (69%), Gaps = 14/339 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQS---NLFSFLQ 56 ++VTGGAGFIGS L+ND K +++ +D LTYAGN +L ++ ++ +SF+ Sbjct: 21 ILVTGGAGFIGSNFIHSLLNDKKNFTGRIINLDALTYAGNALNLDDVEKTFGTKRYSFVH 80 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +ICD+E + + E+ D +VNFAAESHVDRSILG + F+ TN++GTF LLE + +W Sbjct: 81 GNICDKEIVDTIFNEYNIDTVVNFAAESHVDRSILGPEVFLKTNVLGTFTLLEIAKKYWQ 140 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ F ISTDEVYGSL +GLF E PY+P SPYSA+KASSD++V A+ HTY Sbjct: 141 TKDGSMREDVLFHHISTDEVYGSLGAEGLFKETTPYDPRSPYSASKASSDHIVKAYFHTY 200 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +SNCSNNYGP+ FPEKLIPL I M+EG + +YGDG+ +RDW++V+DH A++L Sbjct: 201 GLPVTISNCSNNYGPFQFPEKLIPLMILNMLEGKDLPVYGDGKQIRDWIHVKDHNEAVFL 260 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR----FIEDRPGHD 291 +L+ GR+GE YNIGG NE +NI ++ + L++ + K+ E ++ + DR GHD Sbjct: 261 ILENGRLGETYNIGGENEWENIKLLHK---LIEIVCSKAGLDIEKVKSTITHVTDRLGHD 317 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID +KIK E+GW + ESGL TV WYL+N W Sbjct: 318 RRYAIDCTKIKQELGWHRNFDFESGLTDTVNWYLNNKEW 356 >gi|258542880|ref|YP_003188313.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256633958|dbj|BAH99933.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256637018|dbj|BAI02987.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-03] gi|256640070|dbj|BAI06032.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-07] gi|256643127|dbj|BAI09082.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-22] gi|256646182|dbj|BAI12130.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-26] gi|256649234|dbj|BAI15175.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-32] gi|256652221|dbj|BAI18155.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655278|dbj|BAI21205.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 223/334 (66%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGG GFIGSA+ R+++++ VL +D +TYA + ++++ +S ++F Q +I Sbjct: 1 MRILLTGGCGFIGSAVIRHIIHNTSHSVLNVDCMTYAASPEAVEDAPESERYTFSQTNIT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + F+PDA+++ AAESHVDRSI G FI TN++GT+ +LE R +W L + Sbjct: 61 DTPALEKLFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMGLDK 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + FRF ISTDEV+G+L + F+E PY+P SPYSA+KASSD+LV AW HT+G+P Sbjct: 121 EAQQAFRFHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTFGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL IEG + +YG G NVRDWL+VEDH AL ++ Sbjct: 181 TFVTNTTNNYGIWHFPEKLIPLITINAIEGKELPVYGKGDNVRDWLFVEDHAEALVKAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG+ GE Y IG R N+++V I +LD L P + E LIR++ DRPGHD RY ID Sbjct: 241 KGKPGETYAIGARQPRTNLEVVQTICRILDELCPDATGPRERLIRYVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S + + W + N E+G+ +TV WYLDN WW Sbjct: 301 PSHAEQALDWKAKHNFETGIRRTVQWYLDNRTWW 334 >gi|260436557|ref|ZP_05790527.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. WH 8109] gi|260414431|gb|EEX07727.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. WH 8109] Length = 374 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 168/336 (50%), Positives = 228/336 (67%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGGAGFIG A+ R L+ + + V +DK+ YA +L+S++E+ + ++ Sbjct: 17 RVLVTGGAGFIGGAVIRRLLQETTVTVFNLDKMGYASDLSSIEEVLNQLGGAANDRHRLQ 76 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +VD+ + + +A++E PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R + Sbjct: 77 KVDLTNAAAVEAAVQEADPDLVMHLAAESHVDRSICGPGVFIESNVNGTYNLLQAVRSHY 136 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 LS +++D FR ISTDEV+GSL +G FSE PY+P SPYSA+KA+SD+LV AW HT Sbjct: 137 EGLSGERRDAFRMHHISTDEVFGSLGPEGRFSETTPYDPRSPYSASKAASDHLVQAWHHT 196 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+PV+L+NCSNNYGP+ FPEKLIP+ + G + LYGDG NVRDWLYVEDHV AL Sbjct: 197 FGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAGGESIPLYGDGLNVRDWLYVEDHVDALL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L KG G Y +GG+ ER N ++V I LD P S H +LI + DRPGHDRRY Sbjct: 257 LAACKGASGRSYCVGGHGERTNKEVVHAICQQLDLSRPASAPHADLITPVTDRPGHDRRY 316 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID +I SE+GW P+ N+E GL +TV WYL + W Sbjct: 317 AIDPGRISSELGWRPRHNVEEGLAETVHWYLSHQEW 352 >gi|229175941|ref|ZP_04303438.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus MM3] gi|228607535|gb|EEK64860.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus MM3] Length = 340 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/334 (52%), Positives = 231/334 (69%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS RY+V LV +D LTYAGNL +LKEI + F++ DI Sbjct: 1 MKVLVTGGAGFIGSNFVRYMVKKYPEYNLVNLDALTYAGNLENLKEIESLPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I KE + D ++NFAAESHVDRSI D FI TNI GT +LL+ + + Sbjct: 61 ADREFINRLFKEEKFDYVLNFAAESHVDRSITNPDIFIQTNIQGTQVLLDAAKN-----A 115 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q KK +LQ+STDEVYG+L D G FSE+ P +SPYS++KA +D LV A+ T+G+P Sbjct: 116 QVKK----YLQVSTDEVYGTLGDTGYFSEETPLASNSPYSSSKAGADLLVRAYHETFGLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL I + + +YGDG NVRDWL+VEDH +A+ LVL Sbjct: 172 VNITRCSNNYGPFHFPEKLIPLMIINALNNKQLPVYGDGLNVRDWLHVEDHCQAIDLVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YN+GGNNER NI+IV I LD P+S LI+++ DRPGHDRRYAID+ Sbjct: 232 KGENGEVYNVGGNNERTNIEIVKTILKALDK--PES-----LIQYVTDRPGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +K++ E+GW P+ N ++G+ +T+ WYL+N WW Sbjct: 285 TKLREELGWSPKYNFDTGIEQTINWYLENQDWWE 318 >gi|94264211|ref|ZP_01288007.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] gi|93455386|gb|EAT05587.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] Length = 353 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 175/331 (52%), Positives = 219/331 (66%), Gaps = 3/331 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG AGFIGS + V+ +DKLTYAGNL +++++ F+Q DI DR Sbjct: 2 ILVTGCAGFIGSNFVIDWLASQGESVVNLDKLTYAGNLANIRDLVGDERHIFVQGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L +P A++NFAAESHVDRSI G D FI TN++GTF LL +W L D+ Sbjct: 62 ALVTELLTRHRPRAVINFAAESHVDRSIHGPDLFIQTNVVGTFNLLAVVLAYWRQLDSDQ 121 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FR L +STDEVYGSL D+ F+E PY P+SPY+A+KA+SD+LV A TYG+PVL Sbjct: 122 QADFRLLHVSTDEVYGSLGPDEPAFNEATPYRPNSPYAASKAASDHLVRACFRTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGPY FPEKLIPL I + G + +YGDG NVRDWLYV DH A+ VL G Sbjct: 182 TTNCSNNYGPYQFPEKLIPLLIVNALGGVPLPIYGDGLNVRDWLYVGDHCAAIRRVLAAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIGG NE NI+IV ++ LLD L P + + LI ++ DRPGHDRRYAID+ Sbjct: 242 VPGEVYNIGGCNEITNIEIVHKVCTLLDQLRPDPAGPYARLISYVPDRPGHDRRYAIDAR 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+ W P E SGL KTV WYL N W Sbjct: 302 KIERELNWQPAETFTSGLAKTVAWYLANPEW 332 >gi|304314128|ref|YP_003849275.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] gi|302587587|gb|ADL57962.1| predicted dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] Length = 336 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 225/331 (67%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS RY++ + +++ +D LTY GNL +L + + F++ I D Sbjct: 3 RILVTGGAGFIGSNFIRYMLENHSYEIINLDALTYCGNLENLAGVEDDPRYIFVKGSITD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + + E D +VNFAAESHVDRSI FI TN++GT LLE +R Sbjct: 63 KELVNDLIAE--SDVVVNFAAESHVDRSIEDPGIFIRTNVMGTQTLLEASR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ RF+QISTDEVYGS ++G F+E+ P P+SPYSA+KAS+D + A+ TYG+PV + Sbjct: 112 RQGVERFIQISTDEVYGSTEEGYFTEETPLAPNSPYSASKASADLIARAYNRTYGLPVNI 171 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL IT +E + +YGDG NVRDW++V DH RA+ LVL GR Sbjct: 172 TRCSNNYGPYQFPEKLIPLMITNALEDKPLPVYGDGMNVRDWIHVRDHCRAIDLVLHGGR 231 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSK 300 GE YNIG N+ER+NI+IV LI + E LIRF+EDRPGHDRRYAID+SK Sbjct: 232 AGEVYNIGSNSERRNIEIV--------ELILRELGKDESLIRFVEDRPGHDRRYAIDASK 283 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 I+SE+GW P + E G+ +T+ WY+DN WW Sbjct: 284 IRSELGWKPCYSFEEGIRETIKWYIDNREWW 314 >gi|85859148|ref|YP_461350.1| dTDP-glucose 4,6-dehydratase [Syntrophus aciditrophicus SB] gi|85722239|gb|ABC77182.1| dTDP-glucose 4,6-dehydratase [Syntrophus aciditrophicus SB] Length = 363 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/336 (50%), Positives = 233/336 (69%), Gaps = 16/336 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 L+VTGG GFIGS RYL+ + +++ +DKLTYAGN +L +++ + F + D Sbjct: 6 LMVTGGCGFIGSNFIRYLLEEANFAGRIVNVDKLTYAGNPENLAGLAEKFGERYCFEKAD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + +++ E++ DA+ +FAAESHVDRSI + FI TNI+GTF LLE L Sbjct: 66 ICDADRMKAIFAEYEIDAVCHFAAESHVDRSIRRPESFIQTNIVGTFNLLE--------L 117 Query: 119 SQDKKDQFR-FLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ + D+F+ F +STDEVYGSL +G F+E+ PY P+SPYSA+KASSD+LV A+ TYG Sbjct: 118 ARARGDRFQIFHHVSTDEVYGSLGPEGYFTEETPYRPNSPYSASKASSDHLVRAYHVTYG 177 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ LSNCSNNYGPY FPEKLIPL + +EG + +YGDG+NVRDWLYV DH A++ + Sbjct: 178 LPITLSNCSNNYGPYQFPEKLIPLIVINALEGKTLPVYGDGKNVRDWLYVRDHCEAIWTI 237 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRY 294 + GR GE YN+GG +E +NI IV I +LD + P S ELI F+ DRPGHD RY Sbjct: 238 MNSGRRGETYNVGGQSEMENIAIVRLICDILDEVRPAGDGKSRQELITFVADRPGHDHRY 297 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID +K+ +E+ W P+E+ +GL +T+ WYLDN W Sbjct: 298 AIDFTKLNAELKWSPRESFTTGLRRTINWYLDNPGW 333 >gi|10800781|emb|CAC12984.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter xylinus] Length = 349 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 162/330 (49%), Positives = 215/330 (65%), Gaps = 3/330 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSA+ R L++ +VL +D LTYA ++ + + +QS + +I Sbjct: 1 MRILVTGGCGFIGSAVVRRLIDQTTHEVLNVDALTYAASIKATEAAAQSGRYRLEVANII 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + EF PDA+++ AAESHVDRSI G F++TNI+GT+ LLE R WW+ Sbjct: 61 DAASMERIFAEFSPDAVMHLAAESHVDRSIDGPGTFVSTNIVGTYTLLEAARKWWARQDA 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ FRF ISTDEV+G+L G F+E PY+P SPYSA+KASSD+LV AW HTYG+P Sbjct: 121 ERRKAFRFHHISTDEVFGALQPGDPPFTERTPYDPRSPYSASKASSDHLVRAWYHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +NNYGP+HFPEKLIPL IEG + +YG GQNVRDWL+VEDH AL ++ Sbjct: 181 TDDRNTTNNYGPWHFPEKLIPLVTINAIEGRELPVYGTGQNVRDWLFVEDHAEALVRAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAID 297 G+ GE Y IG R N+ +V I +LD L P + H LIR + DRPGHD RY ID Sbjct: 241 CGQPGETYAIGARQPRTNMQVVETICTILDELHPDLAGPHARLIRHVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + + +GW + + E G+ +TV WYLDN Sbjct: 301 PTHAEQALGWHARLDFEHGIRRTVQWYLDN 330 >gi|254788156|ref|YP_003075585.1| dTDP-glucose 4,6-dehydratase [Teredinibacter turnerae T7901] gi|237683510|gb|ACR10774.1| dTDP-glucose 4,6-dehydratase [Teredinibacter turnerae T7901] Length = 356 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 177/353 (50%), Positives = 230/353 (65%), Gaps = 21/353 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG+ Y + +V+V+D LTYAGN +L + F F++ DI D Sbjct: 5 LLVTGGAGFIGANFVHYWLETYPADRVIVLDALTYAGNPANLTAVESVENFRFVKGDILD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L++ D +V+FAAESHVDRSI G D FI TNI+GT LL+ + W L + Sbjct: 65 QPLVEQLLRDNSVDTLVHFAAESHVDRSITGPDAFIETNIVGTHTLLKAAKKVW--LDEG 122 Query: 122 K-KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ RF ISTDEVYG+L + FSE PY P+SPYSA+KA+SD+LV ++ HTYG+ Sbjct: 123 LCKEGHRFHHISTDEVYGTLGPNDPAFSETTPYAPNSPYSASKAASDHLVRSYLHTYGLQ 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP+HFPEKLIPL IT ++ + +YGDG+ +RDWLYV DH R + LVL+ Sbjct: 183 VTTSNCSNNYGPFHFPEKLIPLIITNILRDRKLPVYGDGKQIRDWLYVTDHARGIDLVLR 242 Query: 239 KGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPKSYS-----HTELIRF 283 KG +GE YNIGG NE NIDIV F +L P + S +LI F Sbjct: 243 KGVVGESYNIGGINEWANIDIVQLVCKLMNERFAASSVLAERFPNARSAIAGTAADLIEF 302 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + DRPGHDRRYAID +K +E+G+ PQE+ ++G+ KT+ WYLDN WW PL K Sbjct: 303 VTDRPGHDRRYAIDPTKANAELGYKPQESFDTGIAKTIDWYLDNQEWWSPLIK 355 >gi|115358133|ref|YP_775271.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] gi|115283421|gb|ABI88937.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] Length = 338 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 168/331 (50%), Positives = 228/331 (68%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L++ D ++ V+ +D LTYAG+L++L ++ ++ F++ DIC Sbjct: 8 VLVTGGAGFIGANFVRHLLDSDPQVSVVTLDLLTYAGSLDNLGDDMPGADRHRFVRGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR + S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 68 DRPLVESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRELWLNDQK 127 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D + RF I TDEVYGSL D FSE PY P+SPYSATKASSD+LV A+ HT Sbjct: 128 LGRTDAHARRRFHHIGTDEVYGSLGPDDPPFSETTPYAPNSPYSATKASSDHLVRAYFHT 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I ++G+ + +YGDG NVRDWLYV+DH RA+ Sbjct: 188 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVDGTDIPVYGDGANVRDWLYVDDHCRAID 247 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G +GE YN+GG NE +N+DIV I LLD P+ H L+RF+ DRPGHDRRY Sbjct: 248 AVIRRGTVGETYNVGGWNEWRNVDIVALICVLLDERRPERAPHARLVRFVTDRPGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WY+ Sbjct: 308 AIDAGKLARELQWRPAESFETGIVKTLDWYV 338 >gi|307265778|ref|ZP_07547329.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919173|gb|EFN49396.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter wiegelii Rt8.B1] Length = 350 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 232/333 (69%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS RY+++ K +++ +DKLTYAGNL +LK++ + ++F++ DICD Sbjct: 4 ILVTGGAGFIGSNFIRYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + + D +VNFAAESHVDRSI+ + F+ TN++GT LL + W Sbjct: 64 KELVEEIFSQ-DIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGDSF 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ + +FLQ+STDEVYGSL + G F+E P +P SPYS++KA++D +V A+ TY +PV Sbjct: 123 KEGK-KFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTYKMPVN 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDWLYVEDH +A+ LVL KG Sbjct: 182 ITRCSNNYGPYQFPEKLIPLMINNCLNKKPLPVYGDGLNVRDWLYVEDHCKAIDLVLHKG 241 Query: 241 RIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 RIGE YNIGGNNE+ NI+IV + ++ D + P LI ++ DR GHDRRYAID++ Sbjct: 242 RIGEIYNIGGNNEKTNIEIVKLIVAYIHDNVDPT--VDESLITYVADRKGHDRRYAIDAT 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK E+GW+P+ E G+ KT+ WYL N W + Sbjct: 300 KIKEELGWYPETKFEEGIKKTIEWYLKNREWLK 332 >gi|167038028|ref|YP_001665606.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116441|ref|YP_004186600.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856862|gb|ABY95270.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929532|gb|ADV80217.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 349 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 168/339 (49%), Positives = 234/339 (69%), Gaps = 15/339 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS +Y+++ K +++ +DKLTYAGNL +LK++ + ++F++ DI Sbjct: 1 MKILVTGGAGFIGSNFIKYMLSKYKGYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E + + D +VNFAAESHVDRSI+ + F+ TN++GT LL + W Sbjct: 61 CDKELVEEIFSQ-DIDYVVNFAAESHVDRSIIDPEIFVKTNVLGTVTLLNAAKKAW---- 115 Query: 120 QDKKDQFR----FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D+ D F+ FLQ+STDEVYGSL + G F+E P +P SPYS++KA++D +V A+ T Sbjct: 116 -DEGDSFKEGKKFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDT 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV ++ CSNNYGPY FPEKLIPL + + + +YGDG NVRDWLYVEDH +A+ Sbjct: 175 YKMPVNITRCSNNYGPYQFPEKLIPLMVNNCLNKKPLPVYGDGLNVRDWLYVEDHCKAID 234 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LVL KGRIG YNIGGNNE+ NI+IV + ++ D + P LI ++ DR GHDRR Sbjct: 235 LVLHKGRIGAVYNIGGNNEKTNIEIVKLIVSYIHDNVDPT--VDESLITYVADRKGHDRR 292 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAID++KIK E+GW+P+ E G+ KT+ WYL N W + Sbjct: 293 YAIDATKIKEELGWYPETKFEDGIKKTIEWYLQNREWLK 331 >gi|163789262|ref|ZP_02183704.1| dTDP-D-glucose 4,6-dehydratase [Flavobacteriales bacterium ALC-1] gi|159875477|gb|EDP69539.1| dTDP-D-glucose 4,6-dehydratase [Flavobacteriales bacterium ALC-1] Length = 350 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 164/328 (50%), Positives = 232/328 (70%), Gaps = 5/328 (1%) Query: 3 LIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + +L ++ + +V+ +DKLTYAG L++LKE + ++F++ DICD Sbjct: 17 ILITGGAGFIGSNFILHFLKHNKETEVVNLDKLTYAGELSNLKEQENNKNYTFIKGDICD 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS-- 119 E + +++ +++FAAESHVD SI D FITTN+ GTF LL + +W Sbjct: 77 SELVNELFNKYKFTGVIHFAAESHVDNSIKKPDAFITTNVNGTFNLLNTAKNYWMEAPFS 136 Query: 120 -QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + RF ISTDEVYGSL + GLF+E+ PY P+SPYSA+KASSD++V ++ HTYG+ Sbjct: 137 FKEGCENNRFHHISTDEVYGSLGETGLFTEETPYAPNSPYSASKASSDFIVRSYFHTYGM 196 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP I + + + +YGDG+N+RDWLYVEDH R + LV Sbjct: 197 SVVTTNCSNNYGPKQHNEKLIPTIIRKALNNEAIPIYGDGKNIRDWLYVEDHCRGINLVF 256 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG++GE YNIGG NER N+ I +I +LD L PK S+++ I F++DRPGHD RYAID Sbjct: 257 HKGKLGETYNIGGKNERDNLYIAQKICDILDELRPKDISYSKQITFVKDRPGHDFRYAID 316 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL 325 +SKI++ +GW+ EN E+G+ KT+ WYL Sbjct: 317 ASKIENNLGWYANENFETGIVKTIEWYL 344 >gi|284047953|ref|YP_003398292.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus fermentans DSM 20731] gi|283952174|gb|ADB46977.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus fermentans DSM 20731] Length = 339 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 173/340 (50%), Positives = 230/340 (67%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ + + +++ +DKLTYAGNL++L+ I F F+++DI Sbjct: 1 MNIIVTGGAGFIGSNFIFHMLKEYPEDRIICLDKLTYAGNLSTLEPIMDKPNFRFVKMDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ + +E PD +VNFAAESHVDRSIL + F+ TNIIGT +L++ R Sbjct: 61 CDRDAVYGLFEEEHPDIVVNFAAESHVDRSILNPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTETTPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YGDG NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIINALHDKPLPVYGDGLNVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 +L +GR+GE YN+GG+NE +NIDIV LI K E LI +++DR GHDRRY Sbjct: 232 ILHRGRVGEVYNVGGHNEMRNIDIV--------KLICKELGKPESLISYVKDRKGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYL+N WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIQWYLENQEWWEKI 323 >gi|91215490|ref|ZP_01252461.1| dTDP-glucose 4,6-dehydratase [Psychroflexus torquis ATCC 700755] gi|91186442|gb|EAS72814.1| dTDP-glucose 4,6-dehydratase [Psychroflexus torquis ATCC 700755] Length = 339 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 164/329 (49%), Positives = 230/329 (69%), Gaps = 6/329 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS V + + +DKLTYAG+LN++K +S + ++F++ DICD Sbjct: 4 ILVTGGAGFIGSNFLNLWVPEQTYHFVNLDKLTYAGDLNNIK-VSNYDNYTFIEGDICDT 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + KE++ + +++FAAESHVD SI D FI TNI GTF LL ++ + W + Sbjct: 63 SLLETLFKEYKFEKVIHFAAESHVDNSISNPDAFIRTNITGTFNLLHQSYVLWMESPFNF 122 Query: 123 KDQF---RFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +F RFL +STDEVYG+L D LF+ED Y P+SPYSA+KASSD + ++ HTYG+ Sbjct: 123 RKEFEKARFLHVSTDEVYGTLENDGSLFTEDTSYAPNSPYSASKASSDMIARSYFHTYGL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+ +NCSNNYGP+ EKLIP I + I+ + +YGDG+N+RDWLYV+DH + + + L Sbjct: 183 PVVTTNCSNNYGPHQHDEKLIPTIIRKAIQKQPIPIYGDGKNIRDWLYVDDHCKGIDIAL 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG++GE YNIGG NER+NI I +I +LD L P++ H +LI ++ DRPGHD RYAID Sbjct: 243 HKGKLGETYNIGGKNERQNIYIATKISEILDELKPQNKPHKDLIEYVTDRPGHDFRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + KI+S++GW E ESG+ KTV WYL+ Sbjct: 303 AGKIESKLGWCADETFESGIKKTVQWYLE 331 >gi|170288108|ref|YP_001738346.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|33413324|emb|CAD67949.1| putative dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|170175611|gb|ACB08663.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] Length = 342 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 173/336 (51%), Positives = 229/336 (68%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ +++ IDKLTYAGNL +L+ + F F++ DI Sbjct: 1 MTILVTGGAGFIGSNFIHYMMEKYPDYKIVCIDKLTYAGNLRNLETVLDKKNFRFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E +PD ++NFAAESHVDRSI D F+ TNI+GT +LL+ +R Sbjct: 61 CDRELVYRIFEEEKPDVVINFAAESHVDRSIESPDIFLKTNILGTQVLLDASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + RF Q+STDEVYG L D+ F+E P PSSPYSA+KAS+D LVLA+ TY Sbjct: 114 --KYNVKRFHQVSTDEVYGDLPLDRSDLKFTESSPLRPSSPYSASKASADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I + + +YGDG+NVRDW++V+DH A+ + Sbjct: 172 GVPVTISRCSNNYGPYQFPEKLIPLMIINALNDRPLPVYGDGRNVRDWIHVKDHCEAIDI 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +G+ GE YNIGG NER NID+V I L + P+S LIRF++DRPGHDRRYA Sbjct: 232 IIHRGKEGEIYNIGGENERANIDVVRMI--LRELGKPES-----LIRFVKDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D S++K E GW P+ + E GL T+ WYL+N WW Sbjct: 285 LDISRMKKEFGWSPKISFEEGLKSTIKWYLENRSWW 320 >gi|300853755|ref|YP_003778739.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] gi|300433870|gb|ADK13637.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 168/330 (50%), Positives = 231/330 (70%), Gaps = 6/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ L I+++ DKLTYAGNL +LK IS++ + F+Q DICDR Sbjct: 5 LVTGGAGFIGSNFIHYMLKKYLNIKIINYDKLTYAGNLENLKFISKNPNYIFVQGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ +++ D ++NFAAESHVDRSI + F+ TN++GT LL+ + W+ + K Sbjct: 65 EKLQQLFEKYDIDYVINFAAESHVDRSIRDPEVFVKTNVLGTVALLDTAKNAWTLEGEFK 124 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ++LQ+STDEVYGSL K G F+E P + SPYS++KAS+D +V A+ TY +PV + Sbjct: 125 QGK-KYLQVSTDEVYGSLGKEGYFTEKTPLDSHSPYSSSKASADLMVKAYFDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I + +YGDG N+RDWLYVEDH +A+ +V+ G+ Sbjct: 184 TRCSNNYGPYQFPEKLIPLVINNCANKRDIPVYGDGLNIRDWLYVEDHCKAIDMVINNGK 243 Query: 242 IGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YNIGG+NER NI IV I ++ D + P Y LI+++EDR GHDRRY ID +K Sbjct: 244 LGEAYNIGGHNERTNIYIVKTIISYIHDNVDP--YVDENLIKYVEDRKGHDRRYGIDPTK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK E+GW+P+ E G+ KT+ WYLDN W Sbjct: 302 IKDELGWYPETEFEDGIIKTIKWYLDNKDW 331 >gi|58039515|ref|YP_191479.1| dTDP-glucose 4,6-dehydratase [Gluconobacter oxydans 621H] gi|58001929|gb|AAW60823.1| dTDP-glucose 4,6-dehydratase [Gluconobacter oxydans 621H] Length = 351 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 224/334 (67%), Gaps = 3/334 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGG GFIGSA+ R+L+ + + VL +D +TYA + +++ E++ +S + +I Sbjct: 1 MRILLTGGCGFIGSAVVRHLIRNTEHSVLNVDCMTYAASEDTVSEVADDPRYSHARANIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ +E++PDA+++ AAESHVDRSI G FI TN++GT+ LLE R +W+ L Sbjct: 61 NGVEMQRLFEEYRPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSLLEAARKYWNTLGD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEV+G L+ F+E PY+P SPYSA+KASSD+LV AW HTYG+P Sbjct: 121 AEKKAFRFHHISTDEVFGHLEPNDPPFTETTPYDPRSPYSASKASSDHLVRAWFHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYG +HFPEKLIPL IEG + +YG G+NVRDWL+VEDH AL ++ Sbjct: 181 TFVTNTTNNYGIWHFPEKLIPLVTINAIEGRELPVYGKGENVRDWLFVEDHAEALVKAVE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 G+ GE Y IG R N+++V +I +LD L P E LIRF+ DRPGHD RY ID Sbjct: 241 IGKPGETYAIGARQPRTNLEVVKKICAVLDELQPDPAGPRERLIRFVTDRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S + E+ W + + E G+ KTV WYLDN WW Sbjct: 301 PSHAEKELDWKAEHDFERGIRKTVQWYLDNRAWW 334 >gi|254281596|ref|ZP_04956564.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium NOR51-B] gi|219677799|gb|EED34148.1| dTDP-glucose 4,6-dehydratase [gamma proteobacterium NOR51-B] Length = 350 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 175/349 (50%), Positives = 224/349 (64%), Gaps = 21/349 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ Y L+ D LTYAGN NSL E+ + F+Q DICD Sbjct: 1 MVTGAAGFIGANFVHYWAEKYPGDTLIAYDALTYAGNRNSLTELEDAGKLVFVQGDICDP 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +C+ L++ D +V+FAAESHVDRSI G D FI TN++GT LL R +W LS Sbjct: 61 DCVSQTLRDHSVDTLVHFAAESHVDRSITGPDAFIRTNLVGTHTLLAAAREFW--LSGSG 118 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF +STDEV+GSL + F ED+ Y P+SPYSA+KA SD+LV A+ HTYG+ V Sbjct: 119 LPH-RFHHVSTDEVFGSLTAEAPAFREDLRYEPNSPYSASKAGSDHLVRAYHHTYGLEVT 177 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNCSNNYGPYHFPEKLIPL +T +++G + +YGDG N+RDWLYV DH R + VL G Sbjct: 178 TSNCSNNYGPYHFPEKLIPLCLTNILDGKPLPVYGDGSNIRDWLYVVDHARGVDAVLSSG 237 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDAL------IPKSYSHT---------ELIRFIE 285 +GE YNIGG NE +NIDIV + +D L + + + H+ LI F+E Sbjct: 238 EVGETYNIGGINEWRNIDIVELLCEQMDQLFSERPELARRFPHSPCSRGESAASLITFVE 297 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 DR GHD RYAID+ KI E+G+ P+E +GL KT+ WY++N WWRPL Sbjct: 298 DRAGHDWRYAIDAGKIGRELGFVPEETFATGLKKTLHWYVENEPWWRPL 346 >gi|229106720|ref|ZP_04236951.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-28] gi|228676718|gb|EEL31333.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-28] Length = 339 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 168/334 (50%), Positives = 233/334 (69%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS RY+V + ++ +D LTYAGNL +LK+I + + + F++ DI Sbjct: 1 MKVLVTGGAGFIGSNFVRYMVKKYPEYNIVNLDALTYAGNLENLKDIEELSNYKFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I KE D ++NFAAESHVDRSI D FI TNI GT +LL+ + Sbjct: 61 ADRQFINQLFKEENFDYVLNFAAESHVDRSITNPDIFIQTNIQGTQVLLDAAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++LQ+STDEVYG+L + G F+E+ P +SPYS++KA +D LV A+ T+G+P Sbjct: 114 --NAEVKKYLQVSTDEVYGTLGETGYFTEETPLASNSPYSSSKAGADLLVRAYHETFGLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL I + + +YGDG NVRDWL+VEDH +A+ LVL Sbjct: 172 VNITRCSNNYGPFHFPEKLIPLMIINALNDKQLPVYGDGLNVRDWLHVEDHCQAIDLVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YN+GGNNER NI+IV I LD P+S LI+++ DRPGHDRRYAID+ Sbjct: 232 KGKNGEVYNVGGNNERTNIEIVKTILKALDK--PES-----LIKYVTDRPGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +K++ E+GW P+ N ++G+ +T+ WYL+N WW+ Sbjct: 285 TKLREELGWSPKYNFDTGIEQTIKWYLENQDWWK 318 >gi|295400932|ref|ZP_06810907.1| dTDP-glucose 4,6-dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|294976934|gb|EFG52537.1| dTDP-glucose 4,6-dehydratase [Geobacillus thermoglucosidasius C56-YS93] Length = 340 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 179/343 (52%), Positives = 231/343 (67%), Gaps = 23/343 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS RY+V Q++ +D LTYAGNL ++KE+ + F++ DI Sbjct: 1 MKVLITGGAGFIGSNFVRYMVRKYPSYQIINLDALTYAGNLENVKEVENEPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I S E DA+VNFAAESHVDRSI+ F+ TN+ GT +LL+ + Sbjct: 61 TDRELIESLFAE-GIDAVVNFAAESHVDRSIVDPGIFVKTNVQGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +++QISTDEVYG+L + G F+E P P+SPYSA+KA +D LV A+ TYG+P Sbjct: 113 --KYGVKKYIQISTDEVYGTLGETGYFTETTPLAPNSPYSASKACADLLVRAYHETYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL I + + +YGDG NVRDWL+VEDH A+ LVL Sbjct: 171 VNITRCSNNYGPYHFPEKLIPLMIINALNDQPLPVYGDGLNVRDWLHVEDHCSAIDLVLH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE YNIGGNNER NI++V I L+ P+S LI F+EDR GHDRRYAID+ Sbjct: 231 KGRNGEVYNIGGNNERTNIEVVKAILRYLNK--PES-----LITFVEDRLGHDRRYAIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKE 337 +KI+ E+GW P+ E GL KT+ WYL+N WW + YKE Sbjct: 284 TKIRKELGWKPKYTFEEGLKKTIDWYLENRSWWEKILSGEYKE 326 >gi|254478555|ref|ZP_05091929.1| dTDP-glucose 4,6-dehydratase [Carboxydibrachium pacificum DSM 12653] gi|214035484|gb|EEB76184.1| dTDP-glucose 4,6-dehydratase [Carboxydibrachium pacificum DSM 12653] Length = 350 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 167/333 (50%), Positives = 232/333 (69%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS RY+++ K +++ +DKLTYAGNL +LK++ + ++F++ DICD Sbjct: 4 ILVTGGAGFIGSNFIRYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + + D +VNFAAESHVDRSI+ + F+ TN++GT LL + W Sbjct: 64 KELVEEIFSQ-DIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGDSF 122 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ + +FLQ+STDEVYGSL + G F+E P +P SPYS++KA++D +V A+ TY +PV Sbjct: 123 KEGK-KFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTYKMPVN 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDWLYVEDH +A+ LVL KG Sbjct: 182 ITRCSNNYGPYQFPEKLIPLMINNCLNKKPLPVYGDGLNVRDWLYVEDHCKAIDLVLHKG 241 Query: 241 RIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 R+GE YNIGGNNE+ NI+IV + ++ D + P LI ++ DR GHDRRYAID++ Sbjct: 242 RVGEIYNIGGNNEKTNIEIVKLIVSYIHDNVDPT--VDESLITYVADRKGHDRRYAIDAT 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK E+GW+P+ E G+ KT+ WYL N W + Sbjct: 300 KIKEELGWYPETKFEDGIKKTIEWYLQNREWLK 332 >gi|326792854|ref|YP_004310675.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] gi|326543618|gb|ADZ85477.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] Length = 348 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 230/335 (68%), Gaps = 15/335 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +Y++ ++ +D LTYAGNL +L E+ ++ ++F++ DI DR Sbjct: 4 ILVTGGAGFIGSNFVKYMLETYDYNIINLDVLTYAGNLENLIEVQENPRYTFVRGDIRDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S E + D +VNFAAESHVDRSI + F+TTNI+GT +LL+ + +W +DK Sbjct: 64 ELVDSLFTEHEIDTVVNFAAESHVDRSIEDPEIFLTTNILGTQVLLDTAKKYWKVNIEDK 123 Query: 123 -----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ ++LQ+STDEVYG+L K G+F+E P P+SPYSA+KAS+D +V A+ T+G Sbjct: 124 YCKSFKEGVKYLQVSTDEVYGTLGKEGMFTETTPLAPNSPYSASKASADMIVRAYHETFG 183 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWL+V+DH + V Sbjct: 184 MPVNITRCSNNYGPYQFPEKLIPLMINNCLNDRQLPVYGDGMQIRDWLHVKDHCTGIDTV 243 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYA 295 L KG GE YNIGGNNE+ NI IV LI K+ +E LI++++DRPGHDRRYA Sbjct: 244 LHKGETGEVYNIGGNNEKANIQIV--------KLIIKTLGKSEQLIKYVQDRPGHDRRYA 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SKI +E+GW P E G+ +T+ WYL ++ W Sbjct: 296 IDNSKIATELGWAPSYTFEVGMEETIQWYLKHDEW 330 >gi|122934726|gb|ABM68331.1| RmlB [Geobacillus tepidamans] Length = 339 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 178/333 (53%), Positives = 227/333 (68%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS Y+V Q++ +D LTYAGNL ++KE+ + F++ DI Sbjct: 1 MKVLITGGAGFIGSNFVNYMVRKYPSYQIINLDALTYAGNLENVKEVENEPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I S E DA+VNFAAESHVDRSI F+ TNI GT +LL+ + Sbjct: 61 TDRELIESLFAE-GIDAVVNFAAESHVDRSITDPGVFVRTNIQGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +++QISTDEVYG+L + G F+E P P+SPYSA+KAS+D+LV A+ TYG+P Sbjct: 113 --KYGVKKYIQISTDEVYGTLGETGYFTETTPLAPNSPYSASKASADFLVRAYHETYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL I + + +YGDG NVRDWL+VEDH A+ LVL Sbjct: 171 VNITRCSNNYGPYHFPEKLIPLMIINALNDQPLPVYGDGLNVRDWLHVEDHCSAIDLVLH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE YNIGGNNER NID+V I L+ P+S LI F+EDR GHDRRYAID+ Sbjct: 231 KGRNGEVYNIGGNNERTNIDLVKAILRYLNK--PES-----LIIFVEDRLGHDRRYAIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +KI+ E+GW P+ E GL KT+ WYL+N WW Sbjct: 284 TKIRKELGWKPKYAFEEGLKKTIDWYLENRSWW 316 >gi|88808164|ref|ZP_01123675.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7805] gi|88788203|gb|EAR19359.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7805] Length = 355 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 221/336 (65%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGGAGFIG A+ R L+ + V +DK+ YA +L S++E+ Sbjct: 17 RVLVTGGAGFIGGAVVRRLLRESDAIVFNLDKMGYASDLTSIEEVLGELGDGADQRHVLQ 76 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 QVD+ D +R A++ PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R + Sbjct: 77 QVDLADATAVREAVQAADPDLVMHLAAESHVDRSITGPGVFIESNVTGTYNLLQAVREHY 136 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L+ ++K+ FR ISTDEV+GSL +G FSE PY+P SPYS++KA+SD+LV AW HT Sbjct: 137 DTLNGERKEHFRLHHISTDEVFGSLGAEGRFSETTPYDPRSPYSSSKAASDHLVSAWHHT 196 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV+L+NCSNNYGP+ FPEKLIP+ + G + LYGDG NVRDWLYVEDHV AL Sbjct: 197 YALPVVLTNCSNNYGPWQFPEKLIPVVTLKAAAGERIPLYGDGLNVRDWLYVEDHVDALL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L +G G Y +GG ER N ++V I +D L P H++LI + DRPGHDRRY Sbjct: 257 LAACRGESGRSYCVGGYGERNNREVVECICSHMDQLKPDRAPHSQLITRVTDRPGHDRRY 316 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID ++I++E+GW P+ + + + TV WYLD+ W Sbjct: 317 AIDPTRIETELGWKPRHDFSTAIETTVQWYLDHLQW 352 >gi|303241686|ref|ZP_07328184.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] gi|302590801|gb|EFL60551.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] Length = 364 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 167/330 (50%), Positives = 228/330 (69%), Gaps = 4/330 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y+++ K ++ +DKLTYAGNL +LKE+ + ++F++ DICD Sbjct: 14 LLVTGGAGFIGSNFITYMLSRYNKYHIVNLDKLTYAGNLENLKELENKSNYTFVKGDICD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + +++ D +VNFAAESHVDRSIL + F TNIIGT LL + W + Sbjct: 74 KELVNLLFNKYEIDYVVNFAAESHVDRSILNPEIFADTNIIGTLNLLNAAKKSWEG-KEG 132 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ +F+QISTDEVYGSL D G F+E +P SPYSA+KAS+D LV ++ TY +P+ Sbjct: 133 FRESCKFIQISTDEVYGSLGDTGFFTELTSLDPHSPYSASKASADLLVKSYYDTYRMPIN 192 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL + + + +YG+G N+RDWLYVEDH A+ LVL G Sbjct: 193 ITRCSNNYGPYQFPEKLIPLMVNNALNKKKLPVYGNGSNIRDWLYVEDHCSAIDLVLHNG 252 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 RIGE YNIGGNNER+NI IV + +++ + S EL+ ++EDR GHD+RY ID+SK Sbjct: 253 RIGEVYNIGGNNERQNIQIVKTVINFINSNVDNSIDE-ELVTYVEDRKGHDKRYGIDASK 311 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK ++GW P+ E G+ KT+ WYL+N W Sbjct: 312 IKKDLGWEPKTTFEEGIKKTINWYLENKEW 341 >gi|23013800|ref|ZP_00053657.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magnetotacticum MS-1] Length = 353 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 160/334 (47%), Positives = 224/334 (67%), Gaps = 2/334 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+L+ + V+ +D+L+YA + +L E+ +S F+ DI DR Sbjct: 7 VLVTGGAGFIGSAVVRHLIGETGWSVVNLDRLSYAASPAALFEVKESPRHRFVHGDIRDR 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S L E +P A+++ AAE+HVDRSI G + F+ N++G+F LLE R +WS LS + Sbjct: 67 DLVSSLLAEHRPCAVLHLAAETHVDRSIDGPEAFMEHNLMGSFHLLEAVRAYWSKLSGAE 126 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 QFR++Q+STDEV+GSL D F+ D Y P SPYSA+KA D+L AW HT+G+PV+ Sbjct: 127 AAQFRYVQVSTDEVFGSLGPDDAAFNLDTQYQPRSPYSASKAGGDHLARAWAHTWGLPVM 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NC+NNYGPY FPEKLIPL I R + G + +YG G N RDWL+VEDH R L L L++G Sbjct: 187 VTNCTNNYGPYQFPEKLIPLMILRGLRGEPLPVYGTGANRRDWLHVEDHARGLCLALERG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + G Y GG E N+++V I +LD L P +LI+ + DRPGHD RYA+D+S Sbjct: 247 QPGGTYLFGGGTECSNLEVVDAICRILDRLKPADRPRRDLIQMVADRPGHDFRYAMDASS 306 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +GW P + G+ +TV WYLD+ WW P+ Sbjct: 307 TLDGLGWSPAIGFDEGIARTVQWYLDHCDWWEPI 340 >gi|171316142|ref|ZP_02905367.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MEX-5] gi|171098746|gb|EDT43540.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria MEX-5] Length = 334 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 168/327 (51%), Positives = 218/327 (66%), Gaps = 4/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ YL+ D +++++ +D LTYAG+L+ L + F+ DICD Sbjct: 8 VLVTGGAGFIGANFVHYLLATDPQVRIINLDLLTYAGSLDHLAGADDTGRHRFVLGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQ 120 R + S L++ D IV+FAAESHVDRSI G EF+ +N++GT+ LL+ R +W + Sbjct: 68 RPLVESLLRDHAIDTIVHFAAESHVDRSITGPGEFVRSNVVGTWTLLDAARTVWMTGRDA 127 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D Q RF I TDEVYGSL D FSE PY P+SPYSA+KA SD+LV A+ HTYG+P Sbjct: 128 DAHAQRRFHHIGTDEVYGSLAPDDPPFSETTPYAPNSPYSASKAGSDHLVRAYFHTYGLP 187 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V +NCSNNYGP EK IP I + G+ + LYGDG NVRDWLYV+DH RA+ V++ Sbjct: 188 VTTTNCSNNYGPRQHAEKFIPTVIRSCVNGAPIPLYGDGANVRDWLYVDDHCRAIDAVIR 247 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G IGE YN+GG NE +N DIV I LLD P+ H L F+ DRPGHDRRYAID+ Sbjct: 248 HGTIGETYNVGGCNEWRNADIVDLICSLLDVRRPQGAPHARLKHFVADRPGHDRRYAIDA 307 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 K++ E+ W P E E+G+ KT+ WYL Sbjct: 308 GKLERELRWKPAETFETGILKTLDWYL 334 >gi|163859121|ref|YP_001633419.1| dTDP-glucose 4,6-dehydratase [Bordetella petrii DSM 12804] gi|163262849|emb|CAP45152.1| dTDP-glucose 4,6-dehydratase [Bordetella petrii] Length = 353 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 162/334 (48%), Positives = 217/334 (64%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAG+ +L + + DI Sbjct: 1 MSILVTGGAGFIGSNFVLAWLGGSDEPVINLDKLTYAGHAGNLDSLQGDARHQLVHGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L+ QP A++NFAAESHVDR+I G D FI TN+ GTF LLE R +W L + Sbjct: 61 DNALVAALLQAHQPRAVLNFAAESHVDRAIRGPDAFIHTNVTGTFQLLEAVRAYWQALGE 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FR+LQ+STDEVYGSL F+E PY P++PYSA+KA+ D+LV A+ HTYG+P Sbjct: 121 PARTGFRYLQVSTDEVYGSLGPQDPPFAEGDPYRPNNPYSASKAAGDHLVRAYWHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL ++C NNYGP FPEKLIPL I + G + LYGDG +VRDWL+V+DH L VL+ Sbjct: 181 VLTTHCPNNYGPRQFPEKLIPLLIHHALAGRPLPLYGDGSHVRDWLHVDDHCAGLRRVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 G G+ Y++G ER N+ + + LLDA P++ +H E I F++DRPGHDRRYAI Sbjct: 241 AGEPGQVYHVGAGQERSNLQVAQAVCALLDAWRPRADGRAHGEQITFVQDRPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ ++GW P ++GL TV WYLD+ W Sbjct: 301 DAGKIRRQLGWQPAHAFDAGLRATVQWYLDHPEW 334 >gi|282892105|ref|ZP_06300580.1| hypothetical protein pah_c207o034 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498000|gb|EFB40344.1| hypothetical protein pah_c207o034 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 352 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 163/332 (49%), Positives = 232/332 (69%), Gaps = 4/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + ++ K ++ +DKLTYAGNL++L I ++ L+ F+Q DI DR Sbjct: 2 ILVTGGAGFIGSNFIKNWLHYEKDPIINLDKLTYAGNLHNLSGICENPLYHFVQGDIQDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R L ++ P +I++FAAESHVDRSI + FI TNI+GT+ LLEE +W+ LS ++ Sbjct: 62 ALVREILHKYHPHSIIHFAAESHVDRSIHAPEAFIQTNILGTYCLLEEALAYWNELSDER 121 Query: 123 KDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFLQISTDEV+GSL +E PY P++PYSA+KAS+D+LV A+GHTY +P+L Sbjct: 122 KKHFRFLQISTDEVFGSLTSFAPASTEVSPYRPNNPYSASKASADHLVEAFGHTYHLPIL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +NN+GP+ FPEK IP I + I+G+ + +YGDG VR+W+YV DH A+ VL+KG Sbjct: 182 ITRSANNFGPFQFPEKFIPHLILQAIQGNTIPIYGDGLQVRNWIYVHDHCNAIRQVLEKG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDS 298 +GE YNI G E N+++ I +LD L P S H+ LI ++DRPGHDRRY+++ Sbjct: 242 TVGESYNIAGIKETTNLELAEMICGILDELKPDSPVLPHSSLIVHVKDRPGHDRRYSLNG 301 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI E+GW P+ + E L +TV WYL ++ W Sbjct: 302 TKIWKELGWMPEASFEQQLRETVQWYLSHSHW 333 >gi|254481035|ref|ZP_05094281.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] gi|214038830|gb|EEB79491.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] Length = 353 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 226/350 (64%), Gaps = 20/350 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIG+ Y + +++ D LTYAGN +L + ++ FSF+ DICD Sbjct: 5 ILVTGAAGFIGANFVHYWRSQYPDDRIVAFDALTYAGNRANLASLEGTDGFSFVHADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + L+E D +V+FAAESHVDRSI G D FI TN++GT LL+ R W L D Sbjct: 65 YDTVLATLREHSVDTLVHFAAESHVDRSITGPDAFIETNVVGTHSLLKAAREHW--LGGD 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF +STDEVYGSL D F E+ Y P+SPYSA+KA+SD+LV A+ HTYG+ V Sbjct: 123 SPRPHRFHHVSTDEVYGSLTPDAPGFYEEQKYEPNSPYSASKAASDHLVRAYLHTYGLQV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SNCSNNYGPYHFPEKL+PL +T ++ G + +YGDG N+RDWLYV DH R + VL Sbjct: 183 TTSNCSNNYGPYHFPEKLVPLCLTNILRGLPLPVYGDGSNIRDWLYVADHCRGIEKVLLD 242 Query: 240 GRIGERYNIGGNNERKNIDIV------FEIGFLLDALIPKSY---------SHTELIRFI 284 G +GE YNIGGNNE N+DIV + F D + + + S +LI F+ Sbjct: 243 GVVGETYNIGGNNEWNNLDIVHLLCEQMDARFAADTSLAQRFPDSPCASGGSARDLITFV 302 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 EDR GHD RYAID++KI +E+G+ P E E+GL KT+ WYL N WWRPL Sbjct: 303 EDRAGHDWRYAIDATKISNELGYQPAETFETGLGKTLDWYLANEDWWRPL 352 >gi|170734750|ref|YP_001773864.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia MC0-3] gi|169820788|gb|ACA95369.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia MC0-3] Length = 338 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 225/331 (67%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L+ +D ++ V +D LTYAG+L++L ++ ++ F+ DIC Sbjct: 8 VLVTGGAGFIGANFVRHLLESDPQVSVTTLDLLTYAGSLDNLGDDLPGADRHRFVLGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR + S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 68 DRPLVESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRQIWLNDQK 127 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D + RF I TDEVYGSL D FSE PY P+SPYSATKASSD+LV A+ HT Sbjct: 128 LGRADAHARRRFHHIGTDEVYGSLGPDDPPFSETTPYAPNSPYSATKASSDHLVRAYFHT 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I +EG+ + +YGDG NVRDWLYV+DH RA+ Sbjct: 188 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVEGTDIPVYGDGANVRDWLYVDDHCRAID 247 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G IGE Y +GG NE +N+DIV I LLDA P+ H L+RF+ DR GHDRRY Sbjct: 248 AVIRRGAIGETYTVGGCNEWRNVDIVALICTLLDARRPEHAPHARLVRFVTDRAGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WYL Sbjct: 308 AIDAGKLARELQWRPAESFETGIVKTLDWYL 338 >gi|262275862|ref|ZP_06053671.1| dTDP-glucose 4,6-dehydratase [Grimontia hollisae CIP 101886] gi|262219670|gb|EEY70986.1| dTDP-glucose 4,6-dehydratase [Grimontia hollisae CIP 101886] Length = 373 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 177/366 (48%), Positives = 232/366 (63%), Gaps = 34/366 (9%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG+ Y L + + +V+V+D LTYAGN +L ++ + F+ +ICD Sbjct: 6 LLVTGGAGFIGANFVHYWLKHHVNDKVVVLDALTYAGNKANLDIVANNENMVFVHGNICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + LKE++ D IV+FA ESHVDRSI D FI TNIIGT+ LL+ + W Sbjct: 66 TNLVETLLKEYKLDTIVHFAGESHVDRSISAPDAFIETNIIGTYSLLKAAKKVWIDEPTA 125 Query: 122 KKDQF---RFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF +STDEVYG+L + F+E PY P+SPYSA+KA++D+LV A+ HTYG Sbjct: 126 RGEAVIPHRFHHVSTDEVYGTLKPNDPAFTETTPYAPNSPYSASKAAADHLVRAYHHTYG 185 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V SNCSNNYGPYHFPEKLIPL IT ++ + +YGDGQ +RDWLYVEDH R + LV Sbjct: 186 MDVTTSNCSNNYGPYHFPEKLIPLIITNILYNKPLPIYGDGQQIRDWLYVEDHARGIELV 245 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 LKKG +GE YNIGGN E NIDIV I L++ ++S E Sbjct: 246 LKKGHVGENYNIGGNIEWTNIDIVHVICQLMNEYFTGAHSFLESSSLNLSASDLQMKYPH 305 Query: 280 -----------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 LI F+EDR GHDRRYAID++K +E+G+ P E+ E+G+ KTV WYL N Sbjct: 306 AITASKGQCETLITFVEDRAGHDRRYAIDATKTNNELGYKPIESFETGIRKTVEWYLGNK 365 Query: 329 WWWRPL 334 WW+ L Sbjct: 366 KWWKYL 371 >gi|148265299|ref|YP_001232005.1| dTDP-glucose 4,6-dehydratase [Geobacter uraniireducens Rf4] gi|146398799|gb|ABQ27432.1| dTDP-glucose 4,6-dehydratase [Geobacter uraniireducens Rf4] Length = 357 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 229/331 (69%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS ++ + +++ +D LTYAGNL +LK + + + F++ DICD Sbjct: 10 ILVTGGAGFIGSNFINSFMAGNPGCRLVNLDVLTYAGNLENLKGVENNPSYRFVKGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + DA+V+FAAESHVDRSI G + F+ TN++G+ +LLEE+R W Sbjct: 70 SALVARLLAEERIDAVVHFAAESHVDRSITGPEIFVRTNVLGSQVLLEESRKHWQARVVP 129 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +FRFLQ+STDEVYGSL D G F+E+ P P+SPYSA+KA +D LV A+ TYG P L Sbjct: 130 ---EFRFLQVSTDEVYGSLGDTGFFTEETPLAPNSPYSASKAGADLLVRAYHETYGFPTL 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGPYHFPEKLIPL I ++ + +YGDG NVRDWL+V+DH A+ VLK G Sbjct: 187 NTRCSNNYGPYHFPEKLIPLMIHNIMNKKPLPVYGDGLNVRDWLHVKDHSIAIETVLKTG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 +G+ YNIGGNNE +NIDIV + LLDA + +S +LI F++DRPGHDRRYAID+S Sbjct: 247 GLGQVYNIGGNNEWRNIDIVNLVCDLLDAKLGRSSGENRQLITFVKDRPGHDRRYAIDAS 306 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +++ E+ W P E G+ +T+ WYL N W Sbjct: 307 RMRRELSWEPSYTFERGIAETIDWYLANQEW 337 >gi|86135155|ref|ZP_01053737.1| dTDP-glucose 4,6-dehydratase [Polaribacter sp. MED152] gi|85822018|gb|EAQ43165.1| dTDP-glucose 4,6-dehydratase [Polaribacter sp. MED152] Length = 335 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 167/328 (50%), Positives = 226/328 (68%), Gaps = 5/328 (1%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFIGS Y L N+ ++V+ +D LTYAGNL +LKEI + + F++ DICD Sbjct: 4 LLITGGAGFIGSNFIPYFLENNKDVKVVNLDLLTYAGNLENLKEIEDHDNYDFVEGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + S + D +++FAAESHVD SI D F+ TN+ GTF +++ + +W Sbjct: 64 RKLVESLFNKHNFDGVIHFAAESHVDNSIENPDAFVRTNVFGTFNIIDVAKNFWMHSPFQ 123 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F RF ISTDEVYG+L D GLF+E PY+P+SPYSA+KASSD+LV ++ HTYG+ Sbjct: 124 FNEGFENSRFHHISTDEVYGTLGDSGLFTEKTPYSPNSPYSASKASSDFLVRSYFHTYGM 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP I + + + +YGDG+N+RDWLYV DH R + LV Sbjct: 184 NVITTNCSNNYGPKQHNEKLIPTIIRKALSNDKIPIYGDGKNIRDWLYVLDHCRGIDLVY 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K G+ G+ YNIGG NER N+ I +I +LD + PK+ S+ I F++DRPGHD RYAID Sbjct: 244 KNGKFGDTYNIGGRNERDNLYIANKICEILDEVQPKNESYKNQISFVKDRPGHDFRYAID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL 325 + KI+ E+GW QEN ESG+ KT+ WYL Sbjct: 304 ADKIERELGWKAQENFESGIKKTIEWYL 331 >gi|308071020|ref|YP_003872625.1| dTDP-glucose 4,6-dehydratase [Paenibacillus polymyxa E681] gi|305860299|gb|ADM72087.1| dTDP-glucose 4,6-dehydratase [Paenibacillus polymyxa E681] Length = 339 Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 167/333 (50%), Positives = 231/333 (69%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ + +++ ID LTYAGNL +LK I +F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFVLYMLKHHPDYEIVNIDALTYAGNLENLKSIENHPKHTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + I +++ D +VNFAAESHVDRSIL + F+ TN++GT +LL+ + Sbjct: 61 TDAQAIEQLMQQ-GIDVVVNFAAESHVDRSILEPEVFVKTNVLGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +F+Q+STDEVYGSL + GLF+E+ P P+SPYSA+KA SD LV A+ T+G+P Sbjct: 113 --KYNVTKFVQVSTDEVYGSLGETGLFTEETPLQPNSPYSASKAGSDLLVRAYHETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I+R + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLMISRALSDQQLPVYGDGLNIRDWLYVEDHCSAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G++GE YNIGGNNER N+ IV + L + P+S LI +++DRPGHDRRY ID Sbjct: 231 QGKLGEVYNIGGNNERTNVHIVKTV--LEELGKPES-----LISYVQDRPGHDRRYGIDP 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K +E+GW P+ + E+G+ +T+ WYLDN WW Sbjct: 284 TKTMNELGWKPKHSFETGIKETIRWYLDNKEWW 316 >gi|46445760|ref|YP_007125.1| dTDP-glucose 4,6-dehydratase, rfbB [Candidatus Protochlamydia amoebophila UWE25] gi|46399401|emb|CAF22850.1| probable dTDP-glucose 4,6-dehydratase, rfbB [Candidatus Protochlamydia amoebophila UWE25] Length = 352 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 179/354 (50%), Positives = 226/354 (63%), Gaps = 19/354 (5%) Query: 3 LIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGSA RYL+ + K + D LTYAGNL +L +S + F Q +I Sbjct: 9 ILVTGGAGFIGSAFIRYLLAPETEFKGTCINFDALTYAGNLENLASLSSDPRYIFEQGNI 68 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C+ I +E D I++FAAESHVDRSILG FI TNI+GTF LLE R Sbjct: 69 CNEAFIEHVCQEHAIDTIIHFAAESHVDRSILGPKVFIETNILGTFSLLEVVR------- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K F +STDEVYG+L +G F+E+ Y P+SPYSA+KASSD+LV A+ HTY + Sbjct: 122 --KNPHIHFHHVSTDEVYGTLGAEGYFTEETAYRPNSPYSASKASSDHLVRAYHHTYHLS 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPYHFPEKLIP+ I ++ + +YG G NVRDWLYVEDH +ALYL+L+ Sbjct: 180 TCISNCSNNYGPYHFPEKLIPVMILNCLDRKPLPVYGQGVNVRDWLYVEDHAKALYLLLQ 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E +NID++ EI + S E LI +++DRPGHD RYAID Sbjct: 240 KGRSGETYNIGGEAEWRNIDLIHEIIRQIAITQQIEVSELEKLITYVKDRPGHDLRYAID 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 SKIK+E GW P E GL+KT+ WY+ N W + + Y +W LN Sbjct: 300 CSKIKNEFGWSPSLRFEEGLHKTIQWYIQNEQWVKNI-----QTGSYRRWIELN 348 >gi|315649765|ref|ZP_07902848.1| dTDP-glucose 4,6-dehydratase [Paenibacillus vortex V453] gi|315274739|gb|EFU38120.1| dTDP-glucose 4,6-dehydratase [Paenibacillus vortex V453] Length = 340 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 228/333 (68%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ Q++ +D LTYAGNL +LK + +SF+Q DI Sbjct: 1 MKLLVTGGAGFIGSNFILYMIQQYPDYQIINMDALTYAGNLENLKSVQHHPNYSFVQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + ++ D +VNFAAESHVDRSIL + F+ TN++GT +LL+ + + Sbjct: 61 ADKPAVDAIFQQ-GIDVVVNFAAESHVDRSILEPEIFVNTNVMGTQVLLDAAKKYGVT-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+Q+STDEVYGSL D GLFSE P P+SPYSA+KA D L+ A+ T+G+P Sbjct: 118 -------KFVQVSTDEVYGSLGDTGLFSETTPLAPNSPYSASKAGGDLLIRAYHETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I+R + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLIISRALNDESLPVYGDGLNIRDWLYVEDHCSAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+IGE YNIGGNNER N+ IV I L + P+S LI ++ DRPGHDRRY ID Sbjct: 231 QGKIGEVYNIGGNNERTNLHIVKTI--LEELGKPES-----LITYVADRPGHDRRYGIDP 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +KI +E+GW P+ N E+G+ +T+ WYL++ WW Sbjct: 284 TKIMNELGWKPKHNFETGIKETIQWYLNHKDWW 316 >gi|154483768|ref|ZP_02026216.1| hypothetical protein EUBVEN_01472 [Eubacterium ventriosum ATCC 27560] gi|149735259|gb|EDM51145.1| hypothetical protein EUBVEN_01472 [Eubacterium ventriosum ATCC 27560] Length = 339 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 171/340 (50%), Positives = 227/340 (66%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +DKLTYAGNL++L+ + + F F ++DI Sbjct: 1 MNIIVTGGAGFIGSNFVFHMLNTYPDYRIICVDKLTYAGNLSTLEPVMDNPNFRFCKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ I +E PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 CDRDAIYGLFEEEHPDMVVNFAAESHVDRSIENPEVFLNTNILGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE KNIDIV +I K E LI ++ DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEMKNIDIV--------KIICKELGKPESLITYVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFVDGIKKTIKWYLDNKEWWETI 323 >gi|254446690|ref|ZP_05060165.1| dTDP-glucose 4,6-dehydratase [Verrucomicrobiae bacterium DG1235] gi|198256115|gb|EDY80424.1| dTDP-glucose 4,6-dehydratase [Verrucomicrobiae bacterium DG1235] Length = 368 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 227/350 (64%), Gaps = 20/350 (5%) Query: 3 LIVTGGAGFIGSALCRYLVND----LKIQ----VLVIDKLTYAGNLNSLKEISQSNLFSF 54 ++VTGG GFIGS R L+ D LK + ++ +D LTYAGN +L ++ +S+ + F Sbjct: 4 ILVTGGCGFIGSNFVRVLLRDDAKLLKAKGFDKIINVDSLTYAGNPANLSDLEKSDAYVF 63 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 I D++ I S +KE AIV+FAAESHVDRSI + F+ TN+ GT +LE R Sbjct: 64 SHSSILDQDTIASLIKEHSVSAIVHFAAESHVDRSIDTPEPFVETNVTGTLRMLEAARHH 123 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 W+ L +K+ FRFL +STDEV+G+L + F E PY P+SPYSA+KASSD+LV A+ Sbjct: 124 WAKLEGAEKEAFRFLHVSTDEVFGTLGPNDPAFCETTPYAPNSPYSASKASSDFLVRAYF 183 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 HTYG PV+ +NCSNNYGP+ FPEKLIPL +E + +YGDG+ +RDWL+VEDH Sbjct: 184 HTYGFPVVTTNCSNNYGPFQFPEKLIPLVTLNALEAKSLPIYGDGKQIRDWLFVEDHCTG 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----------HTELIR 282 + L+KG +GE Y IGG +E +NI IV I LLD L P S + + +LI Sbjct: 244 ILAALEKGALGETYCIGGRSEMENIQIVKRICSLLDELAPISENENAKKAGIERYEDLIT 303 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +++DRPGHDRRYAI+ + + E GW P E +SG+ KTV WYLDN W R Sbjct: 304 YVKDRPGHDRRYAINCERSEKECGWVPAETFDSGIRKTVQWYLDNQDWCR 353 >gi|225016238|ref|ZP_03705430.1| hypothetical protein CLOSTMETH_00141 [Clostridium methylpentosum DSM 5476] gi|224950996|gb|EEG32205.1| hypothetical protein CLOSTMETH_00141 [Clostridium methylpentosum DSM 5476] Length = 352 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 159/331 (48%), Positives = 225/331 (67%), Gaps = 3/331 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N + ++ IDKLTYAGNL +LK + + ++F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVIYMLNKYDDVNIINIDKLTYAGNLENLKSVEGNEHYTFIQADICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ +++ D +VNFAAESHVDRSI + F+ TN++GT LL + W Sbjct: 65 DAMQAIFDKYEIDYVVNFAAESHVDRSISDPEIFVQTNVLGTVNLLNIAKNAWQTGDDQY 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 KD +FLQ+STDEVYGSL + G F E P +P SPYS++KAS+D+ V A+ TY PV + Sbjct: 125 KDGVKFLQVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASADFFVKAYSDTYKFPVNI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I +++ + +YGDG VRDWLYVEDH +A+ +V++ G+ Sbjct: 185 TRCSNNYGPYQFPEKLIPLMINNVLQHKDLPIYGDGMQVRDWLYVEDHCKAIDMVIRGGK 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV I + + L++++EDR GHDRRY I KI Sbjct: 245 LGEVYNVGGHNERPNITIVKTIIDYIKKNVDDQVGE-HLMKYVEDRKGHDRRYGIAPDKI 303 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K+++GW+P+ E G+ KT+ WYL+N W + Sbjct: 304 KADLGWYPETTFEVGIVKTIKWYLENKTWMQ 334 >gi|237808784|ref|YP_002893224.1| dTDP-glucose 4,6-dehydratase [Tolumonas auensis DSM 9187] gi|237501045|gb|ACQ93638.1| dTDP-glucose 4,6-dehydratase [Tolumonas auensis DSM 9187] Length = 354 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 176/353 (49%), Positives = 232/353 (65%), Gaps = 19/353 (5%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +L+VTGGAGFIG+ Y L +V+V+D LTYAGN+ +L+ + + F F++ +IC Sbjct: 3 KLLVTGGAGFIGANFVHYWLKTHPADRVVVLDALTYAGNIETLRPLMDNPNFRFVKGNIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + L++ Q D +V+FAAESHVDRSI G D FI TNIIGT LL+ R W Sbjct: 63 NSELVEMLLRDEQIDTLVHFAAESHVDRSITGPDAFIETNIIGTHSLLKAARAVWLADPA 122 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF +STDEVYG+L+ F+E Y P+SPYSA+KA+SD+LV A+ HTYG+ Sbjct: 123 NPLPH-RFHHVSTDEVYGTLELTDPAFTESTAYAPNSPYSASKAASDHLVRAYHHTYGLQ 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYG +HFPEKLIPL +T +++ + +YGDG+ +RDWL+VEDH + LVL Sbjct: 182 VTTSNCSNNYGYFHFPEKLIPLCLTNILDNKALPIYGDGKQIRDWLFVEDHCSGIELVLN 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDA-------------LIP--KSYSHTELIRF 283 KG IGE YNIGG NE +NIDIV I L+D L P K S LI + Sbjct: 242 KGVIGETYNIGGVNEWQNIDIVHLICELVDGEFAADNSLASRYPLSPCAKGESAKSLITY 301 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + DR GHDRRYA+ + KI+SE+G+ PQE ++G+ KT+ WYL N WWRPL K Sbjct: 302 VTDRAGHDRRYAVGTEKIQSELGYQPQETFQTGIAKTIKWYLANESWWRPLKK 354 >gi|257456601|ref|ZP_05621796.1| dTDP-glucose 4,6-dehydratase [Treponema vincentii ATCC 35580] gi|257446021|gb|EEV21069.1| dTDP-glucose 4,6-dehydratase [Treponema vincentii ATCC 35580] Length = 366 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 232/343 (67%), Gaps = 18/343 (5%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEI-------SQSNLF 52 +++TGGAGFIGS R L+ +++ +D LTYAGN S+ +I + + + Sbjct: 7 ILITGGAGFIGSNFIRTLLKKDPTFTGRIINLDALTYAGNATSISDIESEFGGDTAAPRY 66 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F+ +ICD+E + S +++ DA+V+FAAESHVDRSILG + F+ TNI+GTF LLE + Sbjct: 67 IFIHGNICDKELVGSIFEKYAIDAVVHFAAESHVDRSILGPEVFLQTNILGTFTLLEAAK 126 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 W ++ F ISTDEVYGSL +G F E PY+P SPYSA+KASSD+LV A+ Sbjct: 127 KAWQTKDGSMRNDVLFHHISTDEVYGSLGAEGYFQETTPYDPRSPYSASKASSDHLVKAY 186 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 HTYG+P+ +SNCSNNYGP+ FPEKLIPL I M+EG + +YGDG +RDW++VEDH R Sbjct: 187 FHTYGLPITVSNCSNNYGPFQFPEKLIPLMILNMLEGKPLPVYGDGMQIRDWIHVEDHNR 246 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH----TELIRFIEDR 287 A+ L+++KGR+GE YNIGG NE NI ++++ L+D + K+ + T LI + DR Sbjct: 247 AVQLIMQKGRVGETYNIGGENEWANIKLLYK---LIDIVSKKAGVNKAKVTALITHVTDR 303 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 GHDRRYAID +K+K+E+GW + E+GL TV WYL N W Sbjct: 304 LGHDRRYAIDCTKLKTELGWKRTFDFETGLAHTVDWYLQNKGW 346 >gi|218134414|ref|ZP_03463218.1| hypothetical protein BACPEC_02317 [Bacteroides pectinophilus ATCC 43243] gi|217989799|gb|EEC55810.1| hypothetical protein BACPEC_02317 [Bacteroides pectinophilus ATCC 43243] Length = 339 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 164/336 (48%), Positives = 229/336 (68%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG Y++ + + Q++ +DKLTYAGN+ +L+ + + F+F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHYMLKEHPEYQIICLDKLTYAGNMETLEPVMDNPNFTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + ++ +PD +VNFAAESHVDRSI F+ TNIIGT +LL+ R++ Sbjct: 61 ADRDAVYALFEKEKPDVVVNFAAESHVDRSITDPGIFLQTNIIGTGVLLDACRIYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYSA+KAS+D LV+A+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSASKASADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ + Sbjct: 172 GLPTTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCRAIDM 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+ +V ++ + +LI ++ DRPGHDRRYA Sbjct: 232 IIHKGRVGEVYNIGGHNERTNLQVV-------KTVLKELGKSEDLITYVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI +E+GW P + G+ KTV WYL+N WW Sbjct: 285 IDPAKIHAELGWEPLTLFDEGIKKTVKWYLENREWW 320 >gi|148259628|ref|YP_001233755.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] gi|146401309|gb|ABQ29836.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] Length = 356 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 221/335 (65%), Gaps = 3/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R ++TGG GFIGSA+ R LV +V+ +DK+TYA + ++L ++ DI Sbjct: 6 LRFLITGGCGFIGSAVVRRLVASTPHEVVTVDKMTYAASEDALGAALGHPRHRLIRADIT 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+A + +PD +++ AAESHVDRSI G +FI TNI GTF+LLE R W++ L + Sbjct: 66 DAAAMRAAFEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDE 125 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +FRF ISTDEV+G+L++G F+E PY+P SPY+A+KA+SD+LV AW HTYG+P Sbjct: 126 PARRRFRFHHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTYGLP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SN +NNYGP+ FPEKLIPL + +EG + +YGDG N+RDWL+VEDH AL + Sbjct: 186 AIVSNTTNNYGPWQFPEKLIPLVLINALEGRPLPVYGDGSNLRDWLFVEDHAEALLAIAL 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 G GE Y IG R N+D+V I LLDA P E LI F+ DRPGHD RY ID Sbjct: 246 TGTPGETYAIGARQPRSNLDVVRAICRLLDARRPDPAGPRERLITFVADRPGHDFRYEID 305 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ ++ + W + E+GL +TV WYL N WWR Sbjct: 306 PARSEAALAWRAAHDFEAGLARTVDWYLANEPWWR 340 >gi|315650485|ref|ZP_07903555.1| dTDP-glucose 4,6-dehydratase [Eubacterium saburreum DSM 3986] gi|315487281|gb|EFU77593.1| dTDP-glucose 4,6-dehydratase [Eubacterium saburreum DSM 3986] Length = 340 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/336 (49%), Positives = 233/336 (69%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG Y+VN +++ +D LTYAGNL +LK + + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHYMVNKYPQDMIINLDLLTYAGNLETLKPVENAPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I +E +PD ++NFAAESHVDRSI + F+ TN++GT LL+ +C + Sbjct: 61 ADRAFIFKLFEEEKPDVVINFAAESHVDRSITDPESFVRTNVMGTTTLLD------ACRT 114 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYS++KA +D VLA+ TY Sbjct: 115 YGIK---RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKAGADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWLYV DH +A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLIISRALNNEELPVYGKGENVRDWLYVTDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG++GE YNIGG+NER N+++V I L+ P+S LI+F+ DRPGHDRRYA Sbjct: 232 IVRKGKVGEIYNIGGHNERTNLEVVKTILKALNK--PES-----LIKFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI++E+GW P+ ++G+ KT+ WYL+N WW Sbjct: 285 IDPTKIETELGWKPEYTFDTGIVKTIDWYLNNKEWW 320 >gi|312888507|ref|ZP_07748078.1| dTDP-glucose 4,6-dehydratase [Mucilaginibacter paludis DSM 18603] gi|311299005|gb|EFQ76103.1| dTDP-glucose 4,6-dehydratase [Mucilaginibacter paludis DSM 18603] Length = 350 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 227/332 (68%), Gaps = 7/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++I+TGGAGFIGS + R V + Q++ +DKLTYAGNL +L +I Q + F++ DI Sbjct: 3 KIIITGGAGFIGSHVVRRFVTQYPEYQIINLDKLTYAGNLANLSDIDQLPNYRFVKGDIV 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I K QPDA+++ AAESHVDRSI EF+ N+IGT LL R W + Sbjct: 63 DAAFIEELFKTEQPDAVIHLAAESHVDRSISNPLEFVMANVIGTVNLLNAARENW----K 118 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D+ RF +STDEVYG+L D+G+F+E+ Y+P SPYSA+KASSD+ V A+ TYG+ V Sbjct: 119 GRYDETRFYHVSTDEVYGTLGDEGMFTEETAYDPHSPYSASKASSDHFVRAYQDTYGMNV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +LSNCSNNYG +HFPEKLIPLAI + + + +YG G+N+RDWL+VEDH RA+ L+ K Sbjct: 179 VLSNCSNNYGSFHFPEKLIPLAIHNIKQNKPIPVYGKGENIRDWLWVEDHARAIDLIFHK 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 + G+ YNIGG+NE KNID++ + +LD + + +E LI F+ DR GHD RYAID+ Sbjct: 239 AKSGKTYNIGGHNEWKNIDLIRLLCSILDKKLGREEGESEKLITFVTDRAGHDLRYAIDA 298 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E GL KTV WYL N W Sbjct: 299 TKLKDELGWTPSITFEQGLEKTVDWYLANQAW 330 >gi|331090579|ref|ZP_08339430.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401019|gb|EGG80614.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 2_1_46FAA] Length = 360 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 225/338 (66%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y++ I+V+ +DKLTYAGNL +L E+ + F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMLKTYGENIKVINVDKLTYAGNLENLSEVENLPNYQFVRADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I E + D +V+FAAESHVDRSI + FI TN++GT +LL + W Sbjct: 65 RDSIEKIFAENEIDRVVHFAAESHVDRSIKEPEVFIKTNVLGTLVLLNAAKKAWEIDDGV 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL+ F E PY+P SPYSA+KASSD+LV A+ TY P Sbjct: 125 YKEDKKFLHVSTDEVYGSLENSDEYFYETTPYDPHSPYSASKASSDFLVKAYMDTYRFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWL+VEDHVR + V +K Sbjct: 185 NITNCSNNYGPYQFPEKLIPLVINNALKGEKLPVYGDGKNVRDWLFVEDHVRGIDAVQEK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----LIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI+I+ I L L+P++ + LI ++ DR GHDRRY Sbjct: 245 GRLYETYNIGGHNEKQNIEIIHIILDTLLELLPENDERRKNISESLITYVTDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KI+ E+GW P+ E G+ KT+ WYL++ W + Sbjct: 305 AIAPDKIEKEVGWTPETKFEVGIKKTIQWYLEHEDWMK 342 >gi|153813185|ref|ZP_01965853.1| hypothetical protein RUMOBE_03601 [Ruminococcus obeum ATCC 29174] gi|149830716|gb|EDM85807.1| hypothetical protein RUMOBE_03601 [Ruminococcus obeum ATCC 29174] Length = 371 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 222/338 (65%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 16 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDKLTYAGNLENLKDIEDRENYTFVKADICD 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I E D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 76 SEAIMKIFDENDIDRVVHFAAESHVDRSIRNPEVFVKTNVLGTLVMLNAAKSAWELPDGT 135 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +FL +STDEVYGSL D G F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 136 FKPDKKFLHVSTDEVYGSLEEDGGFFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 195 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWLYV DH + + +V +K Sbjct: 196 NITNCSNNYGPYQFPEKLIPLIINNALQGKKLPVYGDGKNVRDWLYVMDHAKGIDMVQEK 255 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----LIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI I+ I L ++P+ E LI ++EDR GHDRRY Sbjct: 256 GRLFETYNIGGHNEKQNIQIIHIILDTLQEMLPEGDPRKELVSENLITYVEDRKGHDRRY 315 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KIK E+GW+P+ E G+ T+ W+ ++ W + Sbjct: 316 AIAPDKIKEEVGWYPETCFEDGIRLTIQWFFEHEDWMK 353 >gi|116687027|ref|YP_840274.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia HI2424] gi|116652742|gb|ABK13381.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia HI2424] Length = 338 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 169/331 (51%), Positives = 224/331 (67%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L+ +D ++ V +D LTYAG+L++L ++ ++ F+ DIC Sbjct: 8 VLVTGGAGFIGANFVRHLLESDPQVSVTTLDLLTYAGSLDNLGDDLPGADRHRFVLGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR + S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 68 DRPLVESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRQIWLNDQK 127 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D + RF I TDEVYGSL D F E PY P+SPYSATKASSD+LV A+ HT Sbjct: 128 LGRADAHARRRFHHIGTDEVYGSLGPDDPPFCETTPYAPNSPYSATKASSDHLVRAYFHT 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I +EG+ + +YGDG NVRDWLYV+DH RA+ Sbjct: 188 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVEGTDIPVYGDGANVRDWLYVDDHCRAID 247 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G IGE Y +GG NE +N+DIV I LLDA P+ H L+RF+ DR GHDRRY Sbjct: 248 AVIRRGTIGETYTVGGCNEWRNVDIVALICTLLDARRPEHAPHARLVRFVTDRAGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WYL Sbjct: 308 AIDAGKLARELQWRPAESFETGIVKTLDWYL 338 >gi|312898305|ref|ZP_07757695.1| dTDP-glucose 4,6-dehydratase [Megasphaera micronuciformis F0359] gi|310620224|gb|EFQ03794.1| dTDP-glucose 4,6-dehydratase [Megasphaera micronuciformis F0359] Length = 333 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/337 (48%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIG +V + ++ +D LTYAGNL +L+ I ++ F+F++ DI Sbjct: 1 MNIIVTGGAGFIGGNFVHMMVAKYPQDHIICVDVLTYAGNLETLEPIKDTSNFTFMKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I ++++PD ++NFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 ADRQTIYEIFEQYKPDIVINFAAESHVDRSIENPEAFLRTNIMGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA++D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + +YGDG+NVRDWLYV+DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIINAFNNKKLPVYGDGKNVRDWLYVKDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KGR+GE YNIGG+NER NID+V I L LI ++ DRPGHD+RYA Sbjct: 232 IIRKGRVGEVYNIGGHNERANIDVVKTILSTLG-------KDESLITYVIDRPGHDQRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P+ + + G+ KT+ WY+DN WW Sbjct: 285 IDPTKINNELGWLPKTSFDEGIKKTIQWYMDNQDWWE 321 >gi|124021831|ref|YP_001016138.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9303] gi|123962117|gb|ABM76873.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9303] Length = 364 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 230/343 (67%), Gaps = 9/343 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN-------LNSLKEISQSNLFSF 54 R++VTGGAGFIG AL + L+ + + + +DK +YA + L+ L +++ S + Sbjct: 11 RVLVTGGAGFIGGALIKRLLKESNMIIFNLDKFSYASDHTSIYHTLDKLDKLA-SQRYKP 69 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 LQVD+ D ++A+ E PD + + AAESHVDRSI F +N+ GTF LLE R Sbjct: 70 LQVDLSDPLSTQAAVCEADPDLVFHLAAESHVDRSINNPRIFFESNVEGTFNLLESLRSH 129 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ LS++++ +FR L ISTDEV+GSL D+G F E PY P SPYSATKA+SD+LV AW H Sbjct: 130 YAELSKERRARFRLLHISTDEVFGSLGDQGFFCETSPYQPRSPYSATKAASDHLVQAWIH 189 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P +++NC+NNYGPY FPEKLIPL I +MI + +YG+G+NVRDWL+VEDH+ AL Sbjct: 190 TYGLPAIITNCTNNYGPYQFPEKLIPLVILKMINNEDIPIYGNGKNVRDWLFVEDHIDAL 249 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV G IG RY IGG +ER N +V I ++D L P H + I++++DRPGHD R Sbjct: 250 LLVASNGLIGNRYCIGGTSERTNKQVVESISIIMDKLHPIGVPHIQKIKYVDDRPGHDLR 309 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 YA+D + IK+++GW P GL TV WYLD+ W + + K Sbjct: 310 YAMDINHIKTQLGWKPTFLFNVGLEITVKWYLDHLAWVKHVAK 352 >gi|308048798|ref|YP_003912364.1| dTDP-glucose 4,6-dehydratase [Ferrimonas balearica DSM 9799] gi|307630988|gb|ADN75290.1| dTDP-glucose 4,6-dehydratase [Ferrimonas balearica DSM 9799] Length = 365 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/353 (49%), Positives = 234/353 (66%), Gaps = 21/353 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG+ Y + K +V+V+D LTYAGN +L+ + + F F+ DICD Sbjct: 6 LLVTGGAGFIGANFVLYWLEQHKSDRVIVLDALTYAGNRANLEAVEGNPNFRFVHGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 + S L++ + +V+FAAESHVDRSI G D FI TNIIGT+ LL+ ++ W Sbjct: 66 TALVESLLRDEGVNTLVHFAAESHVDRSITGPDAFIETNIIGTYSLLKASKKVWIDEPKA 125 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF +STDEVYG+L D+ F E Y P+SPYSA+KA+SD+LV A+ HTYG Sbjct: 126 AGQVPVEHRFHHVSTDEVYGTLEKDEAPFKETNQYQPNSPYSASKAASDHLVRAYHHTYG 185 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V SNCSNNYGP+HFPEKLIPL +T ++ + +YGDGQ +RDWLYVEDH R + LV Sbjct: 186 LEVTTSNCSNNYGPFHFPEKLIPLVVTNILHDKPLPIYGDGQQIRDWLYVEDHARGIELV 245 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-------LIPK--------SYSHTELI 281 L +G++GE YNIGG+NE NIDIV I ++ LI K S ELI Sbjct: 246 LNQGQVGENYNIGGHNEWANIDIVKLICMQMNQAFKSNPKLIEKFPLATNAAKGSSEELI 305 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ DR GHDRRYAID++K ++E+G+ P E+ E+G +KT+ WYLDN WW+ + Sbjct: 306 VYVTDRAGHDRRYAIDATKTQNELGYEPVESFETGFSKTLQWYLDNAPWWQAI 358 >gi|332297027|ref|YP_004438949.1| dTDP-glucose 4,6-dehydratase [Treponema brennaborense DSM 12168] gi|332180130|gb|AEE15818.1| dTDP-glucose 4,6-dehydratase [Treponema brennaborense DSM 12168] Length = 395 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 180/368 (48%), Positives = 233/368 (63%), Gaps = 39/368 (10%) Query: 2 RLIVTGGAGFIGSALCRYLV----------NDLKIQVLVI--DKLTYAGNLNSLKEISQS 49 R++VTGGAGFIG YL +D +V+ D LTYAGN SL ++ + Sbjct: 8 RILVTGGAGFIGCNFIHYLFGLSASGGSAFSDAGFDGIVVNLDSLTYAGNPESLADVDAA 67 Query: 50 ----------NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 + F + DICDR + LK++ D IV+FAAESHVDRSI G + FI T Sbjct: 68 FGSGCTDASRRRYFFEKADICDRAAVEEILKKYDVDTIVHFAAESHVDRSISGPEAFIRT 127 Query: 100 NIIGTFILLEETRLWW-----SCLSQDK------KDQFRFLQISTDEVYGSL-DKGLFSE 147 N+ GTF LL+ R +W + DK +D F ISTDEVYGSL + G F+E Sbjct: 128 NVTGTFTLLDAARNFWKKDGAQTAAGDKISSGPFRDGVLFHHISTDEVYGSLGETGYFTE 187 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 PY+P SPYSA+KASSD+LV+A+ HTYG+PV LSNC+NNYGPY FPEKL+PL I M E Sbjct: 188 TTPYDPRSPYSASKASSDHLVMAYFHTYGLPVTLSNCTNNYGPYQFPEKLLPLMILNMTE 247 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE-IGFL 266 G + +YGDG+N+RDW+YVEDH RA++ ++K GRIGE+YNIGG NE +NI ++ + I Sbjct: 248 GKALPVYGDGKNIRDWIYVEDHNRAVFSIMKDGRIGEKYNIGGENEWENIRLLDKLIDLT 307 Query: 267 LDALIPKSYSHTELIR----FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 L P+S IR +++DRPGHDRRYAID +KIK+E+GW + E GL TV Sbjct: 308 AQELGPESGKTAAGIRETVTYVKDRPGHDRRYAIDCTKIKTELGWQRKMTFEEGLTATVR 367 Query: 323 WYLDNNWW 330 WYL + W Sbjct: 368 WYLGHPEW 375 >gi|114775634|ref|ZP_01451202.1| dTDP-D-glucose 4,6-dehydratase [Mariprofundus ferrooxydans PV-1] gi|114553745|gb|EAU56126.1| dTDP-D-glucose 4,6-dehydratase [Mariprofundus ferrooxydans PV-1] Length = 367 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 174/360 (48%), Positives = 223/360 (61%), Gaps = 34/360 (9%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + ++VTGGAGFIG RY L +D ++V+ +DKLTYAG+ ++LKE+ + F++ DI Sbjct: 7 VNMLVTGGAGFIGCNFVRYMLASDADVRVINLDKLTYAGSTDNLKELPDQSRHIFVEGDI 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---- 115 CDR I L+E D IV+FAAESHVD SI G + F+ TN++GTF LLE R +W Sbjct: 67 CDRPLIDRLLREHHIDTIVHFAAESHVDNSIAGPEVFVQTNVMGTFTLLEAARQYWMGGA 126 Query: 116 --------------------SCLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNP 153 S D FRF ISTDEVYG+L +G FSE Y P Sbjct: 127 SDAGCETTDGRPDAVTSHQSPVTSHDAPASFRFHHISTDEVYGTLSQGDPAFSEATAYAP 186 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 +SPYSA+KA SD+LV AW HTYG+PV +NCSNNYGPY EK IP I +EG + + Sbjct: 187 NSPYSASKAGSDHLVRAWFHTYGLPVTTTNCSNNYGPYQHGEKFIPTVIRSCLEGKPIPV 246 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 YGDG N+RDWLYVEDH + V+++G GE YNIGG NE N++I I L+D P Sbjct: 247 YGDGSNIRDWLYVEDHCAGIDAVIRRGVPGEVYNIGGINEWTNLNICKLICRLMDEFHPP 306 Query: 274 SYSHT-------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + H LI F++DRPGHD RYAID++K+ + +GW P E ESG+ KTV WYLD Sbjct: 307 ATHHQSPMTSYESLITFVKDRPGHDWRYAIDAAKMGNTLGWQPAETFESGIRKTVRWYLD 366 >gi|325336324|gb|ADZ12598.1| dTDP-D-glucose 4,6-dehydratase [Riemerella anatipestifer RA-GD] Length = 361 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 165/339 (48%), Positives = 235/339 (69%), Gaps = 12/339 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R V +L +++ +D LTYAGNL +LK+I ++F + DI Sbjct: 5 IIITGGAGFIGSHVVREFVKNLPNTKIINLDALTYAGNLENLKDIENEPNYTFERADITK 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ- 120 E +R ++ QPDA+V+ AAESHVDRSI + FI TN++GT LL R +W+ + Sbjct: 65 VEELRKVFEKHQPDAVVHLAAESHVDRSITDPNAFINTNVMGTANLLNLCREFWTLNPEH 124 Query: 121 ------DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ Q F +STDEVYG+L + G F+E+ PY+P SPYSA+KA+SD+LV A+G+ Sbjct: 125 THGNFPDEPRQNLFYHVSTDEVYGALGETGFFTEETPYDPKSPYSASKAASDHLVRAYGN 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P ++SNCSNNYGP HFPEKLIPL I+ +I + +YGDG+ RDWL+V DH +A+ Sbjct: 185 TYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHAKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHD 291 + + + + GE YNIGG NE +NID++ E+ +DA + P+ YS +LI F++DRPGHD Sbjct: 245 FQIFHEAKTGETYNIGGWNEWQNIDLIKELIKQMDAKLGRPEGYSE-KLITFVKDRPGHD 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +RYAID++K+ ++GW P E GL KT+ W+L+N W Sbjct: 304 KRYAIDATKLNKDLGWKPSVTFEEGLAKTIDWFLNNQDW 342 >gi|313206229|ref|YP_004045406.1| dtdp-glucose 4,6-dehydratase [Riemerella anatipestifer DSM 15868] gi|312445545|gb|ADQ81900.1| dTDP-glucose 4,6-dehydratase [Riemerella anatipestifer DSM 15868] gi|315023085|gb|EFT36098.1| dTDP-glucose 4,6-dehydratase [Riemerella anatipestifer RA-YM] Length = 360 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 165/339 (48%), Positives = 235/339 (69%), Gaps = 12/339 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R V +L +++ +D LTYAGNL +LK+I ++F + DI Sbjct: 4 IIITGGAGFIGSHVVREFVKNLPNTKIINLDALTYAGNLENLKDIENEPNYTFERADITK 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ- 120 E +R ++ QPDA+V+ AAESHVDRSI + FI TN++GT LL R +W+ + Sbjct: 64 VEELRKVFEKHQPDAVVHLAAESHVDRSITDPNAFINTNVMGTANLLNLCREFWTLNPEH 123 Query: 121 ------DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ Q F +STDEVYG+L + G F+E+ PY+P SPYSA+KA+SD+LV A+G+ Sbjct: 124 THGNFPDEPRQNLFYHVSTDEVYGALGETGFFTEETPYDPKSPYSASKAASDHLVRAYGN 183 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P ++SNCSNNYGP HFPEKLIPL I+ +I + +YGDG+ RDWL+V DH +A+ Sbjct: 184 TYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHAKAI 243 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHD 291 + + + + GE YNIGG NE +NID++ E+ +DA + P+ YS +LI F++DRPGHD Sbjct: 244 FQIFHEAKTGETYNIGGWNEWQNIDLIKELIKQMDAKLGRPEGYSE-KLITFVKDRPGHD 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +RYAID++K+ ++GW P E GL KT+ W+L+N W Sbjct: 303 KRYAIDATKLNKDLGWKPSVTFEEGLAKTIDWFLNNQDW 341 >gi|296125327|ref|YP_003632579.1| dTDP-glucose 4,6-dehydratase [Brachyspira murdochii DSM 12563] gi|296017143|gb|ADG70380.1| dTDP-glucose 4,6-dehydratase [Brachyspira murdochii DSM 12563] Length = 351 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/334 (50%), Positives = 230/334 (68%), Gaps = 10/334 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIG+ +Y+ I+V+ ID LTYAGN+ +L +I + + F +V+ Sbjct: 7 VLVTGGCGFIGTNFIKYIFEKTSYDIKVINIDDLTYAGNIKNLIDIKNKYKDRYYFERVN 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + + S ++++PD +V+FAAESHVDRSI G F+ TNIIGTF LLE R W Sbjct: 67 ICDAKKVNSIFQKYKPDCVVHFAAESHVDRSIFGPKNFVETNIIGTFTLLEAARNLW--- 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +D D F ISTDEVYGSL D G F E Y+P SPYSA+KASSD++V A+ HTY + Sbjct: 124 -KDNADGKLFHHISTDEVYGSLSDTGYFYETTAYDPRSPYSASKASSDHIVKAYYHTYNL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +SNCSNNYGPY FPEKLIPL I +IE ++ +YGDG+N+RDW++VEDH A+ ++ Sbjct: 183 PVTISNCSNNYGPYQFPEKLIPLMILNIIEEKYLPVYGDGKNIRDWIFVEDHNNAVLDII 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KGR+GE YNIGG NE NID+V + L + + K + +LI+F++DR GHDRRYAI Sbjct: 243 NKGRVGETYNIGGENEMTNIDMVNILCEKLASKMNKEKDYYKKLIKFVKDRAGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + KIK+E+GW Q + + ++ T+ WYL+N W Sbjct: 303 NCEKIKNELGWKRQYDFNTAIDITIDWYLNNKEW 336 >gi|170703708|ref|ZP_02894433.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria IOP40-10] gi|170131381|gb|EDS99983.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria IOP40-10] Length = 338 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 166/331 (50%), Positives = 227/331 (68%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L+ +D ++ V+ +D LTYAG+L++L ++ ++ F+ DIC Sbjct: 8 VLVTGGAGFIGANFVRHLLESDPQVSVVTLDLLTYAGSLDNLGDDMPGADRHQFVLGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR + S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 68 DRPLVESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRQLWLNDQK 127 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + RF I TDEVYGSL D FSE PY P+SPYSATKASSD+LV A+ HT Sbjct: 128 LGRAEAHARRRFHHIGTDEVYGSLGPDDPPFSETTPYAPNSPYSATKASSDHLVRAYFHT 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I ++G+ + +YGDG NVRDWLY++DH RA+ Sbjct: 188 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVDGTDIPVYGDGANVRDWLYIDDHCRAID 247 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G +GE YN+GG NE +N+DIV I LLD P+ H L+RF+ DRPGHDRRY Sbjct: 248 AVIRRGTVGETYNVGGWNEWRNVDIVALICALLDERRPERAPHARLVRFVTDRPGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WY+ Sbjct: 308 AIDAGKLARELQWRPAESFETGIVKTLDWYV 338 >gi|160935034|ref|ZP_02082420.1| hypothetical protein CLOLEP_03910 [Clostridium leptum DSM 753] gi|156866487|gb|EDO59859.1| hypothetical protein CLOLEP_03910 [Clostridium leptum DSM 753] Length = 352 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 159/330 (48%), Positives = 225/330 (68%), Gaps = 5/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N ++++ +DKLTYAGNL +LK + + + F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVIYMLNKYSDVKIINVDKLTYAGNLENLKSVESNPNYVFVQADICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I+S ++ D +VNFAAESHVDRSI + F+ TN++GT LL + W+ Sbjct: 65 EAIQSLFDQYDIDYVVNFAAESHVDRSITNPEIFVQTNVLGTVNLLNIAKNAWAVGDDQY 124 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 KD +F+Q+STDEVYGSL +G F E P +P SPYS++KAS+D V A+ TY +PV + Sbjct: 125 KDGVKFMQVSTDEVYGSLGAEGFFMETTPLDPHSPYSSSKASADLFVKAYSDTYKLPVNI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I ++ + +YGDG +RDWLYVEDH +A+ +V++ G+ Sbjct: 185 TRCSNNYGPYQFPEKLIPLMINNTLQHKELPIYGDGMQIRDWLYVEDHCKAIDMVVRGGK 244 Query: 242 IGERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YN+GG+NER NI IV I ++ + + P H +++ + DR GHDRRY ID K Sbjct: 245 LGEVYNVGGHNERPNIVIVKTILEYVKENVDPAVGEH--MMKHVADRKGHDRRYGIDPEK 302 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK ++GW+P+ E G+ KT+ WYL++ W Sbjct: 303 IKRDLGWYPETTFEVGIKKTIQWYLNHKEW 332 >gi|332885218|gb|EGK05469.1| dTDP-glucose 4,6-dehydratase [Dysgonomonas mossii DSM 22836] Length = 354 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 228/332 (68%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN + ++ +D LTYAGNL++LK+I + ++F++ DIC+ Sbjct: 4 IIITGGAGFIGSHVVRLFVNKYPEYNIINLDNLTYAGNLSNLKDIEDKSNYTFIKGDICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + LKE+ D I++ AAESHVDRSI F TN++GT LL+ + +W L + Sbjct: 64 FDLVMQLLKEYHVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKSYWEALPEG 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F ISTDEVYG+L D LF+ED Y+P SPYSA+KASSD+ V A+ TYG+PV Sbjct: 124 YEGK-QFYHISTDEVYGALMFDDTLFTEDTKYDPHSPYSASKASSDHFVRAFHDTYGMPV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I +I + +YG G+NVRDWLYV DH RA+ ++ Sbjct: 183 IVTNCSNNYGPYQFPEKLIPLFINNIIHRKPLPVYGKGENVRDWLYVVDHARAIDVIFHH 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 G+ E YNIGG NE KNIDI+ I +D L+ + H+ +LI ++ DR GHD RYAIDS Sbjct: 243 GKNAETYNIGGFNEWKNIDIIKVIIKTVDRLLGNAEDHSLDLITYVTDRKGHDLRYAIDS 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK+KSE+GW P E G+ TV WYLDN W Sbjct: 303 SKLKSELGWEPSLQFEEGIEITVRWYLDNKEW 334 >gi|254250562|ref|ZP_04943881.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia PC184] gi|124879696|gb|EAY67052.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia PC184] Length = 354 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/331 (51%), Positives = 225/331 (67%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L+ +D ++ V+ +D LTYAG+L++L ++ ++ F+ DIC Sbjct: 24 VLVTGGAGFIGANFVRHLLESDPQVSVVTLDLLTYAGSLDNLGDDLPGADRHRFVLGDIC 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR + S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 84 DRPLVESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRQIWLNDQK 143 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D + RF I TDEVYGSL D F E PY P+SPYSATKASSD+LV A+ HT Sbjct: 144 LGRADALARRRFHHIGTDEVYGSLGPDDPPFCETTPYAPNSPYSATKASSDHLVRAYFHT 203 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I +EG+ + +YGDG NVRDWLYV+DH RA+ Sbjct: 204 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVEGTDIPVYGDGANVRDWLYVDDHCRAID 263 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G IGE Y +GG NE +N+DIV I LLDA P+ H L+RF+ DR GHDRRY Sbjct: 264 AVIRRGTIGETYTVGGCNEWRNVDIVALICTLLDARRPEHAPHARLVRFVTDRAGHDRRY 323 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WYL Sbjct: 324 AIDAGKLARELQWRPAESFETGIVKTLDWYL 354 >gi|148238443|ref|YP_001223830.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7803] gi|147846982|emb|CAK22533.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7803] Length = 343 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 226/335 (67%), Gaps = 7/335 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQ 56 ++VTGGAGFIG A+ R L+ + + +DK YA +L S++ + + + + Sbjct: 1 MLVTGGAGFIGGAVVRRLLTGSQALIFNLDKFGYASDLTSIEGVLKDLGPAAAERHVVQR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ D +A+++ PD +++ AAESHVDRSI G F+T+N++GT+ LL+ R W Sbjct: 61 VDLADAAATAAAVQQADPDLVLHLAAESHVDRSINGPSAFLTSNVLGTYSLLQAVRAHWE 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L Q+++ FRF ISTDEV+GSL G FSE PY+P SPYSA+KA+SD+LV AW HTY Sbjct: 121 RLPQERQSAFRFHHISTDEVFGSLGPTGRFSETTPYDPRSPYSASKAASDHLVNAWHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+L+NCSNNYGP+ FPEKLIP+ I R G + LYGDG NVRDWLYV+DHV AL L Sbjct: 181 GVPVVLTNCSNNYGPWQFPEKLIPVVILRAASGEPIPLYGDGLNVRDWLYVDDHVEALLL 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +GR+G Y +GG++ER N +V I L+D P+S H I ++DR GHDRRYA Sbjct: 241 AATRGRLGASYCVGGDSERTNRQVVEAICSLMDEFKPESAPHDRFITRVKDRLGHDRRYA 300 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID I +E+GW P+ N+E+GL +TV WYL++ W Sbjct: 301 IDPGLITTELGWKPRHNVENGLRQTVRWYLNHLQW 335 >gi|319788851|ref|YP_004090166.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] gi|315450718|gb|ADU24280.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] Length = 339 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 227/338 (67%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS ++++ +++ +DKLTYAGNL++L+ + + F F ++DI Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLDTYSDYRIVCVDKLTYAGNLSTLESVMDNPNFRFCKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE I +E +PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 CDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYS++KA +D LV+A+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTETTPIHTSSPYSSSKAGADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGKGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE +NIDIV LI K E LI ++ DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEMRNIDIV--------KLICKELGKPESLITYVTDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID +KI +E+GW P+ G+ KT+ WYLDN WW+ Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIRWYLDNEKWWK 321 >gi|33637043|gb|AAQ23681.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 337 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 171/334 (51%), Positives = 228/334 (68%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS RY++ +V+ D LTYAGNL +LK++ ++F++ DI Sbjct: 1 MNLLVTGGAGFIGSNFVRYMLEKYPNYKVVNYDLLTYAGNLENLKDVENHPNYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + +K + D IVNFAAESHVDRSI D F+ TN++GT LL+ + + Sbjct: 61 NNRELVDYLVKTHEIDVIVNFAAESHVDRSITDPDIFVKTNVLGTQALLDVAKA-----N 115 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK ++QISTDEVYG+L + G F+E+ P P+SPYSA+KA D LV A+ TYG+ Sbjct: 116 HIKK----YVQISTDEVYGTLGETGYFTEETPLAPNSPYSASKAGGDLLVRAYHETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL IT +EG + +YGDGQN+RDWL+V+DH A+ LV+ Sbjct: 172 VNITRCSNNYGPYHFPEKLIPLMITNALEGKELPIYGDGQNIRDWLHVKDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE YNIGG+NER N +IV I + K +LI+++ DRPGHDRRYAID Sbjct: 232 KGRPGEVYNIGGHNERTNNEIVHLI-------VEKLGVSKDLIKYVADRPGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KI +E+GW PQ E G+ +T+ WY+DN WW+ Sbjct: 285 TKIMTELGWKPQYTFEKGIAETIQWYIDNQEWWK 318 >gi|326336358|ref|ZP_08202529.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691532|gb|EGD33500.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 340 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 169/330 (51%), Positives = 225/330 (68%), Gaps = 7/330 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIG+ Y LV +DKLTYAG+L +L E+ ++ ++F+Q DIC+ Sbjct: 4 ILITGGAGFIGANFVVYFAKKYPNYHLVNLDKLTYAGDLGNLTEVEKAPNYTFVQGDICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 R+ I +++ +++FAAESHVD SI+ D FITTNI GTF LL+ R W + Sbjct: 64 RKLIEDLFEKYHFQGVIHFAAESHVDNSIVNPDTFITTNIHGTFTLLDVARHHWMEAPFV 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + RF ISTDEVYGSL + GLF+E Y P+SPYSA+KASSD +V A+ HTYG+ Sbjct: 124 VKEGYKEARFHHISTDEVYGSLGETGLFTEATAYAPNSPYSASKASSDMIVRAYFHTYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V SNCSNNYGP EKLIP I + ++G + +YGDG+N+RDWLYV DH + LV Sbjct: 184 NVTTSNCSNNYGPKQHKEKLIPTIIRKALQGETIPIYGDGKNIRDWLYVLDHCTGIDLVF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYA 295 KG+ GE YNIGG NER N+ I I LLD +PK SH ELI F++DR GHDRRYA Sbjct: 244 HKGKAGETYNIGGRNERNNLFIAGYICELLDQKRPLPKGKSHKELITFVQDRAGHDRRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID++KI++++GW QEN E+G+ KT+ WYL Sbjct: 304 IDATKIENQLGWHAQENFETGIVKTIDWYL 333 >gi|310644248|ref|YP_003949007.1| dtdp-d-glucose 4,6-dehydratase, rfbb [Paenibacillus polymyxa SC2] gi|309249199|gb|ADO58766.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Paenibacillus polymyxa SC2] Length = 339 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 229/333 (68%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ +++ ID LTYAGNL +LK I +F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFVLYMLKQHPDYEIVNIDALTYAGNLENLKSIENHPKHTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + I +++ D +VNFAAESHVDRSIL + F+ TN++GT +LL+ + Sbjct: 61 TDAQAIDQLMQQ-GIDVVVNFAAESHVDRSILEPEVFVKTNVLGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +F+Q+STDEVYGSL + GLF+E+ P P+SPYSA+KA D LV A+ T+G+P Sbjct: 113 --KYNVTKFVQVSTDEVYGSLGETGLFTEETPLQPNSPYSASKAGGDLLVRAYHETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I+R + + +YGDG N+RDWLYVEDH A+ +V+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLMISRALSDQQLPVYGDGLNIRDWLYVEDHCSAIDMVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G++GE YNIGGNNER N+ IV + L + P+S LI +++DRPGHDRRY ID Sbjct: 231 QGKLGEVYNIGGNNERTNVHIVKTV--LEELGKPES-----LISYVQDRPGHDRRYGIDP 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K +E+GW P+ + E+G+ +T+ WYLDN WW Sbjct: 284 TKTMNELGWTPKHSFETGIKETIRWYLDNEEWW 316 >gi|333031061|ref|ZP_08459122.1| dTDP-glucose 4,6-dehydratase [Bacteroides coprosuis DSM 18011] gi|332741658|gb|EGJ72140.1| dTDP-glucose 4,6-dehydratase [Bacteroides coprosuis DSM 18011] Length = 355 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/333 (51%), Positives = 222/333 (66%), Gaps = 8/333 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L++TGGAGFIGS + R VN Q++ +DKLTYAGNL +LK+I + F++ DIC Sbjct: 7 HLLITGGAGFIGSHVIRLFVNKYPDYQIVNLDKLTYAGNLANLKDIEDKPNYQFVKADIC 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S KE+Q D +++ AAESHVDRSI F TN++GT LL+ ++ W + Sbjct: 67 DFERMLSLFKEYQIDGVIHLAAESHVDRSIKDPFTFAQTNVMGTLTLLQAAKIVWGEDFE 126 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DK F +STDEVYG+L D LF+E PY P SPYSA+KASSD+ V A+ TYG+P Sbjct: 127 DK----LFYHVSTDEVYGALEFDDTLFTETTPYAPHSPYSASKASSDHFVRAYHDTYGMP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYV DH RA+ LV Sbjct: 183 TVISNCSNNYGPYQFPEKLIPLFIHNIRHKKPLPVYGKGENVRDWLYVVDHARAIDLVFH 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +GRI E YNIGG NE KNID++ I +D + + ++ LI ++ DR GHD RYAID Sbjct: 243 QGRIAETYNIGGFNEWKNIDLIKVIIKTVDEQLGHAAGTSDGLITYVTDRAGHDLRYAID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+KIK E+GW P E G+ KTV WYL+N W Sbjct: 303 STKIKDELGWEPSLQFEEGIAKTVKWYLENQAW 335 >gi|114326766|ref|YP_743923.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] gi|114314940|gb|ABI61000.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] Length = 349 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 217/334 (64%), Gaps = 5/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGSA+ R+L+ D V+ +DK+TYA + ++L+E + ++ DIC Sbjct: 1 MRILVTGGCGFIGSAVIRHLIRDTAHSVVNVDKMTYAASEDALEEALTDPRHTLVKADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +PDA+++ AAESHVDRSI G +F+ TN++GT ++LE R WS + Sbjct: 61 DATAIAQVFATHRPDAVMHLAAESHVDRSIDGPAQFVQTNVVGTLVMLEAAREHWS--AH 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEV+G+L+ G F+E Y+P SPYSA+KA SD+LV AW HTYG+P Sbjct: 119 RPEGGGRFHHISTDEVFGALENGDPPFTETTSYDPRSPYSASKAGSDHLVRAWHHTYGMP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SN +NNYGP+ FPEKLIPL +EG + +YGDG N RDWLYV+DH AL L+ Sbjct: 179 TFVSNTTNNYGPWQFPEKLIPLVTLNALEGKELPVYGDGSNQRDWLYVDDHAEALVRTLE 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G G Y IG R N+++V I +LD L+P + E LIRF+ DRPGHD RY ID Sbjct: 239 RGEPGGTYAIGARQPRSNLEVVRTICSVLDELVPDAGGKRERLIRFVTDRPGHDFRYEID 298 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S+ ++ + W + E G+ +TV WYLD+ WW Sbjct: 299 PSRAEAALDWKAPHDFEKGIRRTVQWYLDHRTWW 332 >gi|254482698|ref|ZP_05095936.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] gi|214037057|gb|EEB77726.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] Length = 353 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 228/350 (65%), Gaps = 20/350 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIG+ Y + +++ D LTYAGN +L + + F F+ DICD Sbjct: 5 LLVTGAAGFIGANFVHYWRSQYPDDRIVAFDALTYAGNRANLASLEGTEGFHFVHADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + L+E D +V+FAAESHVDRSI G D FI TN++GT LL+ R +W L + Sbjct: 65 YDKVLATLREHAVDTLVHFAAESHVDRSITGPDAFIETNVVGTHSLLKAAREYW--LGGE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF +STDEVYGSL D F E+ Y P+SPYSA+KA+SD+LV A+ HTYG+ V Sbjct: 123 GELPHRFHHVSTDEVYGSLASDAPGFYEEQKYEPNSPYSASKAASDHLVRAYLHTYGLQV 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SNCSNNYGPYHFPEKL+PL +T ++ G + +YGDG N+RDWL+V DH R + VL Sbjct: 183 TTSNCSNNYGPYHFPEKLVPLCLTNILRGLPLPVYGDGSNIRDWLFVADHCRGIEKVLLD 242 Query: 240 GRIGERYNIGGNNERKNIDIV------FEIGFLLDALIPKSY---------SHTELIRFI 284 G +GE YNIGGNNE N+DIV + F D+ + + + S +LI F+ Sbjct: 243 GVVGETYNIGGNNEWNNLDIVHLLCEQMDARFAADSSLAQRFPDSPCAGDGSARDLIIFV 302 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 EDR GHD RYAID+SKI SE+G+ P E E+GL+KT+ WYL N WWRPL Sbjct: 303 EDRAGHDWRYAIDASKISSELGYEPAETFETGLSKTLDWYLANEDWWRPL 352 >gi|325680888|ref|ZP_08160425.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 8] gi|324107352|gb|EGC01631.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 8] Length = 342 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 171/340 (50%), Positives = 227/340 (66%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M + VTGGAGFIGS ++++ +++ +DKLTYAGNL++L + + F F+++DI Sbjct: 1 MNIFVTGGAGFIGSNFVFHMLDTYPDYRIVCLDKLTYAGNLSTLAPVMNNPNFRFVKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE I +E +PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 CDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYS++KA +D LV+A+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE KNIDIV LI K E LI +EDR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEMKNIDIV--------KLICKELGKPESLITHVEDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIKWYLDNKEWWETI 323 >gi|189424717|ref|YP_001951894.1| dTDP-glucose 4,6-dehydratase [Geobacter lovleyi SZ] gi|189420976|gb|ACD95374.1| dTDP-glucose 4,6-dehydratase [Geobacter lovleyi SZ] Length = 359 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 228/331 (68%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS R++ + +V+ +D LTYAGNL +L E+ Q+ + F++ DI D Sbjct: 11 LLVTGGAGFIGSNFINRFMPLNPACRVINLDALTYAGNLKNLTEVEQNPNYRFVKGDIGD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + S L + DA+V+FAAESHVDRSI G + F+ TN++GT +LLEE+R W Sbjct: 71 AALVASLLSGEKVDAVVHFAAESHVDRSITGPEIFVRTNVLGTQMLLEESRKHWQS---G 127 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +FR+ QISTDEVYGSL D G F+E+ P +SPYSA+KA +D LV A+ T+G+P L Sbjct: 128 MVPEFRYYQISTDEVYGSLGDTGFFTEETPLAANSPYSASKAGADLLVRAYHETFGMPTL 187 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +S CSNNYGPYHFPEKLIPL I +I + +YGDG NVRDWL+V+DH A+ +LK Sbjct: 188 VSRCSNNYGPYHFPEKLIPLLIANIIAKKPLPVYGDGSNVRDWLHVKDHGAAIECILKGA 247 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + G YNIGGNNE +NI IV + LLD+ + + LI F++DRPGHDRRYAID+S Sbjct: 248 KPGSVYNIGGNNEWQNIAIVSLVCDLLDSKLGRQPGENRSLITFVKDRPGHDRRYAIDAS 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K+++GW P E+G+ +T+ WYL N W Sbjct: 308 KLKNDLGWSPSYTFETGIAETIDWYLANQQW 338 >gi|228474127|ref|ZP_04058868.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga gingivalis ATCC 33624] gi|228274641|gb|EEK13482.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga gingivalis ATCC 33624] Length = 340 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 167/331 (50%), Positives = 227/331 (68%), Gaps = 7/331 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIG+ Y N LV +DKLTYAG+L++L E+ +++ ++F+Q DIC Sbjct: 3 HILITGGAGFIGANFVVYFANKYPDYHLVNLDKLTYAGDLSNLVEVEKASNYTFVQGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SC 117 DR + S +++ +++FAAESHVD SI D FITTNI GTF LL+ R W Sbjct: 63 DRALVESLFEKYHFQGVIHFAAESHVDNSIANPDAFITTNIHGTFTLLDVARHHWMEAPF 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + ++ + RF ISTDEVYG+L + GLF+E PY P+SPYSA+KASSD +V A+ HTYG Sbjct: 123 VVKEAYKEARFHHISTDEVYGTLGETGLFTETTPYAPNSPYSASKASSDMIVRAYFHTYG 182 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V SNCSNNYGP EKLIP I + ++G + +YGDG+NVRDWLYV DH + LV Sbjct: 183 MNVTTSNCSNNYGPKQHKEKLIPTIIRKALQGEAIPIYGDGKNVRDWLYVLDHCIGIDLV 242 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRY 294 +G+ GE YNIGG NER N+ I I +LD +P S+ +LI F++DR GHDRRY Sbjct: 243 FHQGKAGETYNIGGRNERNNLFIAGHICEILDQKRPLPNGKSYKDLISFVQDRAGHDRRY 302 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID++KI++++GW QEN E+G+ KT+ WYL Sbjct: 303 AIDATKIETQLGWRAQENFETGIVKTIDWYL 333 >gi|325662391|ref|ZP_08151000.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471393|gb|EGC74616.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 4_1_37FAA] Length = 358 Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 162/338 (47%), Positives = 222/338 (65%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +DKLTYAGNL +LK++ ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDKLTYAGNLENLKDVEDRENYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I +E D +V+FAAESHVDRSI D F+ TN++GT ++L + W Sbjct: 65 AEAINKIFEENDIDRVVHFAAESHVDRSIKNPDVFVKTNVLGTLVMLNAAKAAWELEDGT 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL++ F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 125 FKEDKKFLHVSTDEVYGSLEEEGEYFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWLYVEDH + + +V +K Sbjct: 185 NITNCSNNYGPYQFPEKLIPLIINNALQGKPLPVYGDGKNVRDWLYVEDHAKGIDMVQEK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----LIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI+I+ I L ++P+ E LI ++ DR GHDRRY Sbjct: 245 GRLFETYNIGGHNEKQNIEIIHIILDTLQEMLPEGDPRKELVSENLITYVTDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KIK E+GW P G+ T+ W+ +N W + Sbjct: 305 AIAPDKIKKEVGWVPDTMFAEGIKLTIKWFFENEDWMK 342 >gi|107029156|ref|YP_626251.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia AU 1054] gi|105898320|gb|ABF81278.1| dTDP-glucose 4,6-dehydratase [Burkholderia cenocepacia AU 1054] Length = 338 Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 169/331 (51%), Positives = 223/331 (67%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGGAGFIG+ R+L+ +D ++ V +D LTYAG+L++L ++ ++ F+ DIC Sbjct: 8 VLVTGGAGFIGANFVRHLLESDPQVSVTTLDLLTYAGSLDNLGDDLPGADRHRFVLGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----S 116 DR S L++ D +V+FAAESHVDRSI G EF+ TN++GT+ LL+ R W Sbjct: 68 DRPLAESLLRDHAIDTVVHFAAESHVDRSIDGPGEFVRTNVLGTWTLLDACRQIWLNDQK 127 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D + RF I TDEVYGSL D F E PY P+SPYSATKASSD+LV A+ HT Sbjct: 128 LGRADAHARRRFHHIGTDEVYGSLGPDDPPFCETTPYAPNSPYSATKASSDHLVRAYFHT 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +NCSNNYGP EK IP I +EG+ + +YGDG NVRDWLYV+DH RA+ Sbjct: 188 YGLPVTTTNCSNNYGPRQHGEKFIPTVIRHCVEGTDIPVYGDGANVRDWLYVDDHCRAID 247 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+++G IGE Y +GG NE +N+DIV I LLDA P+ H L+RF+ DR GHDRRY Sbjct: 248 AVIRRGTIGETYTVGGCNEWRNVDIVALICTLLDARRPEHAPHARLVRFVTDRAGHDRRY 307 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID+ K+ E+ W P E+ E+G+ KT+ WYL Sbjct: 308 AIDAGKLARELQWRPAESFETGIVKTLDWYL 338 >gi|116071142|ref|ZP_01468411.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. BL107] gi|116066547|gb|EAU72304.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. BL107] Length = 371 Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 228/336 (67%), Gaps = 7/336 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGG GFIG A+ R L+ + V +DK+ YA +L S++E+ + L Sbjct: 13 RVLVTGGGGFIGGAVVRRLLRESNAIVFNLDKMGYASDLTSIEEVINELGVEHQDRHQLL 72 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+CD E ++ A++ PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R + Sbjct: 73 PIDLCDAEAVQQAVEIADPDLVMHLAAESHVDRSISGPGVFIESNVTGTYNLLQAVRSHF 132 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L+ ++++QFR ISTDEV+GSL + G FSE PY+P SPYSA+KA+SD+LV AW HT Sbjct: 133 EQLATERREQFRLHHISTDEVFGSLGREGRFSETTPYDPRSPYSASKAASDHLVQAWHHT 192 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+PV+L+NCSNNYGP+ FPEKLIP+ + G + LYGDG N+RDWLYVEDHV AL Sbjct: 193 FGLPVVLTNCSNNYGPWQFPEKLIPVVALKAAAGDSIPLYGDGLNIRDWLYVEDHVDALL 252 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L +G G Y +GG+ E+ N ++V I LD P+S H +LI+ + DRPGHDRRY Sbjct: 253 LAACQGTAGRSYCVGGHGEKTNQEVVSAICHQLDQERPESAPHAKLIQRVTDRPGHDRRY 312 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID S+I +E+GW P+ N+E GL +TV WYL + W Sbjct: 313 AIDPSRISTELGWQPRHNVEEGLAETVSWYLSHQDW 348 >gi|295110603|emb|CBL24556.1| dTDP-glucose 4,6-dehydratase [Ruminococcus obeum A2-162] Length = 360 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 222/338 (65%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFQKYDNEIRIINVDKLTYAGNLENLKDIENRENYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I E D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 65 SEAIMKIFDENDIDRVVHFAAESHVDRSIRNPEVFVKTNVLGTLVMLNAAKSAWELPDGT 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +FL +STDEVYGSL D G F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 125 FRPDKKFLHVSTDEVYGSLEEDGGFFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWLYV DH + + +V +K Sbjct: 185 NITNCSNNYGPYQFPEKLIPLIINNALQGKKLPVYGDGKNVRDWLYVMDHAKGIDMVQEK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI I+ I L ++P K+ LI ++EDR GHDRRY Sbjct: 245 GRLFETYNIGGHNEKQNIQIIHIILDTLQEMLPDNDPRKALVSENLITYVEDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KIK E+GW+P+ E G+ T+ W+ ++ W + Sbjct: 305 AIAPDKIKEEVGWYPETCFEDGIRLTIEWFFEHEDWMK 342 >gi|39997462|ref|NP_953413.1| dTDP-glucose 4,6-dehydratase [Geobacter sulfurreducens PCA] gi|39984353|gb|AAR35740.1| dTDP-glucose 4,6-dehydratase [Geobacter sulfurreducens PCA] gi|298506398|gb|ADI85121.1| dTDP-glucose 4,6-dehydratase [Geobacter sulfurreducens KN400] Length = 358 Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 231/331 (69%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS +L + +V+ +D LTYAGNL +L + Q+ + F++ DI D Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R L E + DA+V+FAAESHVDRSILG + F+ TN++GT +LLEE+R W + + Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L + G F+E+ P P+SPYSA+KA SD LV A+ T+G+PVL Sbjct: 130 R---FRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVL 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGP+ FPEKLIPL I ++ G + +YGDG+NVRDWL+V+DH A+ VLK G Sbjct: 187 TTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVLKGG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + GE +N+GGNNE NIDIV + LLD + + + LI F++DR GHDRRYAI ++ Sbjct: 247 KPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRYAISAA 306 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIK E+GW P E G+ +TV WYL N W Sbjct: 307 KIKRELGWEPSYTFERGIAETVDWYLANRAW 337 >gi|291543270|emb|CBL16379.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 18P13] Length = 344 Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 170/337 (50%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS L + +++ +DKLTYAGNL++L+E + F F++ DI Sbjct: 1 MTIIVTGGAGFIGSNFVYLQLKEHPEDRIICLDKLTYAGNLSTLQEAMEHPNFRFIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ PD +VNFAAESHVDRSI F+ TNI+GT +L++ R Sbjct: 61 ADRAAVEQLFEQEHPDIVVNFAAESHVDRSIENPGIFLQTNIMGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+ED P + SSPYS++KA +D LVLA+ T+ Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEDTPIHTSSPYSSSKAGADLLVLAYYRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWLYVEDH +A+ L Sbjct: 172 GLPVSITRCSNNYGPYHFPEKLIPLMISRALADEALPVYGKGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V++KGR GE YN+GG+NER N+++V I L + P+S LI F+ DRPGHD RYA Sbjct: 232 VMRKGRAGEVYNVGGHNERTNLEVVKTI--LKELGKPES-----LITFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI SE+GW P+ E G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIHSELGWLPETKFEDGIRQTIQWYLDNKKWWQ 321 >gi|332519460|ref|ZP_08395927.1| dTDP-glucose 4,6-dehydratase [Lacinutrix algicola 5H-3-7-4] gi|332045308|gb|EGI81501.1| dTDP-glucose 4,6-dehydratase [Lacinutrix algicola 5H-3-7-4] Length = 342 Score = 332 bits (850), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 166/329 (50%), Positives = 222/329 (67%), Gaps = 5/329 (1%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFIGS Y L + + VL +DKLTYAG++++LKE+ ++ ++F+Q DICD Sbjct: 10 LLITGGAGFIGSNFIPYYLETNPDVHVLNLDKLTYAGDISNLKELENNDRYTFVQGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +++FAAESHVD SI FI TNI GTF LL+ + W Sbjct: 70 RALVEKLFEAHNFIGVIHFAAESHVDNSIKNPSAFIDTNITGTFNLLDVAKKHWMEGPNQ 129 Query: 122 KKDQF---RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K F RF ISTDEVYG+L GLF+E PY P+SPYSA+KA+SD+++ ++ HTYG+ Sbjct: 130 VKAGFENARFHHISTDEVYGTLGVTGLFTEQTPYAPNSPYSASKAASDFIIRSYFHTYGM 189 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP I + I G + +YGDG+N+RDWLYV DH + + L Sbjct: 190 NVVTTNCSNNYGPKQHDEKLIPTIIRKAISGESIPIYGDGKNIRDWLYVLDHCKGIALAF 249 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KKG+ GE YNIGG NER N+ IV I +LD + P S+ E I F++DRPGHD RYAID Sbjct: 250 KKGKAGETYNIGGRNERDNLYIVNTICKILDKIKPSKTSYKEQITFVKDRPGHDFRYAID 309 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +SKI++E+ W EN ESG+ KT+ WYL+ Sbjct: 310 ASKIENELAWEANENFESGIQKTIEWYLN 338 >gi|255020601|ref|ZP_05292664.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus caldus ATCC 51756] gi|254969986|gb|EET27485.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus caldus ATCC 51756] Length = 374 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/364 (47%), Positives = 230/364 (63%), Gaps = 24/364 (6%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIG+ C Y L + ++V+D LTYAGN +SL + F F+Q DI Sbjct: 11 RLLVTGGAGFIGANFCHYWLQQHPRATLVVLDALTYAGNRHSLAGLEARPGFRFVQGDIN 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + + +V+FAAESHVDRSI D FI +NI+GT LL + W Q Sbjct: 71 DEALVVRLLRDHRLNVVVHFAAESHVDRSIHDPDAFIRSNILGTHSLLRAAKTVWLDDPQ 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF ISTDEVYGSL G F ED PY P+SPY+A+KA SD+LV A+ HTYG+ Sbjct: 131 GSVPH-RFHHISTDEVYGSLSPGDAPFREDTPYAPNSPYAASKAGSDHLVRAYHHTYGLQ 189 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 SNCSNNYGP+HFPEKLIPL I ++ G + +YGDG+ +RDWLYVEDH R + +L+ Sbjct: 190 TTTSNCSNNYGPFHFPEKLIPLVILNILHGKTLPIYGDGRQIRDWLYVEDHCRGIAQILE 249 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-----------SYSH----TELIRF 283 +G +GE YNIGG NE N+DIV I +DA+ + + +H ELI+ Sbjct: 250 RGTVGESYNIGGCNEWSNLDIVELICAEIDAIFAQDGAWLRRYPQAAPAHGRPSAELIQH 309 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 + DRPGHDRRYAID+SKI+ E+G+ PQ G+ +T+ WYL++ WW+P+ D Sbjct: 310 VRDRPGHDRRYAIDASKIRKELGFAPQYTFAEGIRQTIRWYLEHREWWQPVL-----DGS 364 Query: 344 YSKW 347 Y W Sbjct: 365 YRDW 368 >gi|298209186|ref|YP_003717365.1| dTDP-glucose 4,6-dehydratase [Croceibacter atlanticus HTCC2559] gi|83849113|gb|EAP86982.1| dTDP-glucose 4,6-dehydratase [Croceibacter atlanticus HTCC2559] Length = 350 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/334 (50%), Positives = 226/334 (67%), Gaps = 7/334 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R V + + +D LTYAGNL ++K+I +S+ ++F++ DI Sbjct: 5 QILITGGAGFIGSHVVRRFVKNYPNYHIYNLDALTYAGNLENIKDIEESSNYTFVKGDIT 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S ++ Q D +++ AAESHVDRSI F+ TN+IGT LL + W + Sbjct: 65 DEPFINSLFEKHQFDGVIHLAAESHVDRSITDPLAFVKTNVIGTMTLLNAAKTIW----K 120 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + RF +STDEVYG+L D GLF+ED Y+P+SPYSA+KASSD+ V A+G TYG+P Sbjct: 121 DDFEGKRFYHVSTDEVYGALGDTGLFTEDTAYDPNSPYSASKASSDHFVRAYGETYGLPY 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG YHFPEKLIPL I +I+ + +YGDG RDWL+VEDH A+ LV K Sbjct: 181 VISNCSNNYGSYHFPEKLIPLFINNIIQEKPLPVYGDGNYTRDWLFVEDHAVAIDLVFHK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 G+ E YNIGG NE KNID+V + +D + + + ELI F++DRPGHD RYAID+ Sbjct: 241 GKNHETYNIGGFNEWKNIDLVRLLCQQMDEKLGRDKGTSEELITFVKDRPGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI E+GW P E GL KT+ WYLDN W + Sbjct: 301 SKINKELGWEPSVTFEQGLAKTIDWYLDNEKWLK 334 >gi|329929665|ref|ZP_08283362.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] gi|328935991|gb|EGG32446.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] Length = 340 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 226/333 (67%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ +++ +D LTYAGNL +LK + +SF+Q DI Sbjct: 1 MKLLVTGGAGFIGSNFILYMLQQHPDYRIINMDALTYAGNLENLKSVQHHPNYSFVQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + ++ D +VNFAAESHVDRSIL + F+ TN++GT +LL+ + Sbjct: 61 ADKPAVDAIFQQ-GIDVVVNFAAESHVDRSILEPEIFVNTNVMGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ +STDEVYGSL + GLFSE P P+SPYSA+KA D LV A+ T+G+P Sbjct: 113 --KYGVTKFVHVSTDEVYGSLGETGLFSETTPLAPNSPYSASKAGGDLLVRAYHETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I+R + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLIISRALNDESLPVYGDGLNIRDWLYVEDHCSAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+IGE YNIGGNNER N+ IV I L + P+S LI ++ DRPGHDRRY ID Sbjct: 231 QGKIGEVYNIGGNNERTNVHIVKTI--LNELGKPES-----LITYVTDRPGHDRRYGIDP 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +KI +E+GW P+ N E+G+ +T+ WYL N WW Sbjct: 284 TKIMNELGWKPKHNFETGIKETIQWYLSNKEWW 316 >gi|302669913|ref|YP_003829873.1| dTDP-glucose 4,6-dehydratase RfbB [Butyrivibrio proteoclasticus B316] gi|302394386|gb|ADL33291.1| dTDP-glucose 4,6-dehydratase RfbB [Butyrivibrio proteoclasticus B316] Length = 361 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 228/337 (67%), Gaps = 10/337 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +L+++ + ++F++ DICD Sbjct: 5 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDVLTYAGNLENLRDVEDRDNYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I +E D +V+FAAESHVDRSI+ + F+ TN++GT +L + W Sbjct: 65 RDAINKIFEENDIDRVVHFAAESHVDRSIVNPEVFVQTNVLGTATMLNAAKKAWELPDGS 124 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ +FL +STDEVYGSLD F E PY+P SPYSA+KASSD LV A+ TY P Sbjct: 125 FKEGKKFLHVSTDEVYGSLDDDPNAYFYETTPYSPHSPYSASKASSDMLVKAYMDTYKFP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWL+VEDH +A+ +V + Sbjct: 185 ANITNCSNNYGPYQFPEKLIPLIINNALAGKDLPVYGDGKNVRDWLFVEDHAKAIDMVQE 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLL-----DALIPKSYSHTELIRFIEDRPGHDRR 293 KGR+ E YN+GG+NE++NI+IV I +L D+ K++ +LI+++ DR GHDRR Sbjct: 245 KGRLFETYNVGGHNEKQNIEIVKTIIDVLREELDDSDPRKAHLSYDLIKYVTDRKGHDRR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAI KIK+EIGW P+ G+ KT+ WY +++ W Sbjct: 305 YAIAPDKIKAEIGWEPETMFNEGIRKTIKWYFEHHDW 341 >gi|295695518|ref|YP_003588756.1| dTDP-glucose 4,6-dehydratase [Bacillus tusciae DSM 2912] gi|295411120|gb|ADG05612.1| dTDP-glucose 4,6-dehydratase [Bacillus tusciae DSM 2912] Length = 340 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/332 (51%), Positives = 228/332 (68%), Gaps = 19/332 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++N +V+ +D LTYAGNL +L+ + F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFVHYMLNAHPTYRVVNLDVLTYAGNLENLQNVEDDPRHRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR + + + D IVNFAAESHVDRSIL A F+ TN++GT +LL+ R + Sbjct: 61 CDRSLVFDLVSD-GFDVIVNFAAESHVDRSILDASPFVRTNVLGTQVLLDAVREFGVS-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++Q+STDEVYGSL+ G F+ED P +P+SPYSA+KAS+D LV A HTYGI Sbjct: 118 -------KYIQVSTDEVYGSLNGDGYFTEDTPLSPNSPYSASKASADLLVRATHHTYGID 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+ FPEKLIPL I+ +E + +YGDGQ VRDWL+V DH RA+ V+ Sbjct: 171 VNITRCSNNYGPFQFPEKLIPLTISNALENRSIPVYGDGQQVRDWLHVLDHCRAIDRVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNIGG+NER N+++V I LL+ P+S LI+ ++DRPGHDRRYAID+ Sbjct: 231 HGRPGEVYNIGGHNERTNLEVVKRILSLLNK--PES-----LIQHVQDRPGHDRRYAIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KI+ E+GW PQ E GL +T+ WYLD+ W Sbjct: 284 TKIRRELGWAPQYGFEEGLRQTIQWYLDHQEW 315 >gi|301060790|ref|ZP_07201605.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium NaphS2] gi|300445187|gb|EFK09137.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium NaphS2] Length = 350 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/335 (50%), Positives = 233/335 (69%), Gaps = 14/335 (4%) Query: 3 LIVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 L++TGG GFIGS YL++ D +++ +D LTYAGN +L EI + + + F++ D Sbjct: 5 LLITGGCGFIGSNFIHYLLDESDFTGRIINVDSLTYAGNPENLLEIEERYGDCYVFIKAD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC +E + + +E+ D++ +FAAESHVDRSI+ FI TNI+GTF LLE +R + L Sbjct: 65 ICHKERMAALFEEYDVDSVCHFAAESHVDRSIVEPGAFIQTNIVGTFNLLEASRKHQAKL 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF +STDEV+GSL +GLF+E PY P+SPYSA+KASSD+LV A+ TYG+ Sbjct: 125 K-------RFHHVSTDEVFGSLGPEGLFTETTPYRPNSPYSASKASSDHLVRAYHETYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+ +SNCSNNYGP+ FPEKLIPL I +E + +YGDG NVRDWLYV DH +A++ ++ Sbjct: 178 PITISNCSNNYGPFQFPEKLIPLMILNAMEDRPLPIYGDGLNVRDWLYVGDHCKAVWAIM 237 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYA 295 K+GR GE YNIGGN+E +NI IV I L+D L + S LI F++DR GHDRRYA Sbjct: 238 KRGRRGETYNIGGNHEMENIRIVETICDLIDDLPEMKHKPSRRTLINFVKDRLGHDRRYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+ K++ E+ W P+E+ +SG+ KT+ WYL++ W Sbjct: 298 IDAGKLQKELEWSPEESFQSGIKKTLGWYLEHPSW 332 >gi|224369399|ref|YP_002603563.1| RfbB [Desulfobacterium autotrophicum HRM2] gi|223692116|gb|ACN15399.1| RfbB [Desulfobacterium autotrophicum HRM2] Length = 350 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/340 (49%), Positives = 233/340 (68%), Gaps = 16/340 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIGS RYL+ D +V+ +DKLTYAGN SL++++ + + F ++D Sbjct: 4 VLVTGGCGFIGSNFIRYLLGDTDFSGRVINVDKLTYAGNPASLEDVAVKYPDRYIFEKLD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + I+ + + D + +FAAESHVDRSI + F+ TNI GTF LLE +R+ Sbjct: 64 ICDAQGIQQVFERYAVDTVCHFAAESHVDRSIASPEVFVDTNIKGTFTLLEASRV----- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ RF +STDEVYGSL K G F E Y PSSPYSA+KA+SD+LV A+ HTYG+ Sbjct: 119 ---QQGFSRFHHVSTDEVYGSLGKSGYFVETTSYAPSSPYSASKAASDHLVRAYCHTYGL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V +SNCSNNYGP+ FPEKLIPL I + G + +YGDG N+RDWLYV DH RA+++++ Sbjct: 176 DVTISNCSNNYGPFQFPEKLIPLMILNALGGKPLPIYGDGSNIRDWLYVRDHCRAIWMIM 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY---SHTELIRFIEDRPGHDRRY 294 ++GR GE YN+GG E +N IV+ I L+D + S +L+ FI+DRPGHD RY Sbjct: 236 ERGRSGETYNVGGECEVENRQIVYRICDLVDRTGLAEHARGSSRDLVCFIKDRPGHDFRY 295 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +K+K+E+GW P+E+ E+G+ K+V WYLD+ W R + Sbjct: 296 AIDCTKLKNELGWRPEESFETGMEKSVAWYLDHLDWVRRI 335 >gi|302337210|ref|YP_003802416.1| dTDP-glucose 4,6-dehydratase [Spirochaeta smaragdinae DSM 11293] gi|301634395|gb|ADK79822.1| dTDP-glucose 4,6-dehydratase [Spirochaeta smaragdinae DSM 11293] Length = 356 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 177/358 (49%), Positives = 227/358 (63%), Gaps = 21/358 (5%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 +++TGGAGFIGS RYL D K ++ +D LTYAGN SL +I + + F + Sbjct: 7 ILITGGAGFIGSNFIRYLFEKTDFKGNIVNLDALTYAGNPASLADIQARFGATRYFFEKA 66 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD I + + PDA+V+FAAESHVDRSILG FI TNI+GTF LLE R W Sbjct: 67 DICDAGSIEKVFQHYDPDAVVHFAAESHVDRSILGPGTFINTNILGTFNLLETCRKMW-- 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + F ISTDEVYGSL + G FSE Y+P SPYSA+KASSD+LV A+ HTY Sbjct: 125 ---EGRSDVLFHHISTDEVYGSLGESGYFSETTAYDPRSPYSASKASSDHLVRAYHHTYS 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ LSNCSNNYGPY FPEK+IP+ I M+E + +YGDG+N+RDWLYVEDH A++ + Sbjct: 182 LPITLSNCSNNYGPYQFPEKMIPVMILNMLEDKPLPVYGDGKNIRDWLYVEDHNSAVWQI 241 Query: 237 LKKGRIGERYNIGGNNERKNIDIV---FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + KG +G YNIGG NE +NI +V E+ L P Y +LI +++DRPGHD+R Sbjct: 242 MCKGIVGSSYNIGGENEWENIHLVNKLCELTALQTGKDPDRYK--KLIHYVKDRPGHDQR 299 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 YAID KIK E+GW + + GL TV WYL N W + +Y +W N Sbjct: 300 YAIDCRKIKEELGWQQAFSFDEGLMHTVKWYLSNGSWIEGI-----KSGEYRRWMEQN 352 >gi|134300866|ref|YP_001114362.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum reducens MI-1] gi|134053566|gb|ABO51537.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum reducens MI-1] Length = 362 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 232/339 (68%), Gaps = 17/339 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS + ++N + +++ +D LTYAGNL +LKE+ ++F++ DI Sbjct: 5 KILVTGGAGFIGSNFVKLILNKYPEYKIINVDLLTYAGNLENLKEVCNKPNYTFIKADIR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE I + D++VNFAAESHVDRSI + F+TTN+IGT +LL+ + +W Sbjct: 65 DREIIDHIFSRYI-DSVVNFAAESHVDRSIEEPEVFLTTNVIGTQVLLDTAKKYWKINPN 123 Query: 121 DK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 DK K +F+Q+STDEVYGSL +G+F E MP P+SPYSA+KAS+D +V A+ T Sbjct: 124 DKYCKEYKHGVKFIQVSTDEVYGSLGAEGMFVETMPLMPNSPYSASKASADMIVRAYHKT 183 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P+ ++ CSNNYGPY FPEKLIPL I ++G + +YGDG +RDWL+V DH A+ Sbjct: 184 YSLPINITRCSNNYGPYQFPEKLIPLIINNCLKGKELPVYGDGMQIRDWLHVSDHCSAID 243 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRR 293 VL KG GE YN+GGNNE+ NI+IV LI K+ +E LI++++DRPGHDRR Sbjct: 244 AVLHKGVDGEVYNVGGNNEKANIEIV--------KLIIKTLGKSEDLIKYVKDRPGHDRR 295 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 YAIDS+KI S++GW P + E G+ +T+ WYL N W + Sbjct: 296 YAIDSTKITSQLGWKPTYSFEQGMKETIEWYLKNTDWIK 334 >gi|163814428|ref|ZP_02205817.1| hypothetical protein COPEUT_00579 [Coprococcus eutactus ATCC 27759] gi|158450063|gb|EDP27058.1| hypothetical protein COPEUT_00579 [Coprococcus eutactus ATCC 27759] Length = 339 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 225/337 (66%), Gaps = 23/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +++ +DKLTYAGNL++L+ + + F F+++DI Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLKKYPDYRIICLDKLTYAGNLSTLEPVMDNPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI F+ TNIIGT L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPMIFLQTNIIGTATLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE+KNIDIV +I K E LI + DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEKKNIDIV--------KIICKELGKPESLITHVGDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID +KI +E+GW P+ E G+ KT+ WYLDN WW Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIQWYLDNREWW 320 >gi|260892182|ref|YP_003238279.1| dTDP-glucose 4,6-dehydratase [Ammonifex degensii KC4] gi|260864323|gb|ACX51429.1| dTDP-glucose 4,6-dehydratase [Ammonifex degensii KC4] Length = 327 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/344 (49%), Positives = 233/344 (67%), Gaps = 20/344 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIGS RY++ ++L +DKLTYAGNL++L+++ + F++ DI Sbjct: 1 MRLLVTGGAGFIGSNFIRYILQKHPDWEILNLDKLTYAGNLDNLRDVESLPGYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+VNFAAE+HVDRSI + F+ TN+ G +LLE R Sbjct: 61 ADPELVGELMAEGW-DAVVNFAAETHVDRSIADSSPFVRTNVEGVRVLLEAAR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + FLQ+STDEVYGSL + F+E P P+SPY+A+KA++D L A+ TYG+ Sbjct: 113 --RHKIPLFLQVSTDEVYGSLREEDPPFTESSPLLPNSPYAASKAAADLLCRAYHRTYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+++ CSNN+GPY FPEKLIPLA+T ++EG V +YGDG+N+RDW+YVEDH RAL LVL Sbjct: 171 PVIITRCSNNFGPYQFPEKLIPLAVTNLLEGKPVPVYGDGRNIRDWIYVEDHCRALELVL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E +N+D++ EI LL E + F+ DRPGHD RYA+D Sbjct: 231 LKGRPGEIYNIGGGQEMRNLDLLKEILRLLG-------KGEEYLVFVPDRPGHDWRYALD 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 SSKI+ E+G+ + L++TV WY++N WWW+PL + L+ D Sbjct: 284 SSKIERELGFERKHTFAEALSRTVKWYVENEWWWKPLKERLRDD 327 >gi|257064136|ref|YP_003143808.1| dTDP-glucose 4,6-dehydratase [Slackia heliotrinireducens DSM 20476] gi|256791789|gb|ACV22459.1| dTDP-glucose 4,6-dehydratase [Slackia heliotrinireducens DSM 20476] Length = 356 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 222/333 (66%), Gaps = 8/333 (2%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ I+++ +DKLTYAGNL +LK + ++F QVDICDR Sbjct: 6 LVTGGAGFIGSNFVLYMLKKYDDIRIVNVDKLTYAGNLENLKSVEDDPRYAFRQVDICDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +++ EF D +VNFAAESHVDRSI F+ TN+ GT +L+ + W Sbjct: 66 EAVKAVFDEFDVDYVVNFAAESHVDRSIANPQAFVETNVDGTVNMLQCAKEAWLTGDDTY 125 Query: 123 KDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KD ++LQ+STDEVYG SLD+ F E P +P SPYSA+KAS+D+ V A+G TY +P Sbjct: 126 KDGVKYLQVSTDEVYGTLSLDRPDEFFVETRPLDPHSPYSASKASADFFVKAFGDTYKLP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ CSNNYGPY FPEKLIPL + ++ + +YGDG VRDWLYVEDH +A+ +V+ Sbjct: 186 YNITRCSNNYGPYQFPEKLIPLMLNNCLQHRDLPVYGDGMQVRDWLYVEDHCKAIDMVIN 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +GE YN+GG+NER NI IV I ++ + + P+ +LI+ + DR GHDRRY ID Sbjct: 246 DGVLGEVYNVGGHNERSNIFIVETIIDYVKNNVDPE--VGEQLIKHVTDRKGHDRRYGID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIK ++GW+P+ E G+ KT+ WYLDN W Sbjct: 304 PEKIKRDLGWYPETKFEDGIKKTIAWYLDNQDW 336 >gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 342 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 175/343 (51%), Positives = 228/343 (66%), Gaps = 23/343 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS Y+V Q++ +D LTYAGNL ++KE+ + F++ DI Sbjct: 3 MKVLITGGAGFIGSNFVNYMVQKYPSYQIINLDALTYAGNLENVKEVENEPNYRFVKGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I S E DA+VNFAAESHVDRSI FI TN+ GT +LL+ + Sbjct: 63 TDRELIESLFAE-GIDAVVNFAAESHVDRSIADPGIFIKTNVQGTQVLLDAAK------- 114 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +++QISTDEVYG+L + G F+E P P+SPYSA+KA +D LV A+ TYG+P Sbjct: 115 --KYGVKKYIQISTDEVYGTLGETGYFTETTPLAPNSPYSASKAGADLLVRAYHETYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL I + + +YGDG NVRDWL+VEDH A+ LVL Sbjct: 173 VNITRCSNNYGPYHFPEKLIPLMIINALNNQPLPVYGDGLNVRDWLHVEDHCSAIDLVLH 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GGNNER NI++V I L+ P+S LI F+EDR GHDRRYAID+ Sbjct: 233 HGKNGEVYNVGGNNERTNIEVVKAILRYLNK--PES-----LITFVEDRLGHDRRYAIDA 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKE 337 +KI+ E+GW P+ E GL +T+ WYL+N WW + YKE Sbjct: 286 TKIREELGWQPKYTFEEGLKQTINWYLENRSWWENILSGEYKE 328 >gi|160893015|ref|ZP_02073803.1| hypothetical protein CLOL250_00553 [Clostridium sp. L2-50] gi|156865098|gb|EDO58529.1| hypothetical protein CLOL250_00553 [Clostridium sp. L2-50] Length = 341 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 168/338 (49%), Positives = 231/338 (68%), Gaps = 23/338 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS ++++ + +++ +DKLTYAGNL++L+ + ++ F F++ DICD Sbjct: 5 IIVTGGAGFIGSNFVFHMLDKYPEYRIVCLDKLTYAGNLSTLEPVMKNPNFRFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + +E +PD IVNFAAESHVDRSI D F+ TNI+GT +L++ R Sbjct: 65 RDAVYRLFEEEKPDIIVNFAAESHVDRSIENPDIFLKTNIMGTAVLMDACR--------- 115 Query: 122 KKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA++D LVLA+ TYG+ Sbjct: 116 KYGIERYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTYGL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L++ Sbjct: 176 PVSISRCSNNYGPYHFPEKLIPLMIVNALNDKPLPVYGEGLNVRDWLYVEDHCKAIDLII 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAI 296 KGR+GE YN+GG+NE++NI+IV +I K E LI + DR GHD RYAI Sbjct: 236 HKGRVGEVYNVGGHNEKQNIEIV--------KIICKELGKPESLITHVGDRKGHDMRYAI 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 288 DPTKIHNELGWLPETKFEDGIKKTIQWYLDNREWWETI 325 >gi|300774922|ref|ZP_07084785.1| dTDP-glucose 4,6-dehydratase [Chryseobacterium gleum ATCC 35910] gi|300506737|gb|EFK37872.1| dTDP-glucose 4,6-dehydratase [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 168/339 (49%), Positives = 230/339 (67%), Gaps = 12/339 (3%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R V N+ ++ +D LTYAGNL +LK+I + F + DI Sbjct: 4 IIITGGAGFIGSHVVREFVKNNPDTTIINLDALTYAGNLENLKDIENEPNYVFEKADITK 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ- 120 E +R ++++PDA+V+ AAESHVDRSI FI TN+ GT LL + +W+ Sbjct: 64 PEELRRIFEKYKPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWTLNPDH 123 Query: 121 ------DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+K F +STDEVYGSL + G F E PY+P SPYSA+KA+SD+LV A+G+ Sbjct: 124 THGRFPDEKRTNLFYHVSTDEVYGSLGETGFFLETTPYDPQSPYSASKAASDHLVRAYGN 183 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P ++SNCSNNYGP HFPEKLIPL I+ +I + +YGDG+ RDWL+V DH RA+ Sbjct: 184 TYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHARAI 243 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHD 291 + + K+ + GE YNIGG NE +NID+V E+ +DA + P+ YS +LI F++DRPGHD Sbjct: 244 HQIFKEAKTGETYNIGGFNEWQNIDLVKELIKQMDAKLERPEGYSE-KLITFVKDRPGHD 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +RYAID++K+ ++GW P E GL KT+ WYL+N W Sbjct: 303 KRYAIDATKLNKDLGWKPSVTFEEGLGKTIDWYLENKEW 341 >gi|150004942|ref|YP_001299686.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|237727664|ref|ZP_04558145.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D4] gi|294775785|ref|ZP_06741287.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|149933366|gb|ABR40064.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|229434520|gb|EEO44597.1| dTDP-glucose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] gi|294450371|gb|EFG18869.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus PC510] Length = 358 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 223/332 (67%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN + +++ +DKLTYAGNL +LK+I + F++ DICD Sbjct: 8 IIITGGAGFIGSHVVRLFVNKYPEYRIINLDKLTYAGNLANLKDIEDKPNYIFVKADICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ L +Q D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 68 FGTIQELLVRYQVDGIIHLAAESHVDRSIKDPFTFAQTNVMGTLALLQAAKLYWESLPE- 126 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + RF ISTDEVYG+L D F+E+ Y P SPYSA+KASSD+ V A+ TYG+P Sbjct: 127 KYEGKRFYHISTDEVYGALEFDGTFFTEETKYQPHSPYSASKASSDHFVRAFHDTYGMPT 186 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DH RA+ L+ + Sbjct: 187 VVTNCSNNYGPYQFPEKLIPLFINNIRHGKPLPVYGRGENVRDWLYVVDHARAIDLIFHQ 246 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 GR + YNIGG NE KNID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 247 GRTADTYNIGGFNEWKNIDLIKVIIKTVDRLLGNPEGTSECLITYVTDRKGHDLRYAIDS 306 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E G+ +TV WYLDN W Sbjct: 307 NKLKHELGWEPSLQFEEGIERTVRWYLDNQEW 338 >gi|53712100|ref|YP_098092.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis YCH46] gi|52214965|dbj|BAD47558.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis YCH46] Length = 356 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 166/333 (49%), Positives = 228/333 (68%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R +N + +++ +DKLTYAGNL +L ++ ++ ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFINKYPEYRIINLDKLTYAGNLANLHDVESASNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQ 120 + + E++ D I++ AAESHVDRSI F TN++GT LL+ R +W C Sbjct: 67 FDKLIDIFSEYKIDGIIHLAAESHVDRSIKDPLTFARTNVMGTLCLLQAARQMWEEC--P 124 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K D RF ISTDEVYG+L D F+E Y+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 125 EKYDGKRFYHISTDEVYGALRSDGTYFTESTKYDPHSPYSASKASSDHFVRAYHDTYGMP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGPY FPEKLIPL I + +G + +YG G+NVRDWLYVEDH RA+ L+ Sbjct: 185 TIVTNCSNNYGPYQFPEKLIPLFINNIRQGKPLPVYGKGENVRDWLYVEDHARAIDLIFH 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG+I + YNIGG NE KNID++ I +D L+ + +E LI ++ DR GHD RYAID Sbjct: 245 KGKIADTYNIGGFNEWKNIDLIKVIIKTVDRLLGNAEGISEHLITYVTDRAGHDLRYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K+K E+GW P E G+ +TV WYLDN W Sbjct: 305 STKLKKELGWKPSLQFEEGIERTVRWYLDNQEW 337 >gi|167753450|ref|ZP_02425577.1| hypothetical protein ALIPUT_01724 [Alistipes putredinis DSM 17216] gi|167658075|gb|EDS02205.1| hypothetical protein ALIPUT_01724 [Alistipes putredinis DSM 17216] Length = 352 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 224/332 (67%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN +++ +DKLTYAGNL +L++I + ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPDYRIVNLDKLTYAGNLANLRDIENAPNYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + IR ++ D +++ AAESHVDRSI F TN++GT LL+ + W+ + Sbjct: 65 YDTIREVFCKYDIDGVIHLAAESHVDRSIKDPFIFARTNVMGTLSLLQAAKEQWNGNWEG 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF ISTDEVYG+L D LF+E+ Y+P SPYSA KASSD+ V A+ TYG+P Sbjct: 125 K----RFYHISTDEVYGALQFDGTLFTEETRYDPHSPYSAAKASSDHFVRAYHDTYGLPT 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYVEDH RA+ L+ K Sbjct: 181 IVTNCSNNYGPYQFPEKLIPLFINNIRHGRPLPVYGKGENVRDWLYVEDHARAIDLIFHK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 GRI E YNIGG NE KNID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 241 GRIAETYNIGGFNEWKNIDLIKVIVRTVDRLLGNPEGESEKLITYVTDRAGHDLRYAIDS 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K+E+GW P E G+ KTV WYLDN W Sbjct: 301 RKLKNELGWEPSLQFEEGIEKTVRWYLDNQEW 332 >gi|306820761|ref|ZP_07454387.1| dTDP-glucose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551210|gb|EFM39175.1| dTDP-glucose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 348 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 163/339 (48%), Positives = 227/339 (66%), Gaps = 15/339 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + +++ ++ +D LTYAGNL +LKE+ ++F++ DICD+ Sbjct: 4 ILVTGGAGFIGSNFVKLIIDIHNYNIINLDLLTYAGNLENLKEVENKANYTFIKGDICDK 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + ++ D +VNFAAESHVDRSI + F+ TNI+GT LLE+ + W DK Sbjct: 64 ELVGEIFTKYNIDTVVNFAAESHVDRSIENPEIFLLTNILGTQNLLEQAKKHWKIKPDDK 123 Query: 123 -----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ +FLQ+STDEVYG+L K G+F+E P +P+SPYS++KA +D LV A+ T+G Sbjct: 124 YSREYKEGVKFLQVSTDEVYGALGKEGMFTELTPLSPNSPYSSSKAGADMLVRAYHETFG 183 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY FPEKLIPL I + +YGDG VRDWL+V+DH A+ V Sbjct: 184 LPVNITRCSNNYGPYQFPEKLIPLMINNCENNKKLPVYGDGMQVRDWLHVKDHCIAIDTV 243 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYA 295 L KG+ G+ YNIGGNNE+ NI+IV LI K+ ++ LI +++DRPGHDRRYA Sbjct: 244 LHKGKTGQVYNIGGNNEKANIEIV--------KLIIKTLGKSDNLIEYVQDRPGHDRRYA 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID++KI SE+GW P E G+ +T+ WY +N W + Sbjct: 296 IDNTKITSELGWAPSYTFEQGIAETIDWYTNNKQWMEKI 334 >gi|317055131|ref|YP_004103598.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] gi|315447400|gb|ADU20964.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] Length = 342 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 169/340 (49%), Positives = 229/340 (67%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M + VTGGAGFIGS ++++ +++ +DKLTYAGNL++L+ + ++ F F+++DI Sbjct: 1 MTIFVTGGAGFIGSNFVFHMLDTYPDYRIVCLDKLTYAGNLSTLEPVMKNPNFRFVKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE I +E +PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 CDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LV+A+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KG++GE YN+GG+NE KNIDIV LI K E LI +EDR GHD RY Sbjct: 232 IIHKGKVGEVYNVGGHNEMKNIDIV--------KLICKELGKPESLIIHVEDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYL+N WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIDWYLNNREWWETI 323 >gi|322420911|ref|YP_004200134.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. M18] gi|320127298|gb|ADW14858.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. M18] Length = 356 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/331 (50%), Positives = 227/331 (68%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS ++ + + +V+ +D LTYAGNL +L + + F++ DICD Sbjct: 10 LLVTGGAGFIGSNFINHFIAGNPRCRVINLDLLTYAGNLKNLTAVEGDANYRFVKGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + DA+ +FAAESHVDRSI G D F+ TN++GT LLE +R + Sbjct: 70 AALVARLLAEEKVDAVAHFAAESHVDRSITGPDIFVRTNVLGTQTLLEASRQ-----HAE 124 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K FRFLQ+STDEVYGSL +G F+E+ P P+SPYSA+KA +D LV A+ T+G+P L Sbjct: 125 KLPDFRFLQVSTDEVYGSLGAEGYFTEETPLAPNSPYSASKAGADLLVRAYFETFGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGPYHFPEKLIPL I +++ + +YGDG NVRDWL+V+DH A+ VLK+G Sbjct: 185 NTRCSNNYGPYHFPEKLIPLMIHNILKKRSLPVYGDGLNVRDWLHVKDHSAAIERVLKQG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 + G+ +N+GGNNE KNIDIV + L+D + + + ELI F++DR GHDRRYAID+S Sbjct: 245 KPGDIFNVGGNNEWKNIDIVKLVCDLMDERLGRGAGESRELITFVKDRKGHDRRYAIDAS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K E+ W P ESG+ +T+ WYL N W Sbjct: 305 KLKRELAWEPSYTFESGIAETIDWYLANQGW 335 >gi|119357788|ref|YP_912432.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides DSM 266] gi|119355137|gb|ABL66008.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 225/333 (67%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS + R+ V + +D LTYAGNL +L +I + + F++ DI Sbjct: 1 MHILVTGGAGFIGSHVVRHFVTGYPSYTITNLDSLTYAGNLENLDDIRHLSNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + S +E + D +++ AAESHVDRSI EF TN++GT LL R W+ Sbjct: 61 TDAALMNSLFEEQRFDGVIHLAAESHVDRSIASPAEFAVTNVLGTVHLLNAARQSWAGNY 120 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q K RF ISTDEVYG+L +G+F+E+ PY+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 121 QGK----RFYHISTDEVYGALGGEGMFTEETPYDPHSPYSASKASSDHFVRAYNDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGPY FPEKLIPL I + G + +YG G+N+RDWL+VEDH +A+ ++ Sbjct: 177 VVISNCSNNYGPYQFPEKLIPLFINNIRNGKPLPVYGKGENIRDWLWVEDHAKAIDVIYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 G+ G+ YNIGGNNE KNID+V ++ ++D+ + + +E LI ++ DR GHD RYAID Sbjct: 237 GGKDGQTYNIGGNNEWKNIDLVRQLCAIMDSKLNRPAGESEKLITYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SSK++ E+GW P E GL +TV WYL N W Sbjct: 297 SSKLQRELGWAPSIQFEEGLERTVDWYLANQHW 329 >gi|108762258|ref|YP_632781.1| dTDP-glucose 4,6-dehydratase [Myxococcus xanthus DK 1622] gi|108466138|gb|ABF91323.1| dTDP-glucose 4,6-dehydratase [Myxococcus xanthus DK 1622] Length = 341 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 171/334 (51%), Positives = 223/334 (66%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGG GFIGS L +YL + +V +DKLTYAGNL SL E+ F++ DI Sbjct: 1 MNVLVTGGCGFIGSNLVKYLRRERPAWTVVNLDKLTYAGNLESLSELEGDPQHVFIRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + + DA+++ AAESHVDRSILG + F+TTN++GT LLE +R Sbjct: 61 GNRELVEHLMSVHAIDAVMHLAAESHVDRSILGPEVFVTTNVLGTQQLLEASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL +STDEVYGSL G F+E P PSSPYSA+K SSD + LA+ HT+ + Sbjct: 114 --ARGVRRFLMVSTDEVYGSLGPTGAFTESSPLQPSSPYSASKTSSDLVALAYHHTFNLD 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYG Y FPEKLIPL + + + +YGDG NVRDWL+VEDH AL L L+ Sbjct: 172 VVVTRCSNNYGRYQFPEKLIPLMVVNALHDKPLPVYGDGGNVRDWLHVEDHCHALLLALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE YNIGG ER+NIDIV I L+ P+S LI++++DRPGHDRRYAID Sbjct: 232 KGRAGEVYNIGGGAERRNIDIVKAILGLVGK--PES-----LIQYVKDRPGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI++E+GW P E GL +TV W++D+ WW+ Sbjct: 285 SKIRAELGWTPAHTFEQGLAETVRWFVDHPAWWQ 318 >gi|258517197|ref|YP_003193419.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257780902|gb|ACV64796.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 352 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 163/335 (48%), Positives = 235/335 (70%), Gaps = 14/335 (4%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS +++++ D + +++ +D LTYAGNL +LK I++++ +F++ DI D Sbjct: 4 ILITGGAGFIGSNFVKFILDRDTQYKIINVDALTYAGNLENLKGIAENSNHTFIKADIRD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I + D +VNFAAESHVDRSI+ + F+TTNI+GT +LL+ + +W D Sbjct: 64 RVKIDEIFSKHNIDTVVNFAAESHVDRSIVEPEIFLTTNILGTQVLLDIAKNYWKVNPDD 123 Query: 122 K-----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K K ++LQ+STDEVYG+L K G+F E MP P+SPYSA+KA +D +V ++ T+ Sbjct: 124 KYCKEYKPGVKYLQVSTDEVYGALGKTGMFVETMPLLPNSPYSASKAGADMIVRSYHETF 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEKLIPL I ++G + +YGDG VRDWL+V DH A+ Sbjct: 184 GMPVNITRCSNNYGPYQFPEKLIPLMIENCLKGKKLPIYGDGMQVRDWLHVYDHCSAIES 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KG +GE YNIGGNNE+ NI+IV L+ + + KS +LI++++DRPGHDRRYA Sbjct: 244 VLNKGVVGEVYNIGGNNEKSNIEIV----KLIISTLGKS---EDLIKYVQDRPGHDRRYA 296 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID++KI +++GW P E G+ +T+ WYL+N W Sbjct: 297 IDNTKITTQLGWAPAYKFEQGMKETIEWYLNNTEW 331 >gi|317401444|gb|EFV82076.1| dTDP-glucose 4,6-dehydratase [Achromobacter xylosoxidans C54] Length = 350 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/334 (49%), Positives = 221/334 (66%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +DKLTYAGN +L + + D+ Sbjct: 1 MSILVTGGAGFIGSNFVLDWLAQGGEPVINLDKLTYAGNRRNLDGLKDDARHELVVGDVG 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + S L+ QP AI++FAAESHVDRSI GA +FI +NI GT+ LLE R +W+ L Sbjct: 61 DTALVASLLRTHQPRAILHFAAESHVDRSIAGAGDFIQSNICGTYGLLEAARSYWAGLVG 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRFL +STDEVYGSL D F+E Y P++PYSA+KA+SD+LV A G T+G+P Sbjct: 121 KAREDFRFLHVSTDEVYGSLAPDAPAFTEASAYQPNNPYSASKAASDHLVRACGRTHGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL ++CSNN+GP FPEKLIP+ I + G + +YGDG +VRDWLYV DH L VL+ Sbjct: 181 VLTTHCSNNFGPRQFPEKLIPVVIHNALAGKPLPVYGDGLHVRDWLYVADHCSGLRKVLE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAI 296 +G GE YN+GG++ER N+D+V + LLD L P++ S+ I + DR GHDRRYAI Sbjct: 241 RGCPGETYNLGGDSERTNLDVVLAVCRLLDQLRPRADGASYKTQIAMVADRAGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+++ + E+GW E +SGL KT+ WYLDN W Sbjct: 301 DTTRARRELGWRAVETFQSGLEKTLGWYLDNPQW 334 >gi|253578779|ref|ZP_04856050.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849722|gb|EES77681.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 339 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 169/340 (49%), Positives = 226/340 (66%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +++ +DKLTYAGNL++L + + F F++ DI Sbjct: 1 MNIIVTGGAGFIGSNFVFHMLKKYPDYRIICLDKLTYAGNLSTLAPVMDNPNFRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 61 CDREAVDKLFEEEHPDIVVNFAAESHVDRSIEDPGIFLQTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA++D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE++NI+IV +I K E LI + DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEKQNIEIV--------KIICKELGKPESLITHVGDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIQWYLDNREWWETI 323 >gi|303230666|ref|ZP_07317416.1| dTDP-glucose 4,6-dehydratase [Veillonella atypica ACS-049-V-Sch6] gi|302514721|gb|EFL56713.1| dTDP-glucose 4,6-dehydratase [Veillonella atypica ACS-049-V-Sch6] Length = 326 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 232/342 (67%), Gaps = 21/342 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIG Y+VN + ++ +D LTYAGNL++L+ I + + F VDI Sbjct: 1 MNIIVTGGAGFIGGNFMHYMVNRYPEDTIICVDALTYAGNLSTLEMIKNKSNYRFHHVDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR +R+ +++ PD +VNFAAESHVDRSI D FI TN++GT +LL+ + + + Sbjct: 61 TDRISMRNIFEQYHPDIVVNFAAESHVDRSITEPDIFIKTNVLGTQVLLDLCKEFGTK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLD----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF Q+STDEVYG L + F+E+ P + SSPYSA+KAS+D LVLA+ T+ Sbjct: 119 -------RFHQVSTDEVYGDLPLNEPELFFTEETPIHASSPYSASKASADLLVLAYFRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P+ +S CSNNYGPYHFPEKLIP+ I + + +YG+G NVRDWLYV DH +A+ L Sbjct: 172 DLPITISRCSNNYGPYHFPEKLIPVMIINALHDKQLPVYGNGSNVRDWLYVLDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG +GE YN+GG+NER N+ +V I +L P+S LI ++ DRPGHD RYA Sbjct: 232 IIRKGTVGEVYNVGGHNERDNLTVVKTILSILGK--PES-----LISYVTDRPGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ID +KI +E+GW P+ + E G+ +T+ W+L++ WWRPL K+ Sbjct: 285 IDPTKITTELGWVPEMSFEEGIAQTIQWFLNHEDWWRPLCKK 326 >gi|212694337|ref|ZP_03302465.1| hypothetical protein BACDOR_03863 [Bacteroides dorei DSM 17855] gi|212662838|gb|EEB23412.1| hypothetical protein BACDOR_03863 [Bacteroides dorei DSM 17855] Length = 358 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 168/332 (50%), Positives = 223/332 (67%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN + +++ +DKLTYAGNL +LK+I + F++ DICD Sbjct: 8 IIITGGAGFIGSHVVRLFVNKYPEYRIINLDKLTYAGNLANLKDIEDKPNYIFVKADICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ L +Q D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 68 FGTVQELLVRYQVDGIIHLAAESHVDRSIKDPFTFAQTNVMGTLALLQAAKLYWESLPE- 126 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + RF ISTDEVYG+L D F+E+ Y P SPYSA+KASSD+ V A+ TYG+P Sbjct: 127 KYEGKRFYHISTDEVYGALEFDGTFFTEETKYQPHSPYSASKASSDHFVRAFHDTYGMPT 186 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DH RA+ L+ + Sbjct: 187 VVTNCSNNYGPYQFPEKLIPLFINNIRHGKPLPVYGRGENVRDWLYVVDHARAIDLIFHQ 246 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 GR + YNIGG NE KNID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 247 GRTADTYNIGGFNEWKNIDLIKVIIKTVDRLLGNPEGTSECLITYVTDRKGHDLRYAIDS 306 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E G+ +TV WYLDN W Sbjct: 307 NKLKHELGWEPSLQFEEGIERTVRWYLDNQEW 338 >gi|119503619|ref|ZP_01625702.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2080] gi|119460681|gb|EAW41773.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2080] Length = 354 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 178/354 (50%), Positives = 227/354 (64%), Gaps = 26/354 (7%) Query: 3 LIVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 L+VTG AGFIG+ + V ND V+ D LTYAGN SL + S F+Q D Sbjct: 5 LMVTGAAGFIGANFVYHWVQAHPND---TVVAYDALTYAGNRASLAPLEASGQLHFVQGD 61 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + + L + D +V+FAAESHVDRSI G D FI TN++GT LL R W L Sbjct: 62 ICDGDRVSQTLVNYDVDTLVHFAAESHVDRSITGPDAFIQTNLVGTHTLLAAARTHW--L 119 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S + RF +STDEV+GSL D F+ED+ Y P+SPYSA+KA SD+LV A+ HTYG Sbjct: 120 SGTGRPH-RFHHVSTDEVFGSLTRDAPAFTEDLRYEPNSPYSASKAGSDHLVRAYHHTYG 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V SNCSNNYGP+HFPEKLIPL +T +++G + +YGDG N+RDWLYV DH R + V Sbjct: 179 LDVTTSNCSNNYGPFHFPEKLIPLCLTNILDGRPLPVYGDGTNIRDWLYVVDHARGIDRV 238 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL----------IPKSYSHTE----LIR 282 + G+ GE YNIGGNNE N+ IV + LDA PKS + LI+ Sbjct: 239 IDSGKSGETYNIGGNNEWANLAIVELLCDHLDACFASEPGLAARFPKSPAVNRESRGLIQ 298 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 F++DR GHD RYAID++KI+ E+G+ P E E+G+ KT+ WYLDN WWRPL + Sbjct: 299 FVDDRAGHDWRYAIDANKIEKELGFVPSETFETGIAKTLNWYLDNEDWWRPLLQ 352 >gi|330837204|ref|YP_004411845.1| dTDP-glucose 4,6-dehydratase [Spirochaeta coccoides DSM 17374] gi|329749107|gb|AEC02463.1| dTDP-glucose 4,6-dehydratase [Spirochaeta coccoides DSM 17374] Length = 339 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 170/336 (50%), Positives = 225/336 (66%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIG Y+ + ++ +DKLTYAGN+ +L + + F F++ DI Sbjct: 1 MKLLVTGGAGFIGGNFIHHYMGRHPQDMIVCLDKLTYAGNMETLASVWNNRNFRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ I S + D +VNFAAESHVDRSIL F+ TN++GT +LL+ +R W Sbjct: 61 ADQPFIMSLFQHENFDMVVNFAAESHVDRSILDPGIFLQTNVMGTGVLLDASRAWGVK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLD----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF Q+STDEVYG L + LF+E+ P + SSPYSA+KA++D LVLA+ TY Sbjct: 119 -------RFHQVSTDEVYGDLPLDRPELLFTEETPLHASSPYSASKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ + Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLVIVNALNDKELPVYGTGENVRDWLYVEDHCRAIDV 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YNIGG NER N+++V EI +L P+S LI F+ DR GHD+RYA Sbjct: 232 VLHEGREGEVYNIGGRNERTNLEVVKEIVKVLGK--PES-----LITFVADRKGHDKRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID SK++ E+GW P+ N E G+ +T+ WYL+N WW Sbjct: 285 IDPSKMERELGWKPETNFEQGIQRTIVWYLENRPWW 320 >gi|150017436|ref|YP_001309690.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] gi|149903901|gb|ABR34734.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] Length = 349 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 167/350 (47%), Positives = 233/350 (66%), Gaps = 10/350 (2%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N + I ++ +DKLTYAGNL +LK I + F++ DICD+ Sbjct: 5 LVTGGAGFIGSNFILYMLNKYEDINIINLDKLTYAGNLENLKSIENDKRYEFVEGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + K++ + +V+FAAESHVDRSI + F TNI+GT +L + W + Sbjct: 65 ELVSMLFKKYHINYVVHFAAESHVDRSIKEPEVFAKTNILGTVNILNCAKNAWET-EKGF 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ +FLQISTDEVYGSL KG F E P +P SPYS++KA +D +V A+ TY +P+ + Sbjct: 124 EEGVKFLQISTDEVYGSLGSKGFFKETTPLDPHSPYSSSKAGADLIVKAYYDTYKMPINI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDHV+A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKRLPVYGDGMNIRDWLFVEDHVKAIDMVINNGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 IGE YNIGG+NER NI IV + ++ + K+ S + LI+++EDR GHDRRY I KI Sbjct: 244 IGEIYNIGGHNERTNIQIVKTVISYINENVDKNVSES-LIKYVEDRKGHDRRYGIAPDKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK-WKNL 350 K E+GW+P+ E G+ +T+ WYLDN W + + DY K +KN+ Sbjct: 303 KKELGWYPETAFEVGIKQTIKWYLDNKEWMKNV-----TSGDYQKYYKNM 347 >gi|33637050|gb|AAQ23687.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 337 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 167/334 (50%), Positives = 228/334 (68%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS RY++N + +++ D LTYAGNL +LK+I ++ + F++ DI Sbjct: 1 MNLLVTGGAGFIGSNFVRYMLNKYPEYKIVNYDLLTYAGNLENLKDIQENPRYVFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K D IVNFAAESHVDRSI F+ TN++GT +LL+ + Sbjct: 61 RNYQLVDYIVKSHHIDVIVNFAAESHVDRSISDPSVFVKTNVLGTQVLLDVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++QISTDEVYGSL D G F+E+ P P+SPYSA+KAS+D LV A+ TYG+ Sbjct: 114 --ANSIQKYVQISTDEVYGSLGDTGYFTEETPLAPNSPYSASKASADLLVRAYHETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL IT +EG + +YGDGQ++RDWLYV+DH A+ LV+ Sbjct: 172 VNITRCSNNYGPYHFPEKLIPLIITNALEGKELPIYGDGQHIRDWLYVKDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YNIGG+NER N +IV I + K LI+++ DRPGHDRRYAID Sbjct: 232 KGKPGEVYNIGGHNERTNNEIVHLI-------VEKLGVSKSLIKYVSDRPGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KI +E+GW PQ + G+ +T+ WY++N WW+ Sbjct: 285 TKIMTELGWKPQYTFDKGIEETIQWYINNKDWWK 318 >gi|300853732|ref|YP_003778716.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] gi|300433847|gb|ADK13614.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 164/329 (49%), Positives = 226/329 (68%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ I+++ DKLTYAGNL +LK IS+++ + F+Q DICDR Sbjct: 5 LVTGGAGFIGSNFIHYMLKKYSDIKIINYDKLTYAGNLENLKSISKNSNYIFIQGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ +++ D ++NFAAESHVDRSI + F+ TN++GT LL+ + W+ + Sbjct: 65 EKLQQLFQKYDIDYVINFAAESHVDRSIRDPEVFVKTNVLGTVALLDTAKNAWT-VEDGF 123 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ ++LQ+STDEVYGSL K G F+E P + SPYS++KAS+D +V A+ TY +PV + Sbjct: 124 KEGKKYLQVSTDEVYGSLGKEGYFTEKTPLDSHSPYSSSKASADLMVKAYFDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYG Y FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ +V+ G+ Sbjct: 184 TRCSNNYGAYQFPEKLIPLVINNCLNKRDIPVYGDGLNIRDWLYVEDHCKAIDMVINSGQ 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YNIGG+NER NI IV I + + S LI+++EDR GHDRRY ID +KI Sbjct: 244 CGEVYNIGGHNERTNIHIVKTIISYIHDNVDSSVGEN-LIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KDELGWYPETKFEDGIVKTIKWYLDNKDW 331 >gi|295792733|gb|ADG29296.1| putative dTDP-glucose 4,6-dehydratase [Paenibacillus alvei] Length = 341 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 171/334 (51%), Positives = 223/334 (66%), Gaps = 19/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIGS Y++ Q++ +D LTYAGNL +L +I + + F++ DI Sbjct: 1 MRLLVTGGAGFIGSNFIIYMLKKYPDYQIVNVDVLTYAGNLENLADIHNNLNYRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + KE D +VNFAAESHVDRSIL D FI TN++GT ILL+ ++ Sbjct: 61 ADVQSMEHIFKE-GFDVVVNFAAESHVDRSILEPDIFIKTNVLGTQILLDASK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+Q+STDEVYGSL + GLF+E P P+SPYSA+KA D LV A+ TYG+ Sbjct: 113 --KYGVTKFVQVSTDEVYGSLGETGLFAETTPLAPNSPYSASKAGGDLLVRAYHETYGLA 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I + G + +YGDGQN+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLMIANALNGKKLPVYGDGQNIRDWLYVEDHCSAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNIGG+NE NI IV ++ + LI+F+EDR GHDRRY ID+ Sbjct: 231 GGRSGEIYNIGGSNEHSNIHIV-------KTILERLGKSDSLIQFVEDRLGHDRRYGIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KI SE+GW P+ E+G+N+T+ WYL+N WW Sbjct: 284 TKIMSELGWKPKHIFETGINETIEWYLNNRIWWE 317 >gi|291521041|emb|CBK79334.1| dTDP-glucose 4,6-dehydratase [Coprococcus catus GD/7] Length = 339 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 168/340 (49%), Positives = 226/340 (66%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +V+ +DKLTYAGNL++L + + F F++ DI Sbjct: 1 MNIIVTGGAGFIGSNFVFHMLKKYPDYRVICLDKLTYAGNLSTLAPVMDNPNFRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ + +E PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDRDAVNQLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKSLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE++NI+IV +I K E LI + DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEKQNIEIV--------RIICKELGKPESLITHVGDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ E G+ KT+ WYL+N WW + Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIQWYLNNREWWETI 323 >gi|302870780|ref|YP_003839416.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302573639|gb|ADL41430.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 316 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 222/323 (68%), Gaps = 17/323 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +Y+++ + +++ D LTYAGNL +LKE+ ++F++ DI DR Sbjct: 4 ILVTGGAGFIGSNFVKYMISKEEYKIINYDALTYAGNLENLKEVENHPYYTFIKGDIVDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K +Q D ++NFAAESHVDRSI D F+ TN++GT +LL+ +R + Sbjct: 64 AKVEEVFKNYQIDYVINFAAESHVDRSIKDPDIFVKTNVLGTQVLLDVSRKFGIK----- 118 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +F+QISTDEVYGSL +G F+E+ P P+SPYSA+KA +D LV A+ TYG+PV + Sbjct: 119 ----KFIQISTDEVYGSLGPEGYFTEESPLAPNSPYSASKAGADMLVRAYFKTYGLPVNI 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNN+GP+ PEK IP I ++ + +YGDGQN+RDWLYVEDH RA+ LV KKGR Sbjct: 175 TRCSNNFGPHQHPEKFIPTVILNALQDKPIPIYGDGQNIRDWLYVEDHCRAIELVFKKGR 234 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 IGE YNIGGNNE KNIDI I LL P+S LI+F+ DRPGHDRRYAIDSSKI Sbjct: 235 IGEVYNIGGNNEWKNIDIAKLILKLLGK--PES-----LIQFVADRPGHDRRYAIDSSKI 287 Query: 302 KSEIGWFPQENMESGLNKTVCWY 324 + E+GW + E L KT+ WY Sbjct: 288 QKELGWKVEYRFEKALLKTIEWY 310 >gi|163754604|ref|ZP_02161726.1| dTDP-D-glucose 4,6-dehydratase [Kordia algicida OT-1] gi|161325545|gb|EDP96872.1| dTDP-D-glucose 4,6-dehydratase [Kordia algicida OT-1] Length = 339 Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 167/329 (50%), Positives = 226/329 (68%), Gaps = 5/329 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y + + +V IDKLTYAG+ +L EI ++F++ DIC+ Sbjct: 6 VLITGGAGFIGSNYIPYFLEQHQDTTVVNIDKLTYAGDQENLAEIRNHKNYNFVEGDICN 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWWSCLSQ 120 R + ++++ A+++FAAESHVD SI D FI TNI GTF LL+ + W +Q Sbjct: 66 RTLLEELFEKYEFKAVIHFAAESHVDNSIKNPDAFIQTNIFGTFNLLDVAKKAWMDGPNQ 125 Query: 121 DKKD--QFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K+D RF ISTDEVYG+L + GLF+E+ Y P+SPYSA+KASSD++V ++ HTYG+ Sbjct: 126 VKEDCDTCRFHHISTDEVYGTLGETGLFTENTSYAPNSPYSASKASSDFIVRSYFHTYGM 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP I + I G ++ +YGDG N+RDWLYV DH + ++LV Sbjct: 186 NVVTTNCSNNYGPKQHDEKLIPTIIRKAISGENIPIYGDGTNIRDWLYVLDHCKGIHLVY 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G+ GE YNIGG NER N+ I I LLD L PK S+ I F++DRPGHD RYAID Sbjct: 246 QNGKAGETYNIGGRNERNNVYIANTICELLDKLQPKEASYKAQITFVKDRPGHDFRYAID 305 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +SKI++E+GW EN ESG+ KT+ WYL+ Sbjct: 306 ASKIENELGWKAAENFESGILKTIEWYLE 334 >gi|56965451|ref|YP_177183.1| dTDP glucose 4, 6-dehydratase [Bacillus clausii KSM-K16] gi|56911695|dbj|BAD66222.1| dTDP glucose 4, 6-dehydratase [Bacillus clausii KSM-K16] Length = 339 Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 226/334 (67%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS +Y+++ Q L +D LTYAGNL +LK++ + ++F++ DI Sbjct: 1 MHILITGGAGFIGSNFVKYMLSKYPDYQFLNVDLLTYAGNLENLKDVKEKANYTFIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+ + ++E D I+NFAAESHVDRSI F+ TNI+GT +LL+ + Sbjct: 61 CDKAAMTKLVREHSIDVIINFAAESHVDRSITNPGAFVQTNIVGTQVLLDIAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ ++LQISTDEVYG+L +G F+E+ P P+SPYS++KA +D LV A+ TYG+ Sbjct: 114 --EQNITKYLQISTDEVYGTLGSEGYFTEETPLQPNSPYSSSKAGADLLVRAYYETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP FPEKLIPL I+ +E + +YGDG+NVRDWL+VEDH A+ LVL Sbjct: 172 VNITRCSNNYGPLQFPEKLIPLMISNALENKPLPVYGDGKNVRDWLHVEDHCSAIDLVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YN+GG+NER NI+IV I L A ELI F+EDR GHDRRYAID Sbjct: 232 KGDAGEVYNVGGHNERTNIEIVETIVEALGA-------SKELITFVEDRLGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K+ ++GW P+ E+G+ +T+ WYL+N WW Sbjct: 285 EKLTKKLGWKPKYTFETGIKETIQWYLENREWWE 318 >gi|15895599|ref|NP_348948.1| dTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum ATCC 824] gi|15025341|gb|AAK80288.1|AE007734_2 DTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum ATCC 824] gi|325509747|gb|ADZ21383.1| DTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum EA 2018] Length = 351 Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 168/334 (50%), Positives = 225/334 (67%), Gaps = 14/334 (4%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N I+++ +DKLTYAGNL +LK Q+ + F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVHYMLNKYNDIKIINVDKLTYAGNLENLKGCEQNPNYVFVQADICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I K + D +VNFAAESHVDRSI + F+ TN++GT LL + W + Sbjct: 65 EAIEDIFKNYDIDYVVNFAAESHVDRSIKMPEIFVQTNVLGTVNLLNIAKNNW-----ET 119 Query: 123 KDQFR----FLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 KD F+ +LQISTDEVYGSL K G F+E P NP SPYSA+KAS+D +V A+ T+ + Sbjct: 120 KDGFKAGKKYLQISTDEVYGSLGKEGFFTETTPLNPHSPYSASKASADMIVKAYFDTFKM 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+ ++ CSNNYGPY FPEKLIPL I + + + +YGDG N+RDWLYVEDH +A+ +VL Sbjct: 180 PINITRCSNNYGPYQFPEKLIPLLINNCLNKNELPVYGDGMNIRDWLYVEDHCKAIDMVL 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G +G YN+GG+NER NI IV I ++ D + S LI+++EDR GHDRRY I Sbjct: 240 NEGELGRVYNVGGHNERTNIFIVKTVIQYIHDNV--DSTVDESLIKYVEDRKGHDRRYGI 297 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D ++IK E+ W+P+ E G+ KT+ WYL N W Sbjct: 298 DPTRIKDELDWYPETKFEVGIVKTIKWYLQNKEW 331 >gi|212550819|ref|YP_002309136.1| dTDP-glucose 4,6-dehydratase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549057|dbj|BAG83725.1| dTDP-glucose 4,6-dehydratase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 371 Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 230/350 (65%), Gaps = 24/350 (6%) Query: 5 VTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 VTGGAGFIGS +YL+ + I+++V+D LTYAGN N+++ + SF++ I D E Sbjct: 6 VTGGAGFIGSNFVKYLLKKYRDIKIVVLDSLTYAGNFNTIEANLEDYRLSFIKGSIGDVE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK- 122 + +++ + ++NFAAESHVDRSI+ F TN++GT LLE T+ +W+ +K Sbjct: 66 VVSDIFQKYPINFVINFAAESHVDRSIIHPRVFFETNVLGTQNLLEITKKYWTIGKNEKG 125 Query: 123 ----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K+ ++LQISTDEVYGSL + G F E P +P SPYSA+KA++D LV A+ TY + Sbjct: 126 YPTYKNFVKYLQISTDEVYGSLGESGCFVETTPLSPHSPYSASKAAADLLVKAYSDTYKM 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV ++ CSNNYGPY FPEKLIPLAI ++EG + +YG GQNVRDW+YVEDH +A+ LVL Sbjct: 186 PVNITRCSNNYGPYQFPEKLIPLAINNILEGRQLPIYGKGQNVRDWIYVEDHCKAIDLVL 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-----------------L 280 KGR GE YN+GGNNERKNID+V I L+ ++ + + L Sbjct: 246 HKGRRGELYNVGGNNERKNIDVVKLIISTTKNLLEENVQYQKVLHLPASKYSLEWVNENL 305 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I F EDR GHD+RYA+D +KI E+GW P E G+ KT+CWYL+N W Sbjct: 306 ISFTEDRLGHDKRYALDFTKITMELGWQPDMQFERGVLKTICWYLENQDW 355 >gi|260174676|ref|ZP_05761088.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] gi|315922939|ref|ZP_07919179.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] gi|313696814|gb|EFS33649.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] Length = 357 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 169/346 (48%), Positives = 229/346 (66%), Gaps = 6/346 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK++ ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDVEDQPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + K++ D +++ AAESHVDRSI F TN++GT LL+ +L W L + Sbjct: 67 FEKMLEIFKQYHIDGVIHLAAESHVDRSIKDPFTFAQTNVMGTLSLLQAAKLTWEILPEC 126 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +D+ RF ISTDEVYG+L D F+E+ Y P SPYSA+KA SD+ V A+ TYG+P Sbjct: 127 YEDK-RFYHISTDEVYGALEFDGTFFTEETKYQPHSPYSASKAGSDHFVRAFHDTYGMPT 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + +G + +YG G+NVRDWLYV DH RA+ L+ Sbjct: 186 IVTNCSNNYGPYQFPEKLIPLFINNIRQGKPLPVYGKGENVRDWLYVVDHARAIDLIFHN 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G E YNIGG NE KNID++ I +D L+ S ++ LI ++ DR GHD RYAIDS Sbjct: 246 GNTAETYNIGGFNEWKNIDLIKVIIKTVDRLLGNSEGTSDHLITYVTDRKGHDLRYAIDS 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPLYKELKPDND 343 +K+K+E+GW P E G+ KTV WYLDN NW + + DND Sbjct: 306 NKLKNELGWEPSLQFEEGIEKTVRWYLDNQNWMDNVTTGDYQKDND 351 >gi|256420556|ref|YP_003121209.1| dTDP-glucose 4,6-dehydratase [Chitinophaga pinensis DSM 2588] gi|256035464|gb|ACU59008.1| dTDP-glucose 4,6-dehydratase [Chitinophaga pinensis DSM 2588] Length = 351 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 163/331 (49%), Positives = 223/331 (67%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN Q++ +D LTYAGNL +LK+I + ++F++ DI D Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPHYQIVNLDALTYAGNLENLKDIKDKSNYTFVKGDITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D +++ AAESHVDRSI+ FI TN++GT LL R +W +D Sbjct: 65 EAFIDELFTTYSFDGVIHLAAESHVDRSIMDPLAFIKTNVLGTATLLNAARKYW----KD 120 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F +STDEVYGSL D+G F+E+ Y+P SPYSA+KASSD+ V+A+ HTY +P + Sbjct: 121 NYEGKLFYHVSTDEVYGSLGDEGFFTEETAYDPRSPYSASKASSDHFVMAYYHTYHLPAI 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYG +HFPEKLIPLAI + V +YG G+NVRDWL+VEDH RA+ + G Sbjct: 181 ISNCSNNYGSHHFPEKLIPLAIHNIKNNKPVPVYGKGENVRDWLFVEDHARAIDTIFHNG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 R+GE YNIGG NE KNID++ + ++D + ++ + +LI F++DR GHD RYAID++ Sbjct: 241 RLGETYNIGGFNEWKNIDLINLLCIVMDKKLGRAPGTSAQLITFVKDRAGHDLRYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ E+GW P E GL KTV WYL N W Sbjct: 301 KLNKELGWAPSLQFEEGLEKTVEWYLTNEEW 331 >gi|323484534|ref|ZP_08089899.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] gi|323402112|gb|EGA94445.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] Length = 346 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/339 (50%), Positives = 225/339 (66%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS ++++ Q++ +D LTYAGNL++L++ ++ F F +VDI Sbjct: 8 MKIIVTGGAGFIGSNFIYHMLDVHPDYQIVCVDCLTYAGNLSTLEKAMSNSNFHFYKVDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C+R + S ++ QPD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 68 CERNDVYSVFQKEQPDMVVNFAAESHVDRSIEEPEVFLDTNIKGTAVLMDACR------- 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG----LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L F+E P + SSPYSA+KA +D LV A+ TY Sbjct: 121 --KFGMVRYHQVSTDEVYGDLPLNRPDLFFTESTPIHTSSPYSASKAGADLLVQAYHRTY 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGP+HFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 179 GLPVTISRCSNNYGPFHFPEKLIPLMIVNALADKPLPVYGEGLNVRDWLYVEDHCKAIDL 238 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KGRIGE YNIGG+NE +NIDIV I L P+S LI ++ DR GHD RYA Sbjct: 239 ILHKGRIGEVYNIGGHNEMRNIDIVRMICQALGK--PES-----LITYVADRKGHDMRYA 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID KI SE+GW P+ E G+ KT+ WYL+N WW + Sbjct: 292 IDPEKINSELGWQPETKFEDGIRKTIQWYLENRRWWESI 330 >gi|193215494|ref|YP_001996693.1| dTDP-glucose 4,6-dehydratase [Chloroherpeton thalassium ATCC 35110] gi|193088971|gb|ACF14246.1| dTDP-glucose 4,6-dehydratase [Chloroherpeton thalassium ATCC 35110] Length = 338 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 166/334 (49%), Positives = 228/334 (68%), Gaps = 20/334 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS Y++ +++ +DKLTYAGNL +L + + + F++ DIC Sbjct: 3 KILVTGGAGFIGSNFIAYMLQKYDDCKIVNLDKLTYAGNLENLISVEKHPNYVFVKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + KE Q D +VNFAAESHVDRSILGA F+ TN++GT LLE + + Sbjct: 63 DRAVTDAIFKEHQIDHVVNFAAESHVDRSILGAKIFVETNVLGTQNLLETAKTF------ 116 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RFLQ+STDEVYG+L K G F+E+ P P+SPYSA+KA +D +V A+ T+ +P Sbjct: 117 ---GVERFLQVSTDEVYGTLGKTGFFTEETPLQPNSPYSASKAGADMMVRAYYETFKLPC 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDWLYVEDH A+ + ++ Sbjct: 174 VITRCSNNYGPYQFPEKLIPLMIANALNDKPLPVYGDGMNVRDWLYVEDHCVAIDVAMRS 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YNIGG+NE+ NI++V +L+ L P+S LI ++ DR GHDRRYAID+ Sbjct: 234 GKNGEVYNIGGHNEKPNIEVV---KLILEKLGKPES-----LITYVTDRLGHDRRYAIDA 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI+ E+GW P+E E+G+ KTV WYL++ WW+ Sbjct: 286 SKIERELGWTPKETFETGMEKTVNWYLEHKAWWQ 319 >gi|332668190|ref|YP_004450978.1| dTDP-glucose 4,6-dehydratase [Haliscomenobacter hydrossis DSM 1100] gi|332337004|gb|AEE54105.1| dTDP-glucose 4,6-dehydratase [Haliscomenobacter hydrossis DSM 1100] Length = 350 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 165/331 (49%), Positives = 228/331 (68%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIG+ L + LV + + +++ +D LTYAGNL +L ++ + + F + DI D Sbjct: 4 ILLTGGAGFIGTHLVKRLVKNYPQYRIVNLDLLTYAGNLTNLADVENAPNYVFRKGDIRD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ I+ EFQ D +++ AAESHVDRSI F+ TNI+GT LL + W S Sbjct: 64 QDLIQGLFDEFQFDGVIHLAAESHVDRSISNPLAFVETNILGTLNLLNVAKANWKDTSNK 123 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF ISTDEVYGSL + G F+E+ Y+P SPYSA+KA SD LV A+ HTYG+P++ Sbjct: 124 -----RFYHISTDEVYGSLGETGFFTEETAYDPRSPYSASKAGSDMLVRAYHHTYGLPIV 178 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPY FPEKLIPL I + + +YGDG RDWL+VEDH A+ L+ +G Sbjct: 179 VSNCSNNYGPYQFPEKLIPLMINNIRNNQPLPVYGDGLYTRDWLWVEDHAAAIDLIYHRG 238 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 +IGE YNIGGNNER+NID+V + ++D L+ +S + +LI F++DRPGHDRRYAID++ Sbjct: 239 KIGETYNIGGNNERRNIDLVHYLCDVMDELLGRSPGTSRQLIHFVKDRPGHDRRYAIDAT 298 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K+E+ W P N E GL +T WYL++ W Sbjct: 299 KLKNELNWEPLVNPEDGLRRTAQWYLEHTDW 329 >gi|33865180|ref|NP_896739.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 8102] gi|33638864|emb|CAE07161.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 8102] Length = 355 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/331 (48%), Positives = 217/331 (65%), Gaps = 7/331 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R++VTGGAGFIG A+ R L+ + + V +DK+ YA +L S++ + Sbjct: 17 RVLVTGGAGFIGGAVVRRLLKESEAIVFNLDKMGYASDLTSIEAVLSELGDGAKQRHQLQ 76 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +VD+ D + +R A+K PD +++ AAESHVDRSI G FI +N+ GT+ LL+ R Sbjct: 77 RVDLADAKAVREAVKAADPDLVMHLAAESHVDRSIAGPGVFIESNVTGTYNLLQAVREHV 136 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 LS ++++ FR ISTDEV+GSL +G FSE PY+P SPYS++KA+SD+LV AW HT Sbjct: 137 EGLSGERQENFRLHHISTDEVFGSLGAEGRFSETTPYDPRSPYSSSKAASDHLVSAWHHT 196 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV+L+NCSNNYGP+ FPEKLIP+ + + LYGDG NVRDWLYVEDHV AL Sbjct: 197 YGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAAREPIPLYGDGLNVRDWLYVEDHVDALL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L KG G Y +GG ER N ++V I LD L P H LI + DRPGHDRRY Sbjct: 257 LAACKGASGRSYCVGGYGERTNREVVECICSHLDQLKPDGAPHARLITRVTDRPGHDRRY 316 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID ++I++E+GW P+ + + + KTV WY+ Sbjct: 317 AIDPTRIETELGWKPRHDFDEAIAKTVQWYI 347 >gi|282856404|ref|ZP_06265683.1| dTDP-glucose 4,6-dehydratase [Pyramidobacter piscolens W5455] gi|282585775|gb|EFB91064.1| dTDP-glucose 4,6-dehydratase [Pyramidobacter piscolens W5455] Length = 336 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 170/337 (50%), Positives = 226/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ YL++ +V+ D LTYAGN+ +L + + FSF++ DI Sbjct: 1 MKIVVTGGAGFIGANFVYYLLHKYPGDRVVCFDALTYAGNMETLAKAAGDPRFSFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + + + ++PD IVNFAAESHVDRSIL F+ TN++GT +L++ R Sbjct: 61 ADRGQVEALFERYRPDVIVNFAAESHVDRSILDPGLFLRTNVLGTGVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG LD+ F+E P + SSPYSA+KASSD LVLA+ T+ Sbjct: 114 --KYGIARFHQVSTDEVYGDLPLDRPDLFFTERTPLHASSPYSASKASSDLLVLAYCRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIANALADKPLPVYGKGENVRDWLYVEDHCAAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++++GR GE YNIGG+NER N+ +V I LD P+S LIRF+ DRPGHD RYA Sbjct: 232 IVRRGRGGEIYNIGGHNERTNLQVVKTILKELDK--PES-----LIRFVTDRPGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P+ + G+ +TV WYL + WWR Sbjct: 285 IDPAKIHAELGWLPETTFDEGIRRTVRWYLSHKEWWR 321 >gi|229016572|ref|ZP_04173512.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1273] gi|229022779|ref|ZP_04179303.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1272] gi|228738591|gb|EEL89063.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1272] gi|228744748|gb|EEL94810.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1273] Length = 323 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 164/339 (48%), Positives = 226/339 (66%), Gaps = 18/339 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + + +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQEHSNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKFVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASADVIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG N+RDWL+V DH RA+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNIRDWLHVTDHCRAIDIVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVQQIITLLGKT-------KKDIEYVADRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K+K+E W P+ E GL +TV WY N WW+PL ++ Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVHWYEKNKEWWKPLKEQ 323 >gi|327537182|gb|EGF23930.1| dTDP-glucose 4,6-dehydratase [Rhodopirellula baltica WH47] Length = 358 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 167/311 (53%), Positives = 211/311 (67%), Gaps = 8/311 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL++TGGAGFIGS L R + QVL +D LTYAGNL SL +I S + F QVDI Sbjct: 7 QRLLITGGAGFIGSNLVRMALA-CGHQVLNVDALTYAGNLASLSDIESSPNYQFAQVDIT 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +A+ +QPDAI++ AAESHVDRSI G +FI TN+IGTF LL+ + + L Sbjct: 66 DVAAIDAAITNYQPDAIMHLAAESHVDRSIDGPGQFIQTNVIGTFNLLQSSLKHYRSLDG 125 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D KD FRFL +STDEVYGSL D GLF+E PY+P SPYSA+KASSD+L AW TYG+PV Sbjct: 126 DAKDSFRFLHVSTDEVYGSLGDTGLFTETTPYDPHSPYSASKASSDHLARAWQDTYGLPV 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIP+ I + + G + +YG G+N+RDWLYVEDH RAL V++K Sbjct: 186 LVTNCSNNYGPYQFPEKLIPVVILKCLRGEPIPVYGRGENIRDWLYVEDHCRALLTVIEK 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGGNNER N+++V + L+D L P+ + + E+RP H R Sbjct: 246 GTPGETYNIGGNNERTNLELVHTLCNLMDELHPRVANGEK-----ENRP-HSGRVEQSEG 299 Query: 300 KIKSEIGWFPQ 310 + I P+ Sbjct: 300 RAIHSIPSLPE 310 >gi|206900525|ref|YP_002250034.1| dTDP-glucose 4,6-dehydratase [Dictyoglomus thermophilum H-6-12] gi|206739628|gb|ACI18686.1| dTDP-glucose 4,6-dehydratase [Dictyoglomus thermophilum H-6-12] Length = 336 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/329 (50%), Positives = 225/329 (68%), Gaps = 8/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y++N + +++ +DKLTYAGNL +LKE+ + + F++ DI + Sbjct: 5 ILITGGAGFIGSNFIHYMLNKYPEYEIVNLDKLTYAGNLENLKEVENNKNYHFVKGDITN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + +EF P +VNFAAESHVDRSI G + F+ TN+ GT +LL+ + +W Sbjct: 65 RELVEHIFEEFNPQYVVNFAAESHVDRSIEGPEIFVKTNVYGTHVLLDVAKEYWE---NK 121 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF+QISTDEVYGSL K F+E+ P P+SPYSATKA +D + ++ TY P Sbjct: 122 KMEDVRFIQISTDEVYGSLPLESKEKFTEESPLRPNSPYSATKAGADLICRSYFITYNFP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ SNN+GP +PEKLIPL I R +EG + +YGDGQNVRDWLYVED+ + + LVL Sbjct: 182 VIITRSSNNFGPRQYPEKLIPLTIKRALEGKPIPVYGDGQNVRDWLYVEDNCKGIDLVLH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGRIGE YNIGG NE KNID+V I G + + + + LI F++DRPGHDRRYA+ Sbjct: 242 KGRIGEIYNIGGGNEWKNIDLVNLICGIIAEIKGEDAERYKRLITFVKDRPGHDRRYALS 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 KIKSE+GW P+ + L TV WY++ Sbjct: 302 IEKIKSELGWKPESDFLEALKFTVKWYME 330 >gi|118580514|ref|YP_901764.1| dTDP-glucose 4,6-dehydratase [Pelobacter propionicus DSM 2379] gi|118503224|gb|ABK99706.1| dTDP-glucose 4,6-dehydratase [Pelobacter propionicus DSM 2379] Length = 356 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 226/331 (68%), Gaps = 6/331 (1%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS +L N+ +V +D LTYAGNL +LK + + F++ DI D Sbjct: 8 LLVTGGAGFIGSNFIHSFLANNSDCRVTNLDSLTYAGNLANLKSLEHHPGYHFVRGDIGD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L + DA+V+FAAESHVDRSI G + F+ TN++GT +LLEE+R W+ Sbjct: 68 SVLVANILAVQKIDAVVHFAAESHVDRSISGPEIFVRTNVLGTQVLLEESRKHWNA---G 124 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFLQISTDEVYGSL + G F+E+ P P+SPYSA+KA +D LV A+ T+G+P L Sbjct: 125 EVGDFRFLQISTDEVYGSLGESGFFTEETPLAPNSPYSASKAGADLLVRAYHETFGLPTL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGP+HFPEKLIPL I +IE + +YGDG+NVRDWL+V DH RA+ +VLK Sbjct: 185 NTRCSNNYGPFHFPEKLIPLLIHNIIERRPLPVYGDGRNVRDWLHVSDHARAVEVVLKGA 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 G YNIGGNNE NI IV + L+D + + + LI +++DRPGHDRRYAID+S Sbjct: 245 EPGAVYNIGGNNEWFNIAIVNLVCDLMDQRLGRGSGESRGLISYVKDRPGHDRRYAIDAS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++K ++GW P E G+ +TV WYL N W Sbjct: 305 RLKRDLGWEPAYTFERGIAETVDWYLANQEW 335 >gi|170757117|ref|YP_001782317.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B1 str. Okra] gi|169122329|gb|ACA46165.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B1 str. Okra] Length = 351 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 169/329 (51%), Positives = 228/329 (69%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y+++ K I+++ +DKLTYAGNL +LKE+ + +SF+ DICDR Sbjct: 5 LVTGGAGFIGSNFILYMLDKYKNIKIINLDKLTYAGNLENLKEVESNINYSFVNGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + KE D +VNFAAESHVDRSI + F TN++GT LL ++ W Sbjct: 65 ELVERVFKENNIDYVVNFAAESHVDRSIKDPEIFAKTNVLGTVNLLNVAKISWQTEEAWV 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +++ +FLQ+STDEVYGSL D G F ED P +P SPYS++KAS D +V A+ TY +PV + Sbjct: 125 ENK-KFLQVSTDEVYGSLGDTGYFMEDTPLDPHSPYSSSKASGDLMVKAYFDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I + + + +YGDG NVRDWLYVEDH +A+ +V+ KG Sbjct: 184 TRCSNNYGPYQFPEKLIPLIINNCLNNNPIPIYGDGLNVRDWLYVEDHCKAIDMVINKGS 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIGG+NE+ NI IV I ++ + K+ + +LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNIGGHNEKTNIFIVKAIIEYINENVDKTVTE-KLIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K ++GW P+ E G+ KT+ WYL N W Sbjct: 303 KEDLGWEPKTKFEDGIIKTIEWYLSNKDW 331 >gi|332653132|ref|ZP_08418877.1| dTDP-glucose 4,6-dehydratase [Ruminococcaceae bacterium D16] gi|332518278|gb|EGJ47881.1| dTDP-glucose 4,6-dehydratase [Ruminococcaceae bacterium D16] Length = 327 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 228/343 (66%), Gaps = 21/343 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS Y L + +V+ +DKLTYAGNL +L + F F++ DI Sbjct: 1 MTLLVTGGAGFIGSNFIFYWLKQHPEDRVVCLDKLTYAGNLATLVPVMDHPNFRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR ++ +E QP A++NFAAESHVDRSI + F+ TN++GT +LL+ R Sbjct: 61 CDRAAVKRIFEEEQPQAVINFAAESHVDRSIQAPEVFLQTNVLGTQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF Q+STDEVYG LD+ LF+E+ P PSSPYSA+KA +D L LA+ TY Sbjct: 114 --AHGGVRFHQVSTDEVYGDLPLDRPDLLFTEENPLRPSSPYSASKAGADLLTLAYCRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIP I R + G + +YG G+NVRDWL+V+DH AL Sbjct: 172 GLPVTVSRCSNNYGPYQFPEKLIPRMIVRALAGKTLPVYGRGENVRDWLHVDDHCAALDA 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L++G GE YNIGG +ER N++IV I LD + P+ H + DR GHD+RYA Sbjct: 232 ILQRGVAGEVYNIGGRSERTNLEIVGLICRRLD-VPPEQVVH------VADRKGHDKRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 IDS K+ S++GW PQ + + G+++T+ WYLD+ +WW PL +++ Sbjct: 285 IDSGKLSSQLGWQPQVSFDQGMDETINWYLDHRYWWEPLAEDV 327 >gi|304405207|ref|ZP_07386867.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] gi|304346086|gb|EFM11920.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] Length = 339 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/336 (50%), Positives = 226/336 (67%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS RY++ V+ +D LTYAGNL +LK++ + + F++ DI Sbjct: 1 MNLLVTGGAGFIGSNFVRYMLEAHSDYNVVNLDSLTYAGNLENLKDVEHNERYHFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L E + D +VNFAAESHVDRSI F+ TN+IGT +LL+ R Sbjct: 61 ADAALVTRLLDEHEIDVLVNFAAESHVDRSITDPGVFVRTNVIGTQVLLDAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +++QISTDEVYGSL + G F+E+ P P+SPYSA+KA +D LV A+ TYG+ Sbjct: 114 --TKGISKYVQISTDEVYGSLGETGYFTEETPLAPNSPYSASKAGADLLVKAYHETYGMN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPYHFPEKLIPL IT ++G + +YGDG NVRDWL+V+DH RA+ LV+ Sbjct: 172 VNITRCSNNYGPYHFPEKLIPLMITNALDGLPLPVYGDGLNVRDWLHVQDHARAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YNIGG+NER NI+IV L+ A + KS + I+++ DR GHDRRYAID Sbjct: 232 KGKAGEVYNIGGHNERTNIEIV----KLILAKLGKS---EDQIKYVTDRLGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+ ++GW P +G+ +T+ WYL N WWR + Sbjct: 285 TKLTEQLGWKPDYTFATGIAETIEWYLANESWWRSM 320 >gi|332883516|gb|EGK03799.1| dTDP-glucose 4,6-dehydratase [Dysgonomonas mossii DSM 22836] Length = 378 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 165/358 (46%), Positives = 227/358 (63%), Gaps = 28/358 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++TGGAGFIGS R L + ++++ D LTYAGNL +L E + + +F++ DI Sbjct: 1 MTYLITGGAGFIGSNFVKRMLATHSEAKLVIFDALTYAGNLGTLAEELKDSRVTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+ + Q D +VNFAAESHVDRSI F+ NI+GT LL+ R +W+ Sbjct: 61 CDKNITEKVFSDHQIDYVVNFAAESHVDRSIENPQLFLQVNILGTQNLLDTARKFWTVGK 120 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + ++ +FLQ+STDEVYGSL ++G F+E+ P +P SPYSA K D +V A+G Sbjct: 121 DENNYPIWREGVKFLQVSTDEVYGSLGEEGYFTEETPLDPRSPYSAAKTGGDLIVKAYGE 180 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P+ ++ CSNNYGP+HFPEKLIPL I ++ G + +YGDG NVRDWLYV+DH +A+ Sbjct: 181 TYKMPINITRCSNNYGPFHFPEKLIPLIIRNILAGQQLPVYGDGSNVRDWLYVDDHCKAI 240 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEI---------------------GFLLDALIP 272 +VL KGR+GE YNIGG+NERKNI+IV + D I Sbjct: 241 DIVLHKGRLGEVYNIGGHNERKNIEIVKLVIKTIHDIMEKEPKYRDVLKKKEIAADGSID 300 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+ + LI F++DR GHD+RYAID +KI +E+GW P+ + G+ KT+ WYLDN W Sbjct: 301 ISWINDNLISFVKDRQGHDQRYAIDPAKISNELGWLPETTFDKGIVKTIYWYLDNQAW 358 >gi|78223676|ref|YP_385423.1| dTDP-glucose 4,6-dehydratase [Geobacter metallireducens GS-15] gi|78194931|gb|ABB32698.1| dTDP-glucose 4,6-dehydratase [Geobacter metallireducens GS-15] Length = 358 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 230/332 (69%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + ++ + +V+ +D LTYAGNL +L + ++ + F++ DIC+ Sbjct: 10 ILVTGGAGFIGSNFITHFMAANPGCRVVNLDILTYAGNLKNLVGVEKNPDYRFVRGDICN 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R L E + +A+V+FAAESHVDRSI G + F+ TN++GT +LLEE+R W + Sbjct: 70 GELVRELLAEERIEAVVHFAAESHVDRSITGPEIFVRTNVLGTQVLLEESRRHWEAKGVE 129 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYG+L + G F+E+ P P+SPYSA+KA SD +V A+ TYG P L Sbjct: 130 R---FRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLIVRAYYETYGFPAL 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I ++ + +YGDG+NVRDWL+V+DH A+ VLK G Sbjct: 187 ITRCSNNYGPYQFPEKLIPLMIHNIVANKPLPVYGDGRNVRDWLHVKDHSSAIETVLKGG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYAIDS 298 + GE +N+GGNNE NIDIV + LLD + PK S LI F++DR GHDRRYAI + Sbjct: 247 KPGEVFNVGGNNEWFNIDIVQLLCDLLDERLGRPKGESRG-LITFVKDRLGHDRRYAISA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KIK E+GW P E G+ +TV WYL N W Sbjct: 306 AKIKRELGWEPSYTFERGIAETVDWYLANGAW 337 >gi|310657749|ref|YP_003935470.1| dTDP-glucose 4,6 dehydratase [Clostridium sticklandii DSM 519] gi|308824527|emb|CBH20565.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Clostridium sticklandii] Length = 349 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 169/336 (50%), Positives = 225/336 (66%), Gaps = 13/336 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTGGAGFIGS +Y++ +++ +D LTYAGNL +L++I + ++ DIC Sbjct: 1 MNLLVTGGAGFIGSNFIKYMLKHHDYRIVNLDLLTYAGNLENLEDIEGDARYKHIKGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + S + F D +VNFAAESHVDRSI + F+ TNI+GT LL+ + +W Sbjct: 61 NRELVESIFRRFDIDMVVNFAAESHVDRSIEDPEVFLRTNIMGTQALLDIAKDFWKIDLF 120 Query: 121 DK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 DK K +F+Q+STDEVYGSL + GLF E NP+SPYSA+KAS+D +V A+ T Sbjct: 121 DKYCKEYKKGVKFVQVSTDEVYGSLGETGLFKETTCLNPNSPYSASKASADMIVRAYSET 180 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV ++ CSNNYGPY FPEKLIPL I I + +YGDG+ VRDWLYVEDH A+ Sbjct: 181 YGLPVNITRCSNNYGPYQFPEKLIPLMINNAINDKPLPVYGDGKQVRDWLYVEDHCSAID 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 VL KG +GE YNIGGNNE++N+DIV +L+ L LI ++DR GHDRRY Sbjct: 241 SVLHKGMLGEVYNIGGNNEKQNLDIV---KLILNVLGKDE----TLITHVKDRLGHDRRY 293 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID++KI +E+GW P+ + G+ T+ WYLDN W Sbjct: 294 AIDNTKISTELGWEPKYTFDEGIKLTIKWYLDNPRW 329 >gi|227824672|ref|ZP_03989504.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus sp. D21] gi|226905171|gb|EEH91089.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus sp. D21] Length = 342 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 181/353 (51%), Positives = 238/353 (67%), Gaps = 28/353 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS +++ + + ++ +DKLTYAGNL++L I + F F++ DI Sbjct: 1 MKIIVTGGAGFIGSNFIFHMLKSHPEDYIICLDKLTYAGNLSTLAPIMDNAHFRFVRADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ + + +E P+ +VNFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 61 CDRKAVDALFEEEHPNMVVNFAAESHVDRSIENPQLFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYS++KAS+D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEATPIHTSSPYSSSKASADLLVLAYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YGDGQNVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIINALHDKPLPVYGDGQNVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 +L+KGR+GE YN+GG+NE KNIDIV LI K+ E LI F++DR GHDRRY Sbjct: 232 ILQKGRVGEVYNVGGHNEMKNIDIV--------KLICKALGKPESLIHFVKDRKGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 AID +KI E+GW P+ G+ KT+ WYLDN WW+P+ + DY K+ Sbjct: 284 AIDPAKIHRELGWLPETKFADGIQKTIQWYLDNEEWWQPIV-----NGDYVKY 331 >gi|148260217|ref|YP_001234344.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] gi|146401898|gb|ABQ30425.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] Length = 351 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 220/335 (65%), Gaps = 3/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGG GFIGSA+ R LV +V+ +DK+TYA + ++L ++ DI Sbjct: 1 MRFLITGGCGFIGSAVVRRLVASTPHEVVTVDKMTYAASEDALGAALGHPRHRLIRADIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+ + +PD +++ AAESHVDRSI G +FI TNI GTF+LLE R W++ L + Sbjct: 61 DAAAMRAVFEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +FRF ISTDEV+G+L++G F+E PY+P SPY+A+KA+SD+LV AW HTYG+P Sbjct: 121 PARRRFRFHHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SN +NNYGP+ FPEKLIPL + +EG + +YGDG N+RDWL+VEDH AL + Sbjct: 181 AIVSNTTNNYGPWQFPEKLIPLVLINALEGRPLPVYGDGSNLRDWLFVEDHAEALLAIAL 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 G GE Y IG R N+D+V I LLDA P E LI F+ DRPGHD RY ID Sbjct: 241 TGTPGETYAIGARQPRSNLDVVRAICRLLDARRPDPAGPRERLITFVADRPGHDFRYEID 300 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ ++ + W + E+GL +TV WYL N WWR Sbjct: 301 PARSEAALAWRAAHDFEAGLARTVDWYLANEPWWR 335 >gi|254517911|ref|ZP_05129967.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. 7_2_43FAA] gi|226911660|gb|EEH96861.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. 7_2_43FAA] Length = 349 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 165/329 (50%), Positives = 222/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ K I+++ +DKLTYAGNL +LK I + F+Q DICD Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYKDIRIINLDKLTYAGNLENLKSIEGDSRHIFVQGDICDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D +V+FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVLSLFEKYEIDYVVHFAAESHVDRSIKEPEVFAKTNVLGTVNLLSCAKNAWETEDGWR 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +FL +STDEVYGSL + G F E P +P SPYSA+KA SD +V A+G TY +P+ + Sbjct: 125 KG-VKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSASKAGSDMMVKAYGDTYKMPINI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I ++ + +YGDG N+RDWLYVEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLQLKDLPIYGDGLNIRDWLYVEDHAKAIDMVINNGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 IGE YN+GG+NER NI IV + ++ + + L +F+EDR GHDRRY ID SKI Sbjct: 244 IGEIYNVGGHNERTNIQIVDTVINYINENVDSKVTEN-LKKFVEDRKGHDRRYGIDPSKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIVKTIKWYLDNKEW 331 >gi|255657910|ref|ZP_05403319.1| dTDP-glucose 4,6-dehydratase [Mitsuokella multacida DSM 20544] gi|260850102|gb|EEX70109.1| dTDP-glucose 4,6-dehydratase [Mitsuokella multacida DSM 20544] Length = 347 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 169/336 (50%), Positives = 223/336 (66%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS Y++ +++ +DKLTYAGNL +L+ + F F++ DI Sbjct: 1 MNIIVTGGAGFIGSNFIYYMLKKHPSDRIICVDKLTYAGNLETLESAMEKKNFKFIRADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ +PD +VNFAAESHVDRSI + F+ TN+IGT +LL+ R Sbjct: 61 ADRRAVYRIFEQEKPDIVVNFAAESHVDRSIENPEIFLQTNVIGTSVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ SSPYSA+KA +D LV+A+ TY Sbjct: 114 --KYGIDRYHQVSTDEVYGDLPLDRPDLFFTEETNLKTSSPYSASKAGADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP +S CSNNYGPYHFPEKLIPL I + + +YGDG+NVRDWLYVEDH A+ L Sbjct: 172 KIPTTISRCSNNYGPYHFPEKLIPLMIINALSDKKLPVYGDGKNVRDWLYVEDHCHAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KGR+GE YNIGG+NER NID+V I L + P+ +LI ++ DR GHDRRYA Sbjct: 232 ILQKGRVGEVYNIGGHNERANIDVVKTI--LKELGKPE-----DLIEYVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI +E+GW P+ E G+ KTV WYL++ WW Sbjct: 285 IDPTKIHTELGWEPETKFEDGIKKTVKWYLEHRDWW 320 >gi|251798954|ref|YP_003013685.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. JDR-2] gi|247546580|gb|ACT03599.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. JDR-2] Length = 339 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/332 (50%), Positives = 230/332 (69%), Gaps = 19/332 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS Y+++ + + +D LTYAGN +L+++ ++F++ DI Sbjct: 1 MKLLITGGAGFIGSNFVHYMMSRYPDYEFINVDALTYAGNPENLRQVENHPHYTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + L E DA++NFAAESHVDRSIL F+ TNI+GT LL+ LS Sbjct: 61 ADQAAL-TPLFESGIDAVINFAAESHVDRSILQPGLFVHTNIVGTQTLLD--------LS 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + R++Q+STDEVYG+L GLF+E+ P P+SPYSA+KA +D LV A+ TYG+P Sbjct: 112 KTHQVK-RYVQVSTDEVYGTLGAAGLFTENTPLAPNSPYSASKAGADLLVRAYHETYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++ CSNNYGPY FPEKLIPL I ++ + +YGDG +RDWLYVEDH +A+ LVL Sbjct: 171 AVITRCSNNYGPYQFPEKLIPLMILNALQDKPLPVYGDGLQIRDWLYVEDHCKAIDLVLH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE YN+GG+NER N+ +V I L + P+S LIR +EDRPGHDRRYAID+ Sbjct: 231 QGRIGEVYNVGGSNERTNLHVVRTI--LQELGKPES-----LIRHVEDRPGHDRRYAIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIKSE+GW P+ + E+G+ T+ WYL N W Sbjct: 284 DKIKSELGWTPEHSFENGIKSTIEWYLHNEEW 315 >gi|253699535|ref|YP_003020724.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. M21] gi|251774385|gb|ACT16966.1| dTDP-glucose 4,6-dehydratase [Geobacter sp. M21] Length = 355 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 167/331 (50%), Positives = 225/331 (67%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS ++ + +V+ +D LTYAGNL +L + + + F++ DICD Sbjct: 10 LLVTGGAGFIGSNFINHFMAGNPGCRVINLDLLTYAGNLKNLAAVEGNPAYRFVKGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + DA+V+FAAESHVDRSI G D F+ TN++GT LLE +RL + Sbjct: 70 AGLVAGLLAEEKVDAVVHFAAESHVDRSITGPDIFVRTNVLGTQTLLEASRL-----HAE 124 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFLQ+STDEVYGSL +G F+E+ P P+SPYSA+KA +D LV A+ T+G+ L Sbjct: 125 RVAGFRFLQVSTDEVYGSLGAQGYFTEETPLAPNSPYSASKAGADLLVRAYSETFGLATL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGPYHFPEKLIPL I +++ + +YGDG NVRDWL+V+DH A+ VLKK Sbjct: 185 NTRCSNNYGPYHFPEKLIPLMIHNILKKKPLPVYGDGLNVRDWLHVKDHSAAIERVLKKA 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + GE +N+GGNNE KNIDIV + L+D + + + LI F++DR GHDRRYAID+S Sbjct: 245 KPGEIFNVGGNNEWKNIDIVNLVCDLMDQRLGRRPGESRGLIAFVQDRKGHDRRYAIDAS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K E+ W P E G+ +T+ WYL N W Sbjct: 305 KLKRELSWEPSYTFERGIAETIDWYLANQGW 335 >gi|325279644|ref|YP_004252186.1| dTDP-glucose 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] gi|324311453|gb|ADY32006.1| dTDP-glucose 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] Length = 349 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 164/332 (49%), Positives = 226/332 (68%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS L R +VN + +++ +DKLTYAGNL +LK+I + + F + DICD Sbjct: 4 ILITGGAGFIGSHLVRLMVNKYPEYRIINLDKLTYAGNLANLKDIEKKPNYVFEKADICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I++ +++Q D +++ AAESHVDRSI F TN++GT +L+ +L W D Sbjct: 64 FPAIQAIFEKYQVDGVIHLAAESHVDRSIKDPFSFAQTNVMGTLSMLQAAKLAWEGHFDD 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F +STDEVYG+L G LF+E Y+P SPYSA+KASSD+ V A+ TYG+PV Sbjct: 124 K----LFYHVSTDEVYGALQPGKELFTEKTKYDPHSPYSASKASSDHFVRAYHDTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYG Y FPEKLIPL I + + +YG G+NVRDWL+VEDH RA+ L+ K Sbjct: 180 KISNCSNNYGSYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLFVEDHARAIDLIFHK 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G++G+ YNIGG NE KNID++ + + D L+ + ++ LI ++ DR GHD RYAIDS Sbjct: 240 GKVGDTYNIGGFNEWKNIDLIKVLIKVTDRLLGRPEGASDHLITYVTDRAGHDLRYAIDS 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K+E+GW P E G+ KTV WYL+N W Sbjct: 300 TKLKNELGWEPSLQFEEGIEKTVKWYLENQEW 331 >gi|312877746|ref|ZP_07737698.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor lactoaceticus 6A] gi|311795465|gb|EFR11842.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor lactoaceticus 6A] Length = 352 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 172/334 (51%), Positives = 230/334 (68%), Gaps = 6/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQV 57 M L+VTG AGFIGS Y ++ + +++ +DKLTYAGNL +L +++ Q F F++ Sbjct: 1 MNLLVTGCAGFIGSNFVYYYLDKYIDRKIIGLDKLTYAGNLENLAKLTPEQKKRFVFIKG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI +RE I +E++ D +VNFAAESHVDRSI+ FI TN++GT LL+ + +W Sbjct: 61 DITNRELIEHIFEEYEIDVVVNFAAESHVDRSIIDPHIFIKTNVLGTQTLLDVAKNFWYK 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + D RF+QISTDEVYGSL + G F+E P +P SPYSA+KA++D +V A+ TY Sbjct: 121 -NGKWTDGKRFIQISTDEVYGSLGETGYFTEKTPLDPHSPYSASKAAADLIVKAYFDTYK 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ LV Sbjct: 180 MPVNITRCSNNYGPYQFPEKLIPLVINNCLNKKPIPVYGDGLNIRDWLYVEDHCKAIDLV 239 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG IGE YNIGG+NER N++IV I L ++ S ELIRF++DR GHDRRYAI Sbjct: 240 IEKGGIGEIYNIGGHNERTNLEIVKMIINYLKNNFDETISE-ELIRFVKDRKGHDRRYAI 298 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D SKI E+GW P+ E G+ KT+ WYL+N W Sbjct: 299 DPSKIMRELGWVPETKFEDGIVKTINWYLNNRDW 332 >gi|222099007|ref|YP_002533575.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] gi|221571397|gb|ACM22209.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] Length = 342 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 170/339 (50%), Positives = 227/339 (66%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y++ +++ +DKLTYAGNL +L+ F F++ DI Sbjct: 1 MKILVTGGAGFIGSNFIHYMMEKHPDYRIICLDKLTYAGNLRNLESALNRENFRFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDRELVYKVFEEERPDIVVNFAAESHVDRSIEDPEIFLKTNIIGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F+E P PSSPYSA+KAS+D LV+A+ TY Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLKFTEKSPLKPSSPYSASKASADLLVMAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I I + +YGDG+NVRDW++V+DH A+ L Sbjct: 172 ELPVTISRCSNNYGPYQFPEKLIPLMIINAIHDRPLPVYGDGRNVRDWIHVKDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +G+ GE YNIGG NER NI++V I L + P+S LI+F++DRPGHDRRYA Sbjct: 232 IIHEGKEGEIYNIGGENERSNIEVVKMI--LKELGKPES-----LIKFVKDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +K+K E GW P+ + E GL T+ WYL+N WW + Sbjct: 285 LDITKMKEEFGWSPKISFEEGLRSTIKWYLENRNWWEEI 323 >gi|299146223|ref|ZP_07039291.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_23] gi|298516714|gb|EFI40595.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_23] Length = 354 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 168/332 (50%), Positives = 221/332 (66%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIEGQPNYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I K++ D++++ AAESHVDRSI F TN++GT LL+ +L W S+ Sbjct: 65 FERIIQLFKQYNIDSVIHLAAESHVDRSIKDPFIFAQTNVMGTLSLLQAAKLAWET-SET 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D F ISTDEVYG+LD F+E Y P SPYSA+KA SD+ V A+ TYG+PV Sbjct: 124 GYDHKLFYHISTDEVYGALDFDGTFFTEQTKYQPHSPYSASKAGSDHFVRAFHDTYGMPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DHVRA+ + K Sbjct: 184 IVTNCSNNYGPYQFPEKLIPLFINNIRHGKALPVYGKGENVRDWLYVVDHVRAIDTIFHK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+I E YNIGG NE NID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 244 GKIAETYNIGGFNEWTNIDLIKVIIKTVDRLLGNPDGTSEKLITYVADRKGHDLRYAIDS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E G+ KTV WYL+NN W Sbjct: 304 NKLKKELGWEPSLQFEEGIEKTVRWYLENNEW 335 >gi|257054675|ref|YP_003132507.1| dTDP-glucose 4,6-dehydratase [Saccharomonospora viridis DSM 43017] gi|256584547|gb|ACU95680.1| dTDP-glucose 4,6-dehydratase [Saccharomonospora viridis DSM 43017] Length = 330 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 230/339 (67%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R ++ +V+V+DKLTYAGN ++L ++ S F F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRQALSGAYDSLRDAEVIVLDKLTYAGNRSNLDPVADSPRFRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICD +R + D +V+FAAESHVDRSI+G+ +F+ TN++GT LL+ Sbjct: 61 QGDICDSALVREVMTGV--DLVVHFAAESHVDRSIVGSADFVLTNVLGTQTLLQA----- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +C ++ K F+ +STDEVYGS+D+G + ED P P+SPYSA+KASSD + ++ TY Sbjct: 114 ACDAEVGK----FVHVSTDEVYGSIDEGSWPEDHPLEPNSPYSASKASSDLIARSFHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEK+IPL IT +++G V LYGDG NVRDWL+V+DH R + L Sbjct: 170 GLPVCITRCSNNYGPYQFPEKVIPLFITNLLDGKRVPLYGDGLNVRDWLHVDDHCRGVQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +GR GE YNIGG E N D+ LLDA+ + E++ +EDR GHDRRY+ Sbjct: 230 VADRGRPGEIYNIGGGTELTNRDLTKR---LLDAV----GADWEMVEQVEDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI +E+G+ P+ + E+GL +TV WY +N WW PL Sbjct: 283 VDITKISTELGYRPEVDFETGLAETVRWYTENRQWWEPL 321 >gi|328948421|ref|YP_004365758.1| dTDP-glucose 4,6-dehydratase [Treponema succinifaciens DSM 2489] gi|328448745|gb|AEB14461.1| dTDP-glucose 4,6-dehydratase [Treponema succinifaciens DSM 2489] Length = 371 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 178/369 (48%), Positives = 242/369 (65%), Gaps = 22/369 (5%) Query: 3 LIVTGGAGFIGSALCRYLVN------------DLKIQVLVIDKLTYAGNLNSLKEISQ-- 48 ++VTGGAGFIGS YL D V+ +D LTYAGNL SLK++ + Sbjct: 7 ILVTGGAGFIGSNFIHYLFGLSSANGNLFNDADFSGNVVNVDCLTYAGNLESLKDVEEKF 66 Query: 49 -SNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 + F +VDIC+R I LK++ D I++FAAESHVDRSILG + FI TN++GTF L Sbjct: 67 GGKRYFFEKVDICNRPEIERILKQYDIDTIIHFAAESHVDRSILGPETFIKTNVMGTFTL 126 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDY 166 L+ R +W +D F ISTDEVYGSL + G F+E PY+P SPYS++KASSD+ Sbjct: 127 LDAARSFWKKPDGTFRDDVLFHHISTDEVYGSLGETGYFTETTPYDPRSPYSSSKASSDH 186 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + +A+ HTYG+P+ LSNC+NNYGPY FPEKL+PL I+ + +G + +YG G N+RDW+YV Sbjct: 187 IAMAYFHTYGLPLTLSNCTNNYGPYQFPEKLLPLMISNIRDGKPLPVYGKGDNIRDWIYV 246 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIE 285 EDH RA++L++ KGR G++YNIGG NE +NI ++ ++ L + K S E I +++ Sbjct: 247 EDHNRAVWLIVNKGRTGQKYNIGGENEWQNIKLLHKVIELSAEKLGKPASEIEKTITYVK 306 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYS 345 DRPGHD+RYAID +KIK+E+GW + E GLN TV WYL N W + +Y+ Sbjct: 307 DRPGHDKRYAIDCTKIKTELGWQRKMTFEEGLNATVDWYLKNTEWVNHILS-----GEYT 361 Query: 346 KWKNLNEMS 354 KW + N S Sbjct: 362 KWIDANYKS 370 >gi|293401740|ref|ZP_06645881.1| dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304692|gb|EFE45940.1| dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 352 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 161/329 (48%), Positives = 216/329 (65%), Gaps = 3/329 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS YL+N I+++ +DKLTYAGNL +LK+I + F+Q DICD Sbjct: 5 LVTGGAGFIGSNFVYYLLNKYDDIKIINVDKLTYAGNLENLKQIEEDERHIFVQADICDE 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + + D +VNFAAESHVDRSIL + F+ TN+ GT LL+ + +W Sbjct: 65 AKITQLFETYDIDYVVNFAAESHVDRSILHPEIFVETNVNGTVNLLKIAKKYWEIGDDTY 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 KD ++LQ+STDEVYGSL D+G F+E+ P P SPYSA+KAS+D V A+ TY P+ + Sbjct: 125 KDGVKYLQVSTDEVYGSLGDEGYFTEETPICPHSPYSASKASADLFVKAFADTYKFPINI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL +E ++ +YGDG N+RDWLYVEDH + + +V+ GR Sbjct: 185 TRCSNNYGPYQFPEKLIPLVFNNTLEHKNLPVYGDGMNIRDWLYVEDHCKGIDMVINSGR 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIGG+NER NI IV I + I + +I ++ DR GHD+RY ID KI Sbjct: 245 LGEVYNIGGHNERTNIFIVKTIINYVKEHIDATVGE-HMITYVTDRKGHDKRYGIDPHKI 303 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 E+GW+P+ E G+ T+ WY ++ W Sbjct: 304 SEELGWYPETKFEDGIKLTLAWYNEHKEW 332 >gi|89889754|ref|ZP_01201265.1| dTDP-glucose 4, 6-dehydratase [Flavobacteria bacterium BBFL7] gi|89518027|gb|EAS20683.1| dTDP-glucose 4, 6-dehydratase [Flavobacteria bacterium BBFL7] Length = 338 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 168/332 (50%), Positives = 219/332 (65%), Gaps = 9/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS L YL+N+ + +DKLTYA +L+ L +F++ DICD Sbjct: 3 KILVTGGAGFIGSNLIEYLLNNTSDHIYNLDKLTYAADLDFAHNYHHDRL-TFIKGDICD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET-RLWWSCLSQ 120 I+ +E Q D + + AAESHVD SI FI TN+ GTF LL LW Sbjct: 62 TAFIQHLFQEHQFDKVYHLAAESHVDNSIENPQVFIETNVNGTFNLLHAAYHLWMEQPRV 121 Query: 121 DKKD----QFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K D Q RFL ISTDEVYGSL D G F+E PY PSSPYSA+KASSD+LV+++ HTY Sbjct: 122 FKPDFKTMQPRFLHISTDEVYGSLEDDGFFTEKTPYAPSSPYSASKASSDHLVMSYVHTY 181 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++NCSNNYGP EKLIP+ I + + G + +YGDG+NVRDWLYV DH +AL+ Sbjct: 182 GLPAVITNCSNNYGPRQHDEKLIPVVIRKALSGEPIPIYGDGRNVRDWLYVTDHCQALHT 241 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRR 293 VL+ IGE YN+GG NE +NIDI I +LD ++P+ + I +++DRPGHD R Sbjct: 242 VLENASIGENYNVGGKNEIRNIDIANHICEILDTVMPRKDGQPYAAQITYVKDRPGHDYR 301 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 YAID SKI+ ++ W P E +SG+ KTV WYL Sbjct: 302 YAIDPSKIEKDLQWQPAETFKSGIKKTVEWYL 333 >gi|217958797|ref|YP_002337345.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH187] gi|229138009|ref|ZP_04266607.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST26] gi|217068197|gb|ACJ82447.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH187] gi|228645354|gb|EEL01588.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST26] Length = 322 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 223/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ +D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINLDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPLPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYHLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH RA+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCRAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|325286257|ref|YP_004262047.1| dTDP-glucose 4,6-dehydratase [Cellulophaga lytica DSM 7489] gi|324321711|gb|ADY29176.1| dTDP-glucose 4,6-dehydratase [Cellulophaga lytica DSM 7489] Length = 347 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 220/333 (66%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R V K + +D LTYAGNL +L +I S+ ++FL+ DI Sbjct: 1 MHILITGGAGFIGSHVVRRFVKSYPKYHIYNVDALTYAGNLENLSDIEDSSNYTFLKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I+ K++ D +++ AAESHVDRSI F+ TN+IGT LL +W Sbjct: 61 TDENFIQDIFKKYNFDGVIHLAAESHVDRSITDPMAFVKTNVIGTVNLLNAASDFWKNDL 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RF ISTDEVYG+L + GLF+E Y+P+SPYSA+KASSD+ V A+G TY +P Sbjct: 121 ESK----RFYHISTDEVYGALGESGLFTETRAYDPNSPYSASKASSDHFVRAYGETYKLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP HFPEKLIPL I +I + +YGDG RDWLYV DH RA+ LV Sbjct: 177 YVITNCSNNYGPNHFPEKLIPLFINNIIHKKALPVYGDGNYTRDWLYVIDHARAIDLVFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG+ E YNIGG NE KNID+V + L+DA + + +E LI +++DRPGHD RYAID Sbjct: 237 KGKNAETYNIGGFNEWKNIDLVKLLCSLMDAKLNRPLGDSEKLITYVKDRPGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKI E+GW P + GL KT+ WYL N W Sbjct: 297 ASKINKELGWEPSVTFKEGLEKTIDWYLQNEEW 329 >gi|260887356|ref|ZP_05898619.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|330838668|ref|YP_004413248.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|260862894|gb|EEX77394.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|329746432|gb|AEB99788.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] Length = 335 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 175/338 (51%), Positives = 231/338 (68%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+ +VTGGAGFIGS Y++ + ++L +D LTYAG+ SL +++ + F F +I Sbjct: 1 MKYLVTGGAGFIGSNFVHYMMKAHEDAEILCVDALTYAGDYESLLDLADAPRFRFAHCNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE I + + QPD +VNFAAESHVDRSI + F+ TNIIGT +L++ R + Sbjct: 61 CDREAIYALFRAEQPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSVLMDACREYGIS-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LVLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLLVLAYSRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + + +YGDG NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIVKALADEQLPVYGDGANVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRY 294 VL+KGR GE YNIGG+NER NID+V +L AL P+S LI ++ DR GHDRRY Sbjct: 232 VLQKGRTGEVYNIGGHNERANIDVV---KVILRALKKPES-----LISYVADRKGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID +KI +E+GW P+ E G+ +T+ WYL+N WW+ Sbjct: 284 AIDPTKIHTELGWLPETRFEDGIERTIAWYLENRAWWQ 321 >gi|222528109|ref|YP_002571991.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor bescii DSM 6725] gi|222454956|gb|ACM59218.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor bescii DSM 6725] Length = 318 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 164/324 (50%), Positives = 220/324 (67%), Gaps = 19/324 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS +Y+++ + +++ D LTYAGNL +LKE+ ++F++ DI DR Sbjct: 4 ILVAGGAGFIGSNFVKYMISKEEYKIINYDALTYAGNLENLKEVENHPYYTFIKGDIVDR 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K +Q D ++NFAAESHVDRSI D F+ TN++GT +LL+ +R + Sbjct: 64 SKVEEVFKNYQIDYVINFAAESHVDRSIKDPDIFVKTNVLGTQVLLDVSRKFGIK----- 118 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +F+QISTDEVYGSL +G F+E+ P P+SPYSA+KA +D LV A+ TYG+PV + Sbjct: 119 ----KFIQISTDEVYGSLGPEGYFTEESPLAPNSPYSASKAGADMLVRAYFKTYGLPVNI 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNN+GP+ PEK IP I ++ + +YGDGQN+RDWLYVEDH RA+ LVLKKGR Sbjct: 175 TRCSNNFGPHQHPEKFIPTVILNALQNKPIPIYGDGQNIRDWLYVEDHCRAIELVLKKGR 234 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSK 300 IGE YNIGGNNE +NIDI LI K E LI+F+ DRPGHDRRYAIDSSK Sbjct: 235 IGEVYNIGGNNEWRNIDIA--------KLILKLLGKPENLIQFVADRPGHDRRYAIDSSK 286 Query: 301 IKSEIGWFPQENMESGLNKTVCWY 324 I+ E+GW + + + KT+ WY Sbjct: 287 IQKELGWKVEYKFDEAIRKTIEWY 310 >gi|162149148|ref|YP_001603609.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|161787725|emb|CAP57321.1| putative dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 341 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 209/322 (64%), Gaps = 3/322 (0%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R+++ V+ +D LTYA L S EIS + ++ DI D +R+ QPD Sbjct: 1 MVRHIIGGTGHSVVNVDSLTYAATLESTAEISSDPRYVHVRADITDGAAMRAVFAAHQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 A+++ AAESHVDRSI G F+ TN++GT+ LL+ R +WS L + FRF +STDE Sbjct: 61 AVMHLAAESHVDRSIDGPGVFVQTNVVGTYTLLDTAREYWSGLDAAGRAAFRFHHVSTDE 120 Query: 136 VYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 V+G+L G F+E PY+P SPYSA+KA+SD+LV AW HTYG+P ++N +NNYG +HF Sbjct: 121 VFGTLQPGDAPFTESTPYDPRSPYSASKAASDHLVRAWQHTYGLPTFVTNTTNNYGFWHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL I G + +YGDG N+RDWL+V+DH AL L +++G+ GE Y IG Sbjct: 181 PEKLIPLVTINAIGGRALPVYGDGANMRDWLFVDDHAEALVLAVERGQPGETYAIGARQP 240 Query: 254 RKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R N+D+V I +LD L P + H LIRF+ DRPGHD RY ID S+ ++ +GW + + Sbjct: 241 RSNLDVVRAICTVLDDLRPDPAGPHARLIRFVTDRPGHDFRYEIDPSRAEAALGWRARHD 300 Query: 313 MESGLNKTVCWYLDNNWWWRPL 334 E+G+ +TV WYLD+ WW L Sbjct: 301 FETGIRRTVQWYLDHQDWWTAL 322 >gi|325970220|ref|YP_004246411.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] gi|324025458|gb|ADY12217.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] Length = 353 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 214/329 (65%), Gaps = 3/329 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS YL+ + I ++ +DKLTYAGNL +LK + F+Q DICD Sbjct: 6 LVTGGAGFIGSNFIHYLLKKHQDILIVNVDKLTYAGNLENLKSVMNDKRHVFVQADICDA 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ + + D +VNFAAESHVDRSI D F+ TN++GT LL + W+ Sbjct: 66 QAMQKLFELYTIDYVVNFAAESHVDRSITDPDVFVRTNVMGTLNLLNIAKANWTMGDDAY 125 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ +F Q+STDEVYGSL +G F+E P +P SPYSA+K S+D V A+ TY +PV + Sbjct: 126 REGVKFQQVSTDEVYGSLGPEGFFTETTPLDPHSPYSASKTSADLFVKAYADTYKLPVTI 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ LVL+KGR Sbjct: 186 TRCSNNYGPYQFPEKLIPLMINNCLNKQSLPVYGDGMQIRDWLYVEDHCKAIDLVLQKGR 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YN+GG+NE+ NI IV I + + S + LIR + DR GHDRRY ID SKI Sbjct: 246 AGEVYNVGGHNEQPNIAIVRSIIAYVGEKVDPSIDES-LIRHVTDRKGHDRRYGIDPSKI 304 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + E+GW P+ G+ KT+ WYL N W Sbjct: 305 REELGWEPETMFAEGIGKTIDWYLGNRQW 333 >gi|237719415|ref|ZP_04549896.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|293370258|ref|ZP_06616818.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] gi|229451275|gb|EEO57066.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|292634755|gb|EFF53284.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] Length = 354 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 167/332 (50%), Positives = 221/332 (66%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIEGQPNYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I K++ D++++ AAESHVDRSI F TN++GT LL+ +L W S+ Sbjct: 65 FERIIQLFKQYNIDSVIHLAAESHVDRSIKDPFIFAQTNVMGTLSLLQAAKLAWET-SET 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D F ISTDEVYG+LD F+E Y P SPYSA+KA SD+ V A+ TYG+PV Sbjct: 124 GYDHKLFYHISTDEVYGALDFDGTFFTEQTKYQPHSPYSASKAGSDHFVRAFHDTYGMPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DH RA+ ++ K Sbjct: 184 IVTNCSNNYGPYQFPEKLIPLFINNIRHGKALPVYGKGENVRDWLYVVDHARAIDIIFHK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+I E YNIGG NE NID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 244 GKIAETYNIGGFNEWTNIDLIKVIIKTVDRLLGNPDGTSEKLITYVADRKGHDLRYAIDS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E G+ KTV WYL+NN W Sbjct: 304 NKLKKELGWEPSLQFEEGIEKTVRWYLENNEW 335 >gi|326403403|ref|YP_004283484.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325050264|dbj|BAJ80602.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 356 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 220/335 (65%), Gaps = 3/335 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R ++TGG GFIGSA+ R LV +V+ +DK+TYA + ++L ++ DI Sbjct: 6 LRFLITGGCGFIGSAVVRRLVASTPHEVVTVDKMTYAASEDALGAALGHPRHRLIRADIA 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+ + +PD +++ AAESHVDRSI G +FI TNI GTF+LLE R W++ L + Sbjct: 66 DAAAMRAVFEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDE 125 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +FRF ISTDEV+G+L++G F+E PY+P SPY+A+KA+SD+LV AW HTYG+P Sbjct: 126 PARRRFRFHHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTYGLP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SN +NNYGP+ FPEKLIPL + +EG + +YGDG N+RDWL+VEDH AL + Sbjct: 186 AIVSNTTNNYGPWQFPEKLIPLVLINALEGRPLPVYGDGSNLRDWLFVEDHAEALLAIAL 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 G GE Y IG R N+D+V I LLDA P E LI F+ DRPGHD RY ID Sbjct: 246 TGTPGETYAIGARQPRSNLDVVRAICRLLDARRPDPAGPRERLITFVADRPGHDFRYEID 305 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ ++ + W + E+GL +TV WYL N WWR Sbjct: 306 PARSEAALAWRAAHDFEAGLARTVDWYLANETWWR 340 >gi|325970227|ref|YP_004246418.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] gi|324025465|gb|ADY12224.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] Length = 353 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 161/329 (48%), Positives = 215/329 (65%), Gaps = 3/329 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS YL+ + I ++ +DKLTYAGNL +LK + F+Q DICD Sbjct: 6 LVTGGAGFIGSNFIHYLLKKHQDILIVNVDKLTYAGNLENLKSVMNDKRHVFVQADICDA 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ + + D +VNFAAESHVDRSI D F+ TN++GT LL + W+ Sbjct: 66 QAMQKLFELYTIDYVVNFAAESHVDRSITDPDVFVRTNVMGTLNLLNIAKANWTMGDDAY 125 Query: 123 KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ +F Q+STDEVYGSL +G F+E P +P SPYSA+K S+D V A+ TY +PV + Sbjct: 126 REGVKFQQVSTDEVYGSLGPEGFFTEATPLDPHSPYSASKTSADLFVKAYADTYKLPVTI 185 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ LVL+KGR Sbjct: 186 TRCSNNYGPYQFPEKLIPLMINNCLNKQSLPVYGDGMQIRDWLYVEDHCKAIDLVLQKGR 245 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YN+GG+NE+ NI IV I + + S + LI+ + DR GHDRRY ID SKI Sbjct: 246 AGEVYNVGGHNEQPNIAIVRSIISYVSEKVDPSIDES-LIKHVTDRKGHDRRYGIDPSKI 304 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + E+GW P+ G+ KT+ WYL+N W Sbjct: 305 REELGWEPETMFAEGIRKTIDWYLENRQW 333 >gi|313202902|ref|YP_004041559.1| dtdp-glucose 4,6-dehydratase [Paludibacter propionicigenes WB4] gi|312442218|gb|ADQ78574.1| dTDP-glucose 4,6-dehydratase [Paludibacter propionicigenes WB4] Length = 343 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 166/333 (49%), Positives = 223/333 (66%), Gaps = 8/333 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS + R VN + +++ +DKLTYAGNL +LK++ + ++F++ DIC Sbjct: 6 HILITGGAGFIGSHVVRLFVNKYPEYKIINLDKLTYAGNLANLKDVEDNANYTFIKGDIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + ++Q D +++ AAESHVDRSI F TN++GT LL+ + W + Sbjct: 66 DFDQMLALFNQYQIDGVIHLAAESHVDRSIKDPFTFAQTNVMGTLSLLQAAKQSW----K 121 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D D F ISTDEVYG+L D LF+E YNP SPYSA+KASSD+ V A+ TYG+P Sbjct: 122 DAYDGKLFYHISTDEVYGALEMDSELFTETTNYNPHSPYSASKASSDHFVRAFHDTYGMP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DH RA+ L+ Sbjct: 182 VIVTNCSNNYGPYQFPEKLIPLFINNIRHGKSLPVYGKGENVRDWLYVVDHARAIDLIFH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 G+ E YNIGG NE NIDI+ + LD L+ + S LI ++ DR GHD RYAID Sbjct: 242 TGKTAETYNIGGFNEWTNIDIIRVLIKTLDRLLGHAEGSSDHLITYVTDRAGHDLRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K+K+E+GW P E G+ KTV WYLDN W Sbjct: 302 STKLKTELGWEPSLQFEEGIEKTVRWYLDNQEW 334 >gi|229171964|ref|ZP_04299529.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus MM3] gi|228611307|gb|EEK68564.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus MM3] Length = 323 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 168/336 (50%), Positives = 223/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQGHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVHVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +QISTDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQISTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 VL++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VLVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ N+D+V +I LL E I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNVDVVEQIISLLGKT-------KEDIAYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E+GW PQ E GL +TV WY + WW+PL Sbjct: 285 QKMKNELGWEPQYTFEQGLKETVEWYEYHIEWWKPL 320 >gi|218681702|ref|ZP_03529503.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CIAT 894] Length = 246 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 150/246 (60%), Positives = 188/246 (76%), Gaps = 1/246 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGSAL R+LV+++ +VL +D LTYAGNL SLK + + + FL DICDR Sbjct: 1 MVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNLASLKSVESAPNYQFLHADICDRA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 ++ A F+PD +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L K Sbjct: 61 RMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDAHSK 120 Query: 124 DQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FRFL +STDEVYGSLD +GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV++S Sbjct: 121 SAFRFLHVSTDEVYGSLDDQGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPVVVS 180 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RALY + KGR Sbjct: 181 NCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYTIASKGRP 240 Query: 243 GERYNI 248 GE+YN+ Sbjct: 241 GEKYNV 246 >gi|88802244|ref|ZP_01117771.1| dTDP-glucose 4,6-dehydratase [Polaribacter irgensii 23-P] gi|88781102|gb|EAR12280.1| dTDP-glucose 4,6-dehydratase [Polaribacter irgensii 23-P] Length = 350 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 165/347 (47%), Positives = 236/347 (68%), Gaps = 15/347 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + R LVN + +++ +D LTYAGNL +LK+I ++F++ DICD Sbjct: 5 ILVTGGAGFIGSHVVRLLVNKYPEYRIVNMDVLTYAGNLENLKDIQDKVNYTFVKCDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ +E+Q ++++ AAE+HVDRSI F TN++GT LL+ + +W+ +D Sbjct: 65 SEKVKNVFEEYQIYSVIHLAAETHVDRSIKDPFSFAQTNVMGTLSLLQAAKDYWN---ED 121 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K++ F +STDEVYGSL +G F+E Y+P SPYSA+KASSD+ V A+ TY +P++ Sbjct: 122 FKEKL-FYHVSTDEVYGSLGAEGYFTEQTNYDPHSPYSASKASSDHFVRAFADTYSLPIV 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYG Y FPEKLIPL I ++ + +YG G+NVRDWL+V+DH RA+ ++ G Sbjct: 181 ISNCSNNYGSYQFPEKLIPLFINNIVNNKPLPVYGKGENVRDWLFVDDHARAIDVIFHNG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 +IGE YNIGG NE KNID++ + +D L+ + +E LI ++ DR GHD RYAIDS+ Sbjct: 241 KIGETYNIGGFNEWKNIDLIKIMIKTVDRLLAREEGSSEKLITYVTDRAGHDLRYAIDST 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW--------WRPLYKEL 338 K+K E+GW P E G+ KTV WYLDN W ++ YKE+ Sbjct: 301 KLKEELGWEPSLQFEEGIEKTVQWYLDNKSWLEGVTSGSYQNYYKEM 347 >gi|14521381|ref|NP_126857.1| dTDP-glucose 4,6-dehydratase [Pyrococcus abyssi GE5] gi|5458599|emb|CAB50087.1| rfbB dTDP-glucose 4,6-dehydratase [Pyrococcus abyssi GE5] Length = 333 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 171/340 (50%), Positives = 219/340 (64%), Gaps = 22/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 MR++VTGG GFIGS RY++ ND +V+ +DKLTY N +LK+I ++F++ Sbjct: 1 MRILVTGGMGFIGSNFIRYILEKHNDW--EVINLDKLTYGSNPANLKDIQDDPRYTFVKG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E +R +K+ DAIV+FAAESHVDRSI D F+ +N+IGT+ LLE R Sbjct: 59 DVADFELVRELIKKV--DAIVHFAAESHVDRSISSPDNFLHSNVIGTYTLLEAIR----- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + ISTDEVYG + KG F+E+ PSSPYSATKA+SD LVL W TYG+ Sbjct: 112 ---KENPGVRLVHISTDEVYGDILKGSFTEEDRLMPSSPYSATKAASDMLVLGWARTYGL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ C+NNYGPY FPEKLIP I R G V +YG G+NVRDWLYVEDHVRA+ VL Sbjct: 169 NASITRCTNNYGPYQFPEKLIPKTIIRAKMGLKVPIYGTGKNVRDWLYVEDHVRAIEAVL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG E YNI ER N+++V I ++D LI F+EDRPGHD RY++D Sbjct: 229 LKGEAREIYNISAGEERTNLEVVRTILRIMD-------KDESLIEFVEDRPGHDIRYSLD 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 S KI E+ W P+ E G+ KTV WYL+N WWW+PL E Sbjct: 282 SWKIIRELKWRPKYRFEEGIKKTVEWYLENEWWWKPLINE 321 >gi|253575948|ref|ZP_04853282.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844742|gb|EES72756.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] Length = 340 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 224/333 (67%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y++ Q+L +D LTYAGNL +LK + + +F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFVLYMLKQHPNYQILNVDALTYAGNLENLKSVEGNPNHTFIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + AL D IVNFAAESHVDRSIL D F+ TN++GT +LL+ + Sbjct: 61 TEAKAM-DALIAQGVDVIVNFAAESHVDRSILEPDIFVKTNVLGTQVLLDAAK------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +++Q+STDEVYGSL + GLF+E+ P P+SPYSA+KA D V A+ T+G+P Sbjct: 113 --KHGVGKYVQVSTDEVYGSLGETGLFTEETPLAPNSPYSASKAGGDLFVRAYHETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I++ + + +YGDG N+RDWLYVEDH A+ LV+ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLMISKALSDEPLPVYGDGLNIRDWLYVEDHCSAIDLVIH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNIGGNNER N+ IV I L P+S LI+ ++DRPGHDRRY ID Sbjct: 231 HGRDGEIYNIGGNNERTNLHIVRTI--LEQLGKPES-----LIKHVQDRPGHDRRYGIDP 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +KI E+GW P+ + E+G+ +T+ WYLDN WW Sbjct: 284 TKIMKELGWKPKHSFETGIKETIRWYLDNKEWW 316 >gi|313904863|ref|ZP_07838235.1| dTDP-glucose 4,6-dehydratase [Eubacterium cellulosolvens 6] gi|313470296|gb|EFR65626.1| dTDP-glucose 4,6-dehydratase [Eubacterium cellulosolvens 6] Length = 343 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 173/337 (51%), Positives = 221/337 (65%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS Y L + +++ +D LTYAGNL++L+ + F F+++DI Sbjct: 1 MNIIVTGGAGFIGSNFVFYELKAHPEDRIICVDSLTYAGNLSTLEPVMNHPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E +PD + NFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEKPDIVANFAAESHVDRSIENPTVFLNTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS +KAS+D LV A+ TY Sbjct: 114 --KYGIRRYHQVSTDEVYGDLPLDRPDLFFHEDTPIHTSSPYSTSKASADLLVNAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVSISRCSNNYGPYQFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG +GE YNIGG+NE KNIDIV I LD K YS LI + DR GHDRRYA Sbjct: 232 IMRKGTVGEVYNIGGHNEMKNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI E+GW P+ + G+ T+ WYLDN WW Sbjct: 285 IDPTKIHGELGWLPETMFKDGIKMTIQWYLDNKSWWE 321 >gi|206977702|ref|ZP_03238594.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus H3081.97] gi|222094944|ref|YP_002529004.1| dtdp-glucose 4,6-dehydratase [Bacillus cereus Q1] gi|206744130|gb|EDZ55545.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus H3081.97] gi|221239002|gb|ACM11712.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus Q1] Length = 322 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 222/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPLPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYHLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH RA+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCRAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|291532309|emb|CBL05422.1| dTDP-glucose 4,6-dehydratase [Megamonas hypermegale ART12/1] Length = 339 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 222/339 (65%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y L N +V+ +DKLTYAGNL +L+ ++ F F++ DI Sbjct: 1 MKILVTGGAGFIGSNFVYYELDNYPSDEVICLDKLTYAGNLETLEVAIKNPKFKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + QPD +VNFAAESHVDRSI + F+ TN++GT +L++ R Sbjct: 61 ADRAFVDDLFSSEQPDVVVNFAAESHVDRSIENPEIFLQTNVMGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYSA+KAS+D LV A+ TY Sbjct: 114 --KYGNIRYHQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSASKASADLLVQAYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 KLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKKLPVYGKGENVRDWLYVEDHCSAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG+IGE YNIGG+NER N+++V +I + +LI F+ DRPGHDRRYA Sbjct: 232 IIRKGKIGEVYNIGGHNERTNLEVV-------KTIIKELGKSEDLIEFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID +KI +E+GW P + G+ KT+ WYL + WW + Sbjct: 285 IDPTKIHNELGWLPATKFDDGIKKTIEWYLTHKSWWEKI 323 >gi|268680416|ref|YP_003304847.1| dTDP-glucose 4,6-dehydratase [Sulfurospirillum deleyianum DSM 6946] gi|268618447|gb|ACZ12812.1| dTDP-glucose 4,6-dehydratase [Sulfurospirillum deleyianum DSM 6946] Length = 338 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 160/329 (48%), Positives = 222/329 (67%), Gaps = 5/329 (1%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y L + ++ +D LTYAGN+ +L E+ +F+Q DICD Sbjct: 6 ILVTGCAGFIGSNFVPYFLAEHPEYHLINLDLLTYAGNVENLSEVEHHPRHTFVQGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 R + S +++ +++FAAESHVD SI F+ TN+ GTF LL+ W + Sbjct: 66 RALVESLFEQYDIQGVIHFAAESHVDNSIKNPGVFVETNVTGTFTLLDVAYKAWMQKPFV 125 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + RF ISTDEVYG+L + GLF+E+ PY P+SPYSA+KASSD +V A+ HTYG+ Sbjct: 126 LKEGYETCRFHHISTDEVYGTLGETGLFTENTPYAPNSPYSASKASSDMIVRAYHHTYGM 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +++NCSNNYGP EKLIP I + + ++ +YGDG+N+RDWLYVEDH + + LV Sbjct: 186 NTVITNCSNNYGPKQHDEKLIPTIIRKALSNQNIPIYGDGKNIRDWLYVEDHCKGIDLVF 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G GE YNIGG NER N+ I +I +LD L PK +++ E I F+EDR GHDRRYAID Sbjct: 246 HDGISGETYNIGGRNERDNLYIAHKICEILDTLKPKEHAYKEQISFVEDRAGHDRRYAID 305 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +SKI++++GW +EN ESG+ KT+ WYL+ Sbjct: 306 ASKIETKLGWVAEENFESGIVKTIEWYLN 334 >gi|229195517|ref|ZP_04322285.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus m1293] gi|228588057|gb|EEK46107.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus m1293] Length = 322 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 222/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPLPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH RA+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCRAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|169831835|ref|YP_001717817.1| dTDP-glucose 4,6-dehydratase [Candidatus Desulforudis audaxviator MP104C] gi|169638679|gb|ACA60185.1| dTDP-glucose 4,6-dehydratase [Candidatus Desulforudis audaxviator MP104C] Length = 342 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 222/333 (66%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ R+++ + V +DKLTYAGNL +L+E+ + ++F++ DI Sbjct: 1 MRLLVTGGAGFIGANFIRFVLREYPDWHVTNLDKLTYAGNLENLREVEDNPRYTFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + DA+VNFAAESHVDRSIL A FI TN+ GT +LLE R + + Sbjct: 61 ADREAVAGLFAGGGFDAVVNFAAESHVDRSILDAGPFIETNVRGTQVLLEAARRYGVRV- 119 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 FLQ+STDEVYGSL D F+E+ P P+SPYSA+KA++D L A+ TYG+ Sbjct: 120 --------FLQVSTDEVYGSLGPDDPPFTEEHPVKPNSPYSASKAAADLLCRAYHETYGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+++ CSNNYGPY FPEKLIPL I ++E + +YGDG NVRDW++VEDH R + L Sbjct: 172 PVVVNRCSNNYGPYQFPEKLIPLMIANVLENKPLPVYGDGLNVRDWIHVEDHCRGIAAAL 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++GR G YN GG ER N+D+V I +LD P+S LIRF+ DRPGHDRRYA+D Sbjct: 232 RRGRPGAVYNFGGRAERTNLDVVRTILRILDR--PES-----LIRFVADRPGHDRRYAMD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ + E+ W P+ E GL TV WY+DN W Sbjct: 285 IARAERELDWRPRWTFEDGLEATVRWYVDNAEW 317 >gi|237714664|ref|ZP_04545145.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D1] gi|262406529|ref|ZP_06083078.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|294645678|ref|ZP_06723365.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294806947|ref|ZP_06765770.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|229445433|gb|EEO51224.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D1] gi|262355232|gb|EEZ04323.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|292638957|gb|EFF57288.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294445834|gb|EFG14478.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] Length = 357 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/346 (48%), Positives = 228/346 (65%), Gaps = 6/346 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK++ ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVNKYPEYHIVNLDKLTYAGNLANLKDVEDQPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + K++ D +++ AAESHVDRSI F TN++GT LL+ +L W L + Sbjct: 67 FEKMLEIFKQYHIDGVIHLAAESHVDRSIKDPLTFAQTNVMGTLSLLQAAKLTWEILPEC 126 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +D+ RF ISTDEVYG+L D F+E+ Y P SPYSA+KA SD+ V A+ TYG+P Sbjct: 127 YEDK-RFYHISTDEVYGALEFDGTFFTEETKYQPHSPYSASKAGSDHFVRAFHDTYGMPT 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + +G + +YG G+NVRDWLYV DH RA+ L+ Sbjct: 186 IVTNCSNNYGPYQFPEKLIPLFINNIRQGKPLPVYGKGENVRDWLYVVDHARAIDLIFHN 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G + YNIGG NE NID++ I +D L+ S ++ LI ++ DR GHD RYAIDS Sbjct: 246 GNTADTYNIGGFNEWTNIDLIKVIIKTVDRLLGNSEGTSDHLITYVTDRKGHDLRYAIDS 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPLYKELKPDND 343 +K+K+E+GW P E G+ KTV WYLDN NW + + DND Sbjct: 306 NKLKNELGWEPSLQFEEGIEKTVRWYLDNQNWMDNVTTGDYQKDND 351 >gi|226323948|ref|ZP_03799466.1| hypothetical protein COPCOM_01725 [Coprococcus comes ATCC 27758] gi|225207497|gb|EEG89851.1| hypothetical protein COPCOM_01725 [Coprococcus comes ATCC 27758] Length = 332 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 168/345 (48%), Positives = 230/345 (66%), Gaps = 22/345 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ + Q++ +D LTYAG++++L+ ++ F F++ + Sbjct: 1 MKIIVTGGAGFIGSNFIYYMMEKHSEDQIICLDALTYAGHMSTLEVAMKNPAFRFVKASV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + +E PD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDRVTVYRLFEEEHPDIVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG----LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K +R+ Q+STDEVYG L F+E+ P + SSPYSA+KA++D LV ++ TY Sbjct: 114 --KYGIWRYHQVSTDEVYGDLPLERPDLFFTEETPIHTSSPYSASKAAADLLVQSYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYH PEKLIPL I + + +YGDG+NVRDWLYV+DH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHLPEKLIPLMIVEALHDRPLPVYGDGKNVRDWLYVKDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G+ GE YN+GG+NE KNIDIV I L P+ ELI ++EDR GHDRRYA Sbjct: 232 ILRHGKEGEIYNVGGHNEMKNIDIVKLICRELGK--PE-----ELITYVEDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY-KELK 339 ID SKI E+GW P+ + G+ KT+ WYL++ WWRP+ KE+K Sbjct: 285 IDPSKIHRELGWLPETSFAEGIKKTINWYLNHQEWWRPIVEKEMK 329 >gi|160885739|ref|ZP_02066742.1| hypothetical protein BACOVA_03743 [Bacteroides ovatus ATCC 8483] gi|156108552|gb|EDO10297.1| hypothetical protein BACOVA_03743 [Bacteroides ovatus ATCC 8483] Length = 354 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/332 (50%), Positives = 220/332 (66%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIEGQPNYTFVKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I K++ D++++ AAESHVDRSI F TN++GT LL+ +L W S+ Sbjct: 65 FERIIQLFKQYNIDSVIHLAAESHVDRSIKDPFIFAQTNVMGTLSLLQAAKLAWET-SET 123 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D F ISTDEVYG+LD F+E Y P SPYSA+KA SD+ V A+ TYG+PV Sbjct: 124 GYDHKLFYHISTDEVYGALDFDGTFFTEQTKYQPHSPYSASKAGSDHFVRAFHDTYGMPV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + G + +YG G+NVRDWLYV DH RA+ + K Sbjct: 184 IVTNCSNNYGPYQFPEKLIPLFINNIRHGKALPVYGKGENVRDWLYVVDHARAIDTIFHK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+I E YNIGG NE NID++ I +D L+ +E LI ++ DR GHD RYAIDS Sbjct: 244 GKIAETYNIGGFNEWTNIDLIKVIIKTVDRLLGNPDGTSEKLITYVADRKGHDLRYAIDS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K E+GW P E G+ KTV WYL+NN W Sbjct: 304 NKLKKELGWEPSLQFEEGIEKTVRWYLENNEW 335 >gi|94495494|ref|ZP_01302074.1| dTDP-glucose 4,6-dehydratase [Sphingomonas sp. SKA58] gi|94424882|gb|EAT09903.1| dTDP-glucose 4,6-dehydratase [Sphingomonas sp. SKA58] Length = 356 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 166/353 (47%), Positives = 219/353 (62%), Gaps = 29/353 (8%) Query: 3 LIVTGGAGFIGSALCRY----LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 LI+TGGAGFIG+ R+ ND ++V+D LTYAGN ++ ++ S ++ D Sbjct: 4 LIITGGAGFIGANFVRHWRKVSPND---GIVVLDALTYAGNPANIADVPD---VSLVEGD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + + + D IV+FAAESHVDRSI G D F+TTN+IGT LL+ + W L Sbjct: 58 ICDTALVSQLIADHDVDTIVHFAAESHVDRSITGPDAFVTTNVIGTHSLLKAAKAAW--L 115 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF +STDEVYG+L D FSE PY P+SPYSA+KA SD+LV A+ HTYG Sbjct: 116 DKGTGRPHRFHHVSTDEVYGTLELDDPAFSESTPYAPNSPYSASKAGSDHLVRAYHHTYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + SNCSNNYGPY FPEKLIPL + G ++ +YGDG N+RDWL+VEDH + L+ Sbjct: 176 LETTTSNCSNNYGPYQFPEKLIPLFTLNALSGKNLPIYGDGMNIRDWLHVEDHCIGIELI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEI---------------GFLLDALIPKSYSHTELI 281 ++KGRIGE YN+GG E NI+++ EI DA EL+ Sbjct: 236 MRKGRIGETYNVGGGQELPNIEVIKEICRGVDEAFARNPALASVFPDAPAAHGRPSAELM 295 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++DR GHDRRYAID +KI+SE+G+ P + G T+ W+LDN WWRPL Sbjct: 296 TYVQDRKGHDRRYAIDETKIRSELGYEPSRDFPQGFADTLNWFLDNQDWWRPL 348 >gi|118476793|ref|YP_893944.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis str. Al Hakam] gi|225863170|ref|YP_002748548.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus 03BB102] gi|118416018|gb|ABK84437.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis str. Al Hakam] gi|225787385|gb|ACO27602.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus 03BB102] Length = 322 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EQDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|332830090|gb|EGK02718.1| dTDP-glucose 4,6-dehydratase [Dysgonomonas gadei ATCC BAA-286] Length = 378 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/358 (46%), Positives = 223/358 (62%), Gaps = 28/358 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++TGGAGFIGS ++++ ++++ D LTYAGNL +L E + +F++ DI Sbjct: 1 MTYLITGGAGFIGSNFVKHMLAVYPDAKLIIFDALTYAGNLGTLSEELKDTRVTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR E D ++NFAAESHVDRSI F+ NI+GT LL+ + W+ Sbjct: 61 CDRNATEKVFSEHTIDYVINFAAESHVDRSIENPQLFLQVNILGTQNLLDTAKKHWTTGK 120 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + ++LQ+STDEVYGSL D+G F+E P +P SPYSA KA D +V A+G Sbjct: 121 DENNYPIWRKGVKYLQVSTDEVYGSLGDEGYFTEATPLDPRSPYSAGKAGGDLIVRAYGE 180 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++ G + +YGDG NVRDWLYVEDH +A+ Sbjct: 181 TYKMPVNITRCSNNYGPYHFPEKLIPLIIRNILSGKQLPVYGDGSNVRDWLYVEDHCKAI 240 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEI---------------------GFLLDALIP 272 VL KGRI E YN+GG+NE+KN+DIV + D I Sbjct: 241 DAVLHKGRIDEVYNVGGHNEKKNLDIVKLVIKTIHDIMEKEPRYREVLNKKEVAADGSID 300 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+ + LI F++DR GHD RYAID +KI +E+GW P+ N ++G+ KT+ WYLDN W Sbjct: 301 ISWINDSLISFVKDRQGHDHRYAIDPTKISTELGWLPETNFDTGIVKTIYWYLDNQTW 358 >gi|238916053|ref|YP_002929570.1| dTDP-glucose 4,6-dehydratase [Eubacterium eligens ATCC 27750] gi|238871413|gb|ACR71123.1| dTDP-glucose 4,6-dehydratase [Eubacterium eligens ATCC 27750] Length = 339 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 168/340 (49%), Positives = 225/340 (66%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L+ + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFIFHMLNKYPDYRIICLDCLTYAGNLSTLEPVMSNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 TDREAVYKLFEEEHPDMVVNFAAESHVDRSIENPEVFLITNILGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE++NIDIV LI K E LI + DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEKRNIDIV--------KLICKELGKPESLIVHVGDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIQWYLDNKEWWETI 323 >gi|197119710|ref|YP_002140137.1| dTDP-glucose 4,6-dehydratase [Geobacter bemidjiensis Bem] gi|197089070|gb|ACH40341.1| dTDP-glucose 4,6-dehydratase [Geobacter bemidjiensis Bem] Length = 355 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 167/331 (50%), Positives = 226/331 (68%), Gaps = 8/331 (2%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS ++ + +V+ +D LTYAGNL +L + ++ + F++ DICD Sbjct: 10 LLVTGGAGFIGSNFINHFMAGNPGCRVINLDLLTYAGNLKNLAAVEENPDYRFVKGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + DA+V+FAAESHVDRSI G D F+ TN++GT LLE +RL + Sbjct: 70 AGLVAGLLAEGEVDAVVHFAAESHVDRSITGPDIFVRTNVLGTQTLLEASRL-----HAE 124 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFLQ+STDEVYGSL +G F+E+ P P+SPYSA+KA +D LV A+ T+G+ L Sbjct: 125 RVAGFRFLQVSTDEVYGSLGAQGYFTEETPLAPNSPYSASKAGADLLVRAYSETFGLATL 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + CSNNYGPYHFPEKLIPL I +++ + +YGDG NVRDWL+V+DH A+ VLK G Sbjct: 185 NTRCSNNYGPYHFPEKLIPLMIHNILKKKPLPVYGDGLNVRDWLHVKDHSVAIERVLKLG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + GE +N+GGNNE KNIDIV + L+D + + + LI F++DR GHDRRYAID+S Sbjct: 245 KPGEIFNVGGNNEWKNIDIVNLVCDLMDERLGRRPGESRGLIAFVKDRKGHDRRYAIDAS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K E+ W P E G+ +T+ WYL N W Sbjct: 305 KLKRELSWEPSYTFERGIAETIDWYLANQGW 335 >gi|325685366|gb|EGD27473.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 345 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 231/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK++ F F+++DI Sbjct: 1 MKIIVTGGAGFIGSNFVFYMMKKHPDYKIICLDKLTYAGNLSTLKDVMDKPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG SLD+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLSLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R ++ + +YG+GQNVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALDDKPLPVYGEGQNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG +GE YNIGG+NE NIDIV I LD K YS LI + DR GHD+RYA Sbjct: 232 ILEKGTVGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDQRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPTKIHDELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|251771901|gb|EES52475.1| dTDP-glucose 4,6-dehydratase [Leptospirillum ferrodiazotrophum] Length = 366 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 211/336 (62%), Gaps = 5/336 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAGFIG+ L + + K +V+ D LTYAGNL +L +S F+ DI D + Sbjct: 15 IVTGGAGFIGANLVHRIRREKKAKVVTFDLLTYAGNLANLDALSHDPDHLFVGGDIRDPK 74 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +P +++ AAESHVDRSI EF+ TN+ GTF+LL+ +W + + Sbjct: 75 AVAELFLRHRPSGVLHLAAESHVDRSIESPGEFVATNVFGTFVLLDAALRYWE--REGRP 132 Query: 124 DQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 FRFL +STDEVYGSL F E PY P+SPY+A+KA+SD+ V A+ HTYG+PV+ Sbjct: 133 GDFRFLHVSTDEVYGSLSPSDPPFRETTPYAPNSPYAASKAASDHFVRAYHHTYGLPVVT 192 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP+ FPEKLIP I +EG + LYGDG+N+RDW+YVEDH + +GR Sbjct: 193 TNCSNNYGPWQFPEKLIPTVILAALEGRPIPLYGDGENIRDWIYVEDHCEGVLAAFDRGR 252 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH-TELIRFIEDRPGHDRRYAIDSSK 300 GE Y IG N R N ++V + +LD L P+ +LI + DRPGHDRRY ID++K Sbjct: 253 PGETYAIGAGNPRTNKELVLTLCEILDRLAPRPQGRIRDLITPVPDRPGHDRRYEIDAAK 312 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 ++ E+GW P L KTV WYL++ WW L + Sbjct: 313 VRRELGWAPAHTFGEALEKTVRWYLEHRPWWEALRQ 348 >gi|291550903|emb|CBL27165.1| dTDP-glucose 4,6-dehydratase [Ruminococcus torques L2-14] Length = 339 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 167/340 (49%), Positives = 224/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +DKLTYAGNL++L+ + + F F++ DI Sbjct: 1 MNIIVTGGAGFIGSNFVFHMLNKYPDYRIICLDKLTYAGNLSTLEPVMDNPNFRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI F+ TNI+ T L++ R Sbjct: 61 CDREAVNKLFEEEHPDVVVNFAAESHVDRSIENPGIFLETNIMETQTLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YN+GG+NE++NI+IV +I K E LI + DR GHD RY Sbjct: 232 IIHNGRVGEVYNVGGHNEKQNIEIV--------KIICKELGKPESLITHVGDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIQWYLDNRDWWETI 323 >gi|187251271|ref|YP_001875753.1| dTDP-glucose 4,6-dehydratase [Elusimicrobium minutum Pei191] gi|186971431|gb|ACC98416.1| DTDP-glucose 4,6-dehydratase [Elusimicrobium minutum Pei191] Length = 337 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/330 (50%), Positives = 220/330 (66%), Gaps = 6/330 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y V+ +DKLTYAG+L++L E++ + ++F++ DICD Sbjct: 6 ILVTGGAGFIGSNFIPYFAAAYPDYNVINLDKLTYAGDLSNLSEVANAENYTFVEGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I K+ +++FAAESHVD SI G FI TNI GTF LL+ + +W Sbjct: 66 RALIEDLFKKHDIKGVIHFAAESHVDNSITGPLPFIKTNIEGTFTLLDAAKNYWMEAPFK 125 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + RF ISTDEVYG+L + GLF E PY P+SPYSA+KASSD++V A+ HTYG+ Sbjct: 126 YKKGYEGCRFHHISTDEVYGTLGETGLFEETTPYAPNSPYSASKASSDFIVRAYHHTYGL 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V SNCSNNYGP EKLIP I + + G + +YGDG+NVRDWLYV DH + + LV Sbjct: 186 DVTTSNCSNNYGPKQHKEKLIPTIIRKALAGQSIPIYGDGKNVRDWLYVLDHCKGIDLVF 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAI 296 KG+ GE YNIGG NER N++IV I +LD P S+ LI F++DRPGHD+RYAI Sbjct: 246 HKGKAGETYNIGGRNERTNLEIVDIICAVLDQKKPLNGKSYKSLITFVKDRPGHDKRYAI 305 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D++K ++E+GW E ++G+ KT+ WYL+ Sbjct: 306 DATKFETELGWKADETFDTGIIKTINWYLE 335 >gi|324325335|gb|ADY20595.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 322 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 168/339 (49%), Positives = 223/339 (65%), Gaps = 20/339 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + ++E IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIQERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH RA+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCRAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAID 297 KGRIGE YNIGGNNE+ NID+V +I LL TE I ++ DR GHDRRYAID Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLL--------GKTEKDIEYVTDRLGHDRRYAID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 284 AEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|217076952|ref|YP_002334668.1| dTDP-glucose 4,6-dehydratase [Thermosipho africanus TCF52B] gi|217036805|gb|ACJ75327.1| dTDP-glucose 4,6-dehydratase [Thermosipho africanus TCF52B] Length = 356 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 167/334 (50%), Positives = 230/334 (68%), Gaps = 5/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQV 57 M+L+VTG GFIGS Y + K Q++ +DKLTYAGNL++L ++S Q F F++ Sbjct: 1 MKLLVTGCCGFIGSNFVYYYLEKHKEAQIIGLDKLTYAGNLDNLSKLSDDQKKRFEFVRG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + E I ++++ D IVNFAAESHVDRSI EF+ TN++G LL+ R W+ Sbjct: 61 DINNGELIEYLIEKYDIDVIVNFAAESHVDRSIYNPREFLETNVLGVQTLLDVVRKKWNK 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + +F+QISTDEVYG+L G F+E P +P SPYSA+KAS+D LVLA+ TYG Sbjct: 121 NGKWIEGK-KFIQISTDEVYGTLGPSGKFTEKTPISPRSPYSASKASADLLVLAYHETYG 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY FPEKLIPL I +E ++ +YGDG+ +RDW++V DH RA+ LV Sbjct: 180 MPVNITRCSNNYGPYQFPEKLIPLMILNALEHKNLPIYGDGRQIRDWIHVLDHCRAIDLV 239 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG++GE YN+G +NE +NI IV +I +L + LI+ ++DRPGHDRRYAI Sbjct: 240 IEKGKVGEVYNVGADNEWENIKIVRKIIEILREFTKDEEINENLIKHVKDRPGHDRRYAI 299 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DS+KI+ E+GW P+ E GL T+ WYLDN W Sbjct: 300 DSTKIQHELGWKPEITFEKGLRDTIKWYLDNKEW 333 >gi|226950131|ref|YP_002805222.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] gi|226841481|gb|ACO84147.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] Length = 354 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 234/338 (69%), Gaps = 5/338 (1%) Query: 4 IVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS Y++N + +I+++ +DKLTYAG+L +LK + N + F++ DI Sbjct: 5 LVTGGAGFIGSNFIIYMLNKYNEEQIKIINLDKLTYAGSLENLKCVENKNNYMFIKGDIS 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + K++ D I+NFAAESHVDRSI F+ TN++GT LL + +W + Sbjct: 65 DKNLVDNVFKQYDIDYIINFAAESHVDRSIQEPQIFVETNVLGTVNLLNTAKKYW-IFND 123 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ ++LQ+STDEVYGSL K G F+ED P +P SPYSA+KAS+D +V ++ TY +P+ Sbjct: 124 VFREGKKYLQVSTDEVYGSLGKSGYFTEDTPLDPHSPYSASKASADLIVRSYYDTYKMPI 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I + + +YGDG+N+RDWLYVE+H RA+ ++++ Sbjct: 184 NITRCSNNYGPYQFPEKLIPLIINNYLNNKPIPIYGDGKNIRDWLYVEEHCRAIDMIIQN 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE YNIGG NER+N+ I+ I +L+ + + +LI++++DR GHD+RYAID S Sbjct: 244 GRMGEIYNIGGYNERENVYIIKYIIEVLNKITRNNKRPNKLIKYVKDRKGHDKRYAIDPS 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI+++I W Q + E G+ KTV WYL+N W + E Sbjct: 304 KIENKIKWESQISFEDGILKTVNWYLNNKQWLNKVTSE 341 >gi|219670472|ref|YP_002460907.1| dTDP-glucose 4,6-dehydratase [Desulfitobacterium hafniense DCB-2] gi|219540732|gb|ACL22471.1| dTDP-glucose 4,6-dehydratase [Desulfitobacterium hafniense DCB-2] Length = 337 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 168/336 (50%), Positives = 220/336 (65%), Gaps = 23/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+LIVTGGAGFIG YL+ N L +++ +DKLTYAGN+ +L + F F++ DI Sbjct: 1 MKLIVTGGAGFIGGNFVHYLLKNYLDYKIICLDKLTYAGNMETLDPVITCENFKFIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I + +PD IVNFAAESHVDRSI F+ TN+ GT +LL+ + Sbjct: 61 ADREAIYQIFENEKPDVIVNFAAESHVDRSIADPSVFLLTNVFGTQVLLDACK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P SSPYSA+KAS+D LV A+ TY Sbjct: 114 --KYGISRYHQVSTDEVYGDLPLDRPDLFFTEETPIQTSSPYSASKASADLLVQAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIPV +S CSNNYGPYHFPEKLIPL I ++ + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 GIPVTISRCSNNYGPYHFPEKLIPLMIANVLNDKPLPVYGTGENVRDWLYVEDHCSAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+ +V I + E I++++DR GHD RYA Sbjct: 232 IIHKGRVGEIYNIGGHNERTNLQVV--------QTIIRELGKGE-IKYVKDRAGHDLRYA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI E+GW P + E+G+ +T+ WYL+N WW Sbjct: 283 IDPTKIDIELGWRPTTSFENGIKRTIQWYLENRAWW 318 >gi|196036256|ref|ZP_03103655.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus W] gi|195991231|gb|EDX55200.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus W] Length = 322 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 222/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHSNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NI++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIEVVEQIITLLGKT-------EQDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|295084059|emb|CBK65582.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens XB1A] Length = 357 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 163/332 (49%), Positives = 222/332 (66%), Gaps = 5/332 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK++ ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDVEDQPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + K++ D +++ AAESHVDRSI F TN++GT LL+ +L W L + Sbjct: 67 FEKMLEIFKQYHIDGVIHLAAESHVDRSIKDPLTFAQTNVMGTLSLLQAAKLTWEILPEC 126 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +D+ RF ISTDEVYG+L D F+E+ Y P SPYSA+KA SD+ V A+ TYG+P Sbjct: 127 YEDK-RFYHISTDEVYGALEFDGTFFTEETKYQPHSPYSASKAGSDHFVRAFHDTYGMPT 185 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + +G + +YG G+NVRDWLYV DH RA+ L+ Sbjct: 186 IVTNCSNNYGPYQFPEKLIPLFINNIRQGKPLPVYGKGENVRDWLYVVDHARAIDLIFHN 245 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G + YNIGG NE NID++ I +D L+ S ++ LI ++ DR GHD RYAIDS Sbjct: 246 GNTADTYNIGGFNEWTNIDLIKVIIKTVDRLLGNSEGTSDHLITYVTDRKGHDLRYAIDS 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K+E+GW P E G+ KTV WYLDN W Sbjct: 306 NKLKNELGWEPSLQFEEGIEKTVRWYLDNQNW 337 >gi|313203771|ref|YP_004042428.1| dtdp-glucose 4,6-dehydratase [Paludibacter propionicigenes WB4] gi|312443087|gb|ADQ79443.1| dTDP-glucose 4,6-dehydratase [Paludibacter propionicigenes WB4] Length = 387 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 165/331 (49%), Positives = 219/331 (66%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V Q++ +D LTYAGNL +LK+I++++ + F++ DI D Sbjct: 41 ILITGGAGFIGSHVVRLFVTKYPDYQIINLDALTYAGNLENLKDIAEASNYKFVKGDITD 100 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I ++ D +V+ AAESHVDRSI FI TN+ GT LL + W Sbjct: 101 EKFITELFATYKFDGVVHLAAESHVDRSITDPFAFIRTNVFGTANLLNAAKEAWKGDMTG 160 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF ISTDEVYGSL + G F+E+ Y+P SPYSA KASSD+ V A+ HTYG+PV+ Sbjct: 161 K----RFYHISTDEVYGSLGETGFFTEETAYDPRSPYSAAKASSDHFVRAYHHTYGLPVV 216 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYG HFPEKLIPL+I + + +YG G+NVRDWL+V DH RA+ + G Sbjct: 217 LSNCSNNYGANHFPEKLIPLSINNIKNNRPIPIYGKGENVRDWLWVNDHARAIDTIFHNG 276 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 +GE YNIGGNNE NID++ E+ ++D + + + +LI F++DR GHD RYAIDSS Sbjct: 277 VVGETYNIGGNNEWTNIDLIRELCKIMDKKLGREPGESAKLITFVKDRAGHDLRYAIDSS 336 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K++ E+GW P E GL KTV WYL N W Sbjct: 337 KLQRELGWKPSLQFEEGLEKTVDWYLANQEW 367 >gi|160914759|ref|ZP_02076973.1| hypothetical protein EUBDOL_00766 [Eubacterium dolichum DSM 3991] gi|158433299|gb|EDP11588.1| hypothetical protein EUBDOL_00766 [Eubacterium dolichum DSM 3991] Length = 342 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 165/337 (48%), Positives = 230/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR +VTGGAGFIG Y+V + ++V +DKLTYAGNL + K + + F++ DI Sbjct: 1 MRFLVTGGAGFIGGNFVHYMVENYPDDMIVNLDKLTYAGNLETCKPVEDKPNYKFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I ++ + D +VNFAAESHVDRSI + F+ TN++GT LL+ +C+ Sbjct: 61 ADREFIFDLFEKEKFDVVVNFAAESHVDRSIEDPEIFVKTNVMGTTTLLD------ACV- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYS+ KAS+D VLA+ TY Sbjct: 114 --KYGITRYHQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSSAKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALANESLPVYGTGENVRDWLHVYDHCVAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KGR+GE YN+GG+NER N+++V I L+ P+S LI+++EDR GHD RYA Sbjct: 232 IVRKGRVGEVYNVGGHNERTNLEVVKTILKALNK--PES-----LIKYVEDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKLETELGWVPKYNFDTGIQQTIQWYLDNKEWWQ 321 >gi|325474010|gb|EGC77198.1| dTDP-glucose 4,6-dehydratase [Treponema denticola F0402] Length = 362 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 227/339 (66%), Gaps = 14/339 (4%) Query: 3 LIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQ 56 ++VTGGAGFIGS R L+ + +++ +D LTYAGN SL ++ + + F+ Sbjct: 7 ILVTGGAGFIGSNFIRTLLKKEDAFMGRIINLDALTYAGNAASLSDVESEFGGSRYFFIH 66 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +ICD+E I + E+ D +V+FAAESHVDRSILG + F+ TN++GTF LLE + +W Sbjct: 67 GNICDKEIINTIFTEYSIDTVVHFAAESHVDRSILGPEVFLKTNVLGTFNLLETAKQFWK 126 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +D F ISTDEVYGSL +G F E Y+P SPYSA+KASSD+LV A+ HTY Sbjct: 127 KADGTMRDDVLFHHISTDEVYGSLGPEGYFEETTAYDPRSPYSASKASSDHLVKAYFHTY 186 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ +SNCSNNYGP+ FPEKLIPL I M+EG ++ +YGDG+ +RDW++VEDH A+ L Sbjct: 187 GLPITISNCSNNYGPFQFPEKLIPLMILNMLEGKNLPVYGDGKQIRDWIHVEDHNEAVRL 246 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR----FIEDRPGHD 291 +LK GR G+ YNIGG NE +NI ++ + L+ + K+ E +R + DR GHD Sbjct: 247 ILKNGRAGKTYNIGGENEWENIKLLNK---LIQIVCKKTGLEEENVRKTITHVTDRLGHD 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID +KIK+E+ W + E+GL TV WYL+N W Sbjct: 304 RRYAIDCTKIKNELNWKRNFDFETGLENTVDWYLNNKKW 342 >gi|126662747|ref|ZP_01733746.1| dTDP-D-glucose 4,6-dehydratase [Flavobacteria bacterium BAL38] gi|126626126|gb|EAZ96815.1| dTDP-D-glucose 4,6-dehydratase [Flavobacteria bacterium BAL38] Length = 337 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 165/329 (50%), Positives = 225/329 (68%), Gaps = 6/329 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ Y + + LV +D LTYAGNL ++ ++ ++F++ DICD Sbjct: 4 ILVTGGAGFIGANFVPYFIEKNQDYHLVNLDLLTYAGNLENVSDVENHPRYTFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQ 120 R + ++FQ +++FAAESHVD SI G + FI TN++GTF LL+ R LW S +Q Sbjct: 64 RSFVEDLFQKFQFHDVIHFAAESHVDNSISGPEAFIKTNVLGTFNLLDSARKLWMSAPNQ 123 Query: 121 DKK--DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF +STDEVYG+L + GLF E PY P+SPYSA+KA SD +V ++ HTYG+ Sbjct: 124 YNIGFENSRFHHVSTDEVYGTLGETGLFEETTPYAPNSPYSASKAGSDMIVRSYFHTYGM 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ SNCSNNYGP EKLIP I + I G ++ +YGDG+NVRDWLYV DH + + L Sbjct: 184 NVVTSNCSNNYGPKQHNEKLIPTIIRKAISGENIPIYGDGKNVRDWLYVLDHCKGIELAF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KKG+ GE YNIGG NER N+ IV + +L+ L PK+ + + I F++DRPGHD RYAI Sbjct: 244 KKGKSGETYNIGGRNERNNLYIVDVVCSILNELQPKTEGKYQDQITFVKDRPGHDLRYAI 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D++KI++E+GW EN ESG+ KT+ WYL Sbjct: 304 DATKIENELGWKADENFESGIKKTIEWYL 332 >gi|255536062|ref|YP_003096433.1| dTDP-glucose 4,6-dehydratase [Flavobacteriaceae bacterium 3519-10] gi|255342258|gb|ACU08371.1| dTDP-glucose 4,6-dehydratase [Flavobacteriaceae bacterium 3519-10] Length = 359 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 228/338 (67%), Gaps = 10/338 (2%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V N+ +V+ +D LTYAGNL +LK+I + F + DI + Sbjct: 4 ILITGGAGFIGSHVVREFVKNNPDKKVINLDALTYAGNLENLKDIENEPNYVFEKADITN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R ++ +PDA+++ AAESHVDRSI + FI TN+ GT LL R +W+ Sbjct: 64 VDELRKVFEKHRPDAVLHLAAESHVDRSITDPNAFINTNVNGTANLLNLCREFWTLNPDH 123 Query: 122 KKDQFR-------FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + F F +STDEVYGSL + G F E Y+P SPYSA+KA+SD+LV A+G+ Sbjct: 124 QHGSFPDETRNNLFYHVSTDEVYGSLGETGFFLETTAYDPQSPYSASKAASDHLVRAYGN 183 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+P ++SNCSNNYGP HFPEKLIPL I+ ++ G + +YGDG+ RDWL+V DH +A+ Sbjct: 184 TYGMPFIVSNCSNNYGPNHFPEKLIPLCISNILNGKPLPIYGDGKYTRDWLFVIDHAKAI 243 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDR 292 + + + + GE YNIGG NE +NID+V E+ +D + H+E LI +++DRPGHD+ Sbjct: 244 HQIFFEAKTGETYNIGGFNEWQNIDLVKELIKQMDEKLGNPAGHSEKLITYVKDRPGHDK 303 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID++K+ E+GW+P E GL KT+ W+L+N W Sbjct: 304 RYAIDATKLNKELGWYPSVTFEQGLAKTIDWFLENKEW 341 >gi|42780411|ref|NP_977658.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 10987] gi|42736330|gb|AAS40266.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 10987] Length = 322 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 222/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P +P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLSPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|196044387|ref|ZP_03111623.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus 03BB108] gi|196025026|gb|EDX63697.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus 03BB108] Length = 322 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYNTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------EQDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ + GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFKQGLQETVQWYEKNEEWWKPLKK 322 >gi|198275011|ref|ZP_03207543.1| hypothetical protein BACPLE_01170 [Bacteroides plebeius DSM 17135] gi|198272458|gb|EDY96727.1| hypothetical protein BACPLE_01170 [Bacteroides plebeius DSM 17135] Length = 381 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 167/355 (47%), Positives = 226/355 (63%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + +++ +DKLTYAGNL +LK+I + F++ DICD Sbjct: 8 ILITGGAGFIGSHVVRLFVNKYPEYRIINLDKLTYAGNLANLKDIENQPNYVFVKADICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E ++ ++++Q D I++ AAESHVDRSI F TN++GT LL+ +++W L + Sbjct: 68 YEKMQELMQQYQIDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKVYWESLPE- 126 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------------KGLFSEDMPYNPSSP 156 K + RF ISTDEVYG+L+ K F ED YNP SP Sbjct: 127 KYEGKRFYHISTDEVYGALELTHPEGVKPPFTTTASSSEHHLAYGKDFFYEDTKYNPHSP 186 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 187 YSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 246 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSY 275 G+NVRDWLYV DH RA+ ++ G+I E YNIGG NE KNIDI+ + +D L+ K Sbjct: 247 GENVRDWLYVVDHARAIDVIFHNGKIAETYNIGGFNEWKNIDIIKVVINTVDRLLGRKEG 306 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS+K++ E+GW P E G+ KTV WYLDN W Sbjct: 307 EDMDLITYVTDRLGHDMRYAIDSTKLQKELGWEPSLQFEEGIEKTVRWYLDNQEW 361 >gi|229154886|ref|ZP_04283000.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 4342] gi|228628444|gb|EEK85157.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 4342] Length = 323 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ N+D+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNVDVVEQIITLLGKT-------KKDIAYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E+GW PQ E GL +TV WY + WW+PL Sbjct: 285 QKMKNELGWEPQYTFEQGLEETVEWYEHHIEWWKPL 320 >gi|255505534|ref|ZP_05346691.3| dTDP-glucose 4,6-dehydratase [Bryantella formatexigens DSM 14469] gi|255267455|gb|EET60660.1| dTDP-glucose 4,6-dehydratase [Bryantella formatexigens DSM 14469] Length = 368 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 157/338 (46%), Positives = 223/338 (65%), Gaps = 9/338 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +L+++ + ++F++ DI D Sbjct: 11 LVTGGAGFIGSNYIHYMFKKYDNEIRIINVDCLTYAGNLENLRDVEKRENYTFVKADITD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I +E D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 71 SEAITKIFEENDIDRVVHFAAESHVDRSIKNPEVFVRTNVLGTLVMLNAAKAAWELPDGS 130 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +FL +STDEVYGSL+ F E PY+P SPYSA+KASSD LV ++ TY P Sbjct: 131 FRPDKKFLHVSTDEVYGSLENEGEYFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPA 190 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I ++G + +YGDG+NVRDWLYVEDH + + +V +K Sbjct: 191 NITNCSNNYGPYQFPEKLIPLIINNALQGKKLPVYGDGKNVRDWLYVEDHAKGIDMVQEK 250 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+ E YNIGG+NE++NI+I+ I L ++P K+ + LI ++ DR GHDRRY Sbjct: 251 GRLFETYNIGGHNEKQNIEIIHIILDTLKEMLPDDDPRKALVNENLITYVTDRKGHDRRY 310 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AI KI+ E+GW P+ + G+ +T+ WY +N W + Sbjct: 311 AIAPDKIRRELGWEPETMFKDGIRRTIRWYFENEDWMK 348 >gi|301052861|ref|YP_003791072.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis CI] gi|300375030|gb|ADK03934.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus biovar anthracis str. CI] Length = 322 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NI++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIEVVEQIITLLGKT-------EQDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|196037414|ref|ZP_03104725.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus NVH0597-99] gi|196031656|gb|EDX70252.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus NVH0597-99] Length = 322 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ + GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFKQGLQETVQWYEKNEEWWKPLKK 322 >gi|313124558|ref|YP_004034817.1| dtdp-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281121|gb|ADQ61840.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 345 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 230/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK++ F F+++DI Sbjct: 1 MKIIVTGGAGFIGSNFVFYMMKKHPDYKIICLDKLTYAGNLSTLKDVMDKPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R ++ + +YG+GQNVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALDDKPLPVYGEGQNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG +GE YNIGG+NE NIDIV I LD K YS LI + DR GHD+RYA Sbjct: 232 ILEKGTVGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDQRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPTKIHDELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|167648867|ref|YP_001686530.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] gi|167351297|gb|ABZ74032.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] Length = 349 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 158/339 (46%), Positives = 221/339 (65%), Gaps = 3/339 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS+L R + V+ +D LTYAGN +L E+ + + F VDI Sbjct: 1 MKILITGGAGFIGSSLVRSALG-AGHAVVNLDALTYAGNAINLTEVEDAAGYVFEHVDIV 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +PDA+++ AAESHVDRSI G F+ TN++GT +LLE R W L Sbjct: 60 DAAAVDAVFARHRPDAVMHLAAESHVDRSIDGPLAFVRTNVMGTAVLLEAARRHWRGLDP 119 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ FRF+ +STDEVYG+L D F E P +P+SPY+++KA+SD L AW TY +P Sbjct: 120 ERAVAFRFIHVSTDEVYGALGPDDPPFDEHSPIDPTSPYASSKAASDLLARAWQRTYALP 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++++CSNNYGP FPEKLIP I + G + +YGDG+ VRDWL+VEDH AL +L+ Sbjct: 180 VIVTSCSNNYGPRQFPEKLIPTVIHNAVSGQPIPIYGDGRQVRDWLFVEDHAEALLRILE 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE Y IGG E N+D+ I +LD L P + ELI + DRP HDRRYAID+ Sbjct: 240 AGVPGETYLIGGEAEHGNLDLTRAICAILDRLSPTNRPRAELITHVADRPAHDRRYAIDA 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K++ +GW P+ ++E+GL +TV WYLD+ WW+ + + Sbjct: 300 GKLRDALGWRPRTSLEAGLERTVRWYLDHEPWWQEIRAQ 338 >gi|124004207|ref|ZP_01689053.1| dTDP-glucose 4,6-dehydratase [Microscilla marina ATCC 23134] gi|123990277|gb|EAY29776.1| dTDP-glucose 4,6-dehydratase [Microscilla marina ATCC 23134] Length = 349 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 224/333 (67%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS + R VN Q+ +DKLTYAGNL++LK+I Q + + F++ DI Sbjct: 1 MKILITGGAGFIGSHVVRLFVNKYPDYQIFNLDKLTYAGNLDNLKDIEQKSNYHFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ ++ + + D ++ AAESHVDRSIL EF+ TN+IGT LL R W Sbjct: 61 VDQDFVQELYHKHKFDGTIHLAAESHVDRSILNPLEFVQTNVIGTVNLLNAARDIWKENY 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K F +STDEVYGSL ++GLF+E Y+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 121 TNK----LFYHVSTDEVYGSLGNEGLFTESTAYDPHSPYSASKASSDHFVRAYHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++SNCSNNYG Y FPEKLIPL I + + +YG G+NVRDWLYV DH RA+ LV Sbjct: 177 IVISNCSNNYGAYQFPEKLIPLFIHNIKNSKPLPVYGKGENVRDWLYVVDHARAIDLVYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G+ G YNIGG NE KNID++ + ++D + ++ E LI F++DR GHD RYAID Sbjct: 237 QGKQGATYNIGGFNEWKNIDLIRLMCQVMDKKLNQTEGTAEKLIEFVKDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKI E+GW P E G+ T+ WYL+N W Sbjct: 297 ASKINQELGWSPSVTFEQGIELTIDWYLENTQW 329 >gi|260170809|ref|ZP_05757221.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] gi|315919143|ref|ZP_07915383.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] gi|313693018|gb|EFS29853.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] Length = 372 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 166/348 (47%), Positives = 220/348 (63%), Gaps = 21/348 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN ++ +DKLTYAGNL +LK++ ++F++ DICD Sbjct: 6 IIITGGAGFIGSHVVRLFVNKYPDYHIINLDKLTYAGNLANLKDVENKPNYTFVKADICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + K++ D +++ AAESHVDRSI F TN++GT LL+ RL W L + Sbjct: 66 FEMMLKIFKQYHVDGVIHLAAESHVDRSIRDPFTFARTNVLGTLSLLQAARLTWEYLPEG 125 Query: 122 KKDQFRFLQISTDEVYGSLD------------------KGLFSEDMPYNPSSPYSATKAS 163 + + RF ISTDEVYG+L+ F E YNP SPYSA+KA Sbjct: 126 YEGK-RFYHISTDEVYGALELTHPEGKSSEISAHEVYGDEFFKETTKYNPHSPYSASKAG 184 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 SD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG G+NVRDW Sbjct: 185 SDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGKGENVRDW 244 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIR 282 LYV DH RA+ ++ G+I + YNIGG NE KNIDI+ I +D L+ H+E LI Sbjct: 245 LYVVDHARAIDVIFHNGKIADTYNIGGFNEWKNIDIIHVIIKTVDRLLGNPEGHSEGLIT 304 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ DR GHD RYAIDS+K+K+E+GW P E G+ KTV WYLDN W Sbjct: 305 YVMDRMGHDLRYAIDSTKLKNELGWEPSLQFEEGIEKTVQWYLDNQEW 352 >gi|167757833|ref|ZP_02429960.1| hypothetical protein CLOSCI_00164 [Clostridium scindens ATCC 35704] gi|167664487|gb|EDS08617.1| hypothetical protein CLOSCI_00164 [Clostridium scindens ATCC 35704] Length = 353 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 168/340 (49%), Positives = 223/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS ++++ +++ +D LTYAGNL++L + ++ F F++ I Sbjct: 11 MTIIVTGGAGFIGSNFIFHMLDKYPDYRIVCLDCLTYAGNLSTLAPVMENPNFRFVKESI 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E PD IVNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 71 TDREAVYKLFEEEHPDIIVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 123 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA++D LVLA+ TY Sbjct: 124 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 181 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH +A+ L Sbjct: 182 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCKAIDL 241 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YNIGG+NE NIDIV +I K E LI ++EDR GHD RY Sbjct: 242 IIHNGRVGEVYNIGGHNEMTNIDIV--------KIICKELGKPESLITYVEDRKGHDMRY 293 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI SE+GW P+ G+ KT+ WYLDN WW + Sbjct: 294 AIDPTKIHSELGWLPETKFADGIKKTIKWYLDNKEWWETI 333 >gi|78186307|ref|YP_374350.1| dTDP-glucose 4,6-dehydratase [Chlorobium luteolum DSM 273] gi|78166209|gb|ABB23307.1| dTDP-glucose 4,6-dehydratase [Chlorobium luteolum DSM 273] Length = 350 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 225/334 (67%), Gaps = 8/334 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGGAGFIGS + R+ ++ ++ +D LTYAGNL +L+++ + ++FL+ DI Sbjct: 1 MHLLITGGAGFIGSHVVRHFLSAHPDCRITNLDSLTYAGNLANLRDVEDNPRYTFLKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I + + +++ AAESHVDRSI F+ TN+IGT LL+ R W+ Sbjct: 61 TDRGFIDRLFGQTDIEGVIHLAAESHVDRSIADPTAFVMTNVIGTVNLLDAARRHWNGRY 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + RF ISTDEVYGSL+KG +F+E PY+P SPYSA+KASSD+ V A+ TYG+ Sbjct: 121 EGR----RFYHISTDEVYGSLEKGTGMFTETTPYDPHSPYSASKASSDHFVRAYHDTYGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV++SNCSNNYGP+ FPEKLIPL I + + LYG G+NVRDWL+VEDH RA+ ++ Sbjct: 177 PVVISNCSNNYGPFQFPEKLIPLFINNIRNSKPLPLYGKGENVRDWLWVEDHARAIDVIY 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAI 296 +GR G YNIGG+NE NID+V ++ ++D + + +E L+ F+ DR GHD RYAI Sbjct: 237 HRGRDGATYNIGGHNEWSNIDLVRQLCHIMDEKLGRRAGESEKLLTFVTDRAGHDLRYAI 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DSS ++ E+GW P + E GL KTV WYL N W Sbjct: 297 DSSLLQRELGWVPSLSFEEGLQKTVEWYLANEEW 330 >gi|42526949|ref|NP_972047.1| dTDP-glucose 4,6-dehydratase [Treponema denticola ATCC 35405] gi|41817264|gb|AAS11958.1| dTDP-glucose 4,6-dehydratase [Treponema denticola ATCC 35405] Length = 362 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 226/339 (66%), Gaps = 14/339 (4%) Query: 3 LIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQ 56 ++VTGGAGFIGS R L+ + +++ +D LTYAGN SL ++ + + F+ Sbjct: 7 ILVTGGAGFIGSNFIRTLLKKEDAFTGRIINLDALTYAGNAASLADMESEFGGSRYFFIH 66 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +ICD+E I S E+ D +V+FAAESHVDRSILG + F+ TN++GTF LLE + +W Sbjct: 67 GNICDKEIINSIFTEYNIDTVVHFAAESHVDRSILGPEVFLKTNVLGTFNLLETAKQFWK 126 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +D F ISTDEVYGSL +G F E Y+P SPYSA+KASSD+LV A+ HTY Sbjct: 127 KPDGTMRDDVLFHHISTDEVYGSLGTEGYFKETTAYDPRSPYSASKASSDHLVKAYFHTY 186 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +SNCSNNYGP+ FPEKLIPL I M+EG ++ +YGDG+ +RDW++VEDH A+ L Sbjct: 187 GLPATISNCSNNYGPFQFPEKLIPLMILNMLEGKNLPVYGDGKQIRDWIHVEDHNEAVRL 246 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR----FIEDRPGHD 291 +LK GR G+ YNIGG NE +NI ++ + L+ + K+ E +R + DR GHD Sbjct: 247 ILKNGRAGKTYNIGGENEWENIKLLNK---LIQIVCKKTGLEEENVRKTITHVTDRLGHD 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID +KIK+E+ W + E+GL TV WYL+N W Sbjct: 304 RRYAIDCTKIKNELNWKRNFDFETGLENTVDWYLNNKKW 342 >gi|83859878|ref|ZP_00953398.1| dTDP-D-glucose-4,6-dehydratase [Oceanicaulis alexandrii HTCC2633] gi|83852237|gb|EAP90091.1| dTDP-D-glucose-4,6-dehydratase [Oceanicaulis alexandrii HTCC2633] Length = 290 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 158/286 (55%), Positives = 197/286 (68%), Gaps = 4/286 (1%) Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI DR +R+A K PD I + AAE+HVDRSI A +F+TTN+IGTF LLE R W Sbjct: 1 MKGDIRDRHAVRNAFKLADPDVIFHAAAETHVDRSIDAATDFVTTNVIGTFELLEAARDW 60 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K F+ +STDEV+G L D G F E PY PSSPYSATKASSD+LV AW Sbjct: 61 RDTYPERK---VTFVHVSTDEVFGDLHDTGQFDEASPYAPSSPYSATKASSDHLVRAWAR 117 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+ V +SNCSNNYGP FPEKLIPL I +EG + +YGDG VRDWLYV DH RAL Sbjct: 118 TYGLDVRISNCSNNYGPRQFPEKLIPLTILNALEGKPLPVYGDGGQVRDWLYVNDHARAL 177 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ +KG Y +GGN E+ N+++V+ + +LD I K SH ELI F+ DRPGHDRR Sbjct: 178 RLIAEKGEASRTYCVGGNAEQTNLNVVYLLCDILDERIEKPDSHRELITFVSDRPGHDRR 237 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 YAID+S+IK+E+GW P + ++GL KTV WYL + WWRPL + K Sbjct: 238 YAIDASRIKAELGWRPGQTFQAGLKKTVDWYLAHEDWWRPLAQHYK 283 >gi|223985392|ref|ZP_03635457.1| hypothetical protein HOLDEFILI_02763 [Holdemania filiformis DSM 12042] gi|223962637|gb|EEF67084.1| hypothetical protein HOLDEFILI_02763 [Holdemania filiformis DSM 12042] Length = 340 Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 167/336 (49%), Positives = 228/336 (67%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+ +VTGGAGFIG Y+VN + Q++V+D LTYAGNL +L+ I + F F++ DI Sbjct: 1 MKFLVTGGAGFIGGNFAHYMVNTYPEDQIVVLDLLTYAGNLETLEPIMEKPNFKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I E + D +VNFAAE+HVDRS+ + FITTNI+GT +L++ R Sbjct: 61 RDREFIDHLFAEEKFDMVVNFAAETHVDRSVEDPEVFITTNILGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYSA KA +D LV A+ T+ Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSAAKAGADLLVQAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPYHFPEKLIPL I+R + + +YGDG NVRDWL+V DH A+ L Sbjct: 172 KLPVTISRCSNNYGPYHFPEKLIPLMISRALADESLPVYGDGMNVRDWLHVYDHCTAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KGR+GE YNIGG+NE+ N+++V I L+ P+S LI F++DRPGHD RYA Sbjct: 232 ILRKGRVGEVYNIGGHNEKTNLEVVKTILAALNK--PES-----LIHFVKDRPGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D +KI++E+GW P+ E+G+ +T+ WYL + WW Sbjct: 285 MDPTKIETELGWKPKYTFETGIPQTIDWYLTHRDWW 320 >gi|255533492|ref|YP_003093864.1| dTDP-glucose 4,6-dehydratase [Pedobacter heparinus DSM 2366] gi|255346476|gb|ACU05802.1| dTDP-glucose 4,6-dehydratase [Pedobacter heparinus DSM 2366] Length = 350 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 226/332 (68%), Gaps = 7/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R VN+ + +++ +DKLTYAGNL +L +I + F++ DI Sbjct: 3 KILITGGAGFIGSHVVRRFVNNYPQYEIVNLDKLTYAGNLANLTDIEDQPNYRFIKADIT 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I S K+ Q DA+++ AAESHVDRSI F+ TN+IGT LL R +W + Sbjct: 63 NAAEINSLFKKEQFDAVIHLAAESHVDRSISDPIAFVMTNVIGTVNLLNAAREFW----K 118 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D RF +STDEVYG+L + G+F+E Y+P SPYSA+KASSD+ V A+ TYG+ V Sbjct: 119 GAYDSKRFYHVSTDEVYGALGETGMFTETTAYDPHSPYSASKASSDHFVRAYHDTYGLDV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG +HFPEKLIPLAI + V +YG G+NVRDWL+VEDH RA+ ++ + Sbjct: 179 VISNCSNNYGSHHFPEKLIPLAINNIKNNQSVPVYGKGENVRDWLWVEDHARAIDVIFHQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 + GE YNIGG+NE KNID++ + ++D + + + +LI F+ DR GHD RYAIDS Sbjct: 239 AKTGETYNIGGHNEWKNIDLINLLCNIMDKKLGREPGESAKLITFVTDRAGHDLRYAIDS 298 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+++++ W P E GL KTV WYL+N W Sbjct: 299 TKLQNKLDWVPSLQFEEGLEKTVAWYLENEEW 330 >gi|257413523|ref|ZP_04743345.2| dTDP-glucose 4,6-dehydratase [Roseburia intestinalis L1-82] gi|257203265|gb|EEV01550.1| dTDP-glucose 4,6-dehydratase [Roseburia intestinalis L1-82] Length = 373 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 169/363 (46%), Positives = 234/363 (64%), Gaps = 16/363 (4%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +LK+I ++F++ DI D Sbjct: 18 LVTGGAGFIGSNYIHYMFRKYDNEIRIINVDVLTYAGNLENLKDIENRENYTFVRADITD 77 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I E + D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 78 KEAIAKIFAENEIDRVVHFAAESHVDRSIKNPEVFVKTNVLGTAVMLNCAKAAWELPDGS 137 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL D F E PY P SPYSA+KASSD LV A+ TY P Sbjct: 138 FKEGKKFLHVSTDEVYGSLEDDGTYFYETTPYAPHSPYSASKASSDMLVKAYIDTYHFPA 197 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWLYV+DH +A+ +V + Sbjct: 198 NITNCSNNYGPYQFPEKLIPLIINNALHGKKLPVYGDGKNVRDWLYVDDHAKAIDMVQEN 257 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+GE YN+GG+NE++NI+I+ I L ++P ++ +LI ++EDR GHDRRY Sbjct: 258 GRLGETYNVGGHNEKQNIEIINIIIDTLLEMLPADDPRRALVSKDLITYVEDRKGHDRRY 317 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 AI KIK+EIGW P+ + G+ KT+ WY ++ W + + DY K+ +M Sbjct: 318 AIAPDKIKAEIGWEPETMFKEGIKKTIAWYFEHEDWMKNV-----TSGDYQKY--YEDMY 370 Query: 355 CNR 357 NR Sbjct: 371 QNR 373 >gi|291527358|emb|CBK92944.1| dTDP-glucose 4,6-dehydratase [Eubacterium rectale M104/1] Length = 339 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 225/339 (66%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L+ + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLNKYPDYRIVCLDCLTYAGNLSTLEPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +E PD +VNFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 61 TDRDAVYKLFEEEHPDMVVNFAAESHVDRSIENPQVFLDTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KA++D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPIHTSSPYSSSKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGTGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ GR+GE YN+GG+NE+ N++IV I L+ P+S LI F+ DR GHD RYA Sbjct: 232 IIHNGRVGEVYNVGGHNEKTNLEIVKIICKELNK--PES-----LITFVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 285 IDPTKIHNELGWLPETKFEDGIKKTIKWYLDNREWWETI 323 >gi|228932595|ref|ZP_04095474.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827064|gb|EEM72819.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 322 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 165/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|325261287|ref|ZP_08128025.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. D5] gi|324032741|gb|EGB94018.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. D5] Length = 342 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 219/338 (64%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLNKYPDYRIICLDSLTYAGNLSTLAPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + +E PD IVNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDRAAVEKLFEEEHPDMIVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LV+A+ TY Sbjct: 114 --KYGITRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YNIGG+NE KNIDIV +I K E LI ++ DR GHD RY Sbjct: 232 IIHKGRVGEVYNIGGHNEMKNIDIV--------KIICKELGKPESLITYVTDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID +KI E+GW P+ G+ KT+ WYLDN WW Sbjct: 284 AIDPTKIHGELGWLPETKFADGIKKTIQWYLDNKEWWE 321 >gi|291525901|emb|CBK91488.1| dTDP-glucose 4,6-dehydratase [Eubacterium rectale DSM 17629] Length = 339 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 225/339 (66%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L+ + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLNKYPDYRIVCLDCLTYAGNLSTLEPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +E PD +VNFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 61 TDRDAVYKLFEEEHPDIVVNFAAESHVDRSIENPQVFLDTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KA++D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPIHTSSPYSSSKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGTGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ GR+GE YN+GG+NE+ N++IV I L+ P+S LI F+ DR GHD RYA Sbjct: 232 IIHNGRVGEVYNVGGHNEKTNLEIVKIICKELNK--PES-----LITFVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID +KI +E+GW P+ E G+ KT+ WYLDN WW + Sbjct: 285 IDPTKIHNELGWLPETKFEDGIKKTIKWYLDNREWWETI 323 >gi|52144116|ref|YP_082712.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus E33L] gi|51977585|gb|AAU19135.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus E33L] Length = 322 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 168/339 (49%), Positives = 221/339 (65%), Gaps = 20/339 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNL ++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLKNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAID 297 KGRIGE YNIGGNNE+ NID+V +I LL TE I ++ DR GHDRRYAID Sbjct: 232 KGRIGEVYNIGGNNEKTNIDVVEQIITLL--------GKTEKDIEYVTDRLGHDRRYAID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 284 AEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|302875845|ref|YP_003844478.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] gi|307689278|ref|ZP_07631724.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] gi|302578702|gb|ADL52714.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] Length = 351 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 222/332 (66%), Gaps = 10/332 (3%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS Y++ ND+KI + +D LTYAGNL +LK + + + F+Q +IC Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYNDVKI--INVDVLTYAGNLENLKSVENNPNYKFVQANIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I +E + D +VNFAAESHVDRSI + F TN++GT +L + W Sbjct: 63 DKDAITKIFEENEVDYVVNFAAESHVDRSIKNPEIFAETNVLGTVNMLNCAKNSWET-ET 121 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL + G F E P +P SPYS++KA SD +V A+G TY +P+ Sbjct: 122 GWKEGVKFLHVSTDEVYGSLGETGFFMETTPLDPHSPYSSSKAGSDLMVKAYGDTYKMPI 181 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ +V++ Sbjct: 182 NITRCSNNYGPYQFPEKLIPLVINNCLNKKPIPVYGDGMNIRDWLYVEDHCKAIDMVIRD 241 Query: 240 GRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YN+GG+NER N+ IV I ++ D + S LI ++EDR GHDRRY ID Sbjct: 242 GRLGEVYNVGGHNERNNMHIVKTIIEYVHDNV--DSTVDESLITYVEDRKGHDRRYGIDP 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KIK E+GW+P+ E G+ T+ W+LDN W Sbjct: 300 TKIKEELGWYPETPYEEGIKLTIKWFLDNKEW 331 >gi|229183520|ref|ZP_04310744.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BGSC 6E1] gi|228599930|gb|EEK57526.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BGSC 6E1] Length = 322 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYERYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|218902416|ref|YP_002450250.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH820] gi|228913892|ref|ZP_04077517.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926357|ref|ZP_04089429.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944927|ref|ZP_04107288.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120842|ref|ZP_04250084.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus 95/8201] gi|218539784|gb|ACK92182.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH820] gi|228662502|gb|EEL18100.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus 95/8201] gi|228814596|gb|EEM60856.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833181|gb|EEM78746.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845831|gb|EEM90857.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 322 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|307293850|ref|ZP_07573694.1| dTDP-glucose 4,6-dehydratase [Sphingobium chlorophenolicum L-1] gi|306880001|gb|EFN11218.1| dTDP-glucose 4,6-dehydratase [Sphingobium chlorophenolicum L-1] Length = 353 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 215/350 (61%), Gaps = 23/350 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFIG+ Y +V+V+D LTYAGN +L + L + DICD Sbjct: 4 LLITGGAGFIGANFVHYWRKASPGDRVMVLDALTYAGNAANLDGLEAVEL---VVGDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E Q D IV+FAAESHVDRSI G D F+TTN++GT LL+ + W L + Sbjct: 61 TALVTKLLSERQIDTIVHFAAESHVDRSITGPDAFVTTNVVGTHSLLKAAKEVW--LDKG 118 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF +STDEVYGSL D FSE Y P+SPYSA+KA SD+LV A+ HT+G+ Sbjct: 119 TGRPHRFHHVSTDEVYGSLAPDDPAFSETTSYAPNSPYSASKAGSDHLVRAYHHTFGLET 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SNCSNNYGP+ FPEKLIPL + G H+ +YGDG NVRDWL+VEDH R + L+LK Sbjct: 179 TTSNCSNNYGPFQFPEKLIPLFTLNALNGRHLPIYGDGMNVRDWLHVEDHCRGIELILKN 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---------------PKSYSHTELIRFI 284 GR+GE YN+GG E NI +V EI +DA + S +EL ++ Sbjct: 239 GRVGETYNVGGGQELPNIRVVEEICRGVDAAFAHDPDLARRFPNAPAAQGRSSSELKTYV 298 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 EDR GHDRRYAID +KI+SE+G+ P + G +T+ WYL WW PL Sbjct: 299 EDRKGHDRRYAIDETKIRSELGYVPARDFTQGFAETLAWYLAEENWWAPL 348 >gi|300812681|ref|ZP_07093091.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496341|gb|EFK31453.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 345 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 229/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK++ F F+++DI Sbjct: 1 MKIIVTGGAGFIGSNFVFYMMKKHPDYKIICLDKLTYAGNLSTLKDVMDKPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R ++ + +YG GQNVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALDDKPLPVYGGGQNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG +GE YNIGG+NE NIDIV I LD K YS LI + DR GHD+RYA Sbjct: 232 ILEKGTVGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDQRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPTKIHDELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|198282742|ref|YP_002219063.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667293|ref|YP_002424937.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247263|gb|ACH82856.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519506|gb|ACK80092.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 379 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 169/368 (45%), Positives = 231/368 (62%), Gaps = 24/368 (6%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTG AGFIG+ C Y L + ++ +D LTYAGN ++L+ + Q + F F+Q DI Sbjct: 12 RLLVTGAAGFIGANFCHYWLQQHPRATLIALDALTYAGNRHNLEGLEQHSGFRFVQGDIN 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + IV+FAAESHVDRSI D FI TNI+GT LL R W Q Sbjct: 72 DALLVERVMTDHHLNVIVHFAAESHVDRSIHDPDAFIQTNILGTHNLLRIARAVWLDGPQ 131 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF ISTDEVYG+L F E+ PY P+SPY+A+KA +D+LV A+ HTYG+ Sbjct: 132 GWIPH-RFHHISTDEVYGTLGPQDPAFHEETPYAPNSPYAASKAGADHLVRAYRHTYGLS 190 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 SNCSNNYGPYHFPEKLIPL I ++ + +YGDG+ +RDWLYVEDH R + +L+ Sbjct: 191 TTTSNCSNNYGPYHFPEKLIPLIIVNILHNKPLPIYGDGRQIRDWLYVEDHCRGIATILE 250 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHT---------ELIRF 283 +GR GE YNIGG NE NIDIV IG ++D L +++ H+ +LI+ Sbjct: 251 QGREGESYNIGGCNEWANIDIVRLIGEIMDELFAEDPRWLQAFPHSAAAQGRKSADLIQH 310 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 + DRPGHDRRYAID++KI E+G+ P + +G+ +T+ WYL++ WW+ + D Sbjct: 311 VRDRPGHDRRYAIDATKITRELGFKPAVDFPTGIRQTIRWYLEHPQWWQKIM-----DGS 365 Query: 344 YSKWKNLN 351 Y +W ++ Sbjct: 366 YREWLDVQ 373 >gi|183221421|ref|YP_001839417.1| dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911509|ref|YP_001963064.1| dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776185|gb|ABZ94486.1| dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779843|gb|ABZ98141.1| dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 340 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/330 (48%), Positives = 224/330 (67%), Gaps = 7/330 (2%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y L + V+ +DK+TYAGNL++L I +F+ DICD Sbjct: 6 VLVTGSAGFIGSNFVPYFLETHPHVHVVSLDKITYAGNLDNLSSIISEKRHTFVNGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + S + ++ D +V+FAAESHVD SI+ F+ TN+IGTF LL+ W Sbjct: 66 AELVGSLFETYKFDLVVHFAAESHVDNSIINPKIFLETNVIGTFQLLQTAYSTWFSAPFQ 125 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K F +F+ ISTDEV+GSL + G F+ED PY P+SPYSA+KASSD++V ++ HTYG+ Sbjct: 126 RKPGFEAAKFIHISTDEVFGSLGESGFFTEDSPYQPNSPYSASKASSDHIVRSYYHTYGL 185 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P++++NCSNNYGP EKLIP I +E ++ +YG G N+RDWL+V DHV+ + V+ Sbjct: 186 PMIITNCSNNYGPKQHNEKLIPTIIRNALEDKNIPIYGTGMNIRDWLFVMDHVKGIEKVI 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGGNNE N +V I LD +IP+ S++ELI ++ DRPGHD+RYA Sbjct: 246 LYGKLGETYNIGGNNELTNNQVVNVICNHLDKVIPRGNGKSYSELIMYVSDRPGHDKRYA 305 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID++K+K ++ W P+E E+G+ KT+ WYL Sbjct: 306 IDATKMKKDLNWIPEETFETGIVKTIDWYL 335 >gi|47568423|ref|ZP_00239124.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus G9241] gi|47554971|gb|EAL13321.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus G9241] Length = 323 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 221/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPYIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE YNIGGNNE+ N+D+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRIGEVYNIGGNNEKTNVDVVEQIITLLGKT-------KKDIAYVADRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E+GW PQ E GL +TV WY + WW+PL Sbjct: 285 QKMKNELGWEPQYTFEQGLEETVEWYEHHIEWWKPL 320 >gi|229177735|ref|ZP_04305109.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus 172560W] gi|228605699|gb|EEK63146.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus 172560W] Length = 322 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 221/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V+DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVKDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|49477140|ref|YP_035454.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328696|gb|AAT59342.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 322 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 221/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS Y++ + +++ D LTY+GNLN++K I + + F++ +I Sbjct: 1 MNILITGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHSNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPL 320 >gi|257784808|ref|YP_003180025.1| dTDP-glucose 4,6-dehydratase [Atopobium parvulum DSM 20469] gi|257473315|gb|ACV51434.1| dTDP-glucose 4,6-dehydratase [Atopobium parvulum DSM 20469] Length = 355 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 211/332 (63%), Gaps = 6/332 (1%) Query: 4 IVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ + I +L +D LTYAGNL +L E Q ++F VDI D+ Sbjct: 5 LVTGGAGFIGSNFIHYMLKRNQDIHILNVDALTYAGNLENLSEYDQDPRYTFAHVDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + PD ++NFAAESHVDRSI F TN++GT LL +W+ Q Sbjct: 65 EALTQLFEAHHPDYVINFAAESHVDRSIEDPGAFADTNVMGTVALLSVAESFWND-GQGS 123 Query: 123 KDQFRFLQISTDEVYGSLD----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++LQ+STDEVYGSL K F E +P SPYSA+KAS+D V AW TYG P Sbjct: 124 YGDHKYLQVSTDEVYGSLSLDDPKAFFRETTSLSPHSPYSASKASADMFVKAWHDTYGFP 183 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++ CSNNYGPY FPEKLIPL I +E + +YGDG NVRDWLYV+DH +A+ +VL+ Sbjct: 184 AVITRCSNNYGPYQFPEKLIPLMIENCLEHKSLPVYGDGLNVRDWLYVDDHCKAIAMVLE 243 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YNIGG+NER N+ IV I + + + +LI ++ DR GHDRRY I Sbjct: 244 GGRLGEVYNIGGHNERNNLYIVKRIISEVARITGDTQITEDLISYVTDRKGHDRRYGIAP 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIK E+GW+P+ E G+ T+ WYL+N W Sbjct: 304 DKIKEELGWYPETPFEEGIVTTINWYLENRKW 335 >gi|303238677|ref|ZP_07325210.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] gi|302593796|gb|EFL63511.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] Length = 339 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 169/340 (49%), Positives = 222/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS Y++N +++ +D LTYAGNL++LKE ++ F F +VDI Sbjct: 1 MNIIVTGGAGFIGSNFIYYMLNKYPDYRIICVDCLTYAGNLSTLKEALKNPKFRFCKVDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I + +E PD +VNFAAESHVDRSI F+ T+I GT ++++ R Sbjct: 61 RDRKAIYNLFEEEHPDMVVNFAAESHVDRSIENPKVFLDTSINGTAVMMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P SSPYS++KA +D LVL++ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPLYTSSPYSSSKAGADLLVLSYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGKGENVRDWLYVEDHCNAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YNIGG+NE KNIDIV I K +E LI ++ DR GHD RY Sbjct: 232 IIHNGRVGEVYNIGGHNEMKNIDIV--------KTICKELGKSEKLITYVTDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPKTKFTEGIKKTIQWYLDNREWWETI 323 >gi|225025805|ref|ZP_03714997.1| hypothetical protein EUBHAL_00030 [Eubacterium hallii DSM 3353] gi|224956889|gb|EEG38098.1| hypothetical protein EUBHAL_00030 [Eubacterium hallii DSM 3353] Length = 339 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/340 (48%), Positives = 222/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L+ + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFIFHMLNKYPDYRIICLDCLTYAGNLSTLEPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +E PD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDRDAVYKLFEEEHPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YN+GG+NE KNIDIV +I K E LI ++ DR GHD RY Sbjct: 232 IIHNGRVGEVYNVGGHNEMKNIDIV--------KIICKELGKPESLITYVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIQWYLDNKEWWETI 323 >gi|229160277|ref|ZP_04288276.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus R309803] gi|228623238|gb|EEK80065.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus R309803] Length = 323 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQGHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASADMIALSYYKTYQVP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG N+RDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNIRDWLHVTDHCSAIDIVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E+ W P+ E GL +TV WY N WW+PL Sbjct: 285 KKMKNELDWEPKYTFERGLQETVQWYEKNKEWWKPL 320 >gi|255524616|ref|ZP_05391569.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] gi|255511640|gb|EET87927.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] Length = 356 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 6/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y+ I ++ +DKLTYAGNL +LK + + +SF+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFIHYMFKKYSDINIICLDKLTYAGNLKNLKNVGINPNYSFIQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K++ D +VNFAAESHVDRSI + FI TN++GT +LL + W + K Sbjct: 65 GLVEKLFKQYDIDYVVNFAAESHVDRSIADPEIFIKTNVLGTSVLLNVAKKAWEVERRFK 124 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ++LQ+STDEVYGSL++ G F E +P SPYS++K +D V A+ TY +PV + Sbjct: 125 EGK-KYLQVSTDEVYGSLEETGFFMETTALDPHSPYSSSKTGADLWVKAYYDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYG + FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGRFQFPEKLIPLVINNCLNKKPLPVYGDGMNIRDWLYVEDHCKAIDMVINNGR 243 Query: 242 IGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIGG+NER NI I+ I ++ D + P LI F+EDR GHDRRY IDS+K Sbjct: 244 IGEVYNIGGHNERTNIHIIKTIISYIHDNVDPN--VDESLITFVEDRKGHDRRYGIDSTK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK E+GW+P+ E G+ T+ WYLD+ W Sbjct: 302 IKQELGWYPETKFEDGIKMTIEWYLDSKDW 331 >gi|325169023|ref|YP_004285769.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325052898|dbj|BAJ83232.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 352 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 219/336 (65%), Gaps = 3/336 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGG GFIGSA+ R L+ +V+ +DK+TYA + ++L ++ DI D Sbjct: 3 KFLITGGCGFIGSAVVRRLLASAAHEVVTVDKMTYAASEDALGAALGHPRHRLIRADIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R+ + +PD +++ AAESHVDRSI G +FI TNI GTF+LLE R W++ L + Sbjct: 63 AAAMRAVFEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEP 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +FRF ISTDEV+G+L+ G F+E PY+P SPY+A+KA+SD+LV AW HTYG+P Sbjct: 123 ARRRFRFHHISTDEVFGALEPGDPPFTETTPYDPRSPYAASKAASDHLVRAWQHTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SN +NNYGP+ FPEKLIPL + +EG + +YGDG N+RDWL+VEDH AL + Sbjct: 183 IVSNTTNNYGPWQFPEKLIPLVLINALEGRPLPVYGDGSNLRDWLFVEDHAEALVTIALT 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G GE Y IG R N+D+V I LLD P E LI F+ DRPGHD RY ID Sbjct: 243 GTPGETYAIGARQPRSNLDVVRAICRLLDDRRPDPAGPRERLITFVADRPGHDFRYEIDP 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ ++ +GW + E+GL +TV WYL N WWR + Sbjct: 303 ARSEAALGWRAAHDFEAGLARTVDWYLANETWWRAI 338 >gi|206967542|ref|ZP_03228498.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH1134] gi|229043065|ref|ZP_04190795.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH676] gi|229189409|ref|ZP_04316426.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 10876] gi|206736462|gb|EDZ53609.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus AH1134] gi|228594000|gb|EEK51802.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 10876] gi|228726306|gb|EEL77533.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH676] Length = 323 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|294672955|ref|YP_003573571.1| dTDP-glucose 4,6-dehydratase [Prevotella ruminicola 23] gi|294471639|gb|ADE81028.1| dTDP-glucose 4,6-dehydratase [Prevotella ruminicola 23] Length = 378 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 167/355 (47%), Positives = 224/355 (63%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I + F+++DICD Sbjct: 5 IVITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIENKPNYEFVKMDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ + D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 65 FDAFYKLMQDKKVDGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAAKLYWESLPE- 123 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------------KGLFSEDMPYNPSSP 156 K + RF ISTDEVYG+L+ F E YNP SP Sbjct: 124 KYEGKRFYHISTDEVYGALELTHPEGIEPPFTTTASSSEHHLAYGDKFFLETTKYNPHSP 183 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+PV+++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 184 YSASKASSDHFVRAFHDTYGMPVVVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 243 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSY 275 G+NVRDWLYVEDH RA+ ++ +G+I + YNIGG NE KNIDI+ + +D L+ K Sbjct: 244 GENVRDWLYVEDHARAIDVIFHEGKIADTYNIGGFNEWKNIDIIKVVIKTVDRLLGRKEG 303 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI F+ DR GHD RYAIDSSK++ E+GW P E G+ KTV WYLDN W Sbjct: 304 EDMDLITFVTDRAGHDLRYAIDSSKLQKELGWEPSLQFEEGIEKTVRWYLDNQEW 358 >gi|296187052|ref|ZP_06855452.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] gi|296048490|gb|EFG87924.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] Length = 337 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 6/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y+ I ++ +DKLTYAGNL +LK + + +SF+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFIHYMFKKYSDINIICLDKLTYAGNLKNLKNVGINPNYSFIQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K++ D +VNFAAESHVDRSI + FI TN++GT +LL + W + K Sbjct: 65 GLVEKLFKQYDIDYVVNFAAESHVDRSIADPEIFIKTNVLGTSVLLNVAKKAWEVERRFK 124 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ++LQ+STDEVYGSL++ G F E +P SPYS++K +D V A+ TY +PV + Sbjct: 125 EGK-KYLQVSTDEVYGSLEETGFFMETTALDPHSPYSSSKTGADLWVKAYYDTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYG + FPEKLIPL I + + +YGDG N+RDWLYVEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGRFQFPEKLIPLVINNCLNKKPLPVYGDGMNIRDWLYVEDHCKAIDMVINNGR 243 Query: 242 IGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIGG+NER NI I+ I ++ D + P LI F+EDR GHDRRY IDS+K Sbjct: 244 IGEVYNIGGHNERTNIHIIKTIISYIHDNVDPN--VDESLITFVEDRKGHDRRYGIDSTK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK E+GW+P+ E G+ T+ WYLD+ W Sbjct: 302 IKQELGWYPETKFEDGIKMTIEWYLDSKDW 331 >gi|291540645|emb|CBL13756.1| dTDP-glucose 4,6-dehydratase [Roseburia intestinalis XB6B4] Length = 373 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 168/363 (46%), Positives = 234/363 (64%), Gaps = 16/363 (4%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +LK+I ++F++ DI D Sbjct: 18 LVTGGAGFIGSNYIHYMFRKYDNEIRIINVDVLTYAGNLENLKDIENRENYTFVRADITD 77 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I E + D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 78 KEAIAKIFAENEIDRVVHFAAESHVDRSIKNPEVFVKTNVLGTAVMLNCAKAAWELPDGS 137 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL D F E PY P SPYSA+KASSD LV A+ TY P Sbjct: 138 FKEGKKFLHVSTDEVYGSLEDDGTYFYETTPYAPHSPYSASKASSDMLVKAYIDTYHFPA 197 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWLYV+DH +A+ +V + Sbjct: 198 NITNCSNNYGPYQFPEKLIPLIINNALHGKKLPVYGDGKNVRDWLYVDDHAKAIDMVQEN 257 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+GE YN+GG+NE++NI+I+ I L ++P ++ +LI +++DR GHDRRY Sbjct: 258 GRLGETYNVGGHNEKQNIEIINIIIDTLLEMLPADDPRRALVSKDLITYVKDRKGHDRRY 317 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 AI KIK+EIGW P+ + G+ KT+ WY ++ W + + DY K+ +M Sbjct: 318 AIAPDKIKAEIGWEPETMFKEGIKKTIAWYFEHEDWMKNV-----TSGDYQKY--YEDMY 370 Query: 355 CNR 357 NR Sbjct: 371 QNR 373 >gi|166031257|ref|ZP_02234086.1| hypothetical protein DORFOR_00944 [Dorea formicigenerans ATCC 27755] gi|166029104|gb|EDR47861.1| hypothetical protein DORFOR_00944 [Dorea formicigenerans ATCC 27755] Length = 343 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 166/340 (48%), Positives = 221/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS ++++ +++ +D LTYAGNL++L + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFIFHMLDKYPDYRIVCLDCLTYAGNLSTLAPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E PD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDREAVYKLFEEEHPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YN+GG+NE KNIDIV +I K E LI ++ DR GHD RY Sbjct: 232 IIHNGRVGEVYNVGGHNEMKNIDIV--------KMICKELGKPESLITYVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIQWYLDNKEWWETI 323 >gi|330994234|ref|ZP_08318162.1| dTDP-glucose 4-6-dehydratase 2 [Gluconacetobacter sp. SXCC-1] gi|329758701|gb|EGG75217.1| dTDP-glucose 4-6-dehydratase 2 [Gluconacetobacter sp. SXCC-1] Length = 342 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 155/318 (48%), Positives = 202/318 (63%), Gaps = 3/318 (0%) Query: 17 CRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDA 76 R+L+ VL +D LTYA + + + ++S + +I D + EFQPDA Sbjct: 1 MRHLIGQTAHDVLNVDALTYAASTQATQAAAESGRYRLEVANIIDAAAMDRVFAEFQPDA 60 Query: 77 IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEV 136 +++ AAESHVDRSI G F++TNI+GT+ LLE R WWS L ++ FRF ISTDEV Sbjct: 61 VMHLAAESHVDRSIDGPGTFVSTNIVGTYTLLEAARRWWSGLDAARRGAFRFHHISTDEV 120 Query: 137 YGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP 194 +G+L G F+E Y+P SPYSA+KASSD+LV AW HTYG+P ++N +NNYGP+HFP Sbjct: 121 FGALRPGDPPFTEQTAYDPRSPYSASKASSDHLVRAWYHTYGLPTFVTNTTNNYGPWHFP 180 Query: 195 EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNER 254 EKLIPL IEG + +YG GQNVRDWL+VEDH AL ++ G+ GE Y IG R Sbjct: 181 EKLIPLVTINAIEGQELPVYGAGQNVRDWLFVEDHAEALVRAVEHGQPGETYAIGARQPR 240 Query: 255 KNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 N+ +V I +LD L P S H LIR + DRPGHD RY ID S + +GW + + Sbjct: 241 TNMQVVEAICAILDELRPDPSGPHARLIRHVADRPGHDFRYEIDPSHAERALGWRARHDF 300 Query: 314 ESGLNKTVCWYLDNNWWW 331 E G+ +TV WYLDN WW Sbjct: 301 EHGIRRTVQWYLDNREWW 318 >gi|309787871|ref|ZP_07682481.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] gi|308924270|gb|EFP69767.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] Length = 276 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/255 (59%), Positives = 183/255 (71%), Gaps = 10/255 (3%) Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG-- 143 +DRSI G FI TNI+GT++LLE R +WS L DKK+ FRF ISTDEVYG L Sbjct: 1 MDRSITGPAAFIETNIVGTYVLLEAARNYWSALDGDKKNSFRFHHISTDEVYGDLPHPDE 60 Query: 144 --------LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE 195 LF+E Y PSSPYSA+KASSD+LV AW TYG+P +++NCSNNYGPYHFPE Sbjct: 61 VNNKEQLPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPE 120 Query: 196 KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERK 255 KLIPL I +EG + +YG G +RDWLYVEDH RALY+V+ +G+ GE YNIGG+NE+K Sbjct: 121 KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYIVVTEGKAGETYNIGGHNEKK 180 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 NID+V I LLD ++PK S+ E I ++ DRPGHDRRYAID+ KI E+GW PQE ES Sbjct: 181 NIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFES 240 Query: 316 GLNKTVCWYLDNNWW 330 G+ KTV WYL N W Sbjct: 241 GIRKTVGWYLSNTKW 255 >gi|229101901|ref|ZP_04232615.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-28] gi|228681484|gb|EEL35647.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-28] Length = 323 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 163/336 (48%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE +VNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVVVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASADMIALSYYKTYKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V+DH A+ +VL Sbjct: 172 VVVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVKDHCSAIDIVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGRLGEVYNIGGNNEKTNVDVVEQIITLLGKT-------EKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W PQ E GL +TV WY ++ WW+PL Sbjct: 285 HKMKNEFDWEPQYTFEQGLKETVEWYENHIEWWKPL 320 >gi|332293423|ref|YP_004432032.1| dTDP-glucose 4,6-dehydratase [Krokinobacter diaphorus 4H-3-7-5] gi|332171509|gb|AEE20764.1| dTDP-glucose 4,6-dehydratase [Krokinobacter diaphorus 4H-3-7-5] Length = 347 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 167/335 (49%), Positives = 224/335 (66%), Gaps = 7/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R + K + +D LTYAGNL +L ++ S+ ++F++ DI Sbjct: 1 MNILITGGAGFIGSHVVRLFLEVFPKSHIYNLDILTYAGNLENLSDVEASSNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +Q D I++ AAESHVDRSI F+ TNIIGT LL R W Sbjct: 61 NDAPFLMNLFSSYQFDKIIHLAAESHVDRSIKDPLAFVQTNIIGTLNLLNAARSIWK--- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +D + F ISTDEVYGSL + GLF+E Y+P+SPY+A+KASSD+ V A+G TYG+P Sbjct: 118 EDYSSKL-FYHISTDEVYGSLGESGLFTETTSYDPNSPYAASKASSDHFVRAYGETYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP FPEKLIPL I +IEG+ + +YGDG RDWL+V+DH A+ L+ + Sbjct: 177 YIISNCSNNYGPNQFPEKLIPLFINNIIEGTSLPVYGDGNYTRDWLFVKDHAAAIALIFE 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLL-DALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG + E YNIGG NE KNID+V + ++ D L K S LI + +DRPGHD+RYAID Sbjct: 237 KGILKETYNIGGFNEWKNIDLVKLLCDIMDDKLSRKRDSSKSLITYAKDRPGHDKRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++KI+ E+GW P E GL TV WYL+NN W + Sbjct: 297 ATKIEKELGWKPSVTFEEGLELTVNWYLENNQWLK 331 >gi|225164004|ref|ZP_03726291.1| dTDP-glucose 4,6-dehydratase [Opitutaceae bacterium TAV2] gi|224801386|gb|EEG19695.1| dTDP-glucose 4,6-dehydratase [Opitutaceae bacterium TAV2] Length = 344 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 217/332 (65%), Gaps = 7/332 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVND--LKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+L+VTGG GFIGS R + + ++ LV D LTYAGN +L +++ + F+ Sbjct: 1 MKLLVTGGCGFIGSNFIRQRLTEDGSPLRKLVNFDALTYAGNPANLADLASDPRYVFVHG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 +I D + L E DAI+NFAAESHVDRSI FI TN++GT LL T + Sbjct: 61 NIGDDTLVARLLAEHAIDAIINFAAESHVDRSIAAPQPFIETNVVGTLHLLNATLKHYDA 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L D++ FRFL +STDEVYGSL F+E PY P+SPYSA+KA+SD+LV A+ TY Sbjct: 121 LPADRRSTFRFLHVSTDEVYGSLGPQDPPFAEQTPYAPNSPYSASKAASDHLVRAYHRTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PVL NCSNNYGPY EKLIP I ++G + LYGDG +RDW++VED+ A++L Sbjct: 181 DLPVLTVNCSNNYGPYQHSEKLIPRTIINALQGKPITLYGDGLQIRDWIHVEDNTTAIWL 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRR 293 VL+KG IGE YNIGG+NE+ NID+ I +LD + P++ S+ + I + DRPGHDRR Sbjct: 241 VLQKGHIGETYNIGGSNEQTNIDMAKSICSILDRMAPRADRASYAQQITHVTDRPGHDRR 300 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 YAI+ KI+S + W P++N + L +T WYL Sbjct: 301 YAINCEKIRSGLRWIPKKNFTTTLEQTASWYL 332 >gi|315923821|ref|ZP_07920050.1| dTDP-glucose 4,6-dehydratase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622854|gb|EFV02806.1| dTDP-glucose 4,6-dehydratase [Pseudoramibacter alactolyticus ATCC 23263] Length = 343 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 167/337 (49%), Positives = 221/337 (65%), Gaps = 21/337 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIG Y L + +V+ +DKLTYAGNL++L + + F F++ DICD Sbjct: 4 VIITGGAGFIGGNCVHYWLAEHPEDRVICLDKLTYAGNLSTLASVMDNPRFRFVRGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + + +E PD ++NFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 64 RQAVAALFEEEHPDIVINFAAESHVDRSIEDPEIFLRTNIIGTSVLMDACR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 R+ Q+STDEVYG L D+ F+ED P + SSPYSA+KAS+D LVLA+ TYG+ Sbjct: 115 AHGIGRYHQVSTDEVYGDLPLDRPDLFFTEDTPIHTSSPYSASKASADLLVLAYHRTYGL 174 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +S CSNNYGPYHFPEKLIPL I + + +YG+G+NVRDWLYV DH A+ ++ Sbjct: 175 PVSISRCSNNYGPYHFPEKLIPLMIANALADKPLPVYGEGENVRDWLYVADHCAAIDRIV 234 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 GR+GE YN+GG+NE +NIDIV I L P+S LI + DR GHDRRYAID Sbjct: 235 HDGRVGEVYNVGGHNEMRNIDIVRLICQKLGK--PES-----LITHVADRKGHDRRYAID 287 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI SE+GW P + G+ KT+ WYL + WW + Sbjct: 288 PTKIHSELGWLPATSFAEGIEKTIDWYLTHRDWWEAI 324 >gi|30261325|ref|NP_843702.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Ames] gi|47526495|ref|YP_017844.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184157|ref|YP_027409.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Sterne] gi|165872850|ref|ZP_02217476.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0488] gi|167636134|ref|ZP_02394439.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0442] gi|167641183|ref|ZP_02399437.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0193] gi|170708883|ref|ZP_02899317.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0389] gi|177654446|ref|ZP_02936343.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0174] gi|190569136|ref|ZP_03022034.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis Tsiankovskii-I] gi|227815934|ref|YP_002815943.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. CDC 684] gi|229600607|ref|YP_002865746.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0248] gi|254725411|ref|ZP_05187193.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A1055] gi|254734031|ref|ZP_05191745.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Western North America USA6153] gi|254740822|ref|ZP_05198511.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Kruger B] gi|254753665|ref|ZP_05205701.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Vollum] gi|254758762|ref|ZP_05210789.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Australia 94] gi|30255179|gb|AAP25188.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Ames] gi|47501643|gb|AAT30319.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178084|gb|AAT53460.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Sterne] gi|164711427|gb|EDR16978.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0488] gi|167510824|gb|EDR86216.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0193] gi|167528488|gb|EDR91253.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0442] gi|170126199|gb|EDS95092.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0389] gi|172080730|gb|EDT65812.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0174] gi|190559719|gb|EDV13706.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis Tsiankovskii-I] gi|227007710|gb|ACP17453.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. CDC 684] gi|229265015|gb|ACQ46652.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. A0248] Length = 322 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAI++ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAINA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|332877116|ref|ZP_08444867.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685006|gb|EGJ57852.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 384 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 225/356 (63%), Gaps = 30/356 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 11 IIITGGAGFIGSHVVRLFVNQYPDYHIINLDKLTYAGNLANLKDIEDRPNYTFVKADICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++++ D I++ AAESHVDRSI F TN++GT LL+ + +W L + Sbjct: 71 FDKMSELIRQYHVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKEYWESLPEG 130 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------------KGLFSEDMPYNPSSP 156 + + RF ISTDEVYG+L+ + F E YNP SP Sbjct: 131 YEGK-RFYHISTDEVYGALELTHPEGIEPPFTTTASSSEHHLAYGEAFFLETTKYNPHSP 189 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 190 YSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 249 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKS 274 G+NVRDWLYV DH RA+ ++ KG++ E YNIGG NE KNIDI+ + +D L+ P+ Sbjct: 250 GENVRDWLYVIDHARAIDVIFHKGKVAETYNIGGFNEWKNIDIIKVVIRTVDRLLGHPEG 309 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YS +LI ++ DR GHD RYAIDS+K+K E+GW P E G+ KTV WYLDN W Sbjct: 310 YS-LDLITYVTDRKGHDLRYAIDSTKLKDELGWEPSLQFEEGIEKTVRWYLDNQEW 364 >gi|86144027|ref|ZP_01062365.1| dTDP-D-glucose 4,6-dehydratase [Leeuwenhoekiella blandensis MED217] gi|85829487|gb|EAQ47951.1| dTDP-D-glucose 4,6-dehydratase [Leeuwenhoekiella blandensis MED217] Length = 348 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 219/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS + R +++N ++ +D LTYAGNL ++ +I + F++ DI Sbjct: 1 MKILITGGAGFIGSHVVRRFVLNYPNYEIYNLDALTYAGNLENIADIENQANYHFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I +E Q D +V+ AAESHVDRSI F+ TN++GT LL T+ W Sbjct: 61 TDAAFIDQLFQEQQFDGVVHLAAESHVDRSIKDPLAFVKTNVLGTMNLLNATKAIWEHNY 120 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF +STDEVYG+L +GLF+E Y+P+SPYSA+KASSD+ V A+G TYG+P Sbjct: 121 AGK----RFYHVSTDEVYGALGAEGLFTETTAYDPNSPYSASKASSDHFVRAYGETYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP HFPEKLIPL I +I + +YGDG RDWLYV DH RA+ LV Sbjct: 177 YVITNCSNNYGPNHFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLYVIDHARAIDLVFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG + E YNIGG NE KNID+V + +D + + +E LI F++DRPGHD RYAID Sbjct: 237 KGELAETYNIGGFNEWKNIDLVKLLCEQMDLKLGREEGTSEQLITFVKDRPGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKI E+GW P E GL +T+ WY DN W Sbjct: 297 ASKINKELGWEPSVTFEEGLKQTIDWYFDNPEW 329 >gi|65318593|ref|ZP_00391552.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Bacillus anthracis str. A2012] Length = 322 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAI++ Sbjct: 232 KGRVGEVYNIGGNNEKXNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAINA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|87201247|ref|YP_498504.1| dTDP-glucose 4,6-dehydratase [Novosphingobium aromaticivorans DSM 12444] gi|87136928|gb|ABD27670.1| dTDP-glucose 4,6-dehydratase [Novosphingobium aromaticivorans DSM 12444] Length = 352 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 217/350 (62%), Gaps = 23/350 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG Y ++V+D LTYAGN +++ + Q+ L + DI D Sbjct: 4 LLVTGGAGFIGGNFVHYWAQQHPDDTIVVLDCLTYAGNRSTIAGVEQAEL---VVGDIRD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+E +V+FAAESHVDRSI G D FI TNI+GT LL+ R W L + Sbjct: 61 TDLVEKLLRERDIATLVHFAAESHVDRSITGPDAFIETNILGTNSLLKAARKVW--LDEG 118 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF ISTDEVYGSL FSE Y P+SPYSA+KA+SD+LV A+ HTYG+ V Sbjct: 119 SGRAHRFHHISTDEVYGSLGPSDPAFSETTQYQPNSPYSASKAASDHLVRAYHHTYGLDV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +NCSNNYGPYH+PEKLIPL I + G + +YGDG NVRDWLYVEDH R + LK Sbjct: 179 TTTNCSNNYGPYHYPEKLIPLFILNALSGKPLPIYGDGMNVRDWLYVEDHCRGIEAALKN 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEI------GFL---------LDALIPKSYSHTELIRFI 284 G+ GE YNIGG E N+ ++ I F+ DA K + +EL F+ Sbjct: 239 GKAGETYNIGGGEELPNMAVIDRICAEVDRAFVEVEGLAERYPDAPAAKGRATSELKTFV 298 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 EDR GHDRRYAID +K ++E+G+ PQ + E+GL T+ WY DN WWRPL Sbjct: 299 EDRKGHDRRYAIDETKARAELGYVPQHDFETGLRGTLRWYFDNEAWWRPL 348 >gi|291534626|emb|CBL07738.1| dTDP-glucose 4,6-dehydratase [Roseburia intestinalis M50/1] Length = 360 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 168/363 (46%), Positives = 234/363 (64%), Gaps = 16/363 (4%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +LK+I ++F++ DI D Sbjct: 5 LVTGGAGFIGSNYIHYMFRKYDNEIRIINVDVLTYAGNLENLKDIENRENYTFVRADITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I E + D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 65 KEAIAKIFAENEIDRVVHFAAESHVDRSIKNPEVFVKTNVLGTAVMLNCAKAAWELPDGS 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ +FL +STDEVYGSL D F E PY P SPYSA+KASSD LV A+ TY P Sbjct: 125 FKEGKKFLHVSTDEVYGSLEDDGTYFYETTPYAPHSPYSASKASSDMLVKAYIDTYHFPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGPY FPEKLIPL I + G + +YGDG+NVRDWLYV+DH +A+ +V + Sbjct: 185 NITNCSNNYGPYQFPEKLIPLIINNALHGKKLPVYGDGKNVRDWLYVDDHAKAIDMVQEN 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRY 294 GR+GE YN+GG+NE++NI+I+ I L ++P ++ +LI +++DR GHDRRY Sbjct: 245 GRLGETYNVGGHNEKQNIEIINIIIDTLLEMLPADDPRRALVSKDLITYVKDRKGHDRRY 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 AI KIK+EIGW P+ + G+ KT+ WY ++ W + + DY K+ +M Sbjct: 305 AIAPDKIKAEIGWEPETMFKEGIKKTIAWYFEHEDWMKNV-----TSGDYQKY--YEDMY 357 Query: 355 CNR 357 NR Sbjct: 358 QNR 360 >gi|149278940|ref|ZP_01885074.1| dTDP-D-glucose 4,6-dehydratase [Pedobacter sp. BAL39] gi|149230219|gb|EDM35604.1| dTDP-D-glucose 4,6-dehydratase [Pedobacter sp. BAL39] Length = 350 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 160/332 (48%), Positives = 222/332 (66%), Gaps = 7/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R VN+ Q++ +DKLTYAGNL +L +I + F++ DI Sbjct: 3 KILITGGAGFIGSHVVRRFVNEYPDYQIVNLDKLTYAGNLANLTDIEDRPNYRFVKADIT 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + DA+++ AAESHVDRSI F+ TN+IG+ LL R +W Sbjct: 63 DAPRINELFLQENFDAVIHLAAESHVDRSITDPSAFVMTNVIGSVNLLNAAREYWKGSYA 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L ++G+F+E Y+P SPYSA+KASSD+ V A+ TYG+ V Sbjct: 123 GK----RFYHVSTDEVYGALSEEGMFTEQTAYDPHSPYSASKASSDHFVRAYHDTYGLDV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG +HFPEKLIPLAI + G V +YG G+NVRDWL+VEDH RA+ ++ + Sbjct: 179 VISNCSNNYGSHHFPEKLIPLAINNIKNGQPVPVYGKGENVRDWLWVEDHARAIDVIFHQ 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 + GE YNIGG+NE KNID++ + ++D + ++ + +LI F+ DR GHD RYAIDS Sbjct: 239 AKTGETYNIGGHNEWKNIDLIHLLCRIMDKKLGRAEGESAKLITFVTDRAGHDLRYAIDS 298 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K++ + W P E GL KTV WYL+N W Sbjct: 299 TKLQQVLNWVPSLQFEEGLEKTVDWYLENEEW 330 >gi|295693598|ref|YP_003602208.1| dtdp-glucose 4,6-dehydratase [Lactobacillus crispatus ST1] gi|295031704|emb|CBL51183.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus ST1] Length = 345 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 185/363 (50%), Positives = 236/363 (65%), Gaps = 28/363 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFIFYMMKKHPDYEIICLDKLTYAGNLSTLKSVLDKPNFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G+ GE YNIGG+NE NI+IV I LD K YS LI + DR GHDRRYA Sbjct: 232 ILENGKPGEIYNIGGHNEMHNIEIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSC 355 ID KI SE+GW P+ + G+ KT+ WYLDN WW + DY + EM Sbjct: 285 IDPDKIHSELGWLPETMFKDGIKKTIQWYLDNKEWWENIIS-----GDYQNY--YEEMYG 337 Query: 356 NRK 358 NRK Sbjct: 338 NRK 340 >gi|303238693|ref|ZP_07325226.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] gi|302593812|gb|EFL63527.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] Length = 364 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 164/339 (48%), Positives = 229/339 (67%), Gaps = 16/339 (4%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS ++N I+++ +D LTYAGNL +LK + ++F++ DICD Sbjct: 5 LVTGGAGFIGSNFIHCMINKYGNSIRIINVDLLTYAGNLENLKGLENKENYTFIKADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ I K + D +VNFAAESHVDRSI + F+ TN++GT LL + +W + Sbjct: 65 KDKIEEIFKNNEIDYVVNFAAESHVDRSIKDPEVFVRTNVLGTQCLLNIAKNYW----EK 120 Query: 122 KKDQF----RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + D F +FLQ+STDEVYGSL+ +G F+E+ P +P SPYSA+KA++D +V A+ TY Sbjct: 121 EDDTFLPGKKFLQVSTDEVYGSLEHEGYFTENTPLDPHSPYSASKAAADMIVKAYFDTYK 180 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYG Y FPEKLIPL I ++ G + +YGDG+N+RDWLYVEDH A+ V Sbjct: 181 MPVNITRCSNNYGRYQFPEKLIPLVINNVLSGKELPVYGDGKNIRDWLYVEDHCLAIDQV 240 Query: 237 LKKGRIGERYNIGGNNERKN----IDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHD 291 + G++GE YNIGG+NER+N I+ + LD P +++ ELI+F++DR GHD Sbjct: 241 INNGKLGEVYNIGGHNERQNIEIIKTIIKTVQNTLDESDPRRNHISDELIKFVKDRKGHD 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RRYAID +KI SEIGW P+ E G+ +T+ WYL N W Sbjct: 301 RRYAIDPAKISSEIGWLPETAFEQGIVETIKWYLKNAKW 339 >gi|229095803|ref|ZP_04226782.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-29] gi|228687636|gb|EEL41535.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-29] Length = 323 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 223/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSLQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE +VNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVVVNFAAESHVDRSIEDPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASADMIALSYYKTYKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG ++ LYGDG NVRDWL+V+DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKNLPLYGDGLNVRDWLHVKDHCSAIDIVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGRLGEVYNIGGNNEKTNVDVVEQIITLLGKT-------EKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W PQ E GL +TV WY ++ WW+PL Sbjct: 285 HKMKNEFDWEPQYTFEQGLKETVEWYENHIEWWKPL 320 >gi|229090265|ref|ZP_04221510.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-42] gi|228693045|gb|EEL46761.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-42] Length = 322 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 221/338 (65%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHSNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P+SPYS++KAS+D + LA+ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGRFTEETSLAPNSPYSSSKASADMIALAYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+K+E W P+ E GL +TV WY N WW+PL K Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNEEWWKPLKK 322 >gi|229068876|ref|ZP_04202170.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus F65185] gi|229078513|ref|ZP_04211073.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock4-2] gi|228704829|gb|EEL57255.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock4-2] gi|228714160|gb|EEL66041.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus F65185] Length = 322 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLLDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERNVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|325954256|ref|YP_004237916.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] gi|323436874|gb|ADX67338.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] Length = 348 Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 158/331 (47%), Positives = 220/331 (66%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +TGGAGFIGS + R +L ++ ID LTYAGNL +LK++ + F +VDI D Sbjct: 4 IFITGGAGFIGSHVVREFLQKHPNYTIVNIDALTYAGNLENLKDVEHHPNYRFEKVDIVD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + +QPD +++ AAESHVDRSI +F+ TN+IGT LL + W Q+ Sbjct: 64 AKAVNALFERYQPDGVIHLAAESHVDRSISNPIDFVMTNVIGTVNLLNAAKATW----QN 119 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF +STDEVYG+L + G F+E+ Y+P SPYSA+KASSD+ V A+ TYG+P++ Sbjct: 120 DYSGKRFHHVSTDEVYGTLGETGYFTEETSYDPHSPYSASKASSDHFVRAYHDTYGLPIV 179 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGP HFPEKLIPL I ++ + +YGDG+ RDWLYV DH +A+ LV +G Sbjct: 180 ITNCSNNYGPNHFPEKLIPLCIHNILNKKPLPIYGDGKYTRDWLYVIDHAKAIDLVFHEG 239 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + G+ YNIGG NE NID+V E+ +D + + +E LI F++DRPGHD RYAID++ Sbjct: 240 KTGKAYNIGGFNEWTNIDLVKELCRQMDEKLGREKGESEKLITFVKDRPGHDLRYAIDAT 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P E GL+ T+ W+L N W Sbjct: 300 KINKELGWKPSVTFEEGLSATIDWFLANQEW 330 >gi|218259908|ref|ZP_03475433.1| hypothetical protein PRABACTJOHN_01094 [Parabacteroides johnsonii DSM 18315] gi|218224853|gb|EEC97503.1| hypothetical protein PRABACTJOHN_01094 [Parabacteroides johnsonii DSM 18315] Length = 379 Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 169/357 (47%), Positives = 224/357 (62%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ L I+++V+D LTYAGNL ++ E F++ DICDR Sbjct: 5 LVTGAAGFIGANFIKYMLAKYLGIKIVVLDLLTYAGNLGTIAEDIDGERCEFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++Q D +VNFAAESHVDRSI F+ TNI+GT LL+ R W Sbjct: 65 ALTDGLFAKYQFDYVVNFAAESHVDRSIENPQLFLVTNILGTQNLLDSARKAWVTGKAAT 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPEWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVQAYSETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ LV Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKPLPVYGDGTNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + KGR GE YN+GG+NE++NI+IV E+G D I Sbjct: 245 IHKGRAGEVYNVGGHNEKQNIEIVKLTISTIRRLMTEQPEYRQVLKKKEMG--ADGQISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ + E G+ KT+ WYLDN W Sbjct: 303 DWINESLITFVKDRLGHDQRYAIDPTKITNELGWTPETSFEIGIVKTIRWYLDNQKW 359 >gi|283798825|ref|ZP_06347978.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] gi|291073512|gb|EFE10876.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] Length = 340 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 172/337 (51%), Positives = 233/337 (69%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYQIVNLDLLTYAGNLETLKPVEGKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I +E +PD +VNFAAESHVDRSI + F+ TN++GT LL+ +C Sbjct: 61 ADRKFIFDLFREEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLD------ACKE 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 115 FGIK---RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YGDG NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEELPVYGDGANVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+ +V I LD P+S LIR+++DRPGHDRRYA Sbjct: 232 IIHKGRVGEVYNIGGHNERTNLQVVKTILKALDK--PES-----LIRYVKDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIETELGWKPKYNFDTGIAQTIQWYLDNEDWWK 321 >gi|212690670|ref|ZP_03298798.1| hypothetical protein BACDOR_00157 [Bacteroides dorei DSM 17855] gi|265754343|ref|ZP_06089532.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] gi|212666770|gb|EEB27342.1| hypothetical protein BACDOR_00157 [Bacteroides dorei DSM 17855] gi|263235052|gb|EEZ20607.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] Length = 379 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 228/355 (64%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHDDIRVVVLDALTYAGNLGTIASDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 DLADQLFAEYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKDVRYHQVSTDEVYGSLGAEGFFTETTPLCPHSPYSASKTSADMIVMAYRDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG+NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGKNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 L+KGR GE YN+GG+NE++NI+IV + ++ ++ + + Sbjct: 245 LRKGREGEVYNVGGHNEKENIEIVKLTIATIHRMMTETPEYRKILKKKELNDKGEISIDW 304 Query: 280 ----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID +KI +E+GW+P+ E+G+ KT+ WYL+N W Sbjct: 305 INESLITFVKDRLGHDQRYAIDPTKITNELGWYPETKFETGIVKTIQWYLENQAW 359 >gi|325281624|ref|YP_004254166.1| dTDP-glucose 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] gi|324313433|gb|ADY33986.1| dTDP-glucose 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] Length = 354 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 219/332 (65%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V + ++ +DKLTYAGNL +L +I Q ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVTKYPEYHIINLDKLTYAGNLANLADIEQQPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I ++ D +++ AAESHVDRSI F TN++GT LL+ ++ W Sbjct: 67 FEKILELFRQHSIDGVIHLAAESHVDRSIKDPFTFAQTNVMGTLSLLQAAKVSWDG---- 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D RF ISTDEVYG+L D F+E Y+P SPYSA+KASSD+ V A+ T+G+P Sbjct: 123 QYDGKRFYHISTDEVYGALKFDGTFFTETTKYDPHSPYSASKASSDHFVRAFHDTFGMPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++NCSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYV DH RA+ L+ Sbjct: 183 LVTNCSNNYGPYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLYVVDHARAIDLIFHN 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G++ E YNIGG NE KNID++ + +D L+ + +E LI ++ DR GHD RYAIDS Sbjct: 243 GKVAETYNIGGFNEWKNIDLIRVLIKTVDRLLGRPEGASEKLITYVTDRAGHDLRYAIDS 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +K+K+E+GW P E G+ KTV WYLDN W Sbjct: 303 TKLKNELGWEPSLQFEEGIEKTVKWYLDNQEW 334 >gi|34541216|ref|NP_905695.1| dTDP-glucose 4,6-dehydratase [Porphyromonas gingivalis W83] gi|188994413|ref|YP_001928665.1| dTDP-glucose 4,6-dehydratase [Porphyromonas gingivalis ATCC 33277] gi|34397532|gb|AAQ66594.1| dTDP-glucose 4,6-dehydratase [Porphyromonas gingivalis W83] gi|47080242|dbj|BAD18851.1| dTDP-glucose 4,6-dehydratase [Porphyromonas gingivalis] gi|188594093|dbj|BAG33068.1| dTDP-glucose 4,6-dehydratase [Porphyromonas gingivalis ATCC 33277] Length = 354 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 221/333 (66%), Gaps = 8/333 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS + R +VN +++ +D LTYAGNL +LK+I + F++ DIC Sbjct: 6 HILITGGAGFIGSHVVRLMVNAYPDYEIINLDTLTYAGNLANLKDIESKPNYRFVKADIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + D +++ AAESHVDRSI F TN++GT LL+ + W + Sbjct: 66 NANTLKKVFAHYAIDGVIHLAAESHVDRSIKDPLAFARTNVMGTLTLLQTAKEAWHGEYE 125 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG+L D LF+E+ Y+P SPYSA+KASSD+ V A+ T+G+P Sbjct: 126 GK----RFYHISTDEVYGALAFDGTLFTEETKYDPHSPYSASKASSDHFVRAYHDTFGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L+ Sbjct: 182 TVISNCSNNYGPYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLYVEDHARAIDLIFH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G+ G+ YNIGG NE KNID++ + ++D L+ + +E LI ++ DR GHD RYAID Sbjct: 242 RGKNGDTYNIGGFNEWKNIDLIKVMIRVVDRLLGREEGSSEKLITYVADRAGHDLRYAID 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K+K+E+GW P E G+ KTV WYL N W Sbjct: 302 STKLKNELGWEPSLQFEEGIEKTVRWYLHNQDW 334 >gi|229143929|ref|ZP_04272346.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST24] gi|296501910|ref|YP_003663610.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis BMB171] gi|228639492|gb|EEK95905.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST24] gi|296322962|gb|ADH05890.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis BMB171] Length = 322 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLLDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|30019367|ref|NP_830998.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 14579] gi|229126628|ref|ZP_04255640.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-Cer4] gi|29894910|gb|AAP08199.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus ATCC 14579] gi|228656568|gb|EEL12394.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-Cer4] Length = 323 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLLDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|150002896|ref|YP_001297640.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|254884456|ref|ZP_05257166.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|294778171|ref|ZP_06743602.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|319642411|ref|ZP_07997063.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_40A] gi|149931320|gb|ABR38018.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|254837249|gb|EET17558.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|294448030|gb|EFG16599.1| dTDP-glucose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|317385941|gb|EFV66868.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_40A] Length = 379 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 228/355 (64%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHDDIRVVVLDALTYAGNLGTIASDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 DLADQLFSEYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKDVRYHQVSTDEVYGSLGAEGFFTETTPLCPHSPYSASKTSADMIVMAYRDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG+NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGKNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 L+KGR GE YN+GG+NE++NI+IV + ++ ++ + + Sbjct: 245 LRKGREGEVYNVGGHNEKENIEIVKLTIATIHRMMTETPEYRKILKKKELNDKGEISIDW 304 Query: 280 ----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID +KI +E+GW+P+ E+G+ KT+ WYL+N W Sbjct: 305 INESLITFVKDRLGHDQRYAIDPTKITNELGWYPETKFETGIVKTIQWYLENQAW 359 >gi|326798472|ref|YP_004316291.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium sp. 21] gi|326549236|gb|ADZ77621.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium sp. 21] Length = 346 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 223/333 (66%), Gaps = 8/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +I+TGGAGFIGS + R VN+ + ++ +DKLTYAGNL +L +I + F++ DI Sbjct: 1 MNIIITGGAGFIGSHVVRRFVNNYPQYHIINLDKLTYAGNLANLSDIEDQVNYEFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I + +PDA+++ AAESHVDRSI +F+ TN++GT LL R W S Sbjct: 61 TDAAFINELFERVKPDAVIHLAAESHVDRSISNPLDFVLTNVVGTVNLLNAARKCWEGDS 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF +STDEVYG+L + G+F+E+ Y+P SPYSA+KASSD+ V A+ TYG+ Sbjct: 121 SK-----RFYHVSTDEVYGALGESGMFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLN 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYG +HFPEKLIPLAI + V +YG G+NVRDWL+VEDH RA+ ++ Sbjct: 176 TVISNCSNNYGSHHFPEKLIPLAIHNIKNNKPVPVYGKGENVRDWLWVEDHARAIDVIFH 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 + + G+ YNIGG+NE KNID++ + ++D + + + +LI F++DR GHD RYAID Sbjct: 236 QAKAGDTYNIGGHNEWKNIDLIRLLCNIMDRKLGRPAGESAKLITFVKDRAGHDLRYAID 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K++ ++GW P E GL KTV WYL N W Sbjct: 296 STKLQKDLGWVPSLQFEEGLEKTVDWYLANEDW 328 >gi|229114754|ref|ZP_04244168.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock1-3] gi|228668819|gb|EEL24247.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock1-3] Length = 323 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSLQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE +VNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVVVNFAAESHVDRSIEDPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASADMIALSYYKTYKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V+DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVKDHCSAIDIVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGRLGEVYNIGGNNEKTNVDVVEQIITLLGKT-------EKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W PQ E GL +TV WY ++ WW+PL Sbjct: 285 HKMKNEFDWEPQYTFEQGLKETVEWYENHIEWWKPL 320 >gi|317132490|ref|YP_004091804.1| dTDP-glucose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] gi|315470469|gb|ADU27073.1| dTDP-glucose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] Length = 339 Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 163/339 (48%), Positives = 230/339 (67%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y++ N + ++L +D LTYAGNL +L ++ F F++ DI Sbjct: 1 MKILVTGGAGFIGSNFVYYMLENHPEDEILCLDLLTYAGNLQTLDGAMKNPHFRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ +PD +VNFAAESHVDRSI F+ TNI+GT +L++ +R Sbjct: 61 ADRAFVFDLFRKEKPDMVVNFAAESHVDRSIENPGIFLQTNILGTGVLMDASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ QISTDEVYG L D+ +F+E+ P + SSPYS++KA +D L LA+ T+ Sbjct: 114 --EVGVQRYHQISTDEVYGDLPLDRPDLMFTEETPLHTSSPYSSSKAGADLLALAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPYHFPEKLIPL ITR ++ + +YG G NVRDWLYV DH A+ L Sbjct: 172 GLPVTITRCSNNYGPYHFPEKLIPLIITRALDDQTIPVYGTGANVRDWLYVGDHCSAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL+KG++GE YN+GG+NER N+D+V + L + P+S LI ++ DR GHDRRYA Sbjct: 232 VLRKGKVGEVYNVGGHNERSNLDVVKTV--LRELGKPES-----LITYVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID +KI++E+GW P + G+ TV WYL++ WW+ + Sbjct: 285 IDPTKIETELGWQPTYRFDEGIKVTVAWYLEHKDWWQTI 323 >gi|300728484|ref|ZP_07061843.1| dTDP-glucose 4,6-dehydratase [Prevotella bryantii B14] gi|299774202|gb|EFI70835.1| dTDP-glucose 4,6-dehydratase [Prevotella bryantii B14] Length = 389 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 166/363 (45%), Positives = 228/363 (62%), Gaps = 35/363 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I +SF++ DICD Sbjct: 7 IIITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIENKPNYSFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL--- 118 + + + +++ D I++ AAESHVDRSI F TN++GT LL+ +L+W L Sbjct: 67 FDKMYALMQKEHVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKLYWESLPTP 126 Query: 119 -----SQDKKDQFRFLQISTDEVYGSLD-------------------------KGLFSED 148 SQ + ++ F ISTDEVYG+L+ + F+ED Sbjct: 127 YMFSSSQGELERVLFYHISTDEVYGALEMTHPEGIPAPFTTKASSGKNHEAYGEDFFTED 186 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 + Y P SPYSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + Sbjct: 187 LKYMPHSPYSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHR 246 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 + +YG G+NVRDWLYVEDH RA+ ++ KG I + YNIGG NE KNIDI+ + +D Sbjct: 247 KPLPVYGKGENVRDWLYVEDHARAIDVIFHKGNIADTYNIGGFNEWKNIDIIKVVINTVD 306 Query: 269 ALIPKSYSH-TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 L+ + +LI ++ DR GHD+RYAIDS K+++E+GW P E G+ KTV WYLDN Sbjct: 307 RLLGRQEGEDMDLITYVTDRLGHDKRYAIDSRKLQAELGWEPSLQFEEGIEKTVKWYLDN 366 Query: 328 NWW 330 W Sbjct: 367 QEW 369 >gi|291546735|emb|CBL19843.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. SR1/5] Length = 344 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 167/340 (49%), Positives = 219/340 (64%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +++ +D LTYAGNL++L + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFIFHMMEAHPDYRIVCLDCLTYAGNLSTLAPVMDKPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +E PD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDRDAVYKLFEEEHPDIVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LVLA+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGKGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE KNIDIV LI K E LI + DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEMKNIDIV--------KLICKELGKPESLITHVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIKWYLDNKEWWETI 323 >gi|218280965|ref|ZP_03487555.1| hypothetical protein EUBIFOR_00113 [Eubacterium biforme DSM 3989] gi|218217736|gb|EEC91274.1| hypothetical protein EUBIFOR_00113 [Eubacterium biforme DSM 3989] Length = 344 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 162/337 (48%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y+VN ++V +DKLTYAGNL + K + + F++ DI Sbjct: 1 MKILVTGGAGFIGGNFVHYMVNKYPEDMIVNLDKLTYAGNLETCKPVEDKPNYKFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I ++ + D +VNFAAESHVDRSI + F+ TN++GT LL+ +C+ Sbjct: 61 ADREFIMDLFEKEKFDVVVNFAAESHVDRSIEDPEIFVKTNVMGTTTLLD------ACVK 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYG L D+ F+E+ P + SSPYS+ KAS+D VLA+ TY Sbjct: 115 YGIQ---RYHQVSTDEVYGDLPLDRPDLFFTENTPLHTSSPYSSAKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLIISRALNDETIPVYGTGENVRDWLHVYDHCVAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KGR+GE YN+GG+NER N+++V + L+ P+S LI F+ DR GHD RYA Sbjct: 232 IVRKGRVGEVYNVGGHNERTNLEVVKTVLHALNK--PES-----LITFVTDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ ++G+ T+ WYLDN WW Sbjct: 285 IDPTKLETELGWKPKYTFDTGIPMTIQWYLDNKEWWE 321 >gi|225386775|ref|ZP_03756539.1| hypothetical protein CLOSTASPAR_00523 [Clostridium asparagiforme DSM 15981] gi|225047137|gb|EEG57383.1| hypothetical protein CLOSTASPAR_00523 [Clostridium asparagiforme DSM 15981] Length = 340 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 231/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS +++VN +++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKVIVTGGAGFIGSNFVQHMVNKYPDYEIINLDLLTYAGNLENLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I ++ +PD +VNFAAESHVDRSI + F+ TN++GT LL+ R + Sbjct: 61 ADREFIFKLFEDEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLD----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L + F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPELFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLIISRALADEELPVYGTGENVRDWLHVADHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ KGR GE YNIGG+NER N+++V I LD P+S LIRF+ DRPGHD RYA Sbjct: 232 VIHKGREGEVYNIGGHNERTNLEVVKTILKALDK--PES-----LIRFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P+ N +SG+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIETELGWEPKYNFDSGIQQTIQWYLDNQEWWK 321 >gi|224418599|ref|ZP_03656605.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter canadensis MIT 98-5491] gi|253826853|ref|ZP_04869738.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter canadensis MIT 98-5491] gi|313142126|ref|ZP_07804319.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter canadensis MIT 98-5491] gi|253510259|gb|EES88918.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter canadensis MIT 98-5491] gi|313131157|gb|EFR48774.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter canadensis MIT 98-5491] Length = 342 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 166/328 (50%), Positives = 219/328 (66%), Gaps = 5/328 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y + +++ +D LTYAG L +LKEI + ++F+Q DICD Sbjct: 5 ILITGGAGFIGSNFIIYFLGKYPYYKIINLDLLTYAGKLENLKEIGCNENYTFIQGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL-WWSCLSQ 120 E + E++ +++FAAESHVD SIL FI TN+ GTF LL + L W+ ++ Sbjct: 65 SELVARIFSEYEITDVIHFAAESHVDNSILNPQAFIQTNVNGTFNLLHHSYLNWFDSPNK 124 Query: 121 DK--KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K K+ F ISTDEV+GSL + G FSE PY P+SPYSA+KASSD LV ++ HTYG+ Sbjct: 125 PKTGKEDCVFHHISTDEVFGSLGESGYFSETTPYAPNSPYSASKASSDMLVRSYHHTYGL 184 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++NCSNNYGP EKLIP I + GS + +YGDG+N+RDWLYVEDH RA+ LV Sbjct: 185 NTFITNCSNNYGPKQHDEKLIPTIIRNALRGSEIPIYGDGKNIRDWLYVEDHCRAIDLVF 244 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 GE +NIGGNNE+ N++I I +LD P++ S+ E I F++DR GHDRRYAID Sbjct: 245 HSRFFGESFNIGGNNEKNNLEIATLICDILDKKKPQNRSYKEQIGFVQDRAGHDRRYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL 325 SSKI W PQE+ ESG+ KT+ WYL Sbjct: 305 SSKIYKVFNWQPQESFESGILKTIDWYL 332 >gi|330998421|ref|ZP_08322245.1| dTDP-glucose 4,6-dehydratase [Paraprevotella xylaniphila YIT 11841] gi|329568527|gb|EGG50332.1| dTDP-glucose 4,6-dehydratase [Paraprevotella xylaniphila YIT 11841] Length = 380 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 224/356 (62%), Gaps = 30/356 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 7 IIITGGAGFIGSHVVRLFVNQYPDYHIINLDKLTYAGNLANLKDIENQPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +++ D I++ AAESHVDRSI F TN++GT LL+ + +W L + Sbjct: 67 FDKMSELFRQYHVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKEYWESLPEG 126 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------------KGLFSEDMPYNPSSP 156 + + RF ISTDEVYG+L+ + F E YNP SP Sbjct: 127 YEGK-RFYHISTDEVYGALELTHPEGIEPPFTTTASSSEHHLAYGEAFFLETTKYNPHSP 185 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 186 YSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 245 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKS 274 G+NVRDWLYV DH RA+ ++ KG+ E YNIGG NE KNIDI+ + +D L+ P+ Sbjct: 246 GENVRDWLYVIDHARAIDVIFHKGKAAETYNIGGFNEWKNIDIIKVVIRTVDRLLGNPEG 305 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YS +LI ++ DR GHD RYAIDS+K+K+E+GW P E G+ KTV WYLDN W Sbjct: 306 YS-LDLITYVTDRKGHDLRYAIDSTKLKNELGWEPSLQFEEGIEKTVRWYLDNQEW 360 >gi|228951699|ref|ZP_04113801.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807984|gb|EEM54501.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 323 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLLDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIINLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|237709711|ref|ZP_04540192.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|229456347|gb|EEO62068.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] Length = 379 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 227/355 (63%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHDDIRVVVLDALTYAGNLGTIASDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 DLADQLFAEYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKDVRYHQVSTDEVYGSLGAEGFFTETTPLCPHSPYSASKTSADMIVMAYRDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG+NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGKNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 L+KGR GE YN+GG+NE++NI IV + ++ ++ + + Sbjct: 245 LRKGREGEVYNVGGHNEKENIQIVKLTIATIHRMMTETPEYRKILKKKELNDKGEISIDW 304 Query: 280 ----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID +KI +E+GW+P+ E+G+ KT+ WYL+N W Sbjct: 305 INESLITFVKDRLGHDQRYAIDPTKITNELGWYPETKFETGIVKTIQWYLENQAW 359 >gi|237725138|ref|ZP_04555619.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D4] gi|229436404|gb|EEO46481.1| dTDP-glucose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] Length = 370 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 228/355 (64%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHDDIRVVVLDALTYAGNLGTIASDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 DLADQLFAEYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKDVRYHQVSTDEVYGSLGAEGFFTETTPLCPHSPYSASKTSADMIVMAYRDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG+NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGKNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 L+KGR GE YN+GG+NE++NI+IV + ++ ++ + + Sbjct: 245 LRKGREGEVYNVGGHNEKENIEIVKLTIATIHRMMTETPEYRKILKKKELNDKGEISIDW 304 Query: 280 ----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID +KI +E+GW+P+ E+G+ KT+ WYL+N W Sbjct: 305 INESLITFVKDRLGHDQRYAIDPTKITNELGWYPETKFETGIVKTIQWYLENQAW 359 >gi|149279786|ref|ZP_01885913.1| dTDP-D-glucose 4,6-dehydratase [Pedobacter sp. BAL39] gi|149229376|gb|EDM34768.1| dTDP-D-glucose 4,6-dehydratase [Pedobacter sp. BAL39] Length = 351 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 223/332 (67%), Gaps = 7/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R V + +DKLTYAGNL +L ++ + + F++ DI Sbjct: 4 KILITGGAGFIGSHVVRRFVKKYPDYSIFNLDKLTYAGNLLNLTDVEDAANYKFVKGDIV 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E I + DA+++ AAESHVDRSI +F+ TN+IGT LL R +W + Sbjct: 64 EAEFINDLFRTHDFDAVIHLAAESHVDRSIASPMDFVMTNVIGTVNLLNAAREYWKG-AY 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 DKK RF +STDEVYG+L + G+F+E Y+P SPYSA+KASSD+ V A+ TYG+ V Sbjct: 123 DKK---RFYHVSTDEVYGALGETGMFTESTSYDPHSPYSASKASSDHFVRAYHDTYGLDV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG +HFPEKLIPLAI + V +YG G+NVRDWL+VEDH RA+ ++ + Sbjct: 180 VISNCSNNYGSHHFPEKLIPLAINNIKNNKPVPVYGKGENVRDWLWVEDHARAIDVIFHE 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 + GE YNIGG+NE KNID++ + ++D + + +E LI ++ DR GHD RYAIDS Sbjct: 240 AKTGETYNIGGHNEWKNIDLIKLLCGIMDEKLGREAGTSEKLITYVTDRAGHDLRYAIDS 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK++ ++GW P E GL KTV WYL+N W Sbjct: 300 SKLQQKLGWVPSLQFEEGLKKTVDWYLENEKW 331 >gi|148360588|ref|YP_001251795.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila str. Corby] gi|148282361|gb|ABQ56449.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila str. Corby] Length = 355 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q DI Sbjct: 21 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGDIL 79 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 80 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 139 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 140 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 199 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 200 VTTSNCSNNYGPNQHKEKLIPKVVFACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 259 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + LI F+EDR GHD+RYAID+ Sbjct: 260 KGALGEVYNIGGNNELDNLSLIKMICQMMDDLKPMEKPYHSLITFVEDRKGHDKRYAIDN 319 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV YL Sbjct: 320 SKIQKELGWVPQGDFVHKLSNTVHHYL 346 >gi|29345876|ref|NP_809379.1| dTDP-glucose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] gi|253567877|ref|ZP_04845288.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_6] gi|29337769|gb|AAO75573.1| dTDP-glucose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] gi|251841950|gb|EES70030.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_6] Length = 370 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 169/346 (48%), Positives = 223/346 (64%), Gaps = 20/346 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN +++ +DKLTYAGNL +LK+I + F++ DICD Sbjct: 7 IMITGGAGFIGSHVVRLFVNKYPSYRIINLDKLTYAGNLANLKDIEDKPNYVFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + E++ D +++ AAESHVDRSI F TN++GT LL+ +L W LS+ Sbjct: 67 FEKMIELFSEYKIDGVIHLAAESHVDRSINDPFTFARTNVMGTLSLLQAAKLTWESLSEG 126 Query: 122 KKDQFRFLQISTDEVYGSLD---------------KGLFSEDMPYNPSSPYSATKASSDY 166 + + RF ISTDEVYG+LD F E Y+P SPYSA+KASSD+ Sbjct: 127 YEGK-RFYHISTDEVYGALDLTNPSGNKDGRGPYGHDFFKETTRYSPHSPYSASKASSDH 185 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 V A+ TY +P +++NCSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYV Sbjct: 186 FVRAFHDTYNMPTIVTNCSNNYGPYQFPEKLIPLFINNIRCRKPLPVYGKGENVRDWLYV 245 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFI 284 DHVR + L+ KG+I E YNIGG NE KNIDI+ + +D L+ P+ YS +LI ++ Sbjct: 246 IDHVRGIDLIFHKGKIAETYNIGGFNEWKNIDIIKVLIKTVDRLLGYPEGYS-LDLITYV 304 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DR GHD RYAIDS+K+K E+GW P E GL +TV WYLDN W Sbjct: 305 SDRKGHDLRYAIDSAKLKQELGWEPSLQFEEGLERTVRWYLDNEVW 350 >gi|227894120|ref|ZP_04011925.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ultunensis DSM 16047] gi|227864065|gb|EEJ71486.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ultunensis DSM 16047] Length = 356 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 226/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK + F F+++DI Sbjct: 12 MKVIVTGGAGFIGSNFIFYMMKKHPDYEIICLDKLTYAGNLSTLKSVLDKPNFKFVKLDI 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ + +E +PD +VNFAAESHVDRSI F+ TNIIGT +L++ R Sbjct: 72 CDRDGVYKLFEEEKPDVVVNFAAESHVDRSIENPTIFLETNIIGTSVLMDACR------- 124 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 125 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 182 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 183 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGENVRDWLYVEDHCKAIDL 242 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG+ GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 243 ILEKGKAGEIYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI E+GW P+ + G+ KT+ WYLDN WW Sbjct: 296 IDPDKIHKELGWLPETMFKDGIKKTIQWYLDNKEWWE 332 >gi|154490149|ref|ZP_02030410.1| hypothetical protein PARMER_00379 [Parabacteroides merdae ATCC 43184] gi|154089041|gb|EDN88085.1| hypothetical protein PARMER_00379 [Parabacteroides merdae ATCC 43184] Length = 379 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 167/357 (46%), Positives = 225/357 (63%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ +I+++V+D LTYAGNL ++ E F++ +ICDR Sbjct: 5 LITGAAGFIGANFIKYMLAKYPEIKIVVLDLLTYAGNLGTIAEDIDGERCEFVKGNICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++Q D +VNFAAESHVDRSI F+ TNI+GT LL+ R W Sbjct: 65 ALTDELFAKYQFDYVVNFAAESHVDRSIENPQLFLVTNILGTQNLLDSARKAWVTGKAAT 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPEWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVQAYSETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ LV Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGTNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + KGR GE YN+GG+NE++NI+IV EIG D I Sbjct: 245 IHKGRAGEVYNVGGHNEKQNIEIVKLTISTIRRLMTEQPEYRRILKKKEIG--ADGQISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ + E+G+ KT+ WYLDN W Sbjct: 303 DWINDSLITFVKDRLGHDQRYAIDPTKITNELGWTPETSFETGIVKTIRWYLDNQKW 359 >gi|149195143|ref|ZP_01872234.1| dTDP-D-glucose 4,6-dehydratase [Caminibacter mediatlanticus TB-2] gi|149134695|gb|EDM23180.1| dTDP-D-glucose 4,6-dehydratase [Caminibacter mediatlanticus TB-2] Length = 354 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 223/342 (65%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y + + ++ +DKLTYAGNL +LKE+ + + F++ DIC+ Sbjct: 5 ILITGGAGFIGSNFIPYFLEKYPEYNIINLDKLTYAGNLENLKELENNPRYKFIKGDICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + EF +++FAAESHVD SI D F+ TN+ GTF L++ +W Sbjct: 65 RELVEYIFNEFDIQGVIHFAAESHVDNSIKNPDVFVKTNVNGTFTLMDVAYKYWMEGPFK 124 Query: 122 KKDQF---RFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K+++ RF ISTDEVYG+L LF+E+ PY P+SPYSA+KASSD +V ++ HTY Sbjct: 125 YKEKYKNSRFHHISTDEVYGTLSDDPNELFTEETPYRPNSPYSASKASSDMIVRSYHHTY 184 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I I + + +YGDG+N+RDWLYV DH + + L Sbjct: 185 GMNTIITNCSNNYGPKQHDEKLIPTIIRNAINLNPIPIYGDGKNIRDWLYVLDHCKGIDL 244 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------------KSYSHTELIRF 283 KG+ GE YNIGG NER NI I +I +LD L P + S+ +LI F Sbjct: 245 AYHKGKSGETYNIGGRNERTNIYIANKICEILDELYPIKQNSKFSTLNSQLKSYKDLITF 304 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ++DRPGHDRRYAID+SKI++E+GW EN ESG+ KT+ WYL Sbjct: 305 VDDRPGHDRRYAIDASKIENELGWRADENFESGIVKTIEWYL 346 >gi|52840995|ref|YP_094794.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296785|ref|YP_123154.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Paris] gi|52628106|gb|AAU26847.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750570|emb|CAH11972.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Paris] Length = 359 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q DI Sbjct: 25 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGDIL 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 84 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 143 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 144 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 203 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 204 VTTSNCSNNYGPNQHKEKLIPKVVYACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 263 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + LI F+EDR GHD+RYAID+ Sbjct: 264 KGALGEVYNIGGNNELDNLSLIKMICQMMDDLKPMEKPYHSLITFVEDRKGHDKRYAIDN 323 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV YL Sbjct: 324 SKIQKELGWVPQGDFVHKLSNTVHHYL 350 >gi|116625283|ref|YP_827439.1| dTDP-glucose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116228445|gb|ABJ87154.1| dTDP-glucose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 339 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 162/331 (48%), Positives = 217/331 (65%), Gaps = 17/331 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA R + + + V+ +DKLTYAGNL +L + S+ + F+ DIC Sbjct: 1 MKILVTGGAGFIGSAFVRMAIAETDLHVVNLDKLTYAGNLENLAPVDGSDRYRFVHGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L E +PDAIV+FAAESHVDRSIL + + TN GTF LLE R Sbjct: 61 DAALVEATLAEERPDAIVHFAAESHVDRSILSPEPVVRTNYNGTFTLLEAAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF+ +STDEVYGSL+ +++ NPSSPYSA+KA+SD L ++ TY +PV Sbjct: 113 -RQKIARFVHVSTDEVYGSLEAPAEADEAYVLNPSSPYSASKAASDLLARSYFVTYKLPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++ SNNYGPY FPEKLIPL I ++ + +YGDGQ VRDWLYV DH R + VL + Sbjct: 172 LITRASNNYGPYQFPEKLIPLMIANALDDQPLPVYGDGQQVRDWLYVYDHCRGIMAVLNQ 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGGN N+D++ ++ A+ KS S LI +++DRPGHDRRYA+ S Sbjct: 232 GREGEIYNIGGNRSLPNLDVIHQV----LAITGKSES---LIVYVKDRPGHDRRYALSSE 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ E GW P + E+GL +T+ WY N W Sbjct: 285 KLMHETGWQPLMDFETGLARTIEWYRGNAAW 315 >gi|307609554|emb|CBW99054.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila 130b] Length = 355 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q DI Sbjct: 21 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGDIL 79 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 80 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 139 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 140 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 199 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 200 VTTSNCSNNYGPNQHKEKLIPKVVFACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 259 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + LI F+EDR GHD+RYAID+ Sbjct: 260 KGALGEVYNIGGNNELDNLSLIKMICQMMDDLKPMEKPYHSLITFVEDRKGHDKRYAIDN 319 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV YL Sbjct: 320 SKIQKELGWVPQGDFVHKLSNTVHHYL 346 >gi|229028990|ref|ZP_04185089.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1271] gi|228732270|gb|EEL83153.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH1271] Length = 322 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 164/336 (48%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEYVVKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KA +D + L++ TY +P Sbjct: 114 --KYPHIKLVQVSTDEVYGSLGKIGRFTEETPLAPNSPYSSSKAGADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL IT +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMITNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE YNIGGNNE+ NID+V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 EGRIGEVYNIGGNNEKTNIDVVEQIISLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVQWYEKNKEWWKPL 320 >gi|307331597|ref|ZP_07610707.1| dTDP-glucose 4,6-dehydratase [Streptomyces violaceusniger Tu 4113] gi|306882770|gb|EFN13846.1| dTDP-glucose 4,6-dehydratase [Streptomyces violaceusniger Tu 4113] Length = 324 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 221/341 (64%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R + QV+V+DKLTYAGN +L E++ S F+ Sbjct: 1 MRIVVTGGAGFIGSHFVRQTLTGAYAAWADAQVVVVDKLTYAGNEANLAEVADSPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD E + L+ D +V+FAAESHVDRSI GA+EF+ TN++GT LL Sbjct: 61 RGDICDGELVGELLR--GTDLVVHFAAESHVDRSISGAEEFVRTNVLGTHTLLN------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + +F+ +STDEVYGS++ G +SE P P+SPYSA+KASSD L A+ T+ Sbjct: 113 ---AAANAEVGKFVHVSTDEVYGSIESGSWSEQEPLEPNSPYSASKASSDLLARAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY PEK+IPL +T +++G V LYGDG NVRDWL+V+DH R + L Sbjct: 170 GLPVCVTRCSNNYGPYQHPEKVIPLFVTNLMDGKPVPLYGDGGNVRDWLHVDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V + GR GE YNIGG E N+D+ + LL A ++ + DR GHDRRY+ Sbjct: 230 VAENGRPGEVYNIGGGTELTNLDLTERLLELLGA-------DRSMVERVPDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D +KI +E+G+ P+ + E+GL +T WY+ + WW PL K Sbjct: 283 VDIAKISAELGYRPEISFENGLAETAKWYMTHRGWWEPLKK 323 >gi|153854430|ref|ZP_01995708.1| hypothetical protein DORLON_01703 [Dorea longicatena DSM 13814] gi|149752956|gb|EDM62887.1| hypothetical protein DORLON_01703 [Dorea longicatena DSM 13814] Length = 342 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 164/340 (48%), Positives = 224/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++N +++ +D LTYAGNL++L+ + + F F++ I Sbjct: 1 MTIIVTGGAGFIGSNFVFHMLNKYPDYRIVCLDCLTYAGNLSTLEPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +PD +VNFAAESHVDRSI + F+ TNI GT +L++ R Sbjct: 61 TDREAVYKLFEEEKPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E+ P + SSPYS++KA++D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGEGLNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ GR+GE YN+GG+NE+ NI+IV +I K E LI + DR GHD RY Sbjct: 232 IIHNGRVGEVYNVGGHNEKTNIEIV--------KIICKELGKPESLITHVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ E G+ KT+ WYL+N WW + Sbjct: 284 AIDPTKIHNELGWLPETKFEDGIKKTIKWYLENKEWWETI 323 >gi|189502421|ref|YP_001958138.1| hypothetical protein Aasi_1064 [Candidatus Amoebophilus asiaticus 5a2] gi|189497862|gb|ACE06409.1| hypothetical protein Aasi_1064 [Candidatus Amoebophilus asiaticus 5a2] Length = 337 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 218/332 (65%), Gaps = 7/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ Y +N + +++ +DKLTYAGNLN+L E+ + + F+Q DI + Sbjct: 4 ILVTGGAGFIGANFIPYFLNKYPEYEIVNLDKLTYAGNLNNLTEVHSNPRYHFVQGDITN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + S ++F I++ AAESHVDRSI FI TNI GTF+LLE RL W + Sbjct: 64 RELVSSLFRQFDFQGIIHLAAESHVDRSIQDPTLFIKTNIEGTFVLLEAARLHWMQKPGE 123 Query: 122 KKDQF---RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + RFL +STDEVYGSL G F+E+ PY P++PYSATKA SD LV ++ HTYG Sbjct: 124 YKQDYIESRFLHVSTDEVYGSLGPAGFFTEETPYAPNNPYSATKAGSDLLVRSYVHTYGF 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + ++ SNNYGP +PEKLIP+ I R + + ++G G VRDW+YV DH + + L Sbjct: 184 NAITTHASNNYGPKQYPEKLIPIIIQRALAQQPIPIHGKGNAVRDWIYVLDHCKGIDLTF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 G+IGE YN GGN+E+ N+ I +++ LLD L P S S+ LI F+ DRPG+D+RYA Sbjct: 244 HYGQIGEHYNFGGNHEQNNLQIAYQVCALLDKLAPLSNRSSYQSLITFVTDRPGNDQRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + + K + +GW +E E+GL KTV WYL N Sbjct: 304 LATQKAEKTLGWKAEEPFETGLQKTVQWYLKN 335 >gi|329925176|ref|ZP_08280119.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] gi|328940009|gb|EGG36342.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] Length = 328 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 229/335 (68%), Gaps = 25/335 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 M+++VTGGAGFIGS RY++ ND + +++DKLTYAGN +L E+ ++ + F++ Sbjct: 1 MKIVVTGGAGFIGSNFIRYMLSQHPND---EFIIVDKLTYAGNSGNLSEVRTNSKYRFVK 57 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR + KE DA+VNFAAESHVDRSIL + F+ TN+ GT LL+ +R + Sbjct: 58 ADIRDRAALEPLFKE-GVDAVVNFAAESHVDRSILQPELFVLTNVAGTQTLLDLSRQYGV 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +F+Q+STDEVYG+L GLF+E+ P P+SPYSA+KA +D +V A+ T+ Sbjct: 117 G---------KFVQVSTDEVYGTLGATGLFTEESPLQPNSPYSASKAGADLMVRAYYETF 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ ++ CSNNYGPY +PEKLIPL I + + +YGDG NVRDWLYVEDH RA+ L Sbjct: 168 GLPINITRCSNNYGPYQYPEKLIPLIIYNALHNKPLPVYGDGLNVRDWLYVEDHCRAVDL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL++G GE YNIGG+NER N+ ++ I L+ P++ LI+ I+DRPGHDRRYA Sbjct: 228 VLRQGVDGEIYNIGGHNERNNLQVIRTILSELNK--PET-----LIQHIKDRPGHDRRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I++ KI+ E+GW PQ + ESG+ +T+ WY N W Sbjct: 281 INADKIRKELGWAPQYHYESGIRETIRWYQKNLAW 315 >gi|296106346|ref|YP_003618046.1| dTDP-glucose 4,6-dehydratase [Legionella pneumophila 2300/99 Alcoy] gi|295648247|gb|ADG24094.1| dTDP-glucose 4,6-dehydratase [Legionella pneumophila 2300/99 Alcoy] Length = 342 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q DI Sbjct: 8 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGDIL 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 67 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 126 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 127 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 186 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 187 VTTSNCSNNYGPNQHKEKLIPKVVFACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 246 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + LI F+EDR GHD+RYAID+ Sbjct: 247 KGALGEVYNIGGNNELDNLSLIKMICQMMDDLKPMEKPYHSLITFVEDRKGHDKRYAIDN 306 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV YL Sbjct: 307 SKIQKELGWVPQGDFVHKLSNTVHHYL 333 >gi|325836660|ref|ZP_08166203.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] gi|325491185|gb|EGC93473.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] Length = 342 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 226/336 (67%), Gaps = 21/336 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIG Y+VN ++V +D LTYAGNL + + + + F++ DI Sbjct: 5 KMLVTGGAGFIGGNFVHYMVNKYPNYMIVNLDALTYAGNLETCQPVEGKPNYKFVKGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE I ++ + D +VNFAAESHVDRS+ + FI TN++GT +L++ +R + Sbjct: 65 DREFIFDLFEKEKFDVVVNFAAESHVDRSVKDPEIFIKTNVLGTQVLMDASRAYGVE--- 121 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ Q+STDEVYG L D+ F+E+ P + SSPYSA+KAS+D LV A+ T+G Sbjct: 122 ------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSASKASADLLVFAYHRTFG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ +S CSNNYGPYHFPEKLIPL I+R + + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 176 LPITISRCSNNYGPYHFPEKLIPLMISRALNDEKLPVYGNGENVRDWLHVYDHCAAIDLI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L KGR+GE YN+GG+NER N+++V I L AL +LI ++ DRPGHD RYAI Sbjct: 236 LHKGRVGEVYNVGGHNERTNLEVVRTI---LKALGKSE----DLITYVTDRPGHDLRYAI 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D K+++E+GW P N ++G+ +T+ WYLDN WW Sbjct: 289 DPQKLENELGWKPTYNFDTGIAQTIQWYLDNKQWWE 324 >gi|54293742|ref|YP_126157.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Lens] gi|53753574|emb|CAH15029.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Lens] Length = 359 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 160/327 (48%), Positives = 222/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q +I Sbjct: 25 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGNIL 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 84 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 143 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 144 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 203 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 204 VTTSNCSNNYGPNQHKEKLIPKVVYACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 263 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + LI F+EDR GHD+RYAID+ Sbjct: 264 KGVLGEVYNIGGNNELDNLSLIKMICQMMDDLKPMEKPYHSLITFVEDRKGHDKRYAIDN 323 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV +YL Sbjct: 324 SKIQKELGWVPQGDFVHKLSNTVQYYL 350 >gi|228957592|ref|ZP_04119343.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802091|gb|EEM48957.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 322 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLKSYESYKIINYDALTYSGNLNNVKSLQDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDR YAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRHYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|268316908|ref|YP_003290627.1| dTDP-glucose 4,6-dehydratase [Rhodothermus marinus DSM 4252] gi|262334442|gb|ACY48239.1| dTDP-glucose 4,6-dehydratase [Rhodothermus marinus DSM 4252] Length = 363 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 156/331 (47%), Positives = 220/331 (66%), Gaps = 5/331 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+V ++Q + +D LTYAGNL +L++I + + F++ D+ D Sbjct: 15 VLVTGGAGFIGSNFLLYMVPRYPEVQFINLDSLTYAGNLLNLRDIEDAPNYRFVRGDVAD 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +E +V+FAAESHVDRSI+ F+ TN +GT LLE R W Sbjct: 75 APLVERLFREHGITTVVHFAAESHVDRSIMTPLSFVLTNTVGTVTLLEAARKAWG--DHA 132 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++FRF ISTDEV+GSL +G F+E PYNP SPY+A+KA+SD+ V A+ HTYG+PV+ Sbjct: 133 DPERFRFYHISTDEVFGSLGPEGYFTESTPYNPRSPYAASKAASDHFVRAYWHTYGLPVV 192 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPY FPEKLIPL I +E + +YG G+NVRDWLYV DH A+ +L G Sbjct: 193 ISNCSNNYGPYQFPEKLIPLVILNALENRPIPIYGKGENVRDWLYVRDHCTAIERILLSG 252 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSS 299 + G+ Y + ERKN+++V ++ L+D + + + LI F++DRPGHD RYA+D+S Sbjct: 253 QTGQTYLVSAGCERKNLELVQQLLDLIDEELGRPVGQSRRLITFVKDRPGHDFRYALDAS 312 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +++ E+GW P +E GL +TV WYL + W Sbjct: 313 RLREELGWAPAYTLEEGLRETVRWYLTHRDW 343 >gi|229108780|ref|ZP_04238387.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock1-15] gi|228674671|gb|EEL29908.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock1-15] Length = 323 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|241761598|ref|ZP_04759685.1| dTDP-glucose 4,6-dehydratase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373906|gb|EER63439.1| dTDP-glucose 4,6-dehydratase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 350 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/337 (45%), Positives = 222/337 (65%), Gaps = 4/337 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG GFIGSA+ RYL+ + V+ +D +TYA + ++ ++S + + ++I Sbjct: 1 MVILLTGGCGFIGSAVIRYLIKYTEHSVINVDCMTYAASKEAVTQVSTCDRYRHENININ 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +++ PDA+++ AAESHVDRSI ++FI TNI+GT+ LLE +R +W L++ Sbjct: 61 NTLELDKIFEKYHPDAVMHLAAESHVDRSIEKPEKFIETNILGTYNLLECSRKYWEKLNK 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK F+F ISTDEV+G LD F+ PYNP SPYSA+KASSD+LV AW TYG+P Sbjct: 121 SKK-IFKFHHISTDEVFGHLDINDKPFTRQSPYNPRSPYSASKASSDHLVRAWRDTYGLP 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N +NNYGP+HFPEKLIPL I G + +YGDG N+RDWL+VEDH AL ++ Sbjct: 180 TFITNTANNYGPWHFPEKLIPLITLNAIHGKELPVYGDGTNIRDWLFVEDHAEALVKAIE 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 G G+ Y IG R N+ +V I +LD + P + +LIR++ DRPGHD RY ID Sbjct: 240 YGEPGDTYTIGARQPRTNLQVVEAICDILDEIQPTPEGARRQLIRYVADRPGHDFRYEID 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + + ++GW + N E+G+ KT+ WYLDN WW+ + Sbjct: 300 PTYAEQKLGWKAKHNFEAGIRKTIQWYLDNRMWWQKI 336 >gi|218290279|ref|ZP_03494425.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218239634|gb|EED06826.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 165/334 (49%), Positives = 224/334 (67%), Gaps = 20/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS RY+ V+V +D LTYAGNL++LK+I + ++F++ DI Sbjct: 1 MKLLITGGAGFIGSNFVRYMRQMHPEDVIVNVDALTYAGNLSNLKDIDEREHYTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + D IVNFAAESHVDRSI+ F+ TN++GT +LL+ R Sbjct: 61 TDASAMDTIVAG-GFDVIVNFAAESHVDRSIMDPGAFVRTNVMGTQVLLDAAR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +F+Q+STDEVYG+L D F+E P +P+SPYSA+KA +D LV A+ TYG+ Sbjct: 113 --RHGVKKFVQVSTDEVYGTLGPDDAPFTETTPLHPNSPYSASKAGADLLVRAYHETYGM 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGPY FPEKLIPL IT +E + +YGDG +RDWL+V DH + LV+ Sbjct: 171 HVNITRCSNNYGPYQFPEKLIPLMITNALEDKPLPVYGDGLQIRDWLHVWDHCAGIDLVI 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GR GE YNIGGNNER N+DIV I L P++ LIR +EDRPGHDRRYAID Sbjct: 231 RHGRSGEVYNIGGNNERTNLDIVRTILRYLGK--PET-----LIRHVEDRPGHDRRYAID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++KI++E+GW P+ E G+ +T+ WYL + WW Sbjct: 284 ATKIRTELGWQPKYAFEDGIRETIEWYLTHRDWW 317 >gi|22255845|gb|AAM94770.1| CalS3 [Micromonospora echinospora] Length = 343 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 158/339 (46%), Positives = 223/339 (65%), Gaps = 19/339 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGFIGS R L+ +++ V+DKLTYAGNL +L+ ++ + F++ D Sbjct: 5 RILVTGGAGFIGSHYVRTLLRPAGPGGVRITVLDKLTYAGNLANLRPVAGHPAYRFVRGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + + E D +V+FAAESHVDRSI +F+ TN +GT+ LLE R Sbjct: 65 ICDSLLVDRLVAEH--DQVVHFAAESHVDRSIADGGDFVRTNTLGTYTLLEAVR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D+ F+ +STDEVYGS++ G + E P PSSPY+A KA+SD L LA+ T+G+ Sbjct: 117 -RRHGDRAVFVHVSTDEVYGSIEHGTWPETDPVLPSSPYAAAKAASDLLALAFVRTHGLD 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C+NNYGP+ PEKL+PLAIT +++G V LYGDG +VRDWL+V+DHVRAL LV Sbjct: 176 VRVTRCANNYGPHQHPEKLVPLAITNLLDGGDVPLYGDGLHVRDWLHVDDHVRALELVRT 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR G+ YN+GG + N ++ D L+ + E IR++EDR GHDRRYA+D Sbjct: 236 RGRAGQVYNVGGGTQLTNREMA-------DRLLAACGAGPERIRYVEDRKGHDRRYAVDW 288 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 SKI+ E+G+ P+++++ GL TV WY N WW PL + Sbjct: 289 SKIRCELGYAPRKDLDRGLADTVAWYRANRSWWEPLRRR 327 >gi|327184177|gb|AEA32624.1| dtdp-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1118] Length = 345 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 226/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ ++ +DKLTYAGNL++LK + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFIFYMMKKHPDYDIICLDKLTYAGNLSTLKSVLDKPNFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR+ + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDRDGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 232 ILEKGTPGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPEKIHNELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|76666635|emb|CAJ31156.1| DTDP-D-glucose-4,6-dehydratase [uncultured sulfate-reducing bacterium] Length = 358 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 230/332 (69%), Gaps = 9/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 ++VTGGAGFIG R++++ D ++++ +D LTYAG+L SLK++++ + + F +DI Sbjct: 11 MLVTGGAGFIGCNFIRHVLDTDHDLRMVNLDALTYAGSLESLKDVAEKHDGRYVFEHLDI 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R + D IV+FAAESHVDRSI G +F+ TN+ GT LLE R W Sbjct: 71 RDSAAMRDIVTRHAVDTIVHFAAESHVDRSIDGPLDFVDTNVRGTANLLEAARSVWG--- 127 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D++D RF ISTDEVYGSL D+GLF+ED PY+PSSPYS++KA+SD+LV AW TYG+P Sbjct: 128 -DRQD-VRFHHISTDEVYGSLGDEGLFTEDTPYDPSSPYSSSKAASDHLVRAWHRTYGLP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V +SNCSNNYGPY FPEKLIPL I + + +YGDG+NVRDWL+V DH A+ V++ Sbjct: 186 VTISNCSNNYGPYQFPEKLIPLMIGNALNHKKLPVYGDGRNVRDWLFVTDHCSAIDAVIR 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G G YN+GG+NE NID+V + ++D L P S +LI F+ DRPGHD+RYAID+ Sbjct: 246 RGDPGRTYNVGGHNEMANIDVVHLVCDIIDELRPADGSRRDLITFVTDRPGHDQRYAIDA 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +I++E+GW P GL T+ WYL+N W Sbjct: 306 GRIEAELGWTPDHTFAQGLKDTIIWYLENGAW 337 >gi|29347426|ref|NP_810929.1| dTDP-glucose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] gi|253570636|ref|ZP_04848044.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_6] gi|298385118|ref|ZP_06994677.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_14] gi|29339326|gb|AAO77123.1| dTDP-glucose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] gi|251839585|gb|EES67668.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_6] gi|298262262|gb|EFI05127.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 1_1_14] Length = 378 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 169/357 (47%), Positives = 233/357 (65%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ K+I F F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHSDIKVVVLDALTYAGNLGTIAKDIDNERCF-FIKGDICS 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + S E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + +D Sbjct: 64 REVVDSLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGKD 122 Query: 122 K------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D +V+A+ T Sbjct: 123 EQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADMVVMAYHDT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 183 YKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAID 242 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPK 273 LV+++G+ GE YN+GG+NE N++IV I L+ D I Sbjct: 243 LVVREGKEGEVYNVGGHNEETNLEIVKLTIATIRKLMTEKPEYRQVLKKKVKGEDGEISV 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 303 DWINNDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEDGIVKTIVWYLENQDW 359 >gi|261880801|ref|ZP_06007228.1| dTDP-glucose 4,6-dehydratase [Prevotella bergensis DSM 17361] gi|270332580|gb|EFA43366.1| dTDP-glucose 4,6-dehydratase [Prevotella bergensis DSM 17361] Length = 379 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 167/354 (47%), Positives = 226/354 (63%), Gaps = 27/354 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN +++ +DKLTYAGNL +LK++ + F++ DICD Sbjct: 7 IMITGGAGFIGSHVVRLFVNKYSDYRIINVDKLTYAGNLATLKDVESEPNYVFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + ++Q D I++ AAESHVDRSI F TN++GT LL+ RL+W L + Sbjct: 67 FDKMCKLISDYQVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAARLYWESLPE- 125 Query: 122 KKDQFRFLQISTDEVYGSLD----KGL--------------------FSEDMPYNPSSPY 157 K + RF ISTDEVYGSL+ +G+ F+ED Y P SPY Sbjct: 126 KYEGKRFYHISTDEVYGSLELSNPEGMKSPFTTKASSDHHHAYGTEFFTEDKRYMPHSPY 185 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDG 217 SA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG G Sbjct: 186 SASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGKG 245 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-S 276 +NVRDWLYVEDH RA+ L+ KG I + YNIGG NE KNIDI+ + +D L+ + + Sbjct: 246 ENVRDWLYVEDHARAIDLIFHKGNIADTYNIGGFNEWKNIDIIKVLIKTVDRLLGRPEGA 305 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS K++ E+GW P E G+ +TV WYLDN W Sbjct: 306 DDDLITYVTDRLGHDARYAIDSRKLQRELGWEPSLQFEEGVERTVKWYLDNQDW 359 >gi|228920041|ref|ZP_04083390.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839497|gb|EEM84789.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 322 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHIIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFIETTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ + GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFQQGLQETVKWYEKNKEWWKPL 320 >gi|229149525|ref|ZP_04277757.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus m1550] gi|228633871|gb|EEK90468.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus m1550] Length = 323 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNLEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|149177840|ref|ZP_01856439.1| dTDP-glucose 4,6-dehydratase [Planctomyces maris DSM 8797] gi|148843330|gb|EDL57694.1| dTDP-glucose 4,6-dehydratase [Planctomyces maris DSM 8797] Length = 340 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 164/331 (49%), Positives = 224/331 (67%), Gaps = 18/331 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGG GFIGS RY +++ I V +DKLTYAGNL +LKE + ++F++ DI Sbjct: 3 QILVTGGCGFIGSNFIRYQLSEYPDISVTNLDKLTYAGNLENLKEFENHSGYTFVKGDIT 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S L DA++NFAAESHVDRSIL + FI TNI+GT ILL+ R Sbjct: 63 DADFVNSLLNSTDFDAVINFAAESHVDRSILDSGPFIHTNIVGTQILLDAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ R++Q+STDEVYGSL +GLF+E P P+SPYSA+KAS+D LV ++ T+ P Sbjct: 115 -NKNIARYVQVSTDEVYGSLGAEGLFTESTPIAPNSPYSASKASADLLVRSYIKTFDFPA 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYGPY FPEKLIPL I+ +E + +YG+G NVRDW++V DH R + L+K Sbjct: 174 IITRCSNNYGPYQFPEKLIPLFISNALEDKSLPIYGEGTNVRDWIHVIDHCRGIDAALRK 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ G+ YN GGN E +NI+I + +LD P+S LI+++ DRPGHD RYAID S Sbjct: 234 GKTGQIYNFGGNAEMQNIEITRLLLNILDK--PES-----LIKYVTDRPGHDLRYAIDCS 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K ++E+GW P+ ++GL TV WYLDN W Sbjct: 287 KAEAELGWKPETRFDTGLKDTVQWYLDNPEW 317 >gi|325106544|ref|YP_004276198.1| dTDP-glucose 4,6-dehydratase [Pedobacter saltans DSM 12145] gi|324975392|gb|ADY54376.1| dTDP-glucose 4,6-dehydratase [Pedobacter saltans DSM 12145] Length = 351 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 159/333 (47%), Positives = 223/333 (66%), Gaps = 8/333 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R V Q++ +DKLTYAGNL +LK+I ++ + F++ DI Sbjct: 3 KILITGGAGFIGSHVVRRFVTTYPNYQIVNLDKLTYAGNLANLKDIEEAANYRFVKGDIV 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + + DA+V+ AAESHVDRSI EF+ TN++GT LL + W + Sbjct: 63 DANFINNLFEAENFDAVVHLAAESHVDRSITNPTEFVMTNVVGTVNLLNAAKNSW----K 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DQ RF +STDEVYG+L +G +F+E+ Y+P SPYSA+KASSD+ V A+ TYG+ Sbjct: 119 GNYDQKRFYHVSTDEVYGTLGEGNEMFTEETSYDPHSPYSASKASSDHFVRAYHDTYGLD 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG YHFPEKLIPL+I + + +YG G+NVRDWL+V DH RA+ ++ Sbjct: 179 VVISNCSNNYGSYHFPEKLIPLSINNIKHNKPIPIYGKGENVRDWLWVVDHARAIDVIFH 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 + G YNIGG+NE KNID++ + ++D + + +E LI ++ DR GHD RYAID Sbjct: 239 NAKSGSTYNIGGHNEWKNIDLIKVLCKIMDEKLGRKEGTSEKLITYVTDRAGHDLRYAID 298 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++K+K ++GW P E GL KTV WYL+N W Sbjct: 299 ATKLKRDLGWEPSLQFEEGLEKTVDWYLENEEW 331 >gi|261405319|ref|YP_003241560.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] gi|261281782|gb|ACX63753.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] Length = 328 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 164/332 (49%), Positives = 226/332 (68%), Gaps = 19/332 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS RY+++ + +DKLTYAGN +L E+ + + F++ DI Sbjct: 1 MKIVVTGGAGFIGSNFIRYMLSQHPNDEFINVDKLTYAGNSGNLSEVRTNPKYRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + KE DA+VNFAAESHVDRSIL + F+ TN+ GT LL+ +R + Sbjct: 61 RDRAALEPLFKE-GVDAVVNFAAESHVDRSILQPELFVLTNVAGTQTLLDLSRQYGVG-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+Q+STDEVYG+L GLF+E+ P P+SPYSA+KA +D +V A+ T+G+P Sbjct: 118 -------KFVQVSTDEVYGTLGAAGLFTEESPLQPNSPYSASKAGADLMVRAYYETFGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPY +PEKLIPL I + + +YGDG NVRDWLYVEDH RA+ LVL+ Sbjct: 171 INITRCSNNYGPYQYPEKLIPLIIYNALHNKPLPVYGDGLNVRDWLYVEDHCRAVDLVLR 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G GE YNIGG+NER N+ ++ I L + P++ LI+ I+DRPGHDRRYAI++ Sbjct: 231 QGVDGEIYNIGGHNERNNLQVIRTI--LSELNKPET-----LIQHIKDRPGHDRRYAINA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIK E+GW PQ + ESG+ +T+ WY +N W Sbjct: 284 DKIKKELGWAPQYHYESGIRETIRWYQENLAW 315 >gi|120436383|ref|YP_862069.1| dTDP-D-glucose 4,6-dehydratase [Gramella forsetii KT0803] gi|117578533|emb|CAL67002.1| dTDP-D-glucose 4,6-dehydratase [Gramella forsetii KT0803] Length = 347 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 164/333 (49%), Positives = 226/333 (67%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R LVN+ + + +D LTYAGNL +LK+I ++FL+ DI Sbjct: 1 MNILITGGAGFIGSHVVRLLVNEYPEYSIFNLDALTYAGNLENLKDIESERNYTFLKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + I K+++ +++ AAESHVDRSI F+ TN+IGT LL W Sbjct: 61 NNAQEISDLFKKYKFTKVIHLAAESHVDRSISDPLIFVKTNVIGTMNLLNAALENWK--- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D KD+ F ISTDEVYG+L D GLF+E Y+P+SPYSA+KASSD+ V A+G TYG+P Sbjct: 118 NDFKDKL-FYHISTDEVYGTLGDTGLFTETTAYDPNSPYSASKASSDHFVRAYGETYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP FPEKLIPL I +++ + +YGDG RDWLYV+DH A+ L+L Sbjct: 177 YIISNCSNNYGPNQFPEKLIPLFINNIVKKKALPVYGDGNYTRDWLYVKDHAIAIDLLLH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 +G+I E YNIGG NE KNI++V + ++D + ++ + +LI +++DRPGHD+RYAID Sbjct: 237 QGKIKETYNIGGFNEWKNIELVQLLCKIMDRKLNRTDGDSAKLITYVKDRPGHDKRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKI E+GW P E GL KT+ WYL + W Sbjct: 297 ASKINEELGWKPSVTFEEGLEKTIDWYLSHEEW 329 >gi|330368656|gb|AEC11778.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae] gi|330368666|gb|AEC11786.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae] Length = 356 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 176/358 (49%), Positives = 241/358 (67%), Gaps = 15/358 (4%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIGS RY++ +D K ++ ID LTYAGN +L +I + + + F +V+ Sbjct: 7 ILVTGGCGFIGSNFIRYILEKSDYKGNIINIDALTYAGNRENLIDIEKKYKDRYFFEKVN 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + I ++ PD IV+FAAESHVDRSI G +F+ TNI+GTFILLE R W Sbjct: 67 ICDDKKINEIFSKYNPDCIVHFAAESHVDRSIYGPKDFLETNIMGTFILLEAARKLW--- 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ K+ F ISTDEVYGSL + G F E PY+P SPYS++KASSD++V A+ HTY + Sbjct: 124 -ENNKENKLFHHISTDEVYGSLGETGYFYETTPYDPRSPYSSSKASSDHIVKAYYHTYNL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +SNCSNNYGPY FPEKLIPL I+ ++E + +YGDG+N+RDW++VEDH A+ ++ Sbjct: 183 PVTISNCSNNYGPYQFPEKLIPLMISNIVEEKDLPVYGDGKNIRDWIFVEDHNNAVIDII 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KGR+GE YNIGG NE NID+V + L A + K + +LI+F++DR GHDRRYAI Sbjct: 243 HKGRVGETYNIGGENEITNIDMVNILCEKLSAKMNKEKDYYKKLIKFVKDRAGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 + KIK E+GW + + +G++ T+ WYL+N W + +Y KW LN S Sbjct: 303 NCDKIKKELGWERKYDFNTGIDITIDWYLNNKQWIDNI-----KSGEYKKWIELNYSS 355 >gi|323486293|ref|ZP_08091619.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] gi|323400403|gb|EGA92775.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] Length = 340 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 169/337 (50%), Positives = 232/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN + Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPEYQIINLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I + +PD +VNFAAESHVDRSI + F+ TN+IGT LL+ R + Sbjct: 61 ADRKFIFELFENEKPDVVVNFAAESHVDRSITDPEAFVRTNVIGTTTLLDACREYGIQ-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YGDG NVRDWL+V DH A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLMISRALADEELPVYGDGANVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+++V I LD P+S LIR+++DRPGHD RYA Sbjct: 232 IIHKGRVGEVYNIGGHNERTNLEVVKTILKALDK--PES-----LIRYVKDRPGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P+ N ++G+ +T+ WYL+N WW+ Sbjct: 285 IDPTKIETEVGWEPKYNFDTGIKQTIEWYLENQDWWK 321 >gi|213961831|ref|ZP_03390097.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sputigena Capno] gi|213955620|gb|EEB66936.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sputigena Capno] Length = 330 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 158/329 (48%), Positives = 222/329 (67%), Gaps = 8/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + +DKLTYAGNL ++ +++ + ++F+Q DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPNYHIFNLDKLTYAGNLENVADVANAPNYTFIQADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ + E D I++ AAESHVDRSI F TN++GT LL+ R W Q Sbjct: 65 YERMKALIAEHHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKDNMQG 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L D LF+E PY+P SPYSA+KASSD+ V A+ +TY +PV Sbjct: 125 K----RFYHVSTDEVYGALEMDNTLFTEQTPYDPQSPYSASKASSDHFVRAYHNTYKLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG + +PEKLIP+ I +++ + +YG G+N+RDWL+VEDH RA+ + + Sbjct: 181 VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDTIFHQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGG NE +NID+V I +D + + +E LI F+ DR GHD RYAID+ Sbjct: 241 GKDGDTYNIGGFNEWRNIDLVKVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +K+K+E+GW P E G+ KTV WYL N Sbjct: 301 TKLKNELGWEPSLQFEEGIQKTVKWYLSN 329 >gi|218232660|ref|YP_002366002.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus B4264] gi|218160617|gb|ACK60609.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus B4264] Length = 323 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQDHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDW++V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWIHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|284040674|ref|YP_003390604.1| dTDP-glucose 4,6-dehydratase [Spirosoma linguale DSM 74] gi|283819967|gb|ADB41805.1| dTDP-glucose 4,6-dehydratase [Spirosoma linguale DSM 74] Length = 352 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 164/335 (48%), Positives = 220/335 (65%), Gaps = 8/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS + R V + Q+ +D LTYAGNL +LK+I + ++F++ DI Sbjct: 1 MKLLITGGAGFIGSHVVRLFVTKYPEYQIYNLDALTYAGNLANLKDIENAPNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E D +++ AAESHVDRSI F+ TN++GT LL + W+ S Sbjct: 61 TDAKFLEDMFAELSLDGVIHLAAESHVDRSITDPMSFVMTNVVGTVNLLNAAKNSWA--S 118 Query: 120 QDKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF +STDEVYGSL + F+E+ PY+P SPYSA+KA+SD+ V A+G+TY + Sbjct: 119 TGSFEGKRFYHVSTDEVYGSLHNPEDFFTEETPYDPQSPYSASKAASDHFVRAYGNTYKL 178 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+LSNCSNNYGP HFPEKLIPL I + + +YG G+NVRDWL+V DH RA+ V Sbjct: 179 PVVLSNCSNNYGPNHFPEKLIPLMIHNIQTNKPLPVYGKGENVRDWLFVVDHARAIDAVF 238 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYA 295 KG +GE YNIGG NE KNIDIV + ++D + P+ S +LI ++ DR GHD RYA Sbjct: 239 HKGTLGETYNIGGFNEWKNIDIVHLLCGIMDRKLGRPEGTS-AQLITYVTDRAGHDLRYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+ KI +E+GW P GL KTV W+L N W Sbjct: 298 IDAHKIMNELGWEPSLQFAEGLEKTVDWFLANQEW 332 >gi|157693977|ref|YP_001488439.1| dTDP-glucose 4,6-dehydratase [Bacillus pumilus SAFR-032] gi|157682735|gb|ABV63879.1| dTDP-glucose 4,6-dehydratase [Bacillus pumilus SAFR-032] Length = 353 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 167/355 (47%), Positives = 235/355 (66%), Gaps = 8/355 (2%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS +L++ K I+++ +DKLTYAGNL +L + F++ DI D Sbjct: 5 LVTGGAGFIGSNFIAFLLDTYKDIKIINLDKLTYAGNLENLINYDGFENYKFIKGDINDS 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + D +VNFAAESHVDRSI F+ TN++GT LL + +W Sbjct: 65 VLLNEIFENNEIDYVVNFAAESHVDRSIENPSIFVETNVLGTLNLLNTAKKFWQKAEDIY 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +F+QISTDEVYGSL ++G F+E+ P +P SPYSA+KAS+D LV ++ TY PV + Sbjct: 125 IEGKKFIQISTDEVYGSLSNEGYFTEETPLDPHSPYSASKASADLLVQSFFDTYKFPVNI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + IE + +YGDG NVRDWL+VEDH A+ LV+K G+ Sbjct: 185 TRCSNNYGPFQFPEKLIPLVIHQCIEKKQIPIYGDGLNVRDWLFVEDHCSAVDLVIKNGQ 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIGG+NE+ NI +V +I L+ + ++ + ELI F++DR GHDRRYAID +KI Sbjct: 245 LGEVYNIGGHNEKTNIGLVNKIIGYLNEEVDENIN-KELITFVKDRKGHDRRYAIDPTKI 303 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCN 356 + E+ W P+ + E+G+ KT+ WYLDN+ W + D++Y K+ N N Sbjct: 304 EKELQWKPKYHFETGIIKTIDWYLDNSEWLNNIL-----DDEYKKYYQKNYGKLN 353 >gi|239628660|ref|ZP_04671691.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47_FAA] gi|239518806|gb|EEQ58672.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47FAA] Length = 340 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 231/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS ++VN Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGSNFVHHMVNKYPDYQIINLDLLTYAGNLENLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I S + +PD +VNFAAESHVDRSI + F+ TN++GT LL+ R + Sbjct: 61 ADRKFIFSLFETEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACRTYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VL++ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLSYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLIISRALADEELPVYGTGENVRDWLHVADHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ KGR GE YNIGG+NER N+++V I LD P+S LI+F+ DRPGHD RYA Sbjct: 232 VIHKGREGEVYNIGGHNERTNLEVVRTILKALDK--PES-----LIKFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW PQ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIETELGWKPQYNFDTGIEQTIQWYLDNQEWWK 321 >gi|300770498|ref|ZP_07080377.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] gi|300762974|gb|EFK59791.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] Length = 349 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 224/331 (67%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R +++ ++ +D LTYAGNL +LK++ + + F++ DI D Sbjct: 5 IIITGGAGFIGSHVVREFVIKYPDYHIVNLDALTYAGNLENLKDVQDRSNYKFVKADITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I K +QPD +++ AAESHVDRSI F+ TN+IGT LL + W +D Sbjct: 65 ANHIIEIFKNYQPDGVIHLAAESHVDRSISDPTAFVMTNVIGTVNLLNAAKEIW----RD 120 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF +STDEV+G+L GLF+ED Y+P SPYSA+KASSD+ V A+ TYG+P++ Sbjct: 121 NYEGKRFHHVSTDEVFGALGSTGLFTEDTKYDPHSPYSASKASSDHFVRAYHDTYGLPIV 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGP HFPEKLIPL I ++ + +YGDG+ RDWL+V DH +A+ LV +G Sbjct: 181 LTNCSNNYGPNHFPEKLIPLCIHNILNNKPLPIYGDGKYTRDWLFVIDHAKAIDLVYHQG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSS 299 + GE YN+GG NE +NID+V E+ +D + K + + +LI +++DRPGHD RYAID++ Sbjct: 241 KSGESYNVGGFNEWQNIDLVKELCKQMDEKLGKPAGTADQLITYVKDRPGHDLRYAIDAT 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+G+ P E GL+ T+ W+L+N W Sbjct: 301 KINQELGYQPSVTFEEGLSVTIDWFLNNQDW 331 >gi|228906953|ref|ZP_04070820.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] gi|228852701|gb|EEM97488.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] Length = 323 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQNHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEKTPLAPNSPYSSSKASADLIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+ L Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKLL 320 >gi|228938437|ref|ZP_04101046.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971316|ref|ZP_04131943.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977926|ref|ZP_04138307.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis Bt407] gi|228781843|gb|EEM30040.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis Bt407] gi|228788352|gb|EEM36304.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821174|gb|EEM67190.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938944|gb|AEA14840.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar chinensis CT-43] Length = 323 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYESYKIINYDALTYSGNLNNVKSLQNHPNYFFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEYVIKERDVKVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTETTPLAPNSPYSSSKASADMIALSYYKTYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG N+RDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNIRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+PL Sbjct: 285 EKMKTEFDWEPKYTFEQGLQETVKWYEKNKEWWKPL 320 >gi|311896579|dbj|BAJ28987.1| putative dTDP-glucose 4,6-dehydratase [Kitasatospora setae KM-6054] Length = 325 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 219/335 (65%), Gaps = 19/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS R L D Q+ V DKLTY+G +L ++ + F+Q DI Sbjct: 1 MRILVTGGAGFIGSEFVRQQLGADPTAQITVFDKLTYSGVEENLAPVASLPGYRFVQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + + D +V+FAAESHVDRSI GA F+ TN++GT +LL+ R Sbjct: 61 CDPEAVDRVMAGH--DVVVHFAAESHVDRSIAGAGPFVLTNVVGTQVLLDAAR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ +STDEVYGS+D+G ++E+ P P+SPYSA+KA SD L LA+ T+G+ V Sbjct: 112 --QHGVGRFVHVSTDEVYGSIDEGSWTEEWPLRPNSPYSASKAGSDLLALAYHRTHGMDV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYG Y FPEK+IPL T +I+G V LYG+G N+RDWL+V DH R + LV++ Sbjct: 170 VVTRCSNNYGHYQFPEKVIPLFTTNLIDGLKVPLYGEGGNIRDWLHVSDHCRGIDLVMRG 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N ++ G LLDA + + +++ +EDR GHD RY++D S Sbjct: 230 GRAGEVYNIGGGTEVTNKELT---GLLLDA----AGAGWDMVEHVEDRKGHDLRYSLDIS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI++E+G+ PQ E GL T+ WY DN WW PL Sbjct: 283 KIRTELGYEPQVRFEDGLAATIAWYRDNRAWWEPL 317 >gi|189347267|ref|YP_001943796.1| dTDP-glucose 4,6-dehydratase [Chlorobium limicola DSM 245] gi|189341414|gb|ACD90817.1| dTDP-glucose 4,6-dehydratase [Chlorobium limicola DSM 245] Length = 349 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 218/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS + R+ + V +D LTYAGNL +L+++ + F++ DI Sbjct: 1 MHILVTGGAGFIGSHVVRHFLRAYPDYTVTNLDSLTYAGNLANLRDVEHQPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +EF+ D +++ AAESHVDRSI EF+TTN++GT LL R W+ Sbjct: 61 TDALFLERLFEEFRFDGVIHLAAESHVDRSIASPVEFVTTNVLGTVNLLNAARRCWAGSF 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYGSL +G+F+E+ Y+P SPYSA+KASSD+ V AW TYG+P Sbjct: 121 GGK----RFYHISTDEVYGSLGSEGMFTEETAYDPHSPYSASKASSDHFVRAWHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG Y FPEKLIPL I + + +YG G+NVRDWL+V DH A+ ++ Sbjct: 177 VVISNCSNNYGSYQFPEKLIPLFINNIRTKKPLPVYGKGENVRDWLWVVDHASAIDVIYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G GE YNIGG+NE KNID++ + ++D L K ELI ++ DR GHD RYAID Sbjct: 237 EGVDGETYNIGGHNEWKNIDLILLLCRIMDEKLGRKPGESAELITYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SSK++ E+GW P E GL KTV WYL N W Sbjct: 297 SSKLQRELGWEPSIRFEEGLEKTVAWYLGNQEW 329 >gi|291513883|emb|CBK63093.1| dTDP-glucose 4,6-dehydratase [Alistipes shahii WAL 8301] Length = 352 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 219/332 (65%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V +++ +D+LTYAGNL +L+++ ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVGKYPDCRIVNLDRLTYAGNLANLRDVENRPNYTFVKGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +RS E+ D +++ AAESHVDRSI F TN++GT LL+ R W+ + Sbjct: 65 YDAMRSLFAEYDIDGVIHLAAESHVDRSIRDPFTFAWTNVMGTLTLLQAAREHWNGTWEG 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF ISTDEVYG+L D LF+E Y+P SPYSA+KASSD+ V A+ TYG P Sbjct: 125 R----RFHHISTDEVYGALPFDGTLFTEQTRYDPHSPYSASKASSDHFVRAFHDTYGFPA 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++NCSNNYGPY FPEKLIPL I + + +YG G+N+RDWLYVEDH RA+ + + Sbjct: 181 VVTNCSNNYGPYQFPEKLIPLFINNIRHEKPLPVYGRGENIRDWLYVEDHARAIDTIFHR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 GR GE YNIGG NE +NID++ I +D L+ + +E LI ++ DR GHD RYAIDS Sbjct: 241 GRDGETYNIGGFNEWRNIDLIRVIIRTVDRLLGRPEGASEKLITYVTDRAGHDLRYAIDS 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+K E+GW P E G+ KTV WYL N W Sbjct: 301 RKLKEELGWEPSLQFEEGIEKTVRWYLANQEW 332 >gi|254973886|ref|ZP_05270358.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-66c26] gi|255091271|ref|ZP_05320749.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile CIP 107932] gi|255312930|ref|ZP_05354513.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-76w55] gi|255515689|ref|ZP_05383365.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-97b34] gi|255648783|ref|ZP_05395685.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-37x79] gi|260682003|ref|YP_003213288.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile CD196] gi|260685601|ref|YP_003216734.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile R20291] gi|306518900|ref|ZP_07405247.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile QCD-32g58] gi|260208166|emb|CBA60481.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile CD196] gi|260211617|emb|CBE01850.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile R20291] Length = 327 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 227/338 (67%), Gaps = 21/338 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS Y++N +V +D LTYAGNL +L EI S+ + F++ DI Sbjct: 3 KILITGGAGFIGSNFVHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDSSNYKFVKGDIS 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + +E + D +VNFAAESHVDRS+ D FI TNIIGT +LL+ + Sbjct: 63 NREQMYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLD---------AS 113 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ QISTDEVYG L D+ F+E P NPSSPYSA+KAS+D LV ++ TYG Sbjct: 114 IKYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +S CSNNYGPYHFPEKLIPL I +E + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 174 LLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVRDWLHVYDHCTAIDLI 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IGE YNIGG+NER N+++V I LLD ELI ++ DRPGHD RYAI Sbjct: 234 IHKGNIGEIYNIGGHNERSNLEVVKMILNLLD-------KSEELISYVNDRPGHDLRYAI 286 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D++KI++E+GW + + + G+ +TV WY++N WW+ + Sbjct: 287 DATKIENELGWKAKYDFDLGIKETVKWYIENESWWKAV 324 >gi|295092683|emb|CBK78790.1| dTDP-glucose 4,6-dehydratase [Clostridium cf. saccharolyticum K10] Length = 340 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 232/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYQIVNLDLLTYAGNLETLKPVEGKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I +E +PD +VNFAAESHVDRSI + F+ TN++GT LL+ +C Sbjct: 61 ADRKFIFDLFREEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLD------ACKE 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ + SSPYS++KAS+D VLA+ TY Sbjct: 115 FGIK---RYHQVSTDEVYGDLPLDRPDLFFTEETSLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YGDG NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEELPVYGDGANVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+ +V I LD P+S LIR+++DRPGHDRRYA Sbjct: 232 IIHKGRVGEVYNIGGHNERTNLQVVKTILKALDK--PES-----LIRYVKDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIETELGWKPKYNFDTGIAQTIQWYLDNEDWWK 321 >gi|86130455|ref|ZP_01049055.1| dTDP-glucose 4,6-dehydratase [Dokdonia donghaensis MED134] gi|85819130|gb|EAQ40289.1| dTDP-glucose 4,6-dehydratase [Dokdonia donghaensis MED134] Length = 347 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 163/333 (48%), Positives = 221/333 (66%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS L R + + + +D LTYAGNL +L ++ S+ ++F++ DI Sbjct: 1 MNILITGGAGFIGSHLVRLFLEVFPESHIYNLDALTYAGNLENLADVEASSNYTFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + ++Q D +++ AAESHVDRSI F+ TN+IGT LL + W Sbjct: 61 NDAPFLMTLFSKYQFDKVIHLAAESHVDRSIKNPLAFVQTNVIGTLNLLNAAKEIWKDNF 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DK F ISTDEVYG+L + GLF+E Y+P+SPY+A+KASSD+ V A+G TYG+P Sbjct: 121 NDK----LFYHISTDEVYGTLGETGLFTETTSYDPNSPYAASKASSDHFVRAYGETYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP FPEKLIPL I +I + +YGDG RDWL+V+DH RA+ + K Sbjct: 177 YIISNCSNNYGPNQFPEKLIPLFINNIILNKALPVYGDGNYTRDWLFVKDHARAIARIFK 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G++GE YNIGG NE KNID+V + +D L K + LI FI+DRPGHD+RYAID Sbjct: 237 EGKLGETYNIGGVNEWKNIDLVKLLCDKMDEKLSRKRNTSQSLITFIKDRPGHDKRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKI+ E+GW P E GL T+ WYL N+ W Sbjct: 297 ASKIEKELGWKPSVTFEEGLELTIDWYLANSSW 329 >gi|325126469|gb|ADY85799.1| Putative dTDP-glucose 4,6-dehydratase RmlB [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 332 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 176/337 (52%), Positives = 229/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK++ F F+++DI Sbjct: 1 MKIIVTGGAGFIGSNFVFYMMKKHPDYKIICLDKLTYAGNLSTLKDVMDKPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVD SI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDWSIENPEIFLQTNIIGTSVLMDFCR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYRIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R ++ + +YG+GQNVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALDDKPLPVYGEGQNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG +GE YNIGG+NE NIDIV I LD K YS LI + DR GHD+ YA Sbjct: 232 ILEKGTVGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDQHYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI+ E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPTKIRDELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|327404056|ref|YP_004344894.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] gi|327319564|gb|AEA44056.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] Length = 371 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 223/337 (66%), Gaps = 8/337 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS L R LVN Q++ D LTYAGNL +LK+I + F++ DI Sbjct: 24 MNILVTGGAGFIGSHLVRLLVNKYPSYQIITFDALTYAGNLANLKDIIDAPNHVFVKGDI 83 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + ++ A + +Q +++ AAESHVDRSI G EF+ TN++GT L+ + R +W + Sbjct: 84 TSEQDVKEAFENYQITDVIHLAAESHVDRSIEGPMEFVHTNVVGTVNLMNQARAYWKTMG 143 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F +STDEV+GSLD +G F+E Y+P SPYSA+KA+SD+ V A+ HTYG P Sbjct: 144 EHV-----FYHVSTDEVFGSLDLEGFFTETTSYDPRSPYSASKAASDHFVSAYYHTYGFP 198 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYG +H PEKLIPL I ++ + +YG+G NVRDWL+VEDH RA+ ++ Sbjct: 199 VKRSNCSNNYGSHHHPEKLIPLMINNILNKKPLPVYGEGINVRDWLWVEDHARAIDVIFH 258 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G IG YNIGG NE +NID++ E+ ++D L K ELI +++DR GHD RYAID Sbjct: 259 EGAIGCNYNIGGWNEWRNIDLIHELCTIMDFELGRKEGESAELISYVKDRAGHDLRYAID 318 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++K+ E+GW P E GL TV WY+++ W + + Sbjct: 319 ATKLFDELGWKPSITFEEGLRNTVKWYIEHQDWVKEV 355 >gi|262066739|ref|ZP_06026351.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC 33693] gi|291379540|gb|EFE87058.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC 33693] Length = 407 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 166/376 (44%), Positives = 234/376 (62%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 13 LITGAAGFIGANFLKYILKKYEDINVVVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 72 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 73 KEIERIFSENRIDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWT-VSKDE 131 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ +FLQISTDEVYGSL K + Sbjct: 132 NGYPIYREDVKFLQISTDEVYGSLSKDYDEAIELVIDDEAVKKVVKNRKNLKTYGDKFVT 191 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+KA +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 192 EESPLSPRSPYSASKAGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 251 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ ++GE YNIGG NE KNI+IV + + Sbjct: 252 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKVGEIYNIGGFNEEKNINIVKLVIDI 311 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAID SKI ++GW+P+ + E Sbjct: 312 LKEEITNNNEYKKVLKTDISNISYDLITYVQDRLGHDMRYAIDPSKIAKDLGWYPETDFE 371 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KTV WYL+N W Sbjct: 372 TGIRKTVKWYLENQEW 387 >gi|315039057|ref|YP_004032625.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1112] gi|312277190|gb|ADQ59830.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1112] Length = 345 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 177/337 (52%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ ++ +D LTYAGNL++LK + + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFIFYMMKKHPDYDIICLDSLTYAGNLSTLKSVMDNPHFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 RDRDGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G TY Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGENVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG+ GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 232 ILEKGKPGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPEKIHNELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|305665784|ref|YP_003862071.1| spore coat polysaccharide synthesis [Maribacter sp. HTCC2170] gi|88710548|gb|EAR02780.1| spore coat polysaccharide synthesis [Maribacter sp. HTCC2170] Length = 345 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 165/328 (50%), Positives = 219/328 (66%), Gaps = 6/328 (1%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS +Y L + K +V+ +DKLTYAGNL +L EI ++ +SF++ DICD Sbjct: 11 VLITGGAGFIGSNFIKYFLAKNSKTKVVNLDKLTYAGNLENLGEIGNNDRYSFVEGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +++ KE +++FAAESHVD SI + FI TNI GT +LLE + +W Sbjct: 71 YHLVKTIFKEKSIKGLIHFAAESHVDNSIKDPNSFIKTNIEGTSVLLEVAKEFWLEEPNV 130 Query: 122 KKDQF---RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K F RF ISTDEVYGSL +G+F+E+ Y P+SPYSA+KA+SD+LV ++ HTYG+ Sbjct: 131 PKGGFENSRFHHISTDEVYGSLGAEGVFTEESKYAPNSPYSASKAASDFLVRSYNHTYGL 190 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ +NCSNNYGP EKLIP I + + + +YGDG+NVRDWLYV DH AL V Sbjct: 191 NIVTTNCSNNYGPNQHDEKLIPTVIRKALNDEPIPIYGDGKNVRDWLYVIDHCEALNTVF 250 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KGR GE Y IGGN E N+ I +I +LD L PK + + I F+E+R GHD RYAI Sbjct: 251 NKGRTGETYVIGGNCEYNNLYIAIKICDILDELEPKKNGKYQDQITFVENRLGHDYRYAI 310 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SKI E+ W P+EN ESG+ KT+ WY Sbjct: 311 DFSKISEELNWEPKENFESGIRKTIKWY 338 >gi|298481048|ref|ZP_06999242.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] gi|298272622|gb|EFI14189.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] Length = 377 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 167/355 (47%), Positives = 222/355 (62%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + +++ +D LTYAGNL +LK+I + F+++DICD Sbjct: 4 IVITGGAGFIGSHVVRLFVNKYPEYKIINLDTLTYAGNLANLKDIEDRPNYKFVKMDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ Q D+I++ AAESHVDRSI F TN++GT LL+ +L+W L D Sbjct: 64 FDAFYKLMQDEQVDSIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAVKLYWESLP-D 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG-------------------------LFSEDMPYNPSSP 156 K + RF ISTDEVYG+L F E YNP SP Sbjct: 123 KYEGKRFYHISTDEVYGALTMNHPDGIEPPFITKASSETHHLAYGDDFFYETTRYNPHSP 182 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYGIP +++NCSNNYGPY FPEKLIPL I + + +YG+ Sbjct: 183 YSASKASSDHFVRAFHDTYGIPTIVTNCSNNYGPYQFPEKLIPLFINNIRYRKPLPVYGN 242 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G+NVRDWL+VEDH A+ L+ KG I E YNIGG NE KNIDI+ I +D L+ + Sbjct: 243 GENVRDWLFVEDHAHAIDLIFHKGTIAETYNIGGFNEWKNIDIIKVIINTVDRLLGRVEG 302 Query: 277 H-TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS+K++ E+GW P E G+ KTV WYLDN W Sbjct: 303 EDMDLITYVTDRLGHDARYAIDSTKLQKELGWEPSLQFEEGIEKTVRWYLDNQEW 357 >gi|218288132|ref|ZP_03492431.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218241491|gb|EED08664.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 164/334 (49%), Positives = 220/334 (65%), Gaps = 20/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS RY+ +V +D LTYAGNL++LK+I + ++F++ DI Sbjct: 1 MKLLITGGAGFIGSNFVRYMRQTHPEDAVVNVDALTYAGNLSNLKDIDEGEHYTFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E D IVNFAAESHVDRSIL F+ TN++GT +LL+ R Sbjct: 61 TDVAAMDDIVAE-GFDVIVNFAAESHVDRSILDPGAFVRTNVMGTQVLLDAAR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +F+Q+STDEVYG+L D F+E P P+SPYSA+KA +D LV A+ TYG+ Sbjct: 113 --RHGVKKFIQVSTDEVYGTLGPDDAPFTETTPLRPNSPYSASKAGADLLVRAYHETYGM 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGPY FPEKLIPL I +E + +YGDG +RDWL+V DH + V+ Sbjct: 171 HVNITRCSNNYGPYQFPEKLIPLMIANALEDKPLPVYGDGLQIRDWLHVWDHCAGIDHVI 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GR GE YNIGGNNER N+DIV I L P++ LIR +EDRPGHDRRYAID Sbjct: 231 RHGRSGEVYNIGGNNERTNLDIVLTILRYLGK--PEA-----LIRHVEDRPGHDRRYAID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++KI++E+GW P+ E G+ +T+ WYL + WW Sbjct: 284 ATKIRTELGWQPKYAFEDGIRETIEWYLTHRDWW 317 >gi|218896253|ref|YP_002444664.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus G9842] gi|218546040|gb|ACK98434.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus G9842] Length = 323 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQNHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHIIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKIGKFTEKTPLAPNSPYSSSKASADLIALSYYKTYHLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+ L Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKLL 320 >gi|225376961|ref|ZP_03754182.1| hypothetical protein ROSEINA2194_02603 [Roseburia inulinivorans DSM 16841] gi|225211282|gb|EEG93636.1| hypothetical protein ROSEINA2194_02603 [Roseburia inulinivorans DSM 16841] Length = 361 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 222/337 (65%), Gaps = 10/337 (2%) Query: 4 IVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS Y+ D +I+++ +D LTYAGNL +LK+I + ++F++ DI D Sbjct: 5 LVTGGAGFIGSNYIHYMFRKYDNEIRIINVDALTYAGNLENLKDIENRDNYTFIKADITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ I +E D +V+FAAESHVDRSI + F+ TN++GT ++L + W Sbjct: 65 KDAIMKIFEENDIDRVVHFAAESHVDRSIKNPEVFVKTNVLGTAVMLNCAKKAWELPDGS 124 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +FL +STDEVYGSL K F E PY P SPYSA+KASSD LV A+ TY P Sbjct: 125 FKTGKKFLHVSTDEVYGSLPDDGKSYFYETTPYQPHSPYSASKASSDMLVKAYIDTYHFP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++N SNNYGPY FPEKLIPL I + G + +YGDG N+RDWLYV+DH + + +V + Sbjct: 185 ANVTNTSNNYGPYQFPEKLIPLIINNALHGKKLPVYGDGLNIRDWLYVDDHAKGIDMVQE 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRR 293 G++GE YNIGG+NE++NI+I+ I L ++P K+ +LI ++EDR GHDRR Sbjct: 245 HGKLGESYNIGGHNEKRNIEIINIIIETLQEILPDTDPRKANVSKDLITYVEDRKGHDRR 304 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAI KIK+EIGW P+ + G+ KT+ WYL++ W Sbjct: 305 YAIAPDKIKAEIGWEPETMFKDGIKKTIAWYLEHEDW 341 >gi|160902404|ref|YP_001567985.1| dTDP-glucose 4,6-dehydratase [Petrotoga mobilis SJ95] gi|160360048|gb|ABX31662.1| dTDP-glucose 4,6-dehydratase [Petrotoga mobilis SJ95] Length = 348 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 226/338 (66%), Gaps = 9/338 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQS--NLFSFLQV 57 M ++VTG AGFIGS Y + K + ++ +DKLTYAGNL++L ++++ N F+F++ Sbjct: 1 MSILVTGVAGFIGSNFVYYYLRKHKDKKIIGLDKLTYAGNLDNLSKLNEEEKNRFTFIKG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E + KE + + I+NFAAESHVDRSI F+ TNI+GT LL + ++ Sbjct: 61 DINDIELLEKIYKENEIEGIINFAAESHVDRSIHDPQIFLKTNILGTQTLLHVFKKYY-- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D++ + +FLQISTDEVYG+L G F+E P +P SPYSA+KAS+D +V A+ TYG Sbjct: 119 ---DERKRQKFLQISTDEVYGALGPTGYFTEKTPLDPHSPYSASKASADLIVKAYHDTYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + ++ CSNNYGPY FPEKLIPL I + + +YGDG+ +RDWLYVEDH +A+ LV Sbjct: 176 LNTNITRCSNNYGPYQFPEKLIPLMINNALNHKELPVYGDGKQIRDWLYVEDHCKAIELV 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +KGR GE YNIGG+NE++NI+IV I L + LI+ ++DR GHDRRYAI Sbjct: 236 FEKGRSGEVYNIGGHNEKENIEIVKIIIEYLQEKTKGEKINEGLIKHVKDRLGHDRRYAI 295 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +KIK E+GW P+ E G+ +T+ WYL+N W + Sbjct: 296 DPTKIKEELGWEPETKFEEGIKRTIDWYLENKEWMEKV 333 >gi|331004509|ref|ZP_08327979.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410687|gb|EGG90110.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae oral taxon 107 str. F0167] Length = 340 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 169/336 (50%), Positives = 231/336 (68%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG Y+VN +++ +D LTYAGNL +LK + + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHYMVNQYPEDMIINLDLLTYAGNLETLKPVENAPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I +E +PD ++NFAAESHVDRSI + F+ TN++GT LL+ R Sbjct: 61 ADRDFIFKLFEEEKPDVVINFAAESHVDRSITDPESFVRTNVMGTTTLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G NVRDWLYV DH +A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLIISRALNDEELPVYGKGDNVRDWLYVTDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V++KGR+GE YNIGG+NER N+++V I L+ P+S LI+F+ DRPGHDRRYA Sbjct: 232 VVRKGRVGEVYNIGGHNERTNLEVVKTILKALNK--PES-----LIKFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +K++ E+GW P+ ++G+ KT+ WYL+N WW Sbjct: 285 IDPTKMEKELGWKPEYTFDTGIVKTIEWYLNNKDWW 320 >gi|167461464|ref|ZP_02326553.1| dTDP-glucose 4,6-dehydratase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381927|ref|ZP_08055880.1| dTDP-glucose 4 6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154128|gb|EFX46451.1| dTDP-glucose 4 6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 319 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/327 (49%), Positives = 224/327 (68%), Gaps = 19/327 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIGS RY+++ + +V+ +D LTYAGNL L ++S ++F+ ++ Sbjct: 1 MRLLVTGGAGFIGSHFIRYILHRYSRYEVINLDSLTYAGNLERLSDVSDDLRYTFIHGNV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + A +PDAIV+FAAESHVDRSI D F+ TN++GT +LLE R Sbjct: 61 AAKRDVWQAFT-LKPDAIVHFAAESHVDRSIADPDLFVRTNMLGTQVLLEAAR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +++QISTDEVYG+L + GLF+E+ P P+SPYSA+KAS+D L ++ TYG+P Sbjct: 113 --EHGIQKYIQISTDEVYGTLGETGLFTEETPLAPNSPYSASKASADLLARSYYETYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYG + +PEKLIPL I R ++ + +YGDG ++RDWLYVEDH RA+ LVL Sbjct: 171 VTITRCSNNYGSHQYPEKLIPLMIFRALKDQPLPIYGDGFHIRDWLYVEDHCRAVDLVLH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNIGG NER N+++V I L + P S LIRF+ DRPGHDRRY ID+ Sbjct: 231 GGRDGEVYNIGGRNERTNLELVRLI--LKELGKPDS-----LIRFVPDRPGHDRRYGIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 KI+ E+GW+P +E GL +T+ WY+ Sbjct: 284 GKIRHELGWYPDHTLEEGLVQTIRWYV 310 >gi|150020963|ref|YP_001306317.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] gi|149793484|gb|ABR30932.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] Length = 352 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 227/334 (67%), Gaps = 5/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEIS--QSNLFSFLQV 57 M L+VTG AGFIGS Y + K + +V +DKLTYAGNL +L +++ Q F F++ Sbjct: 1 MTLLVTGCAGFIGSNFVYYYLEKYKDRKIVGLDKLTYAGNLENLGKLTVEQRKRFKFIKG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI ++E + +E++ D ++NFAAESHVDRSI F+ TNI+GT LL+ + +W Sbjct: 61 DINNKELLEYIFEEYEIDGVINFAAESHVDRSIYDPQIFLKTNILGTQTLLDVAKKYWYR 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K+ + +FLQ+STDEVYGSL G F+E P +P SPYSA+KAS+D +V A+ TY Sbjct: 121 DGKWKEGK-KFLQVSTDEVYGSLGPTGYFTEKTPLDPHSPYSASKASADLIVKAYHDTYK 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ ++ CSNNYGPY FPEKLIPL I + + +YGDG+ +RDWLYV+DH RA+ +V Sbjct: 180 MPINITRCSNNYGPYQFPEKLIPLMIWNTLNHKELPVYGDGRQIRDWLYVKDHCRAIDMV 239 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +KG+IGE YNIGG+NE++NI IV +I +L + LIR ++DRPGHDRRY I Sbjct: 240 YEKGKIGEVYNIGGHNEKENIYIVKKIIEILRKKTGDKEINEGLIRHVKDRPGHDRRYGI 299 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D +KIK E+GW P+ + G+ T+ WYL+N W Sbjct: 300 DPTKIKEELGWEPEVMFDEGIEMTIEWYLNNVEW 333 >gi|256819061|ref|YP_003140340.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea DSM 7271] gi|256580644|gb|ACU91779.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea DSM 7271] Length = 330 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/329 (48%), Positives = 221/329 (67%), Gaps = 8/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + +DKLTYAGNL ++ +++ + ++F+Q DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPDYHIFNLDKLTYAGNLENVADVANAPNYTFIQADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ E D I++ AAESHVDRSI F TN++GT LL+ R W Q Sbjct: 65 YERMKALFAENHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKDNMQG 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L+ G LF+E PY+P SPYSA+KASSD+ V A+ +TY +PV Sbjct: 125 K----RFYHVSTDEVYGALEIGEALFTEQTPYDPQSPYSASKASSDHFVRAYHNTYKLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG + +PEKLIP+ I +++ + +YG G+N+RDWL+VEDH RA+ + + Sbjct: 181 VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDTIFHQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGG NE +NID+V I +D + + +E LI F+ DR GHD RYAID+ Sbjct: 241 GKDGDTYNIGGFNEWRNIDLVKVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +K+K E+GW P E G+ KTV WYL N Sbjct: 301 TKLKKELGWEPSLQFEEGIQKTVKWYLSN 329 >gi|291459804|ref|ZP_06599194.1| dTDP-glucose 4,6-dehydratase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417594|gb|EFE91313.1| dTDP-glucose 4,6-dehydratase [Oribacterium sp. oral taxon 078 str. F0262] Length = 338 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 164/336 (48%), Positives = 228/336 (67%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+ IVTGGAGFIG + VN + Q + +DKLTYAGNL +LK + + + F++ DI Sbjct: 1 MKYIVTGGAGFIGGNYMHFAVNTYPEDQWICLDKLTYAGNLETLKPLEGKSNYHFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I S ++ +PD ++NFAAESHVDRS+ D F+ TN++GT LL+ +C S Sbjct: 61 ADREFIFSLFEKEKPDFVINFAAESHVDRSVTDPDIFVRTNVMGTVTLLD------ACRS 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYG L D+ F+E+ SSPYSA+KAS+D V+A+ T+ Sbjct: 115 FGIR---RYHQVSTDEVYGDLPLDRPDLFFTEENQIKASSPYSASKASADLFVMAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIPV +S CSNNYGPYHFPEKLIPL I+R ++ + +YG+G NVRDWLYV DH RA+ Sbjct: 172 GIPVTISRCSNNYGPYHFPEKLIPLVISRALKEEKIPVYGNGANVRDWLYVTDHCRAIDC 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++++GR GE YNIGG+NER N+++V I L P+S LI +++DRPGHD+RYA Sbjct: 232 IVREGRSGEVYNIGGHNERSNLEVVKTILHALGK--PES-----LIEYVKDRPGHDQRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D +KI+ E+ W P+ + ++G+ T+ WYL N WW Sbjct: 285 MDPAKIERELHWEPEYSFDTGIPVTIDWYLKNREWW 320 >gi|10505382|gb|AAG18457.1|AF306787_1 AprE [Streptoalloteichus tenebrarius] Length = 332 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 161/343 (46%), Positives = 225/343 (65%), Gaps = 25/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQS--NLFS 53 MR++VTGGAGFIGS R L+ +V+V+DKLTYAGN +L ++ + + Sbjct: 1 MRVLVTGGAGFIGSHYVRELLGGAYPAFADAEVVVLDKLTYAGNEANLAPVADAAGSRLR 60 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F++ DICD E +R+ + D +V+FAAESHVDRSILGA EF+ TN++GT LL+ Sbjct: 61 FVRGDICDAELVRTLMTGV--DVVVHFAAESHVDRSILGATEFVMTNVLGTQTLLQ---- 114 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + +F+ +STDEVYGS+D+G + ED P P+SPYSA+KASSD L A+ Sbjct: 115 -----AALEAGVGKFVHVSTDEVYGSIDEGSWPEDHPLEPNSPYSASKASSDLLARAFHR 169 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+PV ++ CSNNYGPY FPEK+IPL +T +++G V LYGDG NVRDWL+V+DH R + Sbjct: 170 THGLPVCVTRCSNNYGPYQFPEKVIPLFVTNLMDGRPVPLYGDGLNVRDWLHVDDHCRGI 229 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV++ GR GE YNIGG E N + L + L+ + ++ + DR GHDRR Sbjct: 230 QLVVEGGRPGEVYNIGGGTELTNRE-------LTERLLAVMGADWSMVEQVPDRKGHDRR 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 Y++D +KI +E+G+ P+ E GL +TV WY +N WW PL + Sbjct: 283 YSVDITKISTELGYRPRVPFEEGLARTVAWYRENREWWEPLKR 325 >gi|225350725|ref|YP_002720714.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae WA1] gi|225216409|gb|ACN85142.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae WA1] gi|330368671|gb|AEC11790.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae] Length = 356 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 175/358 (48%), Positives = 240/358 (67%), Gaps = 15/358 (4%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIGS RY++ +D K ++ ID LTYAGN +L +I + + + F +V+ Sbjct: 7 ILVTGGCGFIGSNFIRYILEKSDYKGNIINIDALTYAGNRENLIDIEKKYKDRYFFEKVN 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + I ++ PD IV+FAAESHVDRSI G +F+ TNI+GTFILLE R W Sbjct: 67 ICDDKKINEIFSKYNPDCIVHFAAESHVDRSIYGPKDFLETNIMGTFILLEAARKLW--- 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ K+ F ISTDEVYGSL + G F E PY+P SPYS++KASSD++V A+ HTY + Sbjct: 124 -ENNKENKLFHHISTDEVYGSLGETGYFYETTPYDPRSPYSSSKASSDHIVKAYYHTYNL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +SNCSNNYGPY FPEKLIPL I+ ++E + +YGDG+N+RDW++VEDH A+ ++ Sbjct: 183 PVTISNCSNNYGPYQFPEKLIPLMISNIVEEKDLPVYGDGKNIRDWIFVEDHNNAVIDII 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KGR+GE YNIGG NE NID+V + L A + K + +LI+F++DR GHDRRYAI Sbjct: 243 HKGRVGETYNIGGENEITNIDMVNILCEKLSAKMNKEKDYYKKLIKFVKDRAGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 + KIK E+GW + + + ++ T+ WYL+N W + +Y KW LN S Sbjct: 303 NCDKIKKELGWERKYDFNTAIDITIDWYLNNKQWIDNI-----KSGEYKKWIELNYSS 355 >gi|330368661|gb|AEC11782.1| dTDP-glucose 4,6-dehydratase [Brachyspira hyodysenteriae] Length = 356 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 175/358 (48%), Positives = 240/358 (67%), Gaps = 15/358 (4%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVD 58 ++VTGG GFIGS RY++ +D K ++ ID LTYAGN +L +I + + + F +V+ Sbjct: 7 ILVTGGCGFIGSNFIRYILEKSDYKGNIINIDALTYAGNRENLIDIEKKYKDRYFFEKVN 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + I ++ PD IV+FAAESHVDRSI G +F+ TNI+GTFILLE R W Sbjct: 67 ICDDKKINEIFSKYNPDCIVHFAAESHVDRSIYGPKDFLETNIMGTFILLEAARKLW--- 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ K+ F ISTDEVYGSL + G F E PY+P SPYS++KASSD++V A+ HTY + Sbjct: 124 -ENNKENKLFHHISTDEVYGSLGETGYFYETTPYDPRSPYSSSKASSDHIVKAYYHTYNL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV +SNCSNNYGPY FPEKLIPL I+ ++E + +YGDG+N+RDW++VEDH A+ ++ Sbjct: 183 PVTISNCSNNYGPYQFPEKLIPLMISNIVEEKDLPVYGDGKNIRDWIFVEDHNNAVIDII 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAI 296 KGR+GE YNIGG NE NID+V + L A + K + +LI+F++DR GHDRRYAI Sbjct: 243 HKGRVGETYNIGGENEITNIDMVNILCEKLSAKMNKEKDYYKKLIKFVKDRSGHDRRYAI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMS 354 + KIK E+GW + + + ++ T+ WYL+N W + +Y KW LN S Sbjct: 303 NCDKIKKELGWERKYDFNTAIDITIDWYLNNKQWIDNI-----KSGEYKKWIELNYSS 355 >gi|294783354|ref|ZP_06748678.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA] gi|294480232|gb|EFG28009.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA] Length = 399 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 170/403 (42%), Positives = 242/403 (60%), Gaps = 57/403 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ + + V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LVTGAAGFIGANFLKYILKKYEDVNVIVVDALTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 65 KEIERIFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGIKYLQVSTDEVYGSLSKDYDEAIELVIDDEDVKKVVKNRKNLKTYGDKFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 184 ENSPADPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL+ ++GE YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLRNAKVGEVYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAID SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDLSNISYDLITYVQDRLGHDMRYAIDPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNR 357 +G+ KTV WYL+N W + DY K+ EM N+ Sbjct: 364 TGIRKTVKWYLENQEWVNEV-----ASGDYQKY--YEEMYGNK 399 >gi|298375209|ref|ZP_06985166.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_19] gi|301310778|ref|ZP_07216717.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] gi|298267709|gb|EFI09365.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_19] gi|300832352|gb|EFK62983.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] Length = 374 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 164/355 (46%), Positives = 220/355 (61%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R LVN + + +DKLTYAGNL +LK++ + F+++DICD Sbjct: 6 IVITGGAGFIGSHVVRLLVNKYPEYNIFNLDKLTYAGNLANLKDVEDKPNYRFIRMDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ Q D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 66 FKAFYQLMQDKQIDGIIHLAAESHVDRSIKDPFTFAQTNVMGTLALLQAAKLYWESLPER 125 Query: 122 KKDQFRFLQISTDEVYGSLDKG-------------------------LFSEDMPYNPSSP 156 + + RF ISTDEVYG+L F E YNP SP Sbjct: 126 YEGK-RFYHISTDEVYGALTMNYPEGIEPPFTTTASSSEHHLAYGDDFFYETTKYNPHSP 184 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 185 YSASKASSDHFVRAYHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNICHRKPLPVYGK 244 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSY 275 G+NVRDWL+VEDH RA+ + G+I E YNIGG NE KNIDI+ + +D L+ K Sbjct: 245 GENVRDWLFVEDHARAIDTIFHHGKIAETYNIGGFNEWKNIDIIKVLINTVDRLLGRKEG 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS+K++ E+GW P E G+ KTV WYLDN W Sbjct: 305 EDLDLITYVTDRLGHDARYAIDSTKLQKELGWEPSLQFEEGIEKTVRWYLDNQEW 359 >gi|145219286|ref|YP_001129995.1| dTDP-glucose 4,6-dehydratase [Prosthecochloris vibrioformis DSM 265] gi|145205450|gb|ABP36493.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeovibrioides DSM 265] Length = 350 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 220/334 (65%), Gaps = 8/334 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS + R+ + +V +D LTYAGNL +L+++ + + F++ DI Sbjct: 1 MHLLVTGGAGFIGSHVIRHFLGAHGDCRVTNLDSLTYAGNLANLRDVEDDDRYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + E + D +++ AAESHVDRSI F+ TN++GT LL + W Sbjct: 61 TDGEFLMQLFAETRFDGVIHLAAESHVDRSIANPTAFVQTNVLGTVNLLNAAKASWE--- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +D + F +STDEVYGSL GLF+E+ PY+P SPYSA+KASSD+ V A+ TYG+ Sbjct: 118 KDFSGRL-FYHVSTDEVYGSLPAGDGLFTEESPYDPHSPYSASKASSDHCVRAYHDTYGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV++SNCSNNYGP+ FPEKLIPL I + G + LYG G+NVRDWL+VEDH RA+ + Sbjct: 177 PVVISNCSNNYGPFQFPEKLIPLFINNIQLGKPLPLYGKGENVRDWLWVEDHARAIDTIY 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAI 296 G+IGE YNIGG+NE NI +V + ++D + + +E LI F+ DR GHD RYAI Sbjct: 237 HHGKIGETYNIGGHNEWSNISLVRLLCRIMDERLGRDEGSSEKLISFVTDRAGHDLRYAI 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SK+K E+GW P E G+ +TV WYL N W Sbjct: 297 DASKLKRELGWVPSITFEEGIRETVDWYLSNGEW 330 >gi|297199644|ref|ZP_06917041.1| dTDP-glucose 4,6-dehydratase [Streptomyces sviceus ATCC 29083] gi|197713428|gb|EDY57462.1| dTDP-glucose 4,6-dehydratase [Streptomyces sviceus ATCC 29083] Length = 328 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 221/337 (65%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 R++VTGGAGFIGS R ++ + V V+DKLTYAGN +L E+ + F+F+Q Sbjct: 3 TRILVTGGAGFIGSHYVRTVLGPQGPGDVSVTVLDKLTYAGNPANLDEVREHPGFAFVQG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + E D +V+FAAESHVDRSI G EF+ TN++GT L++ Sbjct: 63 DICDPELVGKLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVVGTHTLID-------- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ Sbjct: 113 -AAHRAGIKTFVHISTDEVYGSIDEGSWPETHPLEPNSPYSSAKASSDLIALSYHRTHGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYG +HFPEK+IPL +T +++G V LYGDG NVRDWL+++DHV+ + LV Sbjct: 172 DVRVTRCSNNYGHHHFPEKVIPLFVTNLLDGKKVPLYGDGGNVRDWLHIDDHVQGIELVR 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LL A + E ++EDR GHDRRY++D Sbjct: 232 TKGRAGEVYNIGGGTELSNKELT---GLLLKACGADWETSVE---YVEDRKGHDRRYSVD 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI+ E+G+ P+++ E GL +TV WY DN WW PL Sbjct: 286 CTKIREELGYEPRKSFEQGLAETVQWYRDNRAWWEPL 322 >gi|88604300|ref|YP_504478.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] gi|88189762|gb|ABD42759.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] Length = 351 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 167/335 (49%), Positives = 218/335 (65%), Gaps = 7/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVI--DKLTYAGNLNSLKEIS--QSNLFSFLQ 56 M + +TG AGFIGS + + D+ + ++I D LTYAGN +L + Q + F F++ Sbjct: 1 MYIFITGVAGFIGSNFVYHYL-DIHPEDIIIGYDALTYAGNPENLAALPEDQKSRFIFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D E ++S + ++NFAAESHVDRSI F+ TNI+GT LL+ + W Sbjct: 60 GDITDPEQVQSIFSRYDIQGVINFAAESHVDRSIHDPAIFLKTNILGTHTLLDAAQAAWR 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KK+ FLQ+STDEVYGSL GLFSE P +P SPYSA+KA SD + A+ T+ Sbjct: 120 KNGTWKKNT-TFLQVSTDEVYGSLGPTGLFSETTPLDPHSPYSASKAGSDLIAKAYHDTF 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP++++ CSNNYGPY FPEKLIPL ITR +E + +YGDG+ +RDWLYV DH RA+ L Sbjct: 179 GIPLVITRCSNNYGPYQFPEKLIPLTITRALEHQSIPVYGDGRQIRDWLYVMDHCRAIDL 238 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 KG+ GE YNIGG+NER+NI IV I LL + + LI ++ DR GHDRRYA Sbjct: 239 AFHKGKPGEVYNIGGSNERENIIIVKTILRLLHEMTGDPEINESLITYVTDRLGHDRRYA 298 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SKIK E GW PQ E G+ KT+ WYL++ W Sbjct: 299 IDASKIKREFGWAPQTPFEEGIRKTIRWYLEHQSW 333 >gi|258517207|ref|YP_003193429.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257780912|gb|ACV64806.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 330 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 229/339 (67%), Gaps = 23/339 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS +Y++++ + +++ +D LTYAGNL +LK++ ++F+ DIC Sbjct: 3 KILVTGGAGFIGSNFIKYMLDEYSEYKIINLDLLTYAGNLENLKDVENHPNYTFVLGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E ++NFAAESHVDRSI F+ TN++GT +LL+ Sbjct: 63 DAILVNQLVSE-GVKYVINFAAESHVDRSIEDPGAFVRTNVMGTQVLLDAV--------- 112 Query: 121 DKKDQF-RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K++Q +F+QISTDEVYGSL + G F+ED P P+SPYSA+KA +D LV A+ T+ +P Sbjct: 113 -KRNQINKFVQISTDEVYGSLGETGYFTEDTPLAPNSPYSASKAGADTLVRAYHETFNLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLI L I E + +YGDG NVRDWL+V+DH A+ +VL Sbjct: 172 VNITRCSNNYGPYQFPEKLILLMIANAQEDKELPVYGDGLNVRDWLHVKDHCCAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG++GE YNIGGNNE+KNI+IV LI +S + E LI+F++DRPGHDRRYAID Sbjct: 232 KGKLGEVYNIGGNNEKKNIEIV--------RLIIESLNKPESLIKFVKDRPGHDRRYAID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 ++KIK E GW P + E G+ T+ WYLDN W + K Sbjct: 284 ATKIKMEFGWVPSYSFEKGIKDTIKWYLDNKDWMGKIRK 322 >gi|228899901|ref|ZP_04064145.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] gi|228859741|gb|EEN04157.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] Length = 323 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 218/336 (64%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF + +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQNHPNYSFAKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHIIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKIGKFTEKTPLAPNSPYSSSKASADLIALSYYKTYHLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+ L Sbjct: 285 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKLL 320 >gi|150020410|ref|YP_001305764.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] gi|149792931|gb|ABR30379.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] Length = 339 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 163/340 (47%), Positives = 230/340 (67%), Gaps = 5/340 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEIS--QSNLFSFLQV 57 M L+VTG AGFIGS Y + K + +V +DKLTYAGNL +L +++ Q F F++ Sbjct: 1 MTLLVTGCAGFIGSNFVYYYLEKYKDRKIVGLDKLTYAGNLENLGKLTVEQRKRFKFIKG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI ++E + +E++ D ++NFAAESHVDRSI F+ TNI+GT LL+ + +W Sbjct: 61 DINNKELLEYIFEEYEIDGVINFAAESHVDRSIYDPQIFLKTNILGTQTLLDVAKKYWYR 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K+ + +FLQ+STDEVYGSL G F+E P +P SPYSA+KAS+D +V A+ TY Sbjct: 121 DGKWKEGK-KFLQVSTDEVYGSLGPTGYFTEKTPLDPHSPYSASKASADLIVKAYHDTYK 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ ++ CSNNYGPY FPEKLIPL I + + +YGDG+ +RDWLYV+DH RA+ +V Sbjct: 180 MPINITRCSNNYGPYQFPEKLIPLMIWNTLNHKELPVYGDGRQIRDWLYVKDHCRAIDMV 239 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +KG++GE YNIGG+NE++NI IV +I +L + LIR ++DRPGHDRRY I Sbjct: 240 YEKGKVGEVYNIGGHNEKENIYIVKKIIEILRKKTGDKEINEGLIRHVKDRPGHDRRYGI 299 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 D +KIK E+GW P+ + G+ T+ WYL+N W + + K Sbjct: 300 DPTKIKEELGWEPEIMFDEGIELTIEWYLENIDWMKKVIK 339 >gi|254374806|ref|ZP_04990287.1| dTDP-D-glucose 4,6-dehydratase [Francisella novicida GA99-3548] gi|151572525|gb|EDN38179.1| dTDP-D-glucose 4,6-dehydratase [Francisella novicida GA99-3548] Length = 348 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/327 (48%), Positives = 222/327 (67%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 23 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWWSCLSQ 120 + LKE + D IV+FAAESHVD SI F+ TN+IGTF LL+ R W L Sbjct: 83 EVLVYQTLKEHKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 142 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ RF +STDEVYG+L D F+E Y P+SPYSA+KA SD++ A+ HTY +P Sbjct: 143 DET-SCRFHHVSTDEVYGTLAKDDPAFTETKAYEPNSPYSASKAGSDHIARAYHHTYKLP 201 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A++ +++ Sbjct: 202 VTISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIHTIVE 261 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGG NE N+ +V I L+D P++ H++LI F+EDR GHD RYAID+ Sbjct: 262 KGVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSKLITFVEDRKGHDWRYAIDN 321 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI++E+GW P ++ + +T+ +YL Sbjct: 322 SKIQNELGWKPSQDFDKMFRQTIEFYL 348 >gi|319953126|ref|YP_004164393.1| dtdp-glucose 4,6-dehydratase [Cellulophaga algicola DSM 14237] gi|319421786|gb|ADV48895.1| dTDP-glucose 4,6-dehydratase [Cellulophaga algicola DSM 14237] Length = 348 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 162/333 (48%), Positives = 220/333 (66%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R +V + + +D LTYAGNL +LK+I S ++FL+ DI Sbjct: 1 MNILITGGAGFIGSHVIRRMVQNYPNYNIYNLDALTYAGNLENLKDIEHSENYTFLKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I + +++ D +++ AAESHVDRSI F+ TN+IGT LL ++ W Sbjct: 61 TDAPFIDAIFNKYKFDRVIHLAAESHVDRSITDPLSFVKTNVIGTVNLLNASKELWKENL 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K F +STDEVYGSL GLF+E Y+P+SPYSA+KASSD+ V A+G TY +P Sbjct: 121 EGK----LFYHVSTDEVYGSLGATGLFTETTSYDPNSPYSASKASSDHFVRAYGETYNLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP HFPEKLIPL I +I + +YGDG RDWLYVEDH A+ L Sbjct: 177 FIISNCSNNYGPNHFPEKLIPLFINNIINKKSLPVYGDGNYTRDWLYVEDHAIAIDLAFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G+ E YNIGG NE KN+D+V + L+D + + +E LI +++DRPGHD RYAID Sbjct: 237 EGKNHETYNIGGFNEWKNLDLVKLLCKLMDTKLKRPAGDSEKLITYVKDRPGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++KI E+GW P E GL+KT+ W+L+N W Sbjct: 297 ATKINKELGWKPSVTFEEGLSKTIDWFLNNRDW 329 >gi|302560672|ref|ZP_07313014.1| dTDP-glucose 4,6-dehydratase [Streptomyces griseoflavus Tu4000] gi|302478290|gb|EFL41383.1| dTDP-glucose 4,6-dehydratase [Streptomyces griseoflavus Tu4000] Length = 337 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 224/337 (66%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 +R++VTGGAGFIGS R L+ ++V V+DKLTYAGN +L E+ F+F++ Sbjct: 11 VRILVTGGAGFIGSHYVRTLLGPEGPGDVEVTVLDKLTYAGNPANLDEVRGHPGFAFVRG 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + E D +V+FAAESHVDRSI G EF+ TN++GT L++ Sbjct: 71 DICDPELVGGLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVVGTHTLVD-------- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ Sbjct: 121 -AAHRAGVATFVHISTDEVYGSIDEGSWPETHPLEPNSPYSSAKASSDLIALSYHRTHGL 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYG +HFPEK+IPL +T++++G V LYGDG NVRDWL+++DHV+ + LV Sbjct: 180 DVRVTRCSNNYGHHHFPEKVIPLFVTQLLDGRKVPLYGDGGNVRDWLHIDDHVQGIELVR 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LL+A + E ++EDR GHDRRY++D Sbjct: 240 TKGRAGEIYNIGGGTELSNKELT---GLLLEACGADWDTSVE---YVEDRKGHDRRYSVD 293 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI+ E+G+ P+++ E GL +TV WY DN WW PL Sbjct: 294 CTKIREELGYEPRKSFERGLAETVQWYRDNRDWWEPL 330 >gi|237739586|ref|ZP_04570067.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 2_1_31] gi|229423194|gb|EEO38241.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 2_1_31] Length = 399 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 169/403 (41%), Positives = 242/403 (60%), Gaps = 57/403 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LLTGAAGFIGANFLKYILKKYEDINVIVVDALTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D ++NFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 65 KEIERIFSENKVDYVINFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGIKYLQVSTDEVYGSLSKDYDEAIELVIDDEDVKKVVKNRKNLKTYGNKFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 184 ENSPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL+ ++GE YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLRNAKVGEVYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAID SKI ++GW+P+ + E Sbjct: 304 LKEEITNNAEYKKVLKTDLSNISYDLITYVQDRLGHDMRYAIDPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNR 357 +G+ KTV WYL+N W + DY K+ EM N+ Sbjct: 364 TGIRKTVKWYLENQEWVNEV-----ASGDYQKY--YEEMYGNK 399 >gi|291288656|ref|YP_003505472.1| dTDP-glucose 4,6-dehydratase [Denitrovibrio acetiphilus DSM 12809] gi|290885816|gb|ADD69516.1| dTDP-glucose 4,6-dehydratase [Denitrovibrio acetiphilus DSM 12809] Length = 357 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 163/336 (48%), Positives = 222/336 (66%), Gaps = 13/336 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 ++VTGG+GFIG+ RY + D +++ +DKLTYAGN +L++I + + F Sbjct: 7 IMVTGGSGFIGANFIRYALKDTNFSGRIINVDKLTYAGNPENLEDIINDIDESRYVFCHK 66 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD + + ++ D +++FAAESHVDRSI G EF+ TNI GTF LLE R W Sbjct: 67 DICDYDEMNKVFMKYDVDCVIHFAAESHVDRSIHGPGEFVRTNINGTFTLLETARKNW-- 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +K D F +STDEVYGSL + G F ED PY+P SPYS++KA+SD+LV A+ HTYG Sbjct: 125 --LNKPDTL-FHHVSTDEVYGSLGETGYFYEDTPYDPRSPYSSSKAASDHLVKAYHHTYG 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + +SNCSNNYGPY FPEKLIP+ + ++ + +YGDG+N+RDWLYV DH A++ + Sbjct: 182 MNITMSNCSNNYGPYQFPEKLIPVMVLNILAEKDLPVYGDGKNIRDWLYVIDHNTAIWNI 241 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRY 294 + KGRIGE YNIGG NE NI++V + + L P + +LI F++DRPGHDRRY Sbjct: 242 VTKGRIGETYNIGGENEWTNIELVNTLCEQMAELTGKPDINYYKKLITFVKDRPGHDRRY 301 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AI+ K+KSE+GW GL T+ WYL N+ W Sbjct: 302 AINCDKLKSELGWKQSVTFADGLKNTLRWYLKNSEW 337 >gi|21673147|ref|NP_661212.1| dTDP-D-glucose 4,6-dehydratase [Chlorobium tepidum TLS] gi|21646224|gb|AAM71554.1| dTDP-D-glucose 4,6-dehydratase [Chlorobium tepidum TLS] Length = 349 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 163/333 (48%), Positives = 220/333 (66%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R+ +N + +DKLTYAGNL +LK++ + + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRHFLNRYADYTITNLDKLTYAGNLANLKDVESNPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + KE + DA+++ AAESHVDRSI EF+ TN+ GT LL R W Sbjct: 61 ADGAFLLDLFKEQRFDAVIHLAAESHVDRSIESPVEFVITNVFGTVNLLNAARATWEGRF 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RF ISTDEVYGSL +G+FSE PY+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 121 EGK----RFYHISTDEVYGSLGSEGMFSESTPYDPHSPYSASKASSDHFVRAFHATYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG + FPEKLIPL I + + +YG G NVRDWL+V DH RA+ + Sbjct: 177 VVISNCSNNYGSHQFPEKLIPLFINNIRLEKPLPVYGQGLNVRDWLWVVDHARAIDEIFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G +GE YNIGG+NE NID++ + ++D + + +E LI ++ DR GHD RYAID Sbjct: 237 RGAVGETYNIGGHNEWTNIDLIRLLCRIMDRKLGREAGSSEKLITWVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SK++ E+GW P E GL KTV WYL+N W Sbjct: 297 ASKLQRELGWAPSVTFEEGLEKTVDWYLENQAW 329 >gi|75759810|ref|ZP_00739887.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492710|gb|EAO55849.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 325 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 218/336 (64%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF + +I Sbjct: 3 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQNHPNYSFAKGEI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 63 QNGELLEHIIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 116 --KYSHIKLVQVSTDEVYGSLGKIGKFTEKTPLAPNSPYSSSKASADLIALSYYKTYHLP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 174 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGGNNE+ N+++V +I LL + I ++ DR GHDRRYAID+ Sbjct: 234 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKT-------KKDIEYVTDRLGHDRRYAIDA 286 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY N WW+ L Sbjct: 287 EKMKNEFDWEPKYTFEQGLQETVKWYEKNKEWWKLL 322 >gi|78188494|ref|YP_378832.1| dTDP-glucose 4,6-dehydratase [Chlorobium chlorochromatii CaD3] gi|78170693|gb|ABB27789.1| dTDP-glucose 4,6-dehydratase [Chlorobium chlorochromatii CaD3] Length = 349 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/333 (47%), Positives = 219/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGGAGFIGS + R+ + + +DKLTYAGNL +L+++ Q + F++ DI Sbjct: 1 MHLLITGGAGFIGSHVVRHFLTRYPSYTITNLDKLTYAGNLENLRDVEQLPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I + D +++ AAESHVDRSI +F+ TN++GT LL + W Sbjct: 61 TDALFIMELFQANHFDGVIHLAAESHVDRSIANPTDFVITNVLGTVNLLNAAKASWQGAF 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RF ISTDEVYG+L + G+F+E PY+P SPYSA+KASSD+ V AW TYG+P Sbjct: 121 ESK----RFYHISTDEVYGTLGNDGIFTESTPYDPHSPYSASKASSDHFVRAWHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG + FPEKLIPL I +I+ + LYG G+N+RDWL+V DH A+ ++ Sbjct: 177 VVISNCSNNYGSFQFPEKLIPLFIHNIIQQKPLPLYGKGENIRDWLWVVDHAAAIDVIYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KG++GE YNIGG+NE N+ +V + ++D + + +E LI F+ DR GHD RYAID Sbjct: 237 KGKLGETYNIGGHNEWSNLALVRLLCTIMDKKLGRENGSSEKLITFVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+K++ E+GW P E GL +TV WYL N W Sbjct: 297 STKLQRELGWVPSITFEEGLERTVDWYLANGEW 329 >gi|327399835|ref|YP_004340704.1| dTDP-glucose 4,6-dehydratase [Hippea maritima DSM 10411] gi|327182464|gb|AEA34645.1| dTDP-glucose 4,6-dehydratase [Hippea maritima DSM 10411] Length = 359 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 223/341 (65%), Gaps = 17/341 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y + + ++ +D LTYAG+L +L+E+ + F++ +IC+ Sbjct: 15 ILITGGAGFIGSNFIPYFLEKYQEYNIINLDVLTYAGDLENLQEVENHPRYKFIKGNICN 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + KE+ +++FAAESHVD SI F+ TN+ GT+ L++ + +W Sbjct: 75 KELVEYIFKEYDIRGVIHFAAESHVDNSIKNPGVFVETNVNGTYTLIDVAKNYWMEAPFK 134 Query: 122 KKDQF---RFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KD++ RF ISTDEVYG+L LF+E+ PY P+SPYSA+KASSD +V ++ HTY Sbjct: 135 YKDEYKDSRFHHISTDEVYGTLPDDSNILFTEETPYAPNSPYSASKASSDMIVRSYHHTY 194 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I + G+ + +YGDG+N+RDWLYV DH + + L Sbjct: 195 GMNTVITNCSNNYGPKQHDEKLIPTIIRNALAGNPIPIYGDGKNIRDWLYVLDHCKGIDL 254 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----------YSHTELIRFIE 285 KG+ GE YNIGG NER NI I +I +LD L P S S+ +LI F+ Sbjct: 255 AYHKGKAGETYNIGGRNERTNIYIANKICEILDELYPISTNTQITNNQLTSYKDLITFVS 314 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 DRPGHDRRYAID+SKI++E+GW EN ESG+ KT+ WYL+ Sbjct: 315 DRPGHDRRYAIDASKIENELGWRADENFESGIVKTIKWYLE 355 >gi|332876948|ref|ZP_08444701.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685056|gb|EGJ57900.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 331 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/328 (47%), Positives = 224/328 (68%), Gaps = 8/328 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V + +DKLTYAGNL+++ +I+ + ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVTKYPDYHIFNLDKLTYAGNLDNIADIANAPNYTFIEADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E ++ K++ D +++ AAESHVDRSI F TN++GT LL+ R W Q Sbjct: 65 YERMKELFKKYHIDGVIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKDNMQG 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L D LF+E+ PY+P SPYSA+KASSD+ V A+ +TY +PV Sbjct: 125 K----RFYHVSTDEVYGALEMDNTLFTEETPYDPQSPYSASKASSDHFVRAYHNTYKLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG + +PEKLIP+ I +++ + +YG G+N+RDWL+VEDH RA+ ++ + Sbjct: 181 VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDVIFHQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGG NE +NID+V I +D + + +E LI F+ DR GHD RYAID+ Sbjct: 241 GKDGDTYNIGGFNEWRNIDLVRVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 +K+K+E+GW P E G+ KTV WYL+ Sbjct: 301 TKLKNELGWEPSLQFEEGIQKTVKWYLE 328 >gi|323693917|ref|ZP_08108104.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14673] gi|323502014|gb|EGB17889.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14673] Length = 340 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 169/337 (50%), Positives = 231/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN + Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPEYQIINLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I + +PD +VNFAAESHVDRSI + F+ TN+IGT LL+ R + Sbjct: 61 ADRKFIFELFENEKPDVVVNFAAESHVDRSITDPEAFVRTNVIGTTTLLDACREYGIQ-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V +S CSNNYGPYHFPEKLIPL I+R + + +YGDG NVRDWL+V DH A+ L Sbjct: 172 GLSVTVSRCSNNYGPYHFPEKLIPLMISRALADEELPVYGDGANVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR+GE YNIGG+NER N+++V I LD P+S LIR+++DRPGHD RYA Sbjct: 232 IIHKGRVGEVYNIGGHNERTNLEVVKTILKALDK--PES-----LIRYVKDRPGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++EIGW P+ N ++G+ +T+ WYL+N WW+ Sbjct: 285 IDPTKIETEIGWEPKYNFDTGIKQTIEWYLENQDWWK 321 >gi|256380335|ref|YP_003103995.1| dTDP-glucose 4,6-dehydratase [Actinosynnema mirum DSM 43827] gi|255924638|gb|ACU40149.1| dTDP-glucose 4,6-dehydratase [Actinosynnema mirum DSM 43827] Length = 330 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 162/339 (47%), Positives = 222/339 (65%), Gaps = 22/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R LV +V+V+DKLTYAGN +L ++ S F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRELVGGAYPAYADAEVVVLDKLTYAGNEANLAPVADSPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICDR+ + +K DA+V+FAAESHVDRSI G+ +F+ TN++GT +L+ Sbjct: 61 QGDICDRDLVAELVK--GADAVVHFAAESHVDRSISGSADFVLTNVLGTQTMLQAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+++G ++ED P+SPYSA+KASSD L A+ T+ Sbjct: 116 ------EAEVSRFVHVSTDEVYGSIEQGSWTEDHVLEPNSPYSASKASSDLLARAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEK+IPL +T +++G V LYGDG NVRDWL+V+DH R + L Sbjct: 170 GLPVCVTRCSNNYGPYQFPEKVIPLFVTNLVDGKKVPLYGDGLNVRDWLHVDDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL+ GR GE YNIGG E N ++ + LL+A + + + DR GHDRRY+ Sbjct: 230 VLEGGRGGEIYNIGGGTELTNRELTEK---LLEA---TGRDWDDSVEPVTDRKGHDRRYS 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI E+G+ P+ + GL TV WY DN WW PL Sbjct: 284 VDITKINQELGYSPKVDFAEGLASTVAWYRDNRDWWEPL 322 >gi|254458138|ref|ZP_05071564.1| dTDP-glucose 4,6-dehydratase [Campylobacterales bacterium GD 1] gi|207084974|gb|EDZ62260.1| dTDP-glucose 4,6-dehydratase [Campylobacterales bacterium GD 1] Length = 337 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 154/329 (46%), Positives = 223/329 (67%), Gaps = 5/329 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y + + ++ +D LTYAG+L +LKE + + F++ +IC+ Sbjct: 5 ILVTGCAGFIGSNFVPYFLEKYPEYNIVNLDLLTYAGDLENLKECENNTKYKFIKGNICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + E+ + +++FAAESHVD SI FI TN+ GTF LL+ + +W + Sbjct: 65 RELVEFIFNEYNINGVIHFAAESHVDNSIKNPGVFIETNVNGTFTLLDVAKNYWMSSPFN 124 Query: 122 KKDQF---RFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K+++ RF ISTDEVYG+L++ LF+E PY P+SPYSA+KASSD +V ++ T+G+ Sbjct: 125 YKEKYKNCRFHHISTDEVYGTLNETDLFTESTPYAPNSPYSASKASSDMIVRSYQETFGL 184 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +++NCSNNYGP EKLIP I + + G ++ +YGDG+N+RDWLYV DH + + LV Sbjct: 185 NTVITNCSNNYGPKQHDEKLIPTIIRKALVGENIPIYGDGKNIRDWLYVLDHCKGIDLVY 244 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G+ YN+GG NER N+ IV I +LD +PK+ S+ ELI F++DR GHDRRYAID Sbjct: 245 HTGKEANVYNVGGRNERTNLQIVDAICTILDEKVPKNSSYKELITFVKDRAGHDRRYAID 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++K+++E+GW EN ESG+ KTV WYL+ Sbjct: 305 ATKLENELGWIADENFESGIVKTVNWYLE 333 >gi|312868781|ref|ZP_07728972.1| dTDP-glucose 4,6-dehydratase [Lactobacillus oris PB013-T2-3] gi|311095680|gb|EFQ53933.1| dTDP-glucose 4,6-dehydratase [Lactobacillus oris PB013-T2-3] Length = 327 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 230/336 (68%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ L+ +D LTYAGN+++L ++ + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLEKHPDDNLINLDLLTYAGNIHNLDDVKDNPHYHFVKGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + + EF D IVNFAAESHVDRSIL + F+ TN+ GT LL+ + Sbjct: 61 VNRELVTHLVHEFNIDHIVNFAAESHVDRSILHPEVFVETNVQGTLALLDVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ +FLQ+STDEVYG+L G F+E+ P P+SPYSA+KAS+D +V A+ TYG+ Sbjct: 114 --REGVEKFLQVSTDEVYGTLGATGYFTEESPLQPNSPYSASKASADMMVRAYYETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL + +EG + +YG+G+N+RDWLYV DH +A+ LVL+ Sbjct: 172 VNITRCSNNYGPYQFPEKLIPLMTSNGMEGKDLPIYGNGKNIRDWLYVSDHCQAIDLVLR 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L S H I++++DR GHD+RYAID Sbjct: 232 DGKPGEIYNVGGHNERTNNEIVH---LIVDNL-GISEDH---IKYVKDRLGHDKRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI++E+GW P+ ++G+ KT+ WY DN WW+PL Sbjct: 285 TKIETELGWKPEYTFDTGIVKTIDWYKDNEDWWQPL 320 >gi|281420694|ref|ZP_06251693.1| dTDP-glucose 4,6-dehydratase [Prevotella copri DSM 18205] gi|281405467|gb|EFB36147.1| dTDP-glucose 4,6-dehydratase [Prevotella copri DSM 18205] Length = 377 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 164/355 (46%), Positives = 224/355 (63%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 4 IIITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIEDKPNYTFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +++++ D I++ AAESHVDRSI F TN++GT LL+ +++W L + Sbjct: 64 FDLMLKLMQDYKVDGIIHLAAESHVDRSIKDPFTFAQTNVMGTLSLLQAAKIYWESLPEG 123 Query: 122 KKDQFRFLQISTDEVYGSL------------------DKG-------LFSEDMPYNPSSP 156 + + RF ISTDEVYG+L DK F E YNP SP Sbjct: 124 YEGK-RFYHISTDEVYGALQMTHPEGIPAPFTTKASSDKNHEAYGEEFFLETTKYNPHSP 182 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 183 YSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 242 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSY 275 G+NVRDWLYV DH RA+ ++ KG+I E YNIGG NE KNIDI+ + +D L+ K Sbjct: 243 GENVRDWLYVVDHARAIDMIFHKGKIAETYNIGGFNEWKNIDIIKVVIKTVDRLLGRKEG 302 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS K++ E+GW P E G+ +TV WYL+N W Sbjct: 303 EDMDLITYVTDRKGHDMRYAIDSRKLQKELGWEPSLQFEEGIEETVKWYLENQEW 357 >gi|332184526|gb|AEE26780.1| dTDP-glucose 4,6-dehydratase [Francisella cf. novicida 3523] Length = 333 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 158/326 (48%), Positives = 218/326 (66%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK ++ + F++ DICD Sbjct: 8 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKNLNNEHNHIFIKGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE + D IV+FAAESHVD SI F+ TN+IGTF LL+ + +WS Sbjct: 68 EILVYQTLKEHKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWSDELGL 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L D F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 128 DKTSCRFHHVSTDEVYGTLAKDDPAFTESKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 188 TISNCSNNYGPYQHREKLIPVVINSCINQKPIPVYGDGSNIRDWLYVEDHCDAIQTIIEK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H++LI F+EDR GHD RYAID+ Sbjct: 248 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSKLITFVEDRKGHDWRYAIDNG 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + KT+ +YL Sbjct: 308 KIQNELGWKPSQDFDKMFRKTIEFYL 333 >gi|33591368|ref|NP_879012.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis Tohama I] gi|33571010|emb|CAE40489.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis Tohama I] gi|332380769|gb|AEE65616.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis CS] Length = 353 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 214/336 (63%), Gaps = 8/336 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +D LTYAGN +L + + DI Sbjct: 1 MSILVTGGAGFIGSNFVLGWLASGDEPVINLDLLTYAGNAANLAALRDDPRHLLVHGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L+E +P AIVNFAAESHVDR+I D F+ TN++GTF LLE R + C Q Sbjct: 61 DAPLVRRLLREHRPRAIVNFAAESHVDRAIRAPDAFVQTNVVGTFTLLEAARAY--CTEQ 118 Query: 121 DKKDQ--FRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D FRFL +STDEVYGSL F+E PY P++PYSA+KA+SD++V ++ HTYG Sbjct: 119 DAAAAAAFRFLHVSTDEVYGSLAPQAAPFTETHPYQPNNPYSASKAASDHMVRSYRHTYG 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + ++C NNYGP FPEKLIPL I + G + LYGDG +VRDWLYV DH AL V Sbjct: 179 LPAITTHCCNNYGPRQFPEKLIPLVIHHALAGRALPLYGDGMHVRDWLYVVDHCAALECV 238 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA--LIPKSYSHTELIRFIEDRPGHDRRY 294 L+ G+ G+ YNIG + ER N+++V + LLD P H I FI +RPGHDRRY Sbjct: 239 LRDGQPGQTYNIGAHCERTNLEVVHAVCALLDQWRARPDGQPHAGGIAFIPERPGHDRRY 298 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AID+ KI+ E+GW + E+GL +TV WYLD+ W Sbjct: 299 AIDAGKIQRELGWRAATSFEAGLRETVRWYLDHPQW 334 >gi|304407808|ref|ZP_07389459.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] gi|304343291|gb|EFM09134.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] Length = 340 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 160/332 (48%), Positives = 222/332 (66%), Gaps = 19/332 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y++ + ++ +D LTYAGNL +L+ + + + F++ DI Sbjct: 1 MKILVTGGAGFIGSNFVLYMLGKYADVTIVNVDALTYAGNLENLRSVENNANYRFVKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + E D + NFAAESHVDRSIL D F+ TNI+GT LL+ + + Sbjct: 61 ADRAALEPLFAE-GIDVVANFAAESHVDRSILHPDIFVRTNILGTQTLLDLAKQYGVS-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+Q+STDEVYG+L + GLF+E+ P P+SPYSA+KA +D LV A+ T+G+ Sbjct: 118 -------KFVQVSTDEVYGTLGETGLFTEETPLAPNSPYSASKAGADLLVRAYHETFGLS 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I ++ + +YGDG NVRDWLYVEDH A+ LV++ Sbjct: 171 VNITRCSNNYGPYQFPEKLIPLMIQNALDDKPLPVYGDGLNVRDWLYVEDHCSAIDLVIR 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YN+GG NER N+ +V I L + P+S LI +++DR GHDRRYAID+ Sbjct: 231 GGRNGEVYNVGGRNERTNVQVVGTI--LAELGKPES-----LITYVKDRLGHDRRYAIDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI++E+GW P+ + ESG+ +T+ WYL N W Sbjct: 284 DKIRNELGWSPKHDYESGIRETIRWYLSNRDW 315 >gi|301311241|ref|ZP_07217169.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] gi|300830815|gb|EFK61457.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] Length = 379 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 221/355 (62%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN ++ +DKLTYAGNL +LK++ + F+++DICD Sbjct: 6 IVITGGAGFIGSHVVRLFVNKYPGYNIINLDKLTYAGNLANLKDVEDKPNYKFVRMDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ Q D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 66 FEAFYQLMRDEQIDGIIHLAAESHVDRSIKDPFTFARTNVMGTLALLQAAKLYWESLPE- 124 Query: 122 KKDQFRFLQISTDEVYGSLDKG-------------------------LFSEDMPYNPSSP 156 K + RF ISTDEVYG+L F E YNP SP Sbjct: 125 KYEGKRFYHISTDEVYGALTMNHPEGIEPPFMTAASSGEHHLAYGDDFFYETTKYNPHSP 184 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 185 YSASKASSDHFVRAYHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGK 244 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSY 275 G+NVRDWL+VEDH RA+ L+ G+I E YNIGG NE KNIDI+ + +D+L+ K Sbjct: 245 GENVRDWLFVEDHARAIDLIFHNGKIAETYNIGGFNEWKNIDIIKVVINTVDSLLGRKEG 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS+K++ E+GW P E G+ +TV WYL+ + W Sbjct: 305 EDMDLITYVTDRLGHDVRYAIDSTKLQKELGWEPSLQFEEGIERTVRWYLEKHEW 359 >gi|283795743|ref|ZP_06344896.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] gi|291076681|gb|EFE14045.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] Length = 357 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 225/332 (67%), Gaps = 3/332 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++TG AGFIGS Y++ + +LV +DKLTYAG+L +LK + F+Q DIC Sbjct: 3 KYLITGCAGFIGSNFVYYMLKKYQDILLVNLDKLTYAGSLENLKGVEGDPRHVFVQGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLS 119 D++ + S +++ D ++NFAAESHVDRSI + F+ TN++GT LL+ + W++ + Sbjct: 63 DKDLVASLFEKYDFDYVINFAAESHVDRSIANPEIFVQTNVMGTINLLQRAKEAWYNPET 122 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K+ ++LQ+STDEVYG+L +G F+E P +P SPYS++KAS+D+ V A+ TYG+P Sbjct: 123 KAWKEGKKYLQVSTDEVYGALGTEGYFTETTPLSPHSPYSSSKASADHFVQAFHDTYGMP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ +V Sbjct: 183 VNITRCSNNYGPYQFPEKLIPLMINNVKHHKQLSVYGDGMQIRDWLYVEDHCKAIDMVAN 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+IGE YN+GG+NER NI IV I L + +LI+ +EDR GHDRRY ID Sbjct: 243 DGKIGEVYNVGGHNERPNIFIVKTIIQQLHDRLKDEGISEDLIKHVEDRLGHDRRYGIDP 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KIK+++GW+P+ E G+ T+ WYL++ W Sbjct: 303 TKIKNDLGWYPETPFEKGIVLTIDWYLEHEDW 334 >gi|219852975|ref|YP_002467407.1| dTDP-glucose 4,6-dehydratase [Methanosphaerula palustris E1-9c] gi|219547234|gb|ACL17684.1| dTDP-glucose 4,6-dehydratase [Methanosphaerula palustris E1-9c] Length = 323 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 218/335 (65%), Gaps = 18/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGG+GFIGS RY++ + + ++ +DKLTYAGN SLK++ ++F+ DI Sbjct: 1 MRLLVTGGSGFIGSNFVRYMLKEHPDLDLVNLDKLTYAGNPASLKDLEDDPQYTFVYGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + A+ E + D +V+FAAESHVDRSI A F+ TN++GT +LE R Sbjct: 61 CDPQVVEKAMSEHECDTVVHFAAESHVDRSIHDASAFVKTNLLGTATMLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF+ ISTDEVYGS +G F E PSSPYS++KA SD L A+ TYG+ V Sbjct: 114 --KNGITRFIHISTDEVYGSTLEGAFVETDRLEPSSPYSSSKAGSDLLAKAYATTYGLNV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL +T ++EG V +YG G+NVR+W+YV DH RA+ VL Sbjct: 172 SITRCSNNYGPYQFPEKLIPLFVTNLLEGGKVPIYGTGKNVREWIYVLDHCRAIDFVLTH 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E+ N+ I +I AL+ K S I +++DRPGHD RYAI+ + Sbjct: 232 GAKGEIYNIGSGVEKTNLAITDQI----LALLGKDQSS---IEYVQDRPGHDFRYAINCT 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++ +GW P + E L T+ WY +N WWW+PL Sbjct: 285 KLET-MGWKPAYSFEEALTATINWYRENPWWWKPL 318 >gi|295102418|emb|CBK99963.1| dTDP-glucose 4,6-dehydratase [Faecalibacterium prausnitzii L2-6] Length = 354 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 220/332 (66%), Gaps = 3/332 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++TG AGFIGS Y++ +LV +DKLTYAGNL +LK+I F+Q DIC Sbjct: 3 KYLITGCAGFIGSNFVHYMLKKYPEILLVNLDKLTYAGNLENLKDIEGDPRHVFVQGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLS 119 D+E + S ++ D ++NFAAESHVDRSI + F+ +N++GT LL+ + W+ + Sbjct: 63 DKELVESLFAKYDFDYVINFAAESHVDRSIKNPEIFVQSNVMGTVNLLQRAKEAWYDAEA 122 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K+ ++LQ+STDEVYG+L +G F E P P SPYS++KAS+D V+A+ TYG+P Sbjct: 123 KTWKEGKKYLQVSTDEVYGALGAEGFFMETTPLCPHSPYSSSKASADMFVMAFHDTYGMP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ +V Sbjct: 183 INITRCSNNYGPYQFPEKLIPLMINNVKHHKQLPVYGDGMQIRDWLYVEDHCKAIDMVCN 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G++GE YN+GG+NER NI IV I L + +LI+ + DR GHDRRY ID Sbjct: 243 GGKVGEVYNVGGHNERPNIFIVKTIIEQLHDRLKDDGISEDLIKHVADRLGHDRRYGIDP 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KIK+++GW+P+ E G+ T+ WYLD+ W Sbjct: 303 TKIKNDLGWYPETPFEKGIVLTIDWYLDHEEW 334 >gi|227538988|ref|ZP_03969037.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] gi|227241191|gb|EEI91206.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] Length = 349 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/331 (47%), Positives = 221/331 (66%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R V LV +D LTYAGNL +LK+I + F++ DI D Sbjct: 5 IIITGGAGFIGSHVVREFVTKYPEYHLVNLDGLTYAGNLENLKDIQDKPNYQFIKADITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I ++++PD +++ AAESHVDRSI F+ TN+IGT LL + W +D Sbjct: 65 AALILDIFRQYKPDGVIHLAAESHVDRSITDPTAFVMTNVIGTVNLLNAAKEIW----RD 120 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF ISTDEV+G+L GLF+E+ Y+P SPYSA+KASSD+ V A+ TYG+P++ Sbjct: 121 NFEGKRFHHISTDEVFGALGATGLFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLPIV 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGP HFPEKLIPL I ++ + +YGDG+ RDWL+V DH +A+ LV +G Sbjct: 181 LTNCSNNYGPNHFPEKLIPLCIHNILNNKPLPIYGDGKYTRDWLFVIDHAKAIDLVYHRG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDSS 299 + GE YN+GG NE +NID+V E+ +D + + + +LI +++DRPGHD RYAID++ Sbjct: 241 KNGESYNVGGFNEWQNIDLVKELCKQMDEKLGRPVGTADQLITYVKDRPGHDLRYAIDAA 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+G+ P E GL+ T+ W+L+N W Sbjct: 301 KINQELGYQPSVTFEEGLSVTIDWFLNNQEW 331 >gi|160940128|ref|ZP_02087473.1| hypothetical protein CLOBOL_05017 [Clostridium bolteae ATCC BAA-613] gi|158436708|gb|EDP14475.1| hypothetical protein CLOBOL_05017 [Clostridium bolteae ATCC BAA-613] Length = 340 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 169/337 (50%), Positives = 231/337 (68%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS ++VN +++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGSNFVHHMVNKYPDYEIINLDLLTYAGNLENLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I ++ +PD +VNFAAESHVDRSI + F+ TN++GT LL+ R + Sbjct: 61 ADRKFIFELFEKEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH +A+ L Sbjct: 172 GLPVTVSRCSNNYGPYHFPEKLIPLIISRALADEELPVYGTGENVRDWLHVADHCQAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ KGR GE YNIGG+NER N+++V I LD P+S LI+F+ DRPGHD RYA Sbjct: 232 VIHKGREGEVYNIGGHNERTNLEVVKTILKALDK--PES-----LIKFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKIETELGWKPTYNFDTGIEQTIRWYLDNQDWWK 321 >gi|150010193|ref|YP_001304936.1| dTDP-glucose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] gi|149938617|gb|ABR45314.1| dTDP-glucose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] Length = 380 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 161/355 (45%), Positives = 224/355 (63%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I ++F++ DICD Sbjct: 7 ILITGGAGFIGSHVVRLFVNKYIDCHIINLDKLTYAGNLANLKDIENRQNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ + +++ D +++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 67 FIKIQELMVQYEVDGVIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKLYWESLPEK 126 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------------KGLFSEDMPYNPSSP 156 + + F ISTDEVYG+L K F E+ YNP SP Sbjct: 127 YEGKM-FYHISTDEVYGALTMSHPEGIEPPFITTASSGGHHHAYGKDFFYENTKYNPHSP 185 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KASSD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 186 YSASKASSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGR 245 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G+NVRDWL+VEDH RA+ L+ +G++ + YNIGG NE KNIDI+ I +D L+ + Sbjct: 246 GENVRDWLFVEDHARAIDLIFHQGKVADTYNIGGFNEWKNIDIIKVIIRTVDRLLGRREG 305 Query: 277 H-TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +LI ++ DR GHD RYAIDS+K++ E+GW P E G+ KTV WYL+N W Sbjct: 306 EDMDLITYVTDRLGHDARYAIDSTKLQKELGWEPLYQFEEGIEKTVKWYLENQEW 360 >gi|257440890|ref|ZP_05616645.1| dTDP-glucose 4,6-dehydratase [Faecalibacterium prausnitzii A2-165] gi|257196670|gb|EEU94954.1| dTDP-glucose 4,6-dehydratase [Faecalibacterium prausnitzii A2-165] Length = 354 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 220/332 (66%), Gaps = 3/332 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++TG AGFIGS Y++ +LV +DKLTYAGNL +LK++ F+Q DIC Sbjct: 3 KYLITGCAGFIGSNFVHYMLKKYPEILLVNLDKLTYAGNLENLKDVEGDPRHVFVQGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLS 119 D+E + S ++ D ++NFAAESHVDRSI + F+ +N++GT LL+ + W+ + Sbjct: 63 DKELVESLFAKYDFDYVINFAAESHVDRSIKNPEIFVQSNVMGTVNLLQRAKEAWYDADA 122 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K+ ++LQ+STDEVYG+L +G F E P P SPYS++KAS+D V+A+ TYG+P Sbjct: 123 KTWKEGKKYLQVSTDEVYGALGAEGYFMETTPLCPHSPYSSSKASADMFVMAFHDTYGMP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ +V Sbjct: 183 INITRCSNNYGPYQFPEKLIPLMINNVKHHKQLPVYGDGMQIRDWLYVEDHCKAIDMVCN 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+IGE YN+GG+NER NI IV I L + +LI+ + DR GHDRRY ID Sbjct: 243 GGKIGEVYNVGGHNERPNIFIVKTIIAQLHDRLKDDGISEDLIKHVADRLGHDRRYGIDP 302 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +KIK+++GW+P+ E G+ T+ WYLD+ W Sbjct: 303 TKIKNDLGWYPETPFEKGIVLTIDWYLDHEEW 334 >gi|323489096|ref|ZP_08094330.1| dTDP-4-dehydrorhamnose reductase [Planococcus donghaensis MPA1U2] gi|323397219|gb|EGA90031.1| dTDP-4-dehydrorhamnose reductase [Planococcus donghaensis MPA1U2] Length = 338 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 224/336 (66%), Gaps = 21/336 (6%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG +Y+ N K + +D LTYAG+L + I ++ +SF+ +DI D Sbjct: 4 ILVTGGAGFIGGNFVQYMAANYPKYHIYNLDLLTYAGDLTKHQAIENNDNYSFVHIDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I + ++ IV+FAAESHVDRSI + FI TN++GT +LLE + Sbjct: 64 RQAIDALFEKIDFTYIVHFAAESHVDRSIAEPEIFIRTNVLGTQVLLEAAK--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + +F+ +STDEVYG L+ F+E+ P PSSPYSA+KASSD LV A+ TYG+P Sbjct: 115 RANIKKFVHVSTDEVYGELEFDPTTFFTEETPLQPSSPYSASKASSDLLVRAYYETYGLP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPYHFPEKLIPL I+R++ V +YGDG+NVRDWL+V+DH A+ LV+ Sbjct: 175 INITRCSNNYGPYHFPEKLIPLTISRLLNDQKVPVYGDGKNVRDWLHVQDHCSAIDLVMH 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G IGE YNIGG+NE+KN+++V +I +LI F+EDR GHD+RYAID Sbjct: 235 SGEIGEVYNIGGHNEQKNLEVV-------KTIIRTLGKSEDLIEFVEDRLGHDKRYAIDP 287 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI+ +GW P + ++G+ +TV W+L+N WW + Sbjct: 288 TKIE-RLGWRPVYDFDTGIAQTVEWFLENKAWWEQI 322 >gi|56708491|ref|YP_170387.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670962|ref|YP_667519.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis FSC198] gi|254371117|ref|ZP_04987119.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis FSC033] gi|254875339|ref|ZP_05248049.1| wbtM, dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis MA00-2987] gi|45434716|gb|AAS60278.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis] gi|56604983|emb|CAG46083.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321295|emb|CAL09466.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis FSC198] gi|151569357|gb|EDN35011.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis FSC033] gi|254841338|gb|EET19774.1| wbtM, dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis MA00-2987] Length = 348 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 156/326 (47%), Positives = 222/326 (68%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 23 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 83 EVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 142 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF +STDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 143 EETSCRFHHVSTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHISRAYHHTYKLPV 202 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 203 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVEK 262 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 263 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 322 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 323 KIQNELGWKPSQDFDKMFRQTIEFYL 348 >gi|288800050|ref|ZP_06405509.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 299 str. F0039] gi|288333298|gb|EFC71777.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 299 str. F0039] Length = 382 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 168/358 (46%), Positives = 227/358 (63%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+N + I+VL++D LTYAGNL ++KE + F++ +I Sbjct: 5 LVTGAAGFIGANFIKYLLNKKYQNQDIKVLILDDLTYAGNLGTIKEDIDNKRCFFIKGNI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E ++ E D IVNFAAESHVDRSI F+ TNI+GT LL+ R W+ Sbjct: 65 VDKELVQKIFDEHDIDYIVNFAAESHVDRSIENPQLFLETNILGTQNLLDAARKNWTLGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + KD R+ Q+STDEVYGSL G F+E+ P P SPYSA+KAS+D++V+A+ Sbjct: 125 GNDGYPIWKDGKRYHQVSTDEVYGSLGSDGFFTEETPLCPHSPYSASKASADFIVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY P ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G+NVRDWLYVEDH +A+ Sbjct: 185 TYHTPCSITRCSNNYGPYHFPEKLIPLIIKNILEGKALPVYGKGENVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPKSYSHT----- 278 LV+++G+ G YN+GG+NE NIDIV E L ++ K T Sbjct: 245 DLVVREGKSGSIYNVGGHNEMTNIDIVKLTIQTIRTMMEENKELRKVLKKQELDTTGEIS 304 Query: 279 ------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI+F+EDR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L+N W Sbjct: 305 IDWINESLIKFVEDRLGHDLRYAIDPTKIKNELGWYPETMFAEGIVKTIKWNLENQAW 362 >gi|332678710|gb|AEE87839.1| dTDP-glucose 4,6-dehydratase [Francisella cf. novicida Fx1] Length = 339 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 156/326 (47%), Positives = 222/326 (68%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 14 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE + D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 74 EVLVYQTLKEHKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 133 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF +STDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 134 EETSCRFHHVSTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 193 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A++ +++K Sbjct: 194 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIHTIVEK 253 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 254 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 313 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 314 KIQNELGWKPSQDFDKMFRQTIEFYL 339 >gi|254373344|ref|ZP_04988832.1| hypothetical protein FTCG_00931 [Francisella tularensis subsp. novicida GA99-3549] gi|151571070|gb|EDN36724.1| hypothetical protein FTCG_00931 [Francisella novicida GA99-3549] Length = 339 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 156/326 (47%), Positives = 221/326 (67%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 14 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE + D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 74 EILVYQTLKEHKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 133 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF +STDEVYG+L D F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 134 EETSCRFHHVSTDEVYGTLTKDDPAFTETKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 193 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 194 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVEK 253 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H++LI F+EDR GHD RYAID+S Sbjct: 254 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSKLITFVEDRKGHDWRYAIDNS 313 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 314 KIQNELGWKPSQDFDKMFRQTIEFYL 339 >gi|315224468|ref|ZP_07866295.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea F0287] gi|314945489|gb|EFS97511.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea F0287] Length = 330 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 157/329 (47%), Positives = 221/329 (67%), Gaps = 8/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN ++ DKLTYAGNL ++ +++ + ++F+Q DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPDYHIINSDKLTYAGNLENVADVANAPNYTFIQADICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ E D I++ AAESHVDRSI F TN++GT LL+ R W Q Sbjct: 65 YERMKALFAEHHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKDNMQG 124 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG+L D LF+E PY+P SPYSA+KASSD+ V A+ +TY +P+ Sbjct: 125 K----RFYHVSTDEVYGALEMDNTLFTEQTPYDPQSPYSASKASSDHFVRAYHNTYKLPM 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG + +PEKLIP+ I +++ + +YG G+N+RDWL+VEDH RA+ + + Sbjct: 181 VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDTIFHQ 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGG NE +NID+V I +D + + +E LI F+ DR GHD RYAID+ Sbjct: 241 GKDGDTYNIGGFNEWRNIDLVKVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +K+K+E+GW P E G+ KTV WYL N Sbjct: 301 TKLKNELGWEPSLQFEEGIRKTVKWYLAN 329 >gi|269121008|ref|YP_003309185.1| dTDP-glucose 4,6-dehydratase [Sebaldella termitidis ATCC 33386] gi|268614886|gb|ACZ09254.1| dTDP-glucose 4,6-dehydratase [Sebaldella termitidis ATCC 33386] Length = 398 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 167/375 (44%), Positives = 231/375 (61%), Gaps = 49/375 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIGS +Y++ K I+V+V+D+LTYAGNL ++KE Q +F + +I D Sbjct: 5 LITGAAGFIGSNYLKYVLRLYKNIKVIVLDELTYAGNLGTIKENIQDKRVNFEKGNIKDP 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ + ++ D IVNFAAESHVDRSI F+ TNI+GT L+E + W +DK Sbjct: 65 VLVKELISKYNIDYIVNFAAESHVDRSIENPQIFLETNILGTQNLMECAKAAWRT-GEDK 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKGL-----------------------------FSE 147 K+ +FLQISTDEVYGSL K F+E Sbjct: 124 NGYPIYKEGVKFLQISTDEVYGSLAKDFEEPQNLEIPSEIAGKIASDRKLQTYGKEFFTE 183 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 +P SPYSA+KA +D++VLA+ TY +PV ++ CSNNYGP+HFPEKLIPL I ++E Sbjct: 184 KTSLDPRSPYSASKAGADFIVLAYAETYKMPVNITRCSNNYGPFHFPEKLIPLMIKNVLE 243 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YGDG+NVRDWLYVEDH +A+ +VL+ G+ GE YN+GG NE +NI IV + ++ Sbjct: 244 GKALPVYGDGKNVRDWLYVEDHCKAIDIVLRNGKAGEIYNVGGFNEEQNIRIVKLVIDII 303 Query: 268 DALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 L K+ + LI +++DR GHDRRYAID +KI +E+GW+P+ E Sbjct: 304 KELTGKNAEYKNILKTKWENINYNLITYVQDRLGHDRRYAIDPTKIVNELGWYPETKFED 363 Query: 316 GLNKTVCWYLDNNWW 330 G+ KT+ WYLDN W Sbjct: 364 GIRKTIIWYLDNQKW 378 >gi|330967440|gb|EGH67700.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 299 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 149/277 (53%), Positives = 191/277 (68%), Gaps = 15/277 (5%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L K FRF Sbjct: 1 FAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATDKAAFRF 60 Query: 129 LQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 L +STDEVYG+L + F+E PY P+SPYSA+KA+SD+LV ++ HTYG+PVL +NCSN Sbjct: 61 LHVSTDEVYGTLGANDPAFTETTPYMPNSPYSASKAASDHLVRSYHHTYGMPVLTTNCSN 120 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 NYGP+HFPEKLIPL I + G + +YGDGQ +RDWLYVEDH + VL+ G +G Y Sbjct: 121 NYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAGALGATY 180 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSY-------------SHTELIRFIEDRPGHDRR 293 NIGG NE+ NIDIV + LLD L P + ++ ELI ++ DRPGHDRR Sbjct: 181 NIGGWNEKANIDIVHTLCALLDELAPAAARQVINQKTGEPVSNYAELITYVTDRPGHDRR 240 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAID+ KI+ E+GW P E ++G+ KTV WYL N W Sbjct: 241 YAIDARKIERELGWKPAETFDTGIRKTVEWYLTNQKW 277 >gi|238560598|gb|ACR46364.1| TDP-D-glucose-4,6-dehydratase [Streptomyces peucetius ATCC 27952] Length = 328 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 220/337 (65%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 +++VTGGAGFIGS R ++ I V V+DKLTYAGN +L E+ + FSF+Q Sbjct: 3 TKILVTGGAGFIGSHYVRTVLGPEGPDDIAVTVLDKLTYAGNPANLDEVREHPGFSFVQG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + E D +V+FAAESHVDRSI G EF+ TN++GT L++ Sbjct: 63 DICDTELVGKLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVVGTHTLID-------- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ Sbjct: 113 -AAHRAGVKTFVHISTDEVYGSIDEGSWPETHPLEPNSPYSSAKASSDLIALSYHRTHGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYG +HFPEK+IPL IT +++G V LYGDG NVRDWL+++DHV+ + LV Sbjct: 172 DVRVTRCSNNYGHHHFPEKVIPLFITNLLDGKKVPLYGDGGNVRDWLHIDDHVQGIELVR 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LL+A + E ++ DR GHDRRY++D Sbjct: 232 TKGRAGEVYNIGGGTELSNKELT---GLLLEACGADWDTSVE---YVTDRKGHDRRYSVD 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKI+ E+G+ P+++ GL +TV WY DN WW PL Sbjct: 286 CSKIREELGYEPRKDFAKGLAETVQWYRDNRAWWEPL 322 >gi|289434340|ref|YP_003464212.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170584|emb|CBH27124.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 328 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 231/341 (67%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I + F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKNNANHVFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + +++ + E + DAIVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKNIVLEHKIDAIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVTKYLQVSTDEVYGSLGEIGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP HFPEKLIPL IT ++G + +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPNHFPEKLIPLMITNGLDGEQLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YN+GG+NER N +IV ++D L + I ++EDR GHD RYAID Sbjct: 232 KGKSGEVYNVGGHNERTNNEIVH---IIVDDLKLSE----DKIVYVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWKPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|254368836|ref|ZP_04984849.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica FSC022] gi|157121757|gb|EDO65927.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica FSC022] Length = 348 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 157/326 (48%), Positives = 221/326 (67%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + F++ DICD Sbjct: 23 ILVTGAAGFIGSNYVRIMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHIFIKGDICD 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 83 EVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLYELGL 142 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF ISTDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 143 EETSCRFHHISTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 202 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 203 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVEK 262 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 263 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 322 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 323 KIQNELGWKPSQDFDKMFRQTIEFYL 348 >gi|147678913|ref|YP_001213128.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] gi|146275010|dbj|BAF60759.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] Length = 338 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 170/342 (49%), Positives = 223/342 (65%), Gaps = 23/342 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R +VTGGAGFIGS YL+ + +++ +DKLTYAG L +L I S + F + DI Sbjct: 4 RYLVTGGAGFIGSNFIIYLLTKYENCIVINLDKLTYAGCLENLAAIKDSPRYQFYKGDIA 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + L D IVNFAAESHVDRSI F+ TN++GT +LL+ Sbjct: 64 DKELVGKILAG-GIDVIVNFAAESHVDRSIHDPGIFVKTNVLGTQVLLDGAL-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +F+QISTDEVYGSL G F EDMP P+SPYSA+KA++D LV A+ HT+G+ V Sbjct: 115 -KFGIKKFVQISTDEVYGSLGASGYFREDMPLCPNSPYSASKAAADLLVHAYRHTFGLNV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL IT +E + +YGDG NVRDWL+V+DH A+ V++ Sbjct: 174 NITRCSNNYGPYQFPEKLIPLMITNALEDLPLPVYGDGLNVRDWLHVKDHCAAIDCVIEN 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGGNNE+ N++IV I +L + LI+F++DRPGHDRRYAID+ Sbjct: 234 GRPGEVYNIGGNNEKTNLEIVKTILRILG-------KNENLIKFVKDRPGHDRRYAIDAG 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKE 337 KI E+GW P+ + E G+ T+ WY+ N WW+ + YKE Sbjct: 287 KIMKELGWMPEYSFEQGIQSTIEWYIKNEAWWKRIKSGEYKE 328 >gi|134301507|ref|YP_001121475.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049284|gb|ABO46355.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis WY96-3418] Length = 333 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 222/326 (68%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 8 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +KE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 68 EVLVYQTMKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF +STDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 128 EETSCRFHHVSTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 188 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVEK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 248 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 308 KIQNELGWKPSQDFDKMFRQTIEFYL 333 >gi|282851767|ref|ZP_06261130.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri 224-1] gi|311110584|ref|ZP_07711981.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri MV-22] gi|19550669|gb|AAL91481.1|AF479753_2 putative dTDP-glucose 4,6-dehydratase RmlB [Lactobacillus gasseri] gi|282557009|gb|EFB62608.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri 224-1] gi|311065738|gb|EFQ46078.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri MV-22] Length = 345 Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 176/337 (52%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +D LTYAGNL++LK++ + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFIFYMLKKHPDYEIICLDSLTYAGNLSTLKDVMDNPNFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 RDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G T+ Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 HLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGKNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 232 ILEKGTPGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPEKIHNELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|291561387|emb|CBL40186.1| dTDP-glucose 4,6-dehydratase [butyrate-producing bacterium SS3/4] Length = 345 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 233/337 (69%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN + Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFIHHMVNKYPEYQIVNLDLLTYAGNLETLKPVENKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + ++ +PD +VNFAAESHVDRS++ + F+ TN++GT LL+ R + Sbjct: 61 ADRKFVFDLFEKEKPDIVVNFAAESHVDRSVVDPESFVRTNVMGTTTLLDACRTYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEALPVYGTGENVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ GR+GE YN+GG+NER N+++V I L+ P+S LI+F+ DRPGHDRRYA Sbjct: 232 IIHNGRVGEVYNVGGHNERTNLEVVKTILKALNK--PES-----LIKFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKLETELGWKPKYNFDTGIQQTIQWYLDNEDWWK 321 >gi|296329242|ref|ZP_06871743.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153598|gb|EFG94415.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 400 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 165/379 (43%), Positives = 235/379 (62%), Gaps = 56/379 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ K I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 6 LVTGAAGFIGANFLKYILKKHKDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 66 KEIERVFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWT-VSKDE 124 Query: 123 ------KDQFRFLQISTDEVYGSLDK------------------------------GLFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 125 NGYPIYREDIKYLQVSTDEVYGSLSKDYDEPIELVIDDEDVKKVVKNRKNLKTYGNNFFT 184 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 185 EESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 244 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + GE YNIGG NE KNI+IV + Sbjct: 245 EGKKLPVYGKGGNVRDWLYVEDHCKGIDLVLREAKSGEIYNIGGFNEEKNINIV---KLV 301 Query: 267 LDALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 +D L + ++ E LI +++DR GHD RYAI+ S+I ++GW+P+ Sbjct: 302 IDVLKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSRIAKDLGWYPET 361 Query: 312 NMESGLNKTVCWYLDNNWW 330 + E+G+ KTV WYL+N W Sbjct: 362 DFETGIRKTVKWYLENQDW 380 >gi|309389681|gb|ADO77561.1| dTDP-glucose 4,6-dehydratase [Halanaerobium praevalens DSM 2228] Length = 319 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 224/335 (66%), Gaps = 18/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++ GGAGFIGS Y + Q++ IDKLTYAGNL +LK++S + + F ++DIC Sbjct: 1 MKILIAGGAGFIGSNFIHYQLKHYADQIINIDKLTYAGNLENLKDVSHKSNYQFYKIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ IR + + + D +VNFAAESHVDRSI FI N++GT LL+ L Sbjct: 61 NKNAIRKIM-DSKIDLVVNFAAESHVDRSIADPAVFIQNNVLGTQNLLD------LALEF 113 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K +F+QISTDEVYGSL + F+E P NPS+PY+A+KA++D LV ++ TY +P+ Sbjct: 114 EVK---KFIQISTDEVYGSLKSQNKFTELSPLNPSNPYAASKAAADLLVKSYFKTYKLPI 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNN+GPY +PEKLIPL I + ++ + LYGDG N+RDW++V DH RA+ LV++K Sbjct: 171 NITRCSNNFGPYQYPEKLIPLFIIKALKKEQLPLYGDGTNIRDWIFVRDHCRAIDLVMRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YNIG NNE+ N++I +I LL LI++++DR GHD RYAIDS+ Sbjct: 231 GKTGEIYNIGANNEKSNLEITKKILSLLS-------KSENLIKYVKDRQGHDYRYAIDST 283 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KIK E+ W + E + KTV WYL+N WW+ + Sbjct: 284 KIKKELDWQVNSSFEKDIIKTVNWYLENKKWWQKI 318 >gi|170785376|gb|ACB37735.1| dTDP-glucose 4,6-dehydratase [Micromonospora chalcea] Length = 332 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 160/340 (47%), Positives = 221/340 (65%), Gaps = 23/340 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 R++VTGGAGFIGS R L+ V+V+DKLTYAGNL++L +S F + Sbjct: 6 RVVVTGGAGFIGSHYVRQLIGGAYPAFADASVVVLDKLTYAGNLDNLAAVSGDERFELVV 65 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD + + L D +V+FAAESHVDRSI+GA +F+ TN+ GT+ +L+ + Sbjct: 66 GDICDAQLLAGLLP--GADVVVHFAAESHVDRSIVGAADFMHTNVQGTYTVLQ------A 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 CL R +Q+STDEVYGS+ G + E P P+SPYSA+KA D + ++ TYG Sbjct: 118 CLDAGVG---RVVQVSTDEVYGSIATGSWPESDPLEPNSPYSASKACGDLIARSYFRTYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV L+ CSNNYGP+ +PEK+IPL IT +++G V LYGDG NVRDWL+V+DH RA+ LV Sbjct: 175 LPVCLTRCSNNYGPHQYPEKIIPLFITNLLDGRPVPLYGDGHNVRDWLHVDDHCRAIQLV 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ GR GE YN+GG E N D+ L+ + + +R + DRPGHDRRY++ Sbjct: 235 VEGGRPGEVYNVGGGTELSNHDLTAR-------LLAELGADWSSVRHVPDRPGHDRRYSV 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 D KIK+E+G+ P+ +E+GL +TV WY++N WW PL K Sbjct: 288 DWRKIKNELGYEPRIGLETGLTETVRWYVENRDWWEPLRK 327 >gi|224457654|ref|ZP_03666127.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159699|gb|ADA79090.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. tularensis NE061598] Length = 333 Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 156/326 (47%), Positives = 222/326 (68%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + +F++ DICD Sbjct: 8 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHTFIKGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 68 EVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF +STDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 128 EETSCRFHHVSTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHISRAYHHTYKLPV 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 188 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVEK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 248 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 308 KIQNELGWKPSQDFDKMFRQTIEFYL 333 >gi|259503869|ref|ZP_05746771.1| dTDP-glucose 4,6-dehydratase [Lactobacillus antri DSM 16041] gi|259168170|gb|EEW52665.1| dTDP-glucose 4,6-dehydratase [Lactobacillus antri DSM 16041] Length = 327 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 159/336 (47%), Positives = 230/336 (68%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ L+ +D LTYAGN+++L ++ + + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLEKHPDDNLINLDLLTYAGNIHNLDDVKDNPHYHFVKGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + + EF D IVNFAAESHVDRSIL + F+ TN+ GT LL+ + Sbjct: 61 VNRELVTHLVHEFNIDHIVNFAAESHVDRSILHPEVFVETNVQGTLALLDVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ +FLQ+STDEVYG+L G F+E+ P P+SPYSA+KAS+D +V A+ TYG+ Sbjct: 114 --REGVEKFLQVSTDEVYGTLGATGYFTEESPLQPNSPYSASKASADMMVRAYYETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKLIPL + +EG + +YG+G+N+RDWLYV DH +A+ LVL+ Sbjct: 172 VNITRCSNNYGPYQFPEKLIPLMTSNGMEGKDLPIYGNGKNIRDWLYVSDHCQAIDLVLR 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L S H I++++DR GHD+RYAID Sbjct: 232 DGKPGEIYNVGGHNERTNNEIVH---LIVDNL-GISEDH---IKYVKDRLGHDKRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI++E+GW P+ ++G+ KT+ WY +N WW+PL Sbjct: 285 TKIETELGWKPEYTFDTGIVKTIDWYKNNEDWWQPL 320 >gi|116629773|ref|YP_814945.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus gasseri ATCC 33323] gi|300361533|ref|ZP_07057710.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri JV-V03] gi|116095355|gb|ABJ60507.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri ATCC 33323] gi|300354152|gb|EFJ70023.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri JV-V03] Length = 360 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 176/337 (52%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +D LTYAGNL++LK++ + F F+++DI Sbjct: 16 MKVIVTGGAGFIGSNFIFYMLKKHPDYEIICLDSLTYAGNLSTLKDVMDNPNFKFVKLDI 75 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 76 RDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 128 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G T+ Sbjct: 129 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTF 186 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 187 HLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGKNVRDWLYVEDHCKAIDL 246 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 247 ILEKGTPGEVYNIGGHNEMHNIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 299 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 300 IDPEKIHNELGWLPETMFKDGIKKTIQWYLDNKEWWE 336 >gi|89256004|ref|YP_513366.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica LVS] gi|169656551|ref|YP_001428072.2| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367351|ref|ZP_04983377.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica 257] gi|89143835|emb|CAJ79046.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica LVS] gi|134253167|gb|EBA52261.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica 257] gi|164551619|gb|ABU61116.2| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 338 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 157/326 (48%), Positives = 221/326 (67%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + F++ DICD Sbjct: 13 ILVTGAAGFIGSNYVRIMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHIFIKGDICD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 73 EVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 132 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF ISTDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 133 EETSCRFHHISTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 192 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 193 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPIYGDGSNIRDWLYVEDHCDAIQTIVEK 252 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 253 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 312 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 313 KIQNELGWKPSQDFDKMFRQTIEFYL 338 >gi|194337309|ref|YP_002019103.1| dTDP-glucose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] gi|194309786|gb|ACF44486.1| dTDP-glucose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] Length = 349 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 222/333 (66%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R+ + + +DKLTYAGNL +L+++ + + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRHFLKSYPSYTITNLDKLTYAGNLANLRDVESNPNYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +E Q D +++ AAESHVDRSI EF+ TN++GT LL R W Sbjct: 61 TDGDFLLQLFQENQFDGVIHLAAESHVDRSIANPTEFVVTNVLGTVNLLNAARASWQSDY 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RF ISTDEVYGSL +GLF+E+ Y+P SPYSA+KASSD+ V A+ T+GIP Sbjct: 121 EGK----RFYHISTDEVYGSLGSEGLFTEETSYDPHSPYSASKASSDHFVRAYHDTFGIP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG + FPEKLIPL I ++ + +YG G+N+RDWL+V DH +A+ ++ Sbjct: 177 VVISNCSNNYGSFQFPEKLIPLFINNIVNRKPLPVYGKGENIRDWLWVVDHAQAIDVIFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G+ GE YNIGG+NE NID++ + ++D + + +E L+ ++ DR GHD RYAID Sbjct: 237 QGKSGETYNIGGHNEWSNIDLIRLLCRIMDGKLGRPSGESEKLVTYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SSK++ E+GW P + E GL TV WYL N W Sbjct: 297 SSKLQRELGWVPSISFEKGLELTVEWYLSNAEW 329 >gi|325300398|ref|YP_004260315.1| dTDP-glucose 4,6-dehydratase [Bacteroides salanitronis DSM 18170] gi|324319951|gb|ADY37842.1| dTDP-glucose 4,6-dehydratase [Bacteroides salanitronis DSM 18170] Length = 379 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 165/356 (46%), Positives = 227/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+++V+D LTYAGNL ++ K+I F F++ +ICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHEDIRIVVLDALTYAGNLATIAKDIDDERCF-FIKGNICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R E++ D I+NFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RNLADQLFSEYKFDCIINFAAESHVDRSIEDPQLFLQTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF Q+STDEVYGSL ++G F+E+ P P SPYS++KAS+D++VLA+ TY Sbjct: 124 QGYPTWRRDVRFHQVSTDEVYGSLGEEGYFTEETPLCPHSPYSSSKASADFIVLAYRDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPY FPEKLIPL I ++EG + +YG G NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYQFPEKLIPLVIKNILEGKRLPVYGKGTNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE---------------- 279 V++ G+ GE YN+GG+NE++NI+IV I + ++ + + Sbjct: 244 VVRNGQNGEVYNVGGHNEKQNIEIVRLIISTIRQIMETKPEYRKMLKKKELDENGQIRID 303 Query: 280 -----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID SKI ++GW P+ E G+ KTV WYLDN W Sbjct: 304 WINESLITFVKDRLGHDQRYAIDPSKISHDLGWLPETKFEDGIVKTVHWYLDNQEW 359 >gi|167010256|ref|ZP_02275187.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica FSC200] gi|290953227|ref|ZP_06557848.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica URFT1] gi|295313540|ref|ZP_06804130.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. holarctica URFT1] Length = 333 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 157/326 (48%), Positives = 221/326 (67%), Gaps = 3/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + F++ DICD Sbjct: 8 ILVTGAAGFIGSNYVRIMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEHNHIFIKGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 68 EVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELGL 127 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ RF ISTDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +PV Sbjct: 128 EETSCRFHHISTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLPV 187 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++K Sbjct: 188 TISNCSNNYGPYQHREKLIPVVINSCINYKPIPIYGDGSNIRDWLYVEDHCDAIQTIVEK 247 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+S Sbjct: 248 GVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDNS 307 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KI++E+GW P ++ + +T+ +YL Sbjct: 308 KIQNELGWKPSQDFDKMFRQTIEFYL 333 >gi|313900766|ref|ZP_07834258.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. HGF2] gi|312954436|gb|EFR36112.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. HGF2] Length = 342 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y+V+ V+V +D LTYAGNL + K + + F + DI Sbjct: 1 MKILVTGGAGFIGGNFVHYMVDKYPDDVIVNLDLLTYAGNLETCKPVEDKTNYKFYKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ + D +VNFAAESHVDRSI + F+ TN++GT LL+ +C Sbjct: 61 ADRAFVFDLFEKEKFDVVVNFAAESHVDRSIEDPESFVRTNVMGTTTLLD------AC-- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K R+ Q+STDEVYG L DK F+E+ P + SSPYS++KA++D VLA+ TY Sbjct: 113 -NKYGIQRYHQVSTDEVYGDLPLDKPDLFFTEETPLHTSSPYSSSKAAADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALAEESLPVYGTGENVRDWLHVYDHCVAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG +GE YN+GG+NER N+++V I L+ P+S LI+++EDR GHD RYA Sbjct: 232 IIRKGEVGEVYNVGGHNERTNLEVVKTILKALNK--PES-----LIKYVEDRKGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID K+++E+GW P+ N ++G+ +T+ WYLD WW+ Sbjct: 285 IDPYKLETELGWKPKYNFDTGIQQTIQWYLDYKEWWQ 321 >gi|189500843|ref|YP_001960313.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] gi|189496284|gb|ACE04832.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] Length = 354 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/332 (48%), Positives = 216/332 (65%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + R VN + ++ +D LTYAGNL + ++I + F++ DI D Sbjct: 9 ILVTGGAGFIGSHVVRRFVNAYPEYRITNLDALTYAGNLENFRDIEDKPNYRFVKADITD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++ AAESHVDRSI F+ TN+IGT LL R W+ Sbjct: 69 ASAMNELFEAEAFDGVIHLAAESHVDRSISNPSAFVMTNVIGTVNLLNAARAAWNGTYDG 128 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F ISTDEVYGSL G +F+E+ PY+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 129 K----LFYHISTDEVYGSLQHGKEMFTEETPYDPHSPYSASKASSDHFVRAYYDTYGLPA 184 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGPY FPEKLIPL I + + +YG G+NVRDWL+V DH A+ ++ K Sbjct: 185 VISNCSNNYGPYQFPEKLIPLFINNIRNRKPLPVYGKGENVRDWLWVVDHAEAIDVIFHK 244 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 G+ GE Y+IGGNNE KNID+V + ++D + ++ + ELI ++ DR GHD RYAIDS Sbjct: 245 GKPGETYDIGGNNEWKNIDLVHLLCSIMDRKLGRAGGESAELITYVTDRAGHDLRYAIDS 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK++ E+GW P + GL KTV WYL+N W Sbjct: 305 SKLQRELGWSPSIQFKEGLEKTVDWYLENAEW 336 >gi|154151291|ref|YP_001404909.1| dTDP-glucose 4,6-dehydratase [Candidatus Methanoregula boonei 6A8] gi|153999843|gb|ABS56266.1| dTDP-glucose 4,6-dehydratase [Methanoregula boonei 6A8] Length = 354 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 159/334 (47%), Positives = 221/334 (66%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEIS--QSNLFSFLQV 57 M+++VTG AGFIGS Y ++ + ++ +D L+YAGNL +L +S Q F F + Sbjct: 1 MKILVTGAAGFIGSNFVYYYLSRYPERTIIGLDNLSYAGNLENLSLLSPDQKARFVFEKA 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D I+ L ++ D I+NFAAE+HVDRSI F+ TNI+GT +LL+ + W Sbjct: 61 DITDTVQIKKILSKYPVDGIINFAAETHVDRSIHDPQVFLKTNILGTHVLLDAAKTIWHT 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +D +FLQ+STDEVYG+L G F+E P +P SPYSA+KAS+D +V A+ TYG Sbjct: 121 KEGGWEDGKKFLQVSTDEVYGTLGPSGYFTETTPLDPHSPYSASKASADLVVKAYHDTYG 180 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGP+ FPEKLIPL I + + +YGDG+ +RDWLYV DH RA+ LV Sbjct: 181 MPVNITRCSNNYGPWQFPEKLIPLLIQNALLHREIPVYGDGKQIRDWLYVGDHCRAIDLV 240 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G+ GE YNIGGNNER+NI I+ +I LL + + + LI +++DR GHDRRYAI Sbjct: 241 YESGKTGETYNIGGNNERENIVIIKKILVLLQDMTGDPHINDNLISYVKDRLGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKIK ++ W + + G+ +TV WYLD+ W Sbjct: 301 DASKIKRDLHWEHKVPFDEGIERTVRWYLDHREW 334 >gi|189459901|ref|ZP_03008686.1| hypothetical protein BACCOP_00534 [Bacteroides coprocola DSM 17136] gi|189433390|gb|EDV02375.1| hypothetical protein BACCOP_00534 [Bacteroides coprocola DSM 17136] Length = 379 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 163/360 (45%), Positives = 231/360 (64%), Gaps = 30/360 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ K++ F F++ +ICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHEDIKVVILDALTYAGNLGTIAKDVDNERCF-FIKGNICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE E++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RELADRLFSEYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL ++G F+E+ P P SPYSA+K S+D +V+A+ TY Sbjct: 124 NGYPTWRKDVRYHQVSTDEVYGSLGEEGFFTEETPLCPHSPYSASKTSADLIVMAYRDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKRLPVYGNGTNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE---------------- 279 V+++G+ GE YN+GG+NE++NI+IV + L+ + ++ + Sbjct: 244 VVRQGKNGEIYNVGGHNEKQNIEIVKLTIATIRRLMEEEPAYRKVLKKKELDENGEIRID 303 Query: 280 -----LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 LI F++DR GHD+RYAID +KI E+GW P+ E G+ KT+ WYL+N W + + Sbjct: 304 WINDSLITFVKDRLGHDQRYAIDPTKITRELGWTPETKFEDGIVKTIIWYLNNQDWVKSV 363 >gi|297374638|emb|CBL42925.1| dTDP-glucose 4,6-dehydratase [Candidatus Magnetobacterium bavaricum] Length = 331 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 165/341 (48%), Positives = 227/341 (66%), Gaps = 22/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGG GFIGS R++++ +V+ +D LTYAGN+N+LK++ + + F+ + Sbjct: 1 MRILVTGGCGFIGSNFIRHILDKYNDYEVVNLDALTYAGNVNNLKDVD-TKRYRFVHDSV 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + +++ DA+VNFAAESHVDRSI A F+ TN++G +LL+ R Sbjct: 60 ASADTVVGLIRDV--DAVVNFAAESHVDRSIEDAQPFLITNVMGVQVLLDAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K D RF+ ISTDEVYGSL D+G+F+E P P+SPYSA+K ++D LV A+ TYG Sbjct: 111 --KADIKRFVHISTDEVYGSLETDEGVFTETTPLGPNSPYSASKGAADLLVHAYFRTYGF 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV SNNYGPY FPEK IPL IT +I+G V LYG+G+NVRDW YV D+ RA+ +VL Sbjct: 169 PVCTVRPSNNYGPYQFPEKFIPLMITNLIDGQPVPLYGEGRNVRDWFYVGDNCRAIDMVL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG G+ YN GG +RKNI+IV ++ LD ++ K +S IR+++DRPGHD RYA+ Sbjct: 229 HKGTGGQVYNAGGLWQRKNIEIVHQV---LD-IMGKDHS---AIRYVKDRPGHDYRYALS 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 + KI +E+G+ PQ GL TV W+ DN WWWRPL + L Sbjct: 282 NDKIHAELGFTPQMQFRDGLEHTVRWFKDNQWWWRPLKERL 322 >gi|33594891|ref|NP_882534.1| dTDP-glucose 4,6-dehydratase [Bordetella parapertussis 12822] gi|33599166|ref|NP_886726.1| dTDP-glucose 4,6-dehydratase [Bordetella bronchiseptica RB50] gi|33564967|emb|CAE39914.1| dTDP-glucose 4,6-dehydratase [Bordetella parapertussis] gi|33575212|emb|CAE30675.1| dTDP-glucose 4,6-dehydratase [Bordetella bronchiseptica RB50] Length = 353 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 211/334 (63%), Gaps = 4/334 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + V+ +D LTYAGN +L + + DI Sbjct: 1 MSILVTGGAGFIGSNFVLGWLASGDEPVINLDLLTYAGNAANLAALRDDPRHLLVHGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L+E +P AIVNFAAESHVDR+I D F+ TN++GTF LLE R + + Sbjct: 61 DAPLVRRLLREHRPRAIVNFAAESHVDRAIRAPDAFVQTNVVGTFALLEAARAYCAEQDD 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 FRFL +STDEVYGSL F+E PY P++PYSA+KA+SD++V ++ HTYG+P Sbjct: 121 AAAAAFRFLHVSTDEVYGSLAPQAAPFTETHPYQPNNPYSASKAASDHMVRSYRHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++C NNYGP FPEKLIPL I + G + LYGDG +VRDWLYV DH AL VL+ Sbjct: 181 AITTHCCNNYGPRQFPEKLIPLVIHHALAGRALPLYGDGMHVRDWLYVADHCAALECVLR 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDA--LIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+ G YNIG + ER N+++V + LLD P H I FI +RPGHDRRYAI Sbjct: 241 DGQPGRTYNIGAHCERTNLEVVHAVCALLDQWRARPDGQPHASGIAFIPERPGHDRRYAI 300 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+ KI+ E+GW + E+GL +TV WYL++ W Sbjct: 301 DAGKIQRELGWRAATSFEAGLRETVRWYLNHPQW 334 >gi|229496045|ref|ZP_04389769.1| dTDP-glucose 4,6-dehydratase [Porphyromonas endodontalis ATCC 35406] gi|229317137|gb|EEN83046.1| dTDP-glucose 4,6-dehydratase [Porphyromonas endodontalis ATCC 35406] Length = 351 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 224/335 (66%), Gaps = 10/335 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TG AGFIGS + R+ V + +++++D LTYAGN+ +L+++ + DI Sbjct: 1 MNLLITGAAGFIGSHVARHFVRQYPEYRIILLDALTYAGNVANLEDLLDLPQVRLVVGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +++ + + D +V+ AAESHVDRSI F N++GT LLE R W Sbjct: 61 TDLPLLQALFAQERIDGVVHLAAESHVDRSISDPLLFARANVLGTLSLLETARAAW---- 116 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q+K + RF +STDEVYG+L + GLF+E PY P SPYSA+KASSD+ V A+ TYG+ Sbjct: 117 QEKSIRGRFYHVSTDEVYGALPLEGGLFTEKTPYAPHSPYSASKASSDHFVRAYHDTYGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+LSNCSNNYGPY FPEKLIPL I + + + +YG+G NVRDWLYVEDH RA+ L+ Sbjct: 177 DVVLSNCSNNYGPYQFPEKLIPLFINNIRQKLPLPVYGEGLNVRDWLYVEDHARAIDLIF 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYA 295 KGR GE YN+GG+NE NI+++ ++ +D ++ PK S LI +++DR GHD RYA Sbjct: 237 HKGRSGETYNVGGSNEWSNIELIKKLIETVDRVLGRPKGDS-LSLITYVQDRAGHDLRYA 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+SK+ +E+GW P + + GL +TV WY+DN W Sbjct: 296 IDASKLHTELGWTPSTSFDEGLEQTVRWYIDNAAW 330 >gi|120400364|gb|ABM21419.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 354 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 175/337 (51%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +D LTYAGNL++LK++ + F F+++DI Sbjct: 10 MKVIVTGGAGFIGSNFVFYMLKKHPDYEIICLDSLTYAGNLSTLKDVMDNPNFKFVKLDI 69 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 70 RDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 122 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G T+ Sbjct: 123 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTF 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 181 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGKNVRDWLYVEDHCKAIDL 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G+ GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 241 ILENGKPGEVYNIGGHNEMANIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 293 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 294 IDPEKIHNELGWLPETMFKDGIKKTIQWYLDNKDWWE 330 >gi|262037152|ref|ZP_06010644.1| dTDP-glucose 4,6-dehydratase [Leptotrichia goodfellowii F0264] gi|261748840|gb|EEY36187.1| dTDP-glucose 4,6-dehydratase [Leptotrichia goodfellowii F0264] Length = 402 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 166/381 (43%), Positives = 228/381 (59%), Gaps = 57/381 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK----IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ + ++ + I+V+V+D LTYAGNL ++KE + F +VDI Sbjct: 5 LVTGAAGFIGANYLKCILKKYEGKKDIKVIVVDSLTYAGNLGTIKEELEDKRVKFEKVDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I E D +VNFAAESHVDRSI F+ TNI+G LLE + W+ Sbjct: 65 RDRKEIERVFAENNVDYVVNFAAESHVDRSIENPQIFLETNILGAQNLLENAKKAWTVGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLDKG------------------------------L 144 + KD ++LQ++TDEVYGSL K Sbjct: 125 DENGYPVYKDGVKYLQVATDEVYGSLSKDYDDAVDLVIEDEDVKKVVKNRTNLKTYGDKF 184 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+E P +P SPYSA+KA +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I Sbjct: 185 FTEKTPLDPRSPYSASKAGADHIVIAYGETYKMPISITRCSNNYGPYHFPEKLIPLMIKN 244 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 ++EG + +YG G NVRDWLYVEDH + + LVL++G+ GE YNIGG NE KNI+IV Sbjct: 245 VLEGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREGKEGEIYNIGGFNEEKNINIV---K 301 Query: 265 FLLDALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 ++D L + S+ E LI +++DR GHD RYAID SKI ++GW+P Sbjct: 302 LVIDILKEEIESNEEYKKVLKTDINNINYDLITYVQDRLGHDMRYAIDPSKIAKDLGWYP 361 Query: 310 QENMESGLNKTVCWYLDNNWW 330 + + E+G+ KT+ WYL+N W Sbjct: 362 ETDFETGIRKTIKWYLENQNW 382 >gi|218674763|ref|ZP_03524432.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli GR56] Length = 286 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 150/266 (56%), Positives = 190/266 (71%), Gaps = 4/266 (1%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 L+ +P AIVNFAAESHVDRSI G +EFI TNI+GTF LLE TR + + ++ + FRF Sbjct: 3 LRSHRPRAIVNFAAESHVDRSIHGPEEFIQTNIVGTFRLLEATRGFLAAQNEAFRASFRF 62 Query: 129 LQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 L +STDEVYGSL + FSE Y P+SPYSA+KA+SD+LV A+ HTYG+PVL +NCSN Sbjct: 63 LHVSTDEVYGSLAPTEAAFSEHRKYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSN 122 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 NYGPYHFPEKLIPL I + G + +YGDG VRDWL+V+DH A+ VL+ G++GE Y Sbjct: 123 NYGPYHFPEKLIPLVIHNALSGKQIPIYGDGMQVRDWLFVKDHCSAIRRVLENGKVGETY 182 Query: 247 NIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 NIGG NE N+ +V + +LD L +P S+ I F+ DRPGHDRRYAID+ KI+ + Sbjct: 183 NIGGRNELTNLSVVNTLCEILDELRPLPDGASYKSQIAFVRDRPGHDRRYAIDADKIERD 242 Query: 305 IGWFPQENMESGLNKTVCWYLDNNWW 330 + W P E E+G+ KTV WYL N W Sbjct: 243 LDWRPSETFETGIRKTVEWYLANEAW 268 >gi|187934855|ref|YP_001887437.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B str. Eklund 17B] gi|187723008|gb|ACD24229.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B str. Eklund 17B] Length = 339 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/337 (48%), Positives = 224/337 (66%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y++N +++ +D LTYAGN+ +L+ + S FSF ++DI Sbjct: 1 MKIVVTGGAGFIGGNFVHYMLNKYNDYKIICVDALTYAGNMETLESVKDSKNFSFHKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + K+ PD +VNFAAESHVDRSI + F+ TNI+GT +L++ +C+ Sbjct: 61 ADRKAVYDMFKKENPDIVVNFAAESHVDRSIENPEIFLKTNIMGTAVLMD------ACIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 115 YGIK---RYHQVSTDEVYGDLPIDRPDLFFTEETPIHTSSPYSSSKASADLLVGAYNRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +S CSNNYGPYHFPEKLIPL I + + +YG G+N+RDWLYVEDH RA+ + Sbjct: 172 GLQTTISRCSNNYGPYHFPEKLIPLMIANALNDKELPVYGSGENIRDWLYVEDHCRAIDI 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ G IGE YNIGG+NER N+D+V +I + ELI+F+ DR GHD RYA Sbjct: 232 IIHNGTIGEVYNIGGHNERSNLDVV-------KTIIHELGKSEELIKFVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID SKI SE+GW P + + G+ KT+ WYLDN WW Sbjct: 285 IDPSKIHSELGWLPTTSFDEGIKKTIKWYLDNRTWWE 321 >gi|229916911|ref|YP_002885557.1| dTDP-glucose 4,6-dehydratase [Exiguobacterium sp. AT1b] gi|229468340|gb|ACQ70112.1| dTDP-glucose 4,6-dehydratase [Exiguobacterium sp. AT1b] Length = 350 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 156/335 (46%), Positives = 222/335 (66%), Gaps = 14/335 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS ++ + ++L +D LTYAGNL +++ L+ F +VDI D Sbjct: 4 ILVTGGAGFIGSNFIKHFRDKHPTSRILNVDALTYAGNLENVQAFEHDPLYVFRKVDIRD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I F+ D +V+FAAESHVDRSIL + F++TNI+GT +LL+ W S D Sbjct: 64 RPAIDELFSLFEIDEVVHFAAESHVDRSILEPELFLSTNILGTQVLLDAAMRHWKRYSDD 123 Query: 122 K-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K +D F+ +STDEVYGSL + G F+E P P+SPYSA+KA SD LV ++ TY Sbjct: 124 KYSREYRDDVCFVHVSTDEVYGSLGETGFFTEKTPLAPNSPYSASKAGSDLLVRSYHETY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ ++ CSNNYGPY FPEKLIPL + + + +YGDG ++RDWL+V+DH A+ L Sbjct: 184 GLPIKITRCSNNYGPYQFPEKLIPLMVHHCMTDQLLPVYGDGGHIRDWLHVQDHCEAINL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +KG++GE YNIGG+NE+ N+++V I D +P + I+F+ DRPGHDRRYA Sbjct: 244 VRQKGQVGEVYNIGGHNEKTNLELVRTILRAFD--LPD-----DRIQFVTDRPGHDRRYA 296 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID+ K++ E+GW P+ + E G+ +T+ WY + W Sbjct: 297 IDAKKMQDELGWVPRYSFEQGIEETIEWYRSHPEW 331 >gi|282165387|ref|YP_003357772.1| dTDP-glucose 4,6-dehydratase [Methanocella paludicola SANAE] gi|282157701|dbj|BAI62789.1| dTDP-glucose 4,6-dehydratase [Methanocella paludicola SANAE] Length = 319 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 216/336 (64%), Gaps = 22/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTG AGFIG+ +++N I VLV DKLTYAGNL++LK+I F++ DI Sbjct: 1 MSLMVTGAAGFIGANFAHFILNKHPGIDVLVYDKLTYAGNLDNLKDIRGR--IKFVKGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + A+KE D I+NFAAE+HVDRSI A +F+ +N+ G + +LE R Sbjct: 59 CDAEAVGKAIKEHGVDEIINFAAETHVDRSIDSASDFLESNVKGVYTMLEAAR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D + LQISTDEVYGS+ G F E NPS+PYSA KA+ D L ++ +TY +PV Sbjct: 112 --KYDIKKLLQISTDEVYGSIQDGSFYETSNINPSNPYSAAKAAGDLLARSYYNTYRLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++ SNN+GPY FPEKLIPL I + + + +YG G NVRDW+YVED+ + V K Sbjct: 170 LITRSSNNFGPYQFPEKLIPLMILKAMRNEPLPVYGTGMNVRDWIYVEDNCAGIDTVFHK 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDS 298 GR+GE YNIGG NE+ N+++V LI K LI F++DRPGHD RY+++S Sbjct: 230 GRLGEVYNIGGGNEKPNLEVV--------RLILKQLGKPGSLITFVKDRPGHDLRYSLNS 281 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K K+ +GW P E + KT+ WY++N WWWRPL Sbjct: 282 DKTKA-LGWKPAYTFEDAMKKTIDWYVNNEWWWRPL 316 >gi|146298118|ref|YP_001192709.1| dTDP-glucose 4,6-dehydratase [Flavobacterium johnsoniae UW101] gi|146152536|gb|ABQ03390.1| dTDP-glucose 4,6-dehydratase [Flavobacterium johnsoniae UW101] Length = 348 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 219/332 (65%), Gaps = 7/332 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R VN + Q+ +D LTYAGNL ++ ++ + ++F++ D+ Sbjct: 3 KILITGGAGFIGSHVVRRFVNKYPEYQIYNLDALTYAGNLENIIDVENKSNYTFVKGDVV 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I D +++ AAESHVDRSI F+ TN+IGT LL + W + Sbjct: 63 NEDFINELFNIHNFDGVLHLAAESHVDRSIEDPLAFVKTNVIGTINLLNAAKNQW----K 118 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + RF ISTDEVYGSL GLF+E Y+P+SPYSA+KASSD+ V A+G TYG+P Sbjct: 119 DNFEGKRFYHISTDEVYGSLGIDGLFTETTSYDPNSPYSASKASSDHFVRAYGETYGLPY 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +L+NCSNNYG YHFPEKLIPL I +I + +YGDG RDWL+VEDH A+ LV + Sbjct: 179 VLTNCSNNYGSYHFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLFVEDHAIAIDLVFHE 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ E YNIGG NE KNID+V + ++D + + +E LI +++DRPGHD RYAID+ Sbjct: 239 GKNHETYNIGGFNEWKNIDLVRLLCQIMDRKLGRKKDASEKLITYVKDRPGHDLRYAIDA 298 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI E+GW P E GL KT+ WYL+N W Sbjct: 299 SKITKELGWKPSVTFEEGLEKTIDWYLNNQEW 330 >gi|153809506|ref|ZP_01962174.1| hypothetical protein BACCAC_03824 [Bacteroides caccae ATCC 43185] gi|149127887|gb|EDM19110.1| hypothetical protein BACCAC_03824 [Bacteroides caccae ATCC 43185] Length = 378 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 165/357 (46%), Positives = 232/357 (64%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L ++V+++D LTYAGNL ++ K+I F F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHSDVKVVILDALTYAGNLGTIAKDIDNERCF-FIKGDICS 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + +D Sbjct: 64 REVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGKD 122 Query: 122 K------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ T Sbjct: 123 EQGYPTWRKGVRYHQVSTDEVYGSLGAEGFFTEATPLCPHSPYSASKTSADMVVMAYHDT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 183 YKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAID 242 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPK 273 LV+++G+ GE YN+GG+NE+ N++IV I L+ + I Sbjct: 243 LVVREGKEGEVYNVGGHNEKTNLEIVKLTISTIHRLMTEHPEYRQMLKKKVKGENGEISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 303 DWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQPW 359 >gi|253583525|ref|ZP_04860723.1| dTDP-glucose 4,6-dehydratase [Fusobacterium varium ATCC 27725] gi|251834097|gb|EES62660.1| dTDP-glucose 4,6-dehydratase [Fusobacterium varium ATCC 27725] Length = 386 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/378 (43%), Positives = 225/378 (59%), Gaps = 54/378 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y++ KI+++V+DKLTYAGN+ +++E S F++ DIC+ Sbjct: 5 LVTGAAGFIGTNFVKYMLEKYREKIRIVVLDKLTYAGNIENIQEEIDSKKIDFVKGDICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + ++ D +VNFAAESHVDRSI F+ TNI+GT LLE ++ +WS + Sbjct: 65 RELVEDIFSRYEIDYVVNFAAESHVDRSISNPQIFLETNILGTQNLLEVSKQFWSIGRDE 124 Query: 122 K-----KDQFRFLQISTDEVYGSLDKG-----------------------------LFSE 147 K +FL ISTDEVYGSL K F+E Sbjct: 125 NGYPIYKVGKKFLHISTDEVYGSLSKDYTEAKELVLNDRVKKVAEGRKNLKTYGDKFFTE 184 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 + P +P SPYSA+K SSD +V A+ TY P+ ++ CSNNYGPY FPEKLIPL I ++E Sbjct: 185 ETPLDPRSPYSASKTSSDMIVRAYAETYKFPMNITRCSNNYGPYQFPEKLIPLIIKNILE 244 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YGDG NVRDWLYV+DH +A+ +V+ GR+GE YNIGG NE KNI+IV + Sbjct: 245 GKKLPVYGDGSNVRDWLYVKDHNKAVDMVINNGRLGEVYNIGGFNEEKNINIV---KLTI 301 Query: 268 DALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 D + E LI +++DR GHD RYAID KI +E+GW+P+ + Sbjct: 302 DTIAKIMKEEPEYRRVLKTDVTKISYDLISYVQDRLGHDARYAIDPEKIVTELGWYPETS 361 Query: 313 MESGLNKTVCWYLDNNWW 330 + G+ +T+ WYLDN W Sbjct: 362 FDKGIEQTIKWYLDNQEW 379 >gi|171466617|gb|ACB46492.1| sugar 4,6-dehydratase [Actinomadura kijaniata] Length = 342 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 157/352 (44%), Positives = 228/352 (64%), Gaps = 23/352 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 R++VTGGAGFIGS R LV V+V+DKLTYAGN +L +S F + Sbjct: 6 RVVVTGGAGFIGSHYVRQLVTGAYPAFADASVVVLDKLTYAGNEENLAPVSDDRRFELVV 65 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+CD E + L D +V+FAAESHVDRSI+G+ +F+ TN++GT + + + Sbjct: 66 GDVCDGELLAEVLP--GADVVVHFAAESHVDRSIVGSTDFMQTNVLGTHSVFQ------A 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 CL K R +Q+STDEVYGS++ G ++ED P P+SPYSA+KA++D + ++ TYG Sbjct: 118 CLDAGVK---RVVQVSTDEVYGSIEAGSWTEDEPLEPNSPYSASKAAADLVARSFYRTYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY +PEK+IPL IT ++ G + LYGDG NVRDWL+V+DH RA+ LV Sbjct: 175 LPVCVTRCSNNYGPYQYPEKIIPLFITNLLLGEPLPLYGDGGNVRDWLHVDDHCRAVQLV 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ GR G YNIGG E N ++ L+ ++ + +R + DRPGHD+RY++ Sbjct: 235 VEGGRPGHVYNIGGGTELTNRELTAR-------LLKETGADWSAVRNVPDRPGHDQRYSV 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWK 348 D +KI +E+G+ P+ +E+GL +TV WY++N WW PL ++ + D S + Sbjct: 288 DWTKISAELGYLPRVGLETGLAETVRWYVENRSWWEPLREKAERARDGSPAR 339 >gi|224025633|ref|ZP_03643999.1| hypothetical protein BACCOPRO_02373 [Bacteroides coprophilus DSM 18228] gi|224018869|gb|EEF76867.1| hypothetical protein BACCOPRO_02373 [Bacteroides coprophilus DSM 18228] Length = 397 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 166/359 (46%), Positives = 228/359 (63%), Gaps = 36/359 (10%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + + F++ +ICDR Sbjct: 23 LVTGAAGFIGANYLKYILAKHDDIRVVVLDALTYAGNLATISKDIDNERCYFVKGNICDR 82 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W Sbjct: 83 SLADQLFADYKFDYIVNFAAESHVDRSIDNPQLFLQTNILGTQNLLDAARRAWVT----G 138 Query: 123 KDQF---------RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 KD+F RF Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D +V A+ Sbjct: 139 KDEFGYPTWRKDVRFHQVSTDEVYGSLGPEGYFTEETPLCPHSPYSASKTSADLIVTAYR 198 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A Sbjct: 199 DTYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKRLPVYGNGSNVRDWLYVEDHCKA 258 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE------------- 279 + LV++KGR GE YN+GG+NE++NI+IV + L+ + ++ + Sbjct: 259 IDLVVRKGRNGEIYNVGGHNEKQNIEIVKLTIETIRRLMTEEPAYRKVLKKKELDANGNI 318 Query: 280 --------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI F++DR GHD+RYAID +KI +E+GW+P+ E G+ KT+ WYL+N W Sbjct: 319 SIDWINDSLITFVKDRLGHDQRYAIDPTKITNELGWYPETKFEDGIVKTIIWYLNNQEW 377 >gi|189500838|ref|YP_001960308.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] gi|189496279|gb|ACE04827.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] Length = 355 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 222/336 (66%), Gaps = 13/336 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R+ V+ + + +DKLTYAGNL +L+++ + + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRHFVDTYPQYTITNLDKLTYAGNLENLRDVEDRSNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + + D +++ AAESHVDRSI EF+ TN++GT LL +R W Sbjct: 61 TDGDAMIILFAQERFDGVIHLAAESHVDRSIANPTEFVVTNVLGTVNLLNASRALW---- 116 Query: 120 QDKKDQF---RFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KD F RF +STDEVYG+L +G+F+E+ Y+P SPYSA+KASSD+ V A+ TY Sbjct: 117 ---KDDFGGKRFYHVSTDEVYGALGGEGMFTEETSYDPHSPYSASKASSDHFVRAYHDTY 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV++SNCSNNYG + FPEKLIPL I + + +YG G+N+RDWL+V DH A+ Sbjct: 174 GLPVVISNCSNNYGSFQFPEKLIPLFINNICNNKPLPVYGKGENIRDWLWVVDHASAIDA 233 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 + KG+ GE YNIGGNNE NI ++ + ++D + +S +E LI ++ DR GHD RY Sbjct: 234 IYHKGKQGETYNIGGNNEWTNIALIRLLCSIMDRKLGRSEGESEKLITYVTDRAGHDFRY 293 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 AIDSSK++ E+GW P E GL KTV WYL N W Sbjct: 294 AIDSSKLQRELGWTPSLQFEEGLEKTVDWYLQNGEW 329 >gi|254828461|ref|ZP_05233148.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N3-165] gi|258600857|gb|EEW14182.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N3-165] Length = 328 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 234/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHVFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWKPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|47094941|ref|ZP_00232554.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes str. 1/2a F6854] gi|224500275|ref|ZP_03668624.1| hypothetical protein LmonF1_11614 [Listeria monocytogenes Finland 1988] gi|254898743|ref|ZP_05258667.1| hypothetical protein LmonJ_02970 [Listeria monocytogenes J0161] gi|254911768|ref|ZP_05261780.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes J2818] gi|254936094|ref|ZP_05267791.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes F6900] gi|284801415|ref|YP_003413280.1| hypothetical protein LM5578_1166 [Listeria monocytogenes 08-5578] gi|284994557|ref|YP_003416325.1| hypothetical protein LM5923_1120 [Listeria monocytogenes 08-5923] gi|47016559|gb|EAL07479.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes str. 1/2a F6854] gi|258608684|gb|EEW21292.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes F6900] gi|284056977|gb|ADB67918.1| hypothetical protein LM5578_1166 [Listeria monocytogenes 08-5578] gi|284060024|gb|ADB70963.1| hypothetical protein LM5923_1120 [Listeria monocytogenes 08-5923] gi|293589720|gb|EFF98054.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes J2818] Length = 328 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 234/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHVFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|293375671|ref|ZP_06621944.1| dTDP-glucose 4,6-dehydratase [Turicibacter sanguinis PC909] gi|325842953|ref|ZP_08167805.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] gi|292645722|gb|EFF63759.1| dTDP-glucose 4,6-dehydratase [Turicibacter sanguinis PC909] gi|325489479|gb|EGC91847.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] Length = 341 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 168/355 (47%), Positives = 234/355 (65%), Gaps = 26/355 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y + K V+ +D LTYAGNL + ++ + + F++ DI Sbjct: 7 MKLLVTGGAGFIGSNFINYRLKKYPKDTVVNLDALTYAGNLENCQKFESNLNYQFVKGDI 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I S ++ Q D +VNFAAESHVDRSI D F+ TNI+GT +L++ +R + Sbjct: 67 TDREFIFSLFEKEQFDVVVNFAAESHVDRSITQPDLFLKTNILGTQVLMDASREYKVS-- 124 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF Q+STDEVYG L D+ LF+E P + SSPYSA+KAS+D LVLA+ T+ Sbjct: 125 -------RFHQVSTDEVYGDLPLDRPDLLFTESSPLHTSSPYSASKASADLLVLAYYRTF 177 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I ++G + +YG G VRDWL+VEDH +A+ L Sbjct: 178 GLPVTISRCSNNYGPYQFPEKLIPLMIRCGLKGEKLPVYGTGCQVRDWLHVEDHCQAIDL 237 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KGR+GE YN+GG+NER N+++V I L+ S +L F+EDR GHD+RYA Sbjct: 238 ILQKGRLGEVYNVGGHNERTNLEVVMTIMRALNI------SENQL-SFVEDRLGHDQRYA 290 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNL 350 ID +KI++E+GW+P + + G+ +T+ WYL + W + + +Y K+ N Sbjct: 291 IDPTKIQTELGWYPVHSFDDGIQETIEWYLSHQDWCDHIER-----GEYQKYGNF 340 >gi|313896221|ref|ZP_07829774.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 137 str. F0430] gi|320529279|ref|ZP_08030369.1| dTDP-glucose 4,6-dehydratase [Selenomonas artemidis F0399] gi|312975020|gb|EFR40482.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 137 str. F0430] gi|320138453|gb|EFW30345.1| dTDP-glucose 4,6-dehydratase [Selenomonas artemidis F0399] Length = 336 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 163/336 (48%), Positives = 219/336 (65%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M LIVTGGAGFIG+ Y L + +++ D LTYAGN+ +L E +S F+F++ DI Sbjct: 1 MNLIVTGGAGFIGANFVYYELRTHPEDRIVCYDVLTYAGNIATLDEAKRSPNFTFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + + + +PD ++NFAAESHVDRSI + F+ TNIIGT ILL+ R Sbjct: 61 ADRAAVYALFEREKPDVVINFAAESHVDRSIENPEIFLQTNIIGTSILLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KA +D LV A+ TY Sbjct: 114 --KYGITRYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKAGADLLVQAYARTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIPV +S CSNNYG + FPEKLIPL I R + G + +YGDG NVRDWL+V+DH A+ Sbjct: 172 GIPVSISRCSNNYGAFQFPEKLIPLMIIRALRGEKLPVYGDGLNVRDWLHVDDHCAAIDA 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++++G GE YN+GG+NER NID+V I LL ELI ++EDR GHDRRYA Sbjct: 232 IVRRGDAGEIYNVGGHNERSNIDVVRTILRLLG-------KGEELISYVEDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI ++GW P+ + E G+ T+ WY ++ WW Sbjct: 285 IDPAKIGRDLGWQPETSFEDGIRSTIRWYEEHQEWW 320 >gi|282861856|ref|ZP_06270920.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. ACTE] gi|282563672|gb|EFB69210.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. ACTE] Length = 328 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 159/335 (47%), Positives = 217/335 (64%), Gaps = 20/335 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS R L+ + V V+DKLTYAGN +L E+ F+F+Q DI Sbjct: 5 ILVTGGAGFIGSHYVRTLLGPEGPGDVAVTVLDKLTYAGNPANLDEVRDHPGFAFVQGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + + E D +V+FAAESHVDRSI G EF+ TN++GT L+ L Sbjct: 65 CDPELVGKLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVVGTHTLIHAAHL------ 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ V Sbjct: 117 ---AGIKTFVHISTDEVYGSIDEGSWPETHPLEPNSPYSSAKASSDLIALSYHRTHGLDV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYG +HFPEK+IPL +T +++G V LYGDG NVRDWL+++DHV+ + LV K Sbjct: 174 RVTRCSNNYGHHHFPEKVIPLFVTNLLDGKTVPLYGDGANVRDWLHIDDHVQGIELVRTK 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N ++ G LL+A + ++EDR GHDRRY++D + Sbjct: 234 GRAGEVYNIGGGTELSNKELT---GLLLEAC---GADWETSVTYVEDRKGHDRRYSVDCT 287 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+ E+G+ P+++ + GL +TV WY DN WW PL Sbjct: 288 KIREELGYEPRKDFKQGLAETVQWYRDNRAWWEPL 322 >gi|148643369|ref|YP_001273882.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Methanobrevibacter smithii ATCC 35061] gi|148552386|gb|ABQ87514.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Methanobrevibacter smithii ATCC 35061] Length = 336 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 226/331 (68%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS +Y+V+ + +D LTY GNL +LK+I + ++F++ DI Sbjct: 3 KILITGGAGFIGSNFVKYMVDKYPDYEFTNLDALTYCGNLENLKDIEDKDNYTFVKGDIG 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + + +K+ D ++NFAAESHVDRSI + FI +N++GT +LL + + Sbjct: 63 DKEVVNNLVKD--SDYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVE--- 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++QISTDEVYG+L + G F+E P P+SPYSA+KAS+D +V A+ T+ +PV Sbjct: 118 ------KYVQISTDEVYGTLGETGYFTETTPLQPNSPYSASKASADLVVRAYYETFNLPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I+ +E + +YGDG+N+RDWL+V DH A+ LVL Sbjct: 172 NITRCSNNYGPYQFPEKLIPLMISNALEDKKLPIYGDGKNIRDWLHVYDHCTAIDLVLHD 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YNIGG+NER+NI IV +L+AL LI F++DR GHDRRYAIDS+ Sbjct: 232 GKLGEVYNIGGHNERQNIQIV---KLILEALGKDE----SLIEFVDDRLGHDRRYAIDST 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ +GW P+ E+G+ +T+ WYLDN W Sbjct: 285 KIRENLGWEPKYTFETGIKETIQWYLDNQDW 315 >gi|262199536|ref|YP_003270745.1| dTDP-glucose 4,6-dehydratase [Haliangium ochraceum DSM 14365] gi|262082883|gb|ACY18852.1| dTDP-glucose 4,6-dehydratase [Haliangium ochraceum DSM 14365] Length = 373 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 142/330 (43%), Positives = 208/330 (63%), Gaps = 3/330 (0%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGG GFIGS R L + ++V+ +DKL YAG+ +L ++++ + ++ DI DR Sbjct: 17 LVTGGCGFIGSHFVRSSLRAEPGLRVVNLDKLNYAGSAGNLDDLAEHPRYRLVRGDIGDR 76 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 C++ E +PDA+V+ AAESHVDRSI F+ TNI+GTF LLE R +++ ++ Sbjct: 77 ACVQQLFDEHRPDAVVHLAAESHVDRSIDAPASFVETNIVGTFTLLEAARAYFAACPAER 136 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +D RF+ +STDEVYGS D F E Y PSSPY+A+KAS+D+LV+A TYG P L Sbjct: 137 RDALRFVHVSTDEVYGSAAEDGPAFDETARYAPSSPYAASKASADHLVMAAHRTYGFPAL 196 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++ N +G + FPEK +P + ++G + +YGDG+N RDWL V +H L VL +G Sbjct: 197 VTHGCNTFGSHQFPEKFLPTVVLNALDGKDIPVYGDGRNERDWLAVSEHCDGLRAVLARG 256 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IG+ YNI R N+++ + ++DAL+P + L+RF+ DRPGHDRRYA+ + K Sbjct: 257 HIGQSYNIATGRRRSNLEMARRVCAVVDALVPAKAPSSRLLRFVTDRPGHDRRYAVTTDK 316 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I+ + GW +S L TV WY+ N W Sbjct: 317 IRRDTGWSAASEFDSALRDTVAWYIANRAW 346 >gi|297194405|ref|ZP_06911803.1| dTDP-glucose 4,6-dehydratase [Streptomyces pristinaespiralis ATCC 25486] gi|197718785|gb|EDY62693.1| dTDP-glucose 4,6-dehydratase [Streptomyces pristinaespiralis ATCC 25486] Length = 328 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 221/337 (65%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 +++VTGGAGFIGS R L+ + V V+DKLTYAGN +L E+ F F+Q Sbjct: 3 TKILVTGGAGFIGSHYVRTLLGPGGPGDVAVTVLDKLTYAGNPANLDEVRDHPGFGFVQG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD + + + E D +V+FAAESHVDRSI G EF+ TN++GT L++ Sbjct: 63 DICDADLVGKLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVLGTHTLVD-------- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + RF+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ Sbjct: 113 -AAHRAGVERFVHISTDEVYGSIDEGSWPETHPLEPNSPYSSAKASSDLIALSYHRTHGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYG +HFPEK+IPL IT +++G V LYGDG NVRDWL+++DHV+ + LV Sbjct: 172 DVRVTRCSNNYGHHHFPEKVIPLFITNLLDGGKVPLYGDGGNVRDWLHIDDHVQGIELVR 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LL+A + E ++ DR GHDRRY++D Sbjct: 232 TKGRSGEVYNIGGGTELSNKELT---GLLLEACGADWDTSVE---YVTDRKGHDRRYSVD 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI++E+G+ P+++ +GL +TV WY DN WW PL Sbjct: 286 CTKIRAELGYEPRKDFATGLAETVQWYRDNRAWWEPL 322 >gi|253583552|ref|ZP_04860750.1| dTDP-glucose 4,6-dehydratase [Fusobacterium varium ATCC 27725] gi|251834124|gb|EES62687.1| dTDP-glucose 4,6-dehydratase [Fusobacterium varium ATCC 27725] Length = 386 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 163/378 (43%), Positives = 225/378 (59%), Gaps = 54/378 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y++ I+++V+DKLTYAGN+ +++E S F++ DIC+ Sbjct: 5 LVTGAAGFIGTNFVKYMLEKYGKSIRIIVLDKLTYAGNIENIQEEIDSKKIDFVKGDICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + ++ D +VNFAAESHVDRSI F+ TNI+GT LLE ++ +WS + Sbjct: 65 RELVEDIFSRYEIDYVVNFAAESHVDRSISNPQIFLETNILGTQNLLEVSKKFWSIGKDE 124 Query: 122 K-----KDQFRFLQISTDEVYGSLDKG-----------------------------LFSE 147 K+ +FL ISTDEVYGSL K F+E Sbjct: 125 NGYPVYKEGKKFLHISTDEVYGSLTKDYAEAKELVLNDRVKKVAEGRKNLKTYGDRFFTE 184 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 D P +P SPYSA+K SSD +V A+ TY P+ ++ CSNNYGPY FPEKLIPL I ++E Sbjct: 185 DTPLDPRSPYSASKTSSDMIVRAYAETYKFPMNITRCSNNYGPYQFPEKLIPLIIKNILE 244 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YGDG NVRDWLYV+DH +A+ +V+ GR+GE YNIGG NE KNI+IV + Sbjct: 245 GKKLPVYGDGSNVRDWLYVKDHNKAVDMVINNGRLGEVYNIGGFNEEKNINIV---KLTI 301 Query: 268 DALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 D + E LI +++DR GHD RYAID KI +E+GW+P+ + Sbjct: 302 DTIAKIMKEEPEYRRVLKTDVTKISYDLISYVQDRLGHDARYAIDPEKIVTELGWYPETS 361 Query: 313 MESGLNKTVCWYLDNNWW 330 + G+ +T+ WYL+N W Sbjct: 362 FDKGIEQTIRWYLNNQEW 379 >gi|160945706|ref|ZP_02092932.1| hypothetical protein FAEPRAM212_03238 [Faecalibacterium prausnitzii M21/2] gi|158443437|gb|EDP20442.1| hypothetical protein FAEPRAM212_03238 [Faecalibacterium prausnitzii M21/2] Length = 354 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 155/330 (46%), Positives = 218/330 (66%), Gaps = 3/330 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIGS Y++ +LV +DKLTYAGNL +LK++ F+Q DICD+ Sbjct: 5 LITGCAGFIGSNFVHYMLKKYPEILLVNLDKLTYAGNLENLKDVEGDPRHVFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQD 121 E + S ++ D ++NFAAESHVDRSI + F+ +N++GT LL+ + W+ ++ Sbjct: 65 ELVESLFAKYDFDYVINFAAESHVDRSIKNPEIFVQSNVMGTVNLLQRAKEAWYDADAKT 124 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ ++LQ+STDEVYG+L G F E P P SPYS++KAS+D V+A+ TYG+PV Sbjct: 125 WKEGKKYLQVSTDEVYGALGADGFFMETTPLCPHSPYSSSKASADMFVMAFHDTYGMPVN 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ +V G Sbjct: 185 ITRCSNNYGPYQFPEKLIPLMINNVKHHKQLPVYGDGMQIRDWLYVEDHCKAIDMVANGG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +IGE YN+GG+NER NI IV I L + +LI+ + DR GHDRRY ID +K Sbjct: 245 KIGEVYNVGGHNERPNIFIVKTIINQLHDRLQDEGISEDLIKHVADRLGHDRRYGIDPTK 304 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK+++GW+P+ E G+ T+ WYL++ W Sbjct: 305 IKNDLGWYPETPFEKGIVLTIDWYLNHEEW 334 >gi|168212614|ref|ZP_02638239.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens CPE str. F4969] gi|170715852|gb|EDT28034.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens CPE str. F4969] Length = 349 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 163/329 (49%), Positives = 223/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N + I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLNKYEDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + S LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEISEN-LIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|16803123|ref|NP_464608.1| hypothetical protein lmo1083 [Listeria monocytogenes EGD-e] gi|224502603|ref|ZP_03670910.1| hypothetical protein LmonFR_08789 [Listeria monocytogenes FSL R2-561] gi|254830147|ref|ZP_05234802.1| hypothetical protein Lmon1_02260 [Listeria monocytogenes 10403S] gi|16410485|emb|CAC99161.1| lmo1083 [Listeria monocytogenes EGD-e] Length = 328 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 234/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKHDDYKVVNLDLLTYAGTMSNLEDIKENPNHVFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|188588705|ref|YP_001922560.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] gi|188498986|gb|ACD52122.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] Length = 350 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 164/346 (47%), Positives = 225/346 (65%), Gaps = 8/346 (2%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++N K I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLNKYKDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S +++ D + +FAAESHVDRSI + F TN++GT +L + W Sbjct: 65 ELVSSLFEKYDIDYVAHFAAESHVDRSIKEPEIFAQTNVLGTVNMLNCAKNAWENEDGSF 124 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +FL +STDEVYGSL D G F E P +P SPYS++KASSD +V A+ TY +P+ + Sbjct: 125 KKGVKFLHVSTDEVYGSLGDTGFFIETTPIDPHSPYSSSKASSDLMVKAYYDTYKMPINI 184 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 185 TRCSNNYGPFQFPEKLIPLLINNCLHHKELPVYGDGMNIRDWLFVEDHAKAIDMVINDGR 244 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + ++ + K + LI+++EDR GHDRRY I KI Sbjct: 245 LGEVYNVGGHNERTNIQIVKTVIAYINENVDKDVTEN-LIKYVEDRKGHDRRYGIAPDKI 303 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 K E+GW+P+ E G+ KT+ WYLDN W + + DY K+ Sbjct: 304 KEELGWYPETTFEVGIKKTIKWYLDNKEWMKNV-----TSGDYQKY 344 >gi|255654313|ref|ZP_05399722.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-23m63] Length = 327 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 165/338 (48%), Positives = 229/338 (67%), Gaps = 21/338 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS Y++N +V +D LTYAGNL +L EI ++ + F++ DI Sbjct: 3 KILITGGAGFIGSNFVHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDNSNYKFVRGDIS 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + +E + D +VNFAAESHVDRS+ D FI TNIIGT +LL+ + Sbjct: 63 NREQMYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASI-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ QISTDEVYG L D+ F+E P NPSSPYSA+KAS+D LV ++ TYG Sbjct: 115 -KYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +S CSNNYGPYHFPEKLIPL I +E + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 174 LLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVRDWLHVYDHCTAIDLI 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IGE YNIGG+NER N+++V ++ L+ KS +LI ++ DRPGHD RYAI Sbjct: 234 IHKGNIGEIYNIGGHNERSNLEVV----KIILNLLGKS---EDLISYVNDRPGHDLRYAI 286 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI++E+GW + + + G+ +TV WY++N WW+ + Sbjct: 287 DASKIQNELGWKAKYDFDFGIKETVKWYIENESWWKSV 324 >gi|254823647|ref|ZP_05228648.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL J1-194] gi|254853033|ref|ZP_05242381.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL R2-503] gi|258606381|gb|EEW18989.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL R2-503] gi|293592870|gb|EFG00631.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL J1-194] Length = 328 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 234/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHIFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|225575213|ref|ZP_03783823.1| hypothetical protein RUMHYD_03302 [Blautia hydrogenotrophica DSM 10507] gi|225037584|gb|EEG47830.1| hypothetical protein RUMHYD_03302 [Blautia hydrogenotrophica DSM 10507] Length = 305 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 150/299 (50%), Positives = 206/299 (68%), Gaps = 7/299 (2%) Query: 23 DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAA 82 D +I+++ +DKLTYAGNL +LK+I + ++F++ DICD E I+ +E + D +V+FAA Sbjct: 6 DNEIRIINVDKLTYAGNLENLKDIEGRDNYTFVKADICDSETIQKIFEENEIDRVVHFAA 65 Query: 83 ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDK 142 ESHVDRSI D F+ TN++GT ++L + W + +FL +STDEVYGSLD+ Sbjct: 66 ESHVDRSIKNPDVFVKTNVLGTLVMLNAAKAAWELPDGTFQKDKKFLHVSTDEVYGSLDE 125 Query: 143 --GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPL 200 G F E PY+P SPYSA+KASSD LV ++ TY P ++NCSNNYGPY FPEKLIPL Sbjct: 126 DGGYFYETTPYDPHSPYSASKASSDMLVKSYMDTYKFPANITNCSNNYGPYQFPEKLIPL 185 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 I ++G + +YGDG+NVRDWLYV DH + + +V +KGR+ E YNIGG+NE++NI I+ Sbjct: 186 IINNALQGKKLPVYGDGKNVRDWLYVMDHAKGIDMVQEKGRLFETYNIGGHNEKQNIQII 245 Query: 261 FEIGFLLDALIP-----KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 I L ++P K+ +LI ++EDR GHDRRYAI KIK+EIGW+P+ E Sbjct: 246 HIILDTLQEMLPEGDPRKALVSEDLITYVEDRKGHDRRYAIAPDKIKAEIGWYPETKFE 304 >gi|329957820|ref|ZP_08298295.1| dTDP-glucose 4,6-dehydratase [Bacteroides clarus YIT 12056] gi|328522697|gb|EGF49806.1| dTDP-glucose 4,6-dehydratase [Bacteroides clarus YIT 12056] Length = 379 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 228/356 (64%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ K+I F F++ DICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHDDIRVVILDALTYAGNLGTVAKDIDDERCF-FVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RILADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D +V+A+ TY Sbjct: 124 SGYPTWRNGVRYHQVSTDEVYGSLGAEGFFTENTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV-FEIGFL--------------------LDALIPKS 274 V++KG GE YN+GG+NE+ N++IV I + D I S Sbjct: 244 VVRKGVEGEVYNVGGHNEKTNLEIVKLTIATIRRLMEEEPKYRAVLKKQVKDADGQIDIS 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + ELI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEELITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQDW 359 >gi|15077647|gb|AAK83290.1|AF355468_1 DTDP-glucose 4,6-dehydratase [Saccharopolyspora spinosa] Length = 329 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 215/339 (63%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ V+V+DKLTYAGN +L ++ + F+ Sbjct: 1 MRILVTGGAGFIGSHYVRQLLGGAYPAFADADVVVLDKLTYAGNEANLAPVADNPRLKFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICDRE + + D +V+FAAE+HVDRSI G+D F+ TN++GT +LL+ Sbjct: 61 CGDICDRELVGGLMSGV--DVVVHFAAETHVDRSITGSDAFVITNVVGTNVLLQAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + +F+ +STDEVYGS++ G + ED P+SPYSA KA SD L A+ T+ Sbjct: 116 ------DAEIGKFVHVSTDEVYGSIEDGSWPEDHALEPNSPYSAAKAGSDLLARAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEK++PL IT +++GS V LYGDG NVRDWL+V DH R + L Sbjct: 170 GLPVCITRCSNNYGPYQFPEKVLPLFITNLMDGSQVPLYGDGLNVRDWLHVSDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V GR GE YNIGG E N + L + L+ + ++R + DR GHDRRY+ Sbjct: 230 VADSGRAGEIYNIGGGTELTNNE-------LTERLLAELGLDWSVVRPVTDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI E+G+ PQ + E+GL +T+ WY DN WW PL Sbjct: 283 VDHSKIVEELGYAPQVDFETGLRETIRWYQDNRDWWEPL 321 >gi|126178137|ref|YP_001046102.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] gi|125860931|gb|ABN56120.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] Length = 320 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 224/337 (66%), Gaps = 18/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGG GFIGS R ++ + +V +DK+TYAGN +LK+I+ ++F++ DI Sbjct: 1 MRILVTGGLGFIGSNFIRQMLEEHPGDSIVNLDKITYAGNPENLKDIAGDPRYTFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + S +E DA+V+FAAESHVDRSI A F+ TN++GT +LLE + LS Sbjct: 61 CDPGVVGSVFREHPIDAVVHFAAESHVDRSIEDASVFVRTNVLGTHVLLE------AALS 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ +STDEVYGS+ G F E NPSSPYSA+KA+SD L ++ T+ +PV Sbjct: 115 HGVG---RFIHVSTDEVYGSIKSGSFRETDNLNPSSPYSASKAASDLLARSYYITHNLPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C+NN+GPY +PEKLIPL T ++EG V +YG G+NVRDW++V DH RA+ VL+ Sbjct: 172 IVTRCTNNFGPYQYPEKLIPLFATNLLEGKKVPVYGTGKNVRDWIHVADHCRAVDFVLRH 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG+NE+ N++I + ++ ++ ++ DR GHD RY++DSS Sbjct: 232 GEPGEVYNIGGDNEKSNLEIT-------EGILRAVGKDESMVEYVPDRLGHDWRYSLDSS 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K+++ +GW P+ + E+ L TV WY +N WWWRPL + Sbjct: 285 KLRA-MGWKPEFDFETALRATVQWYTENEWWWRPLKR 320 >gi|261349836|ref|ZP_05975253.1| dTDP-glucose 4,6-dehydratase [Methanobrevibacter smithii DSM 2374] gi|288860620|gb|EFC92918.1| dTDP-glucose 4,6-dehydratase [Methanobrevibacter smithii DSM 2374] Length = 334 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 156/331 (47%), Positives = 226/331 (68%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS +Y+++ + +D LTY GNL +LK+I + ++F++ DI Sbjct: 3 KILITGGAGFIGSNFVKYMIDKYPDYEFTNLDALTYCGNLENLKDIEDKDNYAFVKGDIR 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + +K+ D ++NFAAESHVDRSI + FI +N++GT +LL + + Sbjct: 63 DKEVVNKLVKD--SDYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVE--- 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++QISTDEVYG+L + G F+E P P+SPYSA+KAS+D +V A+ T+ +PV Sbjct: 118 ------KYVQISTDEVYGTLGETGYFTETTPLQPNSPYSASKASADLVVRAYYETFNLPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I+ +E + +YGDG+N+RDWL+V DH A+ LVL Sbjct: 172 NITRCSNNYGPYQFPEKLIPLMISNALEDKKLPIYGDGKNIRDWLHVHDHCTAIDLVLHD 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YNIGG+NER+NI IV +L+AL + LI F++DR GHDRRYAIDS+ Sbjct: 232 GKLGEVYNIGGHNERQNIQIV---KLILEALG----KYESLIEFVDDRLGHDRRYAIDST 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ +GW P+ E+G+ +T+ WYLDN W Sbjct: 285 KIRENLGWEPKYTFETGIKETIQWYLDNPDW 315 >gi|153007280|ref|YP_001381605.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152030853|gb|ABS28621.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 336 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 220/333 (66%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGG+GFIG+ L R L V +V+ +D LTYAGN +L E+ + F++ DI Sbjct: 1 MNVLVTGGSGFIGANLVRLLLVERPGWRVVNLDALTYAGNAENLAELDGHARYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C+ E + L+ + DA+++ AAESHVDRSIL FI TN+ GT +LLE R Sbjct: 61 CNGELVADVLETERIDAVLHLAAESHVDRSILSPPVFIETNVRGTQVLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ +STDEVYGSL GLF+E+ P +PSSPYSA+KASSD L LA+ T+ +P Sbjct: 114 --ELGVRRFVHVSTDEVYGSLGPSGLFTEETPLDPSSPYSASKASSDLLALAYARTFELP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY FPEKLIPLAI + + +YGDG +VRDW++VEDH R L L+ Sbjct: 172 VVVTRCSNNYGPYQFPEKLIPLAIANALRDLPLPVYGDGLHVRDWIHVEDHCRGLLAALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG G+ YN+G ++ER N+D+V ++ L+ P+S LI+ + DRPGHDRRYAIDS Sbjct: 232 KGESGQVYNLGASSERHNLDVVKQVLRLVGK--PES-----LIQHVADRPGHDRRYAIDS 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K ++ +GW P+ E L TV WY++ WW Sbjct: 285 TKARTVLGWAPRHRFEEALAATVRWYVERRPWW 317 >gi|237751036|ref|ZP_04581516.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter bilis ATCC 43879] gi|229373481|gb|EEO23872.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter bilis ATCC 43879] Length = 338 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 218/331 (65%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y + ++ +D LTYAG+L +LK + + ++F+Q DICD Sbjct: 4 ILITGGAGFIGSNFVLYFLKKYPNYHIVNLDLLTYAGSLENLKGVENFSNYTFMQGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 + +++ +++++FAAESHVD SI + FI TN+ GTF LL L W + Sbjct: 64 ESLVNEIFTKYEIESVIHFAAESHVDNSIANPNAFIKTNVNGTFNLLHTAYLHWFEAPHI 123 Query: 119 SQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ K+ F ISTDEV+GSL + G F+E PY P+SPYSA+KASSD LV ++ HTYG+ Sbjct: 124 AKRGKENCVFHHISTDEVFGSLGESGYFTESTPYAPNSPYSASKASSDMLVRSYIHTYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++NCSNNYGP EKLIP I ++G + +YGDG+NVRDWLYVEDH RA+ +V Sbjct: 184 KAFITNCSNNYGPKQHDEKLIPTIIRNALQGETIPIYGDGKNVRDWLYVEDHCRAIDVVF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 GE +N+GGN ER NI+I I LLD + P++ S+ I F++DR GHDRRYA Sbjct: 244 HSQCYGETFNVGGNCERVNIEIAKHICALLDEIAPRADKKSYQSQIAFVQDRAGHDRRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 IDSSKI +GW PQE+ SGL KT+ +Y++ Sbjct: 304 IDSSKIAKILGWKPQESFASGLEKTLRYYVE 334 >gi|261415187|ref|YP_003248870.1| dTDP-glucose 4,6-dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371643|gb|ACX74388.1| dTDP-glucose 4,6-dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326058|gb|ADL25259.1| dTDP-glucose 4,6-dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 379 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 219/355 (61%), Gaps = 28/355 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK++ + F+++DICD Sbjct: 5 IVITGGAGFIGSHVVRLFVNKYPEYNIINLDKLTYAGNLANLKDVEGKPNYKFVKMDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ + D I++ AAESHVDRSI F TN++GT LL+ +L+W L + Sbjct: 65 FDAFYKLMQDEKVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKLYWESLPE- 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG-------------------------LFSEDMPYNPSSP 156 K + RF ISTDEVYG+L F E Y P SP Sbjct: 124 KYEGKRFYHISTDEVYGALKMNHPEGITPPFTTTASSSEHHLAYGDDFFYETTKYTPHSP 183 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 YSA+KA SD+ V A+ TYG+P +++NCSNNYGPY FPEKLIPL I + + +YG Sbjct: 184 YSASKAGSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHKKPLPVYGK 243 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G+NVRDWL+VEDH RA+ ++ G+I E YNIGG NE KNIDI+ + +D L+ ++ Sbjct: 244 GENVRDWLFVEDHARAIDVIFHNGKIAETYNIGGFNEWKNIDIIKVVIKTVDKLLGRAEG 303 Query: 277 HT-ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 LI ++ DR GHD RYAIDS+K++ E+GW P E G+ KTV WYLDN W Sbjct: 304 EDLNLITYVTDRLGHDARYAIDSTKLQKELGWEPSLQFEEGIEKTVRWYLDNQEW 358 >gi|222445612|ref|ZP_03608127.1| hypothetical protein METSMIALI_01252 [Methanobrevibacter smithii DSM 2375] gi|222435177|gb|EEE42342.1| hypothetical protein METSMIALI_01252 [Methanobrevibacter smithii DSM 2375] Length = 334 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 226/331 (68%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS +Y+V+ + +D LTY GNL +LK+I + ++F++ DI Sbjct: 3 KILITGGAGFIGSNFVKYMVDKYPDYEFTNLDALTYCGNLENLKDIEDKDNYTFVKGDIG 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + + +K+ D ++NFAAESHVDRSI + FI +N++GT +LL + + Sbjct: 63 DKEVVNNLVKD--SDYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVE--- 117 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +++QISTDEVYG+L + G F+E P P+SPYSA+KAS+D +V A+ T+ +PV Sbjct: 118 ------KYVQISTDEVYGTLGETGYFTETTPLQPNSPYSASKASADLVVRAYYETFNLPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I+ +E + +YGDG+N+RDWL+V DH A+ LVL Sbjct: 172 NITRCSNNYGPYQFPEKLIPLMISNALEDKKLPIYGDGKNIRDWLHVYDHCTAIDLVLHD 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YNIGG+NER+NI IV +L+AL LI F++DR GHDRRYAIDS+ Sbjct: 232 GKLGEVYNIGGHNERQNIQIV---KLILEALGKDE----SLIEFVDDRLGHDRRYAIDST 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ +GW P+ E+G+ +T+ WYLDN W Sbjct: 285 KIRENLGWEPKYTFETGIKETIQWYLDNPDW 315 >gi|187932100|ref|YP_001892085.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. mediasiatica FSC147] gi|187713009|gb|ACD31306.1| dTDP-glucose 4,6-dehydratase [Francisella tularensis subsp. mediasiatica FSC147] Length = 349 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 156/327 (47%), Positives = 223/327 (68%), Gaps = 4/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEIS-QSNLFSFLQVDIC 60 ++VTG AGFIGS R +++ I+++ DKLTYAG+L++LK+++ + + +F++ DIC Sbjct: 23 ILVTGAAGFIGSNYVRMMLSRYSDIKIISYDKLTYAGSLDNLKDLNNEQHNHTFIKGDIC 82 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + LKE++ D IV+FAAESHVD SI F+ TN+IGTF LL+ + +W Sbjct: 83 DEVLVYQTLKEYKIDTIVHFAAESHVDNSIANPKVFLETNVIGTFTLLDCAKRYWLDELG 142 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ RF +STDEVYG+L D+ F+E Y P+SPYSA+KA SD++ A+ HTY +P Sbjct: 143 LEETSCRFHHVSTDEVYGTLAKDEPAFTEIKAYEPNSPYSASKAGSDHIARAYHHTYKLP 202 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V +SNCSNNYGPY EKLIP+ I I + +YGDG N+RDWLYVEDH A+ +++ Sbjct: 203 VTISNCSNNYGPYQHREKLIPVVINSCINYKPIPVYGDGSNIRDWLYVEDHCDAIQTIVE 262 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGG NE N+ +V I L+D P++ H+ LI F+EDR GHD RYAID+ Sbjct: 263 KGVVGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSNLITFVEDRKGHDWRYAIDN 322 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI++E+GW P ++ + +T+ +YL Sbjct: 323 SKIQNELGWKPSQDFDKMFRQTIEFYL 349 >gi|255011139|ref|ZP_05283265.1| putative dTDP-glucose 4,6-dehydratase [Bacteroides fragilis 3_1_12] gi|313148949|ref|ZP_07811142.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis 3_1_12] gi|313137716|gb|EFR55076.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis 3_1_12] Length = 379 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 226/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHSDIKVVVLDALTYAGNLGTIANDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W +D+ Sbjct: 65 ELADRLFGEYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAW-VTGKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL +G F E P P SPYSA+K S+D +V+A+ TY Sbjct: 124 YGYPTWRKGVRYHQVSTDEVYGSLGAEGYFHETTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V+++GR GE YN+GG+NE+ N++IV I L+ D I Sbjct: 244 VVREGREGEVYNVGGHNEKTNLEIVKLTIATIHRLMSEHPEYREVLKKKEKNADGEISVD 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQEW 359 >gi|323340989|ref|ZP_08081238.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ruminis ATCC 25644] gi|323091651|gb|EFZ34274.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ruminis ATCC 25644] Length = 339 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 173/336 (51%), Positives = 226/336 (67%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +++ +DKLTYAGNL++LK + + F F ++DI Sbjct: 1 MNIIVTGGAGFIGSNFVFHMLKAHPDYRIICVDKLTYAGNLSTLKSVMDNPNFRFCKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE I +E PD +VNFAAESHVDRSI F+ TNI+GT +L++ R Sbjct: 61 CDREAIYKLFEEEHPDMVVNFAAESHVDRSIENPQLFLETNIMGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKASADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG+G NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIINALNDKPLPVYGEGLNVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KG +GE YN+GG+NE +NIDIV I L P+S LI + DR GHDRRYA Sbjct: 232 IIHKGCVGEVYNVGGHNEMRNIDIVKIICEQLGK--PES-----LITHVADRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI E+GW P+ ++G+ KT+ WYLDN WW Sbjct: 285 IDPTKIHDELGWEPETMFKNGIKKTIQWYLDNKDWW 320 >gi|117164650|emb|CAJ88196.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces ambofaciens ATCC 23877] Length = 329 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 221/341 (64%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R V +V+V+DKLTYAGN +L +F+ Sbjct: 1 MRIVVTGGAGFIGSHFVRQAVTGAYTGGTAPEVVVLDKLTYAGNRANLAPAEDYPGLTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD + L D +V+FAAESHVDRSI G++EFI TN++GT +LL+ + Sbjct: 61 RGDICDPALVADVLTGC--DLVVHFAAESHVDRSISGSEEFIRTNVLGTQVLLDASL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + +F+ +STDEVYGS+D+G +SED P P+SPYSA+KASSD LV A+ T+ Sbjct: 116 ------RAEVQKFVHVSTDEVYGSIDEGSWSEDRPLEPNSPYSASKASSDLLVRAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY PEK+IPL +T++++G V LYGDG +VRDWL+V+DH RA+ L Sbjct: 170 GLPVCVTRCSNNYGPYQNPEKMIPLFVTQLLDGRKVPLYGDGGHVRDWLHVDDHCRAIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +KG GE YNIGG E N D L + L+ + ++ + DR GHDRRY+ Sbjct: 230 VAEKGEAGEVYNIGGGTELANRD-------LTERLLRMVGADWSMVENVADRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D +KI +E+G+ P+ + E GL +TV WY WW PL K Sbjct: 283 VDIAKISTELGYRPRVSFEEGLAETVEWYRKQRDWWEPLKK 323 >gi|19704988|ref|NP_602483.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712894|gb|AAL93782.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 399 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 162/379 (42%), Positives = 235/379 (62%), Gaps = 56/379 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ K I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKHKDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 65 KEIERVFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDK------------------------------GLFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPIYREDIKYLQVSTDEVYGSLSKDYDEPIELVIDDEDVKKVIKNRKNLKTYGNNFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 184 EESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G N+RDWLYV+DH + + LVL++ + GE YNIGG NE KNI+IV + Sbjct: 244 EGKKLPVYGKGDNIRDWLYVKDHCKGIDLVLREAKSGEIYNIGGFNEEKNINIV---KLV 300 Query: 267 LDALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 +D L + ++ E LI +++DR GHD RYAI+ S+I ++GW+P+ Sbjct: 301 IDVLKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSRIAKDLGWYPET 360 Query: 312 NMESGLNKTVCWYLDNNWW 330 + E+G+ KTV WYL+N W Sbjct: 361 DFETGIRKTVKWYLENQDW 379 >gi|237714085|ref|ZP_04544566.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D1] gi|262407137|ref|ZP_06083686.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|294647777|ref|ZP_06725331.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294808608|ref|ZP_06767347.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|229445909|gb|EEO51700.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D1] gi|262355840|gb|EEZ04931.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|292636869|gb|EFF55333.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294444179|gb|EFG12907.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] Length = 378 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 161/358 (44%), Positives = 232/358 (64%), Gaps = 34/358 (9%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ + + F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIAKDIDNERCVFIKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + + Sbjct: 63 SRDVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGK 121 Query: 121 DK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 122 DEQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTETTPLCPHSPYSASKTSADMVVMAYHD 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 182 TYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAI 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------------- 274 LV+++G+ GE YN+GG+NE+ N++IV + L+ ++ Sbjct: 242 DLVVREGKDGEVYNVGGHNEKTNLEIVKLTISTIHRLMAENPEYRQVLKKKVKDENGNIS 301 Query: 275 --YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 302 IDWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLTNQAW 359 >gi|310829412|ref|YP_003961769.1| dTDP-glucose 4 [Eubacterium limosum KIST612] gi|308741146|gb|ADO38806.1| dTDP-glucose 4 [Eubacterium limosum KIST612] Length = 368 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 157/349 (44%), Positives = 230/349 (65%), Gaps = 17/349 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS +Y+++ K +++ +D LTYAGNL +L +I + + F++ DI D Sbjct: 4 VLVTGGAGFIGSNFVKYMLDQHKDYKIVNLDLLTYAGNLENLTDIEDNPNYEFVKGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I ++ D +VNFAAESHVDRSI + F+ TN++GT +LL+ + W + Sbjct: 64 RSFIGDLFQKHHFDLVVNFAAESHVDRSIENPEIFVQTNVMGTQVLLDAAKNLWQTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ ++LQ+STDEVYG+L K G+F+E P P+SPYS++KA +D LV A+G+T+ Sbjct: 124 NGYPTYREGVKYLQVSTDEVYGALGKTGMFTETTPIQPNSPYSSSKAGADLLVRAYGNTF 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P+ ++ CSNNYGPY FPEKLIPL I+ ++E ++ +YGDG +RDWL+V+DH + Sbjct: 184 KFPMNITRCSNNYGPYQFPEKLIPLMISNVVELKNLPIYGDGMQIRDWLHVKDHCSGIDT 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYS---------HTELIRFIE 285 VL KGR+GE YNIGGNNE+ NI+IV I + + L Y+ +L +E Sbjct: 244 VLHKGRLGEVYNIGGNNEKANIEIVDLIIANVKEKLSNDQYNGIDTDVSKISDDLKIHVE 303 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 DR GHDRRYAID++KI +E+GW P E G+ +T+ WYL+N W + + Sbjct: 304 DRLGHDRRYAIDNTKITTELGWSPSYTFEQGIVETIDWYLNNQDWLKQV 352 >gi|296452603|ref|ZP_06894297.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP08] gi|296880985|ref|ZP_06904931.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP07] gi|296258564|gb|EFH05465.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP08] gi|296428006|gb|EFH13907.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP07] Length = 327 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 165/338 (48%), Positives = 228/338 (67%), Gaps = 21/338 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS Y++N +V +D LTYAGNL +L EI ++ + F++ DI Sbjct: 3 KILITGGAGFIGSNFVHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDNSNYKFVRGDIS 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + +E + D +VNFAAESHVDRS+ D FI TNIIGT +LL+ + Sbjct: 63 NREQMYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASI-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ QISTDEVYG L D+ F+E P NPSSPYSA+KAS+D LV ++ TYG Sbjct: 115 -KYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +S CSNNYGPYHFPEKLIPL I +E + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 174 LLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVRDWLHVYDHCTAIDLI 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IGE YNIGG+NER N+ +V ++ L+ KS +LI ++ DRPGHD RYAI Sbjct: 234 IHKGNIGEIYNIGGHNERSNLKVV----KIILNLLGKS---EDLISYVNDRPGHDLRYAI 286 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D+SKI++E+GW + + + G+ +TV WY++N WW+ + Sbjct: 287 DASKIQNELGWKAKYDFDFGIKETVKWYIENESWWKSV 324 >gi|254993501|ref|ZP_05275691.1| hypothetical protein LmonocytoFSL_11292 [Listeria monocytogenes FSL J2-064] Length = 328 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 233/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHIFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G + +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGGDLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|331694067|ref|YP_004330306.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] gi|326948756|gb|AEA22453.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] Length = 324 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 161/339 (47%), Positives = 217/339 (64%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R LV V V D LTYAG L +L E++ S + F+ Sbjct: 1 MRVLVTGGAGFIGSNYVRKLVAGAYPAFADADVTVFDLLTYAGTLTNLVEVADSPRYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D + + D +V+FAAESHVDRSI GA +F++TN++GT +LL+ Sbjct: 61 RGDIRDAAAVGDVMAGV--DVVVHFAAESHVDRSITGAGDFVSTNVVGTQVLLQAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ +STDEVYGS+D+G + E P P+SPYSA+KA SD L A+ T+ Sbjct: 116 ------DAGVGRFVHVSTDEVYGSIDEGSWPETHPLEPNSPYSASKAGSDLLARAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGP+ FPEK+IPL ++ +++G V LYGDG NVRDWL+V+DH R + L Sbjct: 170 GLPVCITRCSNNYGPHQFPEKVIPLFVSNLLDGKKVPLYGDGGNVRDWLHVDDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V++KGR GE YNIGG E N ++ LLDA+ + +I+ + DRPGHDRRY+ Sbjct: 230 VVEKGRDGEVYNIGGGTELSNRELTH---LLLDAV----GADESMIQPVADRPGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI E+G+ PQ E GL +TV +Y D WW PL Sbjct: 283 VDWSKIADELGYAPQVPFERGLAETVAFYRDRRDWWEPL 321 >gi|239931309|ref|ZP_04688262.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces ghanaensis ATCC 14672] gi|291439683|ref|ZP_06579073.1| dTDP-glucose 4,6-dehydratase [Streptomyces ghanaensis ATCC 14672] gi|291342578|gb|EFE69534.1| dTDP-glucose 4,6-dehydratase [Streptomyces ghanaensis ATCC 14672] Length = 353 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 218/337 (64%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 R++VTGGAGFIGS R L+ + + V+DKLTYAGN +L E+ F+F+Q Sbjct: 27 TRILVTGGAGFIGSHYVRTLLGPQGPGDVAITVLDKLTYAGNPANLDEVRAHPGFAFVQG 86 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + E D +V+FAAESHVDRSI G EF+ TN++GT L++ Sbjct: 87 DICDPELVGKLMAEH--DQVVHFAAESHVDRSIDGGAEFVRTNVVGTHTLID-------- 136 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F+ ISTDEVYGS+D+G + E P P+SPYS+ KASSD + L++ T+G+ Sbjct: 137 -AAHRAGIETFVHISTDEVYGSIDEGSWPETHPLQPNSPYSSAKASSDLIALSYHRTHGL 195 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYG +HFPEK+IPL +T +++G V LYGDG NVRDWL+++DHV+ + LV Sbjct: 196 DVRVTRCSNNYGHHHFPEKVIPLFVTNLLDGKKVPLYGDGGNVRDWLHIDDHVQGIELVR 255 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ LL+A + E ++EDR GHDRRY++D Sbjct: 256 TKGRAGEVYNIGGGTELSNRELTE---LLLEACGADWETSVE---YVEDRKGHDRRYSVD 309 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI E+G+ P+++ GL +TV WY DN WW PL Sbjct: 310 CTKISEELGYAPRKDFREGLAETVQWYRDNRDWWEPL 346 >gi|298479607|ref|ZP_06997807.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] gi|295084973|emb|CBK66496.1| dTDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens XB1A] gi|298273997|gb|EFI15558.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] Length = 378 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 162/358 (45%), Positives = 231/358 (64%), Gaps = 34/358 (9%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ + + F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIAKDIDNERCVFIKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + + Sbjct: 63 SRDVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGK 121 Query: 121 DK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 122 DEQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTETTPLCPHSPYSASKTSADMVVMAYHD 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 182 TYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAI 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDALIPK------------------- 273 LV+++G+ GE YN+GG+NE+ N++IV I + + K Sbjct: 242 DLVVREGKDGEVYNVGGHNEKTNLEIVKLTISTIHRLMAEKPEYRQVLKKKVKDENGNIS 301 Query: 274 -SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 302 IDWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLANQAW 359 >gi|300765930|ref|ZP_07075903.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N1-017] gi|300513392|gb|EFK40466.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N1-017] Length = 328 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 234/341 (68%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHIFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIY 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI++E+GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 285 KKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 325 >gi|266631097|emb|CBH32097.1| putative TDP-glucose-4,6-dehydratase [Streptomyces albaduncus] Length = 328 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 219/335 (65%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 L+VTGGAGFIGS R L++ I V V+D LTYAGN +L + F+F++ DI Sbjct: 6 LLVTGGAGFIGSHYVRTLLSPEGPGDISVTVLDALTYAGNPANLDPVRAHPGFTFVRGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD +RS + + D IV+FAAESHVDRSI F TN++GT ILL+ + Sbjct: 66 CDAPLVRSLAR--RADQIVHFAAESHVDRSITDPAAFTRTNVMGTQILLD---------A 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+ ISTDEVYGS+D+G + ED P PSSPY+A+KASSD L L+ HT+G+ V Sbjct: 115 ALRAGTRTFVHISTDEVYGSIDEGSWPEDHPLRPSSPYAASKASSDLLALSHHHTHGLDV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYG +HFPEK IPL +TR+++G V LYGDG+NVRDWL+++DHVRA+ LV Sbjct: 175 RVTRCSNNYGHHHFPEKAIPLFVTRLLDGRKVPLYGDGRNVRDWLHIDDHVRAVELVRTS 234 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N L + L+ + + +++ + DRPGHD RY++D + Sbjct: 235 GRPGEVYNIGGGTELTNRQ-------LTERLLAECGAGWDMVEHVADRPGHDLRYSVDWT 287 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI +E+G+ P+++ +GL +TV WY +N WW PL Sbjct: 288 KIHTELGYRPRKDFATGLAETVAWYRENRPWWEPL 322 >gi|313683246|ref|YP_004060984.1| dtdp-glucose 4,6-dehydratase [Sulfuricurvum kujiense DSM 16994] gi|313156106|gb|ADR34784.1| dTDP-glucose 4,6-dehydratase [Sulfuricurvum kujiense DSM 16994] Length = 335 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 159/331 (48%), Positives = 218/331 (65%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y ++ I+++ +D LTYAGNL +L E+ ++ F++ DICD Sbjct: 4 ILVTGCAGFIGSNFVPYFLDKYPDIRLINLDLLTYAGNLENLAEVENNDRHIFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S KE+ +++FAAESHVD SI F+ TN+ GTF L++ W Sbjct: 64 RTLVESLFKEYDIRGVIHFAAESHVDNSIKNPGIFVQTNVNGTFTLIDVAYKQWMEKPFA 123 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + RF ISTDEVYG+L + G FSE+ Y P+SPYSA+KA SD +V ++ HTYG+ Sbjct: 124 FKAGYEGCRFHHISTDEVYGTLGESGYFSEETSYAPNSPYSASKAGSDMIVRSYHHTYGM 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +++NCSNNYGP EKLIP I + + G ++ +YGDG+N+RDWLYV DH + + L Sbjct: 184 DTVITNCSNNYGPKQHSEKLIPTIIRKALAGENIPIYGDGKNIRDWLYVTDHCKGIDLAY 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 +GR GE YNIGG NER N I I LLD + P+S S+ E I ++EDR GHDRRYA Sbjct: 244 HRGRSGEVYNIGGRNERNNNQIAERICTLLDTMRPRSDGKSYKEFITYVEDRAGHDRRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID+SKI++E+GW EN E+G+ KTV W+L+ Sbjct: 304 IDASKIETELGWRADENFETGILKTVEWFLE 334 >gi|32140281|gb|AAP69571.1| putative NDP-glucose 4,6 dehydratase [Streptomyces griseoflavus] Length = 336 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 160/341 (46%), Positives = 223/341 (65%), Gaps = 18/341 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGFIGS R L+ +++ V+DKLTYAGN +L + F +Q D Sbjct: 5 RILVTGGAGFIGSHYVRTLLGPHGPAGVRITVLDKLTYAGNPANLDPVRAHPGFRLVQGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 +CD + + E D IV+FAAESHVDRSILG EF+ TN+ GT +LL+ + L Sbjct: 65 VCDAAVVDRLVAEH--DQIVHFAAESHVDRSILGGAEFVRTNVGGTQVLLD------AAL 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + F+Q+STDEVYGS+ G + E P +PSSPY+A+KA++D + LA T+G+ Sbjct: 117 RHHGRGRGVFVQVSTDEVYGSIPYGSWPETHPLSPSSPYAASKAAADLVALAHHRTHGLD 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYG +HFPEKLIPL ITR++EG V LYGDG NVRDWL+++DHV+ + LV Sbjct: 177 VRVTRCSNNYGHHHFPEKLIPLFITRLLEGRTVPLYGDGLNVRDWLHIDDHVQGIELVRT 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE YNIGG E N ++V LL+A + E + ++ DR GHDRRY++D Sbjct: 237 KGRPGEVYNIGGGTELTNRELV---SLLLEA----CGAGWESVEYVADRKGHDRRYSVDC 289 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +KI E+G+ P+++ +GL +TV WY +N WW PL + + Sbjct: 290 AKITLELGYEPRKDFATGLAETVSWYRENRDWWEPLRQRAE 330 >gi|313115157|ref|ZP_07800642.1| dTDP-glucose 4,6-dehydratase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622523|gb|EFQ05993.1| dTDP-glucose 4,6-dehydratase [Faecalibacterium cf. prausnitzii KLE1255] Length = 354 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 154/330 (46%), Positives = 218/330 (66%), Gaps = 3/330 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIGS Y++ +LV +DKLTYAGNL +LK++ F+Q DICD+ Sbjct: 5 LITGCAGFIGSNFVHYMLKKYPEILLVNLDKLTYAGNLENLKDVEGDPRHVFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQD 121 E + +++ D ++NFAAESHVDRSI + F+ +N++GT LL+ + W+ ++ Sbjct: 65 ELVEGLFQKYDFDYVINFAAESHVDRSIKNPEIFVQSNVMGTVNLLQRAKEAWYDADAKT 124 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ ++LQ+STDEVYG+L G F E P P SPYS++KAS+D V+A+ TYG+PV Sbjct: 125 WKEGKKYLQVSTDEVYGALGADGYFMETTPLCPHSPYSSSKASADMFVMAFHDTYGMPVN 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYVEDH +A+ +V G Sbjct: 185 ITRCSNNYGPYQFPEKLIPLMINNVKHHKQLPVYGDGMQIRDWLYVEDHCKAIDMVANGG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +IGE YN+GG+NER NI IV I L + +LI+ + DR GHDRRY ID +K Sbjct: 245 KIGEVYNVGGHNERPNIFIVKTIINQLHDRLQDEGISEDLIKHVADRLGHDRRYGIDPTK 304 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK+++GW+P+ E G+ T+ WYL++ W Sbjct: 305 IKNDLGWYPETPFEKGIVLTIDWYLNHQEW 334 >gi|182625745|ref|ZP_02953513.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens D str. JGS1721] gi|177909007|gb|EDT71489.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens D str. JGS1721] Length = 349 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 223/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ + I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYEDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + + ELI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITE-ELIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|313159074|gb|EFR58449.1| dTDP-glucose 4,6-dehydratase [Alistipes sp. HGB5] Length = 368 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 162/349 (46%), Positives = 220/349 (63%), Gaps = 25/349 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V +++ +DKLTYAGNL +L++I + ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVTKYPDYRIVNLDKLTYAGNLANLRDIEERPNYTFVRGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R +++ D +++ AAESHVDRSI F TN++GT LLE R W+ Sbjct: 65 FEAMRELFRQYGIDGVIHLAAESHVDRSIRDPFTFARTNVMGTLSLLEAAREHWNGNWAG 124 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------KGLFSEDMPYNPSSPYSATKA 162 K F ISTDEVYG+L+ + F+E+ Y+P SPYSA+KA Sbjct: 125 K----LFYHISTDEVYGALELTRPAGDPAGCESGGGPFGEEFFTEETKYDPHSPYSASKA 180 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 SSD+ V A+ TYG+P L++NCSNNYGPY FPEKLIPL I + + +YG G+NVRD Sbjct: 181 SSDHFVRAYHDTYGMPTLVTNCSNNYGPYQFPEKLIPLFINNIRHRRPLPVYGRGENVRD 240 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LI 281 WLYVEDH RA+ ++ KG++ + YNIGG NE KNID++ I +D L+ +E LI Sbjct: 241 WLYVEDHARAIDVIFHKGKVADTYNIGGFNEWKNIDLIRVIVKTVDRLLGNPEGASEKLI 300 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ DR GHD RYAIDS K+K E+GW P E G+ KTV WYL N W Sbjct: 301 TYVADRAGHDLRYAIDSRKLKDELGWQPSLQFEEGIEKTVRWYLQNQKW 349 >gi|237748594|ref|ZP_04579074.1| dTDP-D-glucose 4,6-dehydratase [Oxalobacter formigenes OXCC13] gi|229379956|gb|EEO30047.1| dTDP-D-glucose 4,6-dehydratase [Oxalobacter formigenes OXCC13] Length = 339 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 215/331 (64%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y ++ +DKLTYAGNL +L+E + F+Q +ICD Sbjct: 4 ILVTGGAGFIGSNFVPYFAEKYPEYFIINLDKLTYAGNLENLRECETMTNYKFVQGNICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++S +++ +++FAAESHVD SI G F+ TN +GTF L+E R W Sbjct: 64 EILVQSLFEKYDIRGVIHFAAESHVDNSIKGPKSFMETNFMGTFNLIENARRHWMEAPNQ 123 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + RF ISTDEVYG+L + G FSE+ PY P+SPYSA+KA SD++V A+ +TYG+ Sbjct: 124 FKSGYESCRFHHISTDEVYGTLGETGYFSEETPYAPNSPYSASKAGSDFIVRAYHYTYGM 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V SNCSNNYGP EKLIP I + + + +YG G NVRDWLYV DH A+ L+ Sbjct: 184 NVTTSNCSNNYGPKQHSEKLIPTIIRKCLAEDPIPVYGKGLNVRDWLYVMDHCCAIDLIF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYA 295 +G+ GE YN+GGNNER N++IV + +LD P S + LI F+ DRPGHD RYA Sbjct: 244 HEGKSGETYNVGGNNERNNLEIVHAVCAILDKYHPCSDGKKYEALISFVTDRPGHDLRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID++K+K+++GW EN ++G+ KT+ WYL+ Sbjct: 304 IDANKLKNDLGWKANENFDTGIVKTIAWYLN 334 >gi|94263406|ref|ZP_01287220.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] gi|93456242|gb|EAT06376.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] Length = 368 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 166/342 (48%), Positives = 226/342 (66%), Gaps = 21/342 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFIG+ + L + + +++V+D L YAG +L QS F+Q I D Sbjct: 16 LLITGGAGFIGTNYVYHRLAANPENRLVVLDALNYAGRRANLATAEQSPGLRFVQGSITD 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+E + D IV+FAAESHVDRSI G D FI TN++GT ILL+ R W LS Sbjct: 76 QPLLEKLLREEEIDTIVHFAAESHVDRSISGPDPFIETNVVGTHILLKAARKAW--LSGS 133 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF ISTDEVYGSL D F E PY P+SPY+A+KA+SD+LV ++ HTYG+ Sbjct: 134 GRPH-RFHHISTDEVYGSLGPDDPPFRETTPYAPNSPYAASKAASDHLVRSYHHTYGLQT 192 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY FPEKLIPL ++ G + +YGDG N+RDWL+V+DH R + L+L + Sbjct: 193 TISNCSNNYGPYQFPEKLIPLVTLNILHGRPLPVYGDGGNIRDWLHVDDHCRGIDLILDR 252 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLD----------ALIPKSYSH-----TELIRFI 284 GRIGE YN+GG+NE N+D+V ++ LLD AL P + + +L+ F+ Sbjct: 253 GRIGEVYNLGGDNEWNNLDLVRQLCRLLDEKFAANPRLVALFPAAPASRGGKAADLLTFV 312 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +DRPGHD RYAID +K + E+G+ P+++ GLNKTV WY+D Sbjct: 313 DDRPGHDHRYAIDFNKSRQELGYRPRQDFIEGLNKTVQWYID 354 >gi|312130045|ref|YP_003997385.1| dtdp-glucose 4,6-dehydratase [Leadbetterella byssophila DSM 17132] gi|311906591|gb|ADQ17032.1| dTDP-glucose 4,6-dehydratase [Leadbetterella byssophila DSM 17132] Length = 351 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 219/333 (65%), Gaps = 9/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V + +++ +DKLTYAGNL +LK+I + F DI D Sbjct: 5 ILITGGAGFIGSHVVRLFVKQYPEYRIVNLDKLTYAGNLENLKDIENEPNYVFEHGDIVD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + +++ D +++ AAESHVDRSI F+ TN+IGT LL + W + + Sbjct: 65 ETFIDNLFQKYAFDGVIHLAAESHVDRSITDPMAFVKTNVIGTCNLLNAAKNSWKGVYEG 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF +STDEVYG L K F E Y+P SPYSA+KASSD+ V A+ +TYG+P+ Sbjct: 125 K----RFYHVSTDEVYGELHDPKEFFVETTKYDPRSPYSASKASSDHFVRAYHNTYGLPI 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP HFPEKLIPL I + + +YG G+NVRDWL+V+DH RA+ L+ K Sbjct: 181 VVSNCSNNYGPNHFPEKLIPLMINNIKNNKPLPVYGKGENVRDWLFVKDHARAIDLIFHK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGGNNE KNID+V + ++D + + ++ LI ++ DR GHD RYAID+ Sbjct: 241 GKNGDTYNIGGNNEWKNIDLVHLLIEIMDKKLGRPEGTSKALITYVTDRAGHDLRYAIDA 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SK+ +E+GW P E GL +TV WY D NW W Sbjct: 301 SKLMNELGWKPSVTFEEGLAQTVDWYFD-NWDW 332 >gi|329667489|gb|AEB93437.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii DPC 6026] Length = 345 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 172/337 (51%), Positives = 227/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +D LTYAGNL++LK++ + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFVFYMLKKHPDYEIICLDSLTYAGNLSTLKDVMDNPNFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +P+ +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 RDREGVYKLFEEEKPNVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G T+ Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGKNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G+ GE YNIGG+NE NIDIV L+ + K YS LI + DR GHDRRYA Sbjct: 232 ILENGKPGEVYNIGGHNEMANIDIV----KLICDYLEKPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + G+ KT+ WYLDN WW Sbjct: 285 IDPEKIHTELGWLPETMFKDGIKKTIQWYLDNKEWWE 321 >gi|313157705|gb|EFR57116.1| dTDP-glucose 4,6-dehydratase [Alistipes sp. HGB5] Length = 369 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 162/349 (46%), Positives = 220/349 (63%), Gaps = 25/349 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V +++ +DKLTYAGNL +L++I + ++F++ DICD Sbjct: 5 ILITGGAGFIGSHVVRLFVTKYPDYRIVNLDKLTYAGNLANLRDIEERPNYTFVRGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R +++ D +++ AAESHVDRSI F TN++GT LLE R W+ Sbjct: 65 FEAMRELFRQYGIDGVIHLAAESHVDRSIRDPFTFARTNVMGTLSLLEAAREHWNGNWAG 124 Query: 122 KKDQFRFLQISTDEVYGSLD-------------------KGLFSEDMPYNPSSPYSATKA 162 K F ISTDEVYG+L+ + F+E+ Y+P SPYSA+KA Sbjct: 125 KL----FYHISTDEVYGALELTRPAGDPAGCESGGGPFGEEFFTEETKYDPHSPYSASKA 180 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 SSD+ V A+ TYG+P L++NCSNNYGPY FPEKLIPL I + + +YG G+NVRD Sbjct: 181 SSDHFVRAYHDTYGMPTLVTNCSNNYGPYQFPEKLIPLFINNIRHRRPLPVYGRGENVRD 240 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LI 281 WLYVEDH RA+ ++ KG++ + YNIGG NE KNID++ I +D L+ +E LI Sbjct: 241 WLYVEDHARAIDVIFHKGKVADTYNIGGFNEWKNIDLIRVIVKTVDRLLGNPEGASEKLI 300 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ DR GHD RYAIDS K+K E+GW P E G+ KTV WYL N W Sbjct: 301 TYVADRAGHDLRYAIDSRKLKDELGWQPSLQFEEGIEKTVRWYLQNQKW 349 >gi|157738042|ref|YP_001490726.1| dTDP-glucose 4,6-dehydratase [Arcobacter butzleri RM4018] gi|157699896|gb|ABV68056.1| dTDP-glucose 4,6-dehydratase [Arcobacter butzleri RM4018] Length = 342 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 218/331 (65%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y + LV +D LTYAGNL +LKE + + F++ DIC+ Sbjct: 8 ILVTGCAGFIGSNFVPYFLEKYPNYNLVNLDLLTYAGNLENLKECENNPRYKFIKGDICN 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + E+ +++FAAESHVD SI F+ TN+ GT+ L++ + +W Sbjct: 68 RELVEFIFSEYDIKGVIHFAAESHVDNSIKNPGVFVQTNVNGTYTLVDVAKKYWMEKPFT 127 Query: 122 KKDQF---RFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K+++ RF ISTDEVYG+L LF+E Y P+SPYSA+KASSD +V A+ T+ Sbjct: 128 YKEEYKDCRFHHISTDEVYGTLSLDPNDLFTEKTSYAPNSPYSASKASSDMIVRAYVETF 187 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I + G+ + +YGDG+N+RDWLYV DH + + L Sbjct: 188 GLNAVITNCSNNYGPKQHDEKLIPTIIRNALLGNPIPIYGDGKNIRDWLYVLDHCKGIDL 247 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V KG+ GE YNIGG NER N+ IV I +LD +PK S+ ELI F+EDR GHDRRYA Sbjct: 248 VYHKGKKGETYNIGGRNERTNLQIVNRICTILDQEVPKESSYKELITFVEDRAGHDRRYA 307 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID++K+++E+GW EN ++G+ KT+ WYL+ Sbjct: 308 IDATKLENELGWKADENFDTGIVKTINWYLN 338 >gi|218128772|ref|ZP_03457576.1| hypothetical protein BACEGG_00344 [Bacteroides eggerthii DSM 20697] gi|317475440|ref|ZP_07934704.1| dTDP-glucose 4,6-dehydratase [Bacteroides eggerthii 1_2_48FAA] gi|217989000|gb|EEC55316.1| hypothetical protein BACEGG_00344 [Bacteroides eggerthii DSM 20697] gi|316908468|gb|EFV30158.1| dTDP-glucose 4,6-dehydratase [Bacteroides eggerthii 1_2_48FAA] Length = 379 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 166/356 (46%), Positives = 229/356 (64%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ K+I + F F++ DICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHDDIKVVILDALTYAGNLGTIAKDIDEERCF-FVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RILADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D +V+A+ TY Sbjct: 124 QGYPTWRKGVRYHQVSTDEVYGSLGAEGFFTENTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 RMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKPLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V++KG GE YN+GG+NE+ N++IV I L+ D I S Sbjct: 244 VVRKGVEGEVYNVGGHNEKTNLEIVKLTIATIRRLMEEKPEYRAVLKKQVKGDDGQIDIS 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +GW+P+ E+G+ KT+ WYL+N W Sbjct: 304 WINEGLITFVKDRLGHDQRYAIDPAKITEALGWYPETKFETGIVKTIEWYLNNQDW 359 >gi|193213368|ref|YP_001999321.1| dTDP-glucose 4,6-dehydratase [Chlorobaculum parvum NCIB 8327] gi|193086845|gb|ACF12121.1| dTDP-glucose 4,6-dehydratase [Chlorobaculum parvum NCIB 8327] Length = 349 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 163/333 (48%), Positives = 217/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R+ +N V +DKLTYAGNL +LK++ + + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRHFLNRYPDYTVTNLDKLTYAGNLANLKDVESNPNYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + E + DA+V+ AAESHVDRSI EF+ N++GT LL R W Sbjct: 61 ADGPFLLDLFNEQRFDAVVHLAAESHVDRSIESPVEFVIANVLGTVNLLNAARATWGG-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K D F +STDEVYGSL G +FSE PY+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 119 --KFDGKLFYHVSTDEVYGSLGSGGMFSETTPYDPHSPYSASKASSDHFVRAFHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG + FPEKLIPL I + + +YG G NVRDWL+V DH RA+ + Sbjct: 177 VVISNCSNNYGSHQFPEKLIPLFINNIRLEKPLPVYGAGLNVRDWLWVVDHARAIDEIFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +G +GE YNIGG+NE NID++ + ++D + + +E LI ++ DR GHD RYAID Sbjct: 237 RGTVGETYNIGGHNEWTNIDLIRLLCRIMDRKLGRDDGSSETLITYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SK++ E+GW P E GL KTV WYLDN W Sbjct: 297 ASKLQRELGWVPSVTFEEGLEKTVDWYLDNQDW 329 >gi|110799263|ref|YP_694937.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens ATCC 13124] gi|110673910|gb|ABG82897.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens ATCC 13124] Length = 349 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 222/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ K I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYKDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + + LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITEN-LIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|160883474|ref|ZP_02064477.1| hypothetical protein BACOVA_01443 [Bacteroides ovatus ATCC 8483] gi|299148100|ref|ZP_07041163.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_23] gi|156111194|gb|EDO12939.1| hypothetical protein BACOVA_01443 [Bacteroides ovatus ATCC 8483] gi|298514283|gb|EFI38169.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_23] Length = 378 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 161/358 (44%), Positives = 232/358 (64%), Gaps = 34/358 (9%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ + + F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIAKDIDNERCVFIKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + + Sbjct: 63 SRDVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGK 121 Query: 121 DK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 122 DEQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEATPLCPHSPYSASKTSADMVVMAYHD 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 182 TYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAI 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------------- 274 LV+++G+ GE YN+GG+NE+ N++IV + L+ ++ Sbjct: 242 DLVVREGQDGEVYNVGGHNEKTNLEIVKLTISTIHRLMAENPEYRQVLKKKVKDENGDIS 301 Query: 275 --YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 302 IEWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLANQAW 359 >gi|255305246|ref|ZP_05349418.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile ATCC 43255] Length = 525 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 225/338 (66%), Gaps = 21/338 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS Y++N +V +D LTYAGNL +L EI ++ + F++ DI Sbjct: 201 KILITGGAGFIGSNFIHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDNSNYKFVKGDIS 260 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + +E + D +VNFAAESHVDRS+ D FI TNIIGT +LL+ + Sbjct: 261 NREQVYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLD---------AS 311 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ QISTDEVYG L D+ F+E NPSSPYSA+KAS+D LV ++ TYG Sbjct: 312 IKYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSSINPSSPYSASKASADLLVSSYYRTYG 371 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +S CSNNYGPYHFPEKLIPL I +E + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 372 LLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVRDWLHVYDHCTAIDLI 431 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IGE YNIGG+NER N+++V I LL ELI ++ DRPGHD RYAI Sbjct: 432 IHKGNIGEIYNIGGHNERSNLEVVKMILNLLG-------KSEELISYVNDRPGHDLRYAI 484 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D++KI++E+GW + + + G+ +TV WY++N WW+ + Sbjct: 485 DATKIENELGWKAKYDFDLGIKETVKWYIENESWWKAV 522 >gi|72132989|gb|AAZ66342.1| RmlB [Listonella anguillarum] Length = 296 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 158/279 (56%), Positives = 205/279 (73%), Gaps = 6/279 (2%) Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+R + QPDAI++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L Sbjct: 1 ICNRSELDRVFYVHQPDAIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSYWNTL 60 Query: 119 SQDKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +KK FRF ISTDEVYG L+ LF+E+ PY+PSSPYSA+KASSD+LV AW TYG Sbjct: 61 ESNKKSAFRFHHISTDEVYGDLEGTDDLFTEETPYSPSSPYSASKASSDHLVRAWLRTYG 120 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P +++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V Sbjct: 121 FPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKV 180 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDR 292 + +G++GE YNIGG+NE+ NI++V + LL+ L+P + + +LI +++DRPGHD Sbjct: 181 VTEGQVGETYNIGGHNEKANIEVVNTLCALLEDLVPNKPANITHYADLITYVKDRPGHDV 240 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 RYAID+SKI+ E+GW P+E ESG+ KTV WYL+N WW Sbjct: 241 RYAIDASKIERELGWKPEETFESGIRKTVEWYLNNREWW 279 >gi|18309601|ref|NP_561535.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens str. 13] gi|110800083|ref|YP_695053.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens ATCC 13124] gi|168211915|ref|ZP_02637540.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens B str. ATCC 3626] gi|18144278|dbj|BAB80325.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens str. 13] gi|110674730|gb|ABG83717.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens ATCC 13124] gi|170710153|gb|EDT22335.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens B str. ATCC 3626] Length = 349 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 222/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ K I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYKDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + + LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITEN-LIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|167764726|ref|ZP_02436847.1| hypothetical protein BACSTE_03116 [Bacteroides stercoris ATCC 43183] gi|167697395|gb|EDS13974.1| hypothetical protein BACSTE_03116 [Bacteroides stercoris ATCC 43183] Length = 379 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 165/356 (46%), Positives = 227/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ K+I F F++ DICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHDDIKVVILDALTYAGNLGTIAKDIDDERCF-FVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RILADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 124 SGYPTWRNGVRYHQVSTDEVYGSLGAEGFFTEKTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG ++ +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKNLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV-FEIGFL--------------------LDALIPKS 274 V++KG GE YN+GG+NE+ N++IV I + D I S Sbjct: 244 VVRKGVEGEVYNVGGHNEKTNLEIVKLTIATIRRLMEEEPKYRAVLKKQVKDADGQIDIS 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEDLITFVKDRLGHDQRYAIDPTKITDALGWYPETKFEVGIVKTIEWYLNNQDW 359 >gi|150025362|ref|YP_001296188.1| dTDP-glucose 4,6-dehydratase [Flavobacterium psychrophilum JIP02/86] gi|149771903|emb|CAL43377.1| dTDP-glucose 4,6-dehydratase [Flavobacterium psychrophilum JIP02/86] Length = 348 Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 160/331 (48%), Positives = 217/331 (65%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R V + + +D LTYAGNL ++K+I + + ++F++ DI D Sbjct: 4 ILITGGAGFIGSHVVRRFVQNYPNYHIYNLDALTYAGNLENIKDIEKESNYTFVKGDIVD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + + +++ AAESHVDRSI F+ TN+IGT LL + W + Sbjct: 64 EHFINELFAKHNFEGVLHLAAESHVDRSIEDPLSFVKTNVIGTMNLLNAAKNIWKENMEG 123 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF ISTDEVYGSL +GLF+E Y+P+SPYSA+KASSD+ V A+G TYG+P + Sbjct: 124 K----RFYHISTDEVYGSLGAEGLFTETTAYDPNSPYSASKASSDHFVRAYGETYGLPYV 179 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGPYHFPEKLIPL I +I + +YGDG RDWL+V+DH A+ LV +G Sbjct: 180 LTNCSNNYGPYHFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLFVKDHAIAIDLVFHEG 239 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH-TELIRFIEDRPGHDRRYAIDSS 299 E YNIGG NE KNID+V + ++D + +S ++LI +++DRPGHD RYAID+S Sbjct: 240 NNHETYNIGGFNEWKNIDLVKLLCKVMDEKLGRSEGESSKLITYVKDRPGHDLRYAIDAS 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI +GW P E GL +T+ WYL N W Sbjct: 300 KINKALGWKPTVTFEEGLEQTIDWYLANTNW 330 >gi|237720251|ref|ZP_04550732.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|293369880|ref|ZP_06616453.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] gi|229450803|gb|EEO56594.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|292635057|gb|EFF53576.1| dTDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] Length = 378 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 161/358 (44%), Positives = 232/358 (64%), Gaps = 34/358 (9%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ + + F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIAKDIDNERCVFIKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + + Sbjct: 63 SRDVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGK 121 Query: 121 DK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 122 DEQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEATPLCPHSPYSASKTSADMVVMAYHD 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 182 TYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAI 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------------- 274 LV+++G+ GE YN+GG+NE+ N++IV + L+ ++ Sbjct: 242 DLVVREGQDGEVYNVGGHNEKTNLEIVKLTISTIHRLMAENPEYRQVLKKKVKDENGDIS 301 Query: 275 --YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 302 IDWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLANQAW 359 >gi|260173928|ref|ZP_05760340.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D2] gi|315922196|ref|ZP_07918436.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696071|gb|EFS32906.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 379 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 161/358 (44%), Positives = 232/358 (64%), Gaps = 34/358 (9%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ + + F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIAKDIDNERCVFIKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + + Sbjct: 63 SRDVVDGLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGK 121 Query: 121 DK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 122 DEQGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEATPLCPHSPYSASKTSADMVVMAYHD 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ Sbjct: 182 TYKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAI 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------------- 274 LV+++G+ GE YN+GG+NE+ N++IV + L+ ++ Sbjct: 242 DLVVREGQDGEVYNVGGHNEKTNLEIVKLTISTIHRLMAENPEYRQVLKKKVKDENGDIS 301 Query: 275 --YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 302 IDWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLANQAW 359 >gi|298373247|ref|ZP_06983236.1| dTDP-glucose 4,6-dehydratase [Bacteroidetes oral taxon 274 str. F0058] gi|298274299|gb|EFI15851.1| dTDP-glucose 4,6-dehydratase [Bacteroidetes oral taxon 274 str. F0058] Length = 352 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 157/332 (47%), Positives = 218/332 (65%), Gaps = 8/332 (2%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +TGGAGFIGS + R + N +++ +D LTYAGNL ++ +I+ + F + DI D Sbjct: 5 IFITGGAGFIGSHVIRRFATNYPDYKIINLDTLTYAGNLENIDDIASQPNYKFEKADISD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I ++PD +++ AAESHVDRSI F+ TN++GT LL + W +D Sbjct: 65 FKAIERLFDLYKPDGVIHLAAESHVDRSITDPFVFVRTNVLGTCNLLYCAKELW----RD 120 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF +STDEVYG+L D F+E+ Y P SPYSA+KASSD+ V A+ TYG+PV Sbjct: 121 NPEGKRFYHVSTDEVYGALEFDGTFFTEETKYAPHSPYSASKASSDHFVRAFHDTYGLPV 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG +HFPEKLIPLAI + + +YG G+NVRDWL+VEDH A+ ++ + Sbjct: 181 VISNCSNNYGSHHFPEKLIPLAINNIKNNKPIPVYGKGENVRDWLFVEDHAAAIDIIFHR 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+ G+ YNIGGNNE KNID++ + ++D + + ++ LI F+ DR GHD RYAIDS Sbjct: 241 GKNGDTYNIGGNNEWKNIDLIRLLCDIMDRKLGRPQGESQKLITFVADRAGHDLRYAIDS 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SK++ E+GW P E GL KTV WYL N W Sbjct: 301 SKLQRELGWAPSLTFEEGLEKTVDWYLANEKW 332 >gi|189468549|ref|ZP_03017334.1| hypothetical protein BACINT_04952 [Bacteroides intestinalis DSM 17393] gi|189436813|gb|EDV05798.1| hypothetical protein BACINT_04952 [Bacteroides intestinalis DSM 17393] Length = 379 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 165/356 (46%), Positives = 226/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y L +Q++++D LTYAGNL ++ K+I F F++ DICD Sbjct: 5 LVTGAAGFIGANYIKYILAKHDDVQLVILDALTYAGNLGTIAKDIDDERCF-FVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R +F+ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 64 RILADELFAKFKFDYVVNFAAESHVDRSIENPQLFLVTNILGTQNLLDAARRAWVTGKDE 123 Query: 122 K-----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 124 NGYPTWRKGVRYHQVSTDEVYGSLGADGYFTEQTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V+++G GE YN+GG+NE+ N++IV I L+ D I S Sbjct: 244 VVREGVEGEVYNVGGHNEKTNLEIVKLTIATIHRLMTEKPEYREVLKKKTKDEDGQIDIS 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEDLITFVKDRLGHDQRYAIDPAKITAALGWYPETKFEDGIVKTIEWYLNNQAW 359 >gi|313676580|ref|YP_004054576.1| dtdp-glucose 4,6-dehydratase [Marivirga tractuosa DSM 4126] gi|312943278|gb|ADR22468.1| dTDP-glucose 4,6-dehydratase [Marivirga tractuosa DSM 4126] Length = 351 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 217/333 (65%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + R VN +++ +D LTYAGNL +LK+I + F + DI D Sbjct: 4 ILVTGGAGFIGSHVVRLFVNQYPDYKIINLDALTYAGNLENLKDIEDKPNYVFEKGDITD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I +++ D +++ AAESHVDRSI EF+ TNI GT LL + W + Sbjct: 64 EAFIFHLFEKYDFDGVIHLAAESHVDRSISNPLEFLKTNIFGTVTLLNAAKDQWKENFEG 123 Query: 122 KKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF +STDEVYGS+D G F+E+ Y+P SPYSA+KA SD+ V A+ +TYG+P++ Sbjct: 124 K----RFYHVSTDEVYGSVDDGGFFTEETSYDPQSPYSASKAGSDHFVRAYANTYGLPIV 179 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP FPEKLIPL I + + +YG G+N+RDWLYV DH A+ LV KG Sbjct: 180 ISNCSNNYGPNQFPEKLIPLFINNIRNNKALPVYGKGENIRDWLYVIDHATAIDLVYHKG 239 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 R E YNIGG NE KNID++ + +D + + +E LI +++DR GHD RYAID++ Sbjct: 240 RNKETYNIGGFNEWKNIDLIKVMCRTMDEKLGREAGTSEKLITYVKDRAGHDLRYAIDAN 299 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KI +E+GW P E G++KT+ WYLDN W + Sbjct: 300 KIMNELGWKPSLQFEEGISKTIDWYLDNEEWLK 332 >gi|42518974|ref|NP_964904.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii NCC 533] gi|41583261|gb|AAS08870.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii NCC 533] Length = 345 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 174/337 (51%), Positives = 226/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +D LTYAGNL++LK++ + F F+++DI Sbjct: 1 MKVIVTGGAGFIGSNFVFYMLKKHPDYEIICLDSLTYAGNLSTLKDVMDNPNFKFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 RDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F ED P + SSPYS++KAS+D LV A+G T+ Sbjct: 114 --KYGIKRFHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I R + + +YGDG+NVRDWLYVEDH +A+ L Sbjct: 172 NLPVTISRCSNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGKNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G+ GE YNIGG+NE NIDIV I LD K YS LI + DR GHDRRYA Sbjct: 232 ILENGKPGEIYNIGGHNEMANIDIVKLICDYLD----KPYS---LIEHVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID KI +E+GW P+ + + KT+ WYLDN WW Sbjct: 285 IDPEKIHNELGWLPETMFKDDIKKTIQWYLDNKDWWE 321 >gi|110639760|ref|YP_679970.1| dTDP-glucose 4,6-dehydratase [Cytophaga hutchinsonii ATCC 33406] gi|110282441|gb|ABG60627.1| dTDP-glucose 4,6-dehydratase [Cytophaga hutchinsonii ATCC 33406] Length = 354 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 158/335 (47%), Positives = 220/335 (65%), Gaps = 6/335 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN ++V +DKLTYAGNL +L +I ++ + F + DI D Sbjct: 7 ILITGGAGFIGSHVVRLFVNSYPDYLIVNLDKLTYAGNLANLTDIEKAPNYVFEKGDISD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I++ K++ D +++ AAESHVDRSI+ EF+ TN+IGT LL + W + + Sbjct: 67 ANYIQTLFKKYNFDGVIHLAAESHVDRSIVAPMEFVVTNVIGTVNLLNAAKDAWKGSNYE 126 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F +STDEVYGSL D F E Y+P SPYSA+KASSD+ V A+ +TY +PV+ Sbjct: 127 GK---LFYHVSTDEVYGSLHDDSFFLETTSYDPQSPYSASKASSDHFVRAYSNTYKLPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 L+NCSNNYGP FPEKL+PL I + + +YG G+N+RDWL+V DH RA+ +V KG Sbjct: 184 LTNCSNNYGPNQFPEKLLPLFINNIQNNKALPVYGKGENIRDWLFVIDHARAIDIVFHKG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + GE YNIGG+NE NID++ + +D + ++ +E LI ++ DR GHD RYAID++ Sbjct: 244 KRGETYNIGGHNEWTNIDLIRLLCKQMDQKLGRAEGTSEKLISYVTDRAGHDFRYAIDAT 303 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KIK E+GW P E GL+ T+ WYL N W + Sbjct: 304 KIKDELGWVPSVTFEQGLSLTIDWYLANKKWMEEI 338 >gi|262383285|ref|ZP_06076421.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_33B] gi|262294183|gb|EEY82115.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_33B] Length = 379 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 222/357 (62%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ ++++ I+++V+D LTYAGNL ++ E F++ DICDR Sbjct: 5 LVTGAAGFIGANFIKHMLAKYDDIKIVVLDLLTYAGNLGTIAEDIDGVRCEFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 ALADQLFEKYNFDYVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARKAWVTGKAET 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPVWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVKAYHETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ V Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGTNVRDWLYVEDHCKAIDTV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + GR+GE YN+GG+NE++NI+IV EIG D I Sbjct: 245 IHHGRVGEVYNVGGHNEKQNIEIVKLTIRTIHQLMTEQPEYRQVLKKKEIG--ADGQISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ E G+ KT+ WYL+N W Sbjct: 303 DWINDSLITFVKDRLGHDQRYAIDPTKITNELGWTPETCFEVGIVKTIRWYLENQKW 359 >gi|330991299|ref|ZP_08315250.1| dTDP-glucose 4-6-dehydratase 1 [Gluconacetobacter sp. SXCC-1] gi|329761318|gb|EGG77811.1| dTDP-glucose 4-6-dehydratase 1 [Gluconacetobacter sp. SXCC-1] Length = 336 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 143/319 (44%), Positives = 207/319 (64%), Gaps = 3/319 (0%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R+L+ + + V+ +D +TYA + +S+ E++ S+ + I D ++ + QPD Sbjct: 1 MVRHLIRNTEHGVINVDCMTYAASPDSVAEVASSDRYLHSSASILDATAMQHLFETHQPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 A+++ AAESHVDRSI G F+ TN++GT+ LLE +W L +++ FRF ISTDE Sbjct: 61 AVMHLAAESHVDRSIDGPGVFMQTNVMGTYTLLEAAHRYWKGLDGNRRKAFRFHHISTDE 120 Query: 136 VYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 V+G L+ G F+E PY+P SPYSA+KA+SD++V AW HTYG+P ++N +NNYG +HF Sbjct: 121 VFGHLELGDPPFTETTPYDPRSPYSASKAASDHIVRAWYHTYGLPTFVTNTTNNYGIWHF 180 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNE 253 PEKLIPL IEG + +YG G+N+RDWL+VEDH AL +++G+ GE Y IG Sbjct: 181 PEKLIPLVTINAIEGKELPVYGRGENIRDWLFVEDHAEALVKAIERGQPGETYAIGARQP 240 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R N+ +V I +LD L+P E LIRF+ DRPGHD RY ID S + + W + + Sbjct: 241 RTNLQVVKTICAVLDELVPDPEGPRERLIRFVTDRPGHDFRYEIDPSHAEQALDWKARHD 300 Query: 313 MESGLNKTVCWYLDNNWWW 331 E+G+ +T+ WYLDN WW Sbjct: 301 FETGIRRTIQWYLDNRAWW 319 >gi|302384838|ref|YP_003820660.1| dTDP-glucose 4,6-dehydratase [Clostridium saccharolyticum WM1] gi|302195466|gb|ADL03037.1| dTDP-glucose 4,6-dehydratase [Clostridium saccharolyticum WM1] Length = 340 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/337 (48%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN Q++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYQIINLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ +PD +VNFAAESHVDRSI + F+ TN++GT LL+ R + Sbjct: 61 ADRSFVFDLFEKEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ T+ Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYQRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLIISRALADEELPVYGTGENVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KG GE YN+GG+NER N+++V I LD P+S LI+F+ DRPGHDRRYA Sbjct: 232 IIHKGIAGEVYNVGGHNERTNLEVVKTILKALDK--PES-----LIKFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID K+++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPKKLETELGWKPKYNFDTGIRQTIQWYLDNEDWWK 321 >gi|301309340|ref|ZP_07215282.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] gi|300832429|gb|EFK63057.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 20_3] Length = 379 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 222/357 (62%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ ++++ I+++V+D LTYAGNL ++ E F++ DICDR Sbjct: 5 LVTGAAGFIGANFIKHMLAKYDDIKIVVLDLLTYAGNLGTIAENIDGVRCEFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 ALADQLFEKYNFDYVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARKAWVTGKAET 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPVWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVKAYHETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ V Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGTNVRDWLYVEDHCKAIDAV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + GR+GE YN+GG+NE++NI+IV EIG D I Sbjct: 245 IHHGRVGEVYNVGGHNEKQNIEIVKLTIRTIHQLMTEQPEYRQVLKKKEIG--ADGQISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ E G+ KT+ WYL+N W Sbjct: 303 DWINDSLITFVKDRLGHDQRYAIDPTKITNELGWTPETCFEVGIVKTIRWYLENQKW 359 >gi|255099389|ref|ZP_05328366.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-63q42] Length = 327 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 225/338 (66%), Gaps = 21/338 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS Y++N +V +D LTYAGNL +L EI ++ + F++ DI Sbjct: 3 KILITGGAGFIGSNFIHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDNSNYKFVKGDIS 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + +E + D +VNFAAESHVDRS+ D FI TNIIGT +LL+ + Sbjct: 63 NREQVYKLFEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLD---------AS 113 Query: 121 DKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ QISTDEVYG L D+ F+E NPSSPYSA+KAS+D LV ++ TYG Sbjct: 114 IKYGVKRYHQISTDEVYGDLPIDRKDLFFTEQSSINPSSPYSASKASADLLVNSYYRTYG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +S CSNNYGPYHFPEKLIPL I +E + +YG+G+NVRDWL+V DH A+ L+ Sbjct: 174 LLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPVYGNGENVRDWLHVYDHCTAIDLI 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IGE YNIGG+NER N+++V I LL ELI ++ DRPGHD RYAI Sbjct: 234 IHKGNIGEIYNIGGHNERSNLEVVKVILNLLG-------KSEELISYVNDRPGHDLRYAI 286 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D++KI++E+GW + + + G+ +TV WY++N WW+ + Sbjct: 287 DATKIENELGWKAKYDFDLGIKETVKWYIENESWWKAV 324 >gi|6688597|emb|CAB65206.1| RmlB protein [Legionella pneumophila] Length = 351 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 158/327 (48%), Positives = 218/327 (66%), Gaps = 13/327 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTG AGFIGS +++ ND +I+++ +DKLTYAGN +L E+++ F+Q DI Sbjct: 25 LLVTGAAGFIGSNFVKFM-NDKYPEIKIISLDKLTYAGNKANLSEMAECKNHLFVQGDIL 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L+E++ D +V+FAAESHVD SI F+ TN+IGTF LLE R++W Q Sbjct: 84 DKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLNERQ 143 Query: 121 DKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF +STDEVYGSL++ F+E Y P+SPYSA+KASSD++V A+ HTYG+P Sbjct: 144 WDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHIVRAYYHTYGLP 203 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V SNCSNNYGP EKLIP + + + +YG+G N+RDWLYV DH A+ +++ Sbjct: 204 VTTSNCSNNYGPNQHKEKLIPKVVYACVNQLPITVYGNGSNIRDWLYVMDHCEAIDTIIQ 263 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE N+ ++ I ++D L P + +EDR GHD+RYAID+ Sbjct: 264 KGALGEVYNIGGNNELDNLSLIKMICQMMDDLKP--------MEIVEDRKGHDKRYAIDN 315 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SKI+ E+GW PQ + L+ TV YL Sbjct: 316 SKIQKELGWVPQGDFVHKLSNTVHHYL 342 >gi|327400445|ref|YP_004341284.1| dTDP-glucose 4,6-dehydratase [Archaeoglobus veneficus SNP6] gi|327315953|gb|AEA46569.1| dTDP-glucose 4,6-dehydratase [Archaeoglobus veneficus SNP6] Length = 335 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 219/338 (64%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGG GFIGS RY++++ ++V+ +D L Y N N+LK++ + ++F++ DI Sbjct: 3 MKLLVTGGLGFIGSNFIRYILSNYSDVEVINVDALKYGSNPNNLKDVENDDRYTFVKGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + I + +K AIVNFAAE+HVDRSI F+ +N++G F +LE R C Sbjct: 63 SDYDLISNLIKNVY--AIVNFAAETHVDRSISNPYSFLQSNVVGVFTILEAMR---KC-- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + ISTDEVYG + +G F ED PSSPYSA+KA++D VL++ TYG+ Sbjct: 116 ---NPNAKLVHISTDEVYGDILQGSFKEDDTLRPSSPYSASKAAADMFVLSYARTYGLHA 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C+NNYG Y FPEKLIP I R + +YG G+NVRDW+YV DH A+ V++K Sbjct: 173 MITRCTNNYGAYQFPEKLIPKTIIRAAMNMKIPIYGTGKNVRDWIYVLDHCEAINTVMQK 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YNI E+ N+++V I ++ +LI F+EDRPGHD RY++DSS Sbjct: 233 GKKGEIYNISSGEEKTNLEVVTRILSIMG-------KDEDLIEFVEDRPGHDIRYSLDSS 285 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI++E+GW P+ + E G+ +TV WYL+N WWW+PL E Sbjct: 286 KIRNELGWKPKHSFEEGIKETVNWYLENEWWWKPLADE 323 >gi|298376299|ref|ZP_06986255.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_19] gi|298267336|gb|EFI08993.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_1_19] Length = 379 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 222/357 (62%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ ++++ I+++V+D LTYAGNL ++ E F++ DICDR Sbjct: 5 LVTGAAGFIGANFIKHMLAKYDDIKIVVLDLLTYAGNLGTIAEDIDGVRCEFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 ALADQLFEKYNFDYVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARKAWVTGKAET 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPVWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVKAYHETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ V Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGTNVRDWLYVEDHCKAIDAV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + GR+GE YN+GG+NE++NI+IV EIG D I Sbjct: 245 IHHGRVGEVYNVGGHNEKQNIEIVKLTIRTIHQLMTEQPEYRQVLKKKEIG--ADGEISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ E G+ KT+ WYL+N W Sbjct: 303 DWINDNLITFVKDRLGHDQRYAIDPTKITNELGWTPETCFEVGIVKTIRWYLENQKW 359 >gi|241668049|ref|ZP_04755627.1| dTDP-glucose 4,6-dehydratase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876584|ref|ZP_05249294.1| dTDP-D-glucose 4,6-dehydratase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842605|gb|EET21019.1| dTDP-D-glucose 4,6-dehydratase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 333 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/329 (48%), Positives = 216/329 (65%), Gaps = 9/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTG AGFIGS R ++ ND+KI + DKLTYAG+L++LK++ + +F++ DI Sbjct: 8 ILVTGAAGFIGSNYVRMMLSRYNDVKI--VSYDKLTYAGSLDNLKDLENEHNHTFIKGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWWSCL 118 CD + LK + IV+FAAESHVD SI F+ TN+IGTF LL R W L Sbjct: 66 CDEALVYETLKNHNIETIVHFAAESHVDNSIANPKVFLETNVIGTFTLLNCAKRYWLDEL 125 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D+ + +F +STDEVYG+L D F+E Y P+SPYSA+KA SD++ A+ HTY Sbjct: 126 GLDETN-CKFHHVSTDEVYGTLSKDDPAFTETKAYEPNSPYSASKAGSDHIARAYHHTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV +SNCSNNYGPY PEKLIP+ I I + +YGDG N+RDWLYV DH A+ V Sbjct: 185 LPVTISNCSNNYGPYQHPEKLIPVVINSCINQKPIPVYGDGSNIRDWLYVVDHCDAIQTV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG IGE YNIGG NE N+ ++ I L+D P+ H LI F+EDR GHD RYAI Sbjct: 245 VEKGVIGEVYNIGGINEVDNLTLINTICRLMDEYKPEHAPHNRLISFVEDRKGHDWRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D+SKI++++GW P ++ E +T+ +YL Sbjct: 305 DNSKIQNQLGWKPSQDFEKMFKETIEFYL 333 >gi|150008450|ref|YP_001303193.1| dTDP-glucose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] gi|255014200|ref|ZP_05286326.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_7] gi|256841549|ref|ZP_05547056.1| dTDP-glucose 4,6-dehydratase [Parabacteroides sp. D13] gi|149936874|gb|ABR43571.1| dTDP-glucose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] gi|256737392|gb|EEU50719.1| dTDP-glucose 4,6-dehydratase [Parabacteroides sp. D13] Length = 379 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 222/357 (62%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ ++++ I+++V+D LTYAGNL ++ E F++ DICDR Sbjct: 5 LVTGAAGFIGANFIKHMLAKYDDIKIVVLDLLTYAGNLGTIAEDIDGVRCEFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 ALADQLFEKYNFDYVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARKAWVTGKAET 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF Q+STDEVYGSL +G F E P +P SPYSA+K S+D V A+ TY Sbjct: 125 GYPVWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVKAYHETYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ V Sbjct: 185 MPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKSLPVYGDGTNVRDWLYVEDHCKAIDAV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-----------------------FEIGFLLDALIPK 273 + GR+GE YN+GG+NE++NI+IV EIG D I Sbjct: 245 IHHGRVGEVYNVGGHNEKQNIEIVKLTIRTIHQLMTEQPEYRQVLKKKEIG--ADGEISI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F++DR GHD+RYAID +KI +E+GW P+ E G+ KT+ WYL+N W Sbjct: 303 DWINDSLITFVKDRLGHDQRYAIDPTKITNELGWTPETCFEVGIVKTIRWYLENQKW 359 >gi|198275595|ref|ZP_03208126.1| hypothetical protein BACPLE_01760 [Bacteroides plebeius DSM 17135] gi|198271224|gb|EDY95494.1| hypothetical protein BACPLE_01760 [Bacteroides plebeius DSM 17135] Length = 379 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/355 (45%), Positives = 223/355 (62%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ I+++++D LTYAGNL ++ + + F++ +ICDR Sbjct: 5 LVTGAAGFIGANYIKYILGKHDDIKIVILDALTYAGNLETISQDIDNERCFFVKGNICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D IVNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 NLADQLFADYKFDYIVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKGVRFHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADLIVMAYRDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV +S CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ ++ Sbjct: 185 MPVTISRCSNNYGPYHFPEKLIPLIIKNILEGKRLPVYGDGTNVRDWLYVEDHCKAIDMI 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV-FEIGFLL--------------------DALIPKSY 275 + G+ GE YN+GG+NE++NI+IV I + D I + Sbjct: 245 IHNGKDGEIYNVGGHNEKQNIEIVKLTIATIHQIMTEQPEYRNILKKKEMTPDGQISIDW 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + LI F++DR GHD+RYAID +KI E+GW P+ E G+ KT+ WYLDN W Sbjct: 305 INDSLITFVKDRLGHDQRYAIDPTKITRELGWTPETKFEDGIVKTIRWYLDNQKW 359 >gi|317487716|ref|ZP_07946312.1| dTDP-glucose 4,6-dehydratase [Eggerthella sp. 1_3_56FAA] gi|325830500|ref|ZP_08163955.1| dTDP-glucose 4,6-dehydratase [Eggerthella sp. HGA1] gi|316913173|gb|EFV34686.1| dTDP-glucose 4,6-dehydratase [Eggerthella sp. 1_3_56FAA] gi|325487482|gb|EGC89922.1| dTDP-glucose 4,6-dehydratase [Eggerthella sp. HGA1] Length = 339 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 168/338 (49%), Positives = 215/338 (63%), Gaps = 29/338 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+IVTGGAGFIGS ++V N + V+V+D LTYAGNL++L I + + +F+ DIC Sbjct: 9 RIIVTGGAGFIGSNFVHWVVDNQPDVHVVVLDALTYAGNLDNLAGIPEERM-TFVHGDIC 67 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + L+E P DAIV+FAAESH D SI + F+ TN+ GTF LLE R Sbjct: 68 DE----ALLEEIVPGVDAIVHFAAESHNDNSIADPEPFVRTNVHGTFRLLEAAR------ 117 Query: 119 SQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF ISTDEVYG L D F+E+ PY PSSPYS+TKASSD LV AW TY Sbjct: 118 ----KHDVRFHHISTDEVYGDLALDDPARFTEETPYRPSSPYSSTKASSDMLVRAWFRTY 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V +SNCSNNYGP EK IP IT ++ G LYGDG NVRDW++ EDH A++ Sbjct: 174 GVRVTISNCSNNYGPRQHIEKFIPRQITNVLTGIRPKLYGDGLNVRDWIHTEDHSSAVWA 233 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KGR+GE Y IG + E+ NID+ L A++ + +++DRPGHDRRYA Sbjct: 234 ILTKGRLGETYLIGADGEKNNIDV-------LHAILEGMGKSADDFDWVKDRPGHDRRYA 286 Query: 296 IDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 IDSSK++SE+GW P+ + GL T+ WY DN WW+ Sbjct: 287 IDSSKLRSELGWEPKRTDFAEGLKATIAWYRDNPGWWQ 324 >gi|150019563|ref|YP_001311817.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] gi|149906028|gb|ABR36861.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] Length = 339 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 163/337 (48%), Positives = 226/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y++N K +++ +D LTYAGN+ +L + ++ FSF ++DI Sbjct: 1 MKIVVTGGAGFIGGNFVHYMLNKYKDYKIICVDALTYAGNMETLVSVKDNSNFSFYKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + ++ PD IVNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 ADRDAVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIIGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPIDRPDLFFTEETPIHTSSPYSSSKASADLLVGAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 ELPVTISRCSNNYGPYHFPEKLIPLMIANALNNKELPVYGTGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +G++GE YNIGG+NER N+ +V + L + P++ LI+++ DR GHD RYA Sbjct: 232 IIHEGKVGEVYNIGGHNERTNLQVVKTV--LHELGKPET-----LIKYVTDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P + G+ KT+ WYLDN WW Sbjct: 285 IDPAKIHNELGWLPTTTFDEGIKKTIEWYLDNKTWWE 321 >gi|147921182|ref|YP_685007.1| dTDP-glucose 4,6-dehydratase [uncultured methanogenic archaeon RC-I] gi|110620403|emb|CAJ35681.1| dTDP-glucose 4,6-dehydratase [uncultured methanogenic archaeon RC-I] Length = 320 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 217/335 (64%), Gaps = 20/335 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS R+++ I +L +DKLTYAGN ++L+++ + F++ DICD Sbjct: 5 VLVTGGCGFIGSNFIRHMLEKHPNINILNLDKLTYAGNPDNLRDLEDHPCYGFVRGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +K D +V+FAAESHVDRSIL D F+TTN++GT LL+ + L Sbjct: 65 ASIVNNVMKNV--DTVVHFAAESHVDRSILDGDAFVTTNVLGTHTLLK------AALEHK 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ +STDEVYGS+ +G F E PSSPYSA+KA SD L LA+ +TY +PV++ Sbjct: 117 IK---RFIHVSTDEVYGSIMQGSFKETDILEPSSPYSASKAGSDLLALAYHNTYKLPVIV 173 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + C+NNYGPY FPEKLIPL +T +++G V +YG G+N+RDWLYV DH A+ +L+ G Sbjct: 174 TRCTNNYGPYQFPEKLIPLFVTNLMQGKRVPVYGTGKNIRDWLYVLDHCSAIDFILQNGT 233 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YNIGG E+ N++I I LL+ +I ++ DRPGHD RY++D SK+ Sbjct: 234 DGEIYNIGGGEEKTNLEITRMILRLLE-------KDESMIEYVRDRPGHDFRYSLDISKL 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 K +GW P E L TV WY+DN WWW L + Sbjct: 287 K-RLGWSPSYRFEDALEATVKWYVDNRWWWEKLKR 320 >gi|194334560|ref|YP_002016420.1| dTDP-glucose 4,6-dehydratase [Prosthecochloris aestuarii DSM 271] gi|194312378|gb|ACF46773.1| dTDP-glucose 4,6-dehydratase [Prosthecochloris aestuarii DSM 271] Length = 355 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/346 (46%), Positives = 221/346 (63%), Gaps = 15/346 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + R VN + ++ +D LTYAGNL +L+++ + F++ DI D Sbjct: 9 ILVTGGAGFIGSHVVRRFVNAYPEYRITNLDALTYAGNLENLRDVEDRENYRFVKGDITD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + +E D +V+ AAESHVDRSI F+ TN+IGT LL R W+ D Sbjct: 69 GEAMMALFREEAFDGVVHLAAESHVDRSIANPSAFVMTNVIGTVNLLNAARTAWA----D 124 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F ISTDEVYG+L G+F+E+ Y+P SPYSA+KASSD+ V A+ TYG+P + Sbjct: 125 GFEGKLFYHISTDEVYGTLGSDGMFTEETAYDPHSPYSASKASSDHFVRAYHDTYGLPAV 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYG + FPEKLIPL I + + +YG G+N+RDWL+V DH A+ ++ G Sbjct: 185 ISNCSNNYGSFQFPEKLIPLFINNICNNKPLPVYGKGENIRDWLWVVDHASAIDVIYHNG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + GE YNIGGNNE NI ++ + ++D + +S +E LI ++ DR GHD RYAIDSS Sbjct: 245 KQGETYNIGGNNEWTNIALIRLLCGIMDRKLGRSEGESEKLISYVTDRAGHDFRYAIDSS 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW--------WRPLYKE 337 K++ E+GW P E GL KTV WYL N+ W +R YKE Sbjct: 305 KLQQELGWTPSSRFEEGLEKTVDWYLANSEWLERVTSKAYRRYYKE 350 >gi|168214850|ref|ZP_02640475.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens CPE str. F4969] gi|170713683|gb|EDT25865.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens CPE str. F4969] Length = 349 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/329 (48%), Positives = 223/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ + I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYEDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + + +LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITE-DLIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|295397281|ref|ZP_06807376.1| dTDP-glucose 4,6-dehydratase [Aerococcus viridans ATCC 11563] gi|294974487|gb|EFG50219.1| dTDP-glucose 4,6-dehydratase [Aerococcus viridans ATCC 11563] Length = 356 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 164/336 (48%), Positives = 224/336 (66%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS +++ + +++ +D LTYAGNL++L+ + ++ F F++ DI Sbjct: 14 MNVLVTGGAGFIGSNFVFHMLKEHPTYRIICLDALTYAGNLSTLEPVMENPNFRFVKGDI 73 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I +E + D IVNFAAESHVDRSI F+ TNI+GT +L++ +R Sbjct: 74 TDRDLIDKLFEEEKFDFIVNFAAESHVDRSIEDPGIFLKTNILGTQVLMDASR------- 126 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L D+ F+E+ P + SSPYSA+KAS+D LV A+ T+ Sbjct: 127 --KYGVKRFHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSASKASADLLVQAYHRTF 184 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P+ +S CSNNYGPYHFPEKLIPL I R + + +YG G+NVRDWLYVEDH A+ L Sbjct: 185 KLPITISRCSNNYGPYHFPEKLIPLIIARALNDDSLPVYGRGENVRDWLYVEDHCIAIDL 244 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KG+ GE YNIGG+NE+ N+D+V I L + P+S LI F++DR GHD RYA Sbjct: 245 ILHKGKDGEVYNIGGHNEKTNLDVVKTI--LKELGKPES-----LITFVKDRAGHDMRYA 297 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID SK + E+GW P + G+ T+ WYL+N WW Sbjct: 298 IDPSKTRRELGWEPTTLFDEGIKMTIKWYLENRDWW 333 >gi|315636391|ref|ZP_07891637.1| dTDP-glucose 4,6-dehydratase [Arcobacter butzleri JV22] gi|315479304|gb|EFU69991.1| dTDP-glucose 4,6-dehydratase [Arcobacter butzleri JV22] Length = 342 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 156/331 (47%), Positives = 217/331 (65%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y + LV +D LTYAGNL +LKE + + F++ DIC+ Sbjct: 8 ILVTGCAGFIGSNFVPYFLEKYPNYNLVNLDLLTYAGNLENLKECENNPRYKFIKGDICN 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 RE + E+ +++FAAESHVD SI F+ TN+ GT+ L++ + +W Sbjct: 68 RELVEFIFSEYDIKGVIHFAAESHVDNSIKNPGVFVQTNVNGTYTLVDVAKKYWMEKPFT 127 Query: 119 SQDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++K RF ISTDEVYG+L LF+E Y P+SPYSA+KASSD +V A+ T+ Sbjct: 128 YKEKYKNCRFHHISTDEVYGTLSLDPNDLFTEKTSYAPNSPYSASKASSDMIVRAYVETF 187 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I + G+ + +YGDG+N+RDWLYV DH + + L Sbjct: 188 GLNAVITNCSNNYGPKQHDEKLIPTIIRNALLGNPIPIYGDGKNIRDWLYVLDHCKGIDL 247 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V KG+ GE YNIGG NER N+ IV I +LD +PK S+ ELI F+EDR GHD+RYA Sbjct: 248 VYHKGKNGETYNIGGRNERTNLQIVDRICTILDQEVPKESSYKELITFVEDRAGHDKRYA 307 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID++K+++E+GW EN ++G+ KT+ WYL+ Sbjct: 308 IDATKLENELGWKADENFDTGIVKTINWYLN 338 >gi|257468058|ref|ZP_05632154.1| dTDP-glucose 4,6-dehydratase [Fusobacterium ulcerans ATCC 49185] gi|317062344|ref|ZP_07926829.1| dTDP-glucose 4,6-dehydratase [Fusobacterium ulcerans ATCC 49185] gi|313688020|gb|EFS24855.1| dTDP-glucose 4,6-dehydratase [Fusobacterium ulcerans ATCC 49185] Length = 386 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/378 (42%), Positives = 226/378 (59%), Gaps = 54/378 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIG+ +Y++ I+++V+DKLTYAGN+ ++++ S F++ DIC+ Sbjct: 5 LVTGAAGFIGTNFVKYMLEKYGEYIKIVVLDKLTYAGNIENIQKEIDSKKIDFVKGDICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + ++ D +VNFAAESHVDRSI F+ TNI+GT LLE ++ +WS + Sbjct: 65 RELVEDIFSRYEIDYVVNFAAESHVDRSISNPQIFLETNILGTQNLLEVSKKFWSIGKDE 124 Query: 122 K-----KDQFRFLQISTDEVYGSLDK-----------------------------GLFSE 147 K+ +FL ISTDEVYGSL K F+E Sbjct: 125 NGYPVYKEGKKFLHISTDEVYGSLSKDYTEAKELVLNDKVKKVAEGRKNLKTYGDKFFTE 184 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 + P +P SPYSA+K SSD +V A+ TY P+ ++ CSNNYGPY FPEKLIPL I ++E Sbjct: 185 ETPLDPRSPYSASKTSSDMIVRAYAETYKFPMNITRCSNNYGPYQFPEKLIPLIIKNILE 244 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G ++ +YGDG NVRDWLYV+DH +A+ +V+ GR+GE YNIGG NE KNI+IV + Sbjct: 245 GKNLPVYGDGSNVRDWLYVKDHNKAVDMVINNGRLGEVYNIGGFNEEKNINIV---KLTI 301 Query: 268 DALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 D + E LI +++DR GHD RYAID KI +E+GW+P+ + Sbjct: 302 DTIAKIMKEEPEYRRVLKTDVENISYALISYVQDRLGHDARYAIDPEKIVTELGWYPETS 361 Query: 313 MESGLNKTVCWYLDNNWW 330 + G+ +T+ WYL+N W Sbjct: 362 FDKGIEQTIRWYLENQKW 379 >gi|169342355|ref|ZP_02863422.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens C str. JGS1495] gi|169299580|gb|EDS81643.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens C str. JGS1495] Length = 349 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/329 (48%), Positives = 223/329 (67%), Gaps = 4/329 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ + I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYEDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YN+GG+NER NI IV + L + + + +LI+++EDR GHDRRY ID +KI Sbjct: 244 LGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITE-DLIKYVEDRKGHDRRYGIDPTKI 302 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+GW+P+ E G+ KT+ WYLDN W Sbjct: 303 KEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|302346596|ref|YP_003814894.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica ATCC 25845] gi|302150751|gb|ADK97012.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica ATCC 25845] Length = 384 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 166/378 (43%), Positives = 238/378 (62%), Gaps = 36/378 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+V+D LTYAGNL ++K+ + F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYVNEDIKVIVLDALTYAGNLGTIKDDIDNERCIFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE E+ D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRELADKLFAEYDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ K+ R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D+ V+A+ Sbjct: 125 DEQGYPTWKEGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P+ ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPISITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR+GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGRVGEVYNVGGHNEMKNIDIVKLTIKTIHDMMAEDKNLRTILKKQVKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + ELI + DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L++ W + Sbjct: 305 ISWINEELITHVPDRLGHDARYAIDPTKIKNELGWYPETMFADGIVKTIRWNLEHQDWIQ 364 Query: 333 PLYKELKPDNDYSKWKNL 350 + DY K+ ++ Sbjct: 365 EV-----TSGDYQKYYDM 377 >gi|90021758|ref|YP_527585.1| dTDP-glucose 4,6-dehydratase [Saccharophagus degradans 2-40] gi|89951358|gb|ABD81373.1| dTDP-glucose 4,6-dehydratase [Saccharophagus degradans 2-40] Length = 361 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 168/350 (48%), Positives = 226/350 (64%), Gaps = 19/350 (5%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ Y L + +++V+D LTYAGN +L ++ F F++ +IC+ Sbjct: 5 ILVTGGAGFIGANFVHYWLAKYPQAKIVVVDALTYAGNKANLFAAQANSNFVFVRENICN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I LK+++ +AIVNFAAESHVDRSI G D FI TN++GT LL+ + W + Sbjct: 65 TAAIEVLLKKYEINAIVNFAAESHVDRSITGPDLFIETNVVGTHSLLKAAKNVW-LTDGN 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + RF +STDEVYGSL + F E Y PSSPYSA+KA+SD+LV + HTYG+ V Sbjct: 124 NQCEHRFHHVSTDEVYGSLGASQPAFKESSVYAPSSPYSASKAASDHLVRVYHHTYGLNV 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 S+CSNNYGP+ FPEKLIPL I ++ + +YGDG +RDWL V DH + LVL K Sbjct: 184 TTSHCSNNYGPFQFPEKLIPLLILNLLLDKPLPVYGDGLQIRDWLSVNDHCLGIDLVLNK 243 Query: 240 GRIGERYNIGGNNERKNIDIVFEIG------FLLDALIPKSYSHTE---------LIRFI 284 G G+ YN+G NNE NI+IV IG F DA + Y + LI+++ Sbjct: 244 GASGQSYNLGANNEWANINIVKLIGSKLEQMFNADASLAAKYPTAKSVIAGKAHSLIQYV 303 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 EDRPGHDRRYA+D+SK E+G+ PQE ESG+ +T+ WYLDN+ WWR + Sbjct: 304 EDRPGHDRRYAVDASKAMRELGYAPQETFESGIERTLRWYLDNDSWWRSV 353 >gi|258654333|ref|YP_003203489.1| dTDP-glucose 4,6-dehydratase [Nakamurella multipartita DSM 44233] gi|258557558|gb|ACV80500.1| dTDP-glucose 4,6-dehydratase [Nakamurella multipartita DSM 44233] Length = 331 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/343 (46%), Positives = 220/343 (64%), Gaps = 29/343 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R ++ D +V+V+DKLTYAGNL +L + S+ + F+ Sbjct: 1 MRILVTGGAGFIGSTFTRNVLTDQYPGLEGAEVVVLDKLTYAGNLANLAAVEDSDRYEFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETR 112 Q DICD + + + DA+V+FAAESHVDRSILG +F+ TN++GT LL+ ET+ Sbjct: 61 QGDICDPDVVGKLVA--AADAVVHFAAESHVDRSILGGADFVLTNVMGTQTLLQAALETK 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L +F+ +STDEVYGS++ G + E+ P P+SPYSA+KA SD L A+ Sbjct: 119 L------------TKFVHVSTDEVYGSIETGSWDENEPLLPNSPYSASKAGSDLLARAYA 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 T+ +PV ++ CSNNYGPY FPEK+IPL +T +++G V LYG+G+NVRDWL+V+DH R Sbjct: 167 KTHQLPVTITRCSNNYGPYQFPEKVIPLFVTNLMDGQKVPLYGEGRNVRDWLHVDDHCRG 226 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR-PGHD 291 + LVL GR GE YNIGG E N ++ + L A + S E R ++ R GHD Sbjct: 227 IALVLAGGRPGEIYNIGGGTELTNAELTAK----LVAATGRDESFIE--RIVDPRGGGHD 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RY++D KI E+G+ PQ + GL T+ WY DN WW PL Sbjct: 281 LRYSVDHGKISRELGYQPQVPFDQGLADTIAWYRDNRDWWEPL 323 >gi|212224994|ref|YP_002308230.1| rfbB dTDP-glucose 4,6-dehydratase [Thermococcus onnurineus NA1] gi|212009951|gb|ACJ17333.1| rfbB dTDP-glucose 4,6-dehydratase [Thermococcus onnurineus NA1] Length = 333 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 213/338 (63%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGG GFIGS RY++ +V+ +DKL Y N +LK+I + ++F++ DI Sbjct: 1 MRLLVTGGMGFIGSNFIRYILEKHPDWEVINLDKLGYGSNPANLKDIEDNPRYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E ++ +K+ DA+VNFAAESHVDRSI + F+ +N+IG + +LE R Sbjct: 61 ADFELVKELIKKV--DAVVNFAAESHVDRSISSPEHFLKSNVIGVYTILEAIR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R + +STDEVYG + +G F+E PSSPYSATKA+SD LVL W TY + Sbjct: 112 -KENPEVRLVHVSTDEVYGDILEGSFTEKDALMPSSPYSATKAASDVLVLGWTRTYSLNA 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NNYGPY FPEKLIP I R G + +YG GQNVRDWLYVEDHVRA+ VL K Sbjct: 171 SITRCTNNYGPYQFPEKLIPKTIIRASMGLKIPIYGTGQNVRDWLYVEDHVRAIEAVLLK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G E YNI E+ N+++V I L+ LI F+EDRPGHD RY++DS Sbjct: 231 GEPREIYNISAGEEKTNLEVVKTILELMG-------RDESLIEFVEDRPGHDLRYSLDSW 283 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI ++ W + + E G+ KTV WYL+N WWRPL E Sbjct: 284 KITRDLKWRSKHSFEEGIRKTVKWYLENEAWWRPLVNE 321 >gi|255691235|ref|ZP_05414910.1| dTDP-glucose 4,6-dehydratase [Bacteroides finegoldii DSM 17565] gi|260623149|gb|EEX46020.1| dTDP-glucose 4,6-dehydratase [Bacteroides finegoldii DSM 17565] Length = 378 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 163/356 (45%), Positives = 229/356 (64%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ + + F++ DI R Sbjct: 5 LVTGAAGFIGANYIKYILAKHSDIKVVILDALTYAGNLGTIAKDIDNERCVFIKGDIGSR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + +D+ Sbjct: 65 DVVDSLFAEYRFDYVVNFAAESHVDRSIENPQLFLITNILGTQNLLDCARRAW-VMGKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ TY Sbjct: 124 QGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTETTPLCPHSPYSASKTSADLFVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG H+ +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKHLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V+++G+ GE YN+GG+NE+ N++IV I L+ + I Sbjct: 244 VVREGQEGEVYNVGGHNEKTNLEIVKLTISTIHRLMTEHPEYRQVLKKRVKDENGEISID 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + ELI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEELITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQAW 359 >gi|329961606|ref|ZP_08299665.1| dTDP-glucose 4,6-dehydratase [Bacteroides fluxus YIT 12057] gi|328531598|gb|EGF58432.1| dTDP-glucose 4,6-dehydratase [Bacteroides fluxus YIT 12057] Length = 379 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 164/356 (46%), Positives = 225/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+++D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYIKYILAKHSDIRVVILDALTYAGNLGTIANDIDDDRCIFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W +D Sbjct: 65 VLADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAW-VTGKDA 123 Query: 123 ------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 124 SGYPTWRPGVRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V+++G GE YN+GG+NE+ N++IV I L+ D I S Sbjct: 244 VVREGVEGEVYNVGGHNEKTNLEIVKLTISTIRRLMEEEPRYREVLKKKEKGADGQIDIS 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + ELI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEELITFVKDRLGHDQRYAIDPTKITAALGWYPETKFEVGIVKTIVWYLNNQEW 359 >gi|300728522|ref|ZP_07061881.1| dTDP-glucose 4,6-dehydratase [Prevotella bryantii B14] gi|299774240|gb|EFI70873.1| dTDP-glucose 4,6-dehydratase [Prevotella bryantii B14] Length = 394 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 164/370 (44%), Positives = 222/370 (60%), Gaps = 42/370 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN + ++ +DKLTYAGNL +LK+I + F+++DICD Sbjct: 5 IVITGGAGFIGSHVVRLFVNKYPEYHIINLDKLTYAGNLANLKDIENKPNYEFVKMDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ + D I++ AAESHVDRSI F TN++GT LL+ +L+W Sbjct: 65 FDAFYKLMQDKKVDGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAAKLYWESQPTP 124 Query: 122 KKDQF---------------RFLQISTDEVYGSLD------------------------- 141 + + RF ISTDEVYG+L+ Sbjct: 125 YEVRHEVMVNGQCSMVNVPCRFYHISTDEVYGALELTHPEGIEPPFTTTASSSEHHLAYG 184 Query: 142 KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLA 201 F E YNP SPYSA+KASSD+ V A+ TYG+PV+++NCSNNYGPY FPEKLIPL Sbjct: 185 DKFFLETTKYNPHSPYSASKASSDHFVRAFHDTYGMPVVVTNCSNNYGPYQFPEKLIPLF 244 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF 261 I + + +YG G+NVRDWLYVEDH RA+ ++ +G+I + YNIGG NE KNIDI+ Sbjct: 245 INNIRHRKPLPVYGKGENVRDWLYVEDHARAIDVIFHEGKIADTYNIGGFNEWKNIDIIK 304 Query: 262 EIGFLLDALIP-KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 + +D L+ K +LI ++ DR GHD RYAIDSSK++ E+GW P E G+ KT Sbjct: 305 VVIKTVDRLLGRKEGEDMDLITYVTDRAGHDLRYAIDSSKLQKELGWEPSLQFEEGIEKT 364 Query: 321 VCWYLDNNWW 330 V WYLDN W Sbjct: 365 VRWYLDNEEW 374 >gi|94987508|ref|YP_595441.1| dTDP-D-glucose 4,6-dehydratase [Lawsonia intracellularis PHE/MN1-00] gi|94731757|emb|CAJ55120.1| dTDP-D-glucose 4,6-dehydratase [Lawsonia intracellularis PHE/MN1-00] Length = 339 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 170/346 (49%), Positives = 225/346 (65%), Gaps = 24/346 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQV 57 M+L++TGG GFIG+ + + +LK + ++ +D LTYAGN +LKEI ++ + + F+ Sbjct: 1 MQLLITGGCGFIGTNFIQLALKELKDVYIVNLDNLTYAGNPYNLKEIETTKPDQYLFIHG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + ++S L+ + DAI+NFAAESHVDRSI A FITTNI+GT ILL+ R Sbjct: 61 DIGNATLVQSLLQSYSFDAIINFAAESHVDRSITNALPFITTNILGTQILLDAAR----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +F+QISTDEVYGSL G FSE P +P+SPYSA+KAS+D LV A TYG Sbjct: 116 ----AMNVPKFIQISTDEVYGSLGINGKFSEKTPLSPNSPYSASKASADMLVHAAYKTYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +++ CSNNYGPY FPEKLIPL I R + + +YGDG VRDW++VEDH R + LV Sbjct: 172 INTIITRCSNNYGPYQFPEKLIPLMIHRALMDESLPIYGDGLQVRDWIHVEDHCRGILLV 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KGR G YN GG+ E+ N+ +V EI LL+ P S LI ++DRPGHDRRYA+ Sbjct: 232 LEKGRPGNIYNFGGSAEQTNLAVVKEILHLLNK--PNS-----LIHHVKDRPGHDRRYAM 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKEL 338 D SK E+G+ PQ GL TV WYL + W + + YKE Sbjct: 285 DFSKAAKELGYMPQITFNKGLAATVNWYLSHRDWVQNILSGDYKEF 330 >gi|303237344|ref|ZP_07323914.1| dTDP-glucose 4,6-dehydratase [Prevotella disiens FB035-09AN] gi|302482731|gb|EFL45756.1| dTDP-glucose 4,6-dehydratase [Prevotella disiens FB035-09AN] Length = 382 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 170/385 (44%), Positives = 235/385 (61%), Gaps = 38/385 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+++V+D LTYAGNL ++KE F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYVNEDIKIIVLDALTYAGNLGTIKEDIDEKRCVFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E I E D +VNFAAESHVDRSI F+ NI+GT L++ R W Sbjct: 65 RDKELIDKLFAENDIDYLVNFAAESHVDRSIEDPQLFLNVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +K K+ R+ Q+STDEVYGSL +G F+ED P P SPYSA+K S+D V+A+ Sbjct: 125 DEKGYPTWKEGKRYHQVSTDEVYGSLGAEGYFTEDTPLCPHSPYSASKTSADMFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ G + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPISITRCSNNYGPYHFPEKLIPLIINNILAGKPLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR+G+ YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGRVGQVYNVGGHNEMKNIDIVKLTIKTIHDMMADNKELRKVLKKQEKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + +LI + DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L+N W Sbjct: 305 ISWINDDLITHVADRLGHDARYAIDPTKIKNELGWYPETMFAEGIVKTIKWNLENQAWIE 364 Query: 333 PLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 365 EV-----TSGDYQKY--YEEMYGNR 382 >gi|221194432|ref|ZP_03567489.1| dTDP-glucose 4,6-dehydratase [Atopobium rimae ATCC 49626] gi|221185336|gb|EEE17726.1| dTDP-glucose 4,6-dehydratase [Atopobium rimae ATCC 49626] Length = 355 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 207/332 (62%), Gaps = 6/332 (1%) Query: 4 IVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS +YL+ I V+ +D LTYAGNL +L + F QVDI DR Sbjct: 5 LVTGGAGFIGSNFIQYLLRMHEDICVVNVDVLTYAGNLENLSAYEHDSRLVFEQVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ P +VNFAAESHVDRSI F TN++GT LL + W Sbjct: 65 AALARLFEKYAPTYVVNFAAESHVDRSIEDPGAFADTNVMGTVALLSTAKAAWDDGCGGF 124 Query: 123 KDQFRFLQISTDEVYGSLD----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D +LQ+STDEVYGSL + F ED P +P SPYSA+KAS+D V AW TY P Sbjct: 125 GDHI-YLQVSTDEVYGSLPLDDPEAFFREDTPLSPHSPYSASKASADMFVKAWFDTYRFP 183 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++ CSNNYGPY FPEKLIPL I ++ + +YGDG NVRDWLYVEDH +A+ +VL+ Sbjct: 184 AVITRCSNNYGPYQFPEKLIPLMIQNCLDHRKLPVYGDGLNVRDWLYVEDHCKAIDMVLE 243 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+G+ YN+GG+NER N+ IV I + L + LI + DR GHDRRY I Sbjct: 244 RGRLGQVYNVGGHNERNNLYIVKRIISEVSQLTGDPEINESLITHVTDRKGHDRRYGIAP 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ E+ W+P+ E G+ KT+ WYL+N W Sbjct: 304 DKIREELDWYPETPFEEGIVKTITWYLENRTW 335 >gi|91216651|ref|ZP_01253616.1| dTDP-glucose 4,6-dehydratase [Psychroflexus torquis ATCC 700755] gi|91185120|gb|EAS71498.1| dTDP-glucose 4,6-dehydratase [Psychroflexus torquis ATCC 700755] Length = 349 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 219/336 (65%), Gaps = 9/336 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + R VN Q + +D LTYAGNL +LK+I ++F++ DI D Sbjct: 5 ILITGGAGFIGSHVVRLFVNKYPNQNIYNLDSLTYAGNLENLKDIENKENYTFIREDIND 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET-RLWWSCLSQ 120 + I K+++ D +++ AAESHVDRSI F+ TN++GT LL +W S Sbjct: 65 TQKISDLFKKYKFDTVIHLAAESHVDRSISDPVSFVRTNVMGTMNLLNAALEIWKEDFSH 124 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F ISTDEVYG+L + GLF+E Y+P+SPYSA+KASSD+ V A+G TYG+P Sbjct: 125 K-----MFYHISTDEVYGTLGETGLFTETTSYDPNSPYSASKASSDHFVRAYGETYGLPF 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYG FPEKLIPL I ++ + +YGDG RDWLYV DH A+ L+L+K Sbjct: 180 IISNCSNNYGQNQFPEKLIPLFINNILNKKSLPVYGDGNYTRDWLYVIDHALAVDLILEK 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAIDS 298 G++ E YNIGG NE KNI++V + +D + + ELI +++DRPGHD RYAID+ Sbjct: 240 GKVKETYNIGGFNEWKNINLVKLLCQQMDEKLENPVGTSEELITYVKDRPGHDLRYAIDA 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKI E+GW P E GL+ T+ WYL+N W + + Sbjct: 300 SKINKELGWKPTVTFEEGLSITIDWYLENKGWMKKV 335 >gi|160881798|ref|YP_001560766.1| dTDP-glucose 4,6-dehydratase [Clostridium phytofermentans ISDg] gi|160430464|gb|ABX44027.1| dTDP-glucose 4,6-dehydratase [Clostridium phytofermentans ISDg] Length = 341 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 230/338 (68%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS +Y+VN+ +V +D LTYAGNL SLK + + F++ DI Sbjct: 1 MKILVTGGAGFIGSNFVQYMVNNYPEDTIVNLDALTYAGNLESLKSVEDKPNYRFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I ++ D +VNFAAESHVDRSIL + F+ TN++GT +LL+ + Sbjct: 61 SDRVFIMELFEKEAFDVVVNFAAESHVDRSILDPEVFVKTNVLGTLVLLDAS-------- 112 Query: 120 QDKKDQF-RFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 KK Q RF Q+STDEVYG L D+ F+ED P + SSPYS++KAS+D VL++ T Sbjct: 113 --KKFQIKRFHQVSTDEVYGDLPIDRTDLFFTEDTPLHTSSPYSSSKASADLFVLSYYRT 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+PV +S CSNNYGPYHFPEKLIPL I R + + +YG+G NVRDWL+V DH A+ Sbjct: 171 YGLPVTISRCSNNYGPYHFPEKLIPLMIIRALNNEKLPVYGNGSNVRDWLHVTDHCSAID 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L+++ G+ GE YN+GG+NE+ N+++V EI L+ P+S LI ++ DRPGHD RY Sbjct: 231 LIIRNGKPGEVYNVGGHNEKTNLEVVKEILKALNK--PES-----LIEYVTDRPGHDLRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 AID SKI+ E+GW P+ + E+GL +T+ WYL+N WW Sbjct: 284 AIDPSKIEQELGWKPRYHFETGLKQTIDWYLENKDWWE 321 >gi|237742696|ref|ZP_04573177.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 4_1_13] gi|229430344|gb|EEO40556.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 4_1_13] Length = 399 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 163/376 (43%), Positives = 231/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKYGDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E Q D IVNFAAESHVDRSI F+ TNI+GT LL+ + +W+ S+D+ Sbjct: 65 KEIERIFTENQVDYIVNFAAESHVDRSIEDPQIFLETNILGTQNLLDNAKKFWTA-SKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDK------------------------------GLFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGIKYLQVSTDEVYGSLSKDYNEPIELVIDDEAVKKVVKNRKNLKTYGDNFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 184 EESPADPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYQFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KTV WYL+N W Sbjct: 364 TGIRKTVKWYLENQDW 379 >gi|89896062|ref|YP_519549.1| hypothetical protein DSY3316 [Desulfitobacterium hafniense Y51] gi|89335510|dbj|BAE85105.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 337 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 216/337 (64%), Gaps = 23/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y L + ++ +D LTYAGNL +L+ + S F F++ DI Sbjct: 1 MKILVTGGAGFIGSNFIFYELAKHPEDSIICVDLLTYAGNLETLESVMSSPAFKFIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ I + + +PD +VNFAAESHVDRSI F+TTN++G +LL+ R++ Sbjct: 61 ADQQAIYTIFESEKPDIVVNFAAESHVDRSIENPALFLTTNVMGIQVLLDACRIFGIG-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF Q+STDEVYG L D+ LF+E+ + SSPYSA+KAS+D L LA+ T+ Sbjct: 119 -------RFHQVSTDEVYGDLPLDRPDLLFTEETQIHASSPYSASKASADLLTLAYSRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV +S CSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 KVPVSISRCSNNYGPYQFPEKLIPLMIANALNNKPLPVYGKGENVRDWLYVEDHCSAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++ G+ G+ YNIGGNNER N+++V I L I F++DR GHD RYA Sbjct: 232 IIRHGKEGDIYNIGGNNERTNLEVVQTIIHELG---------RGRIEFVKDRAGHDLRYA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID SKI ++GW P + G+ T+ WYLDN WW+ Sbjct: 283 IDPSKIHRDLGWLPSTAFDEGIRMTIRWYLDNKAWWQ 319 >gi|168216434|ref|ZP_02642059.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens NCTC 8239] gi|182381285|gb|EDT78764.1| dTDP-glucose 4,6-dehydratase [Clostridium perfringens NCTC 8239] Length = 349 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 163/330 (49%), Positives = 224/330 (67%), Gaps = 6/330 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ + I+++ +DKLTYAGNL +LK I F+Q DICD+ Sbjct: 5 LVTGGAGFIGSNFVLYMLKKYEDIKIINLDKLTYAGNLENLKSIENDERHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S ++++ D + +FAAESHVDRSI + F TN++GT LL + W + Sbjct: 65 ELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWET-EEGW 123 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +FL +STDEVYGSL + G F E P +P SPYS++KASSD +V A+ TY +PV + Sbjct: 124 KEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMPVNI 183 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ FPEKLIPL I + + +YGDG N+RDWL+VEDH +A+ +V+ GR Sbjct: 184 TRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVINGGR 243 Query: 242 IGERYNIGGNNERKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YN+GG+NER NI IV I +L D + + +LI+++EDR GHDRRY ID +K Sbjct: 244 LGEVYNVGGHNERTNIQIVKIVIEYLHDNVDEEITE--DLIKYVEDRKGHDRRYGIDPTK 301 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK E+GW+P+ E G+ KT+ WYLDN W Sbjct: 302 IKEELGWYPETTFEVGIKKTIKWYLDNKEW 331 >gi|253580787|ref|ZP_04858050.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 5_1_39B_FAA] gi|251847857|gb|EES75824.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 5_1_39BFAA] Length = 342 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 169/340 (49%), Positives = 223/340 (65%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +IVTGGAGFIGS +++ +++ +D LTYAGNL++L + + F F++ I Sbjct: 1 MNIIVTGGAGFIGSNFIFHMLKKYPDYRIICLDCLTYAGNLSTLAPVMDNPNFRFVKESI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E PD +VNFAAESHVDRSI + F+TTNIIGT +L++ R Sbjct: 61 TDREAVYKLFEEEHPDMVVNFAAESHVDRSIENPEVFLTTNIIGTAVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LVLA+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKASADLLVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMIANALNDKPLPVYGTGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 ++ KGR+GE YN+GG+NE NIDIV +I K E LI ++ DR GHD RY Sbjct: 232 IIHKGRVGEVYNVGGHNEMTNIDIV--------KIICKELGKPESLITYVADRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 AID +KI +E+GW P+ G+ KT+ WYLDN WW + Sbjct: 284 AIDPTKIHNELGWLPETKFADGIKKTIKWYLDNKEWWETI 323 >gi|194334528|ref|YP_002016388.1| dTDP-glucose 4,6-dehydratase [Prosthecochloris aestuarii DSM 271] gi|194312346|gb|ACF46741.1| dTDP-glucose 4,6-dehydratase [Prosthecochloris aestuarii DSM 271] Length = 341 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 216/333 (64%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R VN + ++ +D LTYAGNL +L+++ + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRRFVNAYPEYRITNLDALTYAGNLENLRDVEDRENYRFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + +E Q D +++ AAESHVDRSI F+ TN++GT LL R W+ Sbjct: 61 TDGDAMMALFREEQFDGVIHLAAESHVDRSIANPTAFVMTNVLGTVNLLNAARTAWAGAF 120 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K F ISTDEVYG+L G+F+E+ Y+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 121 EGKL----FYHISTDEVYGTLGSAGMFTEETAYDPHSPYSASKASSDHFVRAYHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG FPEKLIPL I + + +YG G+NVRDWL+V DH A+ ++ Sbjct: 177 VVVSNCSNNYGANQFPEKLIPLFINNIRNRKPLPVYGKGENVRDWLWVVDHAEAIDVIFH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGG+NE NID++ + ++D L + ELI ++ DR GHD RYAID Sbjct: 237 SGKHGETYNIGGHNEWTNIDLIRLLCGIMDRKLARREGESAELITYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S K++ E+GW P E GL KTV WYL+N W Sbjct: 297 SGKLQRELGWSPSIRFEEGLEKTVDWYLENGQW 329 >gi|167627479|ref|YP_001677979.1| dTDP-glucose 4,6-dehydratase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597480|gb|ABZ87478.1| dTDP-glucose 4,6-dehydratase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 333 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/329 (48%), Positives = 215/329 (65%), Gaps = 9/329 (2%) Query: 3 LIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTG AGFIGS R ++ ND+KI + DKLTYAG+L +LK++ + +F++ DI Sbjct: 8 ILVTGAAGFIGSNYVRMMLSRYNDVKI--VSYDKLTYAGSLYNLKDLENEHNHTFIKGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWWSCL 118 CD + LK + IV+FAAESHVD SI F+ TN+IGTF LL R W L Sbjct: 66 CDETLVYETLKNHNIETIVHFAAESHVDNSIANPKVFLETNVIGTFTLLNCAKRYWLDEL 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D+ + +F +STDEVYG+L K F+E Y P+SPYSA+KA SD++ A+ HTY Sbjct: 126 GLDETN-CKFHHVSTDEVYGTLSKSDPAFTETKAYEPNSPYSASKAGSDHIARAYHHTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV +SNCSNNYGPY PEKLIP+ I I + +YGDG N+RDWLYV DH A+ V Sbjct: 185 LPVTISNCSNNYGPYQHPEKLIPVVINSCINQKPIPVYGDGSNIRDWLYVVDHCDAIQTV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG IGE YNIGG NE N+ ++ I L+D P+ H LI F+EDR GHD RYAI Sbjct: 245 VEKGVIGEVYNIGGINEVDNLTLINTICKLMDEYKPEHAPHNRLISFVEDRKGHDWRYAI 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D+SKI++++GW P ++ E +T+ +YL Sbjct: 305 DNSKIQNQLGWKPSQDFEKMFKETIEFYL 333 >gi|73667780|ref|YP_303795.1| dTDP-glucose 4,6-dehydratase [Methanosarcina barkeri str. Fusaro] gi|72394942|gb|AAZ69215.1| dTDP-glucose 4,6-dehydratase [Methanosarcina barkeri str. Fusaro] Length = 318 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 221/335 (65%), Gaps = 20/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGG GFIGS Y++ Q++ +DKLTYAGN +LKEI + +SF+Q DI Sbjct: 1 MRLLVTGGCGFIGSNFIHYMLKKYPNYQIVNLDKLTYAGNPANLKEIESNPNYSFVQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + +K+ D +V+FAAESHVDRSI F+ TN++GT LL+ S L+ Sbjct: 61 CDSQVVNEVMKKV--DCVVHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQ------SALA 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K +F+ +STDEVYGS +G F+E NPSSPYS++KA SD L ++ TYG+PV Sbjct: 113 HNIK---KFIHVSTDEVYGSTMEGSFTEKDNLNPSSPYSSSKAGSDLLAKSYYTTYGLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NN+GPY +PEKLIP I+R++EG V +YG G N+RDW+YVEDH A+ VL Sbjct: 170 CITRCTNNFGPYQYPEKLIPFFISRLMEGKKVPVYGTGLNIRDWIYVEDHCSAVDFVLHN 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNI G NE N+ EI L +I K S I ++EDR GHD RY++D S Sbjct: 230 GSNGEIYNIDGGNELTNL----EITHRLLKMIGKDESS---IEYVEDRKGHDFRYSLDGS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ ++GW P+ + +S L +TV WY++N WWW PL Sbjct: 283 KLE-KMGWKPKYDFDSALEQTVKWYVENRWWWEPL 316 >gi|60682962|ref|YP_213106.1| putative dTDP-glucose 4,6-dehydratase [Bacteroides fragilis NCTC 9343] gi|253566095|ref|ZP_04843549.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_2_5] gi|265766846|ref|ZP_06094675.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_16] gi|60494396|emb|CAH09192.1| putative dTDP-glucose 4,6-dehydratase [Bacteroides fragilis NCTC 9343] gi|251945199|gb|EES85637.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 3_2_5] gi|263253223|gb|EEZ24699.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_16] Length = 379 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 165/356 (46%), Positives = 225/356 (63%), Gaps = 30/356 (8%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHSDIKVVVLDALTYAGNLGTIANDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W +D+ Sbjct: 65 ELADRLFGEYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAW-VTGKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R+ Q+STDEVYGSL +G F E P P SPYSA+K S+D +V+A+ TY Sbjct: 124 YGYPTWRKGVRYHQVSTDEVYGSLGAEGYFHETTPLCPHSPYSASKTSADMVVMAYHDTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ L Sbjct: 184 KMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDL 243 Query: 236 VLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKS 274 V+++G GE YN+GG+NE+ N++IV I L+ D I Sbjct: 244 VVREGVEGEVYNVGGHNEKTNLEIVKLTIATIHRLMAEHPEYREVLKKKEKNADGEISID 303 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 304 WINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQEW 359 >gi|188589709|ref|YP_001922379.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] gi|188499990|gb|ACD53126.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] Length = 339 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 225/337 (66%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y++ + +++ +D LTYAGN+ +L+ + + F+F ++DI Sbjct: 1 MKIVVTGGAGFIGGNFVHYMLKKYNEYKIICVDALTYAGNMETLESVKDNKNFNFYKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + ++ PD IVNFAAESHVDRSI + F+ TNI+GT +L++ +C+ Sbjct: 61 ADRETVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIMGTAVLMD------ACI- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGINRYHQVSTDEVYGDLPIDRPDLFFTEETPIHTSSPYSSSKASADLLVGAYNRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLPTTISRCSNNYGPYHFPEKLIPLMIANALNDKELPVYGTGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KG +GE YNIGG+NER N+++V +I + LI+F+ DR GHD RYA Sbjct: 232 IIHKGTVGEVYNIGGHNERTNLEVV-------KTIIHELGKQENLIKFVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P + + G+ KT+ WYL+N WW Sbjct: 285 IDPTKIHNELGWLPTTSFDEGIKKTIKWYLENRTWWE 321 >gi|266620736|ref|ZP_06113671.1| dTDP-glucose 4,6-dehydratase [Clostridium hathewayi DSM 13479] gi|288867637|gb|EFC99935.1| dTDP-glucose 4,6-dehydratase [Clostridium hathewayi DSM 13479] Length = 340 Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 164/337 (48%), Positives = 229/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG ++VN +++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYEIINLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I ++ +PD IVNFAAESHVDRSI + F+ TN++GT LL+ R + Sbjct: 61 ADRKFIFDLFEKEKPDVIVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACREFGIK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D VLA+ T+ Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLFVLAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLIISRALADEELPVYGTGENVRDWLHVADHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KGR GE YN+GG+NER N+++V I LD P+S LI+++ DRPGHDRRYA Sbjct: 232 IIHKGREGEIYNVGGHNERTNLEVVKTILKALDK--PES-----LIKYVSDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID K+++E+GW P+ ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPKKLETELGWKPKYTFDTGIEQTIQWYLDNEDWWK 321 >gi|21227269|ref|NP_633191.1| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1] gi|20905618|gb|AAM30863.1| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1] Length = 321 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 158/335 (47%), Positives = 220/335 (65%), Gaps = 20/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++L+VTGG GFIGS RY++ Q++ +DKLTYAGN +LK+I + +SF++ DI Sbjct: 4 LKLLVTGGCGFIGSNFIRYMLKKYPDYQIVNLDKLTYAGNPANLKDIENNPNYSFVKGDI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + +K D +V+FAAESHVDRSI F+ TN++GT LL+ S L+ Sbjct: 64 CDPVVVNEVIK--TADQVVHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQ------SALA 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +F+ +STDEVYGS +G F+E NPSSPYS++KA SD L +++ TYG+PV Sbjct: 116 NKIK---KFIHVSTDEVYGSTMEGSFTETDKLNPSSPYSSSKAGSDLLAMSYHTTYGLPV 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NN+GPY +PEKLIP I+R++EG V +YG G N+RDW+YVEDH A+ VL K Sbjct: 173 CITRCTNNFGPYQYPEKLIPFFISRLMEGKKVPVYGTGMNIRDWIYVEDHCSAIDFVLHK 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNI G NE N++I LL L S I ++EDR GHD RY++D S Sbjct: 233 GSAGEIYNIDGGNELTNLEITHR---LLKMLGKDESS----IEYVEDRKGHDFRYSLDGS 285 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ ++GW P+ + ++ L KTV WY++N WWW PL Sbjct: 286 KLE-KMGWKPRYDFDTALEKTVSWYVENKWWWEPL 319 >gi|28394168|dbj|BAC57041.1| dTDP-glucose-4,6-dehydratase [Micromonospora griseorubida] Length = 342 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 159/345 (46%), Positives = 216/345 (62%), Gaps = 23/345 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ Q +V+DKLTYAGNL +L ++ +F Sbjct: 1 MRVLVTGGAGFIGSHFVRQLLAGAYQRWHGAQTIVLDKLTYAGNLANLAPVAHHPDLTFT 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D+CDRE + + ++ D +V+FAAESHVDRSI AD F+ TN+ GT LL+ Sbjct: 61 QGDVCDRELVENLMRGV--DLVVHFAAESHVDRSIAAADAFVRTNVQGTHTLLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+++G ++E+ P P+SPY+A+KA SD L LA+ T+ Sbjct: 113 ---AAVRAGVERFVHVSTDEVYGSIEEGSWTEEQPLAPNSPYAASKAGSDLLALAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY +PEKLIPL T +++G V LYGDG+N RDWL+V+DH + L Sbjct: 170 GLPVCVTRCSNNYGPYQYPEKLIPLFTTNLLDGLPVPLYGDGRNQRDWLHVDDHCHGIDL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V G GE Y+IGG E N D+ LLD S +R + DRPGHD RY+ Sbjct: 230 VATGGVPGEVYHIGGGTELSNADLT---AHLLDLCGADELS----VRRVADRPGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +D SKI E+G+ P+ + GL TV WY +N WW PL + P Sbjct: 283 LDISKISRELGYTPRVSFAEGLADTVDWYRNNRAWWEPLKVQPVP 327 >gi|86160704|ref|YP_467489.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777215|gb|ABC84052.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-C] Length = 336 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 158/333 (47%), Positives = 219/333 (65%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGG GFIGS L R L+ + +V+ +DKLTYAGN +L ++ S+ + F++ DI Sbjct: 1 MNVLLTGGCGFIGSNLVRLLLAERPGWRVVNLDKLTYAGNAENLADVKGSSQYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + + + DA+++ AAESHVDRSIL FI TN+ GT +LLE R Sbjct: 61 GNGELVADVFRTERIDAVMHLAAESHVDRSILAPAVFIDTNVRGTQVLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL +STDEVYGSL G F+E P +PSSPYSA+KASSD L LA+ HT+ +P Sbjct: 114 --EHGVKRFLHVSTDEVYGSLGPSGYFTETTPLDPSSPYSASKASSDLLALAYAHTFKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDW++VEDH R L L+ Sbjct: 172 VVVTRCSNNYGPYQFPEKLIPLMIANALRDLPLPVYGDGMNVRDWIHVEDHCRGLLAALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN G ++ER NIDIV ++ L P++ LI +++DR GHDRRYAID+ Sbjct: 232 HGHDGEVYNFGASSERHNIDIVKQV--LRHVGKPET-----LITYVKDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K ++++GW P+ + E+ L TV WY ++ WW Sbjct: 285 TKARAKLGWAPRHHFEAALGDTVRWYREHRAWW 317 >gi|295133944|ref|YP_003584620.1| dTDP-glucose 4,6-dehydratase [Zunongwangia profunda SM-A87] gi|294981959|gb|ADF52424.1| dTDP-glucose 4,6-dehydratase [Zunongwangia profunda SM-A87] Length = 341 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 158/330 (47%), Positives = 216/330 (65%), Gaps = 7/330 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y ++ V++ +D LTYAGN +++KE++ + F+Q +ICD Sbjct: 4 ILVTGGAGFIGSNFIIYYLDHNPDSVIINLDALTYAGNTDNVKEVANHPRYRFIQGNICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I ++ I++ AAESHVD SI D F+ TNI+GTF LL+ + +W Sbjct: 64 RALIERLFYKYDIKDIIHLAAESHVDNSIARPDAFMQTNIMGTFNLLDVAKNYWMDSPGI 123 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K+Q+ RF +STDEVYG+L + GLF E Y P+SPYSA+KASSD++V ++ HTYG+ Sbjct: 124 YKEQYQNSRFHHVSTDEVYGTLGETGLFKETTAYAPNSPYSASKASSDFIVRSYHHTYGM 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP+ I + + G ++ +YG+G+N+RDWLYV DH + + L Sbjct: 184 NVVTTNCSNNYGPKQHDEKLIPVIIRKALAGENIPIYGNGKNIRDWLYVLDHCKGIALAF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 KG G YNIGG NER NI I +I LLD +P S+T I ++ DR GHD RYA Sbjct: 244 HKGVSGNTYNIGGKNERTNIYIAKKICKLLDKKVPLNSGESYTSQISYVTDRAGHDFRYA 303 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID+ KI+ E+GW EN ESG+ TV WYL Sbjct: 304 IDAKKIEKELGWKADENFESGIEITVDWYL 333 >gi|53714996|ref|YP_100988.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis YCH46] gi|52217861|dbj|BAD50454.1| dTDP-glucose 4,6-dehydratase [Bacteroides fragilis YCH46] gi|301164428|emb|CBW23986.1| putative dTDP-glucose 4,6-dehydratase [Bacteroides fragilis 638R] Length = 379 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 164/355 (46%), Positives = 222/355 (62%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y L I+V+V+D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYLKYILAKHSDIKVVVLDALTYAGNLGTIANDIDNERCFFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E E++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 ELADRLFGEYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKDEY 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKGVRYHQVSTDEVYGSLGAEGYFHETTPLCPHSPYSASKTSADMVVMAYHDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKSY 275 +++G GE YN+GG+NE+ N++IV I L+ D I + Sbjct: 245 VREGVEGEVYNVGGHNEKTNLEIVKLTIATIHRLMAEHPEYREVLKKKEKNADGEISIDW 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL N W Sbjct: 305 INEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLSNQEW 359 >gi|237743339|ref|ZP_04573820.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 7_1] gi|229433118|gb|EEO43330.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 7_1] Length = 399 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 160/376 (42%), Positives = 233/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+++D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKYEDIKVIIVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 65 KEIERIFSENKIDCVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKSWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGVKYLQVSTDEVYGSLSKDYNEPIELVIDDEAVKKVVKNRKNLKTYGDKFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 184 EESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKQREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KT+ WYL+N W Sbjct: 364 TGIRKTIKWYLENQDW 379 >gi|294784780|ref|ZP_06750068.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27] gi|294486494|gb|EFG33856.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27] Length = 399 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 161/376 (42%), Positives = 233/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKHEDIKVIVVDSLTYAGNLGTIKEELRDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E Q D +VNFAAESHVDRSI F+ TN++GT LL+ + +W+ +S+D+ Sbjct: 65 KEIERIFSENQIDYVVNFAAESHVDRSIENPQIFLETNVLGTQNLLDNAKKFWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDK------------------------------GLFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGIKYLQVSTDEVYGSLSKDYNEPIELVIDDEAMKKVVKNRKNLKTYGDNFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 184 EESPADPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYQFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KTV WYL+N W Sbjct: 364 TGIRKTVKWYLENQDW 379 >gi|319957145|ref|YP_004168408.1| dtdp-glucose 4,6-dehydratase [Nitratifractor salsuginis DSM 16511] gi|319419549|gb|ADV46659.1| dTDP-glucose 4,6-dehydratase [Nitratifractor salsuginis DSM 16511] Length = 347 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 158/332 (47%), Positives = 220/332 (66%), Gaps = 9/332 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y ++ LV +D LTYAGN +LKE+ + F++ +IC+ Sbjct: 9 ILITGGAGFIGSNFIPYFLDKYPEYNLVNLDLLTYAGNPENLKEVENHPRYKFIRGNICN 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + E+ +++FAAESHVD SI F+ TN+ GT+ LL+ T+ W Sbjct: 69 RELVDFIFNEYDIRGVIHFAAESHVDNSIKNPGVFVETNVNGTYTLLDVTKNHWMEKPFT 128 Query: 122 KKDQF---RFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KD + RF ISTDEVYG+L + LF+E+ PY P+SPYSA+KASSD +V ++ T+ Sbjct: 129 YKDDYQNCRFHHISTDEVYGTLGEDPNELFTEETPYAPNSPYSASKASSDMIVRSYVETF 188 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I ++G+ + +YGDG+N+RDWLYV DH + + L Sbjct: 189 GMNCVITNCSNNYGPKQHDEKLIPTIIRNALQGNPIPIYGDGKNIRDWLYVLDHCKGIDL 248 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRR 293 V G+ GE YNIGG NER N++IV I +LD +P+ S+ +L+ F+EDR GHDRR Sbjct: 249 VYHNGKKGETYNIGGRNERTNLEIVNRICKILDEKVPRKNGESYKKLVTFVEDRAGHDRR 308 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 YAID++KI+SE+ W EN ESG+ KTV WYL Sbjct: 309 YAIDATKIESELSWKADENFESGIIKTVDWYL 340 >gi|315609093|ref|ZP_07884062.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae ATCC 33574] gi|315249163|gb|EFU29183.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae ATCC 33574] Length = 387 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 169/378 (44%), Positives = 228/378 (60%), Gaps = 36/378 (9%) Query: 4 IVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIGS +YL+ D I+V+V+D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGSNYIKYLLYKKYRDEDIKVIVLDALTYAGNLGTIKDDIDDRRCLFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE E D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RDRELADRLFAEHDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ Sbjct: 125 DAQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADLFVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKRLPVYGEGTNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE +NIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMRNIDIVKLTIKTIHDMMAGDKELRKVLKKQVLDDHGDIR 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + LI + DR GHD+RYAID +KIK E+GW+P+ G+ KT+ W LDN W + Sbjct: 305 IDWINDSLITHVADRLGHDQRYAIDPTKIKDELGWYPETKFADGIVKTIKWNLDNQQWIK 364 Query: 333 PLYKELKPDNDYSKWKNL 350 + DY K+ ++ Sbjct: 365 EV-----TSGDYQKYYDM 377 >gi|189500817|ref|YP_001960287.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] gi|189496258|gb|ACE04806.1| dTDP-glucose 4,6-dehydratase [Chlorobium phaeobacteroides BS1] Length = 345 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 219/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + RY V+ + + +DKLTYAGNL +L+++ + + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRYFVDTYPEYSITNLDKLTYAGNLENLRDVEDRSNYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ D +++ AAESHVDRSI F+ TN++GT LL R W Sbjct: 61 TDGAVMLELFEKELFDGVIHLAAESHVDRSIANPTGFVMTNVLGTVNLLNAARALW---- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 QD F +STDEVYG+L +G+F+E+ Y+P SPYSA+KASSD+ V A+ TYG+P Sbjct: 117 QDDYSGKLFYHVSTDEVYGALGGEGMFTEETSYDPHSPYSASKASSDHFVRAYHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP FPEKLIPL I + + +YG G+NVRDWL+V DH RA+ ++ Sbjct: 177 VVISNCSNNYGPCQFPEKLIPLFINNIRNNKPLPVYGKGENVRDWLWVIDHARAIDMIYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 KG+ GE YNIGGNNE NI ++ + ++D + + + +LI + DR GHD RYAID Sbjct: 237 KGKQGETYNIGGNNEWTNIALIRLLCSIMDRKLGRPEGESGKLITCVTDRAGHDFRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SSK++ E+GW P E GL KTV WYL+N+ W Sbjct: 297 SSKLQRELGWTPSLQFEEGLEKTVDWYLENSTW 329 >gi|237737859|ref|ZP_04568340.1| dTDP-glucose 4,6-dehydratase [Fusobacterium mortiferum ATCC 9817] gi|229419739|gb|EEO34786.1| dTDP-glucose 4,6-dehydratase [Fusobacterium mortiferum ATCC 9817] Length = 384 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 163/379 (43%), Positives = 226/379 (59%), Gaps = 56/379 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIG +Y++ IQ++V+DKLTYAGN +SLK+ F++ DI + Sbjct: 5 LVTGAAGFIGVNFVKYMLEKYGKDIQIIVLDKLTYAGNKDSLKDEIAEGKIEFVKGDIGN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + + + D +VNFAAESHVDRSILG F+ TNI+GT LLE ++ W + +D Sbjct: 65 KELVENIFSRYDIDYVVNFAAESHVDRSILGPRVFLETNILGTQNLLEVSKDSW-IIGKD 123 Query: 122 K------KDQFRFLQISTDEVYGSLDKG-----------------------------LFS 146 + K+ +++QISTDEVYGSL + F+ Sbjct: 124 ENGYPIYKEGKKYIQISTDEVYGSLSRDYAEAKELHLDENVKKVVEGRENLKTYGERFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYS++KAS D +V A+ TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 184 EETPLDPRSPYSSSKASGDMIVRAYAETYKLPINITRCSNNYGPYQFPEKLIPLIIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YGDG NVRDWLYV DH +A+ +V+ GR+GE YNIGG NE KNI+IV Sbjct: 244 EGKSLPVYGDGSNVRDWLYVRDHNKAVDMVINSGRLGEVYNIGGFNEEKNINIV---KLT 300 Query: 267 LDALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 +D + E LI +++DR GHD RYAID +KI +E+GW+P+ Sbjct: 301 IDTIAKIMKEEPEYRKVLKTNIENINYSLITYVQDRLGHDARYAIDPTKIATELGWYPET 360 Query: 312 NMESGLNKTVCWYLDNNWW 330 + G+ KT+ WYLDN W Sbjct: 361 PFDKGIEKTIRWYLDNQEW 379 >gi|256830647|ref|YP_003159375.1| dTDP-glucose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256579823|gb|ACU90959.1| dTDP-glucose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 341 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 216/335 (64%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNL---FSFLQ 56 M L+VTGG GFIGS ++++ + V+V +DKLTYAGN +L E +L + F+ Sbjct: 1 MHLLVTGGCGFIGSNFIQHMLASHEDVVIVNLDKLTYAGNRRNLAEEEALHLGRRYHFVH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD+E + +K F DA++NFAAESHVDRSI F+TTN++GT LLE R Sbjct: 61 GDICDQELVPELMKRFVFDAVLNFAAESHVDRSISDPFPFVTTNVLGTQNLLEAAR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ ISTDEVYG+L G F+ED P P+SPYSA+KASSD L A+ HTY Sbjct: 117 -----RAEIPRFVHISTDEVYGTLGPTGQFTEDTPLAPNSPYSASKASSDLLARAYFHTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+++ CSNNYGPY FPEKLIPL + + +YGDGQNVRDW+YV DH R + Sbjct: 172 GMPVMVTRCSNNYGPYQFPEKLIPLVYLKASRSEPIPVYGDGQNVRDWIYVMDHCRGVEA 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L KG+ G YN GG+ ER N+++V L+ L KS +LI + DRPGHDRRYA Sbjct: 232 TLFKGQPGAVYNFGGDAERTNLEVV----RLILRLTGKS---EDLITHVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + ++ +++GW PQ + E G+ +T+ WY N W Sbjct: 285 MAFARSTADLGWTPQHSFEDGMARTLAWYKANEAW 319 >gi|160889196|ref|ZP_02070199.1| hypothetical protein BACUNI_01617 [Bacteroides uniformis ATCC 8492] gi|270296010|ref|ZP_06202210.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D20] gi|317480632|ref|ZP_07939719.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 4_1_36] gi|156861203|gb|EDO54634.1| hypothetical protein BACUNI_01617 [Bacteroides uniformis ATCC 8492] gi|270273414|gb|EFA19276.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D20] gi|316903139|gb|EFV25006.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. 4_1_36] Length = 380 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 162/357 (45%), Positives = 226/357 (63%), Gaps = 32/357 (8%) Query: 4 IVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++ ND+K V+++D LTYAGNL ++ F++ DIC Sbjct: 5 LVTGAAGFIGANYIKYILAKHNDIK--VVILDALTYAGNLGTIANDIDDERCFFVKGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR +++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W Sbjct: 63 DRVLADELFAKYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKD 122 Query: 121 DK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ T Sbjct: 123 ESGYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADMVVMAYHDT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV ++ CSNNYGPYHFPEKLIPL I ++EG ++ +YGDG NVRDWLYVEDH +A+ Sbjct: 183 YKMPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKNLPVYGDGSNVRDWLYVEDHCKAID 242 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV-FEIGFL--------------------LDALIPK 273 LV+++G GE YN+GG+NE+ N++IV I + D I Sbjct: 243 LVVREGVEGEVYNVGGHNEKTNLEIVKLTIATVRRLMEEEPRYRAVLKKQVKAADGTIDI 302 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S+ + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 303 SWINEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFEVGIVKTIEWYLNNQPW 359 >gi|307565288|ref|ZP_07627781.1| dTDP-glucose 4,6-dehydratase [Prevotella amnii CRIS 21A-A] gi|307345957|gb|EFN91301.1| dTDP-glucose 4,6-dehydratase [Prevotella amnii CRIS 21A-A] Length = 384 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 161/358 (44%), Positives = 227/358 (63%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+ D I+++++D LTYAGNL ++K+ + F++ DI Sbjct: 5 LVTGAAGFIGANFVKYLLYKKYKDENIKLIILDALTYAGNLGTIKDDIDNKRCFFIKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + + D +VNFAAESHVDRSI F++ NI+GT L++ + W Sbjct: 65 RDRKLLNNIFSQHDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQCLMDAAKHAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K+ R+ Q+STDEVYGSL ++G F+E P P SPYSA+K S+D++V A+ Sbjct: 125 DAQGYPTWKEGKRYHQVSTDEVYGSLGNEGFFTETSPLCPHSPYSASKTSADHIVKAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I +++G + +YG G N+RDWL+VEDH +A+ Sbjct: 185 TYHMPVTITRCSNNYGPYHFPEKLIPLIINNILKGKSLPVYGKGLNIRDWLFVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V++KGR GE YNIGG+NE KNIDIV I + D + I Sbjct: 245 DMVIRKGRNGEVYNIGGHNEMKNIDIVKLTIKSIHDMMESNKNLRSILKKQEKDANGNIS 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + ELI F+ DR GHD RYAID++KIK E+GW+P+ G+ KT+ W LDN W Sbjct: 305 IDWINDELITFVPDRLGHDARYAIDATKIKKELGWYPETMFAEGIIKTIRWNLDNQQW 362 >gi|218778332|ref|YP_002429650.1| dTDP-glucose 4,6-dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218759716|gb|ACL02182.1| dTDP-glucose 4,6-dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 355 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 158/335 (47%), Positives = 217/335 (64%), Gaps = 8/335 (2%) Query: 2 RLIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQVD 58 ++++TGGAGFIGS + + L D + +D LTYAG+ + + + Q++ + + Sbjct: 5 KILLTGGAGFIGSNFILQALREDPHCGICNLDALTYAGSPRNFQGLPRDQASRHKLVHGN 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + E DA+V+FAAESHVDRSI A F +TN++GT LLE R W Sbjct: 65 ICDAALLERLFLEEDFDAVVHFAAESHVDRSIKDALCFASTNVMGTCTLLEAARQNWE-- 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S+ + F F+ +STDEV+GSL +G FS+ PY+PSSPYSA+KA+SD+ V A+ TYG+ Sbjct: 123 SRGRPRDFLFIHVSTDEVFGSLGPEGSFSQASPYDPSSPYSASKAASDHFVRAYHRTYGL 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P ++SNCSNNYGPY FPEKLIPL + ++++ + +YGDGQNVRDWL+VEDH RAL +L Sbjct: 183 PCVVSNCSNNYGPYQFPEKLIPLMLMQILDQKPLPVYGDGQNVRDWLFVEDHCRALMHIL 242 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYA 295 +KG GE Y IGG E+ N+++V + L D + P S LI ++DRPGHDRRYA Sbjct: 243 EKGAAGETYIIGGGEEKTNLEVVHLLCELADRKLNRPASEDSKRLISMVKDRPGHDRRYA 302 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D S+ + +GW P GL TV WYL N W Sbjct: 303 MDFSETTARLGWKPAHTFRQGLEATVDWYLSNRTW 337 >gi|78357225|ref|YP_388674.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219630|gb|ABB38979.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 340 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 218/336 (64%), Gaps = 22/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSN---LFSFLQ 56 MRL+VTGG GFIG+ RY +N + ++ +DKLTYAGN +L +I Q++ + F + Sbjct: 1 MRLLVTGGCGFIGTNFIRYQLNVHPQTTIVNLDKLTYAGNPQNLTDIQQAHGGTRYFFEK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +++ ++++ PDA++NFAAESHVDRSI F+TTN++GT +L++ R Sbjct: 61 ADIADAAAVQAVIEKYSPDAVLNFAAESHVDRSISDPAPFVTTNVLGTQVLMQAAR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 RF+ ISTDEVYGSL + F+E P P+SPYSA+KA +D +V A+ T Sbjct: 117 -----TAGIKRFVHISTDEVYGSLLPHEAPFTESNPLLPNSPYSASKAGADLMVRAFVET 171 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG P +++ CSNNYGPY FPEKLIPL + + E + + +YGDG NVRDW++VEDH R + Sbjct: 172 YGFPAIITRCSNNYGPYQFPEKLIPLMLGKAWENAPLPVYGDGTNVRDWIHVEDHCRGID 231 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L L+KGR G YN GGN ER N+D+V I L P+S LI F++DRPGHDRRY Sbjct: 232 LALRKGRDGAVYNFGGNAERTNLDVVRAILRLTGK--PES-----LISFVKDRPGHDRRY 284 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+D + E+G+ P + E+GL T+ WY + W Sbjct: 285 AMDFTLAGDELGYAPVHDFETGLADTLAWYEKHTTW 320 >gi|288928030|ref|ZP_06421877.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 317 str. F0108] gi|288330864|gb|EFC69448.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 317 str. F0108] Length = 382 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 173/385 (44%), Positives = 232/385 (60%), Gaps = 38/385 (9%) Query: 4 IVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+ D I+V+V+D LTYAGNL ++K F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLEKKYQDEDIKVIVLDLLTYAGNLGTIKNNIDDKRCVFVRGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + + D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RDRDLVNGLFADNEIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARKAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL D G F E P P SPYSA+KAS+D V+A+ Sbjct: 125 DETGYPTWKAGKRYHQVSTDEVYGSLGDTGYFMETTPLCPHSPYSASKASADMFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G+NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGKGENVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLLDA-----------------LIP 272 LV+++GR+GE YN+GG+NE KNIDIV I L+D+ I Sbjct: 245 DLVVREGRVGEVYNVGGHNEMKNIDIVKLIIKTIRQLMDSNKDLRHVLKKQELDANGEIR 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + +LI ++ DR GHD RY ID +KIK+E+GW+P+ G+ KT+ W L N W Sbjct: 305 TDWINEDLITYVADRLGHDLRYGIDPTKIKNELGWYPETMFADGIVKTIEWNLANQEWIA 364 Query: 333 PLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 365 EV-----TSGDYQKY--YEEMYGNR 382 >gi|228994850|ref|ZP_04154647.1| DTDP-glucose 4,6-dehydratase [Bacillus pseudomycoides DSM 12442] gi|228764897|gb|EEM13654.1| DTDP-glucose 4,6-dehydratase [Bacillus pseudomycoides DSM 12442] Length = 290 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 154/302 (50%), Positives = 210/302 (69%), Gaps = 17/302 (5%) Query: 34 LTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGA 93 LTYAGNL+S+K+I + ++F+Q DI D + I++ +++++ D+IV+FAAESHVDRSI G Sbjct: 2 LTYAGNLSSIKDIEPHSNYTFIQGDIRDAKKIQAVMQDYKIDSIVHFAAESHVDRSIQGP 61 Query: 94 DEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYN 152 +F TTNI+GT +LLE + + RFL ISTDEVYGSL + G F+E+ P + Sbjct: 62 MQFYTTNIVGTAVLLEAAKTFGIQ---------RFLHISTDEVYGSLGETGHFTEETPIS 112 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF 212 P+SPYSA+KASSD + L++ TY +PV+++ CSNNYGPY +PEKLIPL IT +E + Sbjct: 113 PNSPYSASKASSDLIALSYFETYKLPVIVTRCSNNYGPYQYPEKLIPLMITNAMEDKELP 172 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG GQNVRDWL+V DH A+ LVL GR GE YN+GGNNE++NI+IV + ++ Sbjct: 173 VYGRGQNVRDWLHVFDHCTAIDLVLHNGRDGEIYNVGGNNEKRNIEIV-------EMILE 225 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K +I F+ DR GHD RYAIDSSK++ E+GW P + GL T+ WY N WW+ Sbjct: 226 KLGKSKNMISFVPDRLGHDWRYAIDSSKLQRELGWKPVYSFTKGLEDTIEWYRKNEQWWK 285 Query: 333 PL 334 PL Sbjct: 286 PL 287 >gi|219683073|ref|YP_002469456.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis AD011] gi|219620723|gb|ACL28880.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis AD011] gi|289177520|gb|ADC84766.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis BB-12] Length = 347 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 215/338 (63%), Gaps = 29/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + + V+D LTYAGNL ++K I + F+ +ICD Sbjct: 18 IIVTGGCGFIGSNFVHYVYNNHPDVHITVLDALTYAGNLENIKPI-LGDRVEFVHGNICD 76 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L E P DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 77 AQL----LDELVPGHDAIVHYAAESHNDNSIANPEPFVKTNVEGTFRLLEAAR------- 125 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF ISTDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW TYG Sbjct: 126 ---KYDVRFHHISTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKASSDMLVRAWHRTYG 182 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +IEG LYGDG NVRDW++ EDH A++ + Sbjct: 183 LRTTISNCSNNYGPYQHVEKFIPRQITNIIEGIRPKLYGDGLNVRDWIHTEDHSSAVWTI 242 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L GR+GE Y IG N ER N+ ++ +I ++ P+ + +++DRPGHDRRYAI Sbjct: 243 LTTGRLGETYLIGANGERNNLTVLHDILRVMGQ--PE-----DAFDWVKDRPGHDRRYAI 295 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 DS+K+++E+GW P + ESGL +TV WY+DN WW P Sbjct: 296 DSTKLQTELGWRPTHTDFESGLRQTVQWYIDNPQWWEP 333 >gi|183602163|ref|ZP_02963531.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium animalis subsp. lactis HN019] gi|241191395|ref|YP_002968789.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196801|ref|YP_002970356.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218656|gb|EDT89299.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium animalis subsp. lactis HN019] gi|240249787|gb|ACS46727.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251355|gb|ACS48294.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794388|gb|ADG33923.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium animalis subsp. lactis V9] Length = 339 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 215/338 (63%), Gaps = 29/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + + V+D LTYAGNL ++K I + F+ +ICD Sbjct: 10 IIVTGGCGFIGSNFVHYVYNNHPDVHITVLDALTYAGNLENIKPI-LGDRVEFVHGNICD 68 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L E P DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 69 AQL----LDELVPGHDAIVHYAAESHNDNSIANPEPFVKTNVEGTFRLLEAAR------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF ISTDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW TYG Sbjct: 118 ---KYDVRFHHISTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKASSDMLVRAWHRTYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +IEG LYGDG NVRDW++ EDH A++ + Sbjct: 175 LRTTISNCSNNYGPYQHVEKFIPRQITNIIEGIRPKLYGDGLNVRDWIHTEDHSSAVWTI 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L GR+GE Y IG N ER N+ ++ +I ++ P+ + +++DRPGHDRRYAI Sbjct: 235 LTTGRLGETYLIGANGERNNLTVLHDILRVMGQ--PE-----DAFDWVKDRPGHDRRYAI 287 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 DS+K+++E+GW P + ESGL +TV WY+DN WW P Sbjct: 288 DSTKLQTELGWRPTHTDFESGLRQTVQWYIDNPQWWEP 325 >gi|72383074|ref|YP_292429.1| dTDP-glucose 4,6-dehydratase [Prochlorococcus marinus str. NATL2A] gi|72002924|gb|AAZ58726.1| dTDP-glucose 4,6-dehydratase [Prochlorococcus marinus str. NATL2A] Length = 344 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 217/326 (66%), Gaps = 1/326 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG+GFIG+ L L+ + +++ +DK+ YA NL E SN + FL VD+ + Sbjct: 11 ILITGGSGFIGTNLISRLLRETTLKIYNLDKINYASNLKVFDEHIDSNKYHFLNVDLFNI 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++A++ PD + + AAESHVD+SI +F+ +NIIGTF LL+E R W +S ++ Sbjct: 71 EDTKNAIRFSNPDLVFHLAAESHVDKSISKPKDFLDSNIIGTFNLLQELRTHWELMSINR 130 Query: 123 KDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ FR + +STDEV+GS+ +G F SE Y+P SPYSATKA+SD+LV AW +TYG P ++ Sbjct: 131 QNSFRLIHVSTDEVFGSIKEGFFFSETTSYDPRSPYSATKAASDHLVKAWSNTYGFPAII 190 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +N NN+GP+ +PEKLIP+ I + + LYG+GQNVRDW++VEDHV AL V+ KGR Sbjct: 191 TNSCNNFGPWQYPEKLIPVIINNALNSKSIPLYGNGQNVRDWIFVEDHVDALIQVMLKGR 250 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +G+ Y IG + N +IV + LD + H +F++DR GHD RYAID++KI Sbjct: 251 LGDSYCIGSRQLKTNEEIVNIVCDYLDLYKKSNAPHIRFKKFVKDRAGHDLRYAIDNNKI 310 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 +E+ W P+ + ++ TV WYLDN Sbjct: 311 INELKWSPKYDFYEAIDFTVRWYLDN 336 >gi|11497937|ref|NP_069161.1| dTDP-glucose 4,6-dehydratase (rfbB) [Archaeoglobus fulgidus DSM 4304] gi|2650312|gb|AAB90911.1| dTDP-glucose 4,6-dehydratase (rfbB) [Archaeoglobus fulgidus DSM 4304] Length = 332 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 212/337 (62%), Gaps = 17/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGS RY + ++++L +D L Y N +LK++++ +SF++ DI Sbjct: 1 MRILVTGGMGFIGSNFVRYALAHHQVEILNLDALKYGSNPENLKDLAEDERYSFIKGDIN 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +K+ DA+VNFAAESHVDRSI FI +N +G + +LE R C Sbjct: 61 DYELVSDLIKKV--DAVVNFAAESHVDRSISSPYAFIESNFLGVYTILEAVR---KC--- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + +STDEVYG ++KG F+E PSSPYSA+KA++D LVL + TY + Sbjct: 113 --NPEVRLVHVSTDEVYGDIEKGSFTEKDGLMPSSPYSASKAAADMLVLGYARTYNLNAS 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ C+NNYGPY FPEKLIP I R V +YG G NVRDW+YVEDH RA++ V++KG Sbjct: 171 ITRCTNNYGPYQFPEKLIPKTIIRAKMNLSVPIYGTGMNVRDWIYVEDHCRAVWEVMEKG 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 E YNI ER N++IV I ++ LI ++EDRPGHD RY++DS K Sbjct: 231 ERREVYNISSGEERTNLEIVKTILEIMG-------KDESLIEYVEDRPGHDVRYSLDSWK 283 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I E+ W P+ + E G+ +TV WYL N WWWRPL E Sbjct: 284 IMRELKWRPKISFEEGIRRTVEWYLQNEWWWRPLADE 320 >gi|288802206|ref|ZP_06407646.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica D18] gi|288335173|gb|EFC73608.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica D18] Length = 384 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 165/378 (43%), Positives = 237/378 (62%), Gaps = 36/378 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+V+D LTYAGNL ++K+ + F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYVNEDIKVIVLDALTYAGNLGTIKDDIDNERCIFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE E+ D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRELADKLFAEYDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ K+ R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D+ V+A+ Sbjct: 125 DEQGYPTWKEGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P+ ++ CSNNYG YHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPISITRCSNNYGTYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR+GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGRVGEVYNVGGHNEMKNIDIVKLTIKTIHDMMAEDKNLRTILKKQVKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + ELI + DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L++ W + Sbjct: 305 ISWINEELITHVPDRLGHDARYAIDPTKIKNELGWYPETMFADGIVKTIRWNLEHQDWIQ 364 Query: 333 PLYKELKPDNDYSKWKNL 350 + DY K+ ++ Sbjct: 365 EV-----TSGDYQKYYDM 377 >gi|75758501|ref|ZP_00738622.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494028|gb|EAO57123.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 318 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 221/334 (66%), Gaps = 18/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS RY++ + Q++ +D LTYAGNL++LKEIS + + F++ DI Sbjct: 1 MKLLITGGAGFIGSNFIRYILKKYPQYQIVNVDLLTYAGNLSNLKEISSNQNYKFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + I K+ + D ++NFAAESHVDRSI F+ TNI+GT LL+ S Sbjct: 61 SNEIFIDKLFKKEKFDYVLNFAAESHVDRSIKSPHIFVQTNILGTQALLQ---------S 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+QISTDEVYG+L + G F+E P+SPYSA+KAS+D +V A+ T+G+P Sbjct: 112 AYKTKVKKFVQISTDEVYGTLSQTGAFTEHSIIAPNSPYSASKASADLMVRAYHETFGLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPY F EKLIPL IT + + LYGDG ++RDWL+VEDH A+ LVL Sbjct: 172 MNITRCSNNYGPYQFTEKLIPLTITHALNNKDIPLYGDGLHIRDWLHVEDHCVAIDLVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G G YNIGG+NE N+DIV +I L+ K S I FI DR GHDRRYA+D+ Sbjct: 232 DGADGHIYNIGGDNEYTNLDIVQKIIKFLN----KDQSQ---ITFISDRLGHDRRYAMDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +K+K E+GW P ++GL +T+ WY+DN WW Sbjct: 285 TKLKEELGWKPNYLFDAGLTQTIKWYIDNPTWWE 318 >gi|302038314|ref|YP_003798636.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] gi|300606378|emb|CBK42711.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] Length = 342 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 216/334 (64%), Gaps = 17/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L R L+ + V+ +D L Y+GNL +L +++ ++F+Q DIC Sbjct: 1 MRILVTGGAGFIGSHLVRRLIQSGRHSVVNLDALKYSGNLENLADLAGHPQYAFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + L+ + + I+N AAE+HVDRSIL F T+++GT ILLEE R Sbjct: 61 DQKAVHATLQTHRIEGIINCAAETHVDRSILDPGAFARTDVVGTGILLEEAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RFLQ+STDEVYGS+++G +E P SPYSA+KA D LVL++ TY PV+ Sbjct: 113 -QAGVQRFLQVSTDEVYGSVEQGSSTEGDRLEPRSPYSASKAGGDLLVLSYWTTYRFPVV 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP +PEK IPL T I+G + LYGDG+ RDWL V DH + V ++G Sbjct: 172 VTRGSNTYGPNQYPEKFIPLFATNAIDGEPLPLYGDGRQCRDWLSVYDHAAGIQHVFEQG 231 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 G YN+GG NER+NI + +I A + KS S LIRF+EDRPGHDRRY+ID + Sbjct: 232 EPGTVYNVGGGNERENITVAEQI----VATLGKSRS---LIRFVEDRPGHDRRYSIDCRR 284 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +GW PQ + E GL +TV WY + WWR + Sbjct: 285 LRA-LGWSPQVSFEEGLKQTVEWYRTHERWWRTI 317 >gi|242400016|ref|YP_002995441.1| RfbB dTDP-glucose 4,6-dehydratase [Thermococcus sibiricus MM 739] gi|242266410|gb|ACS91092.1| RfbB dTDP-glucose 4,6-dehydratase [Thermococcus sibiricus MM 739] Length = 333 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 212/338 (62%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGG GFIGS RY+++ +V+ +DKL Y N +LK+ ++F++ DI Sbjct: 1 MRLLVTGGMGFIGSNFIRYVLDKHDDWEVINLDKLGYGSNPANLKDFEGDERYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + +KE DA+VNFAAESHVDRSI FI +N++G + +LE R Sbjct: 61 NDFELVSKLIKEV--DAVVNFAAESHVDRSISTPYAFIESNVLGVYTILEAIR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + IS+DEV+G + KG F+E+ PSSPYSA+KA+ D LVL W TY + Sbjct: 112 -KVNPEVRLVHISSDEVHGDIMKGSFTEEDRLMPSSPYSASKAAGDTLVLGWARTYNLNA 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NNYGPY FPEKLIP I R G + +YG GQNVRDW+YVEDHVRA+ VL K Sbjct: 171 SITRCTNNYGPYQFPEKLIPKTIIRASMGLKIPIYGTGQNVRDWIYVEDHVRAVEAVLLK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G E YNI ER N+++V I L+ +LI F+EDRPGHD RY++DS Sbjct: 231 GEPREIYNISAGEERTNLEVVKTILKLMG-------KDEDLIEFVEDRPGHDLRYSLDSW 283 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI ++ W P+ + E G+ KTV WYL+N WWWRPL E Sbjct: 284 KIMRDLKWRPKVSFEEGIKKTVEWYLNNEWWWRPLVDE 321 >gi|159033049|gb|ABW87810.1| SpcE [Streptomyces spectabilis] Length = 330 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 216/342 (63%), Gaps = 26/342 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV------NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF 54 MR+IVTGGAGFIGS R ++ ND++I VL DKLTYAG +L ++ +F Sbjct: 1 MRIIVTGGAGFIGSEFVRSMLLAPGAANDIRITVL--DKLTYAGVRENLDPVAGHPRHAF 58 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DICD + + + DA+V+FAAE+HVDRSI G+ F+TTN++GT +LL+ R Sbjct: 59 VHGDICDGDFLDQVVPGH--DAVVHFAAETHVDRSITGSAPFVTTNVLGTQLLLDAAR-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RFL +STDEVYGS+ G +SE+ P P+SPY+ATKA S+ L LA T Sbjct: 115 -------RHGVGRFLHVSTDEVYGSIPVGSWSEESPLAPNSPYAATKAGSELLALACHRT 167 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V+++ CSNNYGPY FPEK+IPL ITR+++G V LYGDGQ+VRDWL+V DH R + Sbjct: 168 HGMDVVVTRCSNNYGPYQFPEKVIPLFITRLLDGGKVPLYGDGQHVRDWLHVSDHCRGVE 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L L+ GR GE Y+IGG E N + G LL A + E + + DR GHD RY Sbjct: 228 LALRHGRAGEVYHIGGGTELTNEQLT---GHLLAA----TGRGWEQVERVPDRKGHDARY 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 ++D +K +E+G+ P E GL TV WY N WW PL + Sbjct: 281 SLDCTKAATELGYAPLVGFERGLADTVAWYAGNRSWWEPLQR 322 >gi|281423510|ref|ZP_06254423.1| dTDP-glucose 4,6-dehydratase [Prevotella oris F0302] gi|281402330|gb|EFB33161.1| dTDP-glucose 4,6-dehydratase [Prevotella oris F0302] Length = 382 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 170/385 (44%), Positives = 233/385 (60%), Gaps = 38/385 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHRKYKEQDIKVIILDALTYAGNLGTIKDDIDGKRCVFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + E D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RDRKLVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ Sbjct: 125 DAQGYPTWKPGKRYHQVSTDEVYGSLGAEGYFTEKTPLCPHSPYSASKTSADMFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPTTITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPK---------- 273 LV+++GR GE YN+GG+NE NIDIV E L +++ K Sbjct: 245 DLVVREGREGEVYNVGGHNEMTNIDIVKLTIKTIHDMMEADKSLRSVLKKKVEDAQGDLD 304 Query: 274 -SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + +LI + DR GHD+RYAID +KIK E+GW+P+ G+ KT+ W LDN W + Sbjct: 305 ISWINNDLITHVTDRLGHDKRYAIDPTKIKEELGWYPETKFADGIVKTIKWNLDNQQWIK 364 Query: 333 PLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 365 EV-----TSGDYQKY--YAEMYGNR 382 >gi|256028450|ref|ZP_05442284.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] gi|289766372|ref|ZP_06525750.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] gi|289717927|gb|EFD81939.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] Length = 399 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 161/376 (42%), Positives = 233/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+V+D LTYAGNL ++KE + + F +VDI +R Sbjct: 5 LITGAAGFIGANFLKYILKKYEDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRNR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ +S+D+ Sbjct: 65 KEIERIFSENKIDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKSWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGVKYLQVSTDEVYGSLSKDYNEPIELVIDDEAVKKVVKNRKNLKTYGDIFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I ++ Sbjct: 184 EESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKSREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KTV WYL+N W Sbjct: 364 TGIRKTVNWYLENQDW 379 >gi|307720181|ref|YP_003891321.1| dTDP-glucose 4,6-dehydratase [Sulfurimonas autotrophica DSM 16294] gi|306978274|gb|ADN08309.1| dTDP-glucose 4,6-dehydratase [Sulfurimonas autotrophica DSM 16294] Length = 354 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/340 (46%), Positives = 218/340 (64%), Gaps = 17/340 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y ++ ++ +D LTYAGNL +LKE + + F++ DIC+ Sbjct: 9 ILVTGCAGFIGSNFVPYFLDKYNDYNIVNLDLLTYAGNLGNLKEAQNNPRYKFIKGDICN 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + E+ +++FAAESHVD SI FI TN+ GTF LL+ +W Sbjct: 69 RELVEFIFNEYDIRGVIHFAAESHVDNSIKNPGIFIETNVNGTFTLLDVAYKYWMDAPFK 128 Query: 122 KKDQF----------RFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLA 170 K++F RF ISTDEVYG+L++ LF+E+ PY P+SPYSA+KASSD +V + Sbjct: 129 YKERFTTDASASAKPRFHHISTDEVYGTLNETDLFTEETPYAPNSPYSASKASSDMIVRS 188 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + TYG+ +++NCSNNYGP EKLIP I + + G ++ +YGDG+N+RDWLYV DH Sbjct: 189 YQETYGLNTVITNCSNNYGPKQHDEKLIPTIIRKALAGENIPIYGDGKNIRDWLYVLDHC 248 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSYSHTELIRFIE 285 + + LV G+ YNIGG NER N+ IV I +LD +P S+ ELI F+E Sbjct: 249 KGIDLVYHSGKEANVYNIGGKNERTNLQIVNSITSILDEKVPPKEKIDKESYKELITFVE 308 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 DR GHDRRYAID++K+++E+GW EN ++G+ KTV WYL Sbjct: 309 DRAGHDRRYAIDATKLENELGWKADENFDTGIVKTVNWYL 348 >gi|261337633|ref|ZP_05965517.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium gallicum DSM 20093] gi|270278059|gb|EFA23913.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium gallicum DSM 20093] Length = 339 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 166/339 (48%), Positives = 220/339 (64%), Gaps = 29/339 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+D LTYAGNL ++K + ++ F+ +ICD Sbjct: 10 IIVTGGCGFIGSNFVHYVVNNHPETHVTVLDALTYAGNLENIKLLLGDHV-EFVHGNICD 68 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L E P DAIV++AAESH D SI + F+ TN+ GTF L+E R Sbjct: 69 AQL----LDELVPGHDAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLIEAAR------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW TYG Sbjct: 118 ---KYDVRFHHVSTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKASSDMLVRAWHRTYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + +SNCSNNYGPY EK IP IT +IEG LYGDG NVRDW++ EDH A++ + Sbjct: 175 LRMTISNCSNNYGPYQHVEKFIPRQITNIIEGIRPKLYGDGLNVRDWIHTEDHSSAVWTI 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIGE Y IG N ER N+ ++ +I ++ P+ + +++DRPGHDRRYAI Sbjct: 235 LTQGRIGETYLIGANGERNNLTVLKDILRVMGQ--PE-----DAFDWVKDRPGHDRRYAI 287 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 DS+K+++E+GW P + ESGL +TV WY+DN WW P+ Sbjct: 288 DSTKLQTELGWRPTHTDFESGLRQTVQWYIDNPQWWEPV 326 >gi|297196517|ref|ZP_06913915.1| dTDP-glucose 4,6-dehydratase [Streptomyces pristinaespiralis ATCC 25486] gi|197722844|gb|EDY66752.1| dTDP-glucose 4,6-dehydratase [Streptomyces pristinaespiralis ATCC 25486] gi|302607795|emb|CBW45706.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces pristinaespiralis] Length = 335 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 210/337 (62%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 R++VTGGAGFIGS R L+ D + V V+D LTYAGN +L + + F+F+ Sbjct: 3 TRILVTGGAGFIGSHYVRTLLGPHGDPDVTVTVLDALTYAGNPANLDAVRDNPRFTFVHG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD + + + D +V+FAAESHVDRSI GA +F+ TN+ GT LL+ Sbjct: 63 DICDAGLVDTLMPRH--DQVVHFAAESHVDRSIAGAADFVRTNVAGTQTLLDAAL----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F+ ISTDEVYGS+D G + E P P+SPYSA KASSD + LA T+G+ Sbjct: 116 ----RHGPTTFVHISTDEVYGSIDIGSWPETDPLAPNSPYSAAKASSDLIALAHHRTHGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP+ +PEK++PL ITR++ G V LYGDG NVRDWL+V+DHVR + LV Sbjct: 172 DVRITRCSNNYGPHQYPEKVVPLFITRLLTGRRVPLYGDGGNVRDWLHVDDHVRGIELVR 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ LLDA S + + DR GHDRRY++D Sbjct: 232 TKGRSGEVYNIGGGTELSNKELT---ALLLDACDADWSS----VDHVADRKGHDRRYSVD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI E+G+ P+ + GL +TV WY DN WW+PL Sbjct: 285 CRKITRELGYEPRTDFTDGLARTVAWYRDNRAWWQPL 321 >gi|14590332|ref|NP_142398.1| dTDP-glucose 4,6-dehydratase [Pyrococcus horikoshii OT3] gi|126030662|pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 gi|126030663|pdb|2HUN|B Chain B, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 gi|3256817|dbj|BAA29500.1| 336aa long hypothetical dTDP-glucose 4,6-dehydratase [Pyrococcus horikoshii OT3] Length = 336 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/338 (46%), Positives = 214/338 (63%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGG GFIGS RY++ +V+ IDKL Y N +LK++ ++F++ D+ Sbjct: 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDV 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E ++ +++ D +V+ AAESHVDRSI + F+ +N+IGT+ LLE R Sbjct: 64 ADYELVKELVRKV--DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIR------- 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + RF+ +STDEVYG + KG F+E+ PSSPYSATKA+SD LVL W TY + Sbjct: 115 -RENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNA 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NNYGPY FPEKLIP I R G + +YG G+NVRDWLYVEDHVRA+ LVL K Sbjct: 174 SITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G E YNI E+ N+++V I L+ ELI +EDRPGHD RY++DS Sbjct: 234 GESREIYNISAGEEKTNLEVVKIILRLMG-------KGEELIELVEDRPGHDLRYSLDSW 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI ++ W P+ + G+ KT+ WYL N WWW+PL E Sbjct: 287 KITRDLKWRPKYTFDEGIKKTIDWYLKNEWWWKPLVDE 324 >gi|110596874|ref|ZP_01385164.1| dTDP-glucose 4,6-dehydratase [Chlorobium ferrooxidans DSM 13031] gi|110341561|gb|EAT60021.1| dTDP-glucose 4,6-dehydratase [Chlorobium ferrooxidans DSM 13031] Length = 349 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 218/333 (65%), Gaps = 7/333 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIGS + R+ + V +D LTYAGNL +L ++ + F++ DI Sbjct: 1 MHILITGGAGFIGSHVVRHFLKCYPSYTVTNLDSLTYAGNLANLSDVDALPNYRFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +E + D +++ AAESHVDRSI EF+ TN++GT LL + W Sbjct: 61 TDSAFLLRLFEEQRFDGVIHLAAESHVDRSIANPTEFVVTNVLGTVNLLNAAKASW---- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q + + RF ISTDEVYGSL +GLF+E+ Y+P SPYSA+KA+SD+ V A+ TYG+P Sbjct: 117 QSEMEGKRFYHISTDEVYGSLGAEGLFTEETAYDPHSPYSASKAASDHFVRAYHDTYGLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYG + FPEKLIPL I + + +YG G+NVRDWL+V DH A+ ++ Sbjct: 177 VVISNCSNNYGSFQFPEKLIPLFINNIRNNKPLPVYGKGENVRDWLWVVDHAVAIDVIYH 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 +GR GE YNIGG+NE NID++ ++ ++D + + +E LI ++ DR GHD RYAID Sbjct: 237 RGRSGETYNIGGHNEWTNIDLIRQLCRIMDRKLGRGAGESEKLITYVTDRAGHDLRYAID 296 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SSK++ E+GW P + E GL TV WYL N W Sbjct: 297 SSKLQRELGWIPSISFEKGLELTVEWYLANQEW 329 >gi|251779542|ref|ZP_04822462.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083857|gb|EES49747.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 339 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 224/337 (66%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y++ + +++ +D LTYAGN+ +L+ + + F+F ++DI Sbjct: 1 MKIVVTGGAGFIGGNFVHYMLKKYNEYKIICVDALTYAGNMETLESVKDNKNFNFYKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + ++ PD IVNFAAESHVDRSI + F+ TNI+GT +L++ +C+ Sbjct: 61 ADREAVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIMGTAVLMD------ACMK 114 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 115 YGIK---RYHQVSTDEVYGDLPIDRPDLFFTEETPIHTSSPYSSSKASADLLVGAYNRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +S CSNNYGPYHFPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ L Sbjct: 172 GLKATISRCSNNYGPYHFPEKLIPLMIANALNDKELPVYGTGENVRDWLYVEDHCRAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +G +GE YNIGG+NER N+++V +I + LI+F+ DR GHD RYA Sbjct: 232 IIHRGTVGEVYNIGGHNERTNLEVV-------KTIIHELGKQENLIKFVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P + + G+ KT+ WYL+N WW Sbjct: 285 IDPTKIHNELGWLPTTSFDEGIKKTIKWYLENRTWWE 321 >gi|91201500|emb|CAJ74560.1| strongly similar to dTDP-D-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 340 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 216/338 (63%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQ 56 M +++TGGAGFIGS R +V V+V+DKLTYAGNL +L++I + S F F + Sbjct: 1 MAILITGGAGFIGSHFVRRMVK--HNHVVVLDKLTYAGNLENLRDIREDREFSGYFKFYK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DIC++E + + + D IVNFAAE+HVDRSIL A FI T+I G F+LLE +R + Sbjct: 59 GDICNQELVDHIMSTEKIDVIVNFAAETHVDRSILSAGTFIDTDIKGVFVLLEASRRYTI 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F+QISTDEVYG+ F E NPS+PY+A+KA D L A+ +TY Sbjct: 119 K---------KFIQISTDEVYGTAFHDAFKETDSLNPSNPYAASKAGGDRLAFAYWNTYK 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P++++ SNNYG Y PEK IPL IT IEG + LYGDG+ RDW++VEDH A+ + Sbjct: 170 LPIIITRASNNYGSYQHPEKFIPLFITNAIEGLKLPLYGDGRQERDWIHVEDHCAAIDFI 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG+ GE YNIGG NE++NID F+L L +I ++DR GHDRRYA+ Sbjct: 230 IEKGKEGEVYNIGGGNEKQNIDTAL---FILSVLAKDK----GMIESVKDREGHDRRYAL 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +K+KS +GW PQ + E GL T+ WY +N WWR + Sbjct: 283 DCTKLKS-LGWKPQIDFEEGLRDTIKWYEENEQWWRQI 319 >gi|195953909|ref|YP_002122199.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933521|gb|ACG58221.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 336 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/344 (46%), Positives = 224/344 (65%), Gaps = 22/344 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQ 56 M+L+VTGGAGFIGS R V + +++V+DKLTYAG+L LK + S S +F + Sbjct: 1 MKLLVTGGAGFIGSEFVREGVR-IGYEIVVVDKLTYAGDLERLKGVENNTSLSRFITFYK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI ++E I K +P +V+FAAESHVDRSIL A FI TN+ GT +LL+ + Sbjct: 60 ADITNKEFIEHIFKTEKPKVVVHFAAESHVDRSILDASPFIKTNVEGTQVLLDVAK---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + DK F+ I+TDEVYG L +G F ED P P+SPYS++KA++D L A+ TY Sbjct: 116 DIGVDK-----FINIATDEVYGELGQEGTFKEDSPLVPNSPYSSSKAAADMLGRAYYKTY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV+ SNNYGP+ +PEKLIP+ I + + + +YG GQNVR+WLYV D A++ Sbjct: 171 KLPVITVRPSNNYGPWQYPEKLIPVVILKALNNEKIPVYGTGQNVREWLYVSDCAEAIFE 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KG+IGE YN+G N ER+NID+V I LL + + +LI F++DRPGHD RY+ Sbjct: 231 IMEKGKIGEIYNVGSNQERRNIDVVKTILKLL-------HKNEDLIEFVKDRPGHDFRYS 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +D++KIK+E+GW + E G+ KTV WY++N W K LK Sbjct: 284 LDTTKIKNELGWEAKTTFEEGIEKTVKWYIENMAWVEKKLKYLK 327 >gi|20092575|ref|NP_618650.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] gi|19917850|gb|AAM07130.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] Length = 318 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/335 (47%), Positives = 220/335 (65%), Gaps = 20/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGG GFIGS RY++ Q++ +DKLTYAGN +SLK+I + + F++ DI Sbjct: 1 MKLLVTGGCGFIGSNFIRYMLGKYPHYQIINLDKLTYAGNPSSLKDIKNNPNYFFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + +K+ D +V+FAAESHVDRSI F+ TN++GT LL+ S L+ Sbjct: 61 CDPIVVNEVMKKV--DHVVHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQ------SALA 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + K +F+ ISTDEVYGS+ +G F+E NPSSPYS++KA SD L +++ TYG+PV Sbjct: 113 NNIK---KFVHISTDEVYGSIKEGSFTETDKLNPSSPYSSSKAGSDLLAMSYYTTYGLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NN+GPY +PEKLIP I+R+ EG V +YG G N+RDW+YVEDH A+ VL Sbjct: 170 CITRCTNNFGPYQYPEKLIPFFISRLAEGKKVPVYGTGLNIRDWIYVEDHCSAVDFVLHN 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNI G NE N++I LL L S I ++EDR GHD RY++D S Sbjct: 230 GSSGEVYNIDGGNELTNLEITHR---LLKMLGKDESS----IEYVEDRKGHDFRYSLDGS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K ++GW PQ + ++ L +T WY++N WWW PL Sbjct: 283 KLK-KMGWKPQYDFDTALEQTARWYVENRWWWEPL 316 >gi|218511482|gb|ACK77743.1| putative dNDP-glucose 4,6-dehydratase [Streptomyces aureofaciens] Length = 337 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 221/339 (65%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L++ + +V V+DKLTYAGN +L + F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRTLLDGGYPGHEEDRVTVLDKLTYAGNRENLP--AAHPRLDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CD +RS L DA+V+FAAESHVDRS+ A EF+ TN+ GT LL+ Sbjct: 59 RGDVCDEALLRSLLPGH--DAVVHFAAESHVDRSVHSAAEFVRTNVGGTQTLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL+ R + +STDEVYGS+D+G ++E+ P P+SPY+A+KASSD + A+ T+ Sbjct: 111 ACLATGVG---RVVHVSTDEVYGSIDEGAWTEERPLLPNSPYAASKASSDLIARAYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEKLIPL +T ++EG V LYGDG+NVR+WL+V+DH RA+ L Sbjct: 168 GLDVSITRCSNNYGPHQHPEKLIPLFVTNLLEGERVPLYGDGRNVREWLHVDDHCRAIAL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YN+GG NE+ N+ I + L+ + +R + DR GHD RYA Sbjct: 228 VLDRGRSGEVYNVGGGNEQTNLHIT-------ERLLALCGADASAVRRVADRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI+ E+G+ P+ E GL TV WY DN WW+ + Sbjct: 281 LDETKIREELGYAPRIPFEQGLADTVAWYRDNPGWWKAV 319 >gi|256846090|ref|ZP_05551548.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_36A2] gi|256719649|gb|EEU33204.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_36A2] Length = 399 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 161/376 (42%), Positives = 233/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKYEDIKVIVVDLLTYAGNLGTIKEELRDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + +W+ +S+D+ Sbjct: 65 KEIERIFTENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKFWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDK------------------------------GLFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGIKYLQVSTDEVYGSLSKDYNEPIELVIDDEAVKKVVKNRKNLKTYGDNFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 184 EESPADPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYQFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KTV WYL+N W Sbjct: 364 TGIRKTVKWYLENQDW 379 >gi|158056584|emb|CAP11384.1| 4,6-dehydratase [Streptomyces olivaceus] Length = 329 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 220/339 (64%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M+++VTGGAGFIGS R L+++ QV V+D LTY+GN +L ++ ++F+ Sbjct: 1 MKILVTGGAGFIGSQFVRALLSEELPSGKGAQVTVLDNLTYSGNEANLAPVADKPGYTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + A++ DA+V+FAAESHVDRSIL + F+TTN++GT +LL+ + Sbjct: 61 HGDIRDYAVVDDAMR--GQDAVVHFAAESHVDRSILDSSPFVTTNVLGTQVLLDAAK--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYGS+ +G ++ED P P+SPYSA+KA SD L L++ T+ Sbjct: 116 ------RHGVGRFVHVSTDEVYGSISEGSWTEDWPLAPNSPYSASKAGSDLLALSYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYG YHFPEK+IPL T +++G V LYG+G N+RDWL+V DH R + + Sbjct: 170 GMDVVVTRCSNNYGQYHFPEKMIPLFTTNLLDGKKVPLYGEGLNIRDWLHVSDHCRGIEM 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL+ GR GE Y+IGG E N ++ G LLDA + +++ +EDR GHD RY+ Sbjct: 230 VLRGGRAGEVYHIGGGTEVTNRELT---GLLLDAC----GAGWDMVEHVEDRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + +KI+ E+G+ PQ GL TV WY DN WW PL Sbjct: 283 LSIAKIQEELGYTPQVTFAQGLADTVQWYRDNRAWWEPL 321 >gi|269836998|ref|YP_003319226.1| dTDP-glucose 4,6-dehydratase [Sphaerobacter thermophilus DSM 20745] gi|269786261|gb|ACZ38404.1| dTDP-glucose 4,6-dehydratase [Sphaerobacter thermophilus DSM 20745] Length = 345 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 211/332 (63%), Gaps = 19/332 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS RYL+ +V V DKLTYAGN +L +I F F+ DICDR Sbjct: 8 VLVTGGAGFIGSNFVRYLLERGVPRVTVYDKLTYAGNRANLADIEDHPGFRFIHADICDR 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +A++ DA+VNFAAE+HVDRS+L AD+F+ TN++GT +LLE R + Sbjct: 68 ADVATAMRGC--DAVVNFAAETHVDRSLLDADDFLRTNVVGTHVLLEAAR---------E 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 F+ +STDEVYG + G E+ P P SPYSA+KA + +VLA T+G+P ++ Sbjct: 117 HGVRHFVHVSTDEVYGDVPVGESREEDPLRPRSPYSASKAGGEMMVLAAVATHGVPATIT 176 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 SN YGPY +PEK IPL IT +EG + +YGDG VRDW++V DH + VL KG+ Sbjct: 177 RGSNTYGPYQYPEKFIPLMITNALEGRPLPIYGDGLQVRDWIHVLDHCSGIETVLLKGKP 236 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIK 302 GE YNIGG N R+N+D+ EI LD L H +LI+ +EDR GHDRRYA+ + K++ Sbjct: 237 GEAYNIGGGNPRQNLDVAREI---LDLL---GQPH-DLIQHVEDRLGHDRRYALATGKLR 289 Query: 303 SEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + +GW PQ E GL TV WY + WW PL Sbjct: 290 A-LGWRPQVPFEQGLRDTVEWYRERRDWWEPL 320 >gi|224540726|ref|ZP_03681265.1| hypothetical protein BACCELL_05640 [Bacteroides cellulosilyticus DSM 14838] gi|224517656|gb|EEF86761.1| hypothetical protein BACCELL_05640 [Bacteroides cellulosilyticus DSM 14838] Length = 379 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 224/355 (63%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ ++ L ++++++D LTYAGNL ++ + F++ DICDR Sbjct: 5 LVTGAAGFIGANYIKHILAKHDDVKLVILDALTYAGNLGTIAKDIDDERCIFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +F+ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 VLADELFAKFKFDYVVNFAAESHVDRSIENPQLFLVTNILGTQNLLDAARRAWVTGKDEN 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADMVVMAYHDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKSY 275 +++G GE YN+GG+NE+ N++IV I L+ D I S+ Sbjct: 245 VREGVEGEVYNVGGHNEKTNLEIVKLTIATIHRLMTEKPEYREVLKKKVKDEDGQIDISW 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + +LI F++DR GHD+RYAID +KI + +GW+P+ E G+ KT+ WYL+N W Sbjct: 305 INEDLITFVKDRLGHDQRYAIDPAKITAALGWYPETKFEDGIVKTIEWYLNNQDW 359 >gi|308390300|gb|ADO32598.1| dTDP-D-glucose-4,6-dehydratase [Kitasatospora kifunensis] Length = 324 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/335 (45%), Positives = 213/335 (63%), Gaps = 19/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS R L+ D Q+ V DKLTY+G +L ++ + ++F++ DI Sbjct: 1 MRILVTGGAGFIGSEFVRQLLGADATDQITVFDKLTYSGVEANLAPVADHSGYAFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + + D +V+FAAESHVDRSI GA F+ TN++GT +LL+ R Sbjct: 61 CDADAVDQVMPGH--DVVVHFAAESHVDRSIEGAGPFVVTNVLGTQVLLDAAR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF+ +STDEVYGS+ +G ++E+ P P+SPYSA+KA SD L LA+ T+G+ V Sbjct: 112 --KHGVARFVHVSTDEVYGSISEGSWTEEWPLAPNSPYSASKAGSDLLALAYHRTHGMDV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYG Y FPEK+IPL T +++G V LYG G N+RDWL+V DH R + L ++K Sbjct: 170 VVTRCSNNYGHYQFPEKVIPLFTTNLLDGKKVPLYGTGGNIRDWLHVSDHCRGIELAMRK 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N + L + L+ + + + + DR GHD RY++D + Sbjct: 230 GRAGEVYNIGGGTELTNKE-------LTELLLQAAGADWSSVEPVADRKGHDLRYSLDIT 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI E+G+ PQ E GL T+ WY +N WW PL Sbjct: 283 KISEELGYAPQVRFEDGLAATIAWYRENRAWWEPL 317 >gi|325269767|ref|ZP_08136377.1| 2-isopropylmalate synthase [Prevotella multiformis DSM 16608] gi|324987740|gb|EGC19713.1| 2-isopropylmalate synthase [Prevotella multiformis DSM 16608] Length = 384 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 168/375 (44%), Positives = 231/375 (61%), Gaps = 36/375 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++KE F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHRKYANEDIKVIILDALTYAGNLGTIKEDIDGKRCVFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + E D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RDRELVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ Sbjct: 125 DEQGYPVWKTGKRYHQVSTDEVYGSLGTEGYFTEQTPLCPHSPYSASKTSADLFVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMKNIDIVKLTIRTIHDMMEADKSLRNILKKQEKDSHGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + LI ++ DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L++ W R Sbjct: 305 ISWINEHLITYVPDRLGHDARYAIDPTKIKNELGWYPETMFADGIVKTIRWNLEHQDWIR 364 Query: 333 PLYKELKPDNDYSKW 347 + DY K+ Sbjct: 365 EV-----TSGDYQKY 374 >gi|304388867|ref|ZP_07370917.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] gi|304337160|gb|EFM03344.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] Length = 258 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 143/250 (57%), Positives = 185/250 (74%), Gaps = 2/250 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + +K Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEK 128 Query: 123 KDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW TYG+P + Sbjct: 129 HEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTI 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++NCSNNYGPYHFPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY V+ +G Sbjct: 189 VTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEG 248 Query: 241 RIGERYNIGG 250 +GE YNIGG Sbjct: 249 VVGETYNIGG 258 >gi|257462296|ref|ZP_05626712.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D12] Length = 369 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 229/366 (62%), Gaps = 38/366 (10%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEI-SQSNLFSFLQVDICD 61 +VTG AGFIGS +YL+ + I ++++DKLTYAGNL+++KE+ + + F+ DICD Sbjct: 5 LVTGAAGFIGSHFVKYLLEQEQDIFIVILDKLTYAGNLHNIKEVLEKKDKVRFIPGDICD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + S ++ D IVNFAAESHVD+SI A F+ TN++G +++ + W D Sbjct: 65 TDLMESIFSDYDIDYIVNFAAESHVDKSITQAKIFLETNLMGVQNIMDCAKKSWMIGKDD 124 Query: 122 K-----KDQFRFLQISTDEVYGSLDKGL--------------------------FSEDMP 150 K K+ +FLQISTDEVYGSL+K L F+E+ P Sbjct: 125 KGYPVYKEGKKFLQISTDEVYGSLEKDLPEGRIFTLEEGLFKDRKERICYGNRFFTENSP 184 Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 PSSPYSA+KA++D LV A+ TY P+ ++ CSNNYGP FPEKLIPL I ++EG Sbjct: 185 LQPSSPYSASKAAADMLVSAYFETYHFPMNITRCSNNYGPCQFPEKLIPLTINHVLEGKK 244 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 + +YGDG VRDWLYVEDH +A+YLVLK + GE YNIGG E+ N++IV +L+ + Sbjct: 245 IPIYGDGMQVRDWLYVEDHCKAIYLVLKYAKYGEIYNIGGVQEKTNVEIV---SLILEQI 301 Query: 271 --IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 I + L+ ++EDR GHDRRYAI K+ E+GWFP+ + E+G+ KT+ +++ N Sbjct: 302 SKIQGTEKKDYLLEYVEDRLGHDRRYAIYPKKMVQELGWFPETSFETGMQKTIQYFIQKN 361 Query: 329 WWWRPL 334 + + + Sbjct: 362 PYSKEI 367 >gi|288560317|ref|YP_003423803.1| dTDP-glucose 4,6-dehydratase RfbB2 [Methanobrevibacter ruminantium M1] gi|288543027|gb|ADC46911.1| dTDP-glucose 4,6-dehydratase RfbB2 [Methanobrevibacter ruminantium M1] Length = 335 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 164/332 (49%), Positives = 225/332 (67%), Gaps = 22/332 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS +Y+++ +++ +D LTY GNL +L++I + +SF++ +I Sbjct: 3 KILVTGGAGFIGSNFIKYMLDKYPDYEIVNLDALTYCGNLENLEDIEDNPNYSFVKGNIM 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + IVNFAAESHVDRSI FI +NIIGT +LL+ + Q Sbjct: 63 DEGLVDVVVSSVD--YIVNFAAESHVDRSIEDPQIFIKSNIIGTQVLLDAAYKY-----Q 115 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FLQ+STDEVYGSL +G F+E P +SPYSA+KA +D +V A+G T+ +P+ Sbjct: 116 IKK----FLQVSTDEVYGSLGPEGYFTETTPLQANSPYSASKAGADLMVRAYGETFDLPI 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I+ +E + +YGDG+N+RDWL+V DH A+ LVL K Sbjct: 172 NITRCSNNYGPYQFPEKLIPLMISNALEDKELPIYGDGKNIRDWLHVYDHCSAIDLVLHK 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G+IGE YNIGG+NE++NI+IV LI K + E LI+F++DR GHDRRYAIDS Sbjct: 232 GKIGEVYNIGGHNEKQNIEIV--------KLILKELNKPESLIKFVKDRLGHDRRYAIDS 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 SKI E+GW P+ E+G+ +T+ WYLDN W Sbjct: 284 SKITEELGWKPKYTFETGIVETIHWYLDNQDW 315 >gi|317059965|ref|ZP_07924450.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D12] gi|313685641|gb|EFS22476.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D12] Length = 382 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 229/366 (62%), Gaps = 38/366 (10%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEI-SQSNLFSFLQVDICD 61 +VTG AGFIGS +YL+ + I ++++DKLTYAGNL+++KE+ + + F+ DICD Sbjct: 18 LVTGAAGFIGSHFVKYLLEQEQDIFIVILDKLTYAGNLHNIKEVLEKKDKVRFIPGDICD 77 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + S ++ D IVNFAAESHVD+SI A F+ TN++G +++ + W D Sbjct: 78 TDLMESIFSDYDIDYIVNFAAESHVDKSITQAKIFLETNLMGVQNIMDCAKKSWMIGKDD 137 Query: 122 K-----KDQFRFLQISTDEVYGSLDKGL--------------------------FSEDMP 150 K K+ +FLQISTDEVYGSL+K L F+E+ P Sbjct: 138 KGYPVYKEGKKFLQISTDEVYGSLEKDLPEGRIFTLEEGLFKDRKERICYGNRFFTENSP 197 Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 PSSPYSA+KA++D LV A+ TY P+ ++ CSNNYGP FPEKLIPL I ++EG Sbjct: 198 LQPSSPYSASKAAADMLVSAYFETYHFPMNITRCSNNYGPCQFPEKLIPLTINHVLEGKK 257 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 + +YGDG VRDWLYVEDH +A+YLVLK + GE YNIGG E+ N++IV +L+ + Sbjct: 258 IPIYGDGMQVRDWLYVEDHCKAIYLVLKYAKYGEIYNIGGVQEKTNVEIV---SLILEQI 314 Query: 271 --IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 I + L+ ++EDR GHDRRYAI K+ E+GWFP+ + E+G+ KT+ +++ N Sbjct: 315 SKIQGTEKKDYLLEYVEDRLGHDRRYAIYPKKMVQELGWFPETSFETGMQKTIQYFIQKN 374 Query: 329 WWWRPL 334 + + + Sbjct: 375 PYSKEI 380 >gi|182416971|ref|ZP_02948351.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum 5521] gi|237666254|ref|ZP_04526241.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379147|gb|EDT76649.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum 5521] gi|237658344|gb|EEP55897.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 339 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 221/337 (65%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y++N K +++V+D LTYAGN+ +L + + FSF ++DI Sbjct: 1 MKIVVTGGAGFIGGNFVHYMMNKYKDYKIVVVDSLTYAGNMETLDIVKDNANFSFYKIDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + ++ PD +VNFAAESHVDRSI + F+ TNI+GT +L++ R Sbjct: 61 ADRNAVYEMFEKEIPDIVVNFAAESHVDRSIEDPEIFLKTNIMGTQVLMDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFTEETPLHTSSPYSSSKASADLLVGAYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +S CSNNYGPYHFPEKLIPL I + G + +YG G+NVRDWLYVEDH A+ L Sbjct: 172 GLPATISRCSNNYGPYHFPEKLIPLMIANALNGKKLPVYGTGENVRDWLYVEDHCSAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ GR+GE YNIGG+NER N+ +V ++ + ELI ++ DR GHD RYA Sbjct: 232 IIHNGRVGEVYNIGGHNERSNLQVV-------KTILKELGKGEELITYVGDRKGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI +E+GW P + G+ +T+ WYLDN WW Sbjct: 285 IDPTKIYNELGWLPTTTFDDGIKRTIKWYLDNKCWWE 321 >gi|319903049|ref|YP_004162777.1| dTDP-glucose 4,6-dehydratase [Bacteroides helcogenes P 36-108] gi|319418080|gb|ADV45191.1| dTDP-glucose 4,6-dehydratase [Bacteroides helcogenes P 36-108] Length = 379 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 225/355 (63%), Gaps = 28/355 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ + I+V+++D LTYAGNL ++ F++ DICDR Sbjct: 5 LVTGAAGFIGANYIKYILAEHNDIKVVILDSLTYAGNLGTIAGDIDDERCVFVKGDICDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W + Sbjct: 65 VLADELFSRYKFDYVVNFAAESHVDRSIENPQLFLMTNILGTQNLLDAARRAWVTGKDES 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ TY Sbjct: 125 GYPTWRKGVRYHQVSTDEVYGSLGAEGYFTEHTPLCPHSPYSASKTSADMVVMAYHDTYK 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YGDG NVRDWLYVEDH +A+ LV Sbjct: 185 MPVTITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIV----FEIGFLL-----------------DALIPKSY 275 ++KG GE YN+GG+NE+ N++IV I L+ D I ++ Sbjct: 245 VRKGAEGEVYNVGGHNEKSNLEIVKLTISTIRRLMEEEPLYREVLKKKEKGSDGQIDINW 304 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + +LI F++DR GHD+RYAID +KI + +GW+P+ E+G+ KT+ WYL++ W Sbjct: 305 INEDLITFVKDRLGHDQRYAIDPTKITNALGWYPETKFETGIVKTIEWYLNHQDW 359 >gi|197124806|ref|YP_002136757.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. K] gi|196174655|gb|ACG75628.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. K] Length = 336 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 218/333 (65%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGG GFIGS L R L+ + +V+ +DKLTYAGN +L + S+ + F++ DI Sbjct: 1 MNVLLTGGCGFIGSNLVRLLLAERPGWRVVNLDKLTYAGNAENLAAVEGSSQYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + + + DA+++ AAESHVDRSIL FI TN+ GT +LLE R Sbjct: 61 GNGELVAEIFRTERIDAVMHLAAESHVDRSILAPAVFIDTNVRGTQVLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R+L +STDEVYGSL G F+E P +PSSPYSA+KASSD L LA+ HT+ +P Sbjct: 114 --EHGVKRYLHVSTDEVYGSLGPTGYFTETTPLDPSSPYSASKASSDLLALAYAHTFKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDW++VEDH R L L+ Sbjct: 172 VVVTRCSNNYGPYQFPEKLIPLMIANALRDLPLPVYGDGMNVRDWIHVEDHCRGLLAALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN+G ++ER NIDIV ++ L + P++ LI +++DR GHDRRYAID+ Sbjct: 232 HGHDGEVYNLGASSERHNIDIVKQV--LREVGKPET-----LIAYVKDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K ++++GW P+ E L TV WY ++ WW Sbjct: 285 TKARTKLGWAPRHRFEEALADTVRWYREHRPWW 317 >gi|46579775|ref|YP_010583.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. Hildenborough] gi|46449190|gb|AAS95842.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. Hildenborough] gi|311233566|gb|ADP86420.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris RCH1] Length = 340 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 217/335 (64%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQ 56 MRL+VTGG GFIG+ R+ L ++ V+ DKLTYAGN +L +I N +SF Sbjct: 1 MRLLVTGGCGFIGTNFIRHVLAVRPEVSVVNFDKLTYAGNPANLTDIEGEHGGNRYSFEH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R L+ DAIVNFAAE+HVDRSI + FITTN++GT +LL+ + Sbjct: 61 GDIADAGRVRDILERHAIDAIVNFAAETHVDRSINDSTPFITTNVLGTQVLLQ------A 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L + RF+ ISTDEVYG+L +GLF ED P P+SPYSA+KA +D +V A+ TY Sbjct: 115 ALDRGIP---RFVHISTDEVYGTLGPEGLFREDTPLAPNSPYSASKAGADLMVRAFHETY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + + CSNNYGPY FPEKLIPL + G + +YGDG NVRDW++VEDH R + L Sbjct: 172 GLDTVTTRCSNNYGPYQFPEKLIPLMYRKATAGEPLPVYGDGGNVRDWIHVEDHCRGVLL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+KGR G YN GG +ER N+D+V L+ L +S ELIRF++DRPGHDRRYA Sbjct: 232 ALEKGRPGGVYNFGGASERTNLDVV----RLILKLTGRS---EELIRFVKDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D + E+G+ P+ + E+GL TV WY N+ W Sbjct: 285 MDFTLAARELGYAPEHSFENGLAATVDWYRANDAW 319 >gi|85710314|ref|ZP_01041379.1| dTDP-glucose 4,6-dehydratase [Erythrobacter sp. NAP1] gi|85689024|gb|EAQ29028.1| dTDP-glucose 4,6-dehydratase [Erythrobacter sp. NAP1] Length = 350 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/350 (46%), Positives = 218/350 (62%), Gaps = 24/350 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG Y + + ++V+D LTYAGN ++++ + Q++L ++ DI D Sbjct: 4 LLVTGGAGFIGGNFVHYWADKHPEDAIVVLDALTYAGNRSTIEGVEQADL---IEGDIRD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + L+E + IV+FAAESHVDRSI G D FI TNI+GT LL+ R W L D Sbjct: 61 QELVEKLLREREIATIVHFAAESHVDRSISGPDAFIDTNILGTNSLLKAARAVW--LDGD 118 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF ISTDEVYGSL D FSE PY P+SPYSA+KASSD+LV A+ HT+G+ V Sbjct: 119 GMEH-RFHHISTDEVYGSLGADDPAFSETTPYAPNSPYSASKASSDHLVRAYHHTFGLDV 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +NCSNNYGPY +PEKLIPL + + G + +YGDG NVRDWL+VEDH R + L K Sbjct: 178 TTTNCSNNYGPYQYPEKLIPLFLLNALSGKSLPIYGDGMNVRDWLHVEDHCRGIEACLSK 237 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLL---------------DALIPKSYSHTELIRFI 284 G GE YNIGG E N+ ++ I + DA ++L F+ Sbjct: 238 GVPGETYNIGGGEELPNMAVIDAICAEVDRAFEEVDGLAERYPDAPAANGKPTSKLKTFV 297 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 DR GHDRRYAID +K + ++G+ + GL++T+ WYL N WW+PL Sbjct: 298 TDRAGHDRRYAIDETKARGDLGYAAERTFAEGLHQTLRWYLANEDWWQPL 347 >gi|109154774|emb|CAK50775.1| dTDP-glucose 4,6-dehydratase [Streptomyces argillaceus] Length = 331 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 216/337 (64%), Gaps = 21/337 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS R L+ + V V+DKLTYAG L +L E+S S+ F F++ DI Sbjct: 6 ILVTGGAGFIGSHYVRTLLGPRGVPDVTVTVLDKLTYAGTLTNLAEVSDSDRFRFVRGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + L D +V+FAAESHVDRSILGA +F+ TN+ GT LL+ + L Sbjct: 66 CDAPLVDDLLAVH--DQVVHFAAESHVDRSILGAADFVRTNVTGTQTLLD------AALR 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q + F+ ISTDEVYGS+D G + E P +P+S YSA KASSD + LA+ T+G+ V Sbjct: 118 QGIET---FVHISTDEVYGSIDAGSWPETAPVSPNSLYSAAKASSDLVALAYHRTHGLDV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYG + FPEK+IPL +T +++G V LYGDG NVRDWL+V+DHVRA+ LV Sbjct: 175 RVTRCSNNYGSHQFPEKVIPLFVTSLLDGREVPLYGDGTNVRDWLHVDDHVRAIELVRTG 234 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N ++ LLDA + + +R++ DR GHDRRY++D + Sbjct: 235 GRAGEVYNIGGGTELSNKELT---QLLLDA----CGAGWDRVRYVTDRKGHDRRYSVDCT 287 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 KI+ E+G+ P L +TV WY + WW PL + Sbjct: 288 KIRRELGYRPAREFGDALAETVAWYRHHRAWWEPLTR 324 >gi|110333709|gb|ABG67702.1| dTDP-glucose-4,6-dehydratase [Streptomyces mycarofaciens] Length = 326 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 217/343 (63%), Gaps = 27/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 R++VTGGAGFIGS L+N K +V+V+D LTYAGNL +L + + Sbjct: 2 QRILVTGGAGFIGSRFVNALLNGSLPEFGKPEVVVLDALTYAGNLANLAPVGDCGGLRVV 61 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICDR + AL D +V+FAAESHVDRSI AD F+ TN++GT +LL E Sbjct: 62 AWDICDRSTV--ALAMAGADLVVHFAAESHVDRSIDDADAFVRTNVLGTHVLLREAL--- 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ +STDEVYGS+ +G +SED P +P+SPY+A+KA+SD L LA+ T+ Sbjct: 117 ------AVRPGRFVHVSTDEVYGSIPEGSWSEDHPLSPNSPYAASKAASDQLALAFHRTH 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY +PEK+IPL ++ +++G+ V LYGDG N RDWL+V+DH R + L Sbjct: 171 GLPVCVTRCSNNYGPYQYPEKIIPLFVSNLLDGAAVPLYGDGGNRRDWLHVDDHCRGIAL 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--LIRFIEDRPGHDRR 293 V + GR + YNIGG E N ++ P T+ +R + DR GHDRR Sbjct: 231 VARGGRPAKVYNIGGGTELTNTELTER---------PAEAVRTDWSAVREVPDRKGHDRR 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 Y++D +KI +E+G+ P+ ++ GL +TV WY +N WW+PL K Sbjct: 282 YSVDYAKIANELGYAPRIGIDEGLAETVRWYRENRAWWKPLKK 324 >gi|304383982|ref|ZP_07366438.1| dTDP-glucose 4,6-dehydratase [Prevotella marshii DSM 16973] gi|304334874|gb|EFM01148.1| dTDP-glucose 4,6-dehydratase [Prevotella marshii DSM 16973] Length = 382 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 170/362 (46%), Positives = 222/362 (61%), Gaps = 39/362 (10%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIGS +YL++ + I+V+ +D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGSNFIKYLLHKRYQNEDIKVVALDALTYAGNLGTIKDDIDGKRCIFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC-- 117 DRE E D +VNFAAESHVDRSI F+ TNI+GT LL+ R W+ Sbjct: 65 RDRELTDRLFAENDIDYVVNFAAESHVDRSIEDPQLFLETNILGTQNLLDAARRAWNTGK 124 Query: 118 -------LSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 QDK RF Q+STDEVYG+L + G F+E P P SPYSA+K S+D +V+ Sbjct: 125 GADGYPTWKQDK----RFHQVSTDEVYGTLGETGYFTEQTPLCPHSPYSASKTSADMIVM 180 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ T+ IPV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G+NVRDWLYVEDH Sbjct: 181 AYHDTFRIPVSITRCSNNYGPYHFPEKLIPLIINNILEGKPLPVYGKGENVRDWLYVEDH 240 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHT--------- 278 +A+ LV++KGR G+ YN+GG+NE KNIDIV I + ++ KS H Sbjct: 241 CKAIDLVVRKGREGQVYNVGGHNEMKNIDIVKLIIRNIHDMMAADKSLRHVLKKQEQDAN 300 Query: 279 ----------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 LI F+ DR GHD RYAID SKI +E+GW P+ G+ KT+ W L+N Sbjct: 301 GEIAIDWINESLITFVTDRLGHDLRYAIDPSKISAELGWLPETKFADGIVKTIRWNLENQ 360 Query: 329 WW 330 W Sbjct: 361 PW 362 >gi|144901295|emb|CAM78159.1| DTDP-glucose 4,6-dehydratase [Magnetospirillum gryphiswaldense MSR-1] Length = 341 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 205/333 (61%), Gaps = 10/333 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIGSALCR L V+ +D+L YA L+SL + F+Q DI Sbjct: 1 MSILVTGAAGFIGSALCRQLTARGDETVIALDRLGYAACLHSLPAQA-----VFIQADIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +P A+ + AAE+HVDRSI EFI N++GTF LLE TR +W + Sbjct: 56 DGTALDAVFARHRPRAVFHLAAETHVDRSIDTPIEFIEHNMVGTFQLLEATRRFWG--GR 113 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D FRF+ +STDEV+GSLD + F+ PY P+SPYSA+KA++D+L AW TYG+P Sbjct: 114 GRPDDFRFVHVSTDEVFGSLDADEPAFTASSPYRPNSPYSASKAAADHLARAWMATYGLP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++NCSNNYGP+ FPEKL+PL I + + G + LYGDG N RDWLYV+DH L L Sbjct: 174 VIVTNCSNNYGPWQFPEKLMPLVIQKALAGHPLPLYGDGGNRRDWLYVDDHAAGLMAALD 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAID 297 G G Y G E N+++V I LD P + LI+F+ DRPGHDRRY ID Sbjct: 234 HGEPGGTYLFGSGREHSNLEVVKAICAQLDQWRPDPVGPYARLIQFVTDRPGHDRRYGID 293 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S + + W P+ + G+N T+ W LD+ W Sbjct: 294 PSHARRALDWQPRTDFADGINATIRWCLDHPHW 326 >gi|260890571|ref|ZP_05901834.1| dTDP-glucose 4,6-dehydratase [Leptotrichia hofstadii F0254] gi|260859813|gb|EEX74313.1| dTDP-glucose 4,6-dehydratase [Leptotrichia hofstadii F0254] Length = 401 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/378 (43%), Positives = 231/378 (61%), Gaps = 52/378 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y++N K I+V+V+D LTYAGNL ++ E + F +VDI Sbjct: 5 LVTGAAGFIGANYLKYILNKYKNDEIKVIVVDVLTYAGNLGTIAEEIKDKRVKFEKVDIR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I E + D +VNFAAESHVDRSI F+ TNI+GT LLE + W+ +S+ Sbjct: 65 DQKEIARIFSENEIDFVVNFAAESHVDRSIENPQIFLETNILGTQNLLENAKKAWT-VSK 123 Query: 121 DK------KDQFRFLQISTDEVYGSLDK------------------------------GL 144 D+ ++ ++LQ+STDEVYGSL K Sbjct: 124 DENGYPVYREGVKYLQVSTDEVYGSLSKDYDTAIDLVIDDEEVKKVVKNRTNLKTYGKNF 183 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+E +P SPYSA+KAS+D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I Sbjct: 184 FTEKTSLDPRSPYSASKASADHIVIAYGETYKMPINITRCSNNYGPYHFPEKLIPLMIKN 243 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 ++EG + +YG G NVRDWLYVEDH + + LVL+ I E YNIGG NE +NI+IV + Sbjct: 244 VLEGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLRNADIYEIYNIGGFNEEQNINIVKLVI 303 Query: 265 FLLDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 +L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + Sbjct: 304 DILKEEIENNDKYKKVLKTDLQNINYDLITYVQDRLGHDMRYAINPSKIARDLGWYPETD 363 Query: 313 MESGLNKTVCWYLDNNWW 330 E+G+ KTV WYL++ W Sbjct: 364 FETGIRKTVKWYLEHQDW 381 >gi|288559368|ref|YP_003422854.1| dTDP-glucose 4,6-dehydratase RfbB1 [Methanobrevibacter ruminantium M1] gi|288542078|gb|ADC45962.1| dTDP-glucose 4,6-dehydratase RfbB1 [Methanobrevibacter ruminantium M1] Length = 335 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 164/331 (49%), Positives = 226/331 (68%), Gaps = 20/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS +Y+++ +++ +D LTY GNL +L++I + +SF++ +I Sbjct: 3 KILVTGGAGFIGSNFIKYMLDKYPDYEIVNLDALTYCGNLENLEDIEDNPNYSFVKGNIM 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + IVNFAAESHVDRSI FI +NIIGT +LL+ + Q Sbjct: 63 DEGLVDVVVSSVD--YIVNFAAESHVDRSIEDPQIFIKSNIIGTQVLLDAAYKY-----Q 115 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FLQ+STDEVYGSL +G F+E P +SPYSA+KA +D +V A+G T+ +P+ Sbjct: 116 IKK----FLQVSTDEVYGSLGPEGYFTETTPLQANSPYSASKAGADLMVRAYGETFDLPI 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY FPEKLIPL I+ +E + +YGDG+N+RDWL+V DH A+ LVL K Sbjct: 172 NITRCSNNYGPYQFPEKLIPLMISNALEDKELPIYGDGKNIRDWLHVYDHCSAIDLVLHK 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+IGE YNIGG+NE++NI+IV I LD P+S LI+F++DR GHDRRYAIDS+ Sbjct: 232 GKIGEVYNIGGHNEKQNIEIVKLILKELDK--PES-----LIKFVKDRLGHDRRYAIDST 284 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI E+GW P+ E+G+ +T+ WYLDN W Sbjct: 285 KITEELGWKPKYTFETGIVETIHWYLDNQDW 315 >gi|317130376|ref|YP_004096658.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315475324|gb|ADU31927.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 332 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 152/337 (45%), Positives = 221/337 (65%), Gaps = 21/337 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIG +Y+V ++ +D LTYAG L K I + + + F+++DI Sbjct: 5 KVLVTGGAGFIGGNFVQYMVKKFPHYEIYNLDLLTYAGELFKHKNIEEYSNYHFIKLDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + + D +V+FAAESHVDRSI + F+ TN++GT +LL+ + Sbjct: 65 DREKVMKYFESEKFDFVVHFAAESHVDRSITDPEVFVRTNVMGTQVLLDAAK-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +FL +STDEVYG LD F+ED P P+SPYSA+KA+SD LV ++ T+G+ Sbjct: 117 -EHSVSKFLHVSTDEVYGELDFNPNTFFTEDTPLQPNSPYSASKAASDLLVRSYHETFGL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV ++ CSNNYGPYHFPEKLIPL I+R++ V +YGDG+N+RDWL+V DH A+ LVL Sbjct: 176 PVNITRCSNNYGPYHFPEKLIPLTISRVLNDQKVPVYGDGKNIRDWLHVLDHCSAIDLVL 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G GE YNIGG+NE+ N+++V +I +LI F+ DR GHD+RYAID Sbjct: 236 HEGSNGEVYNIGGHNEKTNLEVV-------KTIINTLGKSEDLIEFVTDRLGHDKRYAID 288 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SK++ +GW P+ N ++G+ +T+ WY+ N WW+ + Sbjct: 289 PSKLE-RLGWKPKYNFDTGIKQTIEWYVQNKDWWQTI 324 >gi|256843716|ref|ZP_05549204.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus 125-2-CHN] gi|256615136|gb|EEU20337.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus 125-2-CHN] Length = 326 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 174/335 (51%), Positives = 219/335 (65%), Gaps = 27/335 (8%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D LTYAGNL++LK + + F F ++DICDRE + +E +PD +VNFAAESHVD Sbjct: 10 IICLDSLTYAGNLSTLKSVMDNPHFKFAKLDICDREGVYKLFEEEKPDVVVNFAAESHVD 69 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL--DKG-- 143 RSI + F+ TNIIGT +L++ R K D RF Q+STDEVYG L D+ Sbjct: 70 RSIENPEIFLETNIIGTSVLMDACR---------KYDIKRFHQVSTDEVYGDLPLDRPDL 120 Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT 203 F ED P + SSPYS++KAS+D LV A+G TYG+PV +S CSNNYGPY FPEKLIPL I Sbjct: 121 FFHEDTPLHTSSPYSSSKASADLLVGAYGRTYGLPVTISRCSNNYGPYQFPEKLIPLIIQ 180 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 R + + +YGDG+NVRDWLYVEDH +A+ L+L+KG+ GE YNIGG+NE NIDIV I Sbjct: 181 RALNNEKLPVYGDGKNVRDWLYVEDHCKAIDLILEKGKPGEIYNIGGHNEMHNIDIVKLI 240 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 LD K YS LI + DR GHDRRYAID KI E+GW P+ + G+ KT+ W Sbjct: 241 CDYLD----KPYS---LIEHVTDRKGHDRRYAIDPDKIHKELGWLPETMFKDGIKKTIQW 293 Query: 324 YLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNRK 358 YLDN WW + DY + EM NRK Sbjct: 294 YLDNKEWWENIIS-----GDYQNY--YEEMYGNRK 321 >gi|317503676|ref|ZP_07961693.1| dTDP-glucose 4,6-dehydratase [Prevotella salivae DSM 15606] gi|315665197|gb|EFV04847.1| dTDP-glucose 4,6-dehydratase [Prevotella salivae DSM 15606] Length = 382 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 172/385 (44%), Positives = 231/385 (60%), Gaps = 38/385 (9%) Query: 4 IVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+ D I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLYRKYKDQDIRVIILDALTYAGNLGTIKDDIDDKRCVFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---- 115 DRE + E D +VNFAAESHVDRSI F+ NI+GT LL+ R W Sbjct: 65 RDRELVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLNVNILGTQNLLDAARRAWVTGK 124 Query: 116 -SCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 C K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ Sbjct: 125 DECGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADLFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+ +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TFHMPVTITRCSNNYGPYHFPEKLIPLMINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPK---------- 273 LV+++GR GE YN+GG+NE NI+IV E L +++ K Sbjct: 245 DLVVREGREGEIYNVGGHNEMTNINIVKLTIKTIHDMMEADKDLRSVLKKKVKDAQGDWD 304 Query: 274 -SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + +LI + DR GHD+RYAID +KIK E+GW+P+ G+ KT+ W LDN W Sbjct: 305 ISWINNDLITHVTDRLGHDQRYAIDPTKIKEELGWYPETRFTDGIVKTIKWNLDNQQWIE 364 Query: 333 PLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 365 EV-----TSGDYQKY--YAEMYGNR 382 >gi|299141426|ref|ZP_07034563.1| dTDP-glucose 4,6-dehydratase [Prevotella oris C735] gi|298577386|gb|EFI49255.1| dTDP-glucose 4,6-dehydratase [Prevotella oris C735] Length = 382 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 170/385 (44%), Positives = 232/385 (60%), Gaps = 38/385 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHRKYKEQDIRVIILDALTYAGNLGTIKDDIDGKRCIFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + E D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RDRKLVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D V+A+ Sbjct: 125 DAQGYPTWKPGKRYHQVSTDEVYGSLGAEGYFTEKTPLCPHSPYSASKTSADMFVMAYHD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +P ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPTTITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPK---------- 273 LV+++GR GE YN+GG+NE NIDIV E L +++ K Sbjct: 245 DLVVREGREGEVYNVGGHNEMTNIDIVKLTIKTIHDMMEADKSLRSVLKKKVEDAQGDLD 304 Query: 274 -SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + +LI + DR GHD+RYAID +KIK E+GW+P+ G+ KT+ W LDN W Sbjct: 305 ISWINNDLITHVTDRLGHDKRYAIDPTKIKEELGWYPETKFADGIVKTIKWNLDNQQWIE 364 Query: 333 PLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 365 EV-----TSGDYQKY--YAEMYGNR 382 >gi|167748149|ref|ZP_02420276.1| hypothetical protein ANACAC_02893 [Anaerostipes caccae DSM 14662] gi|167652141|gb|EDR96270.1| hypothetical protein ANACAC_02893 [Anaerostipes caccae DSM 14662] Length = 345 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 164/337 (48%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG ++VN +++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKILVTGGAGFIGGNFVHHMVNKYPNDEIVNLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I ++ Q D +VNFAAESHVDRSI F+TTN++GT +LL+ ++ Sbjct: 61 ADEAFIMDLFEKEQFDMVVNFAAESHVDRSITDPGIFVTTNVMGTRVLLDASK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+ED P + SSPYS++KAS+D VLA+ TY Sbjct: 114 --KYGVKRYHQVSTDEVYGDLPLDRPDLFFTEDTPLHTSSPYSSSKASADLFVLAYYRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLIISRALADEELPVYGKGENVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KG+ GE YN+GG+NER N+++V I LD P+S LI+F+ DRPGHD RYA Sbjct: 232 ILHKGKPGEVYNVGGHNERTNLEVVQTILKALDK--PES-----LIKFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +KI++E+GW P+ ++G+ +T+ WYL+N WW+ Sbjct: 285 IDPAKIETELGWKPKYTFDTGIRQTIEWYLNNKEWWQ 321 >gi|134102913|ref|YP_001108574.1| dTDP-glucose 4,6-dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|291008001|ref|ZP_06565974.1| dTDP-glucose 4,6-dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|567874|gb|AAA68211.1| thymidine diphosphoglucose 4,6-dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|133915536|emb|CAM05649.1| dTDP-glucose 4,6-dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 329 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 219/339 (64%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ V+V+DKLTYAGN +L+ ++ F F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRQLLGGAYPAFAGADVVVLDKLTYAGNEENLRPVADDPRFRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DIC+ + + ++E D +V+FAAE+HVDRSILGA +F+ TN++GT LL+ Sbjct: 61 RGDICEWDVVSEVMREV--DVVVHFAAETHVDRSILGASDFVVTNVVGTNTLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L+ + +F+ +STDEVYG+++ G + ED P+SPYSA KA SD + A+ T+ Sbjct: 113 GALAANVS---KFVHVSTDEVYGTIEHGSWPEDHLLEPNSPYSAAKAGSDLIARAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEK++PL IT +++G V LYGDG NVRDWL+V DH R + L Sbjct: 170 GLPVCITRCSNNYGPYQFPEKVLPLFITNLMDGRRVPLYGDGLNVRDWLHVTDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V + GR GE YNIGG E N ++ + L+ + +S +++ + DR GHDRRY+ Sbjct: 230 VAESGRAGEIYNIGGGTELTNKELTERV----LELMGQDWS---MVQPVTDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI E+G+ P E GL +T+ WY DN WW PL Sbjct: 283 VDHTKISEELGYEPVVPFERGLAETIEWYRDNRAWWEPL 321 >gi|195953942|ref|YP_002122232.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933554|gb|ACG58254.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 330 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 156/340 (45%), Positives = 225/340 (66%), Gaps = 20/340 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGS R V +++V+DKLTYAG+L LKE+ ++ +F + DI Sbjct: 1 MKLLVTGGAGFIGSEFVRKAVKR-GYEIVVVDKLTYAGDLERLKEVKEN--ITFYKADIT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E I K +P +++FAAESHVDRSIL A FI TN+ GT +LL+ +++ Sbjct: 58 NKEFIEHIFKTEKPKVVIHFAAESHVDRSILDASPFIKTNVEGTQVLLD--------VAK 109 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + +F+ I+TDEVYG L +G F ED P P+SPYS++KA++D L A+ TY +PV Sbjct: 110 DIGVE-KFINIATDEVYGELGQEGTFKEDSPLVPNSPYSSSKAAADMLGRAYYKTYKLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYGP+ +PEKLIP+ I + + + +YG GQNVR+WLYV D A++ +++K Sbjct: 169 ITVRPSNNYGPWQYPEKLIPVVILKALNNEKIPVYGTGQNVREWLYVSDCAEAIFEIMEK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+IGE YN+G N ER+NID+V I LL + + +LI F++DRPGHD RY++ ++ Sbjct: 229 GKIGEIYNVGSNQERRNIDVVKNILKLL-------HKNEDLIEFVKDRPGHDFRYSLGTT 281 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KIK+E+GW + E G+ KTV WY++N W K LK Sbjct: 282 KIKNELGWEAKTTFEEGIEKTVKWYIENMAWVEKKLKYLK 321 >gi|220919522|ref|YP_002494826.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957376|gb|ACL67760.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 336 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 216/333 (64%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGG GFIGS L R L+ + +V+ +DKLTYAGN +L + S+ + F++ DI Sbjct: 1 MNVLLTGGCGFIGSNLVRLLLAERPGWRVVNLDKLTYAGNAENLAAVEGSSQYRFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + + + D +++ AAESHVDRSIL FI TN+ GT +LLE R Sbjct: 61 GNGELVAEIFRTERIDVVMHLAAESHVDRSILAPAVFIDTNVRGTQVLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL +STDEVYGSL G F+E P +PSSPYSA+KASSD L LA+ HT+ +P Sbjct: 114 --QHGVKRFLHVSTDEVYGSLGPTGYFTETTPLDPSSPYSASKASSDLLALAYAHTFKLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDW++VEDH R L L+ Sbjct: 172 VVVTRCSNNYGPYQFPEKLIPLMIANALRDLPLPVYGDGMNVRDWIHVEDHCRGLLAALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YN G ++ER NIDIV ++ L P++ LI +++DR GHDRRYAID+ Sbjct: 232 HGHDGEVYNFGASSERHNIDIVKQV--LRHVGKPET-----LITYVKDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +K ++++GW P+ E L +TV WY ++ WW Sbjct: 285 TKARTKLGWAPRHRFEDALGETVRWYREHRPWW 317 >gi|88855652|ref|ZP_01130315.1| thymidine diphosphoglucose 4,6-dehydratase [marine actinobacterium PHSC20C1] gi|88814976|gb|EAR24835.1| thymidine diphosphoglucose 4,6-dehydratase [marine actinobacterium PHSC20C1] Length = 327 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M+++VTGGAGFIGS R + D V+V+D LTY+GNL +L ++ S + F+ Sbjct: 1 MKILVTGGAGFIGSNFVRRTIEDTYPGLAGADVVVLDALTYSGNLENLAPVANSPRYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D + + + L + DAIV+FAAESHVDRS+ A F+ TN++GT LL+ Sbjct: 61 EGDIRDADLLDTLLVDI--DAIVHFAAESHVDRSVRDASAFVETNVLGTQRLLDAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYGS+ +G + E P P+SPYSA+KA SD L ++ T+ Sbjct: 116 ------RAKTPRFVHVSTDEVYGSIAEGSWDEQRPLEPNSPYSASKAGSDLLARSYFRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + ++ CSNNYGPYHFPEKLIPL +T +I+G HV LYG+G NVRDWL+V+DH R + L Sbjct: 170 GLNLSITRCSNNYGPYHFPEKLIPLFVTNLIDGKHVPLYGEGNNVRDWLHVDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ GR GE YNIGG E N + L L+ + + + +EDR GHD RY+ Sbjct: 230 VVSGGRAGEIYNIGGGTELTNKE-------LTQLLLDHTGTDWSFVDRVEDRLGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI+SE+G+ PQ ESGL V WY DN WW PL Sbjct: 283 VDISKIQSELGYEPQVPFESGLADVVQWYRDNRQWWEPL 321 >gi|260591003|ref|ZP_05856461.1| dTDP-glucose 4,6-dehydratase [Prevotella veroralis F0319] gi|260536868|gb|EEX19485.1| dTDP-glucose 4,6-dehydratase [Prevotella veroralis F0319] Length = 384 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 165/378 (43%), Positives = 234/378 (61%), Gaps = 36/378 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYINEDIKVIILDALTYAGNLGTIKDNIDEKRCIFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + E D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRELVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ K R+ Q+STDEVYGSL +G F+E+ P P SPYSA+K S+D+ V+A+ Sbjct: 125 DEQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMKNIDIVKLTIKTIHDMMAEDKNLRTILKKQVKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S+ + +LI + DR GHD RYAID +KIK E+GW+P+ G+ KT+ W L++ W + Sbjct: 305 ISWINNDLITHVPDRLGHDARYAIDPTKIKEELGWYPETKFADGIVKTIRWNLEHQNWIQ 364 Query: 333 PLYKELKPDNDYSKWKNL 350 + DY K+ ++ Sbjct: 365 EV-----TSGDYQKYYDM 377 >gi|260061274|ref|YP_003194354.1| dTDP-glucose 4-6-dehydratase [Robiginitalea biformata HTCC2501] gi|88785406|gb|EAR16575.1| dTDP-glucose 4-6-dehydratase [Robiginitalea biformata HTCC2501] Length = 343 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 210/327 (64%), Gaps = 5/327 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS YL + ++ +DKLTYAG+L++L ++ + F+Q DI D Sbjct: 11 ILITGGAGFIGSNFIHYLALERPDWHIVNLDKLTYAGSLDNLDGLNPDFQYDFIQGDITD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + D IV+FAAESHVD SI + F+ +N++GTF LLE R WW + Sbjct: 71 GGLLNRLHRRYHFDGIVHFAAESHVDNSIASPETFVMSNVMGTFTLLEAARKWWMPKGRS 130 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 Q RFL ISTDEV+G L K G+FSE PY P+SPYSA+KA SD+LV ++ TYG+ + Sbjct: 131 AC-QGRFLHISTDEVFGELGKTGVFSETSPYRPNSPYSASKAGSDHLVRSYVKTYGMDCI 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP EK IP I + G + +YGDG N+RDWL+V+DH AL + + Sbjct: 190 TTNCSNNYGPRQHREKFIPTVINTAMTGKEIPIYGDGSNIRDWLFVKDHCEALLGIFEYS 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAIDS 298 GE Y IG NNE+ N+D+ I LD ++P S+T+ IRF+EDRPGHD RYA+D Sbjct: 250 DPGEHYLIGANNEQNNLDLARLICQKLDEIVPSLGGKSYTDQIRFVEDRPGHDIRYAVDH 309 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 SK+ E+GW P ESGL +T+ WY+ Sbjct: 310 SKLTGELGWKPVTTFESGLTETIHWYI 336 >gi|45250013|gb|AAS55726.1| dTDP-glucose 4,6-dehydratase [Aneurinibacillus thermoaerophilus] Length = 343 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 161/331 (48%), Positives = 223/331 (67%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y + +++ +D LTYAG+LN+L+E+ + F++ DI + Sbjct: 10 ILVTGGAGFIGSNFIPYFLEKYNNYRIINLDALTYAGSLNNLQEVEHHPRYKFVKGDINN 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS-- 119 R+ + ++F +++FAAESHVD SI G D FI TN+ GTF LLE R +W Sbjct: 70 RQLLEYLFEQFNIKGVIHFAAESHVDNSIKGPDIFIETNVKGTFTLLETARKFWMIAPFK 129 Query: 120 -QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ +Q RF ISTDEVYG+L ++G F+E+ PY P+SPYS++KASSD +V ++ HTYG+ Sbjct: 130 YREGYEQCRFHHISTDEVYGTLGEEGYFTEETPYAPNSPYSSSKASSDMIVRSYFHTYGL 189 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+ +NCSNNYGP EKLIP I + + H+ +YGDG+NVRDWLYV DH +A+ V Sbjct: 190 NVVTTNCSNNYGPKQHDEKLIPTVIRKALANEHIPIYGDGKNVRDWLYVLDHCQAIDAVY 249 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYA 295 +G GE YNIG NE+ N+ I I LLD + P K S+ ELI ++DRPGHDRRYA Sbjct: 250 HRGVCGEVYNIGSRNEQNNLQIAHMICELLDRMKPIAKGRSYKELITLVQDRPGHDRRYA 309 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ID KI++++GW +EN E G+ KTV WYL+ Sbjct: 310 IDPKKIETQLGWKAEENFEDGIRKTVQWYLN 340 >gi|23099875|ref|NP_693341.1| spore coat polysaccharide synthesis [Oceanobacillus iheyensis HTE831] gi|22778106|dbj|BAC14376.1| spore coat polysaccharide synthesis (dTDP-glucose 4,6-dehydratase) (EC 4.2.1.46) [Oceanobacillus iheyensis HTE831] Length = 345 Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 150/331 (45%), Positives = 224/331 (67%), Gaps = 10/331 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y ++ ++ ++ IDKLTYAG+L +LK I ++ + F++ DI D Sbjct: 6 ILITGGAGFIGSNFIHYFMDVYPEVPIVNIDKLTYAGSLQNLKGIDSNSNYHFVEGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ + F +++FAAESHVDRSI A F+ TN++GT LL+ R W + Sbjct: 66 EQVVQHVFQNFDIHGVIHFAAESHVDRSIEDARSFVDTNVVGTLNLLQAARNDWE--EKG 123 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + RF ISTDEVYGSL ++G+F+E+ PY+P +PYSA+KA ++ +V ++G+TYG+ V+ Sbjct: 124 ELEGRRFHHISTDEVYGSLGEEGMFTEETPYDPRNPYSASKAGANLMVKSFGYTYGMNVI 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LS+ SNNYGP EKL+P I + + G + +YGDG+NVRDWLYVEDH RA+ V G Sbjct: 184 LSSSSNNYGPRQHQEKLLPTIIEKALSGKEIPIYGDGKNVRDWLYVEDHCRAIDTVYHFG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE------LIRFIEDRPGHDRRY 294 + E YN+GG NER N+++ +I +L+ L P S E LI F+EDR GHD RY Sbjct: 244 KSQETYNVGGRNERTNLEMTNQICDILNDLRPDLLSKYELEKFQDLITFVEDRRGHDLRY 303 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 AID K+++E+ W P++ +E+GL +T+ WY+ Sbjct: 304 AIDDRKLRNELQWEPKQTLENGLKQTIEWYI 334 >gi|302542503|ref|ZP_07294845.1| dTDP-glucose 4,6-dehydratase [Streptomyces hygroscopicus ATCC 53653] gi|302460121|gb|EFL23214.1| dTDP-glucose 4,6-dehydratase [Streptomyces himastatinicus ATCC 53653] Length = 327 Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 160/339 (47%), Positives = 215/339 (63%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSA R L++ V V+DKLTYAGN +L + + F+ Sbjct: 1 MRILVTGGAGFIGSAYVRTLLDGGYAGYEDASVTVLDKLTYAGNRTNLP--AHHDRLDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICD +R L DA+VNFAAESHVDRSI F+ TN++GT LLE Sbjct: 59 QGDICDAGLLRELLPGH--DAVVNFAAESHVDRSIEDPSAFVRTNVLGTQTLLE------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 CL + R + ISTDEVYGS+++G ++E+ P P+SPY+A+KAS D + ++ T+ Sbjct: 111 GCLLSGVE---RVVHISTDEVYGSIERGAWTEEWPLAPNSPYAASKASGDLIARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEKLIPL +T ++ G+ V LYGDG NVR+W++V+DH + L Sbjct: 168 GLDVSITRCSNNYGPHQHPEKLIPLFVTSLLSGATVPLYGDGSNVREWVHVQDHCAGIQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG NER N I DAL+ + +L+R + DR GHD RYA Sbjct: 228 VLSGGRAGEVYHIGGGNERTNRQIT-------DALLELCGASGDLVRQVADRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D KI++E+G+ P + E GL V WY DN WW+PL Sbjct: 281 LDDGKIRAELGYAPAVDFERGLADVVAWYGDNPAWWKPL 319 >gi|116495515|ref|YP_807249.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] gi|116105665|gb|ABJ70807.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 220/338 (65%), Gaps = 19/338 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS Y ++V +D LTYAGN N+L ++ F+Q +I + Sbjct: 1 MLITGGAGFIGSNFVHYQRQMHPADLIVNLDLLTYAGNKNNLTDLKHDPSHIFVQGNINN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + ++++ DAIVNFAAESHVDRSIL + F+ TN+ GT LL E Sbjct: 61 RELVAYLIEQYHIDAIVNFAAESHVDRSILHPEIFVETNVKGTLALLHEAH--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + LQISTDEVYGSL G F+ED P P+SPY+A+KAS+D LV ++ TYG V Sbjct: 112 -RHDIKLLQISTDEVYGSLGPTGYFTEDSPLQPNSPYAASKASADMLVRSYFETYGTHVN 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +NN+GPY FPEKLIPL ITR ++G + +YGDG+N+RDWLYV D+ R + LVL++G Sbjct: 171 ITRSTNNFGPYQFPEKLIPLMITRGLDGEKLPIYGDGKNIRDWLYVRDNCRGIDLVLREG 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + G+ YNIG +NE N IV I L +P+S I +++DRPGHDRRYAID +K Sbjct: 231 KTGQIYNIGAHNEYDNNTIVQLIVKQLG--LPESQ-----ITYVKDRPGHDRRYAIDPTK 283 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 I E+GW P+ N +GL++T WY + WW+PL ++ Sbjct: 284 ILDELGWRPESNFRTGLDETFGWYAVHQDWWQPLKDKM 321 >gi|170756139|ref|YP_001781617.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B1 str. Okra] gi|169121351|gb|ACA45187.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B1 str. Okra] Length = 326 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYKLEEGIKETIKWYKNNQTWW 324 >gi|225352533|ref|ZP_03743556.1| hypothetical protein BIFPSEUDO_04156 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156727|gb|EEG70121.1| hypothetical protein BIFPSEUDO_04156 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 341 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 208/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIG+ RY+ N +++ V+DKLTYAGN ++ + QS + +Q DICD Sbjct: 12 IIVTGGCGFIGANFVRYVAHNHPDVRITVLDKLTYAGNPQNIAGLPQSQV-ELVQGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FITTN+ GTF LLE R Sbjct: 71 AALLERIVPGH--DAIVHFAAESHNDNSIANPEPFITTNVEGTFHLLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+E PY PSSPYSA+KA+SD LV AW TYG+ Sbjct: 120 -KHDVRFHHISTDEVYGDLALDDPCKFTESTPYKPSSPYSASKAASDQLVRAWVRTYGLR 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH A++ +L Sbjct: 179 ATISNCSNNYGPYQHVEKFIPRQITSIMEGVRPKLYGTGENVRDWIHTEDHSSAVWKILT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ + ++ DRPGHDRRYAIDS Sbjct: 239 RGRIGETYLIGADGEMSNIAVMRMILRLMGCA-------EDAFDWVRDRPGHDRRYAIDS 291 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + + E+GL T+ WY N WW P Sbjct: 292 SKLRTELGWKPVRTDFEAGLQATIAWYAANRAWWEP 327 >gi|311747303|ref|ZP_07721088.1| dTDP-glucose 4,6-dehydratase [Algoriphagus sp. PR1] gi|126579017|gb|EAZ83181.1| dTDP-glucose 4,6-dehydratase [Algoriphagus sp. PR1] Length = 351 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 209/331 (63%), Gaps = 7/331 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + + V Q+ +D LTYAGNL +LKEI ++ + FL+ DI D Sbjct: 5 ILITGGAGFIGSHVVKLFVEKYPDYQIFNLDALTYAGNLENLKEIEGASNYHFLKADIQD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + +++ AAESHVDRSI F+ TN+ GT LL + W Sbjct: 65 AETLDEIFSNYGITDVIHLAAESHVDRSISDPLAFVKTNVFGTVNLLNSAKKAWG----K 120 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D+ F +STDEVYGSL D G F E Y+P SPYSA+KASSD+ V A+ +TY + + Sbjct: 121 ELDKHLFYHVSTDEVYGSLEDGGFFLESTSYDPQSPYSASKASSDHFVRAYANTYKMRTV 180 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGP HFPEKLIPL I + + +YG G+N+RDWL+V+DH RA+ V G Sbjct: 181 ISNCSNNYGPNHFPEKLIPLCIHNIKNNKALPVYGKGENIRDWLFVKDHARAIDTVFHSG 240 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 + G+ YNIGG NE KNIDIV + +D + + +E LI F+ DR GHD RYAID+S Sbjct: 241 KAGDTYNIGGFNEWKNIDIVRLLCQKMDEKLGREKGTSEKLITFVTDRAGHDMRYAIDAS 300 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KIK E+GW P E G+ T+ WYL+N W Sbjct: 301 KIKDELGWEPSLQFEEGIELTIDWYLNNQEW 331 >gi|226949349|ref|YP_002804440.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] gi|226843161|gb|ACO85827.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] Length = 326 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYTLEEGIKETIEWYKNNQTWW 324 >gi|254168058|ref|ZP_04874906.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] gi|289595934|ref|YP_003482630.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] gi|197623101|gb|EDY35668.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] gi|289533721|gb|ADD08068.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] Length = 334 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 217/334 (64%), Gaps = 18/334 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS YL+N + I+++ D L+Y NL +L+++ + + F++ DI Sbjct: 3 KILVTGGAGFIGSNCIHYLLNKYEDIEIVNYDVLSYGSNLENLRDVEKDKRYKFIKGDIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + +K + I+NFAAE+HVDRSI FI TN++G LLE R Sbjct: 63 DREKLEEVIKSEEIAYIINFAAETHVDRSISSPLSFINTNVVGVATLLEMAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D R + ISTDEVYG + +G F E +PSSPYSA+KAS+D +V ++ TYGI + Sbjct: 115 -KYDIDRLVHISTDEVYGDIVEGSFKEGDRLSPSSPYSASKASADLIVKSYVRTYGIDAV 173 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIP I R ++G + +YG G+ VRDW++VEDH R + LVL+KG Sbjct: 174 ITRCSNNYGPYQFPEKLIPKTIIRALKGLKIPVYGTGKQVRDWIFVEDHCRGIDLVLQKG 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNI N E++NI++V +I L + ++I ++EDRPGHD RY++++ K Sbjct: 234 SKGEIYNIASNEEKENIEVVRKILAYLG-------KNEDMIEYVEDRPGHDVRYSLNTEK 286 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 I++ +GW P N + GL V WY+ N WWW+PL Sbjct: 287 IRN-LGWKPVYNFDEGLKYVVEWYVKNEWWWKPL 319 >gi|153939157|ref|YP_001391372.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum F str. Langeland] gi|152935053|gb|ABS40551.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum F str. Langeland] gi|295319401|gb|ADF99778.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum F str. 230613] Length = 326 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEIYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYKLEEGIKQTIEWYKNNQTWW 324 >gi|116671225|ref|YP_832158.1| dTDP-glucose 4,6-dehydratase [Arthrobacter sp. FB24] gi|116611334|gb|ABK04058.1| dTDP-glucose 4,6-dehydratase [Arthrobacter sp. FB24] Length = 332 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 211/337 (62%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +L+VTGGAGFIGS Y++ + V V+DKLTYAGNL SL + + F F+Q DIC Sbjct: 2 QKLLVTGGAGFIGSNFVHYVLENTDDHVTVLDKLTYAGNLESLSGLPEER-FRFVQGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + D +V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 61 DAALVDTLVAD--ADVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF ISTDEVYG L D F+E+ PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 --KHNKRFHHISTDEVYGDLELDDPERFTEETPYNPSSPYSSTKAGSDLLVRAWVRSFGL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++ DH A+ ++ Sbjct: 169 QATISNCSNNYGPYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAII 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+IGE Y IG + E+ N D+V E+ P +Y H + DRPGHD RYAID Sbjct: 229 AKGKIGETYLIGADGEKNNKDVV-ELILKHMGQSPDAYDH------VVDRPGHDLRYAID 281 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 S+K+++E+GW P+ N ++G+ T+ WY +N WWRP Sbjct: 282 STKLRNELGWEPKFSNFDAGIEDTIAWYRENENWWRP 318 >gi|119962227|ref|YP_947907.1| dTDP-glucose 4,6-dehydratase [Arthrobacter aurescens TC1] gi|119949086|gb|ABM07997.1| dTDP-glucose 4,6-dehydratase [Arthrobacter aurescens TC1] Length = 334 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 209/337 (62%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIG Y++ ++ V V+DKLTYAGN+ SL + S F+F + DIC Sbjct: 4 QRILVTGGAGFIGCNFVHYIMEHTRLHVTVLDKLTYAGNIESLSGLPSSR-FAFFEGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + S DA+V+FAAESH D S+ F+ TN++GTF L+E R Sbjct: 63 DAAMVDSLTSSV--DAVVHFAAESHNDNSLAEPRPFLDTNLLGTFTLIESAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF ISTDEVYG L D F+E+ Y P+SPYSATKA SD LV AW ++G+ Sbjct: 113 --RHDIRFHHISTDEVYGDLALDDPHRFTEESVYRPTSPYSATKAGSDMLVRAWVRSFGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++VEDH A+ +L Sbjct: 171 RATISNCSNNYGPYQHVEKFIPRQITNILDGDRPRLYGKGRNVRDWIHVEDHSSAVLAIL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++GR+GE Y IG + ER N ++V E+ L +Y + DRPGHD RYAID Sbjct: 231 ERGRVGETYLIGADGERSNREVV-EMLLALAGQPRDAYD------LVTDRPGHDLRYAID 283 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 SSK++ E+GW P+ + ++GL TV WY DN WWRP Sbjct: 284 SSKLRRELGWAPRYSDFDAGLADTVQWYRDNEHWWRP 320 >gi|260911724|ref|ZP_05918300.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 472 str. F0295] gi|260634149|gb|EEX52263.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 472 str. F0295] Length = 382 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 173/386 (44%), Positives = 232/386 (60%), Gaps = 40/386 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDL----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+ I+V+V+D LTYAGNL ++K F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLEKKYKHEDIKVIVLDLLTYAGNLGTIKNDIDDKRCVFVRGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +R+ + + D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 65 RNRDLVNGLFADNDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARKAW-VTG 123 Query: 120 QDK------KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +DK K R+ Q+STDEVYGSL D G F E P P SPYSA+KAS+D V+A+ Sbjct: 124 KDKTGYPTWKTGKRYHQVSTDEVYGSLGDTGYFMETTPLCPHSPYSASKASADMFVMAYH 183 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G+NVRDWLYVEDH +A Sbjct: 184 DTYRMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGKGENVRDWLYVEDHCKA 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLLD-----------------ALI 271 + LV+++GR+GE YN+GG+NE KNIDIV I L+D I Sbjct: 244 IDLVVREGRVGEVYNVGGHNEMKNIDIVKLVIKTIRQLMDNDKSLRRVLKKQDLDTNGEI 303 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + + +LI ++ DR GHD+RY ID +KIK+E+GW+P+ G+ KT+ W L N W Sbjct: 304 RTDWINEDLITYVADRLGHDQRYGIDPTKIKNELGWYPETMFADGIVKTIEWNLANQEWI 363 Query: 332 RPLYKELKPDNDYSKWKNLNEMSCNR 357 + DY K+ EM NR Sbjct: 364 AEV-----TSGDYQKY--YEEMYGNR 382 >gi|296242301|ref|YP_003649788.1| dTDP-glucose 4,6-dehydratase [Thermosphaera aggregans DSM 11486] gi|296094885|gb|ADG90836.1| dTDP-glucose 4,6-dehydratase [Thermosphaera aggregans DSM 11486] Length = 335 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 166/352 (47%), Positives = 214/352 (60%), Gaps = 20/352 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+ V GGAGFIGS RYLV N +QVLV DKLTYAG L +L + ++ F++ DI Sbjct: 1 MRIAVLGGAGFIGSNFVRYLVSNHEDVQVLVYDKLTYAGRLENLHGLLENKRLKFIRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C+ E + AL+EFQ DAIVNFAAE+HVDRSI F+ TNI G F +LE +R Sbjct: 61 CNEELLEHALREFQADAIVNFAAETHVDRSINNPAPFLQTNIYGVFTILEVSR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + D R L +STDEVYG L +G E P NPSSPYSA+KAS D L+ ++G TYG+ Sbjct: 114 --RLDVNRLLHMSTDEVYGDLYGVEGEADEKWPLNPSSPYSASKASGDLLIKSYGRTYGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +L+ SNNYGPY PEKLIP I R++ G +YGDG VRDWLYVED RALY +L Sbjct: 172 KYILARPSNNYGPYQHPEKLIPRTIIRLLHGKPATIYGDGSQVRDWLYVEDTARALYTIL 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G E YNI + +IV+ + + I +++ RPG DRRYA+ Sbjct: 232 TRGGYQEVYNICASESATVREIVYRV------VESMGRDPARDIVYVKGRPGEDRRYAMK 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKN 349 +KI +GW P + GL KT+ WY N WWWRPL E+ +D + W++ Sbjct: 286 CNKILG-LGWKPLVKLGEGLAKTIEWYTRNEWWWRPLVDEVYVLSD-TPWRH 335 >gi|258593514|emb|CBE69853.1| dTDP-D-glucose 4,6-dehydratase [NC10 bacterium 'Dutch sediment'] Length = 340 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 160/334 (47%), Positives = 217/334 (64%), Gaps = 19/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS R+L+ + V+ +DKLTYAGNL +L ++ + F++ I Sbjct: 1 MRILVTGGAGFIGSNFIRHLLATESACHVVNLDKLTYAGNLENLTDVEHDPRYRFVKGSI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + LKE DA++NFAAESHVDRSI A F TN++GT ++L+ R Sbjct: 61 CDALLVDELLKE-GFDALINFAAESHVDRSIQDARAFTETNVLGTQVMLDACR------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R +Q+STDEVYGSL G F+E+ P + +SPY+A+KA+ D L LA+ TYG+P Sbjct: 113 --RHRVPRMMQVSTDEVYGSLGAFGRFTEESPLHSNSPYAASKAAGDLLALAYCRTYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ SNNYGP+ FPEK+IPL IT + G + LYGDG ++RDWL+V DH AL L+L Sbjct: 171 VIITRSSNNYGPHQFPEKVIPLFITNALVGEPLPLYGDGLHIRDWLHVRDHCEALALILN 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G GE YNIGG ER NID+ F+L L LI ++DR GHDRRYA+D+ Sbjct: 231 NGVSGEIYNIGGRCERANIDVAR---FILRTLGKPD----TLIAHVKDRLGHDRRYALDA 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SK++ +GW P+ E+GL +TV WY D+ WWR Sbjct: 284 SKLEQALGWSPRIAFEAGLEETVRWYEDHATWWR 317 >gi|168185161|ref|ZP_02619825.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum Bf] gi|237795492|ref|YP_002863044.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum Ba4 str. 657] gi|182671788|gb|EDT83749.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum Bf] gi|229261183|gb|ACQ52216.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum Ba4 str. 657] gi|322806320|emb|CBZ03888.1| dtdp-glucose 4,6-dehydratase [Clostridium botulinum H04402 065] Length = 326 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYKLEEGIKETIEWYKNNQTWW 324 >gi|268680404|ref|YP_003304835.1| dTDP-glucose 4,6-dehydratase [Sulfurospirillum deleyianum DSM 6946] gi|268618435|gb|ACZ12800.1| dTDP-glucose 4,6-dehydratase [Sulfurospirillum deleyianum DSM 6946] Length = 346 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 154/329 (46%), Positives = 215/329 (65%), Gaps = 8/329 (2%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 TG AGFIGS Y + LV +D LTYAGNL +LKE Q+ + F++ DIC+RE Sbjct: 12 TGTAGFIGSNFVPYFLEKYPEYNLVNLDLLTYAGNLENLKECEQNPRYKFIKGDICNREL 71 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + E+ +++FAAESHVD SI F+ TN+ GT+ L++ + +W K+ Sbjct: 72 VEFIFNEYDIRGVIHFAAESHVDNSIKNPGVFVQTNVNGTYTLVDVAKNYWMEKPFTYKE 131 Query: 125 QF---RFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG+L LF+E PY P+SPYSA+KASSD ++ A+ TYG+ Sbjct: 132 AYQNCRFHHISTDEVYGTLTLDPNDLFTETTPYMPNSPYSASKASSDMIIRAYYETYGLN 191 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNNYGP EKLIP I ++G+ + +YGDG+N+RDWLYV DH + + +V Sbjct: 192 TVITNCSNNYGPKQHDEKLIPTIIRNALKGNPIPIYGDGKNIRDWLYVLDHCKGIDIVYH 251 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAID 297 G+ G+ YNIGG NER N+ IV I +LD +PKS +S+ LI F+EDR GHDRRYAID Sbjct: 252 TGKTGDTYNIGGRNERTNLQIVDRICTILDQQVPKSNFSYKSLITFVEDRAGHDRRYAID 311 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++K+K+E+ W E ++G+ KT+ WYL+ Sbjct: 312 ATKLKNELEWKANETFDTGIVKTIEWYLN 340 >gi|261367242|ref|ZP_05980125.1| dTDP-glucose 4,6-dehydratase [Subdoligranulum variabile DSM 15176] gi|282570843|gb|EFB76378.1| dTDP-glucose 4,6-dehydratase [Subdoligranulum variabile DSM 15176] Length = 354 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/330 (46%), Positives = 215/330 (65%), Gaps = 3/330 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIGS Y+++ + I+++ +DKLTYAGNL +L++I F+Q DICD+ Sbjct: 5 LVTGCAGFIGSNFVHYMLDKYEDIRLINLDKLTYAGNLENLQDIEDDARHIFVQGDICDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLSQD 121 + + ++ PD ++NFAAESHVDRSI + F+ +N++GT LL+ + W+ ++ Sbjct: 65 ALVTDLIAKYDPDYVINFAAESHVDRSIKNPEIFVESNVLGTVNLLQCCKDAWYDAEAKT 124 Query: 122 KKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K ++LQ+STDEVYG+L +G F E P P SPYSA+KAS+D V A+ TYG+P+ Sbjct: 125 WKAGKKYLQVSTDEVYGALGAEGYFMETTPLCPHSPYSASKASADMFVKAFHDTYGMPMN 184 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIPL I + + +YGDG +RDWLYV DH +A+ +V G Sbjct: 185 ITRCSNNYGPYQFPEKLIPLLINNAKQHKKLPVYGDGMQIRDWLYVMDHCKAIDMVANGG 244 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YN+GG+NER NI IV + L + ELI + DR GHDRRY ID +K Sbjct: 245 KDGEVYNVGGHNERPNIFIVKTVIAQLHDRLKDEGISEELITHVADRLGHDRRYGIDPTK 304 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IK ++GW+P+ E G+ T+ WYL + W Sbjct: 305 IKEDLGWYPETPFEKGIVLTIDWYLAHPEW 334 >gi|303244871|ref|ZP_07331198.1| dTDP-glucose 4,6-dehydratase [Methanothermococcus okinawensis IH1] gi|302484748|gb|EFL47685.1| dTDP-glucose 4,6-dehydratase [Methanothermococcus okinawensis IH1] Length = 334 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 156/340 (45%), Positives = 219/340 (64%), Gaps = 21/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQV 57 M+++VTGGAGFIGS RY+++ K ++++ +DKL Y NL +LK+I+ ++ +SF++ Sbjct: 1 MKMLVTGGAGFIGSNFIRYMLDKYKDLEIINLDKLGYGSNLENLKDITNKYNSRYSFVKG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E + +KE DA+VN AAE+HVDRSI F+ +NI+G + +LE + + Sbjct: 61 DINDFELVSKLIKEV--DAVVNMAAETHVDRSISNPYSFLESNIMGVYTILEAVKKY--- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +STDEVYG +++G F+E+ PSSPYSA KA D LVL + TY + Sbjct: 116 -----NPDVNLVHVSTDEVYGDIEEGSFTENDRLMPSSPYSAGKAGGDMLVLGYARTYNL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ C+NNYGPY FPEKLIP I R + + +YG G N+RDWLYV DH + VL Sbjct: 171 NAKITRCTNNYGPYQFPEKLIPKTIIRASKDLKIPIYGKGDNIRDWLYVLDHCSGIETVL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG E YNI NNE+ NIDI I LL+ + +LI F+EDRPGHD RY++D Sbjct: 231 EKGEKREVYNISSNNEKMNIDIAKMILELLNKPL-------DLIEFVEDRPGHDVRYSLD 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 SSK+K E+GW P+ + + GL +TV WY+DN WWW+PL E Sbjct: 284 SSKLK-ELGWKPKYDFKEGLKETVNWYMDNEWWWKPLINE 322 >gi|308234497|ref|ZP_07665234.1| dTDP-glucose 4,6-dehydratase [Atopobium vaginae DSM 15829] gi|328944090|ref|ZP_08241555.1| dTDP-glucose 4,6-dehydratase [Atopobium vaginae DSM 15829] gi|327492059|gb|EGF23833.1| dTDP-glucose 4,6-dehydratase [Atopobium vaginae DSM 15829] Length = 367 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 160/347 (46%), Positives = 216/347 (62%), Gaps = 24/347 (6%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y++ N I+++ +D LTYAGNL +L+ I + +SF +VDI + Sbjct: 5 LVTGGAGFIGSNFILYMLRNYTDIRIVNMDCLTYAGNLENLRSIEDDSRYSFERVDIRNA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+ ++P+ +VNFAAESHVDRSI F+ TN++G LL + W D Sbjct: 65 DEVSRVLRTYKPNYVVNFAAESHVDRSIETPQIFVETNVLGCVTLLNCCKKLW----LDD 120 Query: 123 KDQF---RFLQISTDEVYGSL----------------DKGLFSEDMPYNPSSPYSATKAS 163 K F RFLQ+STDEVYG+L F ED P SPYSA+KAS Sbjct: 121 KGSFGDHRFLQVSTDEVYGALAIPDQVNPNGSPKDPAHTTYFHEDTPLCGHSPYSASKAS 180 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 +D L A+ TY P L++ CSNNYGPY FPEKLIPL I + + +YGDG NVRDW Sbjct: 181 ADMLTRAYWDTYKFPALVTRCSNNYGPYQFPEKLIPLMIHNALHHKELPVYGDGLNVRDW 240 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 LYV+DH +A+ +VL++GR+G YN+GG+NER NI IV I + + +LIR+ Sbjct: 241 LYVDDHCKAIDMVLQRGRLGNAYNVGGHNERSNIYIVKTIVEHVRNVTGDRAITEDLIRY 300 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + DR GHDRRY I+ +KIK E+GW+P+ E G+ KT+ WYL + W Sbjct: 301 VGDRKGHDRRYGIEPTKIKDELGWYPETTYEDGIIKTIDWYLSHQAW 347 >gi|134046341|ref|YP_001097826.1| dTDP-glucose 4,6-dehydratase [Methanococcus maripaludis C5] gi|132663966|gb|ABO35612.1| dTDP-glucose 4,6-dehydratase [Methanococcus maripaludis C5] Length = 307 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 160/326 (49%), Positives = 214/326 (65%), Gaps = 23/326 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIG RY+V + +++V+DKLTYAGNL +L +IS F+Q DIC Sbjct: 1 MKILVTGGAGFIGCNFVRYMVQNYDYEIMVLDKLTYAGNLENLSDISGK--IEFIQGDIC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + A+K+ D+I++FAAESHVD SI + F+ TNI GT+ LLE R + Sbjct: 59 SEEDVSKAMKDV--DSIIHFAAESHVDNSIKNPENFVKTNIFGTYTLLEYARKF----GI 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 DK FL +STDEVYGS + G F E+ +PSSPYSATKA SD LV A+ TYG+ Sbjct: 113 DK-----FLHVSTDEVYGSTENGFFKEEDRLDPSSPYSATKAGSDLLVNAYHKTYGLNTF 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++C NN+GPY +PEKLIP+ I + I + +YGDG NVRDW+YVEDH + V KG Sbjct: 168 ITHCGNNFGPYQYPEKLIPVLIKKAIRNEKLPIYGDGLNVRDWIYVEDHCTGIDTVFNKG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNIG E+ N++IV F+L+ L P+S LI F+ DRPGHDRRYA+DS+ Sbjct: 228 NYGEVYNIGSGYEKTNLEIV---KFILNELDKPES-----LIEFVTDRPGHDRRYALDST 279 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 K++ ++GW P+ E L T+ WYL Sbjct: 280 KMR-DLGWTPKWGFEKALKFTINWYL 304 >gi|269127012|ref|YP_003300382.1| dTDP-glucose 4,6-dehydratase [Thermomonospora curvata DSM 43183] gi|268311970|gb|ACY98344.1| dTDP-glucose 4,6-dehydratase [Thermomonospora curvata DSM 43183] Length = 336 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 155/339 (45%), Positives = 218/339 (64%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTG AGFIGS R +++ ++ V+DKLTYAGN +L + F+ Sbjct: 1 MRILVTGAAGFIGSYYVRAMLDGEYPGFTDAKITVVDKLTYAGNRANLP--ASHPRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DIC + + + DA+V+FAAESHVDRS++ A +F++TN++GT L+ Sbjct: 59 QADICQQSLLLELVDGH--DAVVHFAAESHVDRSLVNAGDFVSTNVLGTQNLMH------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL+ R + +STDEVYGS+++G ++E+ P +P+SPY+A+KA+SD + L++ T+ Sbjct: 111 ACLATGVA---RVVHVSTDEVYGSIEQGAWTEEWPLSPNSPYAASKAASDLIALSYARTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY EKLIPL +T ++ G LYGDG +VR+WL+V DH RA+ L Sbjct: 168 GLDVSVTRCSNNYGPYQHVEKLIPLFVTNLLSGEPAPLYGDGSHVREWLHVSDHCRAVQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE YNIGG ER N I E+ L A E+IR + DR GHDRRYA Sbjct: 228 VLTSGRAGEVYNIGGGTERTNRQIAEELVRLCGA-------GPEMIRRVPDRKGHDRRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI++E+G+ PQ E GL TV WY D+ WW+PL Sbjct: 281 LDDSKIRAELGYAPQVPFEEGLAATVAWYRDHPDWWKPL 319 >gi|256397293|ref|YP_003118857.1| dTDP-glucose 4,6-dehydratase [Catenulispora acidiphila DSM 44928] gi|256363519|gb|ACU77016.1| dTDP-glucose 4,6-dehydratase [Catenulispora acidiphila DSM 44928] Length = 338 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 221/336 (65%), Gaps = 20/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 MR++VTGGAGFIGS R L++ V V+D LTY+G +L+ + + F+F + D Sbjct: 1 MRILVTGGAGFIGSEYVRQLLSRPGAPDSVTVLDALTYSGVEANLEPVRDNPGFAFRRGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D E + + + DA+V+FAAESHVDRSILGA F+TTN++GT +LL+ R Sbjct: 61 IRDAEVVDAVMPGH--DAVVHFAAESHVDRSILGAGPFVTTNVVGTQVLLDAAR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYGS+D+G ++E+ P P+S YSA+KA SD LVL++ T+ + Sbjct: 113 ---KHGVGRFVHVSTDEVYGSIDEGSWTEEWPLAPNSAYSASKAGSDLLVLSYHRTHKMD 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYG Y FPEK+IP ++T +I+G V LYGDG N+RDWL+V DH R + L L+ Sbjct: 170 VVVTRCSNNYGYYQFPEKMIPRSVTNLIDGGMVDLYGDGANIRDWLHVSDHCRGIDLALR 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR GE YNIGG E N ++V +LD K +S +R +EDR GHDRRY++ Sbjct: 230 QGRAGEVYNIGGGTELTNKELVQ---LMLDG-TGKDWSS---VRTVEDRKGHDRRYSLSI 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+ E+G+ P+ E G+ +T+ WY +N WW PL Sbjct: 283 DKIQRELGYEPRVRFEDGMGQTIDWYKNNRSWWEPL 318 >gi|148380013|ref|YP_001254554.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|153932217|ref|YP_001384311.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 19397] gi|153935869|ref|YP_001387848.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. Hall] gi|148289497|emb|CAL83595.1| putative dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|152928261|gb|ABS33761.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 19397] gi|152931783|gb|ABS37282.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. Hall] Length = 326 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSINGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYKLEEGIKETIEWYKNNQTWW 324 >gi|167755095|ref|ZP_02427222.1| hypothetical protein CLORAM_00599 [Clostridium ramosum DSM 1402] gi|237733478|ref|ZP_04563959.1| dTDP-glucose 4,6-dehydratase [Mollicutes bacterium D7] gi|167705145|gb|EDS19724.1| hypothetical protein CLORAM_00599 [Clostridium ramosum DSM 1402] gi|229383513|gb|EEO33604.1| dTDP-glucose 4,6-dehydratase [Coprobacillus sp. D7] Length = 341 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/337 (48%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y+V ++V +D LTYAGNL + K + + F++ DI Sbjct: 1 MKILVTGGAGFIGGNFVHYMVETYPEDMIVNLDLLTYAGNLETCKPVEGKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I +E + D +VNFAAESHVDRSI + F+ TN++GT LL+ + + Sbjct: 61 ADREFIFKLFEEEKFDVVVNFAAESHVDRSITDPEIFVKTNVMGTTTLLDAAKEFGVK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E P + SSPYS++KAS+D VLA+ T+ Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSSSKASADLFVLAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEELPVYGKGDNVRDWLHVYDHCVAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KGR+GE YN+GG+NER N+++V I L+ P+S LI+++EDR GHDRRYA Sbjct: 232 IIRKGRVGEVYNVGGHNERTNLEVVQTILKALNK--PES-----LIKYVEDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKLETELGWKPKYNFDTGIQQTIQWYLDNKEWWQ 321 >gi|254172830|ref|ZP_04879504.1| dTDP-glucose 4,6-dehydratase [Thermococcus sp. AM4] gi|214032986|gb|EEB73814.1| dTDP-glucose 4,6-dehydratase [Thermococcus sp. AM4] Length = 333 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 210/338 (62%), Gaps = 18/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGG GFIGS RY++ +V+ +DKL Y N +LK+I + ++F++ DI Sbjct: 1 MKLLVTGGMGFIGSNFIRYVLEKHPDWEVINLDKLGYGSNPANLKDIEEDPRYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E ++ +K Q DA+VNFAAESHVDRSI D F+ +N+IG + +LE R Sbjct: 61 SDFELMKELVK--QVDAVVNFAAESHVDRSISSPDHFLKSNVIGVYTILEAIR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R + ISTDEVYG + KG F E+ PSSPYSATKA++D VL W TY + Sbjct: 112 -KESPEVRLVHISTDEVYGDILKGSFREEDALMPSSPYSATKAAADSFVLGWARTYKLNA 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NNYGPY FPEKLIP I R V +YG GQNVRDW+YVEDHVRA+ VL + Sbjct: 171 SITRCTNNYGPYQFPEKLIPKTIIRASMELKVPIYGTGQNVRDWIYVEDHVRAVERVLLE 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G E YN+ E+ N+++V I LL LI F+EDRPGHD RY++DS Sbjct: 231 GEPREVYNVSAGEEKTNLEVVKTILKLLG-------KDESLIEFVEDRPGHDLRYSLDSW 283 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KI ++ W P+ + E G+ TV WYL N WWRPL E Sbjct: 284 KITRDLKWRPRYSFEEGIKLTVEWYLKNEDWWRPLVNE 321 >gi|118587025|ref|ZP_01544456.1| dTDP glucose 4, 6-dehydratase [Oenococcus oeni ATCC BAA-1163] gi|118432546|gb|EAV39281.1| dTDP glucose 4, 6-dehydratase [Oenococcus oeni ATCC BAA-1163] Length = 329 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ L+ +D LTYAGNL++ +I + F+ DI Sbjct: 3 MNILVTGGAGFIGSNFVHYMLKAHPDYNLIDLDLLTYAGNLHNFDDIKNESHHIFIHGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + K + DA+VNFAAESHVDRSIL + F+ TN+ GT LL+ R Sbjct: 63 RNAQLVDYLFKTYDFDAVVNFAAESHVDRSILHPEIFVQTNVEGTVNLLQTAR------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K ++LQ+STDEVYGSL K G F+E+ P P+SPYSA+KA++D A+ TYG+ Sbjct: 116 --KYGIKKYLQVSTDEVYGSLGKEGYFNEESPLAPNSPYSASKAAADLETRAFYETYGLN 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ SNNYGPY FPEKLIPL +T + G ++ +YGDG+N+RDWLYVEDH RA+ LVL Sbjct: 174 INITRTSNNYGPYQFPEKLIPLMVTNGMTGGNLPIYGDGENIRDWLYVEDHGRAIDLVLH 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YN+GG+NE+ N IV D ++ + I++++DR GHDRRYAID Sbjct: 234 QGKSGEIYNVGGHNEKTNNQIV-------DLIVENLGLSKDRIKYVKDRLGHDRRYAIDP 286 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKIK E+GW P + G+ KT+ WY ++ WW+PL Sbjct: 287 SKIKRELGWEPTIMFDKGIIKTIDWYKEHEDWWKPL 322 >gi|30794996|ref|NP_851446.1| putative NDP-hexose 4,6-dehydratase [Streptomyces rochei] gi|30698369|dbj|BAC76482.1| putative NDP-hexose 4,6-dehydratase [Streptomyces rochei] Length = 328 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 160/343 (46%), Positives = 215/343 (62%), Gaps = 28/343 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTG AGFIGS R ++ ++++ +DKLTYAGN +L E+ +F+ Sbjct: 1 MRLLVTGAAGFIGSTYVRNVLAGAYGEAGEVRITALDKLTYAGNPANLAEVRGHPDLTFV 60 Query: 56 QVDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 Q DICD E L + P DA+VNFAAESHVDRSI GAD+F+ TN++GT Sbjct: 61 QGDICDTEL----LADLVPGHDAVVNFAAESHVDRSIAGADDFVRTNVLGT--------- 107 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + RF+ ISTDEVYGS++ G ++ED +SPY+A+KA +D L A+ Sbjct: 108 QALLSAARAARVPRFVHISTDEVYGSIESGSWTEDCALLANSPYAASKAGADILARAYAR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TYG+ V ++ CSNNYGP +PEKLIPL +T ++EG V LYGDG NVRDWL+V+DH R + Sbjct: 168 TYGMDVSVTRCSNNYGPRQYPEKLIPLFVTNLLEGERVPLYGDGLNVRDWLHVDDHCRGV 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LVL+KGR G+ YNIGG E N++ L L+ + + E I + DRPGHDRR Sbjct: 228 QLVLEKGRAGQAYNIGGGEELTNLE-------LTRLLLAECGADPERIVHVPDRPGHDRR 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 Y +D S+I+ E+G+ P+ GL TV WY DN WW+PL + Sbjct: 281 YCVDDSRIR-ELGYAPRVPFRDGLAHTVEWYRDNPQWWKPLRR 322 >gi|91774153|ref|YP_566845.1| dTDP-glucose 4,6-dehydratase [Methanococcoides burtonii DSM 6242] gi|91713168|gb|ABE53095.1| dTDP-glucose 4,6-dehydratase [Methanococcoides burtonii DSM 6242] Length = 318 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 218/335 (65%), Gaps = 20/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGG GFIGS R ++ + +DKLTYAGN +LK+I + +SF++ DI Sbjct: 1 MKLLVTGGCGFIGSNFVRMMLQRYPDCDITNLDKLTYAGNPENLKDIRDNPNYSFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + A++ D +++FAAESHVDRSI D F+ TN++GT LL L Sbjct: 61 CDPHVVEKAMENV--DIVIHFAAESHVDRSIEDGDVFVRTNVLGTNTLLN------CALR 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D K +F+ +STDEVYGS + G F E+ PSSPYS++KA SD L +++ TYG+PV Sbjct: 113 SDIK---KFIHVSTDEVYGSTETGSFKEEDNLEPSSPYSSSKAGSDLLAMSYHTTYGLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NN+GPY +PEKLIPL IT ++E V +YG G N+RDW++V+DH + VL+ Sbjct: 170 SITRCTNNFGPYQYPEKLIPLFITNLMESEKVPVYGTGLNIRDWIHVDDHCSGIDFVLQN 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG NE N+DI + L D +S +IR++EDR GHD RY++D + Sbjct: 230 GNSGEVYNIGGGNELTNLDITHRV--LKDLGKDES-----MIRYVEDRKGHDFRYSLDCT 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K ++GW P+ + ES L+ TV WY++N WWW PL Sbjct: 283 KLK-KMGWKPEYDFESALSSTVKWYVENRWWWEPL 316 >gi|116491429|ref|YP_810973.1| dTDP-glucose 4,6-dehydratase [Oenococcus oeni PSU-1] gi|290891009|ref|ZP_06554073.1| hypothetical protein AWRIB429_1463 [Oenococcus oeni AWRIB429] gi|116092154|gb|ABJ57308.1| dTDP-glucose 4,6-dehydratase [Oenococcus oeni PSU-1] gi|290479408|gb|EFD88068.1| hypothetical protein AWRIB429_1463 [Oenococcus oeni AWRIB429] Length = 329 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 219/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ L+ +D LTYAGNL++ +I + F+ DI Sbjct: 3 MNILVTGGAGFIGSNFVHYMLKAHPDYNLIDLDLLTYAGNLHNFDDIKNESHHIFIHGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + K + DA+VNFAAESHVDRSIL + F+ TN+ GT LL+ R Sbjct: 63 RNAQLVDYLFKTYDFDAVVNFAAESHVDRSILHPEIFVQTNVEGTVNLLQTAR------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K ++LQ+STDEVYGSL K G F+E+ P P+SPYSA+KA++D A+ TYG+ Sbjct: 116 --KYGIKKYLQVSTDEVYGSLGKEGYFNEESPLAPNSPYSASKAAADLETRAFYETYGLN 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ SNNYGPY FPEKLIPL +T + G ++ +YGDG+N+RDWLYVEDH RA+ LVL Sbjct: 174 INITRTSNNYGPYQFPEKLIPLMVTNGMTGGNLPIYGDGENIRDWLYVEDHGRAIDLVLH 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YN+GG+NE+ N IV D ++ + I++++DR GHDRRYAID Sbjct: 234 QGKPGEIYNVGGHNEKTNNQIV-------DLIVENLGLSKDRIKYVKDRLGHDRRYAIDP 286 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SKIK E+GW P + G+ KT+ WY ++ WW+PL Sbjct: 287 SKIKRELGWEPTIMFDKGIIKTIDWYKEHEDWWKPL 322 >gi|157384629|gb|ABV49607.1| NDP-hexose 4,6-dehydratase [Streptomyces eurythermus] Length = 332 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/344 (45%), Positives = 213/344 (61%), Gaps = 23/344 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN----DLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ DL + +V+DKLTYAGNL +L ++ F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDLAGARTVVVDKLTYAGNLANLDPVADHPSLEFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D E + ++ D +V+FAAESHVDRSI A F+ TN+ GT +LL+ Sbjct: 61 HADIRDAEVMSRVVR--GADVVVHFAAESHVDRSIADASAFVETNVRGTQVLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+ +G + E+ P P+SPY+A+KA+SD L LA+ TY Sbjct: 113 ---AAVEAGAGRFVHVSTDEVYGSIAEGSWREEQPLAPNSPYAASKAASDLLALAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+++ CSNNYGPY PEK++PL T +++G V LY DG N RDWL+V+DH R + L Sbjct: 170 GLPVVVTRCSNNYGPYQHPEKVVPLFATNLLDGLTVPLYSDGGNSRDWLHVDDHCRGISL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +GR GE Y+IGG E N ++ + L A +R + DRPGHD RYA Sbjct: 230 VATRGRPGEVYHIGGGTELTNRELTKRLLGLCGA-------DASSVRHVADRPGHDLRYA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +D KI E+G+ P+ + +GL TV WY +N WW PL K + Sbjct: 283 LDIGKITGELGYAPRTDFTTGLADTVRWYAENRAWWEPLKKAAQ 326 >gi|297718753|gb|ADI50277.1| dTDP-glucose dehydratase [Streptomyces sp. MK730-62F2] Length = 326 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 157/341 (46%), Positives = 221/341 (64%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M L+VTG AGFIGS R L+ +V V+DKLTYAG L++L E++ L F+Q Sbjct: 1 MNLLVTGAAGFIGSRYVRALLASDAPDAPRVTVLDKLTYAGTLDNL-ELTHPRL-EFVQG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + + D +V+FAAESHVDRSI GA +F+ TN++GT LL+ Sbjct: 59 DICDAELVDKLMAD--ADQVVHFAAESHVDRSISGAADFVRTNVLGTQTLLDAAL----- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F+ +STDEVYGS++ G + ED P P+SPYSA+KASSD L LA+ T+G+ Sbjct: 112 ----RHGTGPFVHVSTDEVYGSIETGSWPEDHPLQPNSPYSASKASSDLLALAYHRTHGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP+ FPEK++PL +T +++G V LYG+G+N+RDWL+V+DH + + L Sbjct: 168 DVRVTRCSNNYGPHQFPEKVVPLFVTNLLDGHKVPLYGEGRNIRDWLHVDDHCQGVDLAR 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LLDA + + + ++EDR GHD RY++D Sbjct: 228 TKGRPGEVYNIGGGTELTNKELT---GLLLDA----CGADWDRVEYVEDRKGHDLRYSVD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 SK + E+G+ P+ + +GL +TV WY DN WW PL + + Sbjct: 281 CSKARDELGYRPRHDFTTGLAETVAWYRDNRAWWEPLKQRV 321 >gi|149372623|ref|ZP_01891735.1| dTDP-glucose 4,6-dehydratase [unidentified eubacterium SCB49] gi|149354666|gb|EDM43230.1| dTDP-glucose 4,6-dehydratase [unidentified eubacterium SCB49] Length = 359 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 220/334 (65%), Gaps = 7/334 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R V ++ +D LTYAGNL +L++I + ++F++ DI Sbjct: 13 KILITGGAGFIGSHVVRKFVTTYPAYKIYNLDALTYAGNLENLRDIENQDNYTFIKGDIT 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + + + +++ AAESHVDRSI F TNI+GT +LL+ + W Q Sbjct: 73 DDTFIMNLFETEKFTDVIHLAAESHVDRSIADPLAFAKTNILGTMVLLQAFKKLW----Q 128 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D RF +STDEVYG+L + GLF+E Y+P+SPY+A+KASSD+ V A+G TYG+P Sbjct: 129 DDWKNKRFYHVSTDEVYGTLGESGLFTETTAYDPNSPYAASKASSDHFVRAYGETYGLPY 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP FPEKLIPL I +IE + +YGDG RDWLYV DH A+ V Sbjct: 189 VISNCSNNYGPNQFPEKLIPLFINNIIEKKPLPVYGDGNYTRDWLYVLDHAIAIDKVFHT 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G E YNIGG NE KNID+V + +D + ++ ++ LI +++DRPGHD RYAID+ Sbjct: 249 GVNTETYNIGGFNEWKNIDLVKVLCDQMDEKLSRTKGESQKLITYVKDRPGHDLRYAIDA 308 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KIK+++ W P E GL++T+ WYL+N+ W + Sbjct: 309 NKIKNKLSWEPSVTFEEGLSQTIDWYLNNSIWLK 342 >gi|254385129|ref|ZP_05000462.1| dTDP-glucose-4,6-dehydratase [Streptomyces sp. Mg1] gi|194344007|gb|EDX24973.1| dTDP-glucose-4,6-dehydratase [Streptomyces sp. Mg1] Length = 323 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/345 (45%), Positives = 215/345 (62%), Gaps = 27/345 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTG AGFIGS R L++ VL +DKLTYAGN +L E++ +FL Sbjct: 1 MRVLVTGAAGFIGSHFVRQLLSGSYPELADAHVLSLDKLTYAGNTENLAEVAGHPRHTFL 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICDR + AL+ D +V+FAAESHVDRSI + FITTN++GT LL Sbjct: 61 HGDICDRPTVTQALRGI--DLVVHFAAESHVDRSITDSAAFITTNVLGTHTLLR------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S + RF+ +STDEVYGS+ +G +E P +P+SPY+A+KASSD L LA+ T+ Sbjct: 113 ---SALEAGVSRFVHVSTDEVYGSIPEGSSAETDPLDPNSPYAASKASSDLLALAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEK++PL +T ++EG + LYGDG + RDWL+V+DH R + + Sbjct: 170 GLDVRVTRCSNNYGPHQHPEKVVPLFVTHLLEGLRLPLYGDGLHRRDWLHVDDHCRGIAM 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +GR GE YNIGG E N+D+ + + A +S ++ + DR HDRRY Sbjct: 230 VAGRGRAGEVYNIGGGTELSNVDLTRRLLGVFGA----DWS---VVDRVPDRAAHDRRYC 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +D+ KI E+GW P+ E GL +TV WY DN WW K LKP Sbjct: 283 VDTRKITEELGWAPRVAFERGLAETVDWYRDNGTWW----KALKP 323 >gi|315937043|gb|ADU56052.1| hypothetical protein CA37-29 [uncultured organism CA37] Length = 326 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 163/345 (47%), Positives = 217/345 (62%), Gaps = 25/345 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR+ VTGGAGFIGSA R L+ D V V+D L+Y+GN +L S S L F+ Sbjct: 1 MRIFVTGGAGFIGSAYVRTLLKDGYAGAAGASVTVLDLLSYSGNRANLPP-SDSRL-RFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q I D + L DA+V+FAAESHVDRSI GA F++TN +GT +LL+ R Sbjct: 59 QGSILDSALLSRLLPGH--DAVVHFAAESHVDRSIAGAVPFVSTNALGTQVLLDAAR--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RFL +STDEVYGS+++G ++E P P+SPY+A+KASSD L LA T+ Sbjct: 114 ------AAGVGRFLHVSTDEVYGSIEQGSWTETRPLAPNSPYAASKASSDLLALAAHRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYGPY FPEK+IPL +T +++G V LYGDG N RDWL+V DH ++L Sbjct: 168 GMDVVVTRCSNNYGPYQFPEKIIPLFVTNLLDGRPVPLYGDGGNTRDWLHVADHCCGIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ G GE YNIGG E N ++ G LLDA + +++R + DRPGHDRRY+ Sbjct: 228 ALEHGVAGEVYNIGGGTELTNRELT---GRLLDAC----GAGWDMVRPVADRPGHDRRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +D +KI+ E+G+ P+ ++ GL TV WY DN WW PL P Sbjct: 281 VDITKIREELGYAPRIGLDEGLASTVAWYRDNRDWWEPLKARGTP 325 >gi|239944856|ref|ZP_04696793.1| dehydratase [Streptomyces roseosporus NRRL 15998] gi|239991322|ref|ZP_04711986.1| dehydratase [Streptomyces roseosporus NRRL 11379] gi|291448318|ref|ZP_06587708.1| sugar dehydratase/epimerase [Streptomyces roseosporus NRRL 15998] gi|291351265|gb|EFE78169.1| sugar dehydratase/epimerase [Streptomyces roseosporus NRRL 15998] Length = 349 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 212/336 (63%), Gaps = 22/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV---NDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 MR++VTGGAGFIGS R L+ + L + V V+D LTYAGN +L ++ +F+ Sbjct: 1 MRVLVTGGAGFIGSCFARLLLGPDSPLPVTAVTVLDALTYAGNRENLAPVAADARLTFVH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + + + DA+V+FAAESHVDRSIL A F+ TN++GT ILL+ Sbjct: 61 GDIRDAALVDTLVA--GQDAVVHFAAESHVDRSILDASAFVGTNVVGTQILLDAAL---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + FL +STDEVYGS++KG ED P P+SPY+A+KASSD + LA+ T+G Sbjct: 115 -----RHGLGTFLHVSTDEVYGSVEKGSSREDHPLLPTSPYAASKASSDLIALAYHRTHG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V ++ CSNNYGP+ FPEKLIPL TR+++G V LYGDG NVRDWL+VEDH RAL V Sbjct: 170 LDVRVTRCSNNYGPHQFPEKLIPLFATRLLDGRTVPLYGDGGNVRDWLHVEDHCRALCAV 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L GR GE YNIGG E N D+ LLD + E + + DR GHD RY++ Sbjct: 230 LTDGRPGEIYNIGGGTELSNRDLTR---LLLDI----CGAGWESVELVTDRKGHDLRYSV 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DS KI+ E+GW P+ M++GL TV WY N W+ Sbjct: 283 DSGKIRDELGWTPRNTMDTGLAATVAWYRRNRDHWQ 318 >gi|229010611|ref|ZP_04167812.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides DSM 2048] gi|228750655|gb|EEM00480.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides DSM 2048] Length = 323 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + + +++ D LTY+GNLN++K I ++ +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLKNYETYKIINYDALTYSGNLNNVKSIQENPNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVVKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KASSD + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASSDMIALSYYETYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ VL Sbjct: 172 VIITRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDTVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGCVGEVYNIGGNNEKTNVDVVEQIIKLLGKT-------KKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY +N WW+PL Sbjct: 285 QKMKNEFEWEPKYTFEQGLKETVEWYKNNVDWWKPL 320 >gi|257126939|ref|YP_003165053.1| dTDP-glucose 4,6-dehydratase [Leptotrichia buccalis C-1013-b] gi|257050878|gb|ACV40062.1| dTDP-glucose 4,6-dehydratase [Leptotrichia buccalis C-1013-b] Length = 401 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 56/380 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTG AGFIG+ +Y+++ K I+V+V+D LTYAGNL ++ E + +F +V+I Sbjct: 5 LVTGAAGFIGANYLKYILSKYKNEEIKVIVVDILTYAGNLGTIAEEIKDERVTFEKVNIR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I E + D +VNFAAESHVDRSI F+ TNI+GT LLE + W+ + Sbjct: 65 DQKEIDRIFSENEIDFVVNFAAESHVDRSIENPQIFLETNILGTQNLLENAKKAWTIVKD 124 Query: 121 DK-----KDQFRFLQISTDEVYGSLDK------------------------------GLF 145 + K+ ++LQ+STDEVYGSL K F Sbjct: 125 ENGYPVYKNGVKYLQVSTDEVYGSLSKDYDTAIDLVIDDKEVKKVVKNRTNLKTYGKNFF 184 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +E +P SPYSA+KAS+D++V+A+G TY +P+ ++ CSNNYGPYHFPEKLIPL I + Sbjct: 185 TEKTSLDPRSPYSASKASADHIVIAYGETYKMPINITRCSNNYGPYHFPEKLIPLMIKNV 244 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 +EG + +YG G NVRDWLYVEDH + + LVL+ + YNIGG NE +NI+IV Sbjct: 245 LEGKKLPVYGKGDNVRDWLYVEDHCKGIELVLRNADAYQIYNIGGFNEEQNINIV---KL 301 Query: 266 LLDALIPKSYSHTE---------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++D L + S+ E LI +++DR GHD RYAID SKI ++GW+P+ Sbjct: 302 VIDILKEEIESNDEYKKVLKTDLQNINYDLITYVQDRLGHDMRYAIDPSKIARDLGWYPE 361 Query: 311 ENMESGLNKTVCWYLDNNWW 330 + E+G+ KTV WYL++ W Sbjct: 362 TDFETGIRKTVKWYLEHQDW 381 >gi|327313558|ref|YP_004328995.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola F0289] gi|326944354|gb|AEA20239.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola F0289] Length = 384 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 163/358 (45%), Positives = 225/358 (62%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ D I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYLDDDIKVIILDALTYAGNLGTIKDDIDDKRCFFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I E D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRELIDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P +P SPYSA+K S+D+ V+A+ Sbjct: 125 DGQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEQTPLSPHSPYSASKTSADHFVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMKNIDIVKLTIKTIHDMMEKDKSLRSILRKQVKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI + DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L++ W Sbjct: 305 IDWINNDLITHVPDRLGHDARYAIDPAKIKNELGWYPETLFADGIVKTIRWNLEHQDW 362 >gi|256028457|ref|ZP_05442291.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] gi|289766378|ref|ZP_06525756.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] gi|289717933|gb|EFD81945.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. D11] Length = 399 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/376 (42%), Positives = 230/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKYEDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+G LL+ + W+ +S+D+ Sbjct: 65 KEIERIFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGIQNLLDNAKKSWT-VSKDE 123 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 124 NGYPVYREGVKYLQVSTDEVYGSLSKDYNEPIELMIDDEAVKKVVKNRKNLKTYGDKFFT 183 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 184 EESPVDPRSPYSASKTGADHIVIAYGKTYKLPINITRCSNNYGPYQFPEKLIPLMIKNIL 243 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV + + Sbjct: 244 EGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIVKLVIDI 303 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYAI+ SKI ++GW+P+ + E Sbjct: 304 LKEEITNNDEYKKVLKTDISNISYDLITYVQDRLGHDMRYAINPSKIAKDLGWYPETDFE 363 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KT WYL+N W Sbjct: 364 TGIRKTAKWYLENQDW 379 >gi|167770813|ref|ZP_02442866.1| hypothetical protein ANACOL_02164 [Anaerotruncus colihominis DSM 17241] gi|167666853|gb|EDS10983.1| hypothetical protein ANACOL_02164 [Anaerotruncus colihominis DSM 17241] Length = 339 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 211/337 (62%), Gaps = 23/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y+ +L +DKLTYAGNL +L + + F F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFIFYMQKKHPDYNLLCVDKLTYAGNLATLAPVMEDPKFKFIRADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 RE I + +PD +VNFAAESHVDRSI F+ TN++GT +LL+ R Sbjct: 61 AGREAIYGIFEAERPDIVVNFAAESHVDRSIEDPAIFLKTNVMGTQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG LD+ F+E P + SSPYSA+KA++D L A+ TY Sbjct: 114 --KYGISRYHQVSTDEVYGDLPLDRPDLFFTEQTPLHTSSPYSASKAAADLLCNAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ +S CSNNYGPY FPEKLIPL I + + +YG G NVRDWLYVEDH A+ Sbjct: 172 GLPITISRCSNNYGPYQFPEKLIPLMIANALANKPLPVYGQGLNVRDWLYVEDHCVAIDR 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 +L++G+ G+ YNIGG+NE +NIDIV LI ++ E LI ++ DR GHD RY Sbjct: 232 ILERGQAGQTYNIGGHNEMRNIDIV--------KLICRALGKPESLITYVTDRKGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 AID + I ++GW P G+ +T+ WYL+N WW Sbjct: 284 AIDPTFIHEQLGWLPATKFSDGIQRTIEWYLNNRSWW 320 >gi|229132119|ref|ZP_04260978.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST196] gi|228651339|gb|EEL07315.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus BDRD-ST196] Length = 323 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + + +++ D LTY+GNLN++K I ++ +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLKNYETYKIINYDALTYSGNLNNVKSIQENPNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVVKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KASSD + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASSDMIALSYYETYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ VL Sbjct: 172 VVVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDTVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGCVGEVYNIGGNNEKTNVDVVEQIIKLLGKT-------KKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY +N WW+PL Sbjct: 285 QKMKNEFEWEPKYTFEQGLKETVEWYKNNVDWWKPL 320 >gi|302865680|ref|YP_003834317.1| dTDP-glucose 4,6-dehydratase [Micromonospora aurantiaca ATCC 27029] gi|302568539|gb|ADL44741.1| dTDP-glucose 4,6-dehydratase [Micromonospora aurantiaca ATCC 27029] Length = 333 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 156/345 (45%), Positives = 214/345 (62%), Gaps = 29/345 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-----------DLKIQVLVIDKLTYAGNLNSLKEISQS 49 MR++VTGGAGFIGS R L+ + + V+DKLTY+GNL +L + Sbjct: 1 MRILVTGGAGFIGSEYVRMLLGVPGGDASGVPVEDPAALTVLDKLTYSGNLANLAPVRDD 60 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F++ DICD + + D IV+FAAESHVDRSI GA F+TTN++GT LL+ Sbjct: 61 PRLRFVRGDICDPALVDEVVPGH--DVIVHFAAESHVDRSITGAAPFVTTNVLGTQTLLD 118 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + RF+ +STDEVYGS+D G ++ED P P+SPYSA+KA SD L L Sbjct: 119 AAL---------RHGISRFVHVSTDEVYGSIDSGSWTEDWPLAPNSPYSASKAGSDLLAL 169 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ T+G+ V+++ CSNNYGPY FPEK++PL +T +++G V LYGDG NVRDWL+V DH Sbjct: 170 SYHRTHGLDVVVTRCSNNYGPYQFPEKVVPLFVTNLLDGGTVPLYGDGGNVRDWLHVHDH 229 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 R + +V +KGR GE Y+IGG E N L + L+ + + + + DR G Sbjct: 230 CRGVAMVQEKGRAGEVYHIGGGTELTNRQ-------LTERLLATCGAGWDRVVPVTDRKG 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 HDRRY++D KI SE+G+ P +++ GL +TV WY DN WW PL Sbjct: 283 HDRRYSLDIGKISSELGYAPSIDLDRGLAETVRWYRDNRAWWEPL 327 >gi|323344540|ref|ZP_08084765.1| 2-isopropylmalate synthase [Prevotella oralis ATCC 33269] gi|323094667|gb|EFZ37243.1| 2-isopropylmalate synthase [Prevotella oralis ATCC 33269] Length = 382 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 169/386 (43%), Positives = 235/386 (60%), Gaps = 40/386 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDL----KIQVLVIDKLTYAGNLNSLK-EISQSNLFSFLQVD 58 +VTGGAGFIG+ +YL+N I+++V+D LTYAGNL ++K +I F F++ D Sbjct: 5 LVTGGAGFIGANYIKYLLNKKYPTEDIKIIVLDALTYAGNLGTIKGDIDNKRCF-FVKGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR + D +VNFAAESHVDRSI F++ NI+GT LL+ R W Sbjct: 64 IRDRALTDRLFADNDIDFVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTG 123 Query: 119 SQDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + K RF Q++TDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 124 KDAEGYPVWKSGKRFHQVATDEVYGSLGAEGYFTEQTPVCPHSPYSASKTSADLIVMAYH 183 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G N+RDWLYVEDH +A Sbjct: 184 DTYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKQLPVYGKGDNIRDWLYVEDHCKA 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------I 271 + +V+++G+ GE YN+GG+NE KNIDIV I + D + I Sbjct: 244 IDMVVRQGKEGEIYNVGGHNEMKNIDIVKLTIKTIHDMMSSDKELRKVLKKQVKDEHGDI 303 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + + +LI F+ DR GHD+RYAID +KIK+++GW+P+ G+ KT+ W L+N W Sbjct: 304 SIDWINDKLITFVADRLGHDQRYAIDPTKIKNDLGWYPETMFAEGIVKTIRWNLENQAWI 363 Query: 332 RPLYKELKPDNDYSKWKNLNEMSCNR 357 + + DY K+ +M NR Sbjct: 364 KEV-----TSGDYRKY--YEQMYGNR 382 >gi|149185657|ref|ZP_01863973.1| dTDP-glucose 4,6-dehydratase [Erythrobacter sp. SD-21] gi|148830877|gb|EDL49312.1| dTDP-glucose 4,6-dehydratase [Erythrobacter sp. SD-21] Length = 351 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 165/350 (47%), Positives = 227/350 (64%), Gaps = 24/350 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ Y + +++V+D LTYAG +++E+ +L ++ DI + Sbjct: 5 ILVTGGAGFIGTNFVHYWQKQYRDDRIIVLDSLTYAGVAANVEELENVHL---VRGDIRN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L++ D IV+FAAESHVDRSI G D FI TNIIGT LL+ +R + LS D Sbjct: 62 TSLVENLLRDHDIDTIVHFAAESHVDRSIEGPDSFIETNIIGTHSLLKASRNVF--LSND 119 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF +STDEVYGSL D+ FSE+ Y P+SPYSA+KA+SD+LV A+ TYG+ V Sbjct: 120 GRPH-RFHHVSTDEVYGSLEPDEPAFSEESRYRPNSPYSASKAASDHLVRAYHQTYGLQV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SNCSNNYGPY FPEKLIPL + + ++ +YGDG NVRDWL+V+DH R + LVLK+ Sbjct: 179 TTSNCSNNYGPYQFPEKLIPLFLINCLHDRNLPIYGDGMNVRDWLHVDDHCRGIDLVLKR 238 Query: 240 GRIGERYNIGGNNERKNIDIV----------FEIGFLLDALIPKSYSH-----TELIRFI 284 G IGE YNIGG E N++++ F L L P++ + T L F+ Sbjct: 239 GCIGETYNIGGGVELPNLELIDRLCGVVDDAFATSPELAELFPEAPAARGEPTTSLKIFV 298 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +DR GHDRRYAID K ++E+G+ P+ + ++GL T+ WYL+N WWR L Sbjct: 299 DDRAGHDRRYAIDERKARAELGYQPKTDFDAGLRSTLVWYLENESWWRRL 348 >gi|163939117|ref|YP_001644001.1| dTDP-glucose 4,6-dehydratase [Bacillus weihenstephanensis KBAB4] gi|163861314|gb|ABY42373.1| dTDP-glucose 4,6-dehydratase [Bacillus weihenstephanensis KBAB4] Length = 323 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 222/336 (66%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + + +++ D LTY+GNLN++K I ++ +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLKNYETYKIINYDALTYSGNLNNVKSIQENPNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVVKECDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E+ P P+SPYS++KASSD + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFTEETPLAPNSPYSSSKASSDMIALSYYETYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ VL Sbjct: 172 VIITRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDTVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE+ NID+V +I +L + I F+ DR GHDRRYAID+ Sbjct: 232 KGCVGEVYNIGGNNEKTNIDVVEQIIKILGKT-------KKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY +N WW+PL Sbjct: 285 QKMKNEFEWEPKYTFEQGLKETVEWYKNNVDWWKPL 320 >gi|167765916|ref|ZP_02437969.1| hypothetical protein CLOSS21_00407 [Clostridium sp. SS2/1] gi|317498844|ref|ZP_07957130.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 5_1_63FAA] gi|167712414|gb|EDS22993.1| hypothetical protein CLOSS21_00407 [Clostridium sp. SS2/1] gi|291559814|emb|CBL38614.1| dTDP-glucose 4,6-dehydratase [butyrate-producing bacterium SSC/2] gi|316893872|gb|EFV16068.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 5_1_63FAA] Length = 340 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG ++VN +++ +D LTYAGNL +LK + + F++ DI Sbjct: 1 MKILVTGGAGFIGGNFVHHMVNKYPDYEIVNLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE I ++ + D +VNFAAESHVDRSI F+ TN+ GT +LL+ + Sbjct: 61 ADREFIMDLFEKEKFDIVVNFAAESHVDRSIEDPSIFVKTNVEGTVVLLDAAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F+E P + SSPYS++KAS+D VLA+ T+ Sbjct: 114 --KYGVKRYHQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSSSKASADLFVLAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEELPVYGKGENVRDWLHVSDHCEAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ KG++GE YN+GG+NER N+++V I LD P+S LI+F+ DRPGHD RYA Sbjct: 232 IIHKGKVGEVYNVGGHNERTNLEVVKTILKALDK--PES-----LIKFVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ N ++G+ +T+ WYL+N WW+ Sbjct: 285 IDPTKLETELGWEPKYNFDTGIAQTIEWYLNNKEWWQ 321 >gi|270291341|ref|ZP_06197563.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici 7_4] gi|270280187|gb|EFA26023.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici 7_4] Length = 331 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 217/330 (65%), Gaps = 8/330 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ V K + L +DKLTYA NL++L +SQ + + F + DI Sbjct: 1 MRILVTGGAGFIGANFMNMWVPRRPKFEFLNLDKLTYAANLDNLT-VSQESNYHFCRGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR +R + F+P+ ++NFAAESHVD+SI +FITTN+ GTF L+EE + W+ Sbjct: 60 ADRSQVRQIFQNFRPEVVINFAAESHVDQSIADPAKFITTNVNGTFNLIEEFKELWAEDY 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF Q+STDEVYG L G F+E PY PSSPYSA+KAS+D LV ++G T+G+P Sbjct: 120 THK----RFHQVSTDEVYGFLGATGSFTEASPYQPSSPYSASKASADLLVQSYGRTFGVP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++N SNN+GPY PEKLIP I + G + LYG G+NVRDWLYV DH A++ V+ Sbjct: 176 ISITNASNNFGPYQHPEKLIPKVIFNALRGEPIPLYGTGENVRDWLYVSDHCEAIWQVVF 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 + + G +N+G ++ N +V E+ +L + K +T+L++ ++DRPGHD RYAID Sbjct: 236 QAKPGAHFNVGADHPLSNQQLVGELLAILAEMTGKPVEQYTQLVQHVKDRPGHDFRYAID 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +S ++ ++GW PQ +GL TV +YL Sbjct: 296 ASLLEQQLGWQPQTEFPAGLRATVDFYLQQ 325 >gi|310820808|ref|YP_003953166.1| dTDP-glucose 4,6-dehydratase [Stigmatella aurantiaca DW4/3-1] gi|309393880|gb|ADO71339.1| dTDP-glucose 4,6-dehydratase [Stigmatella aurantiaca DW4/3-1] Length = 339 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 172/333 (51%), Positives = 223/333 (66%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGG GFIGS L +YL + +V+ +DKLTYAGNL +L E+ F++ DI Sbjct: 1 MNVLVTGGCGFIGSNLVKYLRKHRPEWKVVNLDKLTYAGNLENLSELEGDPKHVFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ I L + DA+++ AAESHVDRSILG + F+TTN++GT LLE R Sbjct: 61 GSQDLIEHLLVQHSIDAVMHLAAESHVDRSILGPEVFVTTNVLGTQRLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL +STDEVYGSL G F+E P PSSPYS++K SSD + LA+ HT+G+ Sbjct: 114 --SRGLKRFLMVSTDEVYGSLGPTGAFTEQSPLQPSSPYSSSKTSSDLISLAYHHTFGLD 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYG Y FPEKLIPL + + + +YGDG NVRDWL+VEDH AL L+ Sbjct: 172 VVVTRCSNNYGRYQFPEKLIPLMVVNALHDKPLPVYGDGGNVRDWLHVEDHCSALLHALE 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YNIGG ERKNIDIV + LL P+S LI+F++DRPGHDRRYAID Sbjct: 232 KGKAGEVYNIGGGAERKNIDIVKAVLGLLGK--PES-----LIKFVKDRPGHDRRYAIDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SKIK+E+GW P + E GL +TV WY+D+ WW Sbjct: 285 SKIKAELGWTPSQTFEQGLAETVKWYVDHPSWW 317 >gi|304385094|ref|ZP_07367440.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici DSM 20284] gi|304329288|gb|EFL96508.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici DSM 20284] Length = 331 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 218/330 (66%), Gaps = 8/330 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ V K + L +DKLTYA NL++L +SQ + + F + DI Sbjct: 1 MRILVTGGAGFIGANFMNMWVPRRPKFEFLNLDKLTYAANLDNLT-VSQESNYHFCRGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR +R ++F+P+ ++NFAAESHVD+SI +FITTN+ GTF L+EE + W+ Sbjct: 60 ADRSQVRQIFQDFRPEVVINFAAESHVDQSIADPAKFITTNVNGTFNLIEEFKELWAEDY 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF Q+STDEVYG L G F+E PY PSSPYSA+KAS+D LV ++G T+G+P Sbjct: 120 THK----RFHQVSTDEVYGFLGATGSFTEASPYQPSSPYSASKASADLLVQSYGRTFGMP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++N SNN+GPY PEKLIP I + G + LYG G+NVRDWLYV DH A++ V+ Sbjct: 176 ISITNASNNFGPYQHPEKLIPKVIFNALRGEPIPLYGTGENVRDWLYVSDHCEAIWQVVF 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYAID 297 + + G +N+G ++ N +V E+ +L + K +T+L++ ++DRPGHD RYAID Sbjct: 236 QAKPGAHFNVGADHPLSNQQLVGELLAILAEMTGKPVEQYTQLVQHVKDRPGHDFRYAID 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +S ++ ++GW PQ +GL TV +YL Sbjct: 296 ASLLEQQLGWQPQTEFPAGLRATVDFYLQQ 325 >gi|220913156|ref|YP_002488465.1| dTDP-glucose 4,6-dehydratase [Arthrobacter chlorophenolicus A6] gi|219860034|gb|ACL40376.1| dTDP-glucose 4,6-dehydratase [Arthrobacter chlorophenolicus A6] Length = 332 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 210/337 (62%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIGS Y++ + V V+DKLTYAGNL SL+ + + + F+F++ DI Sbjct: 2 QRLLVTGGAGFIGSNFVHYVLENTDDHVTVLDKLTYAGNLESLRGLPE-DRFTFVEGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 61 DAGIVDGLVA--GTDVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF ISTDEVYG L D F+E PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 --KHNKRFHHISTDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++ DH A+ ++ Sbjct: 169 QATISNCSNNYGPYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAII 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG IGE Y IG + E+ N D+V E+ L P +Y H + DRPGHD RYAID Sbjct: 229 AKGTIGETYLIGADGEKNNKDVV-ELILKHMGLAPDAYDH------VVDRPGHDLRYAID 281 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 S+K+++E+GW PQ N ++G+ T+ WY +N WWRP Sbjct: 282 STKLRNELGWEPQFSNFDAGIEDTIDWYRNNEQWWRP 318 >gi|115374645|ref|ZP_01461923.1| dTDP-glucose 4,6-dehydratase [Stigmatella aurantiaca DW4/3-1] gi|115368313|gb|EAU67270.1| dTDP-glucose 4,6-dehydratase [Stigmatella aurantiaca DW4/3-1] Length = 349 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 172/333 (51%), Positives = 224/333 (67%), Gaps = 18/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGG GFIGS L +YL + + +V+ +DKLTYAGNL +L E+ F++ DI Sbjct: 11 MNVLVTGGCGFIGSNLVKYLRKHRPEWKVVNLDKLTYAGNLENLSELEGDPKHVFVRGDI 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ I L + DA+++ AAESHVDRSILG + F+TTN++GT LLE R Sbjct: 71 GSQDLIEHLLVQHSIDAVMHLAAESHVDRSILGPEVFVTTNVLGTQRLLEAAR------- 123 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL +STDEVYGSL G F+E P PSSPYS++K SSD + LA+ HT+G+ Sbjct: 124 --SRGLKRFLMVSTDEVYGSLGPTGAFTEQSPLQPSSPYSSSKTSSDLISLAYHHTFGLD 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYG Y FPEKLIPL + + + +YGDG NVRDWL+VEDH AL L+ Sbjct: 182 VVVTRCSNNYGRYQFPEKLIPLMVVNALHDKPLPVYGDGGNVRDWLHVEDHCSALLHALE 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+ GE YNIGG ERKNIDIV + LL P+S LI+F++DRPGHDRRYAID Sbjct: 242 KGKAGEVYNIGGGAERKNIDIVKAVLGLLGK--PES-----LIKFVKDRPGHDRRYAIDP 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SKIK+E+GW P + E GL +TV WY+D+ WW Sbjct: 295 SKIKAELGWTPSQTFEQGLAETVKWYVDHPSWW 327 >gi|218885249|ref|YP_002434570.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756203|gb|ACL07102.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 340 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 212/335 (63%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSN---LFSFLQ 56 MRL+VTGG GFIG+ R +++ + V+ +DKLTYAGN +L ++ +++ + F Sbjct: 1 MRLLVTGGCGFIGTNFVRLVIDRRPDVTVVNLDKLTYAGNPLNLADVEKTHGGTRYFFEH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +R L + + DA+VNFAAE+HVDRSI F+ TN++GT LL R Sbjct: 61 ADIADADAVRRILAQHRIDAVVNFAAETHVDRSIDDPAPFVVTNVLGTQTLLTAAR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYG+L +G F+E P P+SPYSA+KA+ D + AW TY Sbjct: 117 -----EAGVTRFVHVSTDEVYGTLGPEGRFTESTPLAPNSPYSASKAAGDLMARAWFETY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G PV+++ CSNNYGPY FPEKLIPL I R + +YGDG NVRDW++V+DH R + L Sbjct: 172 GYPVVITRCSNNYGPYQFPEKLIPLMIGRAGRDETLPVYGDGMNVRDWIHVDDHCRGVLL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+KGR G YN GG ER NI +V I L+ P+S LIR + DRPGHDRRYA Sbjct: 232 ALEKGRPGAVYNFGGAAERPNIKVVRAILRLVGK--PES-----LIRHVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D S E+G+ P+ + E GL +TV WY +N W Sbjct: 285 MDFSLAAQELGYTPEYDFERGLAETVAWYRNNAAW 319 >gi|303233406|ref|ZP_07320075.1| dTDP-glucose 4,6-dehydratase [Atopobium vaginae PB189-T1-4] gi|302480535|gb|EFL43626.1| dTDP-glucose 4,6-dehydratase [Atopobium vaginae PB189-T1-4] Length = 367 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 156/348 (44%), Positives = 210/348 (60%), Gaps = 26/348 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS Y+++ +V +D LTYAGNL +L + + + F DI D Sbjct: 5 LVTGGAGFIGSNFILYMLSHHSDCAIVNVDALTYAGNLENLTSVENDDRYHFEHADIRDA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I + L+ + PD ++NFAAESHVDRSI F+ TN++GT +L R W +K Sbjct: 65 QAITAILQRYNPDIVINFAAESHVDRSIENPTLFVDTNVLGTVTMLNCCRAAW-----EK 119 Query: 123 KD----QFRFLQISTDEVYGSL----------------DKGLFSEDMPYNPSSPYSATKA 162 D RFL +STDEVYG+L + F ED P SPYSA+KA Sbjct: 120 PDGSYGNHRFLHVSTDEVYGALSLNHPMNPNGSPACPEETDYFYEDTPLAGHSPYSASKA 179 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S+D A+ TY P +++ CSNNYGPY FPEKLIPL I + + +YGDG NVRD Sbjct: 180 SADLFARAYYTTYKFPSVVTRCSNNYGPYQFPEKLIPLMIHNALHHKELPVYGDGLNVRD 239 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 WLYV+DH +A+ +V K GR+GE YN+GG+NER NI IV I L + + + +LIR Sbjct: 240 WLYVDDHCKAIDMVSKNGRLGEAYNVGGHNERSNIYIVKTIIQQLHDITGDAAINEDLIR 299 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++ DR GHDRRY I+ +KIK E+GW P+ E G+ T+ WYL++ W Sbjct: 300 YVTDRKGHDRRYGIEPAKIKRELGWEPETPYEDGIRATITWYLEHQQW 347 >gi|302524295|ref|ZP_07276637.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. AA4] gi|302433190|gb|EFL05006.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. AA4] Length = 330 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 216/342 (63%), Gaps = 29/342 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R +++ +V+V+DKLTYAGN +L ++ S F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRQVLSGAYPTLADAEVVVLDKLTYAGNEANLAPVADSPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETR 112 + DICD + + D +V+FAAESHVDRSILG+ +F+ TN++GT LL+ E R Sbjct: 61 RGDICDTAQVTELMNGV--DLVVHFAAESHVDRSILGSADFVLTNVLGTQTLLQAALEAR 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + +F+ +STDEVYGS+ G +SED P+SPYSA+KASSD + ++ Sbjct: 119 VG------------KFVHVSTDEVYGSIQDGSWSEDHVLEPNSPYSASKASSDLIARSYF 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 T+G+PV ++ CSNNYGPY FPEK+IPL T +++G V LYGDG NVRDWL+V+DH Sbjct: 167 RTHGLPVCVTRCSNNYGPYQFPEKVIPLFATNLLDGKKVPLYGDGLNVRDWLHVDDHCHG 226 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + LV GR GE YNIGG E N + L + L+ E++ + DR GHDR Sbjct: 227 IQLVADGGRPGEIYNIGGGTELTNRE-------LTERLLAAVGVGWEMVEPVADRKGHDR 279 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RY++D +KI E+G+ P+ + E GL +TV WY DN WW PL Sbjct: 280 RYSVDIAKISGELGYAPRVSFEDGLAETVRWYADNRAWWEPL 321 >gi|300782936|ref|YP_003763227.1| dTDP-glucose 4,6-dehydratase [Amycolatopsis mediterranei U32] gi|299792450|gb|ADJ42825.1| dTDP-glucose 4,6-dehydratase [Amycolatopsis mediterranei U32] Length = 329 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 213/339 (62%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R ++ +V+V+DKLTYAGN +L ++ F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRQVLTGAYPTLRDAEVVVLDKLTYAGNEANLAPVAADPRLKFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD + + D +V+FAAESHVDRSILGA +F+ TN++GT LL+ Sbjct: 61 RGDICDTALVTEVMTGV--DLVVHFAAESHVDRSILGAADFVLTNVLGTQNLLQAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + +F+ +STDEVYGS++ G ++ED P+SPYSA+KASSD + ++ T+ Sbjct: 116 ------EAGVGKFVHVSTDEVYGSIEHGSWTEDHLLEPNSPYSASKASSDLVARSFFRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY FPEK+IPL +T +++G V LYGDG NVRDWL+V+DH + L Sbjct: 170 GLPVCITRCSNNYGPYQFPEKVIPLFVTSLLDGGKVPLYGDGLNVRDWLHVDDHCHGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V GR GE YNIGG E N L + L+ + + + +EDR GHDRRY+ Sbjct: 230 VADGGRPGEIYNIGGGTELTNRS-------LTEKLLEAVGASWDSVEPVEDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI E+G+ P+ + E GL TV WY DN WW PL Sbjct: 283 VDITKISRELGYAPRVSFEDGLAATVAWYRDNRAWWEPL 321 >gi|325109318|ref|YP_004270386.1| dTDP-glucose 4,6-dehydratase [Planctomyces brasiliensis DSM 5305] gi|324969586|gb|ADY60364.1| dTDP-glucose 4,6-dehydratase [Planctomyces brasiliensis DSM 5305] Length = 349 Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 214/333 (64%), Gaps = 21/333 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI----QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++VTGG+GFIGS R L+ D + +++ DKLTYAGN +L ++ + F+ D Sbjct: 11 ILVTGGSGFIGSNFIRLLLTDEGLLDDCRIVNYDKLTYAGNPENLSDLEGDERYEFVHAD 70 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD E + ALK ++ DA+V+FAAESHVDRSIL + FI TN++GT ILL+ R Sbjct: 71 ICDPEAVERALKTYEIDAVVHFAAESHVDRSILDSSPFIHTNVVGTQILLDACR------ 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF+Q+STDEVYGSL G F+E+ P P+SPYSA+KAS+D LV ++ T+ Sbjct: 125 ---RVGVSRFVQVSTDEVYGSLPASGFFTEETPLAPNSPYSASKASADLLVRSYCQTFDF 181 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++ CSNNYGPY FPEKLIPL IT + + +YGDG+ +RDW++V DH R + L Sbjct: 182 PGIITRCSNNYGPYQFPEKLIPLFITNAMNDQPLPVYGDGRQIRDWIHVVDHCRGVLAAL 241 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G+ G+ YN GG E +N+ + + +L P+S LI F++DRPGHDRRYAID Sbjct: 242 LNGQPGQVYNFGGLCELENLVLTSTLLRVLGK--PES-----LITFVKDRPGHDRRYAID 294 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K E+ W PQ + + GL +TV WYL NN W Sbjct: 295 CRKAAEELAWQPQISFKQGLEETVEWYLSNNEW 327 >gi|326402836|ref|YP_004282917.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325049697|dbj|BAJ80035.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 331 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 147/309 (47%), Positives = 203/309 (65%), Gaps = 3/309 (0%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 +V+ +DK+TYA + ++L ++ DI D +R+ + +PD +++ AAESHV Sbjct: 7 EVVTVDKMTYAASEDALGAALGHPRHRLIRADIADAAAMRAVFEAHRPDIVMHLAAESHV 66 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG--L 144 DRSI G +FI TNI GTF+LLE R W++ L + + +FRF ISTDEV+G+L++G Sbjct: 67 DRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRFHHISTDEVFGALEQGDPP 126 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+E PY+P SPY+A+KA+SD+LV AW HTYG+P ++SN +NNYGP+ FPEKLIPL + Sbjct: 127 FTETTPYDPRSPYAASKAASDHLVRAWRHTYGLPAIVSNTTNNYGPWQFPEKLIPLVLIN 186 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 +EG + +YGDG N+RDWL+VEDH AL + G GE Y IG R N+D+V I Sbjct: 187 ALEGRPLPVYGDGSNLRDWLFVEDHAEALLAIALTGTPGETYAIGARQPRSNLDVVRAIC 246 Query: 265 FLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 LLDA P E LI F+ DRPGHD RY ID ++ ++ + W + E+GL +TV W Sbjct: 247 RLLDARRPDPAGPRERLITFVADRPGHDFRYEIDPARSEAALAWRAAHDFEAGLARTVDW 306 Query: 324 YLDNNWWWR 332 YL N WWR Sbjct: 307 YLANEPWWR 315 >gi|168179763|ref|ZP_02614427.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum NCTC 2916] gi|182669422|gb|EDT81398.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum NCTC 2916] Length = 326 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 208/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F++ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SGEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+G TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHDRRYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK+++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKNQLSWACSYKLEEGIKETIEWYKNNQTWW 324 >gi|170781063|ref|YP_001709395.1| putative sugar dehydratase [Clavibacter michiganensis subsp. sepedonicus] gi|169155631|emb|CAQ00749.1| putative sugar dehydratase [Clavibacter michiganensis subsp. sepedonicus] Length = 329 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 161/339 (47%), Positives = 219/339 (64%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R+ + D V+V+D LTY+GNL +L +S S ++F+ Sbjct: 1 MRILVTGGAGFIGSNFVRHALQDHYAGLEGADVVVLDALTYSGNLENLAPVSDSPRYTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DI D + + Q DA+V+FAAESHVDRS+ A F+ TN++GT LL+ Sbjct: 61 QGDIRDDAVLDEWIP--QVDAVVHFAAESHVDRSVRDASIFVETNVLGTQKLLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L D K RF+ +STDEVYGS+ +G + E+ P P+SPYSA+KA SD L ++ T+ Sbjct: 113 AALRHDLK---RFVHVSTDEVYGSIAEGSWDEERPLEPNSPYSASKAGSDLLARSYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPYHFPEK+IPL +T +I+ HV LYG+G N+RDWL+V+DH R + L Sbjct: 170 GLNVSITRCSNNYGPYHFPEKVIPLFVTNLIDDKHVPLYGEGLNIRDWLHVDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +G GE YNIGG E N ++ LLDA + +S+ + +EDR GHD RY+ Sbjct: 230 VLVQGAPGEIYNIGGGTELTNRELT---QLLLDA-TGRDWSYVDR---VEDRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI+ E+G+ PQ GL V WY DN WW PL Sbjct: 283 VDISKIQRELGYAPQVPFAEGLADVVQWYRDNRAWWEPL 321 >gi|120602748|ref|YP_967148.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris DP4] gi|120562977|gb|ABM28721.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris DP4] Length = 340 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 163/336 (48%), Positives = 214/336 (63%), Gaps = 23/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQ 56 MRL+VTGG GFIG+ R+ L ++ V+ DKLTYAGN +L +I N + F Sbjct: 1 MRLLVTGGCGFIGTNFIRHVLAVRPEVSVVNFDKLTYAGNPANLTDIEGEHGGNRYRFEH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R L+ DAIVNFAAE+HVDRSI + FITTN++GT +LL+ + Sbjct: 61 GDIADAGRVRDILERHAIDAIVNFAAETHVDRSINDSTPFITTNVLGTQVLLQ------A 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L + RF+ ISTDEVYG+L GLF ED P P+SPYSA+KA +D +V A+ TY Sbjct: 115 ALDRGIP---RFVHISTDEVYGTLGPDGLFREDTPLAPNSPYSASKAGADLMVRAFHETY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + + CSNNYGPY FPEKLIPL + G + +YGDG NVRDW++VEDH R + L Sbjct: 172 GLDTVTTRCSNNYGPYQFPEKLIPLMYRKATAGEPLPVYGDGGNVRDWIHVEDHCRGVLL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRY 294 L+KGR G YN GG +ER N+++V LI K T ELIRF++DRPGHDRRY Sbjct: 232 ALEKGRPGGIYNFGGASERTNLEVV--------RLILKLTGRTEELIRFVKDRPGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+D + E+G+ P+ + E+GL T+ WY N+ W Sbjct: 284 AMDFTLAARELGYAPEHSFENGLAATIDWYRANDAW 319 >gi|225010347|ref|ZP_03700819.1| dTDP-glucose 4,6-dehydratase [Flavobacteria bacterium MS024-3C] gi|225005826|gb|EEG43776.1| dTDP-glucose 4,6-dehydratase [Flavobacteria bacterium MS024-3C] Length = 348 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 211/334 (63%), Gaps = 10/334 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGGAGFIGS + R V ++ +D LTYAGNL +LK+I Q ++F++ I Sbjct: 1 MSLLITGGAGFIGSHVVRLFVQKYPDYHIINLDALTYAGNLENLKDIEQRPNYTFVKGSI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +++ AAESHVDRSI FI TNI GT LL + W Sbjct: 61 TDPLLLDRLFTQHDIKGVIHLAAESHVDRSIKDPMAFIDTNIKGTAALLNACKAHWKSF- 119 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF QISTDEV+G+L G F+E+ PY P+SPYSA+KAS+D+LV A+G TYG+P Sbjct: 120 ----EGRRFYQISTDEVFGALGPTGYFTEESPYAPNSPYSASKASADHLVRAYGETYGLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++SNCSNNYGP HFPEKLIPL I ++EG + +YG+G RDWL+V+DH A+ V Sbjct: 176 YVISNCSNNYGPNHFPEKLIPLCIHNILEGKDLPIYGNGLYTRDWLFVKDHALAIDQVYH 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGHDRRYAI 296 G Y IGG+NE NID++ + +DA I P+ S I F++DRPGHD RYAI Sbjct: 236 NGENAATYLIGGHNEYTNIDLIRLLCDQMDAAIGNPQGTSQKR-ITFVKDRPGHDLRYAI 294 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SKI+ +GW P E+GL T+ WYL+N W Sbjct: 295 DASKIERSLGWTPAHTFEAGLAATIKWYLENPDW 328 >gi|114152767|sp|Q9ZAE8|ACBB_ACTS5 RecName: Full=dTDP-glucose 4,6-dehydratase gi|89241788|emb|CAA77209.2| dTDP-glucose 4,6-dehydratase AcbB [Actinoplanes sp. SE50/110] Length = 320 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 212/337 (62%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKI-----QVLVIDKLTYAGNLNSLKEISQSNLFSF 54 M+++VTGGAGFIGS L++ D+ QV V+DKL Y GNL +L E S FSF Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DICD I + D + +FAAE+HVDRS++ + F+ +N++GT +LL+ Sbjct: 61 VRGDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAAL-- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RFL +STDEVYGS+D G ++E P P+SPY+A+KA SD L LA+ T Sbjct: 117 -------RHHIGRFLHVSTDEVYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQT 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V+++ CSNNYGP FPEK+IPL +TR+++G V +YGDG+N+RDWL+V DH R L Sbjct: 170 HGMDVVVTRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLA 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L L GR GE Y+IGG E N++ L + L+ + I F+ DR GHDRRY Sbjct: 230 LALGAGRAGEVYHIGGGWEATNLE-------LTEILLEACGAPASRISFVTDRKGHDRRY 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++D SKI E+G+ P+ + G+ +TV WY N WW Sbjct: 283 SLDYSKIAGELGYRPRVDFTDGIAETVAWYRANRSWW 319 >gi|4240415|gb|AAD13546.1| NDP-hexose 4,6-dehydratase homolog [Streptomyces cyanogenus] Length = 326 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 219/336 (65%), Gaps = 25/336 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 ++++TGGAGFIGS R L+ND V V+DKLTYAGN ++L E +F+Q Sbjct: 3 KILITGGAGFIGSHYVRTLLNDGYEDWKGAHVTVLDKLTYAGNRDNLPEAHPR--LTFVQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD E + L DA+V+FAAESHVDRS+ A+EF+ TN+ GT LL+ + Sbjct: 61 GDICDFELLLELLPGH--DAVVHFAAESHVDRSLESAEEFVHTNVTGTQRLLD------A 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L+ K R + +STDEVYGS+D+G ++E+ P P+SPYSA+KA+SD L ++ T+G Sbjct: 113 VLATRVK---RVVHVSTDEVYGSIDEGSWTEEWPLAPNSPYSASKAASDLLARSYWRTHG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + ++ CSNNYGPY PEKLIPL +T ++EG V LYGDG N+R+WL+V+DH RA+ LV Sbjct: 170 LDLSITRCSNNYGPYQHPEKLIPLFVTNLLEGEQVPLYGDGGNIREWLHVDDHCRAIDLV 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L KGR GE YNIGG NE+ N I L AL + +S +R + DR HD RY++ Sbjct: 230 LNKGRAGEIYNIGGGNEQTNRAITER----LIALTGQDWSK---VRHVPDRKAHDLRYSL 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D SKI+ E+G+ P+ E GL TV WY DN WW+ Sbjct: 283 DESKIREELGYAPRITFEQGLADTVAWYHDNPGWWK 318 >gi|227546957|ref|ZP_03977006.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212558|gb|EEI80446.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 340 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 214/337 (63%), Gaps = 25/337 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + + V+D LTYAGNL+++K + + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHITVLDALTYAGNLDNIKSL-LGDRVDFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKLVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW T+G+ Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPHKFTEETPYHPSSPYSSTKASSDLLVRAWHRTFGVR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + +SNCSNNYGPY EK IP IT ++EG LYGDG NVRDW++ +DH A++ +L Sbjct: 178 MTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGDGLNVRDWIHTDDHSSAVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE Y IG N ER NI ++ +I ++ P + H ++DRPGHDRRYAIDS Sbjct: 238 KGVLGETYLIGANGERNNITVLKDILEVM-GKSPDDFDH------VKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW P N +SGL T+ WY DN WW P+ Sbjct: 291 TKLQTELGWKPCHTNFQSGLEHTIKWYTDNRDWWEPV 327 >gi|333023951|ref|ZP_08452015.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. Tu6071] gi|81250692|gb|ABB69737.1| PlaA3 [Streptomyces sp. Tu6071] gi|332743803|gb|EGJ74244.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. Tu6071] Length = 323 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 157/338 (46%), Positives = 220/338 (65%), Gaps = 25/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 MRL+VTG AGFIGSA R L+ ++V V+DKLTYAG +++L +++ L SF+Q Sbjct: 1 MRLLVTGAAGFIGSAYVRMLLAPGPVEVSHVTVLDKLTYAGRIDNL-DVTHPRL-SFVQG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD + + + D +V+FAAESHVDRSI GAD F+ TN+ GT LL+ Sbjct: 59 DICDAALVDRLMS--RADQVVHFAAESHVDRSIAGADAFVRTNVTGTQTLLD-------- 108 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + ++ RF+ +STDEVYGS+ G F+E+ P+SPY+A+KA SD + L++ T+G+ Sbjct: 109 -AALRRGVGRFVHVSTDEVYGSVAAGRFTEEDTLGPTSPYAASKAGSDLVALSYHRTHGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP FPEK+IPL + R++ G+ V LYGDG++VR+WL+VEDH R + LV Sbjct: 168 DVRVTRCSNNYGPRQFPEKIIPLFVCRLLTGAEVPLYGDGEHVREWLHVEDHCRGVDLVR 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAI 296 GR GE YN+GG E N + L L+ K+ T + +R + DR GHDRRY+I Sbjct: 228 TGGRPGEVYNLGGGTELTNRE--------LTELLLKACGGTWDQVRHVADRKGHDRRYSI 279 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K +SE+G+ P+ + ESGL +TV WY D+ WW PL Sbjct: 280 LDVKARSELGYRPRRDFESGLAETVAWYRDHRSWWEPL 317 >gi|315502244|ref|YP_004081131.1| dtdp-glucose 4,6-dehydratase [Micromonospora sp. L5] gi|315408863|gb|ADU06980.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. L5] Length = 333 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 155/345 (44%), Positives = 213/345 (61%), Gaps = 29/345 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-----------DLKIQVLVIDKLTYAGNLNSLKEISQS 49 MR++VTGGAGFIGS R L+ + + V+DKLTY+GNL +L + Sbjct: 1 MRILVTGGAGFIGSEYVRMLLGVPGGDAAGVPVEDPAALTVLDKLTYSGNLANLAPVRDD 60 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F++ DICD + + D IV+FAAESHVDRSI GA F+TTN++GT LL+ Sbjct: 61 PRLRFVRGDICDPALVDEVVPGH--DVIVHFAAESHVDRSITGAAPFVTTNVLGTQTLLD 118 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + RF+ +STDEVYGS+D G ++ED P P+SPYSA+KA SD L L Sbjct: 119 AAL---------RHGISRFVHVSTDEVYGSIDSGSWTEDWPLAPNSPYSASKAGSDLLAL 169 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ T+G+ V+++ CSNNYGPY FPEK++PL +T +++G V LYGDG NVRDWL+V DH Sbjct: 170 SYHRTHGLDVVVTRCSNNYGPYQFPEKVVPLFVTNLLDGGTVPLYGDGGNVRDWLHVHDH 229 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 R + +V +KGR GE Y+IGG E N L + L+ + + + + DR G Sbjct: 230 CRGVAMVQEKGRAGEVYHIGGGTELTNRQ-------LTERLLAACGAGWDRVVPVTDRKG 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 HDRRY++D KI E+G+ P +++ GL +TV WY DN WW PL Sbjct: 283 HDRRYSLDIGKISGELGYAPSIDLDRGLAETVRWYRDNRAWWEPL 327 >gi|325963885|ref|YP_004241791.1| dTDP-glucose 4,6-dehydratase [Arthrobacter phenanthrenivorans Sphe3] gi|323469972|gb|ADX73657.1| dTDP-glucose 4,6-dehydratase [Arthrobacter phenanthrenivorans Sphe3] Length = 332 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 209/335 (62%), Gaps = 24/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGS Y++ + + V+DKLTYAGNL SL+ + ++ F+F+Q DI D Sbjct: 4 LLVTGGAGFIGSNFVHYVLANTDDNITVLDKLTYAGNLESLRGLPEAR-FTFVQGDIADA 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + D +V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 63 AVVDGLVA--GSDVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF ISTDEVYG L D F+E PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 KHNKRFHHISTDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGLQA 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++ DH A+ ++ K Sbjct: 171 TISNCSNNYGPYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAIIAK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+IGE Y IG + E+ N D+V E+ P +Y H + DRPGHD RYAIDS+ Sbjct: 231 GKIGETYLIGADGEKNNKDVV-ELILEHMGQAPDAYDH------VVDRPGHDLRYAIDST 283 Query: 300 KIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 K+++E+GW P+ N ++G+ T+ WY DN WWRP Sbjct: 284 KLRNELGWEPRFSNFDAGIEDTIAWYRDNEDWWRP 318 >gi|152974749|ref|YP_001374266.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023501|gb|ABS21271.1| dTDP-glucose 4,6-dehydratase [Bacillus cytotoxicus NVH 391-98] Length = 323 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 163/339 (48%), Positives = 225/339 (66%), Gaps = 18/339 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M + VTGGAGFIGS RY++ + +++ D LTY+GNL++L+ + Q + + F+Q DI Sbjct: 1 MNIFVTGGAGFIGSNFIRYILRTHQTYRIINYDLLTYSGNLDNLQSVHQDSRYFFVQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + + + + D I+NFAAESHVDRSI + F TN++GT LLE + + Sbjct: 61 QNRELAQKVILQHRIDCIINFAAESHVDRSIENSTPFFNTNVMGTVALLEIVKEY----- 115 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R LQ+STDEVYGSL +KGLF+E P PSSPYS++KAS+D + L++ TYG Sbjct: 116 ----PHIRMLQVSTDEVYGSLGNKGLFTETTPLAPSSPYSSSKASADMIALSYFKTYGTH 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY +PEKLIPL I + ++G + +YGDG+NVRDWL+VEDH RAL V+ Sbjct: 172 VSITRCSNNYGPYQYPEKLIPLMIIQALKGKQLPVYGDGKNVRDWLHVEDHCRALDAVMH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNIGGN ER NI++V +++ + I F+ DR GHDRRYAID+ Sbjct: 232 RGKAGEVYNIGGNQERTNIEVV-------RSILQQLGKSETAIEFVADRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 SKIK E+GW P E GL +T+ WY +N WW L ++ Sbjct: 285 SKIKKELGWSPTYTFEEGLRETIEWYCENELWWSRLQQK 323 >gi|254168156|ref|ZP_04875003.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] gi|197622922|gb|EDY35490.1| dTDP-glucose 4,6-dehydratase [Aciduliprofundum boonei T469] Length = 334 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 214/334 (64%), Gaps = 18/334 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS YL+N + I+++ D L+Y NL +L+++ + + F++ DI Sbjct: 3 KILVTGGAGFIGSNCIHYLLNKYEDIEIVNYDVLSYGSNLKNLRDVEKDKRYRFIKGDIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + +K I+NFAAE+HVDRSI FI TN++G LLE R Sbjct: 63 DREKLGEVIKSEGITQIINFAAETHVDRSISSPLSFINTNVLGVATLLEMAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D R + ISTDEVYG + +G F E +PSSPYSA+KAS+D +V ++ TYG+ + Sbjct: 115 -KYDIDRIVHISTDEVYGDIVEGSFREGDRLSPSSPYSASKASADLIVKSYVRTYGVDAV 173 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY FPEKLIP I R ++G + +YG G+ VRDW++VEDH R + LVL+KG Sbjct: 174 ITRCSNNYGPYQFPEKLIPKTIIRALKGLKIPIYGTGKQVRDWIFVEDHCRGIDLVLQKG 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNI N E++NI++V I L + ++I ++EDRPGHD RY++++ K Sbjct: 234 NKGEVYNIASNEEKENIEVVIRILTYLG-------KNEDMIEYVEDRPGHDVRYSLNTEK 286 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 I++ +GW P N GL V WY+ N WWW+PL Sbjct: 287 IRN-LGWKPVYNFNEGLKYVVEWYVKNEWWWKPL 319 >gi|254303438|ref|ZP_04970796.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323630|gb|EDK88880.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 400 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 156/376 (41%), Positives = 232/376 (61%), Gaps = 50/376 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ K I+V+V D LTYAGNL ++KE + + F +VDI ++ Sbjct: 6 LLTGAAGFIGANFLKYILKKYKDIKVIVADSLTYAGNLGTIKEELKDSRVKFEKVDIREK 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ T+ W +S+D+ Sbjct: 66 KEIERIFSENKVDYVVNFAAESHVDRSIENPQVFLETNILGTQNLLDNTKKSW-IISKDE 124 Query: 123 ------KDQFRFLQISTDEVYGSLDKG------------------------------LFS 146 ++ ++LQ+STDEVYGSL K F+ Sbjct: 125 NGYPVYREGVKYLQVSTDEVYGSLSKDYDEPIELVITDEGVKKVVKNRKNLKTYGNKFFT 184 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P +P SPYSA+K S+D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL I ++ Sbjct: 185 EESPADPRSPYSASKTSADHIVIAYGETYKLPINITRCSNNYGPYQFPEKLIPLMIKNIL 244 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 EG + +YG G N+RDW++VED+ + + LVL++ ++GE YNIGG NE KNI+IV + + Sbjct: 245 EGKKLPVYGKGDNIRDWIFVEDNCKGIDLVLREAKVGEIYNIGGFNEEKNINIVKLVIDI 304 Query: 267 LDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L I + + +LI +++DR GHD RYA+D SKI ++ W+ + + E Sbjct: 305 LKEEITNNNEYKKVLKTDISNINYDLITYVQDRLGHDMRYAVDPSKIAKDLEWYSETDFE 364 Query: 315 SGLNKTVCWYLDNNWW 330 +G+ KT+ WYL+N W Sbjct: 365 TGIRKTIKWYLENQDW 380 >gi|28492997|ref|NP_787158.1| dTDP-glucose 4,6-dehydratase [Tropheryma whipplei str. Twist] gi|28572207|ref|NP_788987.1| dehydratase [Tropheryma whipplei TW08/27] gi|28410338|emb|CAD66724.1| putative dehydratase [Tropheryma whipplei TW08/27] gi|28476037|gb|AAO44127.1| dTDP-glucose 4,6-dehydratase [Tropheryma whipplei str. Twist] Length = 327 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/339 (46%), Positives = 222/339 (65%), Gaps = 28/339 (8%) Query: 3 LIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 ++VTGGAGFIGS R + + V V+D LTY+GN+N+L + S+ F+ Sbjct: 4 ILVTGGAGFIGSNFVRRAIENKYPEIRDCTVTVLDALTYSGNINNLSPVRSSSRLRFIHG 63 Query: 58 DICDRECIRSALKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + L E P+ +V+FAAE+HVDRSI A F+ TN++GT LLE Sbjct: 64 DIRDEDL----LSEIMPNVNYVVHFAAETHVDRSIKNASAFVETNVLGTGRLLE------ 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + RF+ ISTDEVYGS++ G + E+ P P+SPYSA+KA+SD LV ++ TY Sbjct: 114 ---AAARNNIDRFIHISTDEVYGSIESGSWDENQPLLPNSPYSASKAASDLLVRSYHKTY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV ++ CSNNYGPY FPEK+IPL +T +IE V LYGDG NVRDWL+V+DH R +Y+ Sbjct: 171 DLPVCITRCSNNYGPYQFPEKVIPLFVTNLIEDKEVPLYGDGTNVRDWLHVDDHCRGIYI 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KGR GE YNIGG E N D + ++ ++ KS+S +++ ++DRPGHD+RY+ Sbjct: 231 VLTKGRSGEIYNIGGGLELSNAD----LSQIILEVMEKSWS---MVKRVKDRPGHDKRYS 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + +KI S +G+ P+ + E GL +T+ WY DN+ WW+PL Sbjct: 284 VSINKI-STLGYRPEVSFEQGLAETINWYKDNSSWWKPL 321 >gi|222873087|gb|EEF10218.1| predicted protein [Populus trichocarpa] Length = 270 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 148/268 (55%), Positives = 186/268 (69%), Gaps = 2/268 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ + VL +DKLTYAGNL SL+ + F+Q DI D Sbjct: 2 ILVTGGAGFIGANFVLDWLAAGDEPVLNVDKLTYAGNLKSLESLQGDARHVFVQADIGDG 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L E +P A+VNFAAESHVDRSI G ++FI TN++GTF LLE R +WS L + Sbjct: 62 EVLARLLAEHRPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRGYWSALDAEA 121 Query: 123 KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FRFL +STDEVYGSL F+ED Y P+SPYSA+KA+SD+LV AW HTYG+PVL Sbjct: 122 RTAFRFLHVSTDEVYGSLAPAAPAFTEDHLYEPNSPYSASKAASDHLVRAWHHTYGLPVL 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +NCSNNYGP HFPEKLIPL I + G + +YGDG VRDWLYV DH A+ VL+ G Sbjct: 182 TTNCSNNYGPLHFPEKLIPLMIVNALAGKPLPIYGDGMQVRDWLYVRDHCSAIRRVLEAG 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLD 268 R+G+ YN+GG NE+ N++IV + LLD Sbjct: 242 RLGDTYNVGGWNEKPNVEIVNTVCALLD 269 >gi|297563642|ref|YP_003682616.1| dTDP-glucose 4,6-dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848090|gb|ADH70110.1| dTDP-glucose 4,6-dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 330 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/348 (42%), Positives = 223/348 (64%), Gaps = 23/348 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M+++VTGGAGFIGS R ++ + +V+V+DKLTYAG SL ++ +F+ Sbjct: 1 MKILVTGGAGFIGSNFVRRVLAGVYPRFADAEVVVLDKLTYAGTTESLASVADHPRMTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D+CD + +R ++ +V+ AAE+HVDRSI A F+ TN++GTF LL+ Sbjct: 61 QGDVCDEQLVRGLMRGVS--TVVHCAAETHVDRSISDAGCFVRTNVVGTFHLLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S L++ ++ F+ +STDEVYG+L G + E P P+SPYSA+K++SD L ++ TY Sbjct: 113 SALNEGVEN---FVLVSTDEVYGTLSTGSWVETDPLEPNSPYSASKSASDLLARSFHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C+NNYGP+ FPEK+IPL +T +++G V LYGDG NVR+W++V+DH AL L Sbjct: 170 GMRVCVTRCANNYGPFQFPEKMIPLFVTNLLDGVPVPLYGDGGNVREWVHVDDHCDALAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G GE YNIGG+ ++N+++ +AL+ +IRF+ DR GHDRRY+ Sbjct: 230 AAEHGEPGEVYNIGGSVGKRNLEVT-------EALLELLGHDGSMIRFVADRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 +D SK ++ +G+ P + E GL +TV WY +N WW PL K L +D Sbjct: 283 VDGSKAETRLGYRPSVSFEEGLARTVAWYTENRAWWEPLKKRLPQQDD 330 >gi|304388884|ref|ZP_07370934.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] gi|304337177|gb|EFM03361.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] Length = 253 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 140/250 (56%), Positives = 183/250 (73%), Gaps = 2/250 (0%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNVDKLTYAGNLESLTEVAGNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R + + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRRQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ FRF ISTDEVYG L LF+E PY PSSPY+A+KASSD+LV AW TYG+P Sbjct: 123 KRETFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYAASKASSDHLVRAWQRTYGLPA 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++SNCSNNYGP FPEKLIPL I ++G + +YGDG +RDWL+VEDH RALY ++ K Sbjct: 183 IVSNCSNNYGPRQFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQLVSK 242 Query: 240 GRIGERYNIG 249 G GE YNIG Sbjct: 243 GVAGETYNIG 252 >gi|169351598|ref|ZP_02868536.1| hypothetical protein CLOSPI_02378 [Clostridium spiroforme DSM 1552] gi|169291820|gb|EDS73953.1| hypothetical protein CLOSPI_02378 [Clostridium spiroforme DSM 1552] Length = 341 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 161/337 (47%), Positives = 228/337 (67%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG Y+V + ++V +D LTYAGNL + K + + F++ DI Sbjct: 1 MKILVTGGAGFIGGNFVHYMVENHPEDMIVNLDLLTYAGNLETCKPVEGKPNYKFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ I ++ + D +VNFAAESHVDRSI + F+ TN++GT LL+ + + Sbjct: 61 ADRKFIFDLFEKEKFDIVVNFAAESHVDRSITDPEIFVKTNVMGTTTLLDAAKEFGVK-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R+ Q+STDEVYG L D+ F+E P + SSPYS++KAS+D VLA+ TY Sbjct: 119 -------RYHQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSSSKASADLFVLAYHRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G NVRDWL+V DH A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLMISRALADEELPVYGKGDNVRDWLHVYDHCVAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++ GR+GE YN+GG+NER N+++V I L+ P+S LI+F+EDR GHDRRYA Sbjct: 232 IIRNGRVGEVYNVGGHNERTNLEVVKTILKALNK--PES-----LIKFVEDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID +K+++E+GW P+ N ++G+ +T+ WYLDN WW+ Sbjct: 285 IDPTKLETELGWKPKYNFDTGIQQTIQWYLDNKEWWQ 321 >gi|297160273|gb|ADI09985.1| dTDP-glucose 4,6-dehydratase [Streptomyces bingchenggensis BCW-1] Length = 322 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 155/341 (45%), Positives = 218/341 (63%), Gaps = 25/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ D +V V+DKLTYAG+ +SL +F+ Sbjct: 1 MRILVTGGAGFIGSTYVRTLLADGYPGCAGARVTVLDKLTYAGHRDSLPATDPR--LTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD + L DA+V+FAAESHVDRS+ A +F+TTN GT ILL+ Sbjct: 59 RGDICDAALLHEVLPGH--DAVVHFAAESHVDRSLEAAADFVTTNACGTQILLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL + R + +STDEVYGS++ G ++E+ P P++PY+A+KA+SD + A T+ Sbjct: 111 ACL---RARVPRVVHVSTDEVYGSIEHGSWTEEWPLAPNTPYAASKAASDLIARACWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY PEKLIPL +T ++EG V LYGDG N+R+WL+VEDH RA++L Sbjct: 168 GLDVSITRCSNNYGPYQHPEKLIPLFVTNLLEGKEVPLYGDGSNMREWLHVEDHCRAIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YN+GG NE N + + L A ++R + DR GHD RY+ Sbjct: 228 VLNRGRAGEIYNVGGGNEYTNAALTRRLLELCGA-------DERMVRHVPDRKGHDLRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D +KI+ E+G+ P+ ++GL TV WY DN WW+ + + Sbjct: 281 LDETKIREELGYAPRVPFDTGLAATVAWYRDNPGWWKQVTR 321 >gi|296274084|ref|YP_003656715.1| dTDP-glucose 4,6-dehydratase [Arcobacter nitrofigilis DSM 7299] gi|296098258|gb|ADG94208.1| dTDP-glucose 4,6-dehydratase [Arcobacter nitrofigilis DSM 7299] Length = 335 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 159/328 (48%), Positives = 224/328 (68%), Gaps = 5/328 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TG AGFIGS Y + K L+ +D LTYAGNLN+L E +++ + F++ DIC+ Sbjct: 4 LLLTGTAGFIGSNFVPYFLEKYKEYNLINLDLLTYAGNLNNLNECNENPRYKFIKGDICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW--SCLS 119 RE + E+ +++FAAESHVD SI FI TN+ GTF L++ + +W + Sbjct: 64 RELVEFIFDEYDIRGVIHFAAESHVDNSIKNPAIFIQTNVHGTFTLVDVAKNYWMDKPFT 123 Query: 120 QDKKDQ-FRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 KK Q RF ISTDEVYG+LD+ GLF+E+ PY+P+SPYSA+KASSD ++ ++ TYG+ Sbjct: 124 YKKKYQGCRFHHISTDEVYGTLDETGLFTEETPYSPNSPYSASKASSDMIIRSYKETYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +++NCSNNYGP EKLIP I ++G+ + +YGDG+N+RDWLYV DH + + LV Sbjct: 184 NTVITNCSNNYGPKQDDEKLIPTIIRNALKGTPIPIYGDGKNIRDWLYVLDHCKGIDLVF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G+ GE YNIGG NE+ N IV I +LD +PK+ S+ +LI F+EDR GHDRRYAID Sbjct: 244 HFGKKGETYNIGGGNEKTNFQIVNTICEILDTKVPKNDSYKKLITFVEDRAGHDRRYAID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL 325 + K++ E+GW E+ ++G+ KT+ WYL Sbjct: 304 AKKLEIELGWKVDESFDNGILKTIEWYL 331 >gi|325854298|ref|ZP_08171497.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] gi|325484092|gb|EGC87026.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] Length = 384 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 162/358 (45%), Positives = 223/358 (62%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ D I+V+++D LTYAGNL ++K+ F++ DI Sbjct: 5 LVTGAAGFIGANYIKYLLHKKYLDDDIKVIILDALTYAGNLGTIKDDIDDKRCFFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + E D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRELVDRLFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D+ V+A+ Sbjct: 125 DGQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADHFVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKKLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMKNIDIVKLTIKTIHDMMEKDKSLRSILRKQVKDANGDID 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +LI + DR GHD RYAID KIK+E+GW+P+ G+ KT+ W L++ W Sbjct: 305 IDWINNDLITHVPDRLGHDARYAIDPEKIKNELGWYPETLFADGIVKTIRWNLEHQDW 362 >gi|323144766|ref|ZP_08079342.1| dTDP-glucose 4,6-dehydratase [Succinatimonas hippei YIT 12066] gi|322415463|gb|EFY06221.1| dTDP-glucose 4,6-dehydratase [Succinatimonas hippei YIT 12066] Length = 360 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 219/355 (61%), Gaps = 21/355 (5%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y L N V+V+D LTYAG +L + + F+F++ DI D Sbjct: 4 LLVTGGAGFIGSNYVFYHLTNFPADNVVVLDALTYAGCRETLDPLIDNPHFTFVKGDILD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + S +++++ D IV+FAAESHVDRSILG D FI TNI GT+ LL+ W +D Sbjct: 64 EKLVVSLIEKYKIDVIVHFAAESHVDRSILGPDAFIKTNIEGTYCLLKAAYKMWV---KD 120 Query: 122 KKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F ISTDEV+G SL FSE+ PY P+SPYSA+KASSD LV A+ HTYG+ Sbjct: 121 GVCHGHFHHISTDEVFGTLSLTDPPFSEENPYRPNSPYSASKASSDCLVRAFVHTYGLKA 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++NCSNNYGP FPEKLIPL IT ++ G V +YGDG+ +RDWL+V+DH RA+ + Sbjct: 181 TITNCSNNYGPRQFPEKLIPLVITNLLTGKEVPVYGDGKQIRDWLFVDDHCRAIDAAILS 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLD---------------ALIPKSYSHTELIRFI 284 G+ + +NIGG E N+++V + +D A K S + I + Sbjct: 241 GQSDKTWNIGGRAELTNLEVVNTVCECIDEEFKEDSSLKDRYPSAYPAKGMSCKKAIVHV 300 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 DRPGHDRRYAID K ++E+ + P + G+ T+ WYL+N+ WWR L K K Sbjct: 301 TDRPGHDRRYAIDPRKAEAELNFKPSLTFKEGIKLTLLWYLNNDKWWRELKKRTK 355 >gi|258404445|ref|YP_003197187.1| dTDP-glucose 4,6-dehydratase [Desulfohalobium retbaense DSM 5692] gi|257796672|gb|ACV67609.1| dTDP-glucose 4,6-dehydratase [Desulfohalobium retbaense DSM 5692] Length = 339 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 158/335 (47%), Positives = 214/335 (63%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGN---LNSLKEISQSNLFSFLQ 56 MR++VTGG GFIGS ++ V+V +DKLTYAGN + SL E + + + F Sbjct: 1 MRILVTGGCGFIGSNYLYHVFGTTNEDVVVNVDKLTYAGNPANIASLTEQYEGSRYFFEH 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D E ++ L+ + +A+VNFAAESHVDRSI F+TTN+ GT +LLE +R Sbjct: 61 ADIADPEAMQRILETYDIEAVVNFAAESHVDRSIDDPAPFVTTNVQGTQVLLEASR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYGSL +G F+ED P P+SPYSA+KA++D LV A+ TY Sbjct: 117 -----RHGLKRFVHVSTDEVYGSLGPEGKFTEDTPLAPNSPYSASKAAADLLVRAYVMTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P +++ CSNNYGPY FPEKLIPL + G H+ +YGDG N+RDW++V DH R + Sbjct: 172 DFPGIVTRCSNNYGPYQFPEKLIPLMYLKARAGEHLPVYGDGGNIRDWIHVADHCRGVDT 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ GR G YN GG+ E N+++V + LD P+S LIRF+ DRPGHDRRYA Sbjct: 232 ALRHGRPGAIYNFGGDAEVSNLELVKLLLRQLDR--PES-----LIRFVTDRPGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D ++ E+GW PQ N+E GL T+ WY ++ W Sbjct: 285 MDYTRTHKELGWQPQINLEHGLQATIDWYGQHDHW 319 >gi|294624387|ref|ZP_06703081.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601321|gb|EFF45364.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 287 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 143/272 (52%), Positives = 189/272 (69%), Gaps = 2/272 (0%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG V ++V+ +D LTYAGNL +L + F+ +I DR Sbjct: 5 LVTGGAGFIGGNFVLEAVA-AGVRVITLDALTYAGNLATLTSLRDHPGHVFVHGNIGDRA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E +PDA++NFAAE+HVDRSI G F+ TN++GT LL+ W LS ++ Sbjct: 64 LVSRVLEEHRPDAVLNFAAETHVDRSIDGPAAFVQTNVVGTLGLLQSVLDHWRTLSPGQR 123 Query: 124 DQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 FR L +STDEVYGSL + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL + Sbjct: 124 KAFRLLHVSTDEVYGSLGENGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTT 183 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGPYHFPEKLIPL I + + + +YGDG+ VRDWL+V DH A+ VL+KGR+ Sbjct: 184 NCSNNYGPYHFPEKLIPLVIAKALASEPLPIYGDGKQVRDWLFVSDHCDAIRTVLEKGRV 243 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 GE YN+GGN ER+NI++V I LLD L P++ Sbjct: 244 GETYNVGGNAERQNIEVVHTICTLLDQLRPRA 275 >gi|229056955|ref|ZP_04196350.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH603] gi|228720344|gb|EEL71918.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH603] Length = 323 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 165/336 (49%), Positives = 221/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + + +++ D LTY+GNLN++K I ++ +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLKNYETYKIINYDALTYSGNLNNVKSIQENPNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVVKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F E+ P P+SPYS++KASSD + L++ TY +P Sbjct: 114 --KYSYIKLVQVSTDEVYGSLGKTGKFIEETPLAPNSPYSSSKASSDMIALSYYETYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ VL Sbjct: 172 VIITRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDTVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGCVGEVYNIGGNNEKTNVDVVEQIIKLLGKT-------KKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY +N WW+PL Sbjct: 285 QKMKNEFEWEPRYTFEQGLKETVEWYKNNVDWWKPL 320 >gi|297625252|ref|YP_003687015.1| DTDP-glucose 4,6-dehydratase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921017|emb|CBL55555.1| DTDP-glucose 4,6-dehydratase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 332 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 212/336 (63%), Gaps = 24/336 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAGFIGS ++++ V+V+DKLTYAGN+ SL+ + ++ +SF++ D+CD Sbjct: 3 RLLVTGGAGFIGSNFVHHVLDHTDDTVVVLDKLTYAGNMGSLEGLP-ADRYSFVKGDVCD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + + + DA+V+FAAESH D S+L F+ TN++GTF LLE R Sbjct: 62 RELVDKLVAD--ADAVVHFAAESHNDNSLLDPAPFVQTNLVGTFSLLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R+ ISTDEVYG L D F + YNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 -AHDVRYHHISTDEVYGDLALDDPAKFEPETAYNPSSPYSSTKAGSDLLVRAWVRSFGVR 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP EKLIP IT +I+G LYGDG NVRDW++V+DH A+ +L Sbjct: 170 ATISNCSNNYGPRQHVEKLIPRQITNIIDGVRPRLYGDGLNVRDWIHVDDHNAAVLTILD 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR GE Y IG + E N ++ +I + +Y H + DRPGHDRRYAIDS Sbjct: 230 KGRYGETYLIGADGELNNKTVIEKI-LVAMGQPADAYDH------VTDRPGHDRRYAIDS 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +++++E+GW P + ++GL T+ WY N WWRP Sbjct: 283 TRLRTELGWQPHYRDFDAGLAHTIDWYRANESWWRP 318 >gi|226363371|ref|YP_002781153.1| dTDP-glucose 4,6-dehydratase [Rhodococcus opacus B4] gi|226241860|dbj|BAH52208.1| dTDP-glucose 4,6-dehydratase [Rhodococcus opacus B4] Length = 334 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 161/338 (47%), Positives = 208/338 (61%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + +QV V+D LTYAGN SL ++ + F+ D+ Sbjct: 1 MRLLVTGGAGFIGANFVHQTVAERPDVQVTVLDALTYAGNRRSLDAVA--DRIEFVHGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + DA+V+FAAESH D S+ F+ TN+IGTF LL+ R Sbjct: 59 ADFALVDRLVA--ASDAVVHFAAESHNDNSLADPTPFVQTNVIGTFSLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ ISTDEVYG L D F+E PYNPSSPYSATKASSD LV AW ++G Sbjct: 110 ---AHDVRYHHISTDEVYGDLELDDPERFTESTPYNPSSPYSATKASSDLLVRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V+DH A++ + Sbjct: 167 VRATLSNCSNNYGPYQHVEKFIPRQITNLIDGVRPRLYGSGKNVRDWIHVDDHNAAVWTI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG +G+ Y IG + E N +V G LL+ T + F+ DRPGHD RYAI Sbjct: 227 LEKGTLGQTYLIGADGEVDNRTVV---GTLLEVF----GRDTNDLDFVTDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DS+++++E+GW PQ E+ SGL TV WY DN WWRP Sbjct: 280 DSTRLRTELGWTPQYEDFRSGLEATVRWYRDNESWWRP 317 >gi|119026513|ref|YP_910358.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium adolescentis ATCC 15703] gi|118766097|dbj|BAF40276.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 340 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 163/338 (48%), Positives = 212/338 (62%), Gaps = 29/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + V V+DKLTYAGN ++ + QS + + DICD Sbjct: 11 ILVTGGCGFIGANFVRYVARNHPDVHVTVLDKLTYAGNPANIDGLPQSQV-ELVIGDICD 69 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 S L+ P DAIV+FAAESH D SI + FI TN+ GT LLE +C Sbjct: 70 A----SLLERIVPGCDAIVHFAAESHNDNSIFDPEPFIRTNVEGTMRLLEA-----AC-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF ISTDEVYG L D F E+ PY PSSPYSA+KA+SD+LV AW TYG Sbjct: 119 ---KYDVRFHHISTDEVYGDLALDDPARFGENSPYRPSSPYSASKAASDHLVRAWTRTYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH A++ + Sbjct: 176 LRATISNCSNNYGPYQHVEKFIPRQITSILEGARPKLYGTGENVRDWIHTEDHSSAVWEI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIGE Y IG + E NI ++ I L+ + + ++ DRPGHDRRYAI Sbjct: 236 LTRGRIGETYLIGADGEMSNIAVMRMILRLMGCV-------EDAFDWVRDRPGHDRRYAI 288 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 DSSK+++E+GW P + + E+GL T+ WY+DN WW P Sbjct: 289 DSSKLRTELGWKPVRTDFEAGLQATIAWYIDNRAWWEP 326 >gi|295856704|gb|ADG46993.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum] Length = 340 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 213/336 (63%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL ++K I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIKGI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPNKFTEETPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILEGLRPKLYGNGENVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG N ER NI ++ +I ++ P ++ +++DRPGHDRRYAIDS Sbjct: 238 KGRLGETYLIGANGERNNITVLRDILTVM-GQDPDAFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLRTELGWKPTHTDFQKGLEQTIKWYTDNRDWWEP 326 >gi|254387650|ref|ZP_05002888.1| NDP-glucose-4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294817905|ref|ZP_06776547.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|326446968|ref|ZP_08221702.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|197701375|gb|EDY47187.1| NDP-glucose-4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294322720|gb|EFG04855.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] Length = 324 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 153/337 (45%), Positives = 214/337 (63%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ +V V+D LTYAG +++ S F+ Sbjct: 1 MRLLVTGGAGFIGSHYVRTLLGPGYPGCADARVTVLDALTYAGRRDNVP--SAHPRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CDR +R L DA+++FAAESHVDRS+ AD F+ TNI GT LL R Sbjct: 59 EGDVCDRRLLRELLPGH--DAVIHFAAESHVDRSLRSADPFVRTNIGGTQTLLSACR--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R + +STDEVYGS+++G ++ED P P+SPY+A+KA +D L A+ + Sbjct: 114 ------DAGVERVVHVSTDEVYGSIERGSWTEDSPLLPNSPYAASKAGADLLARAYHQAF 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C+NNYGPY PEKLIPL IT ++EG + LYGDG+N+RDW++V+DH RA++L Sbjct: 168 GMDVSITRCANNYGPYQHPEKLIPLFITHLMEGLDLPLYGDGRNIRDWVHVDDHCRAVHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +G GE YNIGG ER NI++ E+ L A + +R++ DR GHDRRY+ Sbjct: 228 VLTQGGAGEVYNIGGGGERSNIEVTEELLRLCGADRSR-------VRYVADRAGHDRRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D S+I+ +G+ P+ SGL +TV WY D+ WW+ Sbjct: 281 LDDSRIRERLGYAPRVGFASGLAETVAWYHDHADWWK 317 >gi|225352523|ref|ZP_03743546.1| hypothetical protein BIFPSEUDO_04146 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156717|gb|EEG70111.1| hypothetical protein BIFPSEUDO_04146 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 340 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 210/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+V N + V V+D LTYAGN+ ++ + + + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVDNHPDVHVTVLDALTYAGNIENIAGLPEDRV-EFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R + Sbjct: 70 AELLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLKTNVEGTFRLLEAVRRY------- 120 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYGI Sbjct: 121 ---GIRYHHVSTDEVYGDLALDDPAKFTERTPYHPSSPYSSTKAASDMLVRAWTRTYGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG N E+ NI ++ I ++ P+ + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGANGEKNNITVLRMILKMMGQ--PE-----DAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + ESGL T+ WY DN WW P Sbjct: 291 TKLRTELGWTPTHTDFESGLKTTIDWYTDNRQWWEP 326 >gi|229166161|ref|ZP_04293921.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH621] gi|228617259|gb|EEK74324.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH621] Length = 323 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 164/336 (48%), Positives = 221/336 (65%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + + +++ D LTY+GNLN++K I ++ +SF++ I Sbjct: 1 MNILVTGGAGFIGSNFIHYMLKNYETYKIINYDALTYSGNLNNVKSIQENPNYSFVKGKI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHVVKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVRLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F E+ P P+SPYS++KASSD + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKTGKFIEETPLAPNSPYSSSKASSDMIALSYYETYQLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ VL Sbjct: 172 VIITRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDTVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G+ YNIGGNNE+ N+D+V +I LL + I F+ DR GHDRRYAID+ Sbjct: 232 KGCVGDVYNIGGNNEKTNVDVVEQIIKLLGKT-------KKDIEFVTDRLGHDRRYAIDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+K+E W P+ E GL +TV WY +N WW+PL Sbjct: 285 QKMKNEFEWEPKYTFEQGLKETVEWYKNNVDWWKPL 320 >gi|227872030|ref|ZP_03990411.1| dTDP-glucose 4,6-dehydratase [Oribacterium sinus F0268] gi|227842122|gb|EEJ52371.1| dTDP-glucose 4,6-dehydratase [Oribacterium sinus F0268] Length = 338 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 221/336 (65%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQV-LVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+ IVTGGAGFIG ++VN + + +D LTYAGNL +L + + F++ DI Sbjct: 1 MKTIVTGGAGFIGGNFMHFVVNAYPDEEWICLDSLTYAGNLETLAPLEGKKNYRFIKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR I + +PD ++NFAAESHVDRS+ + F+ TN++GT L++ +C Sbjct: 61 TDRAFIFDLFAKEKPDVVINFAAESHVDRSLKDPEIFLKTNVLGTVCLMD------ACRE 114 Query: 120 QDKKDQFRFLQISTDEVYGSL----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L F+ED P SSPYS++K S+D VLA+ T+ Sbjct: 115 YGIK---RYHQVSTDEVYGDLPLERTDLFFTEDTPIKTSSPYSSSKGSADLFVLAYHRTF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPYHFPEKLIPL I+R + + +YG G+NVRDWLYV DH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYHFPEKLIPLVISRALNNESIPVYGKGENVRDWLYVTDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++KGR+GE YN+GG+NER N+++V I LD P+S LI ++ DRPGHD RYA Sbjct: 232 IVRKGRVGEVYNVGGHNERTNLEVVKTILRALDK--PES-----LIHYVTDRPGHDMRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +K+++E+GW P+ ++G+ T+ WYLD+ WW Sbjct: 285 IDPTKLETELGWKPEYTFDTGIPVTIQWYLDHKDWW 320 >gi|312133746|ref|YP_004001085.1| rfbb [Bifidobacterium longum subsp. longum BBMN68] gi|311773024|gb|ADQ02512.1| RfbB [Bifidobacterium longum subsp. longum BBMN68] Length = 343 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 212/336 (63%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N + V V+D LTYAGNL ++K I + F+ +ICD Sbjct: 14 IIVTGGCGFIGSNFVHYVYSNHPDVHVTVLDALTYAGNLENIKSI-LGDRVEFVHGNICD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 73 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 121 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 122 -KYDVRYHHVSTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKASSDLLVRAWHRTFGIR 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 181 ATISNCSNNYGPYQHVEKFIPRQITNILEGLKPKLYGNGENVRDWIHTDDHSTGVWTILT 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG N ER NI ++ +I ++ P ++ +++DRPGHDRRYAIDS Sbjct: 241 KGRLGETYLIGANGERNNITVLRDILTVM-GQDPDAFD------WVKDRPGHDRRYAIDS 293 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 294 TKLQTELGWKPTHTDFQKGLEQTIKWYTDNRDWWEP 329 >gi|331701026|ref|YP_004397985.1| dTDP-glucose 4,6-dehydratase [Lactobacillus buchneri NRRL B-30929] gi|329128369|gb|AEB72922.1| dTDP-glucose 4,6-dehydratase [Lactobacillus buchneri NRRL B-30929] Length = 327 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 221/337 (65%), Gaps = 20/337 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS YL+ N QV D LTYAGNL SL ++ + F+Q +I Sbjct: 1 MKILVTGGAGFIGSNFIHYLLENHPTDQVTNFDALTYAGNLASLADVQNDPRYHFVQGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + +Q D++VNFAAESHVDRSIL D F+ +N +G LL+ + Sbjct: 61 SDRQAVEQVISTYQIDSVVNFAAESHVDRSILHPDAFVRSNFVGVSTLLDVVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ +F+QISTDEVYGS +G F+E NPSSPYSATKA +D L L++ TYGI Sbjct: 114 --QQHVNKFVQISTDEVYGS-SRGHEQFNEAAHLNPSSPYSATKAGADLLALSYYKTYGI 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ +NNYGP+ FPEKLIPL +T + G + +YG+G+NVRDWL+V D+ RA+ VL Sbjct: 171 NVSITRSANNYGPFQFPEKLIPLMVTNGLRGKSLPVYGNGKNVRDWLHVFDNCRAIDAVL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GR G YNI +N +NI IV +I L+ +P+S +I ++ DRP +D+RY+ID Sbjct: 231 RHGRPGGTYNIAAHNYAENIQIVEKIVKQLE--LPQS-----MIDYVSDRPANDQRYSID 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + I++E+GW P + + G+++TV WY+ + WWRPL Sbjct: 284 DALIRNELGWQPTIDFDQGISQTVDWYVTHEKWWRPL 320 >gi|228469686|ref|ZP_04054654.1| dTDP-glucose 4,6-dehydratase [Porphyromonas uenonis 60-3] gi|228308705|gb|EEK17431.1| dTDP-glucose 4,6-dehydratase [Porphyromonas uenonis 60-3] Length = 386 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 162/369 (43%), Positives = 213/369 (57%), Gaps = 31/369 (8%) Query: 5 VTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTG AGFIG+ L YL L ++++IDKLTYAGN S++ + + F+Q DICD Sbjct: 15 VTGAAGFIGTNLAYYLSEALAPDERIVLIDKLTYAGNYRSIEPLIDNERIVFVQADICDA 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + + P ++N AAESHVDRSI F+ TNI+G LL+ R WS S Sbjct: 75 EAMDALFTRYAPHYLINLAAESHVDRSIEDPAIFVRTNILGVQTLLDTIRNHWSTTSGRG 134 Query: 123 -----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ LQ+STDEVYGSL + G F E P +P SPYSA KAS+D L A HT+ Sbjct: 135 SYPVWQEGRMMLQVSTDEVYGSLGREGFFVESTPLDPRSPYSAAKASADLLCQAAVHTHH 194 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+ + CSNNYGPY FPEKLIPL I + + G + +YG G+NVRDWLYV DH RAL+LV Sbjct: 195 APVVWTRCSNNYGPYQFPEKLIPLVIRQCLLGKEIPIYGTGENVRDWLYVTDHCRALHLV 254 Query: 237 LKKGRIGERYNIGGNNERKNIDIVF------------------EIGFLLDALIPKSYSHT 278 + +G+ G YNIGG+NE N++IV I +L A + + Sbjct: 255 VTQGKAGTAYNIGGHNEHTNLEIVRIIISQLHDRLSKEPARAERISEILGAQVQPELINE 314 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 ELI F+ DR GHD RY ID + I E+GW P G+ T+ WYLD+ W + + Sbjct: 315 ELITFVRDRLGHDARYGIDPTFIHQELGWLPSVPFAEGIGYTIDWYLDHFDWVKSI---- 370 Query: 339 KPDNDYSKW 347 D DY + Sbjct: 371 -TDEDYQHY 378 >gi|282878518|ref|ZP_06287299.1| dTDP-glucose 4,6-dehydratase [Prevotella buccalis ATCC 35310] gi|281299309|gb|EFA91697.1| dTDP-glucose 4,6-dehydratase [Prevotella buccalis ATCC 35310] Length = 382 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 160/358 (44%), Positives = 221/358 (61%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++K + F++ DI Sbjct: 5 LVTGAAGFIGANFIKYLLDKKYKNEDIKVIILDALTYAGNLGTIKNNIDNKRCFFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR E D +VNFAAESHVDRSI F++ NI+GT L++ R W Sbjct: 65 RDRALADKLFAEHDIDFVVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G FSE P P SPYSA+K S+D +V+A+ Sbjct: 125 DAQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFSEQTPLCPHSPYSASKTSADMIVMAYRD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G NVRDWLYVEDH +A+ Sbjct: 185 TYRMPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKQLPVYGKGDNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++G+ GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGKEGEVYNVGGHNEMKNIDIVKLTIKTIHDMMQQDKDLRKVLKKQEVDEQGNIK 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F+ DR GHD+RYAID +KIK+++GW+P+ G+ KT+ W L + W Sbjct: 305 IDWINDNLITFVADRLGHDQRYAIDPTKIKNDLGWYPETMFADGIVKTIKWNLQHQDW 362 >gi|258648083|ref|ZP_05735552.1| dTDP-glucose 4,6-dehydratase [Prevotella tannerae ATCC 51259] gi|260851946|gb|EEX71815.1| dTDP-glucose 4,6-dehydratase [Prevotella tannerae ATCC 51259] Length = 372 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 156/348 (44%), Positives = 220/348 (63%), Gaps = 21/348 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +Y++ ++V+ +D LTYAG L ++ + F++ DI DR Sbjct: 5 LVTGAAGFIGANYLKYILKKYDDVRVVALDLLTYAGYLGTIADDIDEKRCFFVRGDIGDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ D +VNFAAESHVDRSI F+ TNI+GT LL+ R W ++ Sbjct: 65 KLVDDLFAKYHFDVVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDCARRDWVTGKDEQ 124 Query: 123 -----KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF Q+STDEVYGSL D G F+ED P P SPYSA+K S+D +V A+ TY Sbjct: 125 GYPTWKTGVRFHQVSTDEVYGSLGDTGFFTEDTPLQPHSPYSASKTSADLVVCAYRDTYR 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY FPEKLIPL I +++G + +YG G N+RDWLYVEDH +A+ LV Sbjct: 185 MPVSITRCSNNYGPYQFPEKLIPLVINNILQGKPLPIYGKGLNIRDWLYVEDHCKAIDLV 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR-------------- 282 + K G YN+GG+NER+NI IV I + ++ ++ S+ +L+R Sbjct: 245 VNKAADGSIYNVGGHNERQNIQIVKTILQTVRRIMEENESYRQLLRGEQGVEGIDERMIT 304 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 F++DR GHD+RY ID SKIK ++GW+P+ E G+ KTV W L+++ W Sbjct: 305 FVKDRLGHDQRYGIDPSKIKVDLGWYPETTFEVGIEKTVRWNLEHHDW 352 >gi|307748039|gb|ADN91309.1| dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni M1] Length = 343 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 220/339 (64%), Gaps = 13/339 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA N+++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPNAKIINLDFLTYASNISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD+F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 121 FLKKDKFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNSPYSASKASADMLVRSYHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ ++SNCSNNYGP+ EKLIP I + + + +YGDG+N+RDWLYV+DH A+ Sbjct: 181 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNNTQIPIYGDGKNIRDWLYVKDHCVAIES 240 Query: 236 VLKKG--RIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + K +I E +NIG N E +NIDI +I LD ++PK+ S+ E I F++DR Sbjct: 241 IYKYAFEKIKENNSFFDVFNIGANEEWQNIDIANKICSYLDNVLPKNTSYKEQITFVKDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 GHDRRYAIDS+K++ I W QEN SGL KT+ WY++ Sbjct: 301 TGHDRRYAIDSTKLQKTIDWKAQENFNSGLEKTIKWYIE 339 >gi|212715413|ref|ZP_03323541.1| hypothetical protein BIFCAT_00308 [Bifidobacterium catenulatum DSM 16992] gi|212661659|gb|EEB22234.1| hypothetical protein BIFCAT_00308 [Bifidobacterium catenulatum DSM 16992] Length = 351 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 205/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIG+ RY+ N + + V+DKLTYAGN ++ + QS + +Q DICD Sbjct: 22 IIVTGGCGFIGANFVRYVAHNHPDVHITVLDKLTYAGNPQNIAGLPQSQV-ELVQGDICD 80 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D+IV+FAAESH D SI + FITTN+ GTF LLE R Sbjct: 81 AVLLERIVSGH--DSIVHFAAESHNDNSIANPEPFITTNVEGTFHLLEAAR--------- 129 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+E PY PSSPYSA+KA+SD LV AW TYG+ Sbjct: 130 -KHDVRFHHISTDEVYGDLALDDPCKFTESTPYKPSSPYSASKAASDQLVRAWVRTYGLR 188 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH A++ +L Sbjct: 189 ATISNCSNNYGPYQHVEKFIPRQITSIMEGVRPKLYGTGENVRDWIHTEDHSSAVWEILT 248 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ + ++ DRPGHDRRYAIDS Sbjct: 249 RGRIGETYLIGADGEMSNIAVMRMILRLMGCA-------EDAFDWVRDRPGHDRRYAIDS 301 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+ W P + E+GL T+ WY N WW P Sbjct: 302 SKLRTELEWKPVHTDFEAGLQATIAWYAANRAWWEP 337 >gi|332703268|ref|ZP_08423356.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] gi|332553417|gb|EGJ50461.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] Length = 340 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 213/335 (63%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN---LFSFLQV 57 MRL++TGG GFIGS + ++N+ V+ +DKLTYAGN +L ++ + + + F+ Sbjct: 1 MRLLITGGCGFIGSNYVQQVLNETDDVVVNLDKLTYAGNRLNLAQVEERHGGRRYHFVHG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E ++ E + +A+VNFAAE+HVDRSI + F+ TNI+G LLE R Sbjct: 61 DIGDAELVQRVFDEKRIEAVVNFAAETHVDRSIHDSAPFLNTNIMGAHNLLECAR----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF+ +STDEVYGSL+ FSE+ P P+SPYSA+KAS+D L A+ HTY Sbjct: 116 ----KAGIERFVHVSTDEVYGSLEPNDPAFSEETPLAPNSPYSASKASADLLCRAYFHTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G PV+++ CSNNYGPY FPEKLIPL + + +YGDG+NVRDW+YV DH R + L Sbjct: 172 GYPVVVTRCSNNYGPYQFPEKLIPLMYLKASRDEPLPVYGDGRNVRDWIYVGDHCRGVDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+KGR G YN GG ER NID+V A++ +LIR+++DRPGHD+RYA Sbjct: 232 ALRKGRPGAVYNFGGAAERANIDVV-------KAMLNILGKGEDLIRYVKDRPGHDKRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D S E+G+ P + E GL +TV WY +N W Sbjct: 285 MDFSLAARELGFAPSLDFEEGLARTVRWYENNAQW 319 >gi|80279141|gb|ABB52526.1| dTDP-glucose-4,6-dehydratase [Streptomyces sp. KCTC 0041BP] Length = 320 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 155/342 (45%), Positives = 210/342 (61%), Gaps = 27/342 (7%) Query: 4 IVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +VTG AGFIGS R L++ VL +DKLTYAGN +L E++ +FL D Sbjct: 1 MVTGAAGFIGSHFVRQLLSGSYPELADAHVLSLDKLTYAGNTENLAEVAGHPRHTFLHGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICDR + AL+ D +V+FAAESHVDRSI + FITTN++GT LL Sbjct: 61 ICDRSTVTQALRGI--DLVVHFAAESHVDRSITDSAAFITTNVLGTHTLLR--------- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S + RF+ +STDEVYGS+ +G +E P +P+SPY+A+KASSD L LA+ T+G+ Sbjct: 110 SALEAGVSRFVHVSTDEVYGSIPEGSSAETDPLDPNSPYAASKASSDLLALAFHRTHGLD 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+ PEK++PL +T ++EG + LYGDG + RDWL+V+DH R + +V Sbjct: 170 VRVTRCSNNYGPHQHPEKVVPLFVTHLLEGLRLPLYGDGLHRRDWLHVDDHCRGIAMVAG 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR GE YNIGG E N+D+ + + A ++ + DR HDRRY +D+ Sbjct: 230 RGRAGEVYNIGGGTELSNVDLTRRLLGVFGA-------DWSVVDRVPDRAAHDRRYCVDT 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 KI E+GW P+ E GL +TV WY DN WW K LKP Sbjct: 283 RKITEELGWAPRVAFERGLAETVDWYRDNGTWW----KALKP 320 >gi|302556044|ref|ZP_07308386.1| dTDP-glucose 4,6-dehydratase [Streptomyces viridochromogenes DSM 40736] gi|302473662|gb|EFL36755.1| dTDP-glucose 4,6-dehydratase [Streptomyces viridochromogenes DSM 40736] Length = 326 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 157/341 (46%), Positives = 219/341 (64%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M L+VTG AGFIGS R L+ ++ V+DKLTYAG L++L E+ L F+Q Sbjct: 1 MNLLVTGAAGFIGSRYVRALLASDAPDAPRITVLDKLTYAGTLDNL-ELGHPRL-EFVQG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + + + D +V+ AAESHVDRSI GA +F+ TN++GT LL+ Sbjct: 59 DICDAELVDKLVAD--ADQVVHLAAESHVDRSITGAADFVRTNVLGTQTLLDAAL----- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F+ +STDEVYGS++ G + ED P P+SPYSA+KASSD L LA+ T+G+ Sbjct: 112 ----RHGTGPFVHVSTDEVYGSIESGSWPEDHPLQPNSPYSASKASSDLLALAYHRTHGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP+ FPEK+IPL +T +++G V LYG+G+NVRDWL+V+DH + + LV Sbjct: 168 DVRVTRCSNNYGPHQFPEKVIPLFVTNLLDGHKVPLYGEGRNVRDWLHVDDHCQGIDLVR 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR GE YNIGG E N ++ G LL+A + + + ++EDR GHD RY++D Sbjct: 228 TKGRPGEVYNIGGGTELTNKELT---GLLLEA----CGADWDRVEYVEDRKGHDLRYSVD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 SK + E+G+ P+ + +GL TV WY DN WW PL + + Sbjct: 281 WSKARDELGYRPRHDFGAGLADTVAWYRDNRAWWEPLKRRV 321 >gi|148272190|ref|YP_001221751.1| putative dTDP-glucose 4,6-dehydratase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830120|emb|CAN01049.1| putative dTDP-glucose 4,6-dehydratase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 329 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 162/341 (47%), Positives = 220/341 (64%), Gaps = 27/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R+ + D V+V+D LTY+GN +L +S S ++F+ Sbjct: 1 MRILVTGGAGFIGSNFVRHALQDHYAGLEGADVVVLDALTYSGNPENLAPVSDSPRYTFV 60 Query: 56 QVDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DI D + L E+ P DA+V+FAAESHVDRS+ A F+ TN++GT LL+ Sbjct: 61 HGDIRDD----AVLDEWIPQVDAVVHFAAESHVDRSVRDASIFVETNVLGTQKLLD---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + L D K RF+ +STDEVYGS+ +G + E+ P P+SPYSA+KA SD L ++ Sbjct: 113 --AALRHDLK---RFVHVSTDEVYGSIAEGSWDEERPLEPNSPYSASKAGSDLLARSYHR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+ V ++ CSNNYGPYHFPEK+IPL +T +I+ HV LYG+G N+RDWL+V+DH R + Sbjct: 168 THGLNVSITRCSNNYGPYHFPEKVIPLFVTNLIDDRHVPLYGEGLNIRDWLHVDDHCRGI 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LVL +G GE YNIGG E N ++ LLDA + +S+ + +EDR GHD R Sbjct: 228 ALVLVQGAPGEIYNIGGGTELTNRELT---QLLLDA-TGRDWSYVDR---VEDRKGHDLR 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 Y++D SKI+ E+G+ PQ E GL V WY DN WW PL Sbjct: 281 YSVDISKIQRELGYSPQVPFEQGLADVVQWYRDNRSWWEPL 321 >gi|159232400|emb|CAM96584.1| probable NDP-glucose-4,6-dehydratase [Streptomyces ambofaciens] Length = 345 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 212/340 (62%), Gaps = 23/340 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 R++VTGGAGFIGS L++ K +V V+D LTYAGNL +L + Sbjct: 22 RILVTGGAGFIGSRFVNALLDGSLPEFGKPEVRVLDALTYAGNLANLAPVGDCPRLRIFP 81 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR + A+ D +V+FAAESHVDRSI AD F+ TN++GT +LL+E Sbjct: 82 GDIRDRGAVTQAMAGV--DLVVHFAAESHVDRSIDDADAFVRTNVLGTQVLLQEALAVRP 139 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L F+ +STDEVYGS+++G + E+ P NP+SPY+A+KASSD L LA T+G Sbjct: 140 GL---------FVHVSTDEVYGSIEEGSWPEEHPLNPNSPYAASKASSDLLALAHHRTHG 190 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ CSNNYGPY +PEK+IPL + +++G V LYGDG N RDWL+V+DH R + LV Sbjct: 191 LPVCVTRCSNNYGPYQYPEKIIPLFTSSLLDGGTVPLYGDGGNRRDWLHVDDHCRGIALV 250 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GR GE YNIGG E N++ L + L+ + +R + DR GHDRRY++ Sbjct: 251 ARGGRPGEVYNIGGGTELSNVE-------LTERLLKLCGADWSAVRRVPDRKGHDRRYSV 303 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 D +KI E+G+ P+ ++ GL +TV WY +N WW P + Sbjct: 304 DYTKIADELGYAPRITIDEGLERTVHWYRENRAWWAPAKR 343 >gi|282859482|ref|ZP_06268587.1| dTDP-glucose 4,6-dehydratase [Prevotella bivia JCVIHMP010] gi|282587710|gb|EFB92910.1| dTDP-glucose 4,6-dehydratase [Prevotella bivia JCVIHMP010] Length = 384 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 159/358 (44%), Positives = 222/358 (62%), Gaps = 31/358 (8%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL+N + I+V+V+D LTYAGNL ++K + F++ DI Sbjct: 5 LVTGAAGFIGANFIKYLLNKKYQNEDIKVIVLDALTYAGNLGTIKADIDNKRCFFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E D +VNFAAESHVDRSI F++ NI+GT L++ + W Sbjct: 65 RDAQLLDKLFAEHDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQCLMDAAKRAWVTGK 124 Query: 120 QDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D+ V+A+ Sbjct: 125 DAQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEATPLCPHSPYSASKTSADHFVMAYKD 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+ +PV ++ CSNNYGPYHFPEKLIPL I +++G + +YG+G NVRDWLYVEDH +A+ Sbjct: 185 TFHMPVSITRCSNNYGPYHFPEKLIPLIINNILKGKSLPVYGEGLNVRDWLYVEDHCKAI 244 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------IP 272 +V+++GR GE YN+GG+NE KNIDIV I + D + I Sbjct: 245 DMVVREGREGEVYNVGGHNEMKNIDIVKLTIKTIHDMMEADKSLRKILKKQEKDANGDIT 304 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI + DR GHD RYAID +KIK+E+GW+P+ G+ KT+ W L+N W Sbjct: 305 IDWINNALITHVPDRLGHDARYAIDPTKIKNELGWYPETMFAEGIVKTIKWNLENQQW 362 >gi|319957461|ref|YP_004168724.1| dtdp-glucose 4,6-dehydratase [Nitratifractor salsuginis DSM 16511] gi|319419865|gb|ADV46975.1| dTDP-glucose 4,6-dehydratase [Nitratifractor salsuginis DSM 16511] Length = 358 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 155/343 (45%), Positives = 217/343 (63%), Gaps = 19/343 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIGS Y + ++ +D LTYAG+L++LKEI + F++ DIC+ Sbjct: 9 ILVTGCAGFIGSNFVPYFLEKYDNYNIVNLDLLTYAGDLDNLKEIGNHPRYKFIKGDICN 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 R+ + E+ +++FAAESHVD SI F+ TN+ GTF LL+ W + Sbjct: 69 RKLVEFIFDEYDIKGVIHFAAESHVDNSIKNPGVFVETNVNGTFTLLDVAYKHWMKSPFV 128 Query: 119 SQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + K + RF ISTDEVYGSL LF+E+ PY P+SPYSA+KA+SD +V ++ TY Sbjct: 129 FKVKYEGCRFHHISTDEVYGSLGDDSNDLFTEETPYAPNSPYSASKAASDMIVRSYVKTY 188 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++NCSNNYGP EKLIP I + + G V +YGDG+N+RDWLYV DH + + L Sbjct: 189 GMNCVITNCSNNYGPKQHDEKLIPTIIRKALAGEPVPIYGDGKNIRDWLYVLDHCKGIDL 248 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------YSHTELIRF 283 V KG+ GE YNIGG NER N+ I + I LD + P ++ +L+ F Sbjct: 249 VYHKGKSGETYNIGGRNERTNLQIAYTICKRLDEIYPVKDNPSISDPRSTIQNYKDLLVF 308 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +EDR GHDRRYAID++KI+SE+GW EN ++G+ KT+ WYL+ Sbjct: 309 VEDRAGHDRRYAIDATKIESELGWRADENFDTGIIKTIDWYLE 351 >gi|239983208|ref|ZP_04705732.1| dehydratase [Streptomyces albus J1074] gi|291455038|ref|ZP_06594428.1| AprE [Streptomyces albus J1074] gi|291357987|gb|EFE84889.1| AprE [Streptomyces albus J1074] Length = 331 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 212/341 (62%), Gaps = 21/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M ++VTGGAGFIGS R L++ + + V+DKL+YAGN +L E F F + Sbjct: 1 MHVLVTGGAGFIGSHYVRMLLSRPGSRGLTITVLDKLSYAGNPANLAEWEADERFRFRRG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICDR + L D +V+FAAESHVDRSI D F+ TN++GT LLE + Sbjct: 61 DICDRALLDEVLP--GADCVVHFAAESHVDRSIEDGDVFLRTNVLGTQRLLEASL----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +F+ +STDEVYGS+D+G + E P P+SPYSA+KASSD LVLA+ T+G+ Sbjct: 114 ----RHGVGKFVHVSTDEVYGSIDQGSWPETDPLRPNSPYSASKASSDLLVLAFHRTHGL 169 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP +PEK++PL +TR+I+G V LYGDG+ VRDWL+VEDH + LV Sbjct: 170 DVSVTRCSNNYGPMQYPEKVVPLFLTRLIDGLPVPLYGDGRQVRDWLHVEDHCHGIELVC 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 GR GE YN+GG E N D L + L+ + S +R + DR GHD RY++D Sbjct: 230 SGGRPGEVYNLGGGTELSNRD-------LTERLLAVTGSDWSSVRRVPDRKGHDLRYSVD 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 SK + E+G+ P + SGL T WY D+ WWRPL + L Sbjct: 283 WSKAREELGYLPTRDFASGLEATARWYRDHPGWWRPLGRRL 323 >gi|29827487|ref|NP_822121.1| dTDP-glucose 4,6-dehydratase [Streptomyces avermitilis MA-4680] gi|5921157|dbj|BAA84593.1| dTDP-glucose 4,6-dehydratase [Streptomyces avermitilis] gi|29604587|dbj|BAC68656.1| dTDP-glucose 4,6-dehydratase [Streptomyces avermitilis MA-4680] Length = 355 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 160/358 (44%), Positives = 223/358 (62%), Gaps = 25/358 (6%) Query: 5 VTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +TGGAGFIGS R L+ +V+V+DKLTYAG L +L + S F+ DI Sbjct: 1 MTGGAGFIGSHFVRRLLTGAYPAFTGAEVVVLDKLTYAGRLENLAPVLGSPSLIFVHGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + D +V+FAAESHVDRS+ A EF+ TN++GT LL + Sbjct: 61 CDGPLVADLMD--GSDMVVHFAAESHVDRSVADAAEFVRTNVLGTHTLLR---------A 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ ISTDEVYGS+D G ++ED P P+SPYSA+KASSD L ++ T+G+PV Sbjct: 110 ATDAAVDRFVYISTDEVYGSIDSGSWTEDAPLEPNSPYSASKASSDLLARSFHRTHGLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYGP+ FPEKLIP +T ++ G+ V LYGDG+NVRDWL+V+DH R + LV ++ Sbjct: 170 IITRCSNNYGPHQFPEKLIPRFVTHLLNGTKVPLYGDGENVRDWLHVDDHCRGIALVAER 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE Y+IGG E N ++ LLD L+ +S ++ + DR GHDRRY++D S Sbjct: 230 GRPGEIYHIGGGTELSNRELTAR---LLD-LLGVDWS---MVEPVTDRKGHDRRYSLDIS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNR 357 KI +E+G+ P+ E GL +TV WY++N W PL +P+ S + E + +R Sbjct: 283 KISAELGYAPRVPFEEGLAQTVQWYVENRTLWEPLTA--RPELPVSDGASGAETARSR 338 >gi|266631460|emb|CBA11571.1| NDP-glucose-4,6-dehydratase [Streptomyces lydicus] Length = 328 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 153/342 (44%), Positives = 220/342 (64%), Gaps = 22/342 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI----QVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 M ++VTGGAGFIGS R L+ ++ V+DKLTYAGN +L + F+F++ Sbjct: 1 MNILVTGGAGFIGSHYVRTLLGTPGAADCGRLTVLDKLTYAGNTANLATVWDDPRFTFVR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+CD + + + D +V+FAAESHVDRSI GA +FI +N++GT LL+ Sbjct: 61 GDVCDAGLVDKLVADH--DTVVHFAAESHVDRSIAGASDFIMSNVVGTQTLLDA------ 112 Query: 117 CLSQDKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + +D F F+ ISTDEVYGS+D G ++E P P+SPY+A KASSD + LA+G T+ Sbjct: 113 --ALHHQDSFGTFVLISTDEVYGSIDTGSWTESHPVAPNSPYAAAKASSDLITLAYGRTH 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNN+G +HFPEKLIPL +T +++G V LYGDG ++RDWL+++DHV+ + L Sbjct: 171 GLDVRVTRCSNNFGHHHFPEKLIPLFVTNLLDGKQVPLYGDGLHIRDWLHIDDHVQGIEL 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V KGR GE YNIGG E N + G LL+A + E + + DR GHDRRY+ Sbjct: 231 VRTKGRPGEVYNIGGGTELSNTALT---GRLLEA----CGAGWERVDHVADRKGHDRRYS 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 +D +KI++E+G+ P + +S L +T+ WY + WW PL + Sbjct: 284 VDWTKIRTELGYAPHRDFDSALAETIDWYRTHREWWEPLKRR 325 >gi|330508401|ref|YP_004384829.1| dTDP-glucose 4,6-dehydratase [Methanosaeta concilii GP-6] gi|328929209|gb|AEB69011.1| dTDP-glucose 4,6-dehydratase [Methanosaeta concilii GP-6] Length = 333 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 154/335 (45%), Positives = 210/335 (62%), Gaps = 18/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGG GFIGS R ++N ++L +D + N+ +L + ++F + DI Sbjct: 1 MNLLVTGGLGFIGSNFIRLMLNRHDDCRILNLDAQGFGSNIQNLADYKDDRRYTFFRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + S ++ + D +VNFAAE+HVDRSI D F+ +N+ G F LLE R Sbjct: 61 ADSSLVSSLVE--KADLVVNFAAETHVDRSISRPDSFLHSNVNGVFCLLEAIR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D R++QISTDEVYG + +G +ED PSSPYSA+KA+ D VLA+ TYG+ Sbjct: 112 -DHNPSVRYVQISTDEVYGDILRGSSTEDSTLRPSSPYSASKAAGDVFVLAYARTYGLEA 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C+NNYGPY FPEKLIP I R EG + +YG G+NVRDW+YV DH RA+ VL + Sbjct: 171 MITRCTNNYGPYQFPEKLIPKTIIRAKEGLKIPIYGTGENVRDWIYVTDHCRAVEQVLNR 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNI ER N+ F F+L+ ++ KS + I F+EDRPGHD RY++DSS Sbjct: 231 GRRGEIYNISAGEERTNL---FIAKFILE-MLGKS---EDQIEFVEDRPGHDARYSLDSS 283 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+GW P+ + E GL TV WYL N W+ PL Sbjct: 284 RIRKELGWRPERSFEEGLQTTVEWYLQNPDWYGPL 318 >gi|62737783|gb|AAX98199.1| sugar dehydratase/epimerase [Streptomyces aizunensis] Length = 328 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 210/344 (61%), Gaps = 23/344 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-----IQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M +++TG AGFIGS L R ++ K ++V V+D LTYAGN SL + F+F+ Sbjct: 1 MNILITGAAGFIGSHLVRTILGPDKPLGDDVRVTVLDALTYAGNRASLAAVEDEPGFTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + + DA+V+ AAESHVDRSI AD F+ TN++GT LLE Sbjct: 61 HGDITDALLVDRLVAAH--DAVVHLAAESHVDRSIWRADAFVRTNVLGTHTLLEAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F+ +STDEVYGS+ G E P PSSPYSA+KASSD L LA+ HT+ Sbjct: 116 ------RHGTGPFVHVSTDEVYGSVPVGSSVESDPLTPSSPYSASKASSDLLALAYHHTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY PEK+IPL +TR++ G+ V LYGDG NVRDWL+V+DH RAL Sbjct: 170 GLDVRVTRCSNNYGPYQHPEKVIPLFVTRLLSGAAVPLYGDGGNVRDWLHVDDHCRALLA 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR G YNIGG E N ++ G LLDA + + + + DR GHDRRY+ Sbjct: 230 VLTDGRAGHTYNIGGGTELTNKELT---GLLLDA----CGAGWDRVEHVTDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +D +KI++E+G+ P + GL +TV WY N +W EL+ Sbjct: 283 VDWTKIRTELGYTPAHDFAEGLAETVAWYRTNRPFWAAPGAELQ 326 >gi|268322278|emb|CBH32800.1| NDP-glucose-4,6-dehydratase [Streptomyces sp. C23201NS3] Length = 328 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 148/335 (44%), Positives = 217/335 (64%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS R L+ ++V V+D+LTYAGN +L + + F F++ DI Sbjct: 6 ILVTGGAGFIGSTYVRTLLGPDGPGDVKVTVLDRLTYAGNPANLDPVREHPAFGFVRGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + D +VNFAAESHVDRS+ + F+ TN++GT +LL+ + L Sbjct: 66 TDSALVGMLMARV--DQVVNFAAESHVDRSLASSAPFVRTNVVGTQVLLD------AALQ 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+QISTDEVYGS+ +G +SE+ P P+SPYSA+KA++D L L++ ++G+ V Sbjct: 118 AGVRT---FVQISTDEVYGSIAEGSWSEERPLAPNSPYSASKAAADLLALSYHRSHGLDV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYG + +PEK+IPL +T +++G V LYGDG+NVRDWL+V+DHV+ + LV Sbjct: 175 RVTRCSNNYGSHQYPEKIIPLFVTNLLDGKKVPLYGDGRNVRDWLHVDDHVQGVELVRTA 234 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N + L D L+ + + + ++ DR GHDRRY++D + Sbjct: 235 GRPGEVYNIGGGTELTNRE-------LADLLVTACDADGDSVEYVADRKGHDRRYSVDCT 287 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI++E+G+ P N+ +GL +TV WY N WW PL Sbjct: 288 KIRTELGYRPVRNLTAGLAETVAWYRGNRKWWEPL 322 >gi|125381143|gb|ABN41486.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] Length = 344 Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 222/339 (65%), Gaps = 13/339 (3%) Query: 1 MRLIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS L + + +++ +D LTYA N+++L ++ + + F+Q DI Sbjct: 2 MYILVTGGAGFIGSNFLLFFFEKNPDAKIINLDFLTYASNISNLNKLKNNPNYVFIQGDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 62 SDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 121 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KK++F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 122 FLKKNEFKQSFFYQISTDEVYGSLGENGKFTEDNTYAPNSPYSASKASADMLVRSYHHTY 181 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ ++SNCSNNYGP+ EKLIP I + + + +YGDG+N+RDWLYV+DH A+ Sbjct: 182 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNNTQIPIYGDGKNIRDWLYVKDHCVAIES 241 Query: 236 VLKKG--RIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + K +I E +NIG N E +NIDI +I LD ++PK+ S+ E I F++DR Sbjct: 242 IYKYAFEKIKENNNFFDVFNIGTNEEWQNIDIANKICSYLDNVLPKNTSYKEQITFVKDR 301 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 GHDRRYAIDS+K++ IGW QEN SGL KT+ WY++ Sbjct: 302 AGHDRRYAIDSTKLQKTIGWKAQENFNSGLEKTIKWYIE 340 >gi|170760703|ref|YP_001787449.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A3 str. Loch Maree] gi|169407692|gb|ACA56103.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A3 str. Loch Maree] Length = 326 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 154/332 (46%), Positives = 206/332 (62%), Gaps = 14/332 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY + K ++V DKLTYAGNLN+LKE+ + F+ DICD Sbjct: 4 LLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVNGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E LK++ PD I+NFAAESHVDRSI G F TN +GT LL+ +W D Sbjct: 64 SEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSSCAD 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RFLQ+STDEVYGS+ D F ED P+SPYSA+KA +D +V A+ TYG+PV Sbjct: 124 K----RFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFWKTYGLPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C NNYGPY + EKLIP+ I + + + +YGDG N+R+W++V DH A+ L Sbjct: 180 IITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFY 239 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIG E N+D + ++ T+ I+ + DR GHD+RYA+DSS Sbjct: 240 GTPGEVYNIGSGEEVSNVD-------MAKIILSNLSKPTDAIKKVNDRLGHDKRYALDSS 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KIK ++ W +E G+ +T+ WY +N WW Sbjct: 293 KIKDQLSWACSYKLEEGIKETIEWYKNNQTWW 324 >gi|257452249|ref|ZP_05617548.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_5R] gi|317058792|ref|ZP_07923277.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_5R] gi|313684468|gb|EFS21303.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_5R] Length = 369 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 158/365 (43%), Positives = 223/365 (61%), Gaps = 41/365 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIG+ +YL+ I ++ DKLTYAG +L+E Q F++ DICD Sbjct: 5 LVTGAAGFIGTNFIKYLLQKYSDIFIVAFDKLTYAGRKENLEEEIQKEQIKFIEGDICDS 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ D +VNFAAESHVDRSI + F+ TN++GT LLE + +W + Sbjct: 65 TLVEEIFIKYSIDYVVNFAAESHVDRSIESSRVFLETNVMGTQNLLEIAKKFWMIGKDNY 124 Query: 123 KDQF-----RFLQISTDEVYGSLD----KG-------------LFSEDMPYNPSSPYSAT 160 F +FLQ+STDEVYGSL+ KG F+E+MP P SPYSA+ Sbjct: 125 GYPFYQEGKKFLQVSTDEVYGSLEINTSKGKKIGKYRKIFGTKFFNEEMPLAPRSPYSAS 184 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 KA++D LV+A+ TY +PV ++ SNNYGPY FPEKLIPL I ++++G ++ +YG+G+NV Sbjct: 185 KAAADLLVMAYKETYHLPVNITRSSNNYGPYQFPEKLIPLMIQKILQGKNLPIYGNGKNV 244 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-----KSY 275 RDW+YVEDH R + LVL+ G++GE YNIGG E N +IV LL+ ++ + Y Sbjct: 245 RDWIYVEDHCRGIELVLQHGKLGEIYNIGGLYEETNFNIVL---LLLEKIVQIIKENQEY 301 Query: 276 S----------HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + ELI +++DR GHD RYA++ SKI+ ++GW P+ GL KT+ WYL Sbjct: 302 QKYLQKDISKINKELISYVQDRLGHDERYAMNISKIQDQLGWQPKIEFSVGLQKTILWYL 361 Query: 326 DNNWW 330 + W Sbjct: 362 QHQDW 366 >gi|119961190|ref|YP_948859.1| dTDP-glucose 4,6-dehydratase [Arthrobacter aurescens TC1] gi|119948049|gb|ABM06960.1| dTDP-glucose 4,6-dehydratase [Arthrobacter aurescens TC1] Length = 355 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 160/349 (45%), Positives = 216/349 (61%), Gaps = 26/349 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS +LV + V V+DKLTYAGN+ SL + SN + +Q DI D Sbjct: 26 QILVTGGAGFIGSNFVHFLVENTDHTVTVLDKLTYAGNIESLAGLP-SNRVALVQGDIAD 84 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +K D +V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 85 AAVVEGLVKTH--DVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAAR--------- 133 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+E+ PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 134 -KHDKRFHHISTDEVYGDLELDDLERFTENTPYNPSSPYSSTKAGSDLLVRAWVRSFGLQ 192 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++ DH A+ +++ Sbjct: 193 ATISNCSNNYGPYQHVEKFIPRQITNVIDGVRPKLYGKGENVRDWIHANDHSSAVLAIIE 252 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG + E+ N ++V E+ +Y H + DRPGHD RYAIDS Sbjct: 253 KGRIGETYLIGADGEKNNKEVV-ELILEHMGQSRDAYDH------VVDRPGHDLRYAIDS 305 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 SK+++E+GW P+ N ++G+ T+ WY DN WWRP ++ + + Y+K Sbjct: 306 SKLRTELGWSPEYSNFDAGIKNTIEWYRDNEGWWRP--QKAQTEAKYTK 352 >gi|229825469|ref|ZP_04451538.1| hypothetical protein GCWU000182_00829 [Abiotrophia defectiva ATCC 49176] gi|229790032|gb|EEP26146.1| hypothetical protein GCWU000182_00829 [Abiotrophia defectiva ATCC 49176] Length = 352 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 168/335 (50%), Positives = 222/335 (66%), Gaps = 21/335 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++IVTGGAGFIG+ Y++ + + + +DKLTYAGNL +L+E ++ F F++ DI Sbjct: 8 VKVIVTGGAGFIGTNFIYYVLKKHPENEYICLDKLTYAGNLANLEEALKNPKFKFIKGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +E +P+ +VNFAAESHVDRS+L DEF+ TNI G +LL+ R Sbjct: 68 ADREFVYKLFEEEKPEQVVNFAAESHVDRSVLFPDEFLRTNITGVGVLLDACR------- 120 Query: 120 QDKKDQFRFLQISTDEVYGSL----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF Q+STDEVYG L + F+E P NPSSPYS++KAS+D + LA+ TY Sbjct: 121 --KYGIERFHQVSTDEVYGDLPLDREDLFFTETTPLNPSSPYSSSKASADMIALAYHRTY 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYG Y FPEKLIPL I + +YG+G NVRDWLYVEDH A+ L Sbjct: 179 GLPVTISRCSNNYGAYQFPEKLIPLMIYNAEHDKELPVYGEGINVRDWLYVEDHCIAIDL 238 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+KG+ GE YN+GG+NE+KNID+V I L P+S LI+++ DRPGHD RYA Sbjct: 239 ILEKGKFGEVYNVGGHNEKKNIDVVKTI--LAATNKPES-----LIKYVTDRPGHDLRYA 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ID KI E+GW P E G+ T+ WYLDN+ W Sbjct: 292 IDPKKIGEELGWKPLTPFEKGIEYTIKWYLDNSKW 326 >gi|311063529|ref|YP_003970254.1| RmlB dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum PRL2010] gi|310865848|gb|ADP35217.1| RmlB dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum PRL2010] Length = 340 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 215/337 (63%), Gaps = 25/337 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + + V+D LTYAGNL+++K + ++ F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHITVLDALTYAGNLDNIKPLLGDHV-DFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKLVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW T+G+ Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPHKFTEETPYHPSSPYSSTKASSDLLVRAWRRTFGVR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + +SNCSNNYGPY EK IP IT ++EG LYGDG NVRDW++ +DH A++ +L Sbjct: 178 MTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGDGLNVRDWIHTDDHSSAVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE Y IG N ER NI ++ +I ++ P + H ++DRPGHDRRYAIDS Sbjct: 238 KGVLGETYLIGANGERNNITVLKDILEVM-GKAPDDFDH------VKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+ W P+ + +SGL T+ WY DN WW P+ Sbjct: 291 TKLQTELEWKPRHTDFQSGLEHTIKWYTDNRDWWEPV 327 >gi|282880805|ref|ZP_06289501.1| dTDP-glucose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] gi|281305339|gb|EFA97403.1| dTDP-glucose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] Length = 382 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 158/359 (44%), Positives = 223/359 (62%), Gaps = 33/359 (9%) Query: 4 IVTGGAGFIGSALCRYLVN----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIG+ +YL++ + I+V+++D LTYAGNL ++K + F++ DI Sbjct: 5 LVTGAAGFIGANFIKYLLDKKYKNEDIKVIILDALTYAGNLGTIKNDIDNKRCFFVKGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ E D +VNFAAESHVDRSI F++ NI+GT L++ R W + Sbjct: 65 RDKDLADKLFAEHDIDFVVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAW-VMG 123 Query: 120 QDK------KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +D K R+ Q+STDEVYGSL +G F+E P P SPYSA+K S+D +V+A+ Sbjct: 124 KDAQGYPTWKAGKRYHQVSTDEVYGSLGAEGFFTEQTPLCPHSPYSASKTSADMIVMAYR 183 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY +P ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G NVRDWLYVEDH +A Sbjct: 184 DTYRMPASITRCSNNYGPYHFPEKLIPLIIKNILEGKQLPVYGKGDNVRDWLYVEDHCKA 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL--------------------I 271 + +V+++G+ GE YN+GG+NE KNIDIV I + D + I Sbjct: 244 IDMVVREGKEGEVYNVGGHNEMKNIDIVKLTIKTIHDMMQQDKDLRKVLKKQEVDEQGNI 303 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + LI F+ DR GHD+RYAID +KIK+++GW+P+ G+ KT+ W L + W Sbjct: 304 KIDWINDNLITFVADRLGHDQRYAIDPTKIKNDLGWYPETMFADGIVKTIKWNLQHQDW 362 >gi|88604328|ref|YP_504506.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] gi|88189790|gb|ABD42787.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] Length = 328 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 203/327 (62%), Gaps = 11/327 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + + +TGG+GFIGS YL ++ I ++ D LTYA N +L + + + F+ +I Sbjct: 7 LTIFLTGGSGFIGSNFINYLFDNCPDISIINYDALTYAANQKALTQQKNNPNYHFIHGNI 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + A+ PD I+NFAAESHVDRSI A FI+TNI G + LLE R Sbjct: 67 CDLPTVTDAITTTNPDIIINFAAESHVDRSITDASPFISTNIQGVYNLLEICR------- 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K D +F+QISTDEVYG+L G F+E P P SPY+A+KAS+D L LAW TYG+P Sbjct: 120 --KHDDLKFIQISTDEVYGTLGPDGFFTEASPIKPRSPYAASKASADLLTLAWHETYGLP 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C+NNYGP+ PEKLIP+ I R ++ + +YG+G NVRDW++V DH + V++ Sbjct: 178 VNITRCTNNYGPWQHPEKLIPMTIQRCLQKEKIPVYGNGLNVRDWIHVSDHCSGIATVMQ 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G++GE YNIG NE KN+D+V +I + L LI F+ DR GHD RYAID Sbjct: 238 NGKVGEVYNIGSKNEWKNLDLVKKIINITRDLTGDPGVSENLISFVPDRQGHDFRYAIDP 297 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 KI E+ W P+ + GL KT+ WYL Sbjct: 298 DKITRELSWCPKITFKEGLVKTIRWYL 324 >gi|117927624|ref|YP_872175.1| dTDP-glucose 4,6-dehydratase [Acidothermus cellulolyticus 11B] gi|117648087|gb|ABK52189.1| dTDP-glucose 4,6-dehydratase [Acidothermus cellulolyticus 11B] Length = 324 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 217/335 (64%), Gaps = 24/335 (7%) Query: 5 VTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +TGGAGFIGS R +++ +V V DKLTYAGNL +L ++ S + F+Q DI Sbjct: 1 MTGGAGFIGSHYVRTMLSGGYAGYEDAEVTVYDKLTYAGNLANLAPVADSPRYRFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + L D +VNFAAESHVDRSI GA EF+ TN++G L E +C+ Sbjct: 61 CDGRLLAEVLPGH--DLVVNFAAESHVDRSIYGAAEFVVTNVLGAQTLFE------ACVQ 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + +STDEVYGS+ +G ++ED P+SPYSA+KA +D L A+ TYG+ + Sbjct: 113 AGIP---RVVHVSTDEVYGSILEGSWTEDHILEPNSPYSASKAGADLLARAYAGTYGLNI 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NNYGPY FPEK+IPL IT +I+G V LYGDG NVRDWL+V+DH R + +V +K Sbjct: 170 SVTRCTNNYGPYQFPEKVIPLFITNLIDGKKVPLYGDGLNVRDWLHVDDHCRGIQIVAEK 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N ++ + LLDA + + + F+EDR HDRRY++D + Sbjct: 230 GRPGEYYNIGGGLELTNRELTQK---LLDA----CGATWDSVEFVEDRKNHDRRYSLDDT 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI++ +G+ P+ + + GL +T+ WY +N WWWRPL Sbjct: 283 KIRA-LGYEPRVSFDEGLAQTIRWYHENEWWWRPL 316 >gi|197303887|ref|ZP_03168922.1| hypothetical protein RUMLAC_02625 [Ruminococcus lactaris ATCC 29176] gi|197297070|gb|EDY31635.1| hypothetical protein RUMLAC_02625 [Ruminococcus lactaris ATCC 29176] Length = 317 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 214/323 (66%), Gaps = 26/323 (8%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 +++ +DKLTYAGNL++L + F F++ DICDRE + +E QPD IVNFAAESHV Sbjct: 9 RIVCLDKLTYAGNLSTLAPVMDHPKFRFVKADICDREAVNQLFEEEQPDIIVNFAAESHV 68 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYG--SLDKG- 143 DRSI F+ TNI+GT +L++ R K R+ Q+STDEVYG LD+ Sbjct: 69 DRSIENPGIFLETNIMGTAVLMDACR---------KYGITRYHQVSTDEVYGDLPLDRPD 119 Query: 144 -LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI 202 F+E+ P + SSPYS++KAS+D LVLA+ TYG+PV +S CSNNYGPYHFPEKLIPL I Sbjct: 120 LFFTEETPIHTSSPYSSSKASADLLVLAYYRTYGLPVTISRCSNNYGPYHFPEKLIPLMI 179 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE 262 + + +YG+G NVRDWLYVEDH RA+ L++ KGR+GE YN+GG+NE +NIDIV Sbjct: 180 ANALADKPLPVYGEGLNVRDWLYVEDHCRAIDLIIHKGRVGEVYNVGGHNEMRNIDIV-- 237 Query: 263 IGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +I K E LI ++ DR GHD RYAID +KI +E+GW P+ E G+ KT+ Sbjct: 238 ------KMICKELGKPESLITYVADRKGHDMRYAIDPTKIYNELGWLPETKFEDGIKKTI 291 Query: 322 CWYLDNNWWWRPL----YKELKP 340 WYL++ WW + Y+E P Sbjct: 292 RWYLEHRDWWEKIINGEYQEYSP 314 >gi|201067859|ref|ZP_03217750.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni BH-01-0142] gi|205355880|ref|ZP_03222649.1| dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni CG8421] gi|46487338|gb|AAS99059.1| Tgh114 [Campylobacter jejuni] gi|58585443|gb|AAW79064.1| RlmB [Campylobacter jejuni] gi|62868782|gb|AAY17570.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] gi|108514903|gb|ABF93241.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] gi|108514939|gb|ABF93261.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] gi|167412372|gb|ABZ79830.1| unknown [Campylobacter jejuni] gi|200004553|gb|EDZ05026.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni BH-01-0142] gi|205346314|gb|EDZ32948.1| dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni CG8421] Length = 343 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 220/338 (65%), Gaps = 13/338 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA N+++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD+F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 121 FLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNSPYSASKASADMLVRSYHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ ++SNCSNNYGP+ EKLIP I + + + +YGDG+N+RDWLYV+DH A+ Sbjct: 181 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNNAQIPIYGDGKNIRDWLYVKDHCVAIES 240 Query: 236 VLKKG--RIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + K +I E +NIG N E +NIDI +I LD ++PK+ S+ E I F++DR Sbjct: 241 IYKYAFEKIKENNSFFDVFNIGTNEEWQNIDIANKICSYLDNVLPKNTSYKEQITFVKDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 GHDRRYAID +K++ IGW QEN SGL+KT+ WY+ Sbjct: 301 AGHDRRYAIDPTKLQRVIGWKAQENFNSGLDKTIQWYI 338 >gi|45934785|gb|AAS79449.1| putative TDP-glucose 4,6-dehydratase [Streptomyces bikiniensis] Length = 323 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 151/339 (44%), Positives = 210/339 (61%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTG AGFIGS R L++ VL +DKLTYAGN +L E++ +FL Sbjct: 1 MRVLVTGAAGFIGSHFVRQLLSGSYPELAGAHVLSLDKLTYAGNTENLAEVAGHPRHTFL 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICD + AL+ D +V+FAAESHVDRSI + F+TTN++GT LL Sbjct: 61 HGDICDPPTVAQALR--GTDLVVHFAAESHVDRSITDSAAFVTTNVLGTQTLLR------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S + RF+ +STDEVYGS+ +G +E P +P+SPY+A+KASSD L LA+ T+ Sbjct: 113 ---SALEAGVSRFVHVSTDEVYGSIPEGSSTEADPLDPNSPYAASKASSDLLALAFHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEK++PL +T ++EG + LYGDG + RDWL+V+DH R + + Sbjct: 170 GLDVRVTRCSNNYGPHQHPEKVVPLFVTHLLEGLRLPLYGDGLHRRDWLHVDDHCRGIAM 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +GR GE YNIGG E N+D+ + + A ++ + DR HDRRY Sbjct: 230 VAARGRAGEVYNIGGGTELSNVDLTRRLLGVFGA-------DWSVVDRVPDRAAHDRRYC 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D+ KI E+GW P+ + GL +TV WY DN WW+ L Sbjct: 283 VDTRKITEELGWAPRVAFDRGLAETVDWYRDNGTWWKAL 321 >gi|159904977|ref|YP_001548639.1| dTDP-glucose 4,6-dehydratase [Methanococcus maripaludis C6] gi|159886470|gb|ABX01407.1| dTDP-glucose 4,6-dehydratase [Methanococcus maripaludis C6] Length = 307 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 212/326 (65%), Gaps = 21/326 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIG RY+V + ++ V+D LTYAG+L +L ++S+ F++ DIC Sbjct: 1 MKILVTGGAGFIGCNFVRYMVQNYDHEITVLDNLTYAGSLENLADVSEK--IEFIKGDIC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E A+K+ D+I++FAAESHVD SI + F+ TNI GT+ LLE R + Sbjct: 59 SEEDASRAMKDV--DSIIHFAAESHVDNSIKNPENFVKTNIFGTYTLLEYARKF----GI 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 DK FL +STDEVYGS + G F E+ +PSSPYSATKA SD LV A+ TYG+ Sbjct: 113 DK-----FLHVSTDEVYGSTENGFFKEEDRLDPSSPYSATKAGSDLLVNAYHRTYGLNTF 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +++C NN+GPY +PEKLIP+ I + ++ + +YGDG NVRDW+YVEDH + V G Sbjct: 168 ITHCGNNFGPYQYPEKLIPVLIKKALKNEKLPIYGDGLNVRDWIYVEDHCTGIDTVFNNG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YNIG E+ N++IV F+L+ L LI F++DRPGHDRRYA+DS+K Sbjct: 228 KYGEVYNIGSGYEKTNLEIV---KFILNELDKPE----NLIEFVKDRPGHDRRYALDSTK 280 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD 326 +++ +GW P+ E L TV WYLD Sbjct: 281 MRN-LGWAPKWEFEKALKYTVNWYLD 305 >gi|147677416|ref|YP_001211631.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] gi|146273513|dbj|BAF59262.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] Length = 323 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 163/333 (48%), Positives = 212/333 (63%), Gaps = 20/333 (6%) Query: 1 MRLIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS ++ Q++ +DKLTYAGNL +L+ + + F++ DI Sbjct: 1 MKLLVTGGAGFIGSNFIHFIHRKHWDWQIVNLDKLTYAGNLKNLEGL-DVDRHRFVRGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E +PDAIVNFAAESHVDRSI FI +N+ G +LLE R Sbjct: 60 ADPDVVNELAGE-RPDAIVNFAAESHVDRSISNPSPFIDSNVKGVQVLLEAAR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +F+Q+STDEVYGSL G F+E+ P P+SPYSA+KA++D L A+ TY +P Sbjct: 112 --RFGIKKFIQVSTDEVYGSLGPDGAFNENSPLAPNSPYSASKAAADLLCRAYYKTYHLP 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNN+GP +PEK IP+ IT + V +YGDG NVRDWLYV DH RAL V+ Sbjct: 170 VIVTRCSNNFGPRQYPEKFIPVVITCALANRPVPVYGDGLNVRDWLYVADHCRALEAVIL 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNIGG E N+++ EI LL P S LIRF+ DRPGHDRRYA+DS Sbjct: 230 AGRAGEVYNIGGGRELTNLELAGEILRLLGK--PAS-----LIRFVADRPGHDRRYAVDS 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SKI+ E+GW P E L +TV WY + WW Sbjct: 283 SKIRRELGWRPVCEFEKALGETVRWYAASRGWW 315 >gi|332300859|ref|YP_004442780.1| dTDP-glucose 4,6-dehydratase [Porphyromonas asaccharolytica DSM 20707] gi|332177922|gb|AEE13612.1| dTDP-glucose 4,6-dehydratase [Porphyromonas asaccharolytica DSM 20707] Length = 386 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 160/359 (44%), Positives = 209/359 (58%), Gaps = 26/359 (7%) Query: 5 VTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTG AGFIG+ L YL L ++++IDKLTYAGN S++ + + F+Q DICD Sbjct: 15 VTGAAGFIGTNLAYYLSEALAPDERIVLIDKLTYAGNYRSIEPLIDNERIIFVQADICDA 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + P ++N AAESHVDRSI F+ TNI+G LL+ R WS S Sbjct: 75 EAMDDLFTRYAPHYLINLAAESHVDRSIEDPAIFVRTNILGVQTLLDTIRNHWSTTSGRG 134 Query: 123 -----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ LQ+STDEVYGSL K G F E P +P SPYSA KAS+D L A HT+ Sbjct: 135 SYPVWQEGRMMLQVSTDEVYGSLGKEGFFVESTPLDPRSPYSAAKASADLLCKAAVHTHH 194 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+ + CSNNYGPY FPEKLIPL I + + G + +YG G+NVRDWLYV DH RAL+LV Sbjct: 195 APVVWTRCSNNYGPYQFPEKLIPLVIRQCLLGKEIPIYGTGENVRDWLYVTDHCRALHLV 254 Query: 237 LKKGRIGERYNIGGNNERKNIDIVF------------------EIGFLLDALIPKSYSHT 278 + +G+ G YNIGG+NE N++IV I +L A + + Sbjct: 255 VTQGKAGTAYNIGGHNEHTNLEIVRIIIDKLHDRLSKEPARAERISEILGAQVQPELINE 314 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 +LI F+ DR GHD RY ID + I E+GW P G+ T+ WYLD+ W + + E Sbjct: 315 QLITFVRDRLGHDARYGIDPTFIHQELGWLPSIPFAEGIGYTIDWYLDHFDWVKGITDE 373 >gi|154488171|ref|ZP_02029288.1| hypothetical protein BIFADO_01743 [Bifidobacterium adolescentis L2-32] gi|154083644|gb|EDN82689.1| hypothetical protein BIFADO_01743 [Bifidobacterium adolescentis L2-32] Length = 340 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/338 (47%), Positives = 208/338 (61%), Gaps = 29/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + + V+DKLTYAGN ++ + QS + + DICD Sbjct: 11 ILVTGGCGFIGANFVRYVARNHPDVHITVLDKLTYAGNPANIDGLPQSQV-ELVIGDICD 69 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 S L+ P DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 70 A----SLLERIVPGCDAIVHFAAESHNDNSIFDPEPFIRTNVEGTMRLLEAAR------- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF ISTDEVYG L D F E+ PY PSSPYSA+KA+SD+LV AW TYG Sbjct: 119 ---KYDVRFHHISTDEVYGDLALDDPARFGENSPYRPSSPYSASKAASDHLVRAWTRTYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH A++ + Sbjct: 176 LRATISNCSNNYGPYQHVEKFIPRQITSIMEGVRPKLYGTGENVRDWIHTEDHSSAVWEI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIGE Y IG + E NI ++ I L+ + ++ DRPGHDRRYAI Sbjct: 236 LTRGRIGETYLIGADGEMSNIAVMRMILRLMGCA-------EDAFDWVRDRPGHDRRYAI 288 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 DSSK+++E+GW P + + E+GL T+ WY+ N WW P Sbjct: 289 DSSKLRTELGWKPVRTDFEAGLQATIAWYVANRAWWEP 326 >gi|116754266|ref|YP_843384.1| dTDP-glucose 4,6-dehydratase [Methanosaeta thermophila PT] gi|116665717|gb|ABK14744.1| dTDP-glucose 4,6-dehydratase [Methanosaeta thermophila PT] Length = 344 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 218/336 (64%), Gaps = 19/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGG GFIGS Y + + +V+ +D+LTYAGN +L +I + F++ DI Sbjct: 2 MRLLVTGGCGFIGSNFIHYALREHDDWEVVNLDRLTYAGNPANLSDIEGDERYRFVRGDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + ++ DA+VNFAAE+HVDRSIL FI TN+ GT +LLE R Sbjct: 62 ADRDLVDGLFRD-GLDAVVNFAAETHVDRSILDPSPFIDTNVRGTQVLLEAAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D RF+ ISTDEVYGS+ +G F+ED P P+SPY+A+KA++D L A+ +YG+PV Sbjct: 114 --NHDVGRFVHISTDEVYGSVTEGRFTEDSPLRPNSPYAASKAAADLLCRAYHISYGVPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SNNYGPY FPEKLIPL I + G + +YG+G VRDWLYVED+ RA+ +VL K Sbjct: 172 MVTRSSNNYGPYQFPEKLIPLMIRNALAGMDLPVYGEGAQVRDWLYVEDNCRAIGVVLMK 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTELIRFIEDRPG--HDRRY 294 GR GE YNIGG +ER+NI++V I +L + P+ + LI+ I D G HD RY Sbjct: 232 GRPGEIYNIGGGSERRNIEVVEMICRVLGERLNRDPEDFKR--LIKHIRDPRGAAHDFRY 289 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A++ SK++ +GW PQ E GL +TV WYL N W Sbjct: 290 ALECSKMRG-LGWMPQVTFEDGLARTVDWYLANQDW 324 >gi|21323099|dbj|BAB97727.1| dTDP-D-glucose 4,6-dehydratase [Corynebacterium glutamicum ATCC 13032] Length = 377 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 159/341 (46%), Positives = 209/341 (61%), Gaps = 29/341 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTGGAGFIG+ R V + V+DKLTYAGN ++LK + S + + ++ DIC Sbjct: 42 LLVTGGAGFIGANFVRQTVEQHPEYTHITVLDKLTYAGNADNLKGLPDSKV-TLIEGDIC 100 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S +K+ D V+FAAESH D S+ F+ TN+IGTF+LLE R Sbjct: 101 DAELVDSLVKDH--DITVHFAAESHNDNSLNDPSPFVHTNLIGTFVLLEAVR-------- 150 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF ISTDEV+G L D F+E Y PSSPYSATKA SD+LV AW ++GI Sbjct: 151 --KHNKRFHHISTDEVFGDLELDDPNRFTETTAYKPSSPYSATKAGSDHLVHAWIRSFGI 208 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++L+L Sbjct: 209 QATMSNCSNNYGPYQHIEKFIPRQITNILAGLTPKLYGTGEQVRDWIHVDDHNDAVHLIL 268 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+IGE Y IG +N+ N V E+ L L +Y H + DRPGHD RYA+D Sbjct: 269 SKGKIGETYIIGADNDHVNNKQVIELICELMGLDKNAYEH------VADRPGHDMRYAMD 322 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRP 333 S+K+++E+GW P+ M GL +T+ WY +N WWRP Sbjct: 323 STKLRTELGWAPKYTDVDSGMRKGLEQTIDWYRENEAWWRP 363 >gi|158521027|ref|YP_001528897.1| dTDP-glucose 4,6-dehydratase [Desulfococcus oleovorans Hxd3] gi|158509853|gb|ABW66820.1| dTDP-glucose 4,6-dehydratase [Desulfococcus oleovorans Hxd3] Length = 349 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 216/333 (64%), Gaps = 7/333 (2%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVDI 59 ++VTGGAGFIG+ + ++ + +++ +D L GN ++L + + + F++ + Sbjct: 11 ILVTGGAGFIGTNFIYHALDASFQCRIVNLDALLCGGNASNLDRLPDPARSRYRFVRGKV 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + E Q + +FAA++HVDRSI +F+ +N++GTF LL+ +W + Sbjct: 71 QDGALLDRLFAEEQFAGVFHFAAQTHVDRSITDPGDFVESNVVGTFRLLDTCLKYWRRGA 130 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D FR + +STDEVYGSL +G FSE PY+PSSPYSA+KA SD+LV ++ TYG+P Sbjct: 131 LDP--DFRMVHVSTDEVYGSLGSEGRFSETSPYDPSSPYSASKAGSDHLVKSYVRTYGLP 188 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++NCSNN+GPY +PEKLIPL I ++ + +YGDG+NVRDWLYV DH AL V + Sbjct: 189 AMVTNCSNNFGPYQYPEKLIPLMIASILNEEPLPVYGDGKNVRDWLYVLDHCEALMRVFE 248 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 GR GE YNIGG E +NI++V + L+D + + + + L+RF+ DRPGHDRRYAID Sbjct: 249 AGRPGESYNIGGGQEYENIELVHMLCDLVDTRLGRPEAQSRRLVRFVTDRPGHDRRYAID 308 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +SKIK + W P+ + L++TV WYL N W Sbjct: 309 ASKIKHALDWSPRHDFTRALDQTVTWYLSNRQW 341 >gi|189440430|ref|YP_001955511.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum DJO10A] gi|189428865|gb|ACD99013.1| dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum DJO10A] Length = 340 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 212/336 (63%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRGI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTERTPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP+ EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPFQHVEKFIPRQITNVLEGLRPKLYGNGENVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG N ER NI ++ +I ++ P ++ +++DRPGHDRRYAIDS Sbjct: 238 KGRLGETYLIGANGERNNITVLRDILAVM-GQDPDAFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLRTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEP 326 >gi|310286572|ref|YP_003937830.1| dTDP-glucose 4,6-dehydratase involved rhamnose biosynthesis [Bifidobacterium bifidum S17] gi|309250508|gb|ADO52256.1| dTDP-glucose 4,6-dehydratase involved rhamnose biosynthesis [Bifidobacterium bifidum S17] Length = 340 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 207/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+V N + V V+D LTYAGN+ ++ + + + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVDNHPDVHVTVLDALTYAGNIANIAGLPEDRV-EFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDRIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 119 -KYGVRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDMLVRAWTRTYGLR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH ++ +L Sbjct: 178 TTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG N ER NI + L ++ + +++DRPGHDRRYAIDS Sbjct: 238 RGRIGETYLIGANGERNNITV-------LRMILKMMGQDEDAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + ESGL T+ WY +N WW P Sbjct: 291 TKLQTELGWRPTHTDFESGLRATIEWYTENRAWWEP 326 >gi|304437016|ref|ZP_07396979.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369967|gb|EFM23629.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 335 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 218/336 (64%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG+ Y L + Q++ D LTYAGN+ +L E +S+ F+F++ DI Sbjct: 1 MKMIVTGGAGFIGANFVYYELREHPEDQIVCYDALTYAGNIATLAEARKSSQFTFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + + +PD +VNFAAESHVDRSI + F+ TNIIGT ILL+ R Sbjct: 61 ADRGAVYALFAREKPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSILLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ LF+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLLFTEETPLHTSSPYSSSKASADLLVQAYARTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYG + FPEKLIPL + R ++G + +YGDG+NVRDWL+V+DH A+ Sbjct: 172 GVPVTISRCSNNYGAFQFPEKLIPLMVIRAMKGEQLPVYGDGKNVRDWLHVDDHCSAIDA 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++++G G YN+GG+NE NID+V I +L E I ++ DR GHDRRYA Sbjct: 232 IVRRGAEGSVYNVGGHNEHSNIDVVRTILRVLG-------RAEEQISYVTDRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI E+GW PQ + G+ V WY D+ WW Sbjct: 285 IDPTKIGRELGWQPQTKFDDGIEAVVAWYRDHTSWW 320 >gi|14601230|ref|NP_147763.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] gi|5104852|dbj|BAA80166.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] Length = 330 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/336 (47%), Positives = 206/336 (61%), Gaps = 20/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS+ RY+VN +VLV DKLTYAG L +L ++ + F++ DI Sbjct: 1 MRVLVTGGAGFIGSSFVRYIVNTTDWEVLVYDKLTYAGRLENLHDVI--DRIGFMRGDIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E L EF+PD +VNFAAE+HVDRSI F+ TNIIG F +LE R Sbjct: 59 DEEQFGRVLTEFEPDVVVNFAAETHVDRSINEPAPFMRTNIIGVFTILEAIR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + DQ L +STDEVYG L +E P NPSSPYSA+KAS D L+ A+G TYG+ Sbjct: 111 KRIDQIVLLHVSTDEVYGDLWNTGKEATESDPLNPSSPYSASKASGDLLIKAYGRTYGLK 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + NNYGPY EKLIP I R++ G +YGDG +RDWLYVED RA+++VL+ Sbjct: 171 YRIVRPCNNYGPYQHVEKLIPRTIIRILHGKPPVIYGDGSQIRDWLYVEDTARAIHVVLE 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YN+ G DIV I L P+ Y + + + RPG DRRYA+ Sbjct: 231 KGVDGEIYNVCGGMASTVKDIVVNI--LESMGKPRDY-----LVYGKSRPGEDRRYAMKC 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI++ +GW P ++ GL TV WY++N WWWRPL Sbjct: 284 DKIRN-LGWAPHVTLKEGLKITVKWYIENRWWWRPL 318 >gi|210633779|ref|ZP_03297850.1| hypothetical protein COLSTE_01767 [Collinsella stercoris DSM 13279] gi|210159078|gb|EEA90049.1| hypothetical protein COLSTE_01767 [Collinsella stercoris DSM 13279] Length = 340 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/338 (46%), Positives = 210/338 (62%), Gaps = 29/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS ++V + + V V+DKLTYAGN ++ + ++ + DICD Sbjct: 11 IVVTGGCGFIGSNFVHHVVRERPGVHVTVLDKLTYAGNPENIACLP-ADRVELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + E DA+V++AAESH D SI F+ TN+ GT+ L+E R Sbjct: 70 AELVDRLVSE--ADAVVHYAAESHNDNSIADPSPFLKTNVRGTYTLIEACR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY PSSPYS+TKA+SD LV AW T+G+ Sbjct: 119 -KHDVRYHHVSTDEVYGDLALDDPARFTEETPYRPSSPYSSTKAASDMLVRAWVRTFGLR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +I+G LYGDG+NVRDW++ EDH A++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNLIDGVRPKLYGDGKNVRDWIHTEDHSSAVWAILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +GRIGE Y IG + ER NI ++ EI F DA + ++ DRPGHDRRYAI Sbjct: 238 RGRIGETYLIGADGERDNITVLREILKAFGRDA---------DDFDWVRDRPGHDRRYAI 288 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRP 333 DS+K++ E+GW PQ + +GL +T+ WY N WWRP Sbjct: 289 DSTKLRRELGWEPQRIDFAAGLAETIAWYRANESWWRP 326 >gi|308445197|gb|ADO32771.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces vietnamensis] Length = 321 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 160/337 (47%), Positives = 217/337 (64%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTG AGFIGS R ++ + V V+D+LTYAG ++L E + F+ Sbjct: 1 MRLLVTGAAGFIGSHYVRQILAGAYPETEDVHVTVVDRLTYAGRRDNLPE--EHGRLDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICDR + L DAIV+FAAESHVDRS+ G EF+ TN++GT LL+ Sbjct: 59 RGDICDRGLLDRVLPGH--DAIVHFAAESHVDRSLTGPGEFVRTNVMGTQQLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L R L +STDEVYGS+D G ++ED P P+SPY+A+KASSD + A+ T+ Sbjct: 111 AALHTGVD---RVLHVSTDEVYGSVDSGTWTEDSPLLPNSPYAASKASSDLIARAYHRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSN+YGP PEKLIP +TR++ G V LYGDG+NVR+WL+V+DH RAL+L Sbjct: 168 GLDVRVTRCSNDYGPRQHPEKLIPHFVTRLLTGRKVPLYGDGRNVREWLHVDDHCRALHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KGR GE YNIGG + N ++ + LL A +++R +EDR GHD RYA Sbjct: 228 VLTKGRAGEIYNIGGGSGMSNREMTARLLDLLGA-------DWDMVRHVEDRLGHDFRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID SKI+ E+G+ P+ ++ESGL V WY D+ +WR Sbjct: 281 IDDSKIRDELGYAPRWSIESGLGAVVDWYRDHPEFWR 317 >gi|310780520|ref|YP_003968852.1| dTDP-glucose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] gi|309749843|gb|ADO84504.1| dTDP-glucose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] Length = 399 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 164/383 (42%), Positives = 228/383 (59%), Gaps = 49/383 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +VTGGAGFIG+ +Y++ K ++I DKLTYAGNL ++KE N +F++ DI Sbjct: 1 MNYLVTGGAGFIGANFIKYILKKYKKISIIILDKLTYAGNLGTIKEELSDNRVTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C+RE + + ++ D +VNFAAESHVDRSI F+ TNIIGT LL+ + W+ Sbjct: 61 CNRELVENIFMKYDIDCVVNFAAESHVDRSIENPGIFLKTNIIGTQTLLDAAKAHWTIGK 120 Query: 120 QDK-----KDQFRFLQISTDEVYGSLDKGL------------------------------ 144 +K KD +FLQ+STDEVYGSL++ + Sbjct: 121 DEKGYPLYKDGKKFLQVSTDEVYGSLERDIPEGTELKVETEELKVILKDREVMPRIFGEN 180 Query: 145 -FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT 203 F+E +PSSPY+ +KA +D LV A+ TY +PV ++ CSNNYGPYHFPEKLIPL I Sbjct: 181 FFTEKTSLDPSSPYATSKAGADMLVRAYWETYHMPVNVTRCSNNYGPYHFPEKLIPLIIK 240 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 ++EG + LYGDG+ VRDWLYVEDH + + +V+ GR+GE YNIGG NE +NI IV Sbjct: 241 NILEGKKLPLYGDGKQVRDWLYVEDHCKGIDMVINSGRLGEPYNIGGFNEEQNITIVKLT 300 Query: 264 GFLLDALIPKSYSHTE------------LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 + L+ + ++ + LI + DR GHD RYAID +K E+G++P+ Sbjct: 301 IDTIARLMKEQPNYQKILKTSLENINHNLIAHVHDRLGHDARYAIDPTKTVRELGFYPET 360 Query: 312 NMESGLNKTVCWYLDNNWWWRPL 334 + G+ KT+ WYLDN W + + Sbjct: 361 SFVVGIEKTIKWYLDNQEWVKEV 383 >gi|157415397|ref|YP_001482653.1| hypothetical protein C8J_1077 [Campylobacter jejuni subsp. jejuni 81116] gi|157386361|gb|ABV52676.1| hypothetical protein C8J_1077 [Campylobacter jejuni subsp. jejuni 81116] gi|167412355|gb|ABZ79815.1| unknown [Campylobacter jejuni] gi|315932275|gb|EFV11218.1| dTDP-glucose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 327] Length = 343 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 159/338 (47%), Positives = 221/338 (65%), Gaps = 13/338 (3%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA ++++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPNAKIINLDFLTYASDISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVSLVGEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD+F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 121 FLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNSPYSASKASADMLVRSYHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ ++SNCSNNYGP+ EKLIP I + + + +YGDG+N+RDWLYV+DH A+ Sbjct: 181 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNETPIPIYGDGKNIRDWLYVKDHCVAIES 240 Query: 236 VLKKG--RIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + K +I E +NIG N E +NIDI +I LD ++PK+ S+ E I F++DR Sbjct: 241 IYKYAFEKIKENNSFFDVFNIGTNEEWQNIDIANKICSYLDNVLPKNTSYKEQITFVKDR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 GHDRRYAIDS+K++ IGW QEN SGL+KT+ WY+ Sbjct: 301 AGHDRRYAIDSTKLQRVIGWKAQENFNSGLDKTIQWYI 338 >gi|31044153|gb|AAP42865.1| NanG2 [Streptomyces nanchangensis] Length = 331 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 216/343 (62%), Gaps = 27/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-------VLVIDKLTYAGNLNSLKEISQSNLFS 53 M+L+VTG AGFIGS R L+ + V V+DKLTYAG L++L + + Sbjct: 1 MKLLVTGAAGFIGSTYARRLLARGGAEWGPDVSHVTVLDKLTYAGTLSNLD--TADPRLT 58 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+ DICD + + + + + + +V+FAAESHVDRSI GAD F+ TN+ GT LL+ Sbjct: 59 FVHGDICDADLVDTLMA--RANQVVHFAAESHVDRSITGADPFVRTNVEGTHTLLQ---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + RF+ +STDEVYGS++ G E +P+SPY+A+KA+SD + LA+ Sbjct: 113 -----AALRHGVERFVHVSTDEVYGSVETGFSPETAVLDPNSPYAASKAASDLIALAYHR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+ V ++ CSNNYGP+ FPEK+IPL IT +++G V LYGDG NVRDWL+VEDH R + Sbjct: 168 THGLDVRVTRCSNNYGPHQFPEKIIPLFITNLLDGEDVPLYGDGLNVRDWLHVEDHCRGV 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV KG GE YNIGG N ++ G LLDA +S +R++EDR GHDRR Sbjct: 228 ELVRTKGSPGEIYNIGGGTALTNRELT---GRLLDA-CGAGWSR---VRYVEDRKGHDRR 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 YA+ K + E+G+ P+ + +GL +TV WY DN WW PL + Sbjct: 281 YAVQDDKARDELGYRPRHDFAAGLAETVAWYRDNRPWWEPLKR 323 >gi|284992710|ref|YP_003411264.1| dTDP-glucose 4,6-dehydratase [Geodermatophilus obscurus DSM 43160] gi|284065955|gb|ADB76893.1| dTDP-glucose 4,6-dehydratase [Geodermatophilus obscurus DSM 43160] Length = 331 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 161/340 (47%), Positives = 218/340 (64%), Gaps = 24/340 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ +V V DKLTYAGNL +L ++ S + F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRTLLTGGYPGFEDAEVTVFDKLTYAGNLANLVPVADSPRYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DIC + +AL D +VNFAAESHVDRSI GA EF+ TN++G + E Sbjct: 61 QGDICSAADLDAALPGH--DVVVNFAAESHVDRSITGASEFVLTNVLGAQQVFE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL + R + +STDEVYGS+D+G ++ED P+SPYSA KA D + A+ TY Sbjct: 113 ACLRHGVR---RVVHVSTDEVYGSIDEGSWTEDHLLEPNSPYSAAKAGGDLVARAYAKTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + ++ CSNNYGPYHFPEK+IPL +T +++G V LYG+G NVRDWL+V+DH R + L Sbjct: 170 GLDISITRCSNNYGPYHFPEKVIPLFVTNLLDGHKVPLYGEGANVRDWLFVDDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR-PGHDRRY 294 VL++GR GE YNIGG E N ++ + LL+A + +S+ E I ++ R GHD RY Sbjct: 230 VLEQGRPGEFYNIGGGRELSNRELTEK---LLEA-TGRDWSYVENI--VDPRGGGHDLRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++D SK + +G+ P+ E GL TV WY DN WW PL Sbjct: 284 SVDFSKTAA-LGYAPRTGFEDGLALTVQWYRDNRAWWEPL 322 >gi|303247231|ref|ZP_07333505.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio fructosovorans JJ] gi|302491390|gb|EFL51278.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio fructosovorans JJ] Length = 340 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 161/340 (47%), Positives = 215/340 (63%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFS---FLQ 56 MRL+VTGG GFIGS R +++ + ++ +D LTYAGN SL +I ++ S F + Sbjct: 1 MRLLVTGGCGFIGSNFIRDMLDRHDDLTIVNLDALTYAGNRQSLSDIEAAHGGSRYFFAR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI + E +E + +A+VNFAAE+HVDRSI A FI TN+ GT LL+ RL+ Sbjct: 61 GDIANSELALYLFEEHRIEAVVNFAAETHVDRSITDASPFIRTNVAGTQSLLDAARLFGI 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ +STDEVYG+L G FSED P P+SPYSA+KA +D LV A TY Sbjct: 121 K---------RFVHVSTDEVYGTLGPDGKFSEDTPLAPNSPYSASKAGADMLVRAAHETY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +++ CSNNYGP+ FPEKLIPL +R + + +YGDG+NVRDW+YV DH R + L Sbjct: 172 GMDTVITRCSNNYGPFQFPEKLIPLMFSRAMADEPLPVYGDGKNVRDWIYVTDHCRGVEL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRY 294 L KGR GE YN GG+ E+ NI++V I L AL P+S LIRF+ DRPGHDRRY Sbjct: 232 ALIKGRAGEVYNFGGDAEKPNIEVVRTI---LAALGKPES-----LIRFVTDRPGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 A+D +K E+G+ P+ + G+ TV WY N W + + Sbjct: 284 AMDFTKAARELGFAPEYDFTRGIAATVDWYRQNGEWLKSV 323 >gi|227509201|ref|ZP_03939250.1| dTDP-glucose 4,6-dehydratase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191347|gb|EEI71414.1| dTDP-glucose 4,6-dehydratase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 334 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 150/341 (43%), Positives = 217/341 (63%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + ++VTGGAGFIGS L+ + L+ D LTYAGNL++L +I + + F++ DI Sbjct: 8 LNILVTGGAGFIGSNFIHLLLGHRQSDRLINFDALTYAGNLDNLDDIPEGATYRFIKGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E ++ + +Q + IVNFAA+SHVDRSI+ A F+ TNI G LLE R + Sbjct: 68 ADKEAVKKVVSNYQINVIVNFAAQSHVDRSIIDATPFVHTNIEGVNTLLEVAREY----H 123 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 DK F+Q+STDEVYGS + F E P NPSSPY+ATKAS+D L L++ T+G P Sbjct: 124 LDK-----FVQVSTDEVYGSTPSQARFDEQTPLNPSSPYAATKASADLLALSYFKTFGTP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ +NNYG Y FPEKL+PL +T + G + +YG+GQN RDWL V+D+ RA+ +V+ Sbjct: 179 VCITRSANNYGRYQFPEKLVPLMVTAALRGKKLPIYGNGQNKRDWLNVQDNCRAIEMVMS 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ G+ YNI G + N+ IV I L A+ P+ + F++DRP +D+ YAID Sbjct: 239 NGKPGQIYNIAGRQHKTNLQIVKIIEKQLAAIHPQ-------VTFVKDRPANDQLYAIDD 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 SKI+ E+GW P+ + E G+ + WY+ + WW+PL K ++ Sbjct: 292 SKIRHELGWRPEFSFEIGMGDVIDWYVIHPEWWQPLLKRVQ 332 >gi|255036654|ref|YP_003087275.1| dTDP-glucose 4,6-dehydratase [Dyadobacter fermentans DSM 18053] gi|254949410|gb|ACT94110.1| dTDP-glucose 4,6-dehydratase [Dyadobacter fermentans DSM 18053] Length = 351 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 214/333 (64%), Gaps = 8/333 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R VN + + +D LTYAGNL +L++I + ++F++ DI Sbjct: 3 KILITGGAGFIGSHVVRRFVNFHPEYHIYNLDALTYAGNLENLRDIENAPNYTFVKGDIV 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + + +V+ AAESHVDRSI F+ TN++GT LL + W Sbjct: 63 DAGFIDNLFTDNDFHGVVHLAAESHVDRSISDPMSFVMTNVVGTVNLLNAAKKAWKDDFS 122 Query: 121 DKKDQFRFLQISTDEVYGSL-DKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ RF +STDEVYG L D G F E Y+P SPYSA+KASSD+ V A+ +TY +P Sbjct: 123 DR----RFYHVSTDEVYGELHDPGTFFVETTSYDPRSPYSASKASSDHFVRAYHNTYKLP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP HFPEKLIPL I +I+ + +YG G+N+RDWL+VEDH A+ ++ Sbjct: 179 VVISNCSNNYGPNHFPEKLIPLMIHNIIQQKPLPVYGKGENIRDWLFVEDHAIAIDVIFH 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAID 297 G G+ YNIGG+NE KNID+V + ++D + + + +LI ++ DR GHD RYAID Sbjct: 239 NGANGDTYNIGGHNEWKNIDLVHLLCEIMDRKLGRGEGESAKLITYVTDRAGHDLRYAID 298 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++K+ E+GW P GL +TV WYL N W Sbjct: 299 ATKLSEELGWKPSLQFAEGLERTVDWYLTNQDW 331 >gi|19551583|ref|NP_599585.1| dTDP-D-glucose 4,6-dehydratase [Corynebacterium glutamicum ATCC 13032] gi|62389232|ref|YP_224634.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glutamicum ATCC 13032] gi|41324566|emb|CAF19048.1| DTDP-GLUCOSE 4,6-DEHYDRATASE [Corynebacterium glutamicum ATCC 13032] Length = 339 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 159/341 (46%), Positives = 209/341 (61%), Gaps = 29/341 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTGGAGFIG+ R V + V+DKLTYAGN ++LK + S + + ++ DIC Sbjct: 4 LLVTGGAGFIGANFVRQTVEQHPEYTHITVLDKLTYAGNADNLKGLPDSKV-TLIEGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S +K+ D V+FAAESH D S+ F+ TN+IGTF+LLE R Sbjct: 63 DAELVDSLVKDH--DITVHFAAESHNDNSLNDPSPFVHTNLIGTFVLLEAVR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF ISTDEV+G L D F+E Y PSSPYSATKA SD+LV AW ++GI Sbjct: 113 --KHNKRFHHISTDEVFGDLELDDPNRFTETTAYKPSSPYSATKAGSDHLVHAWIRSFGI 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++L+L Sbjct: 171 QATMSNCSNNYGPYQHIEKFIPRQITNILAGLTPKLYGTGEQVRDWIHVDDHNDAVHLIL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+IGE Y IG +N+ N V E+ L L +Y H + DRPGHD RYA+D Sbjct: 231 SKGKIGETYIIGADNDHVNNKQVIELICELMGLDKNAYEH------VADRPGHDMRYAMD 284 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRP 333 S+K+++E+GW P+ M GL +T+ WY +N WWRP Sbjct: 285 STKLRTELGWAPKYTDVDSGMRKGLEQTIDWYRENEAWWRP 325 >gi|224284000|ref|ZP_03647322.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum NCIMB 41171] gi|313141151|ref|ZP_07803344.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] gi|313133661|gb|EFR51278.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] Length = 340 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 208/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+V N + V V+D LTYAGN+ ++ + + + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVDNHPDVHVTVLDALTYAGNIANIAGLPEDRV-EFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDRIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 119 -KYGVRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDMLVRAWTRTYGLR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 178 TTISNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG N E+ NI ++ I ++ + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGANGEKNNITVLRMILKMMG-------RDEDAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + ESGL T+ WY +N WW P Sbjct: 291 TKLQTELGWRPTHTDFESGLRATIEWYTENRAWWEP 326 >gi|227512085|ref|ZP_03942134.1| dTDP-glucose 4,6-dehydratase [Lactobacillus buchneri ATCC 11577] gi|227084737|gb|EEI20049.1| dTDP-glucose 4,6-dehydratase [Lactobacillus buchneri ATCC 11577] Length = 334 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 149/341 (43%), Positives = 215/341 (63%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + ++VTGGAGFIGS L+ + L+ D LTYAGNL++L +I + + F++ DI Sbjct: 8 LNILVTGGAGFIGSNFIHLLLGHRQSDRLINFDALTYAGNLDNLDDIHEGATYRFIKGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E I+ L +Q + IVNFAA+SHVDRSI+ F+ TNI G LLE R + Sbjct: 68 ADKETIKKVLSNYQINVIVNFAAQSHVDRSIIDTTPFVHTNIEGVNTLLEVAREYHLA-- 125 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+Q+STDEVYGS + F E P NPSSPY+ATKAS+D L L++ T+G P Sbjct: 126 -------KFVQVSTDEVYGSTPAQTRFDEQTPLNPSSPYAATKASADLLALSYFKTFGTP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ +NNYG Y FPEKL+PL +T + G + +YG+GQN RDWL V+D+ RA+ +V+ Sbjct: 179 VCITRSANNYGRYQFPEKLVPLMVTAALRGKKLPIYGNGQNKRDWLNVQDNCRAIEMVMS 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ G+ YNI G + N+ IV I L + P+ + F++DRP +D+ YAID Sbjct: 239 NGKPGQIYNIAGRQHKTNLQIVKIIEKQLAVIHPQ-------VTFVKDRPANDQLYAIDD 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 SKI+ E+GW P+ + E G+ + WY+ + WW+PL K++K Sbjct: 292 SKIRHELGWRPEFSFEIGMGDVIDWYVIHPEWWQPLLKKVK 332 >gi|154174154|ref|YP_001408482.1| dTDP-glucose 4,6-dehydratase [Campylobacter curvus 525.92] gi|112802740|gb|EAU00084.1| dTDP-glucose 4,6-dehydratase [Campylobacter curvus 525.92] Length = 345 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 215/330 (65%), Gaps = 7/330 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS Y +N ++ +DK+TYA ++NS+ IS + + ++ DICD Sbjct: 8 ILVTGGLGFIGSNFIPYFINKYSDYNIINLDKITYAADINSVGNISDLSRYKLIEGDICD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S ++ +++FAAE+HVD SI FI TN++GTF +L+ + +W Sbjct: 68 RLLLESIFDKYSIKEVIHFAAETHVDNSINKPGIFIETNVLGTFNVLDVAKSFWMEGPFR 127 Query: 122 KKDQF---RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K Q+ +F ISTDEVYG+L D G F+E Y P+SPYSA+KASSD +V ++ TYG+ Sbjct: 128 YKPQYETCKFYHISTDEVYGTLGDSGYFTEKSNYAPNSPYSASKASSDMIVRSYNRTYGM 187 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 L++NCSNNYGP EK IP I I+ + +YGDG+N+RDWLYV DH +A+ V Sbjct: 188 NTLITNCSNNYGPNQHIEKFIPTIIKNAIKNKPIPIYGDGKNIRDWLYVLDHCKAIDAVF 247 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLD--ALIPKSYSHTELIRFIEDRPGHDRRYA 295 GE+YNIGG ER N+DI +I +LD K S+ +LI FI+DR GHDRRYA Sbjct: 248 HNSLPGEKYNIGGKCERTNLDIANKICSILDKKIKPKKISSYKQLIVFIKDRAGHDRRYA 307 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +D+SKI++ +GW P+EN +SG++KTV WYL Sbjct: 308 VDTSKIETALGWTPEENFDSGIDKTVEWYL 337 >gi|119026525|ref|YP_910370.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium adolescentis ATCC 15703] gi|118766109|dbj|BAF40288.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 340 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 211/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 ADLLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYGI Sbjct: 119 -KYGIRYHHVSTDEVYGDLALDDPAKFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP+ EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 178 ATISNCSNNYGPFQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG N E+ NI ++ I ++ P+ + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGANGEKNNITVLRMILKMMGQ--PE-----DAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P+ + ESGL +T+ WY N WW P Sbjct: 291 TKLRTELGWTPRHTDFESGLAQTIEWYTQNRAWWEP 326 >gi|328886045|emb|CCA59284.1| dTDP-glucose 4,6-dehydratase [Streptomyces venezuelae ATCC 10712] Length = 322 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/337 (45%), Positives = 217/337 (64%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L++ D V V+DKLTYAGN ++L + +F+ Sbjct: 1 MRILVTGGAGFIGSHYVRSLLDGAYGGDGTDTVTVLDKLTYAGNRDNLP--ASHERLTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DIC + DA+V+FAAESHVDRS+ A EF+ TN++GT +LE Sbjct: 59 RGDIC--DLPLLLDLLPGHDAVVHFAAESHVDRSLESAAEFVRTNVLGTQTVLE------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + R + +STDEVYG++D+G ++ED P P+SPY+A+KASSD + ++ T+ Sbjct: 111 ---AALRTGVQRLVHVSTDEVYGTIDEGSWTEDFPLLPNSPYAASKASSDLVARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + ++ CSNNYGPY PEKLIP +T ++EG V +YGDG+NVR+WL+V+DH RA++L Sbjct: 168 GLDLSITRCSNNYGPYQHPEKLIPRFVTNLLEGHPVPVYGDGRNVREWLHVDDHCRAIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE YNIG NE N+D+ I L A +IR++EDR GHD RY+ Sbjct: 228 VLTTGRAGETYNIGSGNELTNLDLTERILDLCGA-------DRSMIRYVEDRKGHDLRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +KI+ E+G+ P+ + E GL +TV WY DN WW+ Sbjct: 281 LSDAKIREELGYTPRTSFEDGLRRTVDWYRDNPQWWK 317 >gi|298528456|ref|ZP_07015860.1| dTDP-glucose 4,6-dehydratase [Desulfonatronospira thiodismutans ASO3-1] gi|298512108|gb|EFI36010.1| dTDP-glucose 4,6-dehydratase [Desulfonatronospira thiodismutans ASO3-1] Length = 339 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 215/334 (64%), Gaps = 20/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 M ++VTGG GFIG+ +++N+ + ++ +DKLTYAGNL +L+ + + + F Sbjct: 1 MNILVTGGCGFIGTNFIYFMLNESQHTLINLDKLTYAGNLENLRSVEERYAGTRYFFEHG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + LK++ D IVNFAAESHVDRSI FI +N GT+ LLE +R Sbjct: 61 DICDAELVPDLLKKYSIDVIVNFAAESHVDRSINEPGMFIQSNTQGTYNLLEASR----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +F+Q+STDEVYGSL +G F ED P P+SPY+A+KAS+D L A+ TY Sbjct: 116 ----QAGIKKFIQVSTDEVYGSLGPQGSFKEDSPLAPNSPYAASKASADLLCRAFFKTYH 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV ++ CSNNYGP+ FPEKL+PL R + + +YG G+N+RDW+YV DH R + L Sbjct: 172 FPVTITRCSNNYGPFQFPEKLVPLTFLRARDNESIPVYGQGENIRDWIYVSDHCRGIKLC 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++K G YN GGN E KN+D++ +I LD ++ KS+ +LIRF++DRPGHD RYA+ Sbjct: 232 IEKAGPGSIYNFGGNAEYKNLDVIKKI---LD-IMGKSH---KLIRFVQDRPGHDLRYAM 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D + K ++G+ P GL T+ WYL+NN W Sbjct: 285 DFTLAKKDLGFEPSVKFTEGLELTINWYLNNNKW 318 >gi|194016249|ref|ZP_03054863.1| dTDP-glucose 4,6-dehydratase [Bacillus pumilus ATCC 7061] gi|194011722|gb|EDW21290.1| dTDP-glucose 4,6-dehydratase [Bacillus pumilus ATCC 7061] Length = 321 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 211/323 (65%), Gaps = 19/323 (5%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + L+ + +++ V DKLTYA + ++E+ + + F F+Q DI + Sbjct: 6 LITGGAGFIGLNFVKLLLQETDVRLTVFDKLTYASHPEEMEELLKLSHFRFIQGDIALQH 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A E DAI++FAAESHVDRSI A+ FI TN++GT+ +LE + L K Sbjct: 66 ELDQAFDEVY-DAIIHFAAESHVDRSIESAEPFIQTNVLGTYRMLE------AVLKGKAK 118 Query: 124 DQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ISTDEVYG L+ F+E P +P++PYSA+KASSD LV ++ HT+ +P ++ Sbjct: 119 ---KLIHISTDEVYGDLELNDPAFTEQTPLSPNNPYSASKASSDLLVKSYIHTHQLPAMI 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGP+ EKLIP I + I G + +YGDGQ +RDWLYVEDH RA+ VL+ G Sbjct: 176 TRCSNNYGPHQHEEKLIPTIIRKAINGEKIPIYGDGQQIRDWLYVEDHARAVKQVLENGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G+ YNIGG NE+ N+D+ I L SH + I F+EDR GHDRRYAID+SK+ Sbjct: 236 AGQVYNIGGGNEKTNLDLTKTI------LTQLGISH-DRIAFVEDRKGHDRRYAIDASKL 288 Query: 302 KSEIGWFPQENMESGLNKTVCWY 324 K E+GW + + E+G+ KT+ WY Sbjct: 289 KRELGWTQETSFEAGIEKTINWY 311 >gi|229816868|ref|ZP_04447150.1| hypothetical protein BIFANG_02116 [Bifidobacterium angulatum DSM 20098] gi|229785884|gb|EEP21998.1| hypothetical protein BIFANG_02116 [Bifidobacterium angulatum DSM 20098] Length = 340 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 209/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++A+ESH D SI + F+ TN+ GTF LLE R Sbjct: 70 ADLLERIVPGH--DAIVHYASESHNDNSIADPEPFLRTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYGI Sbjct: 119 -EHGIRYHHVSTDEVYGDLALDDPARFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGRGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG + ER NID++ I ++ + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGADGERNNIDVLRMILKMMGRA-------EDAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + ESGL +T+ WY N WW P Sbjct: 291 TKLQTELGWKPTHTDFESGLRQTIEWYTANRAWWEP 326 >gi|228961525|ref|ZP_04123135.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798143|gb|EEM45146.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 318 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 141/310 (45%), Positives = 210/310 (67%), Gaps = 20/310 (6%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D LTYAG+L K+I + + +SF +VDI DR+ + ++ + D +V+FAAESHVD Sbjct: 10 IVNLDVLTYAGDLTKHKDIEEKDNYSFAKVDIVDRQAVNQLFEQEKFDYVVHFAAESHVD 69 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD---KGL 144 RSI + FI+TN++GT +LL+ + + +F+ +STDEVYG LD Sbjct: 70 RSIAEPEVFISTNVLGTQVLLDAAKAFGIT---------KFVHVSTDEVYGELDFDPTTF 120 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+E+ P P+SPYSA+KASSD LV A+ T+G+P+ ++ CSNNYGP+HFPEKLIPL I+R Sbjct: 121 FTEETPLQPNSPYSASKASSDLLVRAYHETFGLPINITRCSNNYGPFHFPEKLIPLTISR 180 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 ++ V +YGDG+N+RDWL+V DH A+ LV+ +G GE YN+GG+NER N+++V Sbjct: 181 VLNNEKVPVYGDGKNIRDWLHVIDHCAAIDLVMHEGINGEVYNVGGHNERTNLEVV---- 236 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +I +LI F++DR GHD+RYAID +K++ ++GW P E+G+ +T+ WY Sbjct: 237 ---QTIISTLGKSEDLIEFVQDRLGHDKRYAIDPTKLE-KLGWKPTYTFETGIAQTIQWY 292 Query: 325 LDNNWWWRPL 334 LDN WW+ + Sbjct: 293 LDNEEWWKAI 302 >gi|291516584|emb|CBK70200.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum F8] Length = 340 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 211/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRPI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTEQTPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILEGLRPKLYGNGENVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+GE Y IG + ER NI ++ +I ++ P + +++DRPGHDRRYAIDS Sbjct: 238 QGRLGETYLIGADGERNNITVLRDILTVM-GKSPDDFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLQTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEP 326 >gi|150400813|ref|YP_001324579.1| dTDP-glucose 4,6-dehydratase [Methanococcus aeolicus Nankai-3] gi|150013516|gb|ABR55967.1| dTDP-glucose 4,6-dehydratase [Methanococcus aeolicus Nankai-3] Length = 312 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 158/336 (47%), Positives = 221/336 (65%), Gaps = 28/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M++++TGGAGFIG R +VN D +I+VL D L+YAG+L++LK+IS F++ Sbjct: 1 MKIVITGGAGFIGCNFVRMMVNKYPDYEIKVL--DNLSYAGSLDNLKDISDK--IEFIKG 56 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI ++E + ++LK+ DA+++FAAESHVD SI + F+ TN+ GT+ LLE R Sbjct: 57 DITNKEAVENSLKD--ADAVIHFAAESHVDNSIENPENFVKTNVFGTYNLLECAR----- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K D +FL ISTDE YGS+++G F E +P+SPYSA+KA SD LV A+ TYG+ Sbjct: 110 ----KNDIDKFLHISTDETYGSIERGSFKETDRLDPASPYSASKAGSDLLVSAYHTTYGL 165 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 L++ SNN+GPY +PEKLIP+ I I + + +YGDG NVRDW++VED+ + +V Sbjct: 166 NTLITRSSNNFGPYQYPEKLIPVLIKNAIYNNPLPIYGDGLNVRDWIFVEDNCSGVDVVF 225 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH-TELIRFIEDRPGHDRRYAI 296 KG IGE YNIGG NE+ N++I LI K + ELI F++DR GHDRRY+I Sbjct: 226 HKGEIGEVYNIGGGNEKTNLEIT--------KLILKELNKPEELITFVKDRLGHDRRYSI 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++K K+ +GW P+ E L TV WYL+N W+W Sbjct: 278 DTNKTKA-LGWEPKWEFEDALKYTVKWYLENKWFWE 312 >gi|291457002|ref|ZP_06596392.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium breve DSM 20213] gi|291381413|gb|EFE88931.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium breve DSM 20213] Length = 340 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 212/336 (63%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRGI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTERTPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP+ EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPFQHVEKFIPRQITNILEGLRPKLYGNGENVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG + ER NI ++ +I ++ P ++ +++DRPGHDRRYAIDS Sbjct: 238 KGRLGETYLIGADGERNNITVLRDILTVM-GKSPDAFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLRTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEP 326 >gi|297161815|gb|ADI11527.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces bingchenggensis BCW-1] Length = 331 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 215/343 (62%), Gaps = 27/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-------VLVIDKLTYAGNLNSLKEISQSNLFS 53 M+L+VTG AGFIGS R L+ + V V+DKLTYAG L++L + + Sbjct: 1 MKLLVTGAAGFIGSTYARRLLARGGAEWGPDVSHVTVLDKLTYAGTLSNLD--TADPRLT 58 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+ DICD + + + + + +V+FAAESHVDRSI GAD F+ TN+ GT LL+ Sbjct: 59 FVHGDICDADLVDTLMA--RAGQVVHFAAESHVDRSIAGADPFVRTNVEGTHTLLQ---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + RF+ +STDEVYGS++ G E +P+SPY+A+KA+SD + LA+ Sbjct: 113 -----AALRHGVERFVHVSTDEVYGSVETGFSPETAVLDPNSPYAASKAASDLIALAYHR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+ V ++ CSNNYGP+ FPEK+IPL IT +++G V LYGDG NVRDWL+VEDH R + Sbjct: 168 THGLDVRVTRCSNNYGPHQFPEKIIPLFITNLLDGEDVPLYGDGLNVRDWLHVEDHCRGV 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV KG GE YNIGG N ++ G LLDA +S +R++EDR GHDRR Sbjct: 228 ELVRTKGSPGEIYNIGGGTALTNRELT---GRLLDA-CGAGWSR---VRYVEDRKGHDRR 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 YA+ K + E+G+ P+ + +GL +TV WY DN WW PL + Sbjct: 281 YAVQDDKARDELGYRPRHDFAAGLAETVAWYRDNRPWWEPLKR 323 >gi|317482684|ref|ZP_07941698.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium sp. 12_1_47BFAA] gi|322690054|ref|YP_004209788.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis 157F] gi|316915930|gb|EFV37338.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium sp. 12_1_47BFAA] gi|320461390|dbj|BAJ72010.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis 157F] Length = 340 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 211/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRGI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTEQTPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILEGLRPKLYGNGENVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+GE Y IG + ER NI ++ +I ++ P + +++DRPGHDRRYAIDS Sbjct: 238 QGRLGETYLIGADGERNNITVLRDILTVM-GKSPDDFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLQTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEP 326 >gi|322691991|ref|YP_004221561.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456847|dbj|BAJ67469.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum JCM 1217] Length = 340 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 210/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ N+ + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 IIVTGGCGFIGSNFVHYVYNNHPDVHVTVLDALTYAGNLENIRPI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 DELLDKIVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTEQTPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP+ EK IP IT ++EG LYG+G NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPFQHVEKFIPRQITNILEGLRPKLYGNGLNVRDWIHTDDHSTGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG N ER NI ++ +I ++ P + +++DRPGHDRRYAIDS Sbjct: 238 KGRLGETYLIGANGERNNITVLRDILTVM-GKSPDDFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY DN WW P Sbjct: 291 TKLQTELGWKPTHTDFQKGLEQTIKWYTDNRAWWEP 326 >gi|311895225|dbj|BAJ27633.1| putative dTDP-glucose 4,6-dehydratase [Kitasatospora setae KM-6054] Length = 330 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 155/338 (45%), Positives = 213/338 (63%), Gaps = 23/338 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI----QVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 M ++VTGGAGFIG R L++ +V V+DKLTYAGNL +L ++ ++ Sbjct: 1 MHILVTGGAGFIGGNYVRRLLDGRSALPVDRVTVLDKLTYAGNLANLAPVADHPGLRVVE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + + L DA+VNFAAE+HVDRSI EF+ TN++GT LL+ R Sbjct: 61 GDIADPDLVPKLLGGV--DAVVNFAAETHVDRSIRDPAEFVRTNVLGTQNLLDAAR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+Q+STDEVYGS+D+G ++E+ P P+SPY+A KA +D L LA T+G Sbjct: 115 -----AARLPRFVQVSTDEVYGSIDEGAWTEEWPLAPNSPYAAAKAGADLLALACARTHG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + ++ CSNNYGPY FPEKL+PL +T ++ G V LYGDG NVRDWL+V+DH R + LV Sbjct: 170 LDLSVTRCSNNYGPYQFPEKLVPLFVTTLLRGGTVPLYGDGLNVRDWLHVDDHCRGIDLV 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +G GE YNIGG E N + G +LDA + +R + DR GHDRRYA+ Sbjct: 230 LAEGGPGEVYNIGGGRELDNRSLT---GLILDA----CGADWSAVRQVADRKGHDRRYAL 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D SK+++ +G+ P+ E GL +T+ WY ++ WWRPL Sbjct: 283 DDSKLRA-LGYRPEVAFEDGLAQTIAWYREHPDWWRPL 319 >gi|88319781|emb|CAF31365.1| putative dNDP-glucose 4, 6-dehydratase [Streptomyces sp. SCC 2136] Length = 328 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 152/339 (44%), Positives = 219/339 (64%), Gaps = 29/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTG AGFIGS R ++ QV +DKLTYAGN ++L + F+ Sbjct: 1 MRILVTGAAGFIGSHFVRNVLEGSYSGWEDAQVTALDKLTYAGNRDNLP--ASHERLVFV 58 Query: 56 QVDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + D+CDR+ +R E P DA+V+FAAE+HVDRS+ GA +F TN++GT LL+ Sbjct: 59 RGDVCDRKLLR----ELVPGHDAVVHFAAETHVDRSLEGAGDFFRTNVLGTQTLLD---- 110 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + L + R + +STDEVYGS+D+G ++E+ P P+SPY+A+KA SD + A+ Sbjct: 111 --AVLDSGVE---RVVHVSTDEVYGSIDEGSWTEEWPLAPNSPYAASKAGSDLVARAYWR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++G+ + ++ CSNNYGPY PEKLIPL +T ++EG V LYG+G NVR+WL+V+DH R + Sbjct: 166 SHGVDLSITRCSNNYGPYQHPEKLIPLFVTNLLEGRRVPLYGEGANVREWLHVDDHCRGI 225 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +LVL +GR GE YNIGG NER N+ I + L+ + + E I+ + DR HD R Sbjct: 226 HLVLNQGRAGEIYNIGGGNERTNLAIT-------EQLLELTGAGAEAIQRVPDRKAHDLR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 Y+I+ +KI+ E+G+ P+ E GL +TV WY DN WW+ Sbjct: 279 YSIEETKIREELGYAPRIGFEQGLAETVAWYRDNPDWWK 317 >gi|296505690|ref|YP_003667390.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] gi|296326742|gb|ADH09670.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] Length = 318 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 209/311 (67%), Gaps = 20/311 (6%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 ++ +D LTYAG+L K+I + +SF +VDI DR+ + ++ + D +V+FAAESHV Sbjct: 9 HIVNLDVLTYAGDLTKHKDIENKDNYSFAKVDIVDRQAVNQLFEQEKFDYVVHFAAESHV 68 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD---KG 143 DRSI + FI+TN++GT +LL+ + + +F+ +STDEVYG LD Sbjct: 69 DRSITEPEVFISTNVLGTQVLLDAAKAFGIT---------KFVHVSTDEVYGELDFDPTT 119 Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT 203 F+E+ P P+SPYSA+KASSD LV A+ T+G+P+ ++ CSNNYGP+HFPEKLIPL I+ Sbjct: 120 FFTEETPLQPNSPYSASKASSDLLVRAYHETFGLPINITRCSNNYGPFHFPEKLIPLTIS 179 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 R++ V +YGDG+N+RDWL+V DH A+ LV+ +G GE YN+GG+NER N+++V Sbjct: 180 RVLNDEKVPVYGDGKNIRDWLHVIDHCAAIDLVMHEGINGEVYNVGGHNERTNLEVV--- 236 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +I +LI F++DR GHD+RYAID +K++ ++GW P E+G+ +T+ W Sbjct: 237 ----QTIISTLGKSEDLIEFVQDRLGHDKRYAIDPTKLE-KLGWKPTYTFETGIAQTIQW 291 Query: 324 YLDNNWWWRPL 334 YLDN WW+ + Sbjct: 292 YLDNEEWWKAI 302 >gi|23464836|ref|NP_695439.1| dTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] gi|23325420|gb|AAN24075.1| dTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] Length = 347 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 210/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+V+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 18 IIVTGGCGFIGSNFVHYVVDYHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 77 ADLLDKIVPGH--DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVR--------- 125 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYGI Sbjct: 126 -KYGIRYHHVSTDEVYGDLALDDPAKFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIR 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 185 ATISNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILT 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG N E+ NI ++ I ++ P+ + +++DRPGHDRRYAIDS Sbjct: 245 KGRIGETYLIGANGEKNNITVLRMILKMMGQ--PE-----DAFDWVKDRPGHDRRYAIDS 297 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P+ + ESGL +T+ WY N WW P Sbjct: 298 TKLRTELGWTPRHTDFESGLKQTIEWYTQNRAWWEP 333 >gi|320459417|dbj|BAJ70038.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 409 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 205/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + + V+DKLTYAGN ++ + S + + DICD Sbjct: 80 ILVTGGCGFIGANFVRYVARNHPHVHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 138 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 139 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 187 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+ED PY+PSSPYSA+KASSD+LV AW TYG+ Sbjct: 188 -KHDVRFHHISTDEVYGDLALDDPARFTEDTPYHPSSPYSASKASSDHLVRAWVRTYGLR 246 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 247 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 306 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ + ++ DRPGHDRRYAID+ Sbjct: 307 RGRIGETYLIGADGEMSNIAVLRMILRLMG-------QPEDAFDWVRDRPGHDRRYAIDA 359 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + GL + WY ++ WW P Sbjct: 360 SKLRAELGWSPMHTDFAGGLRNVIDWYAEHRDWWAP 395 >gi|111021081|ref|YP_704053.1| dTDP-glucose 4,6-dehydratase [Rhodococcus jostii RHA1] gi|110820611|gb|ABG95895.1| dTDP-glucose 4,6-dehydratase [Rhodococcus jostii RHA1] Length = 334 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 159/337 (47%), Positives = 209/337 (62%), Gaps = 26/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + +QV V+D LTYAGN SL +S + F+ D+ Sbjct: 1 MRLLVTGGAGFIGANFVHQTVAERPDVQVTVLDALTYAGNRRSLDPVS--DRIEFVHGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + DA+V+FAAESH D S+ F+ TN+IGTF LL+ R Sbjct: 59 ADFALVDRLVGD--SDAVVHFAAESHNDNSLADPTPFVQTNVIGTFSLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ ISTDEVYG L D F+E PYNPSSPYSATKASSD LV AW ++G Sbjct: 110 ---AHDVRYHHISTDEVYGDLELDDPERFTESTPYNPSSPYSATKASSDLLVRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V+DH A++ + Sbjct: 167 VRATLSNCSNNYGPYQHVEKFIPRQITNLIDGVRPRLYGSGKNVRDWIHVDDHNAAVWTI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG +G+ Y IG + E N +V G LL+ + + + F+ DRPGHD RYAI Sbjct: 227 LEKGSLGQTYLIGADGEVDNRTVV---GTLLELFGRDA----DDLDFVTDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DS+++++E+GW PQ ++ SGL TV WY DN WWR Sbjct: 280 DSTRLRTELGWTPQYKDFRSGLEATVRWYRDNESWWR 316 >gi|9055396|gb|AAF82605.1| dTDP-glucose 4,6-dehydratase [Streptomyces rimosus subsp. paromomycinus] Length = 317 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 205/334 (61%), Gaps = 20/334 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ--VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS R L+ D Q V V+D LTYAGNL +L+ + F+Q D Sbjct: 1 MKTLVTGGAGFIGSHFVRSLLADGTGQEAVTVLDALTYAGNLANLRSVQGDPRLRFVQGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D R A DA+VN AAESHVDRSI +F +TN++GT LLE Sbjct: 61 ILD--SARVAELVAGHDAVVNLAAESHVDRSIANGAKFSSTNVLGTQTLLE--------- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + +STDEVYGS+ G ++E+ P P+SPY+A KA SD L LA+ T+G+ Sbjct: 110 AAVQAGGVTVVHVSTDEVYGSIPIGSWTEEEPLAPNSPYAAAKAGSDLLALAYHRTHGLD 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEK+IPL ITR+++G V LYGDG +RDWL+V DH RA+ LVL+ Sbjct: 170 VRITRCSNNYGPYQFPEKIIPLFITRLLQGRKVPLYGDGSQIRDWLHVVDHCRAIRLVLE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YN+GG E N L D L+ + + + + DR GHD+RY++D Sbjct: 230 GGRAGEIYNVGGGTELTN-------KHLTDRLLDACGADWDSVEHVADRKGHDQRYSVDW 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SKI+ E+G+ P+ + GL TV WY N WWR Sbjct: 283 SKIRDELGYEPRHTFDEGLASTVSWYRQNRDWWR 316 >gi|210633569|ref|ZP_03297813.1| hypothetical protein COLSTE_01730 [Collinsella stercoris DSM 13279] gi|210159104|gb|EEA90075.1| hypothetical protein COLSTE_01730 [Collinsella stercoris DSM 13279] Length = 344 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 152/338 (44%), Positives = 212/338 (62%), Gaps = 27/338 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+IVTGG GFIGS ++V + ++V V+DKLTYAGN ++ + S+ + DIC Sbjct: 14 RIIVTGGCGFIGSNFVHHVVREHPGVRVTVLDKLTYAGNPENIAGLP-SDRVELVVGDIC 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E DA+V++AAESH D SI F+ TN+ GT+ L+E R Sbjct: 73 DAALVDRLVSET--DAVVHYAAESHNDNSIADPSPFLETNVRGTYTLIEACR-------- 122 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K R+ +STDEVYG L D F+E+ PY PSSPYS+TKA+SD LV AW T+G+ Sbjct: 123 --KYGVRYHHVSTDEVYGDLALDDPARFTEETPYRPSSPYSSTKAASDMLVRAWARTFGL 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP +T +I+G+ LYGDG+NVRDW++ EDH A++ +L Sbjct: 181 KATISNCSNNYGPYQHVEKFIPRQVTNLIDGARPRLYGDGRNVRDWIHTEDHSSAVWAIL 240 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAI 296 +GR+GE Y +G + ER NI ++ E I +++ E ++ DRPGHDRRYAI Sbjct: 241 TRGRVGETYLVGADGERDNITVLRE--------ILRAFGRPEDDFDWVRDRPGHDRRYAI 292 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 D++K++ E+GW P + +GL +T+ WY DN WWRP Sbjct: 293 DATKLRRELGWEPAHTDFAAGLAETIRWYRDNEPWWRP 330 >gi|254393379|ref|ZP_05008524.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294817657|ref|ZP_06776299.1| Staurosporine biosynthesis dTDP-glucose 4,6-dehydratase StaB [Streptomyces clavuligerus ATCC 27064] gi|326446639|ref|ZP_08221373.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|197707011|gb|EDY52823.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294322472|gb|EFG04607.1| Staurosporine biosynthesis dTDP-glucose 4,6-dehydratase StaB [Streptomyces clavuligerus ATCC 27064] Length = 324 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 222/342 (64%), Gaps = 28/342 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGS R V++ + VL D+LTYAGN +L+ ++ F+F+ DIC Sbjct: 1 MRILVTGGVGFIGSHFVRGRVHEDTVTVL--DRLTYAGNPANLEPVA--GRFTFVHGDIC 56 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + LKE P D +VNFAAESHVDRSI GA EF+ TN++G LL+ +CL Sbjct: 57 DA----ALLKEVVPGHDLVVNFAAESHVDRSIAGAGEFVRTNVLGVQTLLQ------ACL 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R +Q+STDEVYGS+D G + E P +P+SPY+A+KA+ D + LA+ T+ +P Sbjct: 107 DAGIP---RVVQVSTDEVYGSIDTGSWDETAPLSPNSPYAASKAAGDLIALAYARTHRLP 163 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C NNYGPY +PEKL+PL +T +++G +V LYGDG +VRDW++V+DH RA+ LV + Sbjct: 164 VSITRCGNNYGPYQYPEKLVPLFVTHLLDGRNVPLYGDGGHVRDWIHVDDHCRAIRLVAE 223 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G GE Y++ G E NI++ LLDAL ++ + + + DR HDRRY++ Sbjct: 224 RGAPGEVYHVAGTAELTNIELTLR---LLDAL----HAPGQRVEPVPDRKAHDRRYSLTD 276 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +K+++ +G+ P+ E GL +TV WY + WW PL KE P Sbjct: 277 AKLRA-LGYAPRIAFERGLAETVAWYAAHRPWWEPL-KEHVP 316 >gi|313886433|ref|ZP_07820152.1| dTDP-glucose 4,6-dehydratase [Porphyromonas asaccharolytica PR426713P-I] gi|312924114|gb|EFR34904.1| dTDP-glucose 4,6-dehydratase [Porphyromonas asaccharolytica PR426713P-I] Length = 386 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/369 (43%), Positives = 211/369 (57%), Gaps = 31/369 (8%) Query: 5 VTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTG AGFIG+ L YL L ++++IDKLTYAGN S++ + + F+Q DICD Sbjct: 15 VTGAAGFIGTNLAYYLSEALAPDERIVLIDKLTYAGNYRSIEPLIDNERIIFVQADICDA 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + P ++N AAESHVDRSI F+ TNI+G LL+ R WS S Sbjct: 75 EAMDDLFTRYAPHYLINLAAESHVDRSIEDPAIFVRTNILGVQTLLDTIRNHWSTTSGRG 134 Query: 123 -----KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ LQ+STDEVYGSL K F E P +P SPYSA KAS+D L A HT+ Sbjct: 135 SYPVWQEGRMMLQVSTDEVYGSLGKESFFVESTPLDPRSPYSAAKASADLLCQAAVHTHH 194 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+ + CSNNYGPY FPEKLIPL I + + G + +YG G+NVRDWLYV DH RAL+LV Sbjct: 195 APVVWTRCSNNYGPYQFPEKLIPLVIRQCLLGKEIPIYGTGENVRDWLYVTDHCRALHLV 254 Query: 237 LKKGRIGERYNIGGNNERKNIDIVF------------------EIGFLLDALIPKSYSHT 278 + +G+ G YNIGG+NE N++IV I +L A + + Sbjct: 255 VTQGKAGTAYNIGGHNEHTNLEIVRIIIDQLHDRLSKEPARAERISEILGAQVQPELINE 314 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +LI F+ DR GHD RY ID + I E+GW P G+ T+ WYLD+ W + + Sbjct: 315 QLITFVRDRLGHDARYGIDPTFIHQELGWLPLIPFAEGIGYTIDWYLDHFDWVKGI---- 370 Query: 339 KPDNDYSKW 347 D DY + Sbjct: 371 -TDEDYQHY 378 >gi|89098352|ref|ZP_01171236.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] gi|89086901|gb|EAR66018.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] Length = 318 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 207/326 (63%), Gaps = 19/326 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTG AGFIG + D + V VID LTYA + +K++ F F++ +I Sbjct: 1 MELLVTGAAGFIGLNFVHLALKDPSVSVTVIDALTYASHPEEMKKLYSHPRFRFIKGNIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +A D+I++FAAESHVD SI A FI TNI GT+ LL L+ Sbjct: 61 NEQELETAFDRHY-DSIIHFAAESHVDNSIQNASLFIETNISGTYQLL---------LNM 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + ISTDEVYG+L+ G F+ED P P++PYSATKASSD LV ++ TY +P Sbjct: 111 LKGRAAKMIHISTDEVYGTLEAGKSAFTEDSPLMPNNPYSATKASSDLLVRSFRETYKLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + CSNNYGPY EK IP + + + + +YGDG +RDWLYVEDH RA+ L+L+ Sbjct: 171 VITTRCSNNYGPYQHSEKFIPTIVRKALNNEKIPVYGDGLQIRDWLYVEDHCRAIRLILE 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE YNIGG NE+ NI++V I LL P S LI ++EDR GHDRRYAIDS Sbjct: 231 KGRLGEVYNIGGGNEKTNIEVVKHILDLLGK--PDS-----LIEYVEDRKGHDRRYAIDS 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 SK++SE+GW + +E L +TV WY Sbjct: 284 SKLQSELGWKQEAPLEQALERTVDWY 309 >gi|300743860|ref|ZP_07072880.1| dTDP-glucose 4,6-dehydratase [Rothia dentocariosa M567] gi|300380221|gb|EFJ76784.1| dTDP-glucose 4,6-dehydratase [Rothia dentocariosa M567] Length = 332 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 156/342 (45%), Positives = 209/342 (61%), Gaps = 24/342 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS YL+++ + V V+DK+TYA N SL + + F+ + DI D Sbjct: 3 HLLVTGGAGFIGSNFVHYLLDNTEHTVTVLDKMTYAANKTSLDGLDVTR-FNLIVGDIAD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + Q DA++++AAESH D S+ + FI TN++GTF LLE R Sbjct: 62 RELTDELVA--QADAVIHYAAESHNDNSLANPEPFIHTNLVGTFTLLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R+ ISTDEV+G L D F+E PYNPSSPYS+TKA SD LV AW ++GI Sbjct: 111 -RHGTRYHHISTDEVFGDLALDDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIE 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG+G NVRDW++ DH A+ +L+ Sbjct: 170 ATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+IGE Y IG + E NI ++ I L+ K + E +R DRPGHD RYAID Sbjct: 230 SGKIGETYLIGADGEENNITVLRTILRLMG----KDENDFEHVR---DRPGHDMRYAIDG 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++++ E+GW PQ + E+GL T+ WY DN WW PL E++ Sbjct: 283 TRLREELGWEPQFTDFEAGLADTIAWYTDNRSWWEPLKAEVE 324 >gi|306822148|ref|ZP_07455530.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium ATCC 27679] gi|304554530|gb|EFM42435.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium ATCC 27679] Length = 340 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 156/335 (46%), Positives = 210/335 (62%), Gaps = 27/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 ADLLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 119 -KYGIRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH ++ +L Sbjct: 178 TTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KGR+GE Y IG N E+ NI ++ +I K +E +++DRPGHDRRYAID Sbjct: 238 KGRVGETYLIGANGEKNNITVL--------RMILKMMGQSEDAFDWVKDRPGHDRRYAID 289 Query: 298 SSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 S+K+++E+GW P + ESGL++T+ WY +N WW Sbjct: 290 STKLQTELGWTPTHTDFESGLSQTIDWYTENRQWW 324 >gi|171740945|ref|ZP_02916752.1| hypothetical protein BIFDEN_00006 [Bifidobacterium dentium ATCC 27678] gi|171742179|ref|ZP_02917986.1| hypothetical protein BIFDEN_01285 [Bifidobacterium dentium ATCC 27678] gi|171277793|gb|EDT45454.1| hypothetical protein BIFDEN_01285 [Bifidobacterium dentium ATCC 27678] gi|171278999|gb|EDT46650.1| hypothetical protein BIFDEN_00006 [Bifidobacterium dentium ATCC 27678] Length = 340 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 157/335 (46%), Positives = 209/335 (62%), Gaps = 27/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 ADLLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 119 -KYGIRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH ++ +L Sbjct: 178 TTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KGRIGE Y IG N E+ NI ++ +I K +E +++DRPGHDRRYAID Sbjct: 238 KGRIGETYLIGANGEKNNITVL--------RMILKMMGQSEDAFDWVKDRPGHDRRYAID 289 Query: 298 SSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 S+K+++E+GW P + ESGL +T+ WY +N WW Sbjct: 290 STKLQTELGWTPTHTDFESGLKQTIDWYTENRQWW 324 >gi|32265598|ref|NP_859630.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter hepaticus ATCC 51449] gi|32261646|gb|AAP76696.1| dTDP-D-glucose 4,6-dehydratase [Helicobacter hepaticus ATCC 51449] Length = 343 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 150/328 (45%), Positives = 212/328 (64%), Gaps = 6/328 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L++TGGAGFIGS Y ++ + +++ +D LTYAG+L +L+ + + F Q DICD Sbjct: 4 LLITGGAGFIGSNFILYFLHKYPQYRLINVDSLTYAGDLRNLQGAENTPNYEFRQGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL-WWSCLSQ 120 ++ I+ + + +++FAAESHVD SI F+ TN+ GTF LL L W+ S+ Sbjct: 64 KDFIKELFAHYDIEGVIHFAAESHVDNSIKNPSAFVETNVNGTFNLLHNAYLNWFDAPSR 123 Query: 121 DK--KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K K+ F ISTDEV+GSL + G FSE PY P+SPYSA+KASSD LV ++ HTYG+ Sbjct: 124 PKTNKEHCIFHHISTDEVFGSLGESGYFSESTPYAPNSPYSASKASSDMLVRSYHHTYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++NCSNNYGP EKLIP I + GS + +YGDGQN+RDWL+V+DH +A+ V Sbjct: 184 KTFITNCSNNYGPKQHDEKLIPTIIRNALAGSEIPIYGDGQNIRDWLFVQDHCKAIDKVF 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G+ +NIGG NE+ NI++ I +LD PK S+ E I F++DR GHDRRYAID Sbjct: 244 HSSYFGQSFNIGGENEQSNIELAQIICEMLDKKCPKERSYKEQITFVQDRAGHDRRYAID 303 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL 325 SSK+ G+ P + + L++T+ +Y+ Sbjct: 304 SSKMTRLFGFKPSD-FYTNLSQTIDFYI 330 >gi|317482612|ref|ZP_07941627.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium sp. 12_1_47BFAA] gi|316916034|gb|EFV37441.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium sp. 12_1_47BFAA] Length = 340 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 211/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+ + + V V+D LTYAGNL +++ I + F+ +ICD Sbjct: 11 VIVTGGCGFIGSNFVHYVYDHHPDVHVTVLDALTYAGNLENIRGI-LGDRVEFVHGNICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 AELLDKLVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY+PSSPYS+TKASSD LV AW T+GI Sbjct: 119 -KYDVRYHHVSTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKASSDLLVRAWHRTFGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG+G+NVRDW++ +DH ++ +L Sbjct: 178 ATISNCSNNYGPYQHVEKFIPRQITNILEGLKPKLYGNGENVRDWIHTDDHSTGVWAILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG + ER NI ++ +I ++ P + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGADGERNNITVLRDILTVM-GKSPDDFD------WVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + + GL +T+ WY +N WW P Sbjct: 291 TKLRTELGWEPTHTDFQKGLERTIEWYTENRAWWEP 326 >gi|289704884|ref|ZP_06501301.1| dTDP-glucose 4,6-dehydratase [Micrococcus luteus SK58] gi|289558380|gb|EFD51654.1| dTDP-glucose 4,6-dehydratase [Micrococcus luteus SK58] Length = 331 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 161/338 (47%), Positives = 208/338 (61%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M L+VTGGAGFIGS ++V + V+V+DKLTYAGN +L + + + L+V DI Sbjct: 1 MHLLVTGGAGFIGSNFVHHVVRETGHDVVVLDKLTYAGNRENLAGLPEDRVT--LEVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + E DA+V++AAESH D S+ FI TNI+GTF+LLE R Sbjct: 59 CDTALVDRLVAE--SDAVVHYAAESHNDNSLNDPSPFIQTNIVGTFVLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF +STDEVYG L D F+E PYNPSSPYSA+KA SD+LV AW ++G Sbjct: 110 ---KHGKRFHHVSTDEVYGDLELDDPAKFTETTPYNPSSPYSASKAGSDHLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGPY EK IP IT +I+G LYG G NVRDW++ EDH A+ + Sbjct: 167 VQATLSNCSNNYGPYQHIEKFIPRQITNLIDGVRPRLYGQGVNVRDWIHTEDHSSAVLRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++G IG Y IG + ER N +IV EI L Y + DRPGHD RYAI Sbjct: 227 LERGEIGRTYLIGSDGERNNREIV-EILLELFDRPADDYD------LVADRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++ +++E+GW PQ ++ +GL TV WY +N WWRP Sbjct: 280 DNTALRTELGWEPQFTDIRAGLADTVRWYRENEAWWRP 317 >gi|309802209|ref|ZP_07696317.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium JCVIHMP022] gi|308221092|gb|EFO77396.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium JCVIHMP022] Length = 350 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 156/335 (46%), Positives = 210/335 (62%), Gaps = 27/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 21 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 80 ADLLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVR--------- 128 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 129 -KYGIRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLR 187 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH ++ +L Sbjct: 188 TTISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILT 247 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAID 297 KGR+GE Y IG N E+ NI ++ +I K +E +++DRPGHDRRYAID Sbjct: 248 KGRVGETYLIGANGEKNNITVL--------RMILKMMGQSEDAFDWVKDRPGHDRRYAID 299 Query: 298 SSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 S+K+++E+GW P + ESGL++T+ WY +N WW Sbjct: 300 STKLQTELGWTPTHTDFESGLSQTIDWYTENRQWW 334 >gi|325959810|ref|YP_004291276.1| dTDP-glucose 4,6-dehydratase [Methanobacterium sp. AL-21] gi|325331242|gb|ADZ10304.1| dTDP-glucose 4,6-dehydratase [Methanobacterium sp. AL-21] Length = 312 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 214/333 (64%), Gaps = 23/333 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIG +V ++V DKLTYA N L ++ F++ DI Sbjct: 1 MKMLITGGAGFIGCNFVHQMVEKYDHDLVVFDKLTYAANPKYLDDVKDK--IEFVKGDIG 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +++ +K+ D +VNFAAE+HVDRSI F+ T++IGT+ LLE R Sbjct: 59 DAEAVKNVMKDC--DYVVNFAAETHVDRSIEDPGVFVKTDVIGTYNLLENVR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D R+LQISTDEVYGS++ G F+E +PSSPYSA+KA +D LV A+ TYG PVL Sbjct: 109 -KYDVERYLQISTDEVYGSIENGSFTELSNIDPSSPYSASKAGADVLVSAYYKTYGAPVL 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNN+GPY FPEKLIPL I ++ + +YGDG+NVRDW+Y D+ R +Y L KG Sbjct: 168 ITRSSNNFGPYQFPEKLIPLFILNAMQDKQLPVYGDGKNVRDWIYAPDNCRGVYTALMKG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 ++GE YN+GG NE+ N++I LI ++ +E LI F+EDR GHDRRY++DS+ Sbjct: 228 KLGEVYNVGGGNEKNNLEIT--------KLILENLGKSEDLITFVEDRLGHDRRYSLDST 279 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK ++GW P+ E + T+ WY +N +R Sbjct: 280 KIK-KLGWKPEVKFEDAIKATIDWYKENISIFR 311 >gi|292670158|ref|ZP_06603584.1| dTDP-glucose 4,6-dehydratase [Selenomonas noxia ATCC 43541] gi|292648110|gb|EFF66082.1| dTDP-glucose 4,6-dehydratase [Selenomonas noxia ATCC 43541] Length = 335 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 160/339 (47%), Positives = 221/339 (65%), Gaps = 21/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIG+ Y L + Q++ D LTYAGNL +L + + FSF++ DI Sbjct: 1 MKIIVTGGAGFIGANFIYYELRTHPEDQIICYDALTYAGNLATLDAAKEYSQFSFVRGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + + + QPD IVNFAAESHVDRSI + F+ TNIIGT +LL+ R Sbjct: 61 ADRRAVYTTFECTQPDIIVNFAAESHVDRSIENPEIFLQTNIIGTSVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG----LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L LF+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGIQRYHQVSTDEVYGDLPLNRTDLLFTEETPLHASSPYSSSKASADLLVQAYARTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P+ +S CSNNYG + FPEKLIPL I R ++G+ + +YGDG NVRDWL+V+DH A+ Sbjct: 172 DLPITISRCSNNYGAFQFPEKLIPLMIIRAMQGAKLPVYGDGLNVRDWLHVDDHCAAIDS 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++++G++GE YN+GG+NER NI++V I L AL E I ++ DR GHDRRYA Sbjct: 232 IVRRGQLGEVYNVGGHNERSNIEVVRTI---LHALGRSE----EQISYVADRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID +K++ E+GW P G+ T+ WY ++ WW+ + Sbjct: 285 IDPAKMERELGWKPTTTFADGIQSTITWYREHETWWKDI 323 >gi|163847866|ref|YP_001635910.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525739|ref|YP_002570210.1| dTDP-glucose 4,6-dehydratase [Chloroflexus sp. Y-400-fl] gi|163669155|gb|ABY35521.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222449618|gb|ACM53884.1| dTDP-glucose 4,6-dehydratase [Chloroflexus sp. Y-400-fl] Length = 337 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 216/334 (64%), Gaps = 19/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y++ +++V DKLTYAGNL +L ++ F+F+Q DICD Sbjct: 4 LLVTGGAGFIGSNFVHYMLGKYDDYRIVVYDKLTYAGNLANLAPVANDPRFAFVQGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R A++ + D IVNFAAE+HVDRSI+ D + TN+ GT+ LLE R + Sbjct: 64 IDAVRQAVRSYNIDTIVNFAAETHVDRSIMAPDAVVRTNVNGTWALLEVAREF------- 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF QISTDEVYG++ S E P P SPYSA+KA +++LV A+ TYG+P+ Sbjct: 117 --QLERFHQISTDEVYGAIPAPRRSREGDPLEPRSPYSASKAGAEHLVYAYYITYGVPMT 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNN GPYH+PEK +PL T I+ + +YGDG VRD+ YV DH A+ LVL KG Sbjct: 175 ITRGSNNIGPYHYPEKAVPLFTTNAIDNLPLPIYGDGLQVRDYQYVLDHCEAIDLVLHKG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +IGE YN+G E NI++ +I LD ++ K YS LI+ + DR GHDRRYA+D SK Sbjct: 235 QIGEVYNVGTEVETPNIEMARKI---LD-ILGKPYS---LIQHVTDRAGHDRRYALDCSK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +GW + + L KTV W+++N WWRP+ Sbjct: 288 LRA-LGWRSRHTFDEALEKTVRWFVENEAWWRPI 320 >gi|157694177|ref|YP_001488639.1| spore coat polysaccharide biosynthesis protein SpsJ [Bacillus pumilus SAFR-032] gi|157682935|gb|ABV64079.1| spore coat polysaccharide biosynthesis protein SpsJ [Bacillus pumilus SAFR-032] Length = 321 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 208/323 (64%), Gaps = 19/323 (5%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + L+ + +++ V DKLTYA + + E+ + + F F+Q DI + Sbjct: 6 LITGGAGFIGLNFVKLLLQETDVRLTVFDKLTYASHPEEMDELLKLSHFRFIQGDITLQH 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A E DAI++FAAESHVDRSI A+ FI TN++GT+ +LE + L K Sbjct: 66 ELDQAFDEVY-DAIIHFAAESHVDRSIESAEPFIQTNVLGTYRMLE------AVLKGKAK 118 Query: 124 DQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ISTDEVYG LD F+E P +P++PYSA+KASSD LV ++ HT+ +P ++ Sbjct: 119 ---KLIHISTDEVYGDLELDDSAFTEQTPLSPNNPYSASKASSDLLVKSYIHTHQLPAMI 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EKLIP I + I G + +YGDGQ +RDWLYVEDH +A+ VL+ G Sbjct: 176 TRCSNNYGPYQHEEKLIPTIIRKAINGEKIPIYGDGQQIRDWLYVEDHAKAVKQVLENGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G+ YNIGG NE+ N+D+ I L SH + I F+EDR GHDRRYAID+SK+ Sbjct: 236 AGQVYNIGGGNEKTNLDLTKTI------LTQLGISH-DRIAFVEDRKGHDRRYAIDASKL 288 Query: 302 KSEIGWFPQENMESGLNKTVCWY 324 K +GW + E+G+ KT+ WY Sbjct: 289 KRGLGWTQLTSFEAGIEKTINWY 311 >gi|302539099|ref|ZP_07291441.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. C] gi|302447994|gb|EFL19810.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. C] Length = 328 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 210/341 (61%), Gaps = 21/341 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 L+VTGGAGFIGS R L+ + V V+D LTYAGN +L + F+ DI Sbjct: 5 LLVTGGAGFIGSHYVRTLLGPDGPPDVVVTVLDALTYAGNPANLAAVRDHPRHRFVHGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + + D +V+FAAESHVDRS+L A F+ TN+ GT +LL+ Sbjct: 65 CDADLVDRVMA--GQDQVVHFAAESHVDRSLLDASAFVRTNVHGTQVLLDAAL------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+Q+STDEVYGS++ G ++ED P P+SPYSA+KAS+D L LA ++G+ V Sbjct: 116 --RHGAAPFVQVSTDEVYGSVEHGSWTEDEPLRPNSPYSASKASADLLALAHHVSHGLDV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGP+ FPEKL+P +T +++G LYGDG +VR+WL+V+DHVR + V + Sbjct: 174 RVTRCSNNYGPHQFPEKLVPRFVTLLMDGHRAPLYGDGLHVREWLHVDDHVRGIEAVRTR 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR G YNIGG N ++V G LLDA +S E +EDR GHDRRY++DS+ Sbjct: 234 GRAGRVYNIGGGTTLSNRELV---GLLLDA-CGADWSRVE---HVEDRKGHDRRYSVDST 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +++ E+G+ P + SGL TV WY D+ WW PL P Sbjct: 287 RVQRELGFRPATPLASGLAATVAWYRDHRSWWEPLLPARSP 327 >gi|77864465|gb|ABB05098.1| LipDig2 [Streptomyces aureofaciens] Length = 322 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 150/340 (44%), Positives = 211/340 (62%), Gaps = 26/340 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR +VTG AGFIGSA R + ++++ D LTYAGN +L ++ F+F+ Sbjct: 1 MRALVTGAAGFIGSAFVRSSLTQPGSAFPEMEITAFDALTYAGNTENLSSVADDPRFTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D + + L D ++NFAAE+HVDRSI G F+ TN++GT LLE R Sbjct: 61 RGDIADGKLLAEVLPGH--DIVLNFAAETHVDRSIEGPSVFVRTNVLGTHTLLEAAR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+QISTDEVYGS+D G ++E+ P+SPY+A KA +D+L LA+ TY Sbjct: 116 ------RAGVERFVQISTDEVYGSIDTGSWTEESALCPNSPYAAAKAGADHLALAYARTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ FPEK+IP +T ++EG V LYGDG NVRDWL+V+DH + L Sbjct: 170 GMHVCITRCSNNYGPHQFPEKVIPRFVTLLMEGHRVPLYGDGGNVRDWLHVDDHCAGIRL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH-TELIRFIEDRPGHDRRY 294 VL+KG+ GE Y+IGG E N + L L+ + + H + + + DR GHDRRY Sbjct: 230 VLEKGKPGEVYHIGGGTELTNAE--------LARLLLEEFGHGADRVERVPDRLGHDRRY 281 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++D SK+++ +G+ P GL TV WY +N WW+PL Sbjct: 282 SLDDSKLRA-LGYRPGVPFAEGLRATVAWYRENTSWWKPL 320 >gi|330873321|gb|EGH07470.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 282 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 139/260 (53%), Positives = 178/260 (68%), Gaps = 15/260 (5%) Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL--DKG 143 +DRSI G + F+ TN++GTF LLE R +W+ L K FRFL +STDEVYG+L + Sbjct: 1 MDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATDKAAFRFLHVSTDEVYGTLGANDP 60 Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT 203 F+E PY P+SPYSA+KA+SD LV ++ HTYG+PVL +NCSNNYGP+HFPEKLIPL I Sbjct: 61 AFTETTPYMPNSPYSASKAASDRLVRSYHHTYGMPVLTTNCSNNYGPFHFPEKLIPLMIV 120 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 + G + +YGDGQ +RDWLYVEDH + VL+ G +GE YNIGG NE+ NIDIV + Sbjct: 121 NALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAGALGETYNIGGWNEKANIDIVHTL 180 Query: 264 GFLLDALIPKSY-------------SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 LLD L P + ++ ELI ++ DRPGHDRRYAID+ KI+ E+GW P Sbjct: 181 CALLDELAPAAARQVINQKTGEPVSNYAELITYVTDRPGHDRRYAIDARKIERELGWKPA 240 Query: 311 ENMESGLNKTVCWYLDNNWW 330 E ++G+ KTV WYL N W Sbjct: 241 ETFDTGIRKTVEWYLTNQKW 260 >gi|213693237|ref|YP_002323823.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524698|gb|ACJ53445.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 341 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 205/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + + V+DKLTYAGN ++ + S + + DICD Sbjct: 12 ILVTGGCGFIGANFVRYVARNHPHVHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 71 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+ED PY+PSSPYSA+KASSD+LV AW TYG+ Sbjct: 120 -KHDVRFHHISTDEVYGDLALDDPARFTEDTPYHPSSPYSASKASSDHLVRAWVRTYGLR 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 179 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ + ++ DRPGHDRRYAID+ Sbjct: 239 RGRIGETYLIGADGEMSNIAVLRMILRLMG-------QPEDAFDWVRDRPGHDRRYAIDA 291 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + GL + WY ++ WW P Sbjct: 292 SKLRAELGWSPMHTDFAGGLRNVIDWYAEHRDWWAP 327 >gi|41386583|dbj|BAD08356.1| dTDP-glucose 4,6-dehydratase [Streptomyces halstedii] Length = 323 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 160/334 (47%), Positives = 210/334 (62%), Gaps = 22/334 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 RL+VTG AGFIGSA R L+ D ++V V+D LTYAGN +L S ++ DI Sbjct: 3 TRLLVTGAAGFIGSAYVRGLLTDQPDLRVTVLDSLTYAGNRANLDLTHPS--LDLVEGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + E D IV+FAAESHVDRSI G+ EFI TN++GT LL+ Sbjct: 61 CDTELVDRLTAE--ADQIVHFAAESHVDRSITGSAEFIRTNVLGTHTLLDAAL------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ ISTDEVYGS++KG + E P P+SPYSA+KASSD L LA+ T+G+ V Sbjct: 112 --RHGIDRFVHISTDEVYGSIEKGSWPETDPLRPNSPYSASKASSDLLALAYHRTHGLDV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGPY PEK+IPL +T +++G V LYGDGQNVRDWL+VEDH A+ V + Sbjct: 170 RVTRCSNNYGPYQHPEKVIPLFVTNLLDGKRVPLYGDGQNVRDWLHVEDHCAAIECVRTR 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG E N ++ G LL+A S + ++ DR GHD RY++D S Sbjct: 230 GGAGEIYNIGGGTELSNRELT---GLLLEACGADWDS----VEYVTDRKGHDLRYSVDWS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 K+ +++G+ P + +GL +TV WY N WW P Sbjct: 283 KV-ADLGYTPAHDFRAGLAETVDWYRSNRTWWEP 315 >gi|311113105|ref|YP_003984327.1| dTDP-glucose 4,6-dehydratase [Rothia dentocariosa ATCC 17931] gi|310944599|gb|ADP40893.1| dTDP-glucose 4,6-dehydratase [Rothia dentocariosa ATCC 17931] Length = 332 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 207/342 (60%), Gaps = 24/342 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS YL+++ + V V+DK+TYA N SL + + F+ + DI D Sbjct: 3 HLLVTGGAGFIGSNFVHYLLDNTEHTVTVLDKMTYAANKTSLNGLDGTR-FNLMVGDIAD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + Q DA++++AAESH D S+ + FI TN++GTF LLE R Sbjct: 62 RELTDELVA--QADAVIHYAAESHNDNSLANPEPFIHTNLVGTFTLLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R+ ISTDEV+G L D F+E PYNPSSPYS+TKA SD LV AW ++GI Sbjct: 111 -RHGTRYHHISTDEVFGDLALEDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIE 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG+G NVRDW++ DH A+ +L+ Sbjct: 170 ATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+IGE Y IG + E NI ++ I L+ + H + DRPGHD RYAID Sbjct: 230 SGKIGETYLIGADGEENNITVLRTILRLM-GKDENDFEH------VIDRPGHDMRYAIDG 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++++ E+GW PQ + E+GL T+ WY DN WW PL E++ Sbjct: 283 TRLREELGWEPQFTDFEAGLADTIAWYTDNRSWWEPLKAEVE 324 >gi|292659134|gb|ADE34516.1| SsfS2 [Streptomyces sp. SF2575] Length = 327 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 210/335 (62%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS R L+ + V V+DKLTYAGN +L E+ FSF+ DI Sbjct: 5 ILVTGGAGFIGSHYVRTLLGPGGPGDVSVTVLDKLTYAGNPANLDEVRGHPGFSFVHGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + E Q +V+FAAE+HVDRSI G F+ TN+ GT L++ + Sbjct: 65 LDGALADKLMAEHQ--HVVHFAAETHVDRSIDGGARFVHTNVSGTHTLVD---------A 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+ +STDEVYGS++ G + E P P+SPY+A+KASSD + L++ T+G+ V Sbjct: 114 AHRAGVATFVHVSTDEVYGSIESGSWPETHPLAPNSPYAASKASSDLVALSYHRTHGLDV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYG +HFPEKLIPL +T +++G V LYGDGQ+VRDWL+++DHVR + LV Sbjct: 174 RVTRCSNNYGHHHFPEKLIPLFVTNLLDGRSVPLYGDGQHVRDWLHIDDHVRGIELVRTA 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG E N + G LL+A + + + + DR GHDRRY++D Sbjct: 234 GRAGEVYNIGGGTELSNEQLT---GLLLEAC----GAGWDRVTRVADRKGHDRRYSVDCG 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI+ E+G+ P ++ +GL +TV WY D+ WW PL Sbjct: 287 KIRGELGYAPGKDFATGLAETVRWYRDHRDWWEPL 321 >gi|145294462|ref|YP_001137283.1| hypothetical protein cgR_0417 [Corynebacterium glutamicum R] gi|140844382|dbj|BAF53381.1| hypothetical protein [Corynebacterium glutamicum R] Length = 339 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 157/340 (46%), Positives = 208/340 (61%), Gaps = 29/340 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTGGAGFIG+ R V + V+DKLTYAGN ++LK + S + + ++ DIC Sbjct: 4 LLVTGGAGFIGANFVRQTVEQHPEYTHITVLDKLTYAGNADNLKGLPDSKV-TLIEGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S +K+ D ++FAAESH D S+ F+ TN+IGTF+LLE R Sbjct: 63 DAELVDSLVKDH--DITIHFAAESHNDNSLNDPSPFVHTNLIGTFVLLEAVR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF ISTDEV+G L D F+E Y PSSPYSATKA SD+LV AW ++GI Sbjct: 113 --KHNKRFHHISTDEVFGDLELDDPNRFTETTAYKPSSPYSATKAGSDHLVHAWIRSFGI 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++L+L Sbjct: 171 QATMSNCSNNYGPYQHIEKFIPRQITNILAGLTPKLYGTGEQVRDWIHVDDHNDAVHLIL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+IGE Y IG +N+ N V E+ L L +Y H + DRPGHD RYA+D Sbjct: 231 SKGKIGETYIIGADNDHVNNKQVIELICELMGLDKNAYEH------VADRPGHDMRYAMD 284 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWR 332 S+K+++E+GW P+ M GL +T+ WY +N WWR Sbjct: 285 STKLRTELGWAPKYTDVDSGMRKGLEQTIDWYRENEAWWR 324 >gi|311063501|ref|YP_003970226.1| RmlB dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum PRL2010] gi|310865820|gb|ADP35189.1| RmlB dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum PRL2010] Length = 341 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 207/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + V+DKLTYAGN ++ + S + + DICD Sbjct: 12 ILVTGGCGFIGANFVRYVARNHPHAHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 71 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+ED PY PSSPYSA+KASSD+LV AW TYG+ Sbjct: 120 -QHDVRFHHISTDEVYGDLALDDPARFTEDTPYRPSSPYSASKASSDHLVRAWVRTYGLR 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 179 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ P+ + ++ DRPGHDRRYAID+ Sbjct: 239 RGRIGETYLIGADGEMSNITVLRMILQLMGQ--PE-----DAFDWVRDRPGHDRRYAIDA 291 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + SGL + WY+++ WW P Sbjct: 292 SKLRAELGWSPMHTDFASGLRNVIDWYVEHRDWWAP 327 >gi|3256059|emb|CAA07387.1| StrE [Streptomyces glaucescens] Length = 329 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 205/342 (59%), Gaps = 22/342 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 RL+VTGGAGFIGS R L+ V V+D L+YAGNL +L + F+ D Sbjct: 4 RLLVTGGAGFIGSHYVRTLLGPDGPPDAVVTVLDALSYAGNLANLDPVRDHPPVRFVHGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD + +R + D +V+ AAESHVDRS+L A F+ TN GT LL+ Sbjct: 64 ICDADLVRVMAGQ---DQVVHLAAESHVDRSLLDAAAFVRTNAGGTQTLLDAAL------ 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F+Q+STDEVYGSL+ G ++ED P+SPY+A+KAS D L LA ++G+ Sbjct: 115 ---RHGVAPFVQVSTDEVYGSLETGSWTEDEAVRPNSPYAASKASGDLLALAMHVSHGLD 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGPY FPEKL+P +T ++EG V LYGDG +VRDWL+V+DHVR + V Sbjct: 172 VRITRCSNNYGPYQFPEKLVPRFVTLLLEGRKVPLYGDGLHVRDWLHVDDHVRGIEAVRA 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR G YNIGG N D+V D L+ + + + + DR GHDRRY++D+ Sbjct: 232 RGRAGRVYNIGGGTSLANRDLV-------DLLLKACGAGWDRVEHVPDRKGHDRRYSVDA 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S+I+ E+G P ++ +GL TV WY DN WW PL P Sbjct: 285 SRIRRELGHVPATDLSTGLAATVAWYRDNRAWWEPLCAGRAP 326 >gi|325002443|ref|ZP_08123555.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia sp. P1] Length = 321 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 147/339 (43%), Positives = 213/339 (62%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCR-----YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R +++V+D TYAG + +L ++ + + Sbjct: 1 MRVVVTGGAGFIGSHFVRSAAAGAYPALAGAEIVVLDAFTYAGRIENLAPVA--DRVTVE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D + + L D +V+ AAE+HVDRSI GA +F+TTN++GT +LL+ Sbjct: 59 RGDVRDPQRVAGVLT--GADLVVHLAAETHVDRSITGAADFVTTNVVGTQVLLQ------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+++G + E P P+SPYSA KA SD L ++ T+ Sbjct: 111 ---AALDRGVGRFVHVSTDEVYGSIEQGSWPESHPLEPNSPYSAAKAGSDLLARSYHRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYGPY FPEKLIPL +TR+++G V LYGDG NVRDWL+V+DH R + L Sbjct: 168 GLDVVVTRCSNNYGPYQFPEKLIPLFVTRLLDGRRVPLYGDGLNVRDWLHVDDHCRGIAL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V +KGR GE YNIGG E N D L L+ + ++I ++DR GHDRRY+ Sbjct: 228 VAEKGRAGEVYNIGGGTELTNAD-------LTRRLLAAVGAGEDMIENVDDRKGHDRRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D S+I+ E+G+ P+ + GL +TV WY D+ WW + Sbjct: 281 VDWSRIRDELGYTPRWTFDEGLAETVAWYRDHRSWWEAV 319 >gi|6478779|gb|AAF13998.1|AF201913_1 SgcA [Streptomyces globisporus] gi|24575100|gb|AAL06671.1| dNTP-glucose dehydratase [Streptomyces globisporus] Length = 332 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 151/339 (44%), Positives = 209/339 (61%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-----LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L +V V+DKLTY+GN +L ++ ++F+ Sbjct: 1 MRMLVTGGAGFIGSQFVRATLHGELPGSEDARVTVLDKLTYSGNPANLTSVAAHPRYTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D D + + D IV+FAAESHVDRSI A F+TTN++GT LLE Sbjct: 61 QGDTVDPRVVDEVVAGH--DVIVHFAAESHVDRSIDTATRFVTTNVLGTQTLLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+ G ++ED P P+ PY+A+KA SD + LAW T Sbjct: 113 ---AALRHGVGRFVHVSTDEVYGSIASGSWTEDTPLAPNVPYAASKAGSDLMALAWHRTR 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ C+NNYGPY +PEK+IPL +T +++G V LYGDG + RDWL+V DH RA+ + Sbjct: 170 GLDVVVTRCTNNYGPYQYPEKVIPLFVTNILDGLRVPLYGDGAHRRDWLHVSDHCRAIQM 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V+ GR GE Y+IGG E N ++ G LL A + + + DR GHDRRY+ Sbjct: 230 VMNSGRAGEVYHIGGGTELSNEELT---GLLLTA----CGTDWSCVDRVADRQGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +KI+ E+G+ P E GL TV WY +N WW+PL Sbjct: 283 LDITKIRQELGYEPLVAFEDGLAATVKWYHENRSWWQPL 321 >gi|288549270|gb|ADC52830.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces platensis] Length = 368 Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 153/335 (45%), Positives = 208/335 (62%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 L+VTGGAGFIGS R L+ + V V+D LTYAGN +L + F F+Q DI Sbjct: 44 LLVTGGAGFIGSRYVRALLGPDGPPDVVVTVLDALTYAGNPANLSVVRDHPRFRFVQGDI 103 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + + D +V+FAAESHVDRS+L A F+ TN+ GT LL+ R Sbjct: 104 CDAAVVDRVMAD--QDQVVHFAAESHVDRSLLDASAFVQTNVHGTQTLLDAAR------- 154 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+Q+STDEVYGS++ G ++ED P PSSPYSA+KAS++ L LA ++G+ V Sbjct: 155 --RHGVAPFVQVSTDEVYGSIEHGSWTEDEPLRPSSPYSASKASAELLALAHHVSHGLDV 212 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGP+ FPEKLIP IT +++G V LYGDG +VR+WL+V+DHVR + V + Sbjct: 213 RVTRCSNNYGPHQFPEKLIPRFITLLMDGHRVPLYGDGLHVREWLHVDDHVRGIEAVRTR 272 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR G YNIGG N ++V G LL+A S + +EDR GHDRRY++DS+ Sbjct: 273 GRTGRVYNIGGGAALSNKELV---GLLLEACGADWSS----VEQVEDRKGHDRRYSVDST 325 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+ + P + GL TV WY + WW PL Sbjct: 326 RIQRELDFVPTTGLADGLAATVAWYRAHRSWWEPL 360 >gi|326332006|ref|ZP_08198291.1| dTDP-glucose 4,6-dehydratase [Nocardioidaceae bacterium Broad-1] gi|325950144|gb|EGD42199.1| dTDP-glucose 4,6-dehydratase [Nocardioidaceae bacterium Broad-1] Length = 327 Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 151/339 (44%), Positives = 208/339 (61%), Gaps = 24/339 (7%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGS +LV + V V+DKLTYA + SL + + + + DI D Sbjct: 1 MTGGAGFIGSNFVHHLVANTDAYVTVLDKLTYASSEASLAGLPEDRV-KLVVGDIADAAV 59 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + + DA+V++AAESH D S+ F+ TNI+GTF+LLE R + Sbjct: 60 VEPLVA--GSDAVVHYAAESHNDNSLSDPAPFVQTNIVGTFVLLEAVR----------RH 107 Query: 125 QFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF +STDEVYG LD F+ED PY PSSPYSATKA SD+LV AW ++G+ + Sbjct: 108 DVRFHHVSTDEVYGDLDLDDPKRFTEDTPYQPSSPYSATKAGSDHLVRAWVRSFGVRATI 167 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 SNCSNNYGP+ EK IP IT +IEG +YGDG NVRDW++ +DH A++ +L+KGR Sbjct: 168 SNCSNNYGPWQHVEKFIPRQITEVIEGRRPRVYGDGLNVRDWIHTDDHSSAVWTILEKGR 227 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 IG+ Y IG + E+ N+D+V A++ + I ++ DR GHDRRYAI+S K+ Sbjct: 228 IGQTYLIGADGEKSNVDVV-------RAILRHFGKPEDDIEWVTDRAGHDRRYAIESGKL 280 Query: 302 KSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +SE+GW P+ ++ + GL T+ WY +N WW PL E + Sbjct: 281 RSELGWEPKYQDFDKGLAATIAWYQENEAWWSPLKHETE 319 >gi|154488288|ref|ZP_02029405.1| hypothetical protein BIFADO_01862 [Bifidobacterium adolescentis L2-32] gi|154083439|gb|EDN82484.1| hypothetical protein BIFADO_01862 [Bifidobacterium adolescentis L2-32] Length = 340 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 153/336 (45%), Positives = 209/336 (62%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+V+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 11 IIVTGGCGFIGSNFVHYVVDHHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 70 ADLLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYGI Sbjct: 119 -KYDIRYHHVSTDEVYGDLALDDPARFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIR 177 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGP+ EK IP IT +++G LYG G+NVRDW++ EDH ++ +L Sbjct: 178 ATISNCSNNYGPFQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILT 237 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG + E+ NI ++ I ++ + +++DRPGHDRRYAIDS Sbjct: 238 KGRIGETYLIGADGEQNNITVLRMILRMMG-------QSEDAFDWVKDRPGHDRRYAIDS 290 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P+ + ESGL +T+ WY +N WW P Sbjct: 291 TKLRTELGWTPKHTDFESGLAQTIEWYTENRAWWEP 326 >gi|325295549|ref|YP_004282063.1| dTDP-glucose 4,6-dehydratase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065997|gb|ADY74004.1| dTDP-glucose 4,6-dehydratase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 329 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 159/351 (45%), Positives = 222/351 (63%), Gaps = 25/351 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGS R V + ++ +V+DKLTYAG+L LKE+ N SF + DI Sbjct: 1 MKLVVTGGAGFIGSEFVRQAV-EKGLETVVVDKLTYAGDLERLKEVE--NKISFYKADIT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE I K +PD +V++AAESHVDRSIL A FI TN+ GT ILL+ + L Sbjct: 58 NREFIEHIFKAEKPDVVVHWAAESHVDRSILDATPFIETNVKGTQILLDVAKETGVNL-- 115 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F+ I+TDEVYG L + G F ED P NP+SPYS +KAS+D L A+ TYG+PV Sbjct: 116 -------FVNIATDEVYGELGEDGQFYEDTPLNPNSPYSVSKASADMLGRAYYRTYGLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYG + +PEKLIP+ I + + + +YG G+N R+WL+V D A++ +++K Sbjct: 169 ITVRPSNNYGYWQYPEKLIPVVILKALNNEPIPIYGTGENRREWLFVSDCAEAVFEIIEK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YN+G ER+NID+V I +L+ +LI F++DRPGHD RY++++ Sbjct: 229 GKPGEIYNVGSGEERRNIDVVKSILQILN-------KPEDLITFVKDRPGHDFRYSLNTE 281 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNL 350 KI+ E+ W + E G+ KTV WYL N W + +EL +DY WK + Sbjct: 282 KIEKELSWKAKVKFEEGIEKTVKWYLKNLDWAKRKAEEL---HDY--WKKV 327 >gi|224283995|ref|ZP_03647317.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum NCIMB 41171] Length = 345 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 206/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + V+DKLTYAGN ++ + S + + DICD Sbjct: 16 ILVTGGCGFIGANFVRYVARNHPHAHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 75 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 123 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+ED PY PSSPYSA+KASSD+LV AW TYG+ Sbjct: 124 -QHDVRFHHISTDEVYGDLALDDPARFTEDTPYRPSSPYSASKASSDHLVRAWVRTYGLR 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 183 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ P+ + ++ DRPGHDRRYAID+ Sbjct: 243 RGRIGETYLIGADGEMSNIAVLRMILQLMGQ--PE-----DAFDWVHDRPGHDRRYAIDA 295 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + SGL + WY ++ WW P Sbjct: 296 SKLRAELGWSPMHTDFASGLRNVIDWYAEHRDWWAP 331 >gi|313141146|ref|ZP_07803339.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] gi|313133656|gb|EFR51273.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] Length = 341 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 206/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + V+DKLTYAGN ++ + S + + DICD Sbjct: 12 ILVTGGCGFIGANFVRYVARNHPHAHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 71 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+ED PY PSSPYSA+KASSD+LV AW TYG+ Sbjct: 120 -QHDVRFHHISTDEVYGDLALDDPARFTEDTPYRPSSPYSASKASSDHLVRAWVRTYGLR 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 179 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ P+ + ++ DRPGHDRRYAID+ Sbjct: 239 RGRIGETYLIGADGEMSNIAVLRMILQLMGQ--PE-----DAFDWVHDRPGHDRRYAIDA 291 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 SK+++E+GW P + SGL + WY ++ WW P Sbjct: 292 SKLRAELGWSPMHTDFASGLRNVIDWYAEHRDWWAP 327 >gi|21219273|ref|NP_625052.1| dehydratase [Streptomyces coelicolor A3(2)] gi|256789691|ref|ZP_05528122.1| dehydratase [Streptomyces lividans TK24] gi|289773581|ref|ZP_06532959.1| dTDP-glucose 4,6-dehydratase [Streptomyces lividans TK24] gi|6468257|emb|CAB61555.1| putative dehydratase [Streptomyces coelicolor A3(2)] gi|289703780|gb|EFD71209.1| dTDP-glucose 4,6-dehydratase [Streptomyces lividans TK24] Length = 324 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 157/340 (46%), Positives = 212/340 (62%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M ++VTG AGFIGS R L +D +V V+D LTYAG+ +L E+ L F+ Sbjct: 1 MNILVTGAAGFIGSRYVRGLLASDAPGAPRVTVLDALTYAGSTANL-ELGHPRL-EFVHG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + D +V+FAAESHVDRSI A +F+ TN++GT LL+ Sbjct: 59 DIRDAALVDRLTA--GADQVVHFAAESHVDRSIHAASDFVLTNVVGTQNLLDAAL----- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F+ +STDEVYGS+D G +E+ P PSSPYSA+KAS D L L++ T+G+ Sbjct: 112 ----RHGVGPFVHVSTDEVYGSVDAGSATEEHPLRPSSPYSASKASGDLLALSYHRTHGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGP+ FPEKL+PL +TR+++G V LYGDG+NVRDWL+V+DH R + LV Sbjct: 168 DVRVTRCSNNYGPHQFPEKLVPLFVTRLLDGHRVPLYGDGRNVRDWLHVDDHCRGVDLVR 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GR GE YNIGG E N D+ G LLDA + + I +EDR GHD RY++D Sbjct: 228 TRGRAGEVYNIGGGTELSNRDLT---GLLLDAC----GAGPDRIVHVEDRKGHDLRYSVD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 SK + E+G+ P ++ +GL +TV WY DN WW PL + Sbjct: 281 WSKAREELGYRPHRDLATGLAETVAWYRDNRAWWEPLERR 320 >gi|330468516|ref|YP_004406259.1| dTDP-glucose 4,6-dehydratase [Verrucosispora maris AB-18-032] gi|328811487|gb|AEB45659.1| dtdp-glucose 4,6-dehydratase [Verrucosispora maris AB-18-032] Length = 333 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 156/347 (44%), Positives = 212/347 (61%), Gaps = 29/347 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----------LKIQVLVIDKLTYAGNLNSLKEISQS 49 MR++VTGGAGFIGS R L+ QV V+D LTY+GN +L ++ Sbjct: 1 MRILVTGGAGFIGSEYVRMLLGAPGGSAEGVPPIQPSQVTVLDALTYSGNRANLAPVADD 60 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F+ DI E + + D IV+FAAESHVDRSI GA F+ TN++GT LL+ Sbjct: 61 PRLRFVHGDIRHAEVVDEVVA--GQDVIVHFAAESHVDRSISGAGPFVCTNVLGTQTLLD 118 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + L + RF+ +STDEVYGS+ +G ++ED P P+SPYSA+KA SD L L Sbjct: 119 ------AALRHGVR---RFVHVSTDEVYGSIAEGSWTEDWPLAPNSPYSASKAGSDLLAL 169 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ T+G+ V+++ CSNNYGPY +PEK+IPL +T +++G V LYGDG NVRDWL+V DH Sbjct: 170 AYHRTHGLDVVVTRCSNNYGPYQYPEKVIPLFVTNLLDGRTVPLYGDGGNVRDWLHVHDH 229 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 R + +V + GR GE Y+IGG E N ++ G LL A + + + + DR G Sbjct: 230 CRGVAMVQQGGRAGEVYHIGGGTELTNKELT---GRLLQAC----GADWDRVTLVADRKG 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 HDRRY++D +KI E+G+ P ++ GL TV WY DN WW PL K Sbjct: 283 HDRRYSLDINKINKELGYAPTVGLDDGLADTVDWYRDNRSWWEPLRK 329 >gi|221632263|ref|YP_002521484.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] gi|221157013|gb|ACM06140.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] Length = 344 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 19/330 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS R + V+V+DKLTYAG+L +L+E+ FL+ DI D Sbjct: 8 RILITGGAGFIGSHFVRLALAAGIPSVVVLDKLTYAGSLLNLEEVLDDPRVRFLEGDIAD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A+ DA+VNFAAE+HVDRS+L FI TN+ GT +LLE+ Sbjct: 68 PAAVAEAMAGC--DAVVNFAAETHVDRSLLEPAAFIRTNVWGTMVLLEQAL--------- 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + RFL +STDEVYG + G SED P P +PY+A+KA++++ V A+ +YG+PVL+ Sbjct: 117 RLGVGRFLHVSTDEVYGEVLSGSVSEDEPLRPRNPYAASKAAAEHFVFAYWTSYGLPVLV 176 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + N YGPY PEK IPLAIT ++ G + LYGDG + RDWLYVEDH RA++ VL +G Sbjct: 177 TRGCNTYGPYQHPEKFIPLAITNLLTGRPIPLYGDGLHERDWLYVEDHCRAIWTVLVRGE 236 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G+ YNIG R NI + + LL A P + H + DRPGHDRRYA+D S++ Sbjct: 237 PGQAYNIGAGQHRPNIAVARALVRLLGA-DPSAIVH------VADRPGHDRRYAVDWSRL 289 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++ +GW P + E GL +TV WY WW Sbjct: 290 RA-LGWRPMVDFEDGLARTVAWYRARTDWW 318 >gi|168700508|ref|ZP_02732785.1| dTDP-glucose 4,6-dehydratase [Gemmata obscuriglobus UQM 2246] Length = 337 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 147/330 (44%), Positives = 217/330 (65%), Gaps = 19/330 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS R+L+ D +Q++ D LTYAGNL +L+++ +F++ D+ Sbjct: 4 VLITGGAGFIGSNFVRHLLATDPAVQIVNFDALTYAGNLANLRDLDGHPRHTFVRGDVTS 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ +R A++ D +++FAAESHVDRSI + F+ TN++GT +LL+ R + Sbjct: 64 RDDVRGAMQRGVTD-VIHFAAESHVDRSIHDSGPFVRTNVLGTQVLLDAAREFQVS---- 118 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++Q+STDEVYGSL GLF+E+ P +P+SPYSA+KA +D LV A+ HT+G+P + Sbjct: 119 -----KYVQVSTDEVYGSLGATGLFTEETPLHPNSPYSASKAGADLLVQAYQHTFGLPAV 173 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY PEKLIPL +T ++ V +YGDGQ VRDW++V DH R + ++G Sbjct: 174 ITRCSNNYGPYQLPEKLIPLFVTNLLADQQVPVYGDGQQVRDWIHVLDHCRGVEAAWRRG 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN GG E N+D+ + LL P++ LI+++ DR GHDRRYAID +K Sbjct: 234 APGEVYNFGGRCEMANLDLTLLLLKLLGK--PET-----LIKYVADRLGHDRRYAIDCTK 286 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + E+GW PQ ++GL +T+ WY N W Sbjct: 287 AERELGWAPQVKFDAGLAETIGWYKANTAW 316 >gi|139439924|ref|ZP_01773276.1| Hypothetical protein COLAER_02314 [Collinsella aerofaciens ATCC 25986] gi|133774774|gb|EBA38594.1| Hypothetical protein COLAER_02314 [Collinsella aerofaciens ATCC 25986] Length = 339 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 157/336 (46%), Positives = 207/336 (61%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD Sbjct: 10 IIVTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 69 AGLLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVR--------- 117 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ +STDEVYG L D F+E+ PY PSSPYS+TKASSD LV AW TYG+ Sbjct: 118 -KYGIRYHHVSTDEVYGDLALDDPAKFTEETPYKPSSPYSSTKASSDMLVRAWTRTYGLR 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++ EDH A++ +L Sbjct: 177 TTISNCSNNYGPYQHVEKFIPRQITNIVDGVRPKLYGRGENVRDWIHTEDHSSAVWDILT 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGR+GE Y IG + ER NI + + +L+A+ E ++ DRPGHDRRYAIDS Sbjct: 237 KGRMGETYLIGADGERNNITV---LRMILEAM----GKDPEDFDWVADRPGHDRRYAIDS 289 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 +K++ E+GW P + GL T+ WY+ N WWRP Sbjct: 290 TKLQRELGWRPAHTDFAEGLKATIDWYVANESWWRP 325 >gi|312137742|ref|YP_004005078.1| dtdp-glucose 4,6-dehydratase rmlb [Rhodococcus equi 103S] gi|325675106|ref|ZP_08154792.1| dTDP-glucose 4,6-dehydratase [Rhodococcus equi ATCC 33707] gi|311887081|emb|CBH46390.1| dTDP-glucose 4,6-dehydratase RmlB [Rhodococcus equi 103S] gi|325554067|gb|EGD23743.1| dTDP-glucose 4,6-dehydratase [Rhodococcus equi ATCC 33707] Length = 331 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 158/338 (46%), Positives = 212/338 (62%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + ++V V+D LTYAGN SL ++ + F+ DI Sbjct: 1 MRLLVTGGAGFIGANFVHQTVAERPDVRVTVLDALTYAGNRASLDAVA--DRIDFVHGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + + DA+V+FAAESH D S+ F+ TN++GTF LL+ R Sbjct: 59 ADADTVNRLVAD--SDAVVHFAAESHNDNSLADPWPFVRTNVVGTFTLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ ISTDEVYG L D G F+E YNPSSPYS+TKASSD LV AW ++G Sbjct: 110 ---DHDVRYHHISTDEVYGDLELGDPGRFTEATAYNPSSPYSSTKASSDMLVRAWTRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I LSNCSNNYGP+ EK IP IT +++G LYG G+NVRDW++V+DH RA++ V Sbjct: 167 IRATLSNCSNNYGPFQHVEKFIPRQITNLLDGVRPKLYGQGRNVRDWIHVDDHNRAVWTV 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KGRIGE Y IG + E N + I LL+ + +S + F+ DRPGHD RYAI Sbjct: 227 LEKGRIGETYLIGADGEVDNRTV---IAMLLE-IFGRS---ADDFDFVPDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DS+++++E+GW P+ + SGL TV WY ++ WWRP Sbjct: 280 DSTRLRTELGWEPRYRDFRSGLEATVQWYREHPEWWRP 317 >gi|297162851|gb|ADI12563.1| dehydratase [Streptomyces bingchenggensis BCW-1] Length = 315 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 23/329 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-----IQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M++++TG AGFIGS L R ++ + +QV V+DKLTYAG+L++L + + F F+ Sbjct: 1 MKILITGAAGFIGSHLTRLILGPERPLGDDVQVTVLDKLTYAGSLDNLAPVRDAPGFVFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DI D + + DAIV+ AAESHVDRSI A F+ TN++GT +LL+ Sbjct: 61 QGDIADPALVDRLMPGH--DAIVHLAAESHVDRSIDSAQAFVHTNVVGTGVLLDAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS++ G +E+ PSSPYSATKASSD L L++ T+ Sbjct: 116 ------RHEISRFVHVSTDEVYGSVEFGSATEEDRLQPSSPYSATKASSDLLALSYHQTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY FPEKLIPL +T ++ G V LYGDG+NVRDWL+V+DH L Sbjct: 170 GLDVRVTRCSNNYGPYQFPEKLIPLFVTTLLRGGSVPLYGDGENVRDWLHVDDHCHGLLA 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE YNIGG E N ++ LLDA E + ++EDR GHDRRY+ Sbjct: 230 VLNGGRAGEVYNIGGGTELSNKELT---ALLLDA----CGVGWERVDWVEDRKGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +KI+ E+G+ P + +G+ TV WY Sbjct: 283 VDWNKIRRELGYRPARDFTAGIADTVAWY 311 >gi|227525071|ref|ZP_03955120.1| dTDP-glucose 4,6-dehydratase [Lactobacillus hilgardii ATCC 8290] gi|227087783|gb|EEI23095.1| dTDP-glucose 4,6-dehydratase [Lactobacillus hilgardii ATCC 8290] Length = 334 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 214/341 (62%), Gaps = 18/341 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + ++VTGGAGFIGS L+ + L+ D LTYAGNL++L +I + + F++ DI Sbjct: 8 LNILVTGGAGFIGSNFIHLLLGHRQSDRLINFDALTYAGNLDNLDDIHEGATYRFIKGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E I+ + +Q + IVNFAA+SHVDRSI+ F+ TNI G LLE R + Sbjct: 68 ADKETIKKVVSNYQINVIVNFAAQSHVDRSIIDTTPFVHTNIEGVNTLLEVAREYHLA-- 125 Query: 120 QDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+Q+STDEVYGS + F E P NPSSPY+ATKAS+D L L++ T+G P Sbjct: 126 -------KFVQVSTDEVYGSTPAQTRFDEQTPLNPSSPYAATKASADLLALSYFKTFGTP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ +NNYG Y FPEKL+PL +T + G + +YG+GQN RDWL V+D+ RA+ +V+ Sbjct: 179 VCITRSANNYGRYQFPEKLVPLMVTAALRGKKLPIYGNGQNKRDWLNVQDNCRAIEMVMS 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ G+ YNI G + N+ IV I L + P+ + F++DRP +D+ YAID Sbjct: 239 NGKPGQIYNIAGRQHKTNLQIVKIIEKQLAVIHPQ-------VTFVKDRPANDQLYAIDD 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 SKI+ E+GW P+ + E G+ + WY+ + W+PL K++K Sbjct: 292 SKIRHELGWRPEFSFEIGMGDVIDWYVIHPERWQPLLKKVK 332 >gi|16080834|ref|NP_391662.1| dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. subtilis str. 168] gi|221311747|ref|ZP_03593594.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. 168] gi|221316073|ref|ZP_03597878.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320984|ref|ZP_03602278.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. JH642] gi|221325269|ref|ZP_03606563.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. SMY] gi|730819|sp|P39630|SPSJ_BACSU RecName: Full=Spore coat polysaccharide biosynthesis protein spsJ gi|413996|emb|CAA51628.1| ipa-72d [Bacillus subtilis subsp. subtilis str. 168] gi|2636318|emb|CAB15809.1| putative dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. subtilis str. 168] gi|291486372|dbj|BAI87447.1| spore coat polysaccharide biosynthesis protein SpsJ [Bacillus subtilis subsp. natto BEST195] Length = 315 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 211/327 (64%), Gaps = 20/327 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + ++ + ++ V+DKLTYA + ++++ Q++ F F++ DI +E Sbjct: 6 LITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMEKLKQNSRFRFVKGDISVQE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I A E D +++FAAESHVDRSI A+ FITTN++GT+ RL + L K Sbjct: 66 DIDRAFDETY-DGVIHFAAESHVDRSISQAEPFITTNVMGTY------RLAEAVLKGKAK 118 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ISTDEVYG L D F+E P +P++PYSA+KASSD LVL++ T+ +P ++ Sbjct: 119 ---KLIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I +G V LYGDG +RDWL+ EDH RA+ L+L+KG Sbjct: 176 TRCSNNYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YNIGG NER N + L ++I K EL +EDR GHDRRYAI++SK+ Sbjct: 236 DGEVYNIGGGNERTNKE--------LASVILKHLGCEELFAHVEDRKGHDRRYAINASKL 287 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNN 328 K+E+GW + E G+ +T+ WY DN+ Sbjct: 288 KNELGWRQEVTFEEGIARTIQWYTDND 314 >gi|238926895|ref|ZP_04658655.1| dTDP-glucose 4,6-dehydratase [Selenomonas flueggei ATCC 43531] gi|238885427|gb|EEQ49065.1| dTDP-glucose 4,6-dehydratase [Selenomonas flueggei ATCC 43531] Length = 335 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 160/336 (47%), Positives = 217/336 (64%), Gaps = 21/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ Y L + +++ D LTYAGN+ +L + + FSF++ DI Sbjct: 1 MKIMVTGGAGFIGANFIYYELREHPEDRIICYDALTYAGNIATLNSAREYSQFSFVRDDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + S ++ PD +VNFAAESHVDRSI + F+ TNIIGT ILL+ R Sbjct: 61 ADRTAVYSFFEQEHPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSILLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ LF+E+ P + SSPYS++KAS+D LV A+ TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLLFTEETPLHTSSPYSSSKASADLLVQAYARTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYG + FPEKLIPL + R + G + +YGDG+NVRDWL+V+DH A+ + Sbjct: 172 GVPVTISRCSNNYGAFQFPEKLIPLMVIRAMRGEKLPVYGDGKNVRDWLHVDDHCAAIDV 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ G GE YN+GG+NER NID+V I + E I +I DR GHDRRYA Sbjct: 232 ILRCGADGEIYNVGGHNERSNIDVVRTI-------LASLGKGEEQISYIADRKGHDRRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ID +KI E+GW P + G+ T+ WY ++ WW Sbjct: 285 IDPTKIGRELGWHPATIFDEGIQHTITWYREHESWW 320 >gi|269986679|gb|EEZ92959.1| NAD-dependent epimerase/dehydratase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 321 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 213/331 (64%), Gaps = 23/331 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+LIVTGG GFIGS Y L K +++ +DKLTYA + ++LK++SQ+ ++F+ DI Sbjct: 1 MKLIVTGGYGFIGSNFILYWLKKHRKDEIINVDKLTYAADPDNLKDLSQNAKYTFINGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + K+ DAI+NFAAESHVD SI + FI++NI+G +LE R Sbjct: 61 ADKEFVERTFKD--ADAIINFAAESHVDNSIKNSSLFISSNIVGVHNILETVR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF QISTDEVYGSL K F+E+ YNP +PYSATKA++D+LV A+ +TY Sbjct: 112 ---KTGIRFHQISTDEVYGSLSLNSKEKFNENSKYNPRNPYSATKAAADFLVRAYYNTYK 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV +SNCSNNYG PEKLIP + + +YG+G+ +RDW++VEDH A+ L+ Sbjct: 169 LPVTISNCSNNYGINQHPEKLIPKTLLNAYLDESIPVYGNGKQIRDWIFVEDHCSAIELI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG GE Y IG N E++NID++ I L P S LI+F+EDRPGHD RYAI Sbjct: 229 IQKGVYGETYLIGENGEKRNIDVIRTI--LKTMKKPDS-----LIKFVEDRPGHDVRYAI 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 DS KI+ E+ W P+ E G+ T+ YL N Sbjct: 282 DSRKIQKELKWKPKFAFEKGIKITIEHYLKN 312 >gi|225848195|ref|YP_002728358.1| dTDP-glucose 4,6-dehydratase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644398|gb|ACN99448.1| dTDP-glucose 4,6-dehydratase [Sulfurihydrogenibium azorense Az-Fu1] Length = 329 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 223/340 (65%), Gaps = 20/340 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGS R V +L + +V+DKLTYAG+L LKE+ F + DI Sbjct: 1 MKLLITGGAGFIGSEFTRQAVKNL-FETVVVDKLTYAGDLERLKEVEDK--IKFYKTDIN 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + ++ +PD +V+FAAESHVDRSIL FI TN+ GT ILL+ ++ + L Sbjct: 58 NQEFLDYIFQKEKPDVVVHFAAESHVDRSILDPSIFIETNVKGTQILLDISKKYNIKL-- 115 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F+ I+TDEVYG L + G F ED P P+SPYS +KAS+D L A+ TYG+PV Sbjct: 116 -------FINIATDEVYGELGENGQFYEDTPLIPNSPYSVSKASADMLGRAYYRTYGLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYG + +PEKLIP+ I + + + +YG G+N+R+WL+V D +A++ +++K Sbjct: 169 ITVRPSNNYGYWQYPEKLIPVVIIKALNNQPIPVYGKGENIREWLFVSDCAQAVFEIIQK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YN+G ER+NI++V I LD ++ K Y +LI F++DRPGHD RY++++ Sbjct: 229 GKVGEIYNVGSGQERRNIEVVKSI---LD-ILNKPY---DLITFVKDRPGHDYRYSLNTE 281 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI+ EIGW + E G+ KTV WYL+N W K+L+ Sbjct: 282 KIQREIGWKAKITFEEGIEKTVKWYLNNLEWVNKKIKQLE 321 >gi|238062665|ref|ZP_04607374.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. ATCC 39149] gi|237884476|gb|EEP73304.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. ATCC 39149] Length = 330 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 214/341 (62%), Gaps = 26/341 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 R++VTGGAGFIGS R L + + +V V+DKLTYAGNL +L+ + + +F+Q Sbjct: 4 RVLVTGGAGFIGSQYVRDLATGAYPDTAQARVTVLDKLTYAGNLANLEPVQ--DRITFVQ 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+CD + L D +VNFAAESHVDRSI + EF+ TN+ G L++ + Sbjct: 62 GDVCDTALLAEVLPGH--DVVVNFAAESHVDRSIADSAEFVRTNVQGVQTLMQ------A 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 CL R +Q+STDEVYGS+D+G ++ED P P+SPY+A KA D + LA+ T+G Sbjct: 114 CLDAGVA---RVVQVSTDEVYGSIDEGSWAEDTPLAPNSPYAAAKAGGDLIALAYARTHG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV L+ C NNYGPY FPEKLIPL +T ++ G V LYGDG NVRDW++V DH R + V Sbjct: 171 LPVCLTRCGNNYGPYQFPEKLIPLFVTELLNGRRVPLYGDGGNVRDWIHVTDHCRGIQTV 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G GE Y+I G E N+++ G LLDAL + + + + DR GHDRRY++ Sbjct: 231 VDRGVPGEVYHIAGTAELSNMELT---GRLLDAL----GAGWDRVERVPDRKGHDRRYSL 283 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 +K+++ +G+ P+ GL +T+ WY + WW PL K+ Sbjct: 284 TDAKLRA-LGYRPEVAFADGLAETIDWYRTHRDWWEPLKKQ 323 >gi|6002934|gb|AAF00211.1|AF164960_7 dNDP-glucose 4,6-dehydratase [Streptomyces fradiae] Length = 328 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/339 (44%), Positives = 215/339 (63%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M ++VTG AGFIGS R L+ D +V +DKLTYAGN N+L + F+ Sbjct: 1 MNILVTGAAGFIGSHFVRSLLADTYSGWEGARVTALDKLTYAGNRNNLP--PSNPRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CDR +R L A+V+FAAESHVDRS+ GA EF TN++GT LL+ Sbjct: 59 RGDVCDRALLRELLPGHH--AVVHFAAESHVDRSLEGAGEFFRTNVLGTQTLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L + R + +STDEVYGS+++G ++ED P P+SPY+A+KA SD + A+ Sbjct: 111 AVLDSGVE---RVVHVSTDEVYGSIEQGSWTEDWPLQPNSPYAASKACSDLVARAYCAPT 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + ++ CSNNYGP+ PEK+IP +T ++EG V LYGDG+NVR+WL+VEDH R ++L Sbjct: 168 EVDLSITRCSNNYGPHQHPEKVIPRFVTNLLEGRQVPLYGDGRNVREWLHVEDHCRGIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KG+ GE YNIGG NE N+ L + L+ + + E+IR + DR HD RY+ Sbjct: 228 VLNKGQAGEIYNIGGGNEYTNL-------ALTEKLLELTGAGPEMIRRVPDRKAHDLRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID SKI+ ++G+ P+ + E GL+ TV WY DN WW+ + Sbjct: 281 IDESKIREKLGYAPRISFEQGLSDTVAWYRDNPDWWKSI 319 >gi|283456704|ref|YP_003361268.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium Bd1] gi|283103338|gb|ADB10444.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium Bd1] Length = 328 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 207/333 (62%), Gaps = 27/333 (8%) Query: 5 VTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +TGG GFIGS Y+VN+ + V V+DKLTYAGN ++ + + + + DICD + Sbjct: 1 MTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRV-ELVVGDICDAD 59 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + DAIV++AAESH D SI + F+ TN+ GTF LLE R K Sbjct: 60 LLDRIVPGH--DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVR----------K 107 Query: 124 DQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R+ +STDEVYG L D F+E PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 108 YGIRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTT 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH ++ +L KG Sbjct: 168 ISNCSNNYGPYQHVEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILTKG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 RIGE Y IG N E+ NI ++ +I K +E +++DRPGHDRRYAIDS+ Sbjct: 228 RIGETYLIGANGEKNNITVL--------RMILKMMGQSEDAFDWVKDRPGHDRRYAIDST 279 Query: 300 KIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 K+++E+GW P + ESGL +T+ WY +N WW Sbjct: 280 KLQTELGWTPTHTDFESGLKQTIDWYTENRQWW 312 >gi|255327300|ref|ZP_05368374.1| dTDP-glucose 4,6-dehydratase [Rothia mucilaginosa ATCC 25296] gi|255295580|gb|EET74923.1| dTDP-glucose 4,6-dehydratase [Rothia mucilaginosa ATCC 25296] Length = 338 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/342 (45%), Positives = 209/342 (61%), Gaps = 24/342 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS +L+++ + V+DK+TYA N SL+ + +S F + DI D Sbjct: 9 HILVTGGAGFIGSNFVHHLIDNTDHTITVLDKMTYAANAASLEGLPESR-FKLVVGDIAD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + + DA+V++AAESH D S+ + FI TN+IGTF LLE R Sbjct: 68 RELADELVG--KADAVVHYAAESHNDNSLSNPEPFIHTNLIGTFSLLEAVR--------- 116 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ ISTDEV+G L D F+E PYNPSSPYS+TKA SD LV AW ++GI Sbjct: 117 -KHGTRYHHISTDEVFGDLELDDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIE 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG+G NVRDW++ DH A+ +L+ Sbjct: 176 ATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILE 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+IGE Y IG + E NI ++ I L+ + H + DRPGHD RYAID Sbjct: 236 QGKIGETYLIGADGEENNITVLRTILRLM-GKDENDFEH------VVDRPGHDLRYAIDG 288 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 S++++E+GW P+ + ESGL T+ WY DN WW PL E++ Sbjct: 289 SRLRAELGWEPKFTDFESGLADTIKWYTDNRGWWEPLKAEVE 330 >gi|50954291|ref|YP_061579.1| thymidine diphosphoglucose 4,6-dehydratase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950773|gb|AAT88474.1| thymidine diphosphoglucose 4,6-dehydratase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 217/341 (63%), Gaps = 27/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M+++VTGGAGFIGS R + D +V+V+D LTY+GNL +L+ +S S ++F Sbjct: 1 MKILVTGGAGFIGSNFVRRTLQDAYPGLEGAEVVVLDALTYSGNLANLEPVSDSPRYTFA 60 Query: 56 QVDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + +I D L E P DA+V+ AAESHVDRS+ A F TN++GT LL+ Sbjct: 61 KGEIRDS----GLLDELFPAVDAVVHCAAESHVDRSVRDASIFAETNVLGTQQLLD---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + L + K RF+ +STDEVYGS+ +G + E+ P P+SPYSA+KA SD L ++ Sbjct: 113 --AALRNEVK---RFVHVSTDEVYGSIAEGSWDEERPLEPNSPYSASKAGSDLLARSYFR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+ + ++ CSNNYGPYHFPEK+IPL +T +I+ HV LYG+G N+RDWL+V+DH R + Sbjct: 168 THGLNLSITRCSNNYGPYHFPEKVIPLFVTNLIDDKHVPLYGEGNNIRDWLHVDDHTRGI 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +VL GR GE YNIGG E N ++ LLDA K +S+ + + DR GHD R Sbjct: 228 AMVLVNGRAGEIYNIGGGTELTNKELT---QLLLDA-TGKDWSYVDR---VADRLGHDLR 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 Y++D SKI+SE+G+ P E GL V WY DN WW PL Sbjct: 281 YSVDISKIRSELGYEPLVPFEQGLTDVVQWYRDNRAWWEPL 321 >gi|229492624|ref|ZP_04386427.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis SK121] gi|229320610|gb|EEN86428.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis SK121] Length = 334 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/338 (45%), Positives = 206/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V ++V V+D LTYAGN SL + + +F+ ++ Sbjct: 1 MRLLVTGGAGFIGANFVHQTVATRPDVEVTVLDALTYAGNRQSLASVEER--ITFVHGNV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + DA+V+FAAESH D S+ + F+ TN++GTF LL+ R Sbjct: 59 ADEPLVDDLVS--RSDAVVHFAAESHNDNSLADPEPFLRTNVMGTFSLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ ISTDEVYG L D F+E PYNPSSPYSA+KASSD V AW ++G Sbjct: 110 ---SHGVRYHHISTDEVYGDLELDDPAKFTETTPYNPSSPYSASKASSDLFVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGPY EK IP IT +++G LYG+G+NVRDW++VEDH RA++ + Sbjct: 167 IAATISNCSNNYGPYQHVEKFIPRQITNLLDGVRPRLYGEGRNVRDWIHVEDHNRAVWDI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +G+ GE Y IG + E N + I LL+ K + F+ DRPGHD RYAI Sbjct: 227 LDRGKSGETYLIGADGETDNRTV---IATLLEIFGRKP----DDFDFVTDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DS++++ E+GW PQ + SGL TV WY DN WWRP Sbjct: 280 DSTRLQQELGWKPQYRDFRSGLEATVEWYRDNEQWWRP 317 >gi|261338605|ref|ZP_05966489.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium gallicum DSM 20093] gi|270276321|gb|EFA22175.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium gallicum DSM 20093] Length = 336 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/337 (45%), Positives = 210/337 (62%), Gaps = 25/337 (7%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS RY L + + V V+D LTYAGN ++L + S L F+ DICD Sbjct: 7 LLVTGGAGFIGSNFVRYVLQHHHDVHVTVLDALTYAGNRDNLSGLPDSRL-RFVHGDICD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D I A+ F+ TN+IGT L+E Sbjct: 66 AALLDQVVP--GQDAIVHFAAESHNDAGIANAEPFMQTNVIGTMRLVEAA---------- 113 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+E PY PSSPY+A+KA+SD++V AW T+G+ Sbjct: 114 VRHDVRFHHISTDEVYGDLALADTSRFTETSPYRPSSPYAASKAASDHIVRAWHRTHGLR 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT +++G LYG+G NVRDW++V+DH RA++ +L Sbjct: 174 ATISNCSNNYGPYQHVEKFIPRTITNILDGKRPKLYGNGLNVRDWIHVDDHSRAVWEILT 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIG+ Y +G E NI+++ LL L+ + + + +++DRPGHD RYA+D+ Sbjct: 234 RGRIGQTYLVGAQGEHSNIEVL----RLLLQLMGQPH---DAFDWVKDRPGHDLRYALDA 286 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 SK++ E+ W P + E GL + VCWY + WWRP+ Sbjct: 287 SKLQRELQWKPCHTDFEQGLREIVCWYAAHESWWRPM 323 >gi|308235688|ref|ZP_07666425.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14018] gi|311114285|ref|YP_003985506.1| dTDP glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14019] gi|310945779|gb|ADP38483.1| dTDP glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14019] Length = 344 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 153/335 (45%), Positives = 210/335 (62%), Gaps = 25/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS Y+VN+ + V V+D LTYAGN+ ++ + + + F+ +ICD Sbjct: 15 IIVTGGCGFIGSNFVHYVVNNHPETHVTVLDALTYAGNIENIAGLPEDRV-DFVHGNICD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D SI + F+ TN+ GTF LLE R Sbjct: 74 AELLDKLVPGH--DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVR--------- 122 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ ISTDEVYG L D F+E+ PY+PSSPYS+TKA+SD LV AW TYG+ Sbjct: 123 -KYGIRYHHISTDEVYGDLALDDPAKFTEETPYHPSSPYSSTKAASDMLVRAWTRTYGLH 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G NVRDW++ EDH A++ +L Sbjct: 182 TTISNCSNNYGPYQHVEKFIPRQITNILEGIKPKLYGQGLNVRDWIHTEDHSSAVWTILT 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G Y IG N E+ NI ++ ++ ++ K EL++ DRPGHDRRYAIDS Sbjct: 242 KGELGNTYLIGANGEKNNITVL----RMILEMMGKDADDFELVK---DRPGHDRRYAIDS 294 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 +K+++++GW P+ + +GL +T+ WY +N WW Sbjct: 295 TKLQTQLGWKPKHTDFTTGLEQTIKWYTENRAWWE 329 >gi|296331423|ref|ZP_06873895.1| putative dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676408|ref|YP_003868080.1| putative dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151538|gb|EFG92415.1| putative dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414652|gb|ADM39771.1| putative dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. spizizenii str. W23] Length = 315 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 211/327 (64%), Gaps = 20/327 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + ++ + ++ V+DKLTYA + ++++ +++ F F++ DI +E Sbjct: 6 LITGGAGFIGLTFTKLMLKETDARITVLDKLTYASHPEEMEKLKENSRFRFVKGDISVQE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I A E D +++FAAESHVDRSI A+ FITTN++GT+ RL + L K Sbjct: 66 DIDRAFDETY-DGVIHFAAESHVDRSISQAEPFITTNVMGTY------RLAEAVLQGKAK 118 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ISTDEVYG L D F+E P +P++PYSA+KASSD LVLA+ T+ +P ++ Sbjct: 119 ---KLIHISTDEVYGDLEADDPAFTETTPLSPNNPYSASKASSDLLVLAYVKTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I +G V LYGDG +RDWL+ EDH RA+ L+L+KG Sbjct: 176 TRCSNNYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YNIGG NER N + L ++I K EL +EDR GHDRRYAI++SK+ Sbjct: 236 DGEVYNIGGGNERTNKE--------LASIIMKHLGCEELFAHVEDRKGHDRRYAINASKL 287 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNN 328 K+E+GW + E G+ +T+ WY DN+ Sbjct: 288 KNELGWRQEVPFEEGIARTIRWYTDND 314 >gi|319789559|ref|YP_004151192.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] gi|317114061|gb|ADU96551.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] Length = 331 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 149/339 (43%), Positives = 216/339 (63%), Gaps = 19/339 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGS R V + V V+D LTYAG+L L + + F +VD+ Sbjct: 1 MKLLVTGGAGFIGSEFVRQAV-ERGYDVCVLDALTYAGDLERLHSVE--GRYRFYRVDLT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + LKE +PD +V+FAAESHVDRSI+ F+TTN++GT LL+ + Sbjct: 58 DRSRVFNVLKEEKPDVVVHFAAESHVDRSIVEPTVFVTTNVLGTQNLLD---------AA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ISTDEVYG + +G F+E+ P NPSSPYSA+KA++D L A+ T+G+PV+ Sbjct: 109 VEAGVEKFVNISTDEVYGEIAQGRFTEESPLNPSSPYSASKAAADMLGRAYHRTFGLPVV 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 SNNYGP+ +PEKLIP+ + + + + +YGDG NVR+WL+V D RA++ ++KG Sbjct: 169 TVRPSNNYGPWQYPEKLIPVVVLKALLNEPIPVYGDGSNVREWLFVSDCARAVFAAVEKG 228 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 G YN+G + E++NI++V I +L P+S LI F++DRPGHD RYA+D + Sbjct: 229 EPGRVYNVGSSQEKRNIEVVKAILSILGK--PES-----LITFVKDRPGHDYRYALDWER 281 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 + E+GW P E G+ +TV W ++N W EL+ Sbjct: 282 ARRELGWEPAVKFEEGIERTVKWLVENRDWLERKLSELR 320 >gi|161367405|gb|ABX71131.1| Lct48 [Streptomyces rishiriensis] Length = 326 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 216/337 (64%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRY-----LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL VTGGAGFIGSA R L + + V V+DKLTYAG+ ++L ++ F+ Sbjct: 1 MRLFVTGGAGFIGSAYVRAVLDGALPDSATVDVTVLDKLTYAGSRDNLP--ARHPRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CD + L DA+++FAAESHVDRSI + F+ TN+ GT LLE R Sbjct: 59 RGDVCDLPLLLDVLPGH--DAVLHFAAESHVDRSIEASAAFVHTNVGGTQSLLEACR--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R + +STDEVYGS+ +G ++E+ P P++PY+A+KA+SD + ++ T+ Sbjct: 114 ------RTGVERVVHVSTDEVYGSIAEGSWTEEWPLRPNTPYAASKAASDLVARSYWKTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEKLIPL IT ++EG V LYGDG N+R+WL+V+DH RAL+L Sbjct: 168 GLDVSITRCSNNYGPHQHPEKLIPLFITNLLEGIPVPLYGDGLNIREWLHVDDHCRALHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YN+GG NE NIDI + L A + +IR + DR GHD RYA Sbjct: 228 VLARGRAGEVYNVGGGNELTNIDITRRLLALCGA-------DSSMIRRVPDRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID SKI++E+G+ P+ + + GL V WY D+ WW+ Sbjct: 281 IDESKIRAELGYAPRVDFDDGLAAVVAWYRDHPDWWK 317 >gi|310286567|ref|YP_003937825.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum S17] gi|309250503|gb|ADO52251.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum S17] Length = 341 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 205/334 (61%), Gaps = 25/334 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + V+DKLTYAGN ++ + S + + DICD Sbjct: 12 ILVTGGCGFIGANFVRYVARNHPHAHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 71 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+ED PY PSSPYSA+KASSD+LV AW TYG+ Sbjct: 120 -QHDVRFHHISTDEVYGDLALDDPARFTEDTPYRPSSPYSASKASSDHLVRAWVRTYGLR 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG+ LYG G+NVRDW++ EDH RA++ +L Sbjct: 179 ATISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E NI ++ I L+ P+ + ++ DRPGHDRRYAID+ Sbjct: 239 RGRIGETYLIGADGEMSNITVLRMILQLMGQ--PE-----DAFDWVRDRPGHDRRYAIDA 291 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 SK+++E+GW P + SGL + WY ++ WW Sbjct: 292 SKLRAELGWSPMHTDFASGLRNVIDWYAEHRDWW 325 >gi|313117360|ref|YP_004044343.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] gi|312294251|gb|ADQ68682.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] Length = 307 Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 150/326 (46%), Positives = 211/326 (64%), Gaps = 19/326 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS Y++ +V+ +D LTYAG+ +L+ + + F++ DI Sbjct: 1 MRILVTGGAGFIGSNFVHYVIEQYDDEVVTLDALTYAGSKENLEGVLDNPRHEFIEGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R + + D +VNFAAESHVDRSI GA F+ TN+ GT LL+ ++ Sbjct: 61 DEELVRDLVADV--DTVVNFAAESHVDRSIEGAKPFVETNVQGTQTLLD--------AAK 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + RFLQISTDEVYG + G FSED P NP +PYSATKAS+D+L ++ T+ +PVL Sbjct: 111 DSGIE-RFLQISTDEVYGQILDGKFSEDDPLNPRNPYSATKASADHLAKSFETTHDLPVL 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ NN+GP PEKLIP I EG + +YGDG NVR+W+Y ED+ RAL VL++G Sbjct: 170 ITRTCNNFGPRQHPEKLIPKFIKNASEGKSLPVYGDGSNVREWIYAEDNCRALDTVLREG 229 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIG + E+ N+++ +A++ + LI F+EDR GHD+RYA+++ K Sbjct: 230 EIGEIYNIGSHAEKTNLEVT-------EAILDAVGADKALIEFVEDRAGHDQRYALETEK 282 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD 326 I+S +GW P E GL +TV +YL+ Sbjct: 283 IES-LGWEPAYTFEEGLEETVEYYLE 307 >gi|321313342|ref|YP_004205629.1| dTDP-glucose 4,6-dehydratase [Bacillus subtilis BSn5] gi|320019616|gb|ADV94602.1| dTDP-glucose 4,6-dehydratase [Bacillus subtilis BSn5] Length = 315 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 209/327 (63%), Gaps = 20/327 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + ++ + ++ V+DKLTYA + + ++ Q++ F F++ DI +E Sbjct: 6 LITGGAGFIGLTFTKLMLRETDARITVLDKLTYASHPEEMGKLKQNSRFRFVKGDISVQE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I A E D +++FAAESHVDRSI A+ FITTN++GT+ RL + L K Sbjct: 66 DIDRAFDETY-DGVIHFAAESHVDRSISQAEPFITTNVMGTY------RLAEAVLKGKAK 118 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ISTDEVYG L D F+E P +P++PYSA+KASSD LVL++ T+ +P ++ Sbjct: 119 ---KLIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I +G V LYGDG +RDWL+ EDH RA+ L+L+KG Sbjct: 176 TRCSNNYGPYQHSEKMIPTIIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YNIGG NER N + L + I K EL +EDR GHDRRYAI++SK+ Sbjct: 236 DGEVYNIGGGNERTNKE--------LASAILKHLGCEELFAHVEDRKGHDRRYAINASKL 287 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNN 328 K+E+GW + E G+ +T+ WY DN+ Sbjct: 288 KNELGWRQEVTFEEGIARTIQWYTDND 314 >gi|5579434|gb|AAD45555.1|U70376_20 SpcJ [Streptomyces netropsis] Length = 328 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 214/343 (62%), Gaps = 23/343 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-----VLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ + + V V+DKLTYAG +L ++ + F+ Sbjct: 1 MRILVTGGAGFIGSEFVRSLLLTAEPERNTPWVTVLDKLTYAGVAANLDPVAGHPRYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD ++ DA+V+FAAESHVDRSI GA F+TTN++GT ++L+ Sbjct: 61 RGDICDAHLADHVMRGH--DAVVHFAAESHVDRSISGAGPFVTTNVVGTQVMLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+Q+STDEVYGS+ +G +SE P +P+SPY+A+KA +D L ++ T+ Sbjct: 113 ---AAYRHGVGRFVQVSTDEVYGSISEGSWSEGAPLDPNSPYAASKAGADLLAHSYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYGP FPEK+IPL IT +++G V LYGDGQ++RDWL+V DH R + L Sbjct: 170 GMDVVVTRCSNNYGPRQFPEKVIPLFITNLLDGREVPLYGDGQHMRDWLHVSDHCRGIRL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ G+ GE Y+IGG E N + G LL+A + + +R + DR GHD RY+ Sbjct: 230 ALRHGKAGETYHIGGGTELTNEALT---GLLLEA----TGRGWDSVRRVPDRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 + + +G+ + E GL TV WY +N WW PL + + Sbjct: 283 LRCDNARQHLGYEAEVGFEKGLADTVAWYRNNRSWWEPLKRRM 325 >gi|283851959|ref|ZP_06369235.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. FW1012B] gi|283572683|gb|EFC20667.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. FW1012B] Length = 339 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 156/335 (46%), Positives = 211/335 (62%), Gaps = 22/335 (6%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQV 57 MRL+VTGG GFIGS R L + ++ +D LTYAGN SL ++ + ++ + F + Sbjct: 1 MRLLVTGGCGFIGSNFIRDMLARHDGLTIVNLDALTYAGNRQSLADVEAAYADRYVFARG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + E +E +A+VNFAAE+HVDRSI A F+ TN+ GT LL+ RL+ Sbjct: 61 DIANSELALHLFEEHNIEAVVNFAAETHVDRSISDASPFVRTNVAGTQSLLDAARLYGIR 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+ +STDEVYG+L G FSE+ P P+SPYSA+KA +D LV A TYG Sbjct: 121 ---------RFVHVSTDEVYGTLGPDGKFSEETPLAPNSPYSASKAGADMLVRAAHETYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +++ CSNNYGP+ FPEKLIPL ++ + + +YGDG NVRDW+YV DH R + L Sbjct: 172 MDTVITRCSNNYGPFQFPEKLIPLMFSKAVAEEPLPVYGDGLNVRDWIYVIDHCRGVELT 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYA 295 L KGR GE YN GG+ E+ NI++V I L AL P+S LIRF+ DRPGHDRRYA Sbjct: 232 LLKGRPGEVYNFGGDAEKPNIEVVRTI---LAALGKPES-----LIRFVTDRPGHDRRYA 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D +K E+G+ P+ + G+ +T+ WY N W Sbjct: 284 MDFTKATRELGFRPEYDFVRGIRETMDWYRQNGAW 318 >gi|120431552|gb|ABM21738.1| PdmY [Actinomadura hibisca] Length = 330 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 154/344 (44%), Positives = 215/344 (62%), Gaps = 25/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R ++ V V+DKLTYAGN ++L I L +F+ Sbjct: 1 MRILVTGGAGFIGSHYVRSVLAGRYPAVADALVTVVDKLTYAGNTDNLP-IGDPRL-TFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD +R L DA+V+FAAESHVDRS++ A EF TN++GT LL+ Sbjct: 59 KGDICDVPLLRELLPGH--DAVVHFAAESHVDRSLVSAGEFAVTNVLGTQSLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C+ R + +STDEV+GS+D G + E P +P SPY+A+KA+SD+ LA+ HT+ Sbjct: 111 CCVLAGIG---RVVHVSTDEVHGSIDTGSWDEAAPVDPRSPYAASKAASDHFALAYHHTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV+++ CSNNYGPY FPEK+IPL +T ++ G V L+GDG + R WL+V DH A+ Sbjct: 168 RLPVMITRCSNNYGPYQFPEKVIPLFVTNLLAGRPVPLFGDGLHRRQWLHVSDHCDAVQR 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL+ G GE YNIGG E N + L + L+ + +R + DR GHDRRYA Sbjct: 228 VLEDGAPGEVYNIGGGAELTNRE-------LTERLVALCGGGPDSVRHVADRKGHDRRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +D +KI++ +G+ P+ + E+GL + V WY DN WW P EL+ Sbjct: 281 LDDTKIRTSLGYRPRVDFETGLAEVVRWYRDNVEWWEPRRAELR 324 >gi|283458591|ref|YP_003363224.1| dTDP-D-glucose 4,6-dehydratase [Rothia mucilaginosa DY-18] gi|283134639|dbj|BAI65404.1| dTDP-D-glucose 4,6-dehydratase [Rothia mucilaginosa DY-18] Length = 332 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 209/342 (61%), Gaps = 24/342 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS +L+++ + V+DK+TYA N SL+ + +S F + DI D Sbjct: 3 HILVTGGAGFIGSNFVHHLIDNTDHTITVLDKMTYAANAASLEGLPESR-FKLVVGDIAD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + + DA+V++AAESH D S+ + FI TN+IGTF LLE R Sbjct: 62 RELADELVG--KADAVVHYAAESHNDNSLSNPEPFIHTNLIGTFSLLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R+ ISTDEV+G L D F+E PYNPSSPYS+TKA SD LV AW ++GI Sbjct: 111 -KHGTRYHHISTDEVFGDLELDDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGIE 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG+G NVRDW++ DH A+ +L+ Sbjct: 170 ATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGEGLNVRDWIHASDHSSAVLRILE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+IGE Y IG + E NI ++ I L+ + H + DRPGHD RYAID Sbjct: 230 QGKIGETYLIGADGEENNITVLRTILRLM-GKDENDFEH------VVDRPGHDLRYAIDG 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 S++++E+GW P+ + ESGL T+ WY +N WW PL E++ Sbjct: 283 SRLRAELGWEPKFTDFESGLADTIKWYTENRGWWEPLKAEVE 324 >gi|473600|gb|AAA21344.1| dTDP-glucose dehydratase [Streptomyces fradiae] Length = 333 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 210/341 (61%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN----DL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS L+ DL + +V+DKLTYAGN +L+ ++ F+ Sbjct: 1 MRVLVTGGAGFIGSHFTGQLLTGAYPDLGATRTVVLDKLTYAGNPANLEHVAGHPDLEFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D R ++ +V+FAAESHVDRSI ++ F+ TN+ GT +LL+ Sbjct: 61 RGDIADHGWWRRLMEGV--GLVVHFAAESHVDRSIESSEAFVRTNVEGTRVLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ ISTDEVYGS+ +G + ED P P+SPY+ATKA+SD L LA+ TY Sbjct: 113 ---AAVDAGVGRFVHISTDEVYGSIAEGSWPEDHPVAPNSPYAATKAASDLLALAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP +PEK +PL T +++G V LYGDG N R+WL+V+DH R + L Sbjct: 170 GLDVRVTRCSNNYGPRQYPEKAVPLFTTNLLDGLPVPLYGDGGNTREWLHVDDHCRGVAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V GR G YNIGG E N + L D ++ + +R + DRPGHDRRY+ Sbjct: 230 VGAGGRPGVIYNIGGGTELTNAE-------LTDRILELCGADRSALRRVADRPGHDRRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D++KI+ E+G+ P+ + GL TV WY DN WW PL + Sbjct: 283 VDTTKIREELGYAPRTGITEGLAGTVAWYRDNRAWWEPLKR 323 >gi|297625077|ref|YP_003706511.1| dTDP-glucose 4,6-dehydratase [Truepera radiovictrix DSM 17093] gi|297166257|gb|ADI15968.1| dTDP-glucose 4,6-dehydratase [Truepera radiovictrix DSM 17093] Length = 346 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 215/338 (63%), Gaps = 19/338 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQ 56 R++VTGG GFIGS+ R L+ + ++V+ +D +TYA + +L+E++ + ++F++ Sbjct: 8 QRVLVTGGLGFIGSSYVRLLLTETALEVVNLDLMTYAAHPETLQELTSDPRYAARYTFVK 67 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R AL+ DA+VNFAAE+HVDRSI A F+ TN+ G +LL+ R Sbjct: 68 GDIADPAVVRRALEGC--DAVVNFAAETHVDRSIHDAAPFVHTNVEGVRVLLDAVR---- 121 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ RF+ +STDEVYG + +GL ED P+ P SPYSA+KA D LV A+G TYG Sbjct: 122 --EAARERPVRFVHVSTDEVYGEVLEGLSREDDPFRPRSPYSASKAGGDLLVGAYGVTYG 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +++ SNNYG + FPEK+IPL IT ++ + +YG G+ +RD+++V DHVR ++ Sbjct: 180 LDTVVTRGSNNYGTHQFPEKIIPLFITNALDDQPLPVYGTGKAIRDYIFVTDHVRGIHAA 239 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GR GE YN+GG N+ + + I LDAL HT LI+ ++DRPGHD RYA+ Sbjct: 240 LLRGRRGEAYNLGGQNQTDGLSVARTI---LDAL---GKPHT-LIQHVQDRPGHDLRYAL 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +K E+GW P G+ +TV WY ++ WWRPL Sbjct: 293 DITKATRELGWRPTVTFAEGIAQTVRWYQEHPDWWRPL 330 >gi|125625378|dbj|BAF46773.1| Putative dTDP-glucose-4,6-dehydratase [Nocardia brasiliensis] Length = 357 Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 152/337 (45%), Positives = 208/337 (61%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +RL+VTGGAGFIG+ V + +V+V+D LTYAGN SL ++ + F+ D+ Sbjct: 25 VRLLVTGGAGFIGANFVHQTVTERPDTRVVVLDALTYAGNRASLDPVA--DRIDFVHGDV 82 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + + DA+V+FAAESH D S+ F+ TNI+GTF LL+ R Sbjct: 83 ADAELVNRLVAD--ADAVVHFAAESHNDNSLAQPWPFVQTNIVGTFALLQAVR------- 133 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R+ ISTDEVYG L D F+E PYNPSSPYSA+KASSD LV AW ++G+ Sbjct: 134 ---EHDVRYHHISTDEVYGDLEPDDPAFTETTPYNPSSPYSASKASSDLLVRAWVRSFGV 190 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +I+G LYG G +RDW++V+DH RA++ VL Sbjct: 191 RATISNCSNNYGPYQHVEKFIPRQITNLIDGVRPRLYGAGHQIRDWIHVDDHNRAVWAVL 250 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++GRIG+ Y IG N E N +V + L+ + T+ + DRPGHD+RYAID Sbjct: 251 ERGRIGQTYLIGANGELDNKSVVQQ-------LLAEFGRPTDDFDHVTDRPGHDQRYAID 303 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 + +++E+GW P+ + +GL T+ WY DN WWRP Sbjct: 304 PTLLRTELGWEPRYRDFRAGLAATIQWYRDNESWWRP 340 >gi|332671018|ref|YP_004454026.1| dTDP-glucose 4,6-dehydratase [Cellulomonas fimi ATCC 484] gi|332340056|gb|AEE46639.1| dTDP-glucose 4,6-dehydratase [Cellulomonas fimi ATCC 484] Length = 331 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 155/344 (45%), Positives = 212/344 (61%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V + +QV V+D LTYAG+ SL + +F+ + DI Sbjct: 1 MHVLVTGGAGFIGANFVHQTVRERPDVQVTVLDALTYAGDERSLDPVEGRVVFA--KGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + S +K+ D +V+FAAESH D S+ F+ TN+IGT+ LLE R Sbjct: 59 ADPDIVDSLVKDV--DLVVHFAAESHNDNSLHDPWPFVRTNVIGTYQLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ ISTDEVYG L D F+ + PYNPSSPYS+TKASSD LV AW ++G Sbjct: 110 ---RHGVRYHHISTDEVYGDLELDDPAKFTPETPYNPSSPYSSTKASSDLLVRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++V+DH A++ + Sbjct: 167 VQATISNCSNNYGPYQHVEKFIPRQITNVLDGVRPKLYGTGENVRDWIHVDDHNSAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG + E N +V I ++ P+ + + DRPGHD RYAI Sbjct: 227 IEKGRIGETYLIGADGEENNKSVVESILEIMGQ--PR-----DAYDLVSDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 DS+K++ E+GW P+ EN +GL TV WY N WWRP +E + Sbjct: 280 DSTKLREELGWTPRYENFRAGLEATVEWYRANEAWWRPRKEETE 323 >gi|227505631|ref|ZP_03935680.1| dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium striatum ATCC 6940] gi|227197784|gb|EEI77832.1| dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium striatum ATCC 6940] Length = 335 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 212/347 (61%), Gaps = 31/347 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIG+ R + + ++++ V+DKLTYAGN +L+ + + DI Sbjct: 3 RMLVTGGAGFIGANFVRLVAKERPEVEITVLDKLTYAGNRANLEGVEARLVVG----DIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + Q D +V+FAAESH D S+ FI TN++GTF L+E R Sbjct: 59 DAVLVDELVA--QSDVVVHFAAESHNDNSLRDPSPFIQTNVVGTFTLIEACR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF +STDEV+G L+ G F+E PYNPSSPYSA+KA SD+LV AW ++G+ Sbjct: 109 --KHDVRFHHVSTDEVFGDLEIGADTKFTESTPYNPSSPYSASKAGSDHLVRAWVRSFGL 166 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +++ LYG G+ VRDW++V+DH A+ +L Sbjct: 167 RATISNCSNNYGPYQHVEKFIPRQITNLLDDQPAKLYGTGEQVRDWIHVDDHNAAVLAIL 226 Query: 238 KKGRIGERYNIGGN----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +G IGE YNIG + N ++ I+++ EI D Y H + DRPGHD+R Sbjct: 227 DRGEIGETYNIGADQKDINNKEVIEVICEIMGATDETGKARYEH------VADRPGHDQR 280 Query: 294 YAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 YA+D+SK++ E+GW P+ ++ GL +T+ WY DN WWRP+ +++ Sbjct: 281 YAMDASKLRRELGWVPRYTDLRVGLEQTITWYHDNEQWWRPVKGDVE 327 >gi|326774970|ref|ZP_08234235.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] gi|326655303|gb|EGE40149.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] Length = 324 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 219/337 (64%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ ++ V+DKLTYAG+ +L + + F+ Sbjct: 1 MRILVTGGAGFIGSHYARSLLAGRYGAAPDTRITVLDKLTYAGDRENLP--AHHDRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CD +R L DAIV+FAAESHVDRS+ G EF+ TN +GT +LLE Sbjct: 59 RGDVCDGALLRELLPGH--DAIVHFAAESHVDRSVAGGREFVRTNALGTQVLLEA----- 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + LS+ + R L ISTDEVYGS+++G ++E+ P P+SPY+A+KAS+D + ++ T+ Sbjct: 112 ASLSRVE----RVLHISTDEVYGSIEQGSWTEERPLLPNSPYAASKASADLIARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY PEKL+P +T ++ G V +YGDG+N R+W++V+DH RA++L Sbjct: 168 GLDVSITRCSNNYGPYQHPEKLVPRFVTNLLRGRKVPVYGDGRNRREWIHVDDHCRAIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KG GE YN+G +E +N+ L + L+ + +I ++EDR GHD RYA Sbjct: 228 VLAKGGAGEIYNVGSGDELENLR-------LAEHLLALCGADASMIEYVEDRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D +KI+ ++G+ PQ ++ G+ +TV WY N WW+ Sbjct: 281 LDDTKIREQLGYEPQVPLDRGIAETVAWYEANPRWWQ 317 >gi|311742182|ref|ZP_07715992.1| dTDP-glucose 4,6-dehydratase [Aeromicrobium marinum DSM 15272] gi|311314675|gb|EFQ84582.1| dTDP-glucose 4,6-dehydratase [Aeromicrobium marinum DSM 15272] Length = 334 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 205/337 (60%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIGS +++ V+V+D LTYAGN SL+ + Q L F+ DI Sbjct: 4 TRLLVTGGAGFIGSNFVHHVLGHTDHDVVVLDALTYAGNRASLEGLPQDRL-QFVHGDIT 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + E DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 63 DADLVDRLVGEC--DAVVHYAAESHNDNSLDNPRPFLDTNIIGTYTLLEAAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF ISTDEVYG L D F+E PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 113 --RHGTRFHHISTDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGV 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP +T ++ G LYG G+NVRDW++ +DH A+ VL Sbjct: 171 RATISNCSNNYGPYQHVEKFIPRQVTNVLRGIRPKLYGAGENVRDWIHADDHSSAVLAVL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G IGE Y IG + ER N D+V E+ +Y H + DR GHD RYAID Sbjct: 231 DRGVIGETYLIGADGERNNKDVV-ELILTTMGRPADAYDH------VTDRAGHDLRYAID 283 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 S+++++E+GW PQ ++ E+GL TV WY ++ WW P Sbjct: 284 STRLRTELGWTPQFQDFEAGLAATVDWYREHEAWWAP 320 >gi|225020237|ref|ZP_03709429.1| hypothetical protein CORMATOL_00240 [Corynebacterium matruchotii ATCC 33806] gi|224946981|gb|EEG28190.1| hypothetical protein CORMATOL_00240 [Corynebacterium matruchotii ATCC 33806] Length = 334 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 152/348 (43%), Positives = 209/348 (60%), Gaps = 31/348 (8%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ R L + ++ V+DKLTYAGN ++L + F+Q D+ Sbjct: 1 MKMLVTGGAGFIGTNFVRRTLTTRPEYEITVLDKLTYAGNSSNLTGLD----VHFVQGDV 56 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +K D +V+FAAE+HVD S+ F+ +N++GTF LLE R Sbjct: 57 ADRELVDKLVK--TSDVVVHFAAETHVDASLRDPAAFVHSNVVGTFALLEAIR------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R ISTDEV+G L D F+E PYNPSSPYSATKA +D+LV AW ++ Sbjct: 108 ---KYDTRLHYISTDEVFGDLELTDPRRFTETSPYNPSSPYSATKAGADHLVRAWIRSFN 164 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP LS+CSNNYGPY EK IP IT ++ LYG G +RDW++V+DH A+ L+ Sbjct: 165 IPATLSHCSNNYGPYQHIEKFIPRQITNILTHRTPKLYGTGAQIRDWIHVDDHNSAVQLI 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G IGE Y IG +N+ V + L L P +Y H + DRPGHD+RYA+ Sbjct: 225 LDNGTIGESYIIGADNDHITNKQVISLICELMGLSPDAYEH------VSDRPGHDQRYAM 278 Query: 297 DSSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 DS+K+++E+GW PQ M +GL +T+ WY +N WW PL +++ Sbjct: 279 DSTKLRTELGWRPQFTDTDTGMRTGLAETIAWYTENRAWWEPLKAQVE 326 >gi|182434431|ref|YP_001822150.1| putative NDP-glucose-4,6-dehydratase [Streptomyces griseus subsp. griseus NBRC 13350] gi|4884773|gb|AAD31800.1|AF128273_3 TDP-glucose-4,6-dehydratase homolog [Streptomyces griseus] gi|178462947|dbj|BAG17467.1| putative NDP-glucose-4,6-dehydratase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 324 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 219/337 (64%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L+ ++ V+DKLTYAG+ +L + + F+ Sbjct: 1 MRILVTGGAGFIGSHYARSLLAGRYGAAPDTRITVLDKLTYAGDRGNLP--AHHDRLEFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CD +R L DAIV+FAAESHVDRS+ G EF+ TN +GT +LLE Sbjct: 59 RGDVCDGALLRELLPGH--DAIVHFAAESHVDRSVAGGREFVRTNALGTQVLLEA----- 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + LS+ + R L ISTDEVYGS+++G ++E+ P P+SPY+A+KAS+D + ++ T+ Sbjct: 112 ASLSRVE----RVLHISTDEVYGSIEQGSWTEERPLLPNSPYAASKASADLIARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY PEKL+P +T ++ G V +YGDG+N R+W++V+DH RA++L Sbjct: 168 GLDVSITRCSNNYGPYQHPEKLVPRFVTNLLRGRKVPVYGDGRNRREWIHVDDHCRAIHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KG GE YN+G +E +N+ L + L+ + +I ++EDR GHD RYA Sbjct: 228 VLAKGGAGEIYNVGSGDELENLR-------LAEHLLALCGADASMIEYVEDRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D +KI+ ++G+ PQ ++ G+ +TV WY N WW+ Sbjct: 281 LDDTKIREQLGYEPQVPLDRGIAETVAWYEANPRWWQ 317 >gi|325002409|ref|ZP_08123521.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia sp. P1] Length = 336 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 156/339 (46%), Positives = 210/339 (61%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R LVN V V+D TYAG +L +S S Sbjct: 10 MRLVVTGGAGFIGSHFVRTLVNGGYEPFTGADVTVLDAFTYAGREENLDSVSDSPQLHVQ 69 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI R+ +R A D +V+FAAE+HVDRSI GA +F+TTN++GT +LL+ Sbjct: 70 RADI--RDPVRVAEVLAGADVVVHFAAETHVDRSITGAADFVTTNVVGTQVLLQ------ 121 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L RF+ +STDEVYGS+D+G + E+ P P+SPYSA KA SD L ++ T+ Sbjct: 122 AALDLGVG---RFVHVSTDEVYGSIDEGSWPENHPLEPNSPYSAAKAGSDLLARSYHRTH 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYGPY FPEK+IPL +T +++G V LYGDG NVRDWL+V+DH + L Sbjct: 179 GLDVVITRCSNNYGPYQFPEKVIPLFVTNLLDGQRVPLYGDGLNVRDWLHVDDHCHGIAL 238 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 KG GE YNIGG E +N ++ L+ E+I + DR GHDRRY+ Sbjct: 239 AAAKGGAGEIYNIGGGTELQNRELTAR-------LLTAVGVGDEMIERVPDRKGHDRRYS 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D SKI E+G+ P+ + + GL +TV WY +N WW PL Sbjct: 292 VDWSKIHDELGYEPRRSFDDGLAETVAWYQENRGWWEPL 330 >gi|315445633|ref|YP_004078512.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] gi|315263936|gb|ADU00678.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] Length = 331 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 201/337 (59%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAGFIGS ++V V V+DKLTYAGNL SL + + + +F DI Sbjct: 1 MRLLVTGGAGFIGSNFVHHVVRHTDYDVTVLDKLTYAGNLASLSGLLEQRV-TFALGDIA 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + DAIV++AAESH D S+ F+ TN+IGTF LLE R Sbjct: 60 DAARVDDLVA--SADAIVHYAAESHNDNSLHDPYPFLKTNLIGTFTLLEAAR-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF +STDEVYG L D F+E+ PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 110 --KHGTRFHHVSTDEVYGDLHLDDPFRFTENTPYNPSSPYSSTKAGSDLLVRAWARSFGV 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYG + EK IP IT ++ G LYG G +VRDW++ +DH A+ +L Sbjct: 168 AATISNCSNNYGAFQHVEKFIPRQITNVLRGVRPKLYGSGHHVRDWIHADDHSSAVLAIL 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++GRIGE Y IG N E+ N +V E+ L Y H + DR GHD RYAID Sbjct: 228 QRGRIGETYLIGANGEKDNRSVV-ELILRLMGRPTDDYDH------VPDRAGHDLRYAID 280 Query: 298 SSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 S+K++ E+GW P EN E GL T+ WY +N WW P Sbjct: 281 STKLRDELGWRPLYENFEQGLTATIQWYRENADWWAP 317 >gi|117164954|emb|CAJ88506.1| putative dehydratase [Streptomyces ambofaciens ATCC 23877] Length = 348 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 208/340 (61%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M L+VTG AGFIGS R L+ ++ V+D LTYAG +L + L F+ Sbjct: 1 MNLLVTGAAGFIGSRYVRTLLASDAPEPPRITVLDSLTYAGTPENLP-LGHPRL-DFVHG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + D +V+FAAESHVDRSI A F+ TN++GT LL+ Sbjct: 59 DIRDAALVDKLMAGT--DQVVHFAAESHVDRSIDAAAGFVLTNVVGTQTLLD-------- 108 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F+ +STDEVYGS+D G +E+ P PSSPYSA+KAS D L LA T+G+ Sbjct: 109 -AALRHGVGPFVHVSTDEVYGSVDSGSATEEHPLRPSSPYSASKASGDLLALAHHRTHGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ CSNNYGPY FPEKL+PL +TR+++G V LYGDG+NVRDWL+V+DH R + LV Sbjct: 168 DVRVTRCSNNYGPYQFPEKLVPLFVTRLLDGRKVPLYGDGRNVRDWLHVDDHCRGVDLVR 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GR GE YN+GG E N D+ G LLDA + + + +EDR GHD RY++D Sbjct: 228 TRGRAGEVYNLGGGTELSNRDLT---GLLLDAC----GAGWDRVAHVEDRKGHDLRYSVD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 SK + E+G+ P+ + +GL TV WY DN WW PL + Sbjct: 281 WSKARDELGYRPRHDFTTGLEGTVAWYRDNRAWWEPLQRR 320 >gi|284047225|ref|YP_003397565.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] gi|283951446|gb|ADB54190.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] Length = 331 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 149/334 (44%), Positives = 205/334 (61%), Gaps = 22/334 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+V GGAGFIGS R V + V+V+DKLTYAG +L ++ F+ I Sbjct: 1 MKLLVCGGAGFIGSNFVRIRVKEHGDDVVVLDKLTYAGRRENLHDVLDD--IRFVHGAIE 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ DA+VNFAAE+HVDRSI D F+ TN GT++LLE R Sbjct: 59 DPAAVADAIAGV--DAVVNFAAETHVDRSIAEPDAFVVTNGQGTYVLLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R++QISTDEVYGS+++G F+E+ P PSSPYSATK +D LV ++ HTYG+ + Sbjct: 109 --AAGVRYVQISTDEVYGSIEEGSFTEESPLQPSSPYSATKTGADLLVTSYFHTYGLETV 166 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGPY +PEKLIPL + + G + +YGDG VR+WLYV D R + VL+ G Sbjct: 167 ICRGSNNYGPYQYPEKLIPLMVLNALHGDKLPVYGDGMQVRNWLYVTDFGRGIGHVLEHG 226 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+GG +E NI++V I + + + LI ++ DRPGHDRRY++ S K Sbjct: 227 NPGEVYNVGGPDECPNIEVVKRI-------VAATGNDESLIEYVTDRPGHDRRYSLASEK 279 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +GW Q + GL +TV WY +N WW P+ Sbjct: 280 LRA-LGWEAQVHFAEGLEQTVEWYRENTSWWEPI 312 >gi|328951358|ref|YP_004368693.1| dTDP-glucose 4,6-dehydratase [Marinithermus hydrothermalis DSM 14884] gi|328451682|gb|AEB12583.1| dTDP-glucose 4,6-dehydratase [Marinithermus hydrothermalis DSM 14884] Length = 336 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 224/349 (64%), Gaps = 24/349 (6%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TGGAGFIGS RY L + + +V+V+DKLTYAGNL +L+ + + +F+Q DI Sbjct: 5 RVLITGGAGFIGSNYVRYALAHHPEWEVVVLDKLTYAGNLENLEGVM--DRITFIQGDIA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E R A+ DA+VNFAAESHVDRS+L F+ TN+ GT +LLEE R Sbjct: 63 NPEDARRAMA--GADAVVNFAAESHVDRSLLDPRPFVKTNVEGTLVLLEEAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFLQ+STDEVYG L + E P P SPY+A+KA +++LV A+G +YG+ Sbjct: 113 -RAGVKRFLQVSTDEVYGDLSGTERHSVETDPLRPRSPYAASKAGAEHLVFAYGVSYGLE 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ SN YGPY +PEK+IPL IT +EG + +YGDG VRD+L+VEDH + LVL Sbjct: 172 VVVTRGSNTYGPYQYPEKIIPLFITNALEGKPLPVYGDGSAVRDYLHVEDHCAGIDLVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YN+G + +++ + LL P+ ELIRF+ DRPGHD RY++D Sbjct: 232 KGTAGEAYNLGARLAVRGVEVAERVLGLLGK--PR-----ELIRFVADRPGHDYRYSVDP 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 SK ++ +GW + + E+GL +TV WY+++ WWR + ++ + +KW Sbjct: 285 SKAEA-LGWERRWSFEAGLRQTVRWYVEHAGWWRRAKERIEFRDLETKW 332 >gi|74026487|gb|AAZ94396.1| putative TDP-glucose 4,6-dehydratase [Streptomyces neyagawaensis] Length = 326 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 154/343 (44%), Positives = 215/343 (62%), Gaps = 26/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ------VLVIDKLTYAGNLNSLKEISQSNLFSF 54 M L+VTG AGFIGSA R L+ Q V V+D LTYAG+L++L ++ L +F Sbjct: 1 MNLLVTGAAGFIGSAYVRMLLAGGTAQRSGVSEVTVLDSLTYAGSLDNL-DLGDPRL-TF 58 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DICD + ++ Q D +V+FAAESHVDRSI AD F+ TN+ GT LL+ Sbjct: 59 VRGDICDAPLVDKLMQ--QADQVVHFAAESHVDRSIASADAFVRTNVTGTQTLLDAAL-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF+ +STDEVYGS++ G +E P +P+SPY+A+KA+SD L L++ T Sbjct: 115 -------RHGVDRFVHVSTDEVYGSVESGSRTERDPLDPNSPYAASKAASDLLALSYHRT 167 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V ++ CSNNYGP FPEK+IPL +T +++G V LYGDG N RDWL+VEDH A+ Sbjct: 168 HGLDVRVTRCSNNYGPRQFPEKIIPLFLTTLLDGGDVPLYGDGLNRRDWLHVEDHCAAIE 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LV G G YNI G E N E+ L A + +++ +R + DR GHDRRY Sbjct: 228 LVRAGGVAGRVYNISGGIELSN----RELTARLLAAVGATWAR---VRQVPDRKGHDRRY 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 AID +++++E+G+ P+ + ESGL +T WY DN WW PL + Sbjct: 281 AIDCTRLRTELGYRPRHDFESGLAETFAWYRDNRDWWEPLKRR 323 >gi|164507715|emb|CAL64861.1| dTDP-glucose 4,6-dehydratase GacB [Streptomyces glaucescens] Length = 325 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 207/335 (61%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGSA R L++ + V V+DKLTYAG+L L + +F+Q D+ Sbjct: 5 ILVTGGAGFIGSAYVRRLLSPGAPGGVAVTVLDKLTYAGSLARLHAVRDHPGLTFVQGDV 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + D IV+FAAESHVDRSI + F TN++GT +LL+ + L Sbjct: 65 CDTALVDTLAARH--DDIVHFAAESHVDRSITDSGAFTRTNVLGTQVLLD------AALR 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+ +STDEVYGSL G +E P P+SPY+A+KA+SD + LA T+G+ V Sbjct: 117 HGVRT---FVHVSTDEVYGSLPHGAAAESDPLLPTSPYAASKAASDLMALAHHRTHGLDV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNN+GP+ PEKLIP +T ++ G V LYGDG++VRDWL+V+DHVRA+ LV Sbjct: 174 RVTRCSNNFGPHQHPEKLIPRFLTSLLSGGTVPLYGDGRHVRDWLHVDDHVRAVELVRVS 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR GE YNIGG N+++ + L A E I +E+R GHDRRYA+D S Sbjct: 234 GRPGEIYNIGGGTSLPNLELTHRLLALCGA-------GPERIVHVENRKGHDRRYAVDHS 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI +E+G+ P+ + + L T WY + WWRPL Sbjct: 287 KITAELGYRPRTDFATALADTAKWYERHEDWWRPL 321 >gi|257465950|ref|ZP_05630261.1| dTDP-glucose 4,6-dehydratase [Fusobacterium gonidiaformans ATCC 25563] gi|315917106|ref|ZP_07913346.1| dTDP-glucose 4,6-dehydratase [Fusobacterium gonidiaformans ATCC 25563] gi|313690981|gb|EFS27816.1| dTDP-glucose 4,6-dehydratase [Fusobacterium gonidiaformans ATCC 25563] Length = 368 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 156/360 (43%), Positives = 214/360 (59%), Gaps = 41/360 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQV-LVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIGS +Y++ ++ +++DKLTYA NL ++KE + F+Q DICD Sbjct: 5 LLTGAAGFIGSNFIKYMLKKYPERMYILLDKLTYAANLKNIKEELKKANVIFVQGDICDS 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ ++ D +VNFAAESHVDRSI F+ TNI+G L++ R WS +K Sbjct: 65 LLVKEIFVKYNIDYVVNFAAESHVDRSIANPRIFLETNILGVQNLMDRARECWSIGKDEK 124 Query: 123 -----KDQFRFLQISTDEVYGSLDKGL------------------------------FSE 147 +FLQISTDEVYGSL+K + F+E Sbjct: 125 GYPIYASGKKFLQISTDEVYGSLEKDIPDGKELSFQEEDLNQLIYGRRETKAYGNQFFTE 184 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 + P NP+SPYS +K S+D LV A+ TY P+ ++ CSNNYG + EKLIPL I + Sbjct: 185 ETPVNPNSPYSVSKTSADLLVKAYYETYHFPMNITRCSNNYGQFQHEEKLIPLMIKSALS 244 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G + +YGDG NVRDWLY+EDH +A+ +VL GR GE YNIGG NE+ N+ I I +L Sbjct: 245 GKELPVYGDGMNVRDWLYIEDHCKAIDMVLSSGREGEIYNIGGFNEKTNLYI---IHIIL 301 Query: 268 D--ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + A KS TELIRF+EDR GHDRRYAI+ KI E+GW+P+ E G+ +T+ ++ Sbjct: 302 EEIAKYEKSKPRTELIRFVEDRLGHDRRYAINPRKIVQELGWYPETTFEDGIKQTIQHFM 361 >gi|317153030|ref|YP_004121078.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio aespoeensis Aspo-2] gi|316943281|gb|ADU62332.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio aespoeensis Aspo-2] Length = 338 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 207/333 (62%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSN-LFSFLQVD 58 M+L+VTGG GFIG+ R ++ +V +DKLTYAGN +L ++ + + F++ D Sbjct: 1 MKLLVTGGCGFIGTNFIRLMLGSHPDWSIVNLDKLTYAGNRLNLADLERDEPRYRFVRGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICDR+ + L DA+VNFAAESHVDRSI F+TTN+ G L E C Sbjct: 61 ICDRDLVMDLLAGNSVDAVVNFAAESHVDRSISDPAPFVTTNVQGAQNLFE-------CA 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q + RF+ ISTDEVYG+L +G F+E P P+SPYSA+KA +D + A+ TYG Sbjct: 114 RQRRVG--RFVHISTDEVYGTLGPQGQFTESTPLAPNSPYSASKAGADLMARAYFETYGF 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++ CSNNYGPY FPEKLIPL + + +YGDGQNVRDW+YV+DH R + L L Sbjct: 172 PALITRCSNNYGPYQFPEKLIPLMYLTAMADKPLPVYGDGQNVRDWIYVDDHCRGVELTL 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KGR G YN GGN E N+++V + +L P+S LI F+ DRPGHDRRYA+D Sbjct: 232 LKGRDGCAYNFGGNAEETNLNVVKTLLSILGK--PES-----LITFVGDRPGHDRRYAMD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S +E+G+ P + +GL +T+ WY N W Sbjct: 285 YSLAAAELGFAPTLDFATGLRRTIDWYQANGEW 317 >gi|271967751|ref|YP_003341947.1| dTDP-glucose 4,6-dehydratase [Streptosporangium roseum DSM 43021] gi|270510926|gb|ACZ89204.1| dTDP-glucose 4,6-dehydratase [Streptosporangium roseum DSM 43021] Length = 325 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 155/348 (44%), Positives = 217/348 (62%), Gaps = 36/348 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++V GGAGFIGS R L++ + +V V+DKLTYAGN+ +L+ ++ F+F+ Sbjct: 1 MRILVPGGAGFIGSHYVRSLLSGIYPGYEDARVTVLDKLTYAGNMANLRPVAGHPRFAFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D + + E D IVNFAAE+HVDRSI A +F+ TN+ GT RL Sbjct: 61 RGDITDVRLLADVVPEH--DVIVNFAAETHVDRSITAAGDFVVTNVHGT------QRLLQ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L + +QISTDEVYGS+ G ++E P P+SPYSA KA +D L A+ T+ Sbjct: 113 AALDAGVRT---VVQISTDEVYGSIAAGSWTESEPLLPNSPYSAAKAGADLLCRAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY +PEK+IPL +T +I+G V LYGDGQ+VR+WL+V+DH R + L Sbjct: 170 GLDVRVTRCSNNYGPYQYPEKVIPLFVTNLIDGDRVPLYGDGQHVREWLHVDDHCRGIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDI------VFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 VL KG GE YNIGG E N ++ F++G+ E++ + DR G Sbjct: 230 VLDKGEGGEVYNIGGGVELTNRELTERLLAAFDVGW-------------EMVDHMPDRLG 276 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 HDRRY++DS KI++ IG+ P+ + + GL + V WY D+ WWR L E Sbjct: 277 HDRRYSVDSGKIRA-IGYGPRTDFDEGLAEVVRWYRDHQDWWRRLKGE 323 >gi|323357014|ref|YP_004223410.1| dTDP-D-glucose 4,6-dehydratase [Microbacterium testaceum StLB037] gi|323273385|dbj|BAJ73530.1| dTDP-D-glucose 4,6-dehydratase [Microbacterium testaceum StLB037] Length = 332 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 201/336 (59%), Gaps = 24/336 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAGFIGS ++V + V V+DKLTYAGN SL + + + + DI D Sbjct: 3 RLLVTGGAGFIGSNFVHHVVAHTEHTVTVLDKLTYAGNRASLAGLPEDRV-RLVVGDIAD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 62 AAVVDPLVAE--ADAVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLLEAAR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG L D F+E PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 -RHDVRFHHISTDEVYGDLELDDPARFTESTPYNPSSPYSSTKAGSDLLVRAWVRSFGVR 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ +DH A+ +L Sbjct: 170 ATISNCSNNYGPYQHVEKFIPRQITNVLRGIRPKLYGTGENVRDWIHADDHSSAVLTILD 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IG+ Y IG + E+ N +V E+ L +Y + DRPGHD RYAIDS Sbjct: 230 KGEIGQTYLIGADGEKDNKTVV-ELILQLSGQPVDAYD------LVTDRPGHDLRYAIDS 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +K+++E+GW P + ESGL T+ WY DN WW P Sbjct: 283 TKLRTELGWAPTYGDFESGLAATIDWYRDNESWWAP 318 >gi|290962695|ref|YP_003493877.1| dTDP-glucose 4,6-dehydratase [Streptomyces scabiei 87.22] gi|260652221|emb|CBG75354.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces scabiei 87.22] Length = 326 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 156/346 (45%), Positives = 217/346 (62%), Gaps = 27/346 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ------VLVIDKLTYAGNLNSLKEISQSNLFSF 54 M L+VTG AGFIGSA R L+ Q V V+D LTYAG+L++L ++ L +F Sbjct: 1 MNLLVTGAAGFIGSAYVRMLLAGDTAQRGGVSQVTVLDSLTYAGSLDNL-DLGDPRL-TF 58 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DICD + ++ Q D +V+FAAESHVDRSI AD F+ TN+ GT LL+ Sbjct: 59 VRGDICDAPLVDKLMR--QADQMVHFAAESHVDRSIASADAFVRTNVTGTQTLLDAAL-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF+ +STDEVYGS++ G +E P +P+SPY+A+KA+SD L L++ T Sbjct: 115 -------RHGLDRFVHVSTDEVYGSVESGSRTERDPLDPNSPYAASKAASDLLALSYHRT 167 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V ++ CSNNYGP FPEK+IPL +T +++G V LYGDG N RDWL+VEDH A+ Sbjct: 168 HGLDVRVTRCSNNYGPRQFPEKIIPLFLTTLLDGGDVPLYGDGLNRRDWLHVEDHCAAVE 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LV G G YNI G E N E+ L A + +++ +R + DR GHDRRY Sbjct: 228 LVRAGGVAGRVYNISGGIELSN----RELTARLLAAVGATWAR---VRQVPDRKGHDRRY 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 AID +++++E+G+ P+ + ESGL +T WY DN WW PL K +P Sbjct: 281 AIDCTRLRTELGYRPRRDFESGLAETFAWYRDNRDWWEPL-KSRQP 325 >gi|189220406|ref|YP_001941046.1| dTDP-D-glucose 4,6-dehydratase [Methylacidiphilum infernorum V4] gi|189187264|gb|ACD84449.1| dTDP-D-glucose 4,6-dehydratase [Methylacidiphilum infernorum V4] Length = 314 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/283 (50%), Positives = 195/283 (68%), Gaps = 4/283 (1%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F+Q DI D++ + L E + +AIV+FAAESHVDRSI F+ +N++GT+ LLE Sbjct: 10 FEFIQADISDQKRMEQILFEEKIEAIVHFAAESHVDRSIDDPGLFVQSNVVGTYKLLESA 69 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGS--LDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 +++S LS +KK++FRF+ ISTDEVYGS +D E Y PSSPYSA+KA+SD+ V Sbjct: 70 FVYFSSLSPEKKERFRFIHISTDEVYGSIPMDGAPTKEGGLYAPSSPYSASKAASDHFVA 129 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ TYG+P L+++ SNNYGP PEK+IP I +E + +YG G NVRDW+YVEDH Sbjct: 130 AYYKTYGLPALITHSSNNYGPRQHPEKMIPHMICNALEEKQLPVYGQGLNVRDWIYVEDH 189 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDR 287 ++ +L KGR GE Y+IG NI++V +I LLD+ P+S S+ ELIRF+ DR Sbjct: 190 CEGVWKLLLKGRPGEVYHIGKGGGISNIELVKKICALLDSFFPRSSGKSYAELIRFVADR 249 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHD RYA+D SK+K EIGW Q +++ GL KT+ WY++N W Sbjct: 250 PGHDLRYALDVSKMKREIGWQAQVDLDRGLEKTLFWYVENRDW 292 >gi|289644533|ref|ZP_06476606.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca glomerata] gi|289505665|gb|EFD26691.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca glomerata] Length = 333 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 209/336 (62%), Gaps = 22/336 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY + QV+ +D LTYAG ++L ++ +F+ DI D Sbjct: 4 LLVTGAAGFIGSNFVRYWRERHPRDQVVALDALTYAGCRDNLADVLAE--ITFVHGDIRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + S L+E + D +VNFAAESH +I+ +F +TN+IGT LLE R Sbjct: 62 RGLVESLLREHKVDVVVNFAAESHNSLAIIRPGDFFSTNVIGTQTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF QIST EVYG +D G F+ED PY P +PY+A KA D+ V A+G TY +P Sbjct: 113 TVGVARFHQISTCEVYGDMDLDDPGAFTEDSPYLPRTPYNAAKAGGDHAVRAYGLTYDLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NCSNNYGPY FPEK+IPL +TR ++G ++ LY +N R+WL+V DH RA+ VL+ Sbjct: 173 VTITNCSNNYGPYQFPEKVIPLFVTRALQGENLPLYASVRNRREWLHVADHCRAIDAVLE 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+GE Y++G E +I+ + L + +P+S L + DRP HDRRY +DS Sbjct: 233 RGRLGETYHVGSGVE-ADIETIANT-ILAELGLPES-----LKTIVPDRPSHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++++E+GW P+ G+ TV WY DN WWRPL Sbjct: 286 TRLRTELGWAPEIGFADGMRATVAWYRDNEAWWRPL 321 >gi|60418015|dbj|BAD90655.1| polysaccharide synthesis enzyme [Acetobacter tropicalis] Length = 288 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 137/266 (51%), Positives = 179/266 (67%), Gaps = 3/266 (1%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 + F+P A+++ AAESHVDRSI G FI TN++GT+ LLE R +W L + ++ FRF Sbjct: 5 FETFRPHAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSLLEAARKYWLTLDKADREAFRF 64 Query: 129 LQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 ISTDEV+G+L+ F+E PY+P SPYSA+KASSD+LV AW HTYG+P ++N +N Sbjct: 65 HHISTDEVFGALEPNDPPFTETTPYDPRSPYSASKASSDHLVRAWFHTYGLPTFVTNTTN 124 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 NYG +HFPEKLIPL IEG + +YGDG NVRDWL+VEDH AL ++KG GE Y Sbjct: 125 NYGIWHFPEKLIPLITINAIEGKDLPVYGDGANVRDWLFVEDHAEALVKAVEKGVPGETY 184 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSEI 305 IG R N+++V I +LD L P + E LIRF+ DRPGHD RY ID S + + Sbjct: 185 AIGARQPRSNLEVVKTICKVLDELSPDAAGPRERLIRFVSDRPGHDFRYEIDPSHAEQAL 244 Query: 306 GWFPQENMESGLNKTVCWYLDNNWWW 331 W + + E+G+ +TV WYLDN WW Sbjct: 245 DWKAKHDFETGIRRTVQWYLDNRDWW 270 >gi|302335387|ref|YP_003800594.1| dTDP-glucose 4,6-dehydratase [Olsenella uli DSM 7084] gi|301319227|gb|ADK67714.1| dTDP-glucose 4,6-dehydratase [Olsenella uli DSM 7084] Length = 337 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 207/334 (61%), Gaps = 25/334 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS ++V + ++V V+DKLTYAGN ++ + S+ + D+CD Sbjct: 8 ILVTGGCGFIGSNFVHHVVREHPGVRVTVLDKLTYAGNPQNIANLP-SDRVKLVVGDVCD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DA++++AAESH D SI F+ TN+ GT+ LLE R Sbjct: 67 SELLDGLVA--NNDAVIHYAAESHNDNSIQDPSPFVATNVQGTYCLLEACR--------- 115 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG L D F+E+ PY PSSPYS+TKA+SD LV AW TYG+ Sbjct: 116 -KHDVRFHHISTDEVYGDLSLDDPTRFTEETPYRPSSPYSSTKAASDMLVRAWSRTYGVR 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ +DH RA++ +L Sbjct: 175 ATISNCSNNYGPYQHVEKFIPRQITNILCGVRPKLYGDGRNVRDWIHTDDHSRAVWQILT 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE Y IG + ER NID++ EI ++ + + ++ DRPGHDRRYAIDS Sbjct: 235 CGRMGETYLIGADGERSNIDVLREILVVMGRPVDE-------FDWVRDRPGHDRRYAIDS 287 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 +K++ E+GW P + GL +T+ WY ++ WW Sbjct: 288 TKLRRELGWKPLYTDFFQGLARTIAWYSEHRQWW 321 >gi|328955705|ref|YP_004373038.1| dTDP-glucose 4,6-dehydratase [Coriobacterium glomerans PW2] gi|328456029|gb|AEB07223.1| dTDP-glucose 4,6-dehydratase [Coriobacterium glomerans PW2] Length = 339 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 154/334 (46%), Positives = 201/334 (60%), Gaps = 25/334 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGG GFIGS ++V + V V+DKLTYAG ++ + + + DICD Sbjct: 10 IIVTGGCGFIGSNFVHHVVATHPDVHVTVLDKLTYAGRRENIAGLPAERV-ELVVGDICD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DAIV++AAESH D SIL F+ TN+ GTF LLE R Sbjct: 69 TDLLERIVPGH--DAIVHYAAESHNDNSILDPAPFVRTNVEGTFCLLEVAR--------- 117 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEV+G L F ED PY PSSPYS+TKASSD +V AW T+G+ Sbjct: 118 -KHDIRFHHISTDEVFGDLALDCPDRFCEDTPYRPSSPYSSTKASSDLIVRAWHRTFGVR 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++EG LYG G+NVRDW++ EDH RA++ VL Sbjct: 177 ATISNCSNNYGPYQHIEKFIPRQITNILEGIRPKLYGTGENVRDWVHTEDHSRAVWEVLT 236 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + E+ NID+ L +++ + + ++ DRPGHDRRYAID+ Sbjct: 237 RGRIGETYLIGADGEKSNIDV-------LRSILERMGRPADEFDWVRDRPGHDRRYAIDA 289 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 SK+ E+GW P + GL+ T+ WY DN WW Sbjct: 290 SKLTRELGWSPVHTDFSEGLDATIAWYRDNRAWW 323 >gi|223940891|ref|ZP_03632715.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223890443|gb|EEF56980.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 253 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 141/249 (56%), Positives = 179/249 (71%), Gaps = 6/249 (2%) Query: 84 SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDK- 142 SHVDRSI G +FI TNI+GTF LLE R +W +DK RF ISTDEVYGSL Sbjct: 1 SHVDRSITGPGDFIQTNIVGTFNLLEACRGFWGTDLKDK----RFHHISTDEVYGSLGAT 56 Query: 143 GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI 202 G F E PY P+SPYSA+KASSD LV A+ HTYG+P +++NCSNNYGP+ FPEKLIP+ I Sbjct: 57 GYFLETTPYAPNSPYSASKASSDLLVRAYHHTYGLPTVITNCSNNYGPFQFPEKLIPVVI 116 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE 262 ++ + +YGDG NVRDWLYV DH +AL+ VL +G+ GE YN+GG+NE NI IV Sbjct: 117 QSVLARQPIPVYGDGLNVRDWLYVRDHAQALWQVLTRGKEGETYNVGGHNEWANIHIVQL 176 Query: 263 IGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 I L+D L P+ ++ +LI +++DRPGHDRRYAID+++IK+E+GW P E G+ +TV Sbjct: 177 ICDLIDELAPQVGGNSRQLITYVKDRPGHDRRYAIDATRIKNELGWVPAHTFEQGIRETV 236 Query: 322 CWYLDNNWW 330 WYLDN W Sbjct: 237 QWYLDNQPW 245 >gi|763511|gb|AAA99939.1| dTDP-glucose dehydratase [Streptomyces violaceoruber] gi|4218549|emb|CAA09638.1| putative dTDP-glucose-4,6-dehydratase [Streptomyces violaceoruber] Length = 321 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 211/337 (62%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTG AGFIGS R ++ + V V+D+LTYAG ++L E F+ Sbjct: 1 MRLLVTGAAGFIGSHYVREILAGSYPESDDVHVTVVDRLTYAGRRDNLPE--HHERLDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICDR+ + L DA+V+FAAESHVDRS+ G EF+ TN++GT LL+ Sbjct: 59 HGDICDRDLLDRVLPGH--DAVVHFAAESHVDRSLTGPGEFVRTNVMGTQQLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L R L +STDEVYGSLD G ++ED P P+SPY+A+KAS+ + + Sbjct: 111 AALHAGVD---RVLHVSTDEVYGSLDSGTWTEDSPLLPNSPYAASKASTTWSAAPTTVRH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP PEKLIP +TR++ G V LYGDG+NVR+WL+V+DH RAL L Sbjct: 168 GLDVRITRCSNNYGPRQHPEKLIPNFVTRLLTGRQVPLYGDGRNVREWLHVDDHCRALQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KGR GE YNIGG + N ++ + LL A +++R +EDR GHD RYA Sbjct: 228 VLTKGRAGEIYNIGGGSGMSNREMTARLLDLLGA-------DWDMVRHVEDRLGHDFRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ID SKI+ E+G+ P+ ++ESGL V WY D+ +WR Sbjct: 281 IDDSKIREELGYAPRWSIESGLGAVVDWYRDHPDFWR 317 >gi|42543508|pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 155/339 (45%), Positives = 205/339 (60%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ +V+V+D LTYAGN +L + F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + L+ DAIV+FAAESHVDRSI GA F TN+ GT LL+ Sbjct: 61 HGDIRDAGLLARELRGV--DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C R + +STDEVYGS+D G ++E P P+SPY+A+KA SD + A+ TY Sbjct: 113 -CAVD--AGVGRVVHVSTDEVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C NNYGPY PEKLIPL +T +++G + LYGDG NVR+W++ +DH R + L Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N ++ G LLD+L S +R + DR GHD RY+ Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELT---GILLDSLGADWSS----VRKVADRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D KI+ E+G+ PQ + GL +TV WY +N WW PL Sbjct: 283 LDGGKIERELGYRPQVSFADGLARTVRWYRENRGWWEPL 321 >gi|158313931|ref|YP_001506439.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EAN1pec] gi|158109336|gb|ABW11533.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EAN1pec] Length = 347 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 209/336 (62%), Gaps = 22/336 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L +V+ +D LTYAG +L ++ +F+ DI D Sbjct: 17 LLVTGAAGFIGSNFVRYWLGTHPGDRVIALDALTYAGCRENLADLEDG--ITFVHGDIRD 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE I S L+E + D +VNFAAESH +I+ EF +TN++GT LLE R Sbjct: 75 RELIESTLREHRVDVVVNFAAESHNSLAIIRPGEFFSTNVMGTQTLLEAAR--------- 125 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF QIST EVYG +D G F+ED PY P +PY+A KA SD+ V ++G TYG+P Sbjct: 126 TVGVARFHQISTCEVYGDMDLDDPGAFTEDSPYLPRTPYNAAKAGSDHAVRSYGFTYGLP 185 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NCSNNYGP+ FPEK+IPL +TR ++G + LY +N R+WL+V DH RA+ VL+ Sbjct: 186 VTITNCSNNYGPFQFPEKVIPLFVTRALQGQSLPLYASTKNRREWLHVVDHCRAIEAVLE 245 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G +GE Y++G E +I+ + ++ L + +P S L + DRP HDRRY +DS Sbjct: 246 RGTVGETYHVGSGIE-ADIETIADL-ILGELGLPAS-----LKTIVPDRPSHDRRYLLDS 298 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++ +GW P+ + G+ T+ WY DN WWRPL Sbjct: 299 GKLRTTLGWEPRISFADGMKATIGWYRDNEAWWRPL 334 >gi|111223942|ref|YP_714736.1| dTDP-glucose 4,6-dehydratase [Frankia alni ACN14a] gi|111151474|emb|CAJ63191.1| dTDP-glucose 4,6-dehydratase [Frankia alni ACN14a] Length = 334 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 205/336 (61%), Gaps = 22/336 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY V+ +D LTYAG +L ++++ +F+ DI D Sbjct: 4 LLVTGAAGFIGSNFVRYWRERHPADAVVALDALTYAGCRENLDDLAER--ITFVHGDIRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE I S L+E D IVNFAAESH +I+ +F +TN+ GT LLE R Sbjct: 62 RELIESTLREHTVDVIVNFAAESHNSLAIIRPGDFFSTNVTGTQTLLEAARTVGVA---- 117 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF QIST EVYG +D G F+ED PY P +PY+A KA D+ V A+G+TY +P Sbjct: 118 -----RFHQISTCEVYGDMDLNDPGAFTEDAPYLPRTPYNAAKAGGDHAVRAYGYTYDLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NCSNNYGPY FPEK+IPL +TR ++G + LY N R+WL+V DH RA+ VL Sbjct: 173 VTITNCSNNYGPYQFPEKVIPLFVTRALQGEQLPLYASTTNRREWLHVMDHCRAIDAVLD 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+GE Y++G E +I+ + + L + +P S L + DRP HDRRY +DS Sbjct: 233 RGRVGETYHVGSGVE-ADIETIADT-VLAELGLPAS-----LKTIVPDRPSHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW P + G+ T+ WY +N WWRPL Sbjct: 286 TKLRTELGWSPLIDFSEGMRSTIAWYKENEAWWRPL 321 >gi|323141611|ref|ZP_08076494.1| dTDP-glucose 4,6-dehydratase [Phascolarctobacterium sp. YIT 12067] gi|322413953|gb|EFY04789.1| dTDP-glucose 4,6-dehydratase [Phascolarctobacterium sp. YIT 12067] Length = 320 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/311 (50%), Positives = 202/311 (64%), Gaps = 22/311 (7%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 +++ +DKLTYAGNL++LK + FSF+Q DICDRE + +E PD +VNFAAESHV Sbjct: 9 RIICLDKLTYAGNLSTLKPVMDKPNFSFVQTDICDREAVDKLFEEEHPDIVVNFAAESHV 68 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL----DK 142 DRSI F+ TNI+G L++ R K R+ QISTDEVYG L + Sbjct: 69 DRSIENPGIFLQTNIMGAATLMDACR---------KYGIRRYHQISTDEVYGDLTLSAEA 119 Query: 143 GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI 202 F+E PSSPYS++KAS+D LV+A+ TYG+PV +S CSNNYG Y FPEKLIPL I Sbjct: 120 KPFTEKALLRPSSPYSSSKASADLLVMAYHRTYGLPVSISRCSNNYGTYQFPEKLIPLMI 179 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE 262 + + +YG+G NVRDWLYVEDH +A+ L++ KGR+GE YNIGGNNE +NIDIV Sbjct: 180 VNALSDKPLPVYGEGLNVRDWLYVEDHCKAIDLIIHKGRVGEVYNIGGNNEMRNIDIV-- 237 Query: 263 IGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 LI K E LI + DR GHD RYAID +KI +E+GW P+ G+ KT+ Sbjct: 238 ------KLICKELGKPESLITHVTDRKGHDMRYAIDPTKIHNELGWLPKTKFADGIKKTI 291 Query: 322 CWYLDNNWWWR 332 WYL+N WW+ Sbjct: 292 KWYLENQKWWQ 302 >gi|310780095|ref|YP_003968427.1| dTDP-glucose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] gi|309749418|gb|ADO84079.1| dTDP-glucose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] Length = 386 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 161/373 (43%), Positives = 225/373 (60%), Gaps = 49/373 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIG+ +Y++ KI ++++DKLTYAGNL ++K+ + SF++ DICD Sbjct: 5 LITGGAGFIGANFLKYMLKKYEKINIIILDKLTYAGNLENIKDNLEDPRVSFIKGDICDS 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ D +VNFAAESHVD+SI F+ TNI+GT +LL+ + WS + +K Sbjct: 65 DMVGKIFQQENIDYVVNFAAESHVDKSIENPGIFLKTNIMGTQVLLDAAKEHWSFGTDEK 124 Query: 123 -----KDQFRFLQISTDEVYGSLD-------------------------------KGLFS 146 + +F+QISTDEVYG L K F+ Sbjct: 125 GYPLYTEGKKFVQISTDEVYGDLKIDYPDGKKLKVRCEEIEELLKIRPVIPKTFGKDFFT 184 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E NP SPYSA+KAS+D LV A+ TY IPV ++ CSNNYGPY FPEKLIP+ I +I Sbjct: 185 EKTSINPRSPYSASKASADMLVRAYHETYHIPVNITRCSNNYGPYQFPEKLIPVIIKNII 244 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 +G + +YG+G+ VRDWLYVEDH R + +V+ GR GE YNIGG NE +NIDI I Sbjct: 245 KGKKIPIYGNGRQVRDWLYVEDHCRGIDMVINNGRDGEVYNIGGFNEEQNIDIARIIIDK 304 Query: 267 LDALI---PKSYS---------HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 L +I PK + + +LI F++DR GHD RYAID +K E+G++P+ + Sbjct: 305 LYCVIKENPKYQTILKTDLKTINYDLITFVKDRLGHDVRYAIDPNKTVKELGFYPETDFS 364 Query: 315 SGLNKTVCWYLDN 327 G+ KT+ WYL+N Sbjct: 365 LGIEKTIIWYLEN 377 >gi|305679689|ref|ZP_07402499.1| dTDP-glucose 4,6-dehydratase [Corynebacterium matruchotii ATCC 14266] gi|305660309|gb|EFM49806.1| dTDP-glucose 4,6-dehydratase [Corynebacterium matruchotii ATCC 14266] Length = 361 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 151/350 (43%), Positives = 209/350 (59%), Gaps = 31/350 (8%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ R L + ++ V+DKLTYAGN ++L + F+Q D+ Sbjct: 28 MKMLVTGGAGFIGTNFVRRTLTTRPEYEITVLDKLTYAGNSSNLTGLD----VHFVQGDV 83 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + +K D +V+FAAE+HVD S+ F+ +N++GTF LLE R Sbjct: 84 ADRELVDKLVK--ASDVVVHFAAETHVDASLRDPAAFVHSNVVGTFALLEAIR------- 134 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R ISTDEV+G L D F+E PYNPSSPYSATKA +D+LV AW ++ Sbjct: 135 ---KYDTRLHYISTDEVFGDLELTDSRRFTETSPYNPSSPYSATKAGADHLVRAWIRSFN 191 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP LS+CSNNYGPY EK IP IT ++ LYG G +RDW++V+DH A+ L+ Sbjct: 192 IPATLSHCSNNYGPYQHIEKFIPRQITNILTHRTPKLYGTGAQIRDWIHVDDHNSAVQLI 251 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G IGE Y IG +N+ V + L L P +Y H + DRPGHD+RYA+ Sbjct: 252 LDNGTIGESYIIGADNDHITNKQVISLICELMGLSPDAYEH------VSDRPGHDQRYAM 305 Query: 297 DSSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 DS+K+++E+GW P M +GL +T+ WY +N WW PL +++ + Sbjct: 306 DSTKLRTELGWQPHFTDTNTGMRTGLAETITWYTENRAWWEPLKAQVEAN 355 >gi|288920570|ref|ZP_06414876.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EUN1f] gi|288348063|gb|EFC82334.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EUN1f] Length = 334 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 211/336 (62%), Gaps = 22/336 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L +V+ +D LTYAG +L +I +F+ DI D Sbjct: 4 LLVTGAAGFIGSNFVRYWLGTHPGDRVVALDALTYAGCRENLADIEAG--ITFVHGDIRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I S L+E + D +VNFAAESH +I+ +F +TN++GT LLE R Sbjct: 62 RDRIESLLREHRVDVVVNFAAESHNSLAIIRPGDFFSTNVMGTQALLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF QIST EVYG +D G F+ED PY P +PY+A KA SD+ V A+G+TYG+P Sbjct: 113 TVGVARFHQISTCEVYGDMDLDDPGAFTEDSPYLPRTPYNAAKAGSDHAVRAYGYTYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++NCSNNYGP+ FPEK+IPL +TR ++G + LY +N R+WL+V DH RA+ VL+ Sbjct: 173 ITITNCSNNYGPFQFPEKVIPLFVTRALQGESLPLYASTKNRREWLHVIDHCRAIEAVLE 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G +GE Y++G E +I+ + ++ L + +P S L + DRP HDRRY +DS Sbjct: 233 RGTVGETYHVGSGIE-ADIETIADM-ILGELGLPAS-----LKTIVPDRPSHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SK+++ +GW P+ + G+ T+ WY DN WWRPL Sbjct: 286 SKLRTALGWEPRISFADGMKATIGWYRDNESWWRPL 321 >gi|294633378|ref|ZP_06711937.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. e14] gi|292831159|gb|EFF89509.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. e14] Length = 325 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 149/339 (43%), Positives = 205/339 (60%), Gaps = 25/339 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGFIGSA R L+ + V V+DKLTYAG+L L+ + ++F+ D Sbjct: 4 RILVTGGAGFIGSAYVRALLGPSGPPGVTVTVLDKLTYAGSLARLEPVRTHPRYAFVHGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 +CD +R D IV+FAAESHVDRSI F TN++GT +LL+ + L Sbjct: 64 VCDAPTVRRLAAGH--DEIVHFAAESHVDRSIEDGSGFTLTNVVGTQVLLD------AAL 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F+QISTDEVYGSL +G E+ P PSSPY+A+KA++D + LA T+G+ Sbjct: 116 RHGVRT---FVQISTDEVYGSLPEGAAREEDPLRPSSPYAASKAAADLIALAHHRTHGLD 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C+NN+GPY PEK+IP + ++ G ++ +YGDG+ VRDWL+V+DHVRA+ LV Sbjct: 173 VRVTRCTNNFGPYQHPEKVIPRFVATLLTGGNLPMYGDGRQVRDWLHVDDHVRAVELVRT 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLD--ALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GR GE YNIGG N+++ G LLD P H + DR GHDRRYA+ Sbjct: 233 TGRPGEVYNIGGGTALTNLELA---GRLLDWCGAGPDRIEH------VADRKGHDRRYAV 283 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 D KI +E+G+ P+ L T WY + WW PL+ Sbjct: 284 DDGKITTELGYRPRTAFTPALTATADWYRTHRDWWEPLF 322 >gi|239907496|ref|YP_002954237.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] gi|239797362|dbj|BAH76351.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] Length = 340 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 211/336 (62%), Gaps = 23/336 (6%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQS---NLFSFLQ 56 MRL+VTGG GFIGS R L I ++ +D LTYAGN SL ++ + + + F++ Sbjct: 1 MRLLVTGGCGFIGSNFIRDMLTRHEGISIVNLDLLTYAGNRQSLADVEAAFGGSRYHFVR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI + E L+E + +A+VNFAAESHVDRSI A F+ TN++G LL+ R + Sbjct: 61 GDIANSELALYLLEEHKIEAVVNFAAESHVDRSITDATPFVQTNVLGAQSLLDAARHY-- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ +STDEVYG+L G FSE P P+SPYSA+KA +D L+ A T+ Sbjct: 119 -------GVRRFVHVSTDEVYGTLGPDGKFSEATPLAPNSPYSASKAGADMLMRAAYETF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ CSNNYGPY FPEKLIPL ++ + + +YGDG NVRDW+YV DH R + L Sbjct: 172 GMDVVVTRCSNNYGPYQFPEKLIPLMYSKAMADEALPVYGDGLNVRDWIYVIDHCRGVEL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRY 294 L KGR GE YN GG+ E+ NI++V I L AL P+S LIR++ DRPGHDRRY Sbjct: 232 ALMKGRPGEVYNFGGDAEKPNIEVVRTI---LAALGKPES-----LIRYVTDRPGHDRRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+D +K E+G+ P + G+ +T+ WY N W Sbjct: 284 AMDFTKAARELGFAPAWDFTRGIAETMAWYRANGDW 319 >gi|218506943|ref|ZP_03504821.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli Brasil 5] Length = 216 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 1/214 (0%) Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 SLK + + + FL DICDR ++ A F+PD +++ AAESHVDRSI GA +FI TNI Sbjct: 3 SLKSVESAPNYQFLHADICDRARMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNI 62 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSAT 160 +GTF LL+ R +W L +K FRFL +STDEVYGSL D+GLF E PY+PSSPYSA+ Sbjct: 63 VGTFSLLDAARHYWDGLDARRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSAS 122 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 KA+SD+L +AW TYG+PV++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NV Sbjct: 123 KAASDHLAIAWHRTYGLPVVVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANV 182 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNER 254 RDWLYVEDH RAL+ + +GR GE+YN+GG NER Sbjct: 183 RDWLYVEDHARALFTIASRGRPGEKYNVGGRNER 216 >gi|154687907|ref|YP_001423068.1| SpsJ [Bacillus amyloliquefaciens FZB42] gi|154353758|gb|ABS75837.1| SpsJ [Bacillus amyloliquefaciens FZB42] Length = 315 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 206/327 (62%), Gaps = 20/327 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG + ++ + Q+ V+D LTYA ++ + ++ F F++ DI ++E Sbjct: 6 LITGGAGFIGLTFTKMMLKETDAQITVLDNLTYASRPLEIEALKKNGRFRFIKGDISEKE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I + DA+++FAAESHVDRSI A+ FITTN++GT+ L + + Q K Sbjct: 66 DIDKVFSQMY-DAVIHFAAESHVDRSINQAEPFITTNVMGTYRLAD-------AVLQGKA 117 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + ISTDEVYG L D F+E P +P++PYSA+KASSD LV+++ T+ +P ++ Sbjct: 118 G--RLIHISTDEVYGDLAPDDPAFTETTPLSPNNPYSASKASSDLLVMSYVRTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I + G+ V LYGDG +RDWL+ EDH RA+ LVL+KG Sbjct: 176 TRCSNNYGPYQHHEKMIPTIIRHAVNGTPVPLYGDGMQIRDWLFAEDHCRAIKLVLEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +G+ YNIGG NER N + L + I K E +EDR GHDRRYAI++SK+ Sbjct: 236 LGDIYNIGGGNERTNKE--------LASFIMKELGVEERFAHVEDRKGHDRRYAINASKL 287 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNN 328 K+E+GW E G+ +T+ WY D+ Sbjct: 288 KNELGWRQDVTFEEGMRRTIRWYTDSQ 314 >gi|219849940|ref|YP_002464373.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aggregans DSM 9485] gi|219544199|gb|ACL25937.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aggregans DSM 9485] Length = 342 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 212/334 (63%), Gaps = 19/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y++ +++V DKLTYAGNL +L ++ F F++ DICD Sbjct: 4 LLVTGGAGFIGSNFVHYMLGKYDDYRIVVYDKLTYAGNLANLAPVANDPRFVFVRGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R ++ + D I+NFAAE+HVDRSI+ D + TN+ GT+ LLE R Sbjct: 64 IDAVRETVRTYDIDTIINFAAETHVDRSIMAPDAVVRTNVNGTWALLEVAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF QISTDEVYG++ S E P P SPYSA+KA +++LV A+ TYG+P+ Sbjct: 115 ELKLERFHQISTDEVYGAIPAPRRSREGDPLEPRSPYSASKAGAEHLVYAYYITYGVPIT 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNN GPYH+PEK +PL T I+ + +YGDG VRD+ YV DH A+ +VL KG Sbjct: 175 ITRGSNNIGPYHYPEKAVPLFTTNAIDNLPLPIYGDGLQVRDYQYVLDHCEAIDVVLHKG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +IGE YN+G E NI++ +I LD L H+ LI+ + DR GHDRRYA+D SK Sbjct: 235 QIGEVYNVGTEVETPNIEMARKI---LDIL---GRPHS-LIQHVADRAGHDRRYALDCSK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +GW + + L KTV W+++N WWRP+ Sbjct: 288 LRA-LGWRSRHTFDEALEKTVRWFVENEAWWRPI 320 >gi|309789524|ref|ZP_07684107.1| dTDP-glucose 4,6-dehydratase [Oscillochloris trichoides DG6] gi|308228490|gb|EFO82135.1| dTDP-glucose 4,6-dehydratase [Oscillochloris trichoides DG6] Length = 336 Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 215/334 (64%), Gaps = 19/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y++ +++V D LTYAG + +L++ + F+F++ DICD Sbjct: 4 LLVTGGAGFIGSNFVHYMLEKYPSYRIVVYDALTYAGRMENLEQAKGNPQFAFVRGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R+A+ +Q D I+NFAAE+HVDRSIL D + TN+ GT+ LLE R Sbjct: 64 LEAVRAAVDAYQIDTIINFAAETHVDRSILAPDAVVRTNVNGTWALLEVAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ RF QISTDEVYG++ + S E P SPYSA+KA +++LV A+ TYG+PV Sbjct: 115 ERKLERFHQISTDEVYGTIPEPKRSREGDPLEARSPYSASKAGAEHLVYAYFITYGLPVT 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNN GP+H+PEK +PL T ++ + +YGDG+ VRD+ +V DH + LVL KG Sbjct: 175 TTRGSNNIGPFHYPEKAVPLFTTNALDDLPLPIYGDGRQVRDYQFVLDHCEGIDLVLHKG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YN+G E NI++ +I LD ++ K YS LI+ + DR GHDRRYA+D SK Sbjct: 235 ALGEIYNVGTEVETPNIEMAHKI---LD-ILGKPYS---LIQHVTDRAGHDRRYALDCSK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +GW N + L +TV WY++N WWRP+ Sbjct: 288 LRA-LGWRSSHNFDQALERTVRWYVENEAWWRPI 320 >gi|3789898|gb|AAC68681.1| TDP-glucose-4,6-dehydratase [Streptomyces venezuelae] Length = 337 Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 205/339 (60%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ +V+V+D LTYAGN +L + F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + L+ DAIV+FAAESHVDRSI GA F TN+ GT LL+ Sbjct: 61 HGDIRDAGLLARELRGV--DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C R + +STDEVYGS+D G ++E P P+SPY+A+KA SD + A+ TY Sbjct: 113 -CAVD--AGVGRVVHVSTDEVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C NNYGPY PEKLIPL +T +++G + LYGDG NVR+W++ +DH R + L Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N ++ G LLD+L S +R + DR GHD RY+ Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELT---GILLDSLGADWSS----VRKVADRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D +I+ E+G+ PQ + GL +TV WY +N WW PL Sbjct: 283 LDGGEIERELGYRPQVSFADGLARTVRWYRENRGWWEPL 321 >gi|27753572|dbj|BAC55206.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. TP-A0274] Length = 334 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 149/340 (43%), Positives = 210/340 (61%), Gaps = 23/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS R + ++ VL DKLTYAGNL +L+ + F+F+ DI Sbjct: 1 MKILVTGGAGFIGSHFVRSYADQDELTVL--DKLTYAGNLANLEPVEGR--FTFVHGDIG 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +VNFAAESHVDRSI ADEF+ +N++G L+ +CL Sbjct: 57 DAALVAEVVPGH--DLVVNFAAESHVDRSIADADEFVHSNVLGVQTLMR------ACLDA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + +STDEVYGS+D G + E P NP+SPY+A KA D + LA T+G+PV Sbjct: 109 GTP---RVVHVSTDEVYGSIDTGSWDETAPLNPNSPYAAAKAGGDLIALAHARTHGLPVS 165 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ C NNYGPY +PEK+IPL +T +++G V LYGDG NVRDW++V+DH RA+ LV ++G Sbjct: 166 ITRCGNNYGPYQYPEKVIPLFVTNLLDGLSVPLYGDGGNVRDWIHVDDHCRAIRLVAERG 225 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE Y+I G E N+D+ + LDA + E +R DR HDRRY++ ++ Sbjct: 226 EPGEVYHIAGTAELTNMDLTTRLLNALDA----DWRSVEKVR---DRKAHDRRYSLTDAR 278 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +++ +G + E GL +T+ WY DN WW PL K +P Sbjct: 279 LRA-LGHRSRIPFEEGLVETIEWYTDNRAWWEPLKKRARP 317 >gi|312198643|ref|YP_004018704.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EuI1c] gi|311229979|gb|ADP82834.1| dTDP-glucose 4,6-dehydratase [Frankia sp. EuI1c] Length = 369 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 152/352 (43%), Positives = 211/352 (59%), Gaps = 23/352 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQVDI 59 L+VTG AGFIGS RY +V+ +D LTYAG ++ ++ + L + + DI Sbjct: 34 LLVTGAAGFIGSNFVRYWHAEHPGDRVIGLDSLTYAGLRENVADVLDASGGLVTLVHGDI 93 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + S L E + D IVNFAAESH +IL +F +TN++G LLE R Sbjct: 94 RDRELVESLLSEHKVDTIVNFAAESHNSLAILRPGDFFSTNVMGVQSLLEAAR------- 146 Query: 120 QDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF QIST EVYG LD G F+ED PY P +PY+A KA D+ V A+G+TY Sbjct: 147 --TVGVGRFHQISTCEVYGDLDLDDPGAFTEDSPYLPRTPYNAAKAGGDHAVRAYGYTYD 204 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++NCSNNYGPY FPEK+IPL +TR ++G + LY +N R+WL+V DH RA+ V Sbjct: 205 VPVTITNCSNNYGPYQFPEKVIPLFVTRALQGQELPLYASTKNRREWLHVIDHCRAIEAV 264 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++GR+GE Y++G E +I+ + + L + +P S L + DRP HDRRY + Sbjct: 265 LERGRVGETYHVGSGVE-ADIETIADT-ILTELGLPDS-----LKTIVPDRPSHDRRYLL 317 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWK 348 DSSK+++E+ W PQ G+ T+ W+ DN WWRPL P + + W+ Sbjct: 318 DSSKLRTELDWAPQIEFTDGMRSTIAWFRDNESWWRPLLGR-SPVQETTAWQ 368 >gi|22001238|gb|AAM88357.1|AF521878_8 NbmH [Streptomyces narbonensis] Length = 344 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 153/339 (45%), Positives = 205/339 (60%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ +V+V+D LTYAGN +L + F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAGEVIVLDSLTYAGNRANLAPVEADPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + + L+ DA+V+FAAESHVDRSI GA F TN+ GT LL+ Sbjct: 61 HGDIRDADLLARELRGV--DAVVHFAAESHVDRSIAGASVFTGTNVQGTQTLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C R + +STDEVYGS+D G ++E P P+SPY+A+KA SD + A+ TY Sbjct: 113 -CALD--AGVGRVVHVSTDEVYGSIDSGSWNESSPLEPNSPYAASKAGSDLVARAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C NNYGPY PEKLIPL +T +++G + LYGDG NVR+W++ +DH R + L Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N ++ G LLD+L S +R + DR GHD RY+ Sbjct: 230 VLAGGRAGEVYHIGGGRELTNRELT---GILLDSLGADWSS----VRRVADRQGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D KI+ E+G+ PQ GL +T+ WY +N WW PL Sbjct: 283 LDGGKIERELGYRPQIAFADGLARTIRWYRENRDWWEPL 321 >gi|15077469|gb|AAK83196.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces viridochromogenes] Length = 355 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 214/335 (63%), Gaps = 26/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++V GGAGFIGS R LV D +V V+DKLTYAGNL +L+ ++ ++F+ DICD Sbjct: 14 VLVIGGAGFIGSQYVRELVRDGDPARVTVLDKLTYAGNLANLEPVA--GRYTFVHGDICD 71 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 L E P D +VNFAAESHVDRSI A FI TN+ G L++ CL Sbjct: 72 ARL----LAEVVPGHDLVVNFAAESHVDRSIADAAPFIRTNVQGVQALMQ------VCL- 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R +Q+STDEVYGS++ G + ED P P+SPY+A+KA D + LA+ T+G+PV Sbjct: 121 --EAGTARIVQVSTDEVYGSIETGSWDEDAPIAPNSPYAASKAGGDMVALAYARTHGLPV 178 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C NNYGPY FPEK++PL TR+++G + LYGDG NVRDW++V DHVR + LV ++ Sbjct: 179 SVTRCGNNYGPYQFPEKVVPLFTTRLLDGHSIPLYGDGGNVRDWVHVSDHVRGIRLVAER 238 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G+ Y+I G+ E N+++ + LLDAL + + + + DR GHDRRY++ + Sbjct: 239 GLPGQVYHIAGSAELTNLELTQQ---LLDAL----GAGWDRVERVPDRKGHDRRYSLCDA 291 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ + +G+ P+ + E GL TV WY +N WW PL Sbjct: 292 RLGA-LGYAPRVSFEQGLADTVRWYAENRDWWEPL 325 >gi|239620935|ref|ZP_04663966.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516196|gb|EEQ56063.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 372 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 210/349 (60%), Gaps = 36/349 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++ N + + V+D LTYAG +L + +NL +F+ +I Sbjct: 30 QHILVTGGAGFIGANFVHWVARNHPQAHMTVLDALTYAGKRENLDGVPAANL-TFVHGNI 88 Query: 60 CDRECI---------RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 CD E + RSA DAIV+FAAESH D SIL A F+ TN+ GT++LLE Sbjct: 89 CDAELVESLFSGLNQRSAAAVPPIDAIVHFAAESHNDNSILDASPFLNTNVTGTYVLLEA 148 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYL 167 R + RF ISTDEVYG L ++ F+E PY PSSPYSA+KA+SD+L Sbjct: 149 AR----------RHDIRFHHISTDEVYGDLALDEQRKFTELSPYKPSSPYSASKAASDHL 198 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW T+G+ +SNCSNNYGPY EK IP IT ++ G LYG G VRDW+ VE Sbjct: 199 VRAWHRTHGLKTTISNCSNNYGPYQHVEKFIPRQITNILAGIRPKLYGQGLAVRDWISVE 258 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIE 285 DH A++ +L +GRIGE Y +G N E NID++ I L+ DA + H + Sbjct: 259 DHCSAIWAILTRGRIGETYLVGANGEYNNIDVLHMILKLMGRDA---NDFDH------VN 309 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DRPG D+RYAID++K+++E+GW P+ + E GL T+ WY + WW P Sbjct: 310 DRPGGDKRYAIDATKLQTELGWVPKYTDFEEGLAATIDWYRAHESWWMP 358 >gi|23465806|ref|NP_696409.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum NCC2705] gi|23326499|gb|AAN25045.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum NCC2705] Length = 415 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 211/349 (60%), Gaps = 36/349 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++ N ++ + V+D LTYAG +L + +NL +F+ +I Sbjct: 73 QHILVTGGAGFIGANFVHWVARNHPQVHMTVLDALTYAGKRENLDGVPAANL-TFVHGNI 131 Query: 60 CDRECI---------RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 CD E + RSA DAIV+FAAESH D SIL A F+ TN+ GT++LLE Sbjct: 132 CDAELVESLLSGLNQRSAAAVPPIDAIVHFAAESHNDNSILDASPFLNTNVTGTYVLLEA 191 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYL 167 R + RF ISTDEVYG L ++ F+E PY PSSPYSA+KA+SD+L Sbjct: 192 AR----------RHDIRFHHISTDEVYGDLALDEQRKFTELSPYKPSSPYSASKAASDHL 241 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW T+G+ +SNCSNNYGPY EK IP IT ++ G LYG G VRDW+ VE Sbjct: 242 VRAWHRTHGLKTTISNCSNNYGPYQHVEKFIPRQITNILAGIRPKLYGQGLAVRDWISVE 301 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIE 285 DH A++ +L +GRIGE Y +G N E NID++ I L+ DA + H + Sbjct: 302 DHCSAIWTILTRGRIGETYLVGANGEYNNIDVLHMILKLMGRDA---NDFDH------VN 352 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DRPG D+RYAID++K+++E+GW P+ + + GL T+ WY + WW P Sbjct: 353 DRPGGDKRYAIDATKLQTELGWVPKYTDFKEGLAATIDWYRAHESWWMP 401 >gi|271962202|ref|YP_003336398.1| dTDP-glucose 4,6-dehydratase [Streptosporangium roseum DSM 43021] gi|270505377|gb|ACZ83655.1| dTDP-glucose 4,6-dehydratase [Streptosporangium roseum DSM 43021] Length = 340 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 207/333 (62%), Gaps = 28/333 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++ GGAGFIGS R L D + V V+DKLTYAGN +L+ + F+ DIC Sbjct: 1 MKILIIGGAGFIGSHYVRTLSAD-GVAVTVLDKLTYAGNPANLEGAAHE----FVHGDIC 55 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D L E P + +VNFAAESHVDRSI GA EF+ TN++GT L++ +CL Sbjct: 56 DA----GLLAEVVPGHEVVVNFAAESHVDRSIDGAGEFVRTNVLGTQTLMQ------ACL 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R +Q+STDEVYGS+D G + ED P P SPYSA KA D + LA+ T+G+P Sbjct: 106 DAGTR---RVVQVSTDEVYGSIDTGSWKEDAPVRPRSPYSAAKAGGDMIALAYAVTHGLP 162 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C NNYGP+ +PEK+IPL +T ++ G V LYGDG NVRDW++V+DH + LV + Sbjct: 163 VSITRCGNNYGPHQYPEKVIPLFVTNLLRGRKVPLYGDGGNVRDWIHVDDHCAGIRLVAE 222 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G GE Y+I G E N ++ L+ + +++ +EDR GHDRRY++D Sbjct: 223 RGEPGEVYHIAGTAELTNTELTAR-------LLAACGAGWDMVEHVEDRKGHDRRYSLDD 275 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S++++ +G+ P + GL +TV WY DN WW Sbjct: 276 SRLRA-LGYRPNIPFDQGLAETVRWYADNPDWW 307 >gi|328555487|gb|AEB25979.1| dTDP-glucose 4,6-dehydratase [Bacillus amyloliquefaciens TA208] Length = 315 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 202/323 (62%), Gaps = 20/323 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG ++ + Q+ V+D LTYA ++ + ++ F F++ DI +E Sbjct: 6 LITGGAGFIGLTFTNMMLKETDAQITVLDNLTYASRPLEIEALKKNGRFRFIKGDISKKE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I A + DA+++FAAESHVDRSI A+ FITTN++GT+ L + + Q K Sbjct: 66 DIDKAFSQMY-DAVIHFAAESHVDRSINQAEPFITTNVMGTYRLAD-------AVLQGKA 117 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + ISTDEVYG L D F+E P +P++PYSA+KASSD LV+++ T+ +P ++ Sbjct: 118 G--RLIHISTDEVYGDLEPDDPAFTETTPLSPNNPYSASKASSDLLVMSYVRTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I + G+ V LYGDG +RDWL+ EDH RA+ LVL+KG Sbjct: 176 TRCSNNYGPYQHHEKMIPTIIRHAVNGTPVPLYGDGMQIRDWLFAEDHCRAIKLVLEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +G+ YNIGG NER N D L A I K E +EDR GHDRRYAI+++K+ Sbjct: 236 LGKIYNIGGGNERTNKD--------LAAFIMKELGVEERFAHVEDRKGHDRRYAINATKL 287 Query: 302 KSEIGWFPQENMESGLNKTVCWY 324 K E+GW E G+ +T+ WY Sbjct: 288 KQELGWRQDVTFEEGMRRTIRWY 310 >gi|84617317|emb|CAI94677.1| putative TDP-glucose dehydratase [Streptomyces achromogenes subsp. rubradiris] Length = 338 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 215/349 (61%), Gaps = 25/349 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M+L+VTGGAGFIGS R L+ + ++ V+D L+YAG ++L F+ Sbjct: 1 MKLLVTGGAGFIGSHYVRQLLAGGYPGYEQARITVLDVLSYAGRRDNLP--VDHPRMDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICD + L DA+V+FAAESHVDRS+ A EF+ TN+ GT LLE + Sbjct: 59 QGDICDIPLLLDLLPGH--DAVVHFAAESHVDRSVRSAAEFVRTNVAGTQALLEASV--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ RF+ +STDEVYGS D+G ++ED P P+SPY+A+KAS+D + A+ T+ Sbjct: 114 ------RRGISRFVHVSTDEVYGSTDEGSWTEDAPLLPNSPYAASKASADLITRAYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGPY FPEKLIPL +T ++EG V LYGDG NVR+WL+V DH RA+ Sbjct: 168 GLDVSITRCSNNYGPYQFPEKLIPLFVTNLMEGKPVPLYGDGYNVREWLHVADHCRAVQA 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL G GE YNIGG N+++ + L S +IRF+ DR GHD RYA Sbjct: 228 VLTSGGAGEIYNIGGGTGHTNLELTERLLELCG-------SDRSMIRFVADRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDY 344 +D SKI+ ++G+ P+ + + GL +TV WY DN WW+ + D ++ Sbjct: 281 LDDSKIREQLGYSPRVSFDRGLAETVAWYRDNPGWWKTVDGRRAADGEH 329 >gi|182439722|ref|YP_001827441.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780386|ref|ZP_08239651.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] gi|62896328|emb|CAH94330.1| dTDP-D-glucose 4,6-dehydratase StrE [Streptomyces griseus subsp. griseus] gi|178468238|dbj|BAG22758.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660719|gb|EGE45565.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] Length = 329 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 205/335 (61%), Gaps = 21/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 L+VTG AGFIGS R L+ + V +D LTYAGN ++L + + F + DI Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + D +V+ AAESHVDRS+L A F+ TN+ GT LL+ + Sbjct: 65 CDAALVDRVMA--GQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLD---------A 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+Q+STDEVYGSL+ G ++ED P P+SPYSA+KAS D L LA ++G+ V Sbjct: 114 ATRHGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGP FPEKLIP IT +++G V LYGDG NVR+WL+V+DHVR + V + Sbjct: 174 RVTRCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTR 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR G YNIGG N ++V G LL+A S + ++EDR GHDRRYA+DS+ Sbjct: 234 GRAGRVYNIGGGATLSNKELV---GLLLEAAGADWGS----VEYVEDRKGHDRRYAVDST 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+G+ P ++ GL TV WY + WW PL Sbjct: 287 RIQRELGFAPAVDLADGLAATVAWYHKHRSWWEPL 321 >gi|269794222|ref|YP_003313677.1| dTDP-glucose 4,6-dehydratase [Sanguibacter keddieii DSM 10542] gi|269096407|gb|ACZ20843.1| dTDP-glucose 4,6-dehydratase [Sanguibacter keddieii DSM 10542] Length = 331 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 205/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIGS V D ++V V+D LTYAG+ SL ++ + + +Q DI Sbjct: 1 MRLLVTGGAGFIGSNFVHTTVRDRPDVEVTVLDALTYAGDATSLAPVA--DRVTLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E D +V+FAAESH D S+ F+ TN+IGT+ LLE R Sbjct: 59 TDGALVDRLVGE--SDLVVHFAAESHNDNSLHDPWPFVQTNLIGTYTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ ISTDEVYG L D F+ D PYNPSSPYS+TKA SD LV AW ++G Sbjct: 110 ---KHGVRYHHISTDEVYGDLELDDPAKFTADTPYNPSSPYSSTKAGSDLLVRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP +T +I+G LYG G+NVRDW++VEDH A++ + Sbjct: 167 VQATISNCSNNYGPYQHIEKFIPRQVTNLIDGVRPRLYGAGENVRDWIHVEDHNTAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G+IGE Y IG + E+ N+++V L+ T+ + DR GHD RYAI Sbjct: 227 IDRGQIGETYLIGADGEKNNLEVV-------QTLLEVFGRPTDDFDHVTDRAGHDMRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++++++E+GW P + +GL TV WY N WWRP Sbjct: 280 DATRLRTELGWEPTFTDFGAGLRATVEWYRANEAWWRP 317 >gi|159037932|ref|YP_001537185.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] gi|157916767|gb|ABV98194.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] Length = 357 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 210/342 (61%), Gaps = 30/342 (8%) Query: 1 MRLIVTGGAGFIGSALCRYL----------VNDLKIQVLVIDKLTYAGNLNSLKEISQSN 50 MR++VTGGAGFIGS R L V + V V+DKLTYAGN +L Sbjct: 1 MRILVTGGAGFIGSHYVRSLLAGEYAAEDAVGAVDASVTVLDKLTYAGNRANLPATHPR- 59 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 +F+Q DICD+ +R K DAI++FAAESHVDRS+ G F+ TN +GT +LE Sbjct: 60 -LTFVQGDICDQGLLRDLFKGH--DAILHFAAESHVDRSVDGGATFVRTNALGTQSVLE- 115 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + R + +STDEVYGS++ G ++E P P+SPY+A+KAS+D + + Sbjct: 116 --------AAVAVGVPRVVHVSTDEVYGSIEHGAWTETWPLLPNSPYAASKASADLIARS 167 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + T+G+ V ++ CSNNYGPY PEKL+PL IT ++EG V +YG G NVR+WL+V DH Sbjct: 168 YWRTHGLDVSITRCSNNYGPYQHPEKLVPLFITNLLEGLPVPVYGTGVNVREWLHVADHC 227 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL+ VL +GR GE YN+G NE N+++ + L A +IR++ DR GH Sbjct: 228 RALHRVLTRGRPGEVYNVGSGNELTNLELTERLLHLCGA-------DRSMIRYVTDRKGH 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+RY++D +KI+ +G+ P+ + GL +TV WY DN WW+ Sbjct: 281 DQRYSLDDTKIRECLGYRPRVSFADGLAETVAWYRDNPQWWK 322 >gi|267040|sp|P29782|STRE_STRGR RecName: Full=dTDP-glucose 4,6-dehydratase gi|581677|emb|CAA44444.1| dTDP-glucose dehydratase [Streptomyces griseus] Length = 328 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 152/335 (45%), Positives = 205/335 (61%), Gaps = 22/335 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 L+VTG AGFIGS R L+ + V +D LTYAGN ++L + + F + DI Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD R + D +V+ AAESHVDRS+L A F+ TN+ GT LL+ + Sbjct: 65 CDAPGRRVMAGQ---DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLD---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+Q+STDEVYGSL+ G ++ED P P+SPYSA+KAS D L LA ++G+ V Sbjct: 113 ATRHGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDV 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ CSNNYGP FPEKLIP IT +++G V LYGDG NVR+WL+V+DHVR + V + Sbjct: 173 RVTRCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTR 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR G YNIGG N ++V G LL+A S + ++EDR GHDRRYA+DS+ Sbjct: 233 GRAGRVYNIGGGATLSNKELV---GLLLEAAGADWGS----VEYVEDRKGHDRRYAVDST 285 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +I+ E+G+ P ++ GL TV WY + WW PL Sbjct: 286 RIQRELGFAPAVDLADGLAATVAWYHKHRSWWEPL 320 >gi|256856008|emb|CBB12353.1| RmlB protein [Rhodococcus aetherivorans] Length = 338 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 205/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V D + +V V+DKLTYAGNL SL +++ F++ D+ Sbjct: 1 MRLLVTGGAGFIGANFVHRTVADRPEARVTVLDKLTYAGNLASLDPVAEK--IRFVRGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + + E D +V+FAAESH D S+ F+ TN+IGTF LLE R Sbjct: 59 ADADLVDALVAE--SDLVVHFAAESHNDNSLADPSPFVQTNLIGTFTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ ISTDEVYG L D F+E YNPSSPYS+TKA SD LV AW ++G Sbjct: 110 ---RHSVRYHHISTDEVYGDLELDDPARFTEATAYNPSSPYSSTKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +++G LYG G NVRDW++V+DH RA++ + Sbjct: 167 VAATISNCSNNYGPYQHVEKFIPRQITNVLDGIRPKLYGTGANVRDWIHVDDHNRAVWTI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KG IG+ Y IG + E N +V + ++ F+ DRPGHD RYAI Sbjct: 227 IDKGEIGQTYLIGADGETNNRTVV-------ETILELCGKDRGDFDFVTDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++++++E+GW P+ + GL T+ WY + WWRP Sbjct: 280 DATRLRTELGWTPRYRDFREGLAATIDWYRTHEHWWRP 317 >gi|296454981|ref|YP_003662125.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum JDM301] gi|296184413|gb|ADH01295.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum JDM301] Length = 453 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 156/347 (44%), Positives = 210/347 (60%), Gaps = 36/347 (10%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ ++ N ++ + V+D LTYAG +L + SNL +F+ +ICD Sbjct: 113 ILVTGGAGFIGANFVHWVARNHPQVHMTVLDALTYAGKRENLDGVPASNL-TFVHGNICD 171 Query: 62 RECI---------RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 E + RSA DAIV+FAAE+H D SIL A F+ TN+ GT++LLE R Sbjct: 172 AELVESLFSGLNQRSAAAVPPIDAIVHFAAETHNDNSILDASPFLNTNVTGTYVLLEAAR 231 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + RF ISTDEVYG L + F+E PY PSSPYSA+KA+SD+LV Sbjct: 232 ----------RHDIRFHHISTDEVYGDLALDEPRKFTELSPYKPSSPYSASKAASDHLVR 281 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW T+G+ +SNCSNNYGPY EK IP IT ++ G LYG G VRDW+ VEDH Sbjct: 282 AWHRTHGLKTTISNCSNNYGPYQHVEKFIPRQITNILAGIRPKLYGQGLAVRDWISVEDH 341 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIEDR 287 A++ +L +GRIGE Y +G N E NID++ I L+ DA + H + DR Sbjct: 342 CSAIWTILTRGRIGETYLVGANGEYNNIDVLRMILKLMGRDA---NDFDH------VNDR 392 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 PG D+RYAID++K+++E+GW P+ + E GL T+ WY + WW P Sbjct: 393 PGGDKRYAIDATKLQTELGWVPKYTDFEEGLAATIDWYRAHENWWMP 439 >gi|294787276|ref|ZP_06752529.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens F0305] gi|315227166|ref|ZP_07868953.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens DSM 10105] gi|294484632|gb|EFG32267.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens F0305] gi|315119616|gb|EFT82749.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens DSM 10105] Length = 401 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 152/367 (41%), Positives = 217/367 (59%), Gaps = 49/367 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEI-------------- 46 +++VTGG GFIGS RY ++++ V+D LTYAGNL +L+ + Sbjct: 39 KILVTGGVGFIGSNFVRYTARRYPQVRITVLDALTYAGNLANLEGLLPSGRNASERDGCA 98 Query: 47 ----------SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF 96 ++ +F+ DI DRE + + + + AIV+FAAESH DR+I + F Sbjct: 99 QDDSGHDTSDQDASCLTFVHGDIRDRELLENLVPGHE--AIVHFAAESHNDRAIADPEPF 156 Query: 97 ITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNP 153 I+TN++GT+ LLE R+ ++ RF ISTDEVYG L + FSE PY P Sbjct: 157 ISTNVVGTYRLLEAARV----------NKIRFHHISTDEVYGDLPLDSREKFSEVSPYRP 206 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 SSPYSA+KA+SD LV+AW TYG+ +SNCSNNYGPY EK IP IT ++EG + + Sbjct: 207 SSPYSASKAASDQLVMAWQRTYGLEATISNCSNNYGPYQHVEKFIPRQITSILEGIPLQI 266 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 YGDG VRDW+ VED A++ +L +GR G+ Y I + ER N+ I+ I L+ P+ Sbjct: 267 YGDGSAVRDWISVEDQCSAIWAILNRGRSGQTYVISADGERSNLRIMDMIQALMGDHTPR 326 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 + DRPG DRRYA+DS+KI++E+GW P+ ++E+GL T+ WY + WW+ Sbjct: 327 VS--------VPDRPGADRRYALDSTKIRTELGWRPRHADLEAGLKTTIAWYESHRSWWK 378 Query: 333 PLYKELK 339 +E + Sbjct: 379 AQKEETE 385 >gi|326383446|ref|ZP_08205133.1| dTDP-glucose 4,6-dehydratase [Gordonia neofelifaecis NRRL B-59395] gi|326197852|gb|EGD55039.1| dTDP-glucose 4,6-dehydratase [Gordonia neofelifaecis NRRL B-59395] Length = 334 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/344 (43%), Positives = 208/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ R L + Q+ V+DK TYA N +L+ ++ + ++ DI Sbjct: 1 MRVLVTGGAGFIGANFVLRTLATRPEAQLTVLDKFTYAANPATLEAVA--DRVRVVRGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + ++E D +VNFAAESH D S+ F+ TN++GT+ LLE R Sbjct: 59 ADASTVDALVRE--SDLVVNFAAESHNDNSLADPSAFVQTNLVGTYTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF +STDEVYG L D F+E+ YNPSSPYSATKA SD LV AW ++G Sbjct: 110 ---RHGVRFHHVSTDEVYGDLELDDPARFTEETAYNPSSPYSATKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++V+DH A++ + Sbjct: 167 AAATISNCSNNYGPYQHIEKFIPRQITNVLTGVRPKLYGDGRNVRDWIHVDDHNDAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G+IGE Y IG + E N +V +A++ + F+ DR GHDRRYAI Sbjct: 227 IDRGQIGETYLIGADGEADNRTVV-------EAILTALGQPADAFDFVTDRAGHDRRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 DS ++++E+GW P+ + SGL T+ WY DN WW P +++ Sbjct: 280 DSRRLRAEVGWQPRYVDFTSGLAATIDWYRDNRDWWAPRKADVE 323 >gi|325289675|ref|YP_004265856.1| dTDP-glucose 4,6-dehydratase [Syntrophobotulus glycolicus DSM 8271] gi|324965076|gb|ADY55855.1| dTDP-glucose 4,6-dehydratase [Syntrophobotulus glycolicus DSM 8271] Length = 327 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 209/332 (62%), Gaps = 13/332 (3%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS R +L + +V+ DKLTYAGN+ +++++ + + F++ DICD Sbjct: 4 ILVTGGAGFIGSNYIRLFLQTNKDDKVINYDKLTYAGNIENIQDLDSNPRYCFVKGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +KE+ PD ++NFAAESHVDRSI F TNI+GT +L+ + +W + Sbjct: 64 EKHFTKIIKEYDPDYVINFAAESHVDRSIDDPSIFGDTNIMGTLNILQCLKNFWKKSNDQ 123 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +FLQISTDEVYGSL D F+E P+SPYSA+KA +D +V A+ TYG P Sbjct: 124 NK---KFLQISTDEVYGSLENDDDSFTESSLLMPNSPYSASKAGADLMVRAFVKTYGFPA 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ CSNNYGP+ EK IP I + ++ + +YGDG N+R+W++V DH A+ VL K Sbjct: 181 MITRCSNNYGPFQNAEKFIPSCIIKALKDEAITIYGDGTNIREWIHVNDHCAAITKVLLK 240 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YNIG +E NI E+ L+ + K T I I DRPGHDRRYA+DS Sbjct: 241 GKLGEVYNIGSGDEVSNI----EMARLILKHLGK---ETGRIEKITDRPGHDRRYALDSK 293 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KI E+ W +E G+ +T+ WY +N WW Sbjct: 294 KIAGELDWKCSYQLEKGIKETISWYQNNRAWW 325 >gi|228946126|ref|ZP_04108461.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813539|gb|EEM59825.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 299 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 153/307 (49%), Positives = 200/307 (65%), Gaps = 17/307 (5%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 Q++ +D LTYAGNL++LKEIS + + F++ DI + I K+ + D ++NFAAESHV Sbjct: 9 QIVNVDLLTYAGNLSNLKEISLNQNYKFIKGDISNEIFIDKLFKKEKFDYVLNFAAESHV 68 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLF 145 DRSI F+ TNI+GT LL S K +F+QISTDEVYG+L + G F Sbjct: 69 DRSIKNPHIFVLTNILGTQALLH---------SAYKAKVKKFVQISTDEVYGTLSQTGAF 119 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +E P+SPYSA+KAS+D +V A+ TYG+P+ ++ CSNNYGPY F EKLIPL IT Sbjct: 120 TEHSIIAPNSPYSASKASADLMVRAYHETYGLPMNITRCSNNYGPYQFTEKLIPLTITLA 179 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 + + LYGDG ++RDWL+VEDH A+ LVL GR G YNIGG+NE N+DIV +I Sbjct: 180 LNNKDIPLYGDGLHIRDWLHVEDHCVAIDLVLHGGRDGHIYNIGGDNEYTNLDIVQKILK 239 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 L+ K S I FI DR GHDRRYA+DS+K+K E+ W PQ GL +T+ WY+ Sbjct: 240 FLN----KDQSQ---ITFISDRLGHDRRYAMDSTKLKKELSWKPQYLFNDGLTQTIKWYI 292 Query: 326 DNNWWWR 332 DN WW Sbjct: 293 DNRTWWE 299 >gi|86740374|ref|YP_480774.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CcI3] gi|86567236|gb|ABD11045.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CcI3] Length = 357 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 205/336 (61%), Gaps = 22/336 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY + V+ +D LTYAG +L +++ + +F+ DI D Sbjct: 27 LLVTGAAGFIGSNFVRYWRTRHPEDAVVALDALTYAGCRENLADVA--DRVTFVHGDIRD 84 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + S L+E D +VNFAAESH +I+ EF TN++GT LLE R Sbjct: 85 QELVESVLREHSVDVVVNFAAESHNSLAIIRPGEFFATNVMGTQTLLEAAR--------- 135 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF QIST EVYG +D G F+ED PY P +PY+A KA D+ V A+G TY +P Sbjct: 136 TVGVARFHQISTCEVYGDMDLNDPGAFTEDSPYLPRTPYNAAKAGGDHAVRAYGFTYNLP 195 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++NCSNNYGPY FPEK+IPL +TR ++G + +Y N R+WL+V DH RA+ VL Sbjct: 196 VTITNCSNNYGPYQFPEKVIPLFVTRALQGESLPMYASTTNRREWLHVMDHCRAIDAVLD 255 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GR+GE Y++G E +I+ + + L + +P S L + DRP HDRRY +DS Sbjct: 256 RGRLGETYHVGSGVE-ADIETIADT-VLAELGLPAS-----LKTIVPDRPSHDRRYLLDS 308 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K+++E+GW P + G+ T+ WY +N WWRPL Sbjct: 309 TKLRTELGWTPLIDFAEGMRSTIAWYKENEAWWRPL 344 >gi|308175509|ref|YP_003922214.1| spore coat polysaccharide synthesis protein SpsJ [Bacillus amyloliquefaciens DSM 7] gi|307608373|emb|CBI44744.1| spore coat polysaccharide synthesis protein SpsJ [Bacillus amyloliquefaciens DSM 7] gi|328913858|gb|AEB65454.1| spore coat polysaccharide synthesis protein SpsJ [Bacillus amyloliquefaciens LL3] Length = 315 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 206/324 (63%), Gaps = 22/324 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG ++ + Q+ V+D LTYA ++ + ++ F F++ DI +E Sbjct: 6 LITGGAGFIGLTFTNMMLKETDAQITVLDNLTYASRPLEIEALKKNGRFRFIKGDISKKE 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I A + DA+++FAAESHVDRSI A+ FITTN++GT+ L + + Q K Sbjct: 66 DIDKAFSQMY-DAVIHFAAESHVDRSINQAEPFITTNVMGTYRLAD-------AVLQGKA 117 Query: 124 DQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + ISTDEVYG L D F+E P +P++PYSA+KASSD LV+++ T+ +P ++ Sbjct: 118 G--RLIHISTDEVYGDLGPDDPAFTETTPLSPNNPYSASKASSDLLVMSYVKTHKLPAII 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNNYGPY EK+IP I + G+ V LYGDG +RDWL+ EDH RA+ LVL+KG Sbjct: 176 TRCSNNYGPYQHHEKMIPTIIRHAVNGTPVPLYGDGMQIRDWLFAEDHCRAIKLVLEKGT 235 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YNIGG NER N D+ F++ L + ++H +EDR GHDRRYAI+++K Sbjct: 236 LGEIYNIGGGNERTNKDLA---AFIMKELGVEGRFAH------VEDRKGHDRRYAINATK 286 Query: 301 IKSEIGWFPQENMESGLNKTVCWY 324 +K E+GW E G+ +T+ WY Sbjct: 287 LKQELGWRQDVTFEEGMRRTIRWY 310 >gi|311070293|ref|YP_003975216.1| putative dTDP-glucose 4,6-dehydratase [Bacillus atrophaeus 1942] gi|310870810|gb|ADP34285.1| putative dTDP-glucose 4,6-dehydratase [Bacillus atrophaeus 1942] Length = 316 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 205/327 (62%), Gaps = 19/327 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIG + ++ + ++ V DKLTYA + ++++ ++ F F++ DI + Sbjct: 5 FLITGGAGFIGLTFTKLMLKETDARITVFDKLTYASHPKEMEKLKGNSRFRFIKGDISSQ 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I A E D +++FAAESHVDRSI A+ FITTN++GT+ RL + L Sbjct: 65 ADIDRAFDE-SYDVVIHFAAESHVDRSISQAEPFITTNVMGTY------RLAEAVLHGKA 117 Query: 123 KDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + ISTDEVYG L D F+E P +P++PYSA+KASSD LV ++ T+ +P + Sbjct: 118 K---KLIHISTDEVYGDLEADDPAFTETTPLSPNNPYSASKASSDLLVQSYVKTHQLPAI 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ CSNNYGPY EK+IP I +G V LYGDG +RDWL+ EDH RA+ L+L+KG Sbjct: 175 ITRCSNNYGPYQHREKMIPTIIRHAAKGQPVPLYGDGLQIRDWLFAEDHCRAIKLILEKG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YNIGG NER N + L A++ EL +EDR GHDRRYAI++SK Sbjct: 235 TNGEVYNIGGGNERTNKE-------LASAILKHLGCDQELFAHVEDRKGHDRRYAINASK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDN 327 +K+E+GW + E G+ +TV WY DN Sbjct: 288 LKNELGWRQEVTFEEGIKRTVRWYTDN 314 >gi|42543509|pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/339 (45%), Positives = 205/339 (60%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L+ +V+V+D LTYAGN +L + F+ Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + L+ DAIV+FAAESHVDRSI GA F TN+ GT LL+ Sbjct: 61 HGDIRDAGLLARELRGV--DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQ------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C R + +ST++VYGS+D G ++E P P+SPY+A+KA SD + A+ TY Sbjct: 113 -CAVD--AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C NNYGPY PEKLIPL +T +++G + LYGDG NVR+W++ +DH R + L Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N ++ G LLD+L S +R + DR GHD RY+ Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELT---GILLDSLGADWSS----VRKVADRKGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D KI+ E+G+ PQ + GL +TV WY +N WW PL Sbjct: 283 LDGGKIERELGYRPQVSFADGLARTVRWYRENRGWWEPL 321 >gi|227121340|gb|ACP19372.1| SaqH [Micromonospora sp. Tu 6368] Length = 326 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 155/339 (45%), Positives = 210/339 (61%), Gaps = 29/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTG AGFIGS R ++ +V V+DKLTYAGN ++L + F+ Sbjct: 1 MRILVTGAAGFIGSHYVRTMLAGGYPGYEDARVTVLDKLTYAGNRDNLP--ASHPRLEFV 58 Query: 56 QVDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + DICD L E P DA+V+ AAESHVDRSI A +FI TN+ GT +LE Sbjct: 59 EGDICDLPL----LCELLPGHDAVVHMAAESHVDRSIEAAADFIRTNVGGTQTVLE---- 110 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +CL + R + +STDEVYGS+ G ++E+ P P+SPY+A+KASSD + A+ Sbjct: 111 --ACL---RSGIDRIVHVSTDEVYGSIATGSWTEEWPLQPNSPYAASKASSDLVARAYTR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 T+G+ + ++ CSNNYGPY PEKLIPL +T ++EG V LYGDG NVR+WL+V+DH R + Sbjct: 166 THGLNLSITRCSNNYGPYQHPEKLIPLFVTNLLEGRPVPLYGDGSNVREWLHVDDHCRGI 225 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LVL +GR GE YNIGG NE N++I L+ + +IR + DR GHD R Sbjct: 226 QLVLAQGRAGEVYNIGGGNEYTNLEIT-------KLLLELCGADDSMIRPVADRKGHDLR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 Y+ID KI+ +G+ P+ + GL TV WY DN WW+ Sbjct: 279 YSIDEGKIRRALGYEPRIAFDRGLADTVAWYRDNPGWWK 317 >gi|242279117|ref|YP_002991246.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio salexigens DSM 2638] gi|242122011|gb|ACS79707.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio salexigens DSM 2638] Length = 340 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 212/336 (63%), Gaps = 23/336 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQ 56 MRL++TGG GFIG+ YL+ + ++ +DKLTYAGN +L E+ Q ++ ++F+ Sbjct: 1 MRLLITGGCGFIGTNFI-YLMKERHPDWKLFNLDKLTYAGNRKNLLELEQDENSGYTFIH 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD+E + S L +++ DA+VNFAAESHVDRSI F+TTN +G ++E R Sbjct: 60 GDICDKEFVTSVLHDYKIDAVVNFAAESHVDRSINDPAPFLTTNTLGAQNMMECAR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +F+ +STDEVYG+L + FSE+ P P+SPYSA+KA +D + A+ T Sbjct: 116 -----SAGIEKFVHVSTDEVYGTLGPNDPAFSEENPLEPNSPYSASKAGADLMARAYFET 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y PV ++ CSNNYGPY FPEKLIPL + G + +YGDG N+RDW+YV+DH + Sbjct: 171 YKFPVSITRCSNNYGPYQFPEKLIPLMFIKATTGESLPIYGDGSNIRDWIYVDDHCTGVE 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L L KG+ G+ YN GG E+ N+++V E L A++ K S LI +++DRPGHD RY Sbjct: 231 LTLLKGQPGKAYNFGGAAEKTNLELVKE----LLAILGKDES---LITYVKDRPGHDMRY 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+D S + E+G+ P + G+ KT+ WY N W Sbjct: 284 AMDYSLAEKELGFAPAVTFDEGIRKTIEWYQSNGQW 319 >gi|262200608|ref|YP_003271816.1| dTDP-glucose 4,6-dehydratase [Gordonia bronchialis DSM 43247] gi|262083955|gb|ACY19923.1| dTDP-glucose 4,6-dehydratase [Gordonia bronchialis DSM 43247] Length = 334 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 206/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ R L +++ V+DKLTYA N +++ ++ + ++ DI Sbjct: 1 MRVLVTGGAGFIGANFVLRTLATRPDVEIRVLDKLTYAANPATVRALA--DRVDLVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + D +V+FAAESH D S+ F+ TN++GT+ LLE R Sbjct: 59 ADVELTDRLIAD--TDLVVHFAAESHNDNSLADPSAFVHTNLVGTYALLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ ISTDEVYG L D F+E YNPSSPYS+TKA SD LV AW ++G Sbjct: 110 ---RHGVRYHHISTDEVYGDLNLDDPARFTEQTAYNPSSPYSSTKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++V+DH A++ + Sbjct: 167 IAATISNCSNNYGPYQHVEKFIPRQITNVLSGIRPKLYGDGRNVRDWIHVDDHNDAVWTI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G+IGE Y IG + E N +V + LL + F+ DRPGHDRRYAI Sbjct: 227 IDRGQIGETYLIGADGEVDNRTVVETVLELLG-------QPADAFDFVTDRPGHDRRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DS+++++E+GW PQ + SG+ T+ WY DN WW+P Sbjct: 280 DSTRLRTELGWRPQYVDFRSGVQATIDWYRDNTAWWQP 317 >gi|320101335|ref|YP_004176927.1| dTDP-glucose 4,6-dehydratase [Desulfurococcus mucosus DSM 2162] gi|319753687|gb|ADV65445.1| dTDP-glucose 4,6-dehydratase [Desulfurococcus mucosus DSM 2162] Length = 336 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 154/340 (45%), Positives = 200/340 (58%), Gaps = 22/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ V GGAGFIGS RYL + + ++V DKLTYAG ++ ++ + F++ DI Sbjct: 1 MRIAVLGGAGFIGSNFVRYLASHRSMDLMVYDKLTYAGRYENIADLVEKGRVLFVRGDIA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + AL EF+PD IVNFAAE+HVDRSI FI TN++G + +LE Sbjct: 61 NEELLSHALAEFKPDFIVNFAAETHVDRSINDPSPFIKTNVLGVYTVLEVL--------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK ++ ISTDEVYG L G SED P NPSSPYSA+KA+ D L+ ++G TYGI Sbjct: 112 -KKTDSIYIHISTDEVYGDLWGDGEASEDWPLNPSSPYSASKAAGDLLIKSYGRTYGIRY 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + NNYGPY PEKLIP I R++ G +YGDG VRDW++VED RA+ +V+++ Sbjct: 171 RILRPCNNYGPYQHPEKLIPRTIIRLLNGKPAVIYGDGSQVRDWIHVEDTCRAIEMVMQR 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL--IRFIEDRPGHDRRYAID 297 G E YNI N +IV +L+ L I + RPG DRRYA+ Sbjct: 231 GGDSEVYNICANQYASIREIV--------SLLVSHLGRDPLRDIVYGRPRPGEDRRYAMK 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 KIK +GW P + GL KT+ WYL N WWWRPL E Sbjct: 283 CDKIKG-LGWSPTIGIGEGLKKTIEWYLSNEWWWRPLVDE 321 >gi|312143002|ref|YP_003994448.1| dTDP-glucose 4,6-dehydratase [Halanaerobium sp. 'sapolanicus'] gi|311903653|gb|ADQ14094.1| dTDP-glucose 4,6-dehydratase [Halanaerobium sp. 'sapolanicus'] Length = 321 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 150/337 (44%), Positives = 215/337 (63%), Gaps = 21/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++ GGAGFIGS Y+ ++ + ++ +D LTYAGNLN+LK I FSF + +I Sbjct: 1 MRILIAGGAGFIGSNFIYYMNDNYPEYKLFCLDALTYAGNLNNLKHIIGKKNFSFYKGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR + +E + + ++NFAAESHVD+SI F+ +N+ GT +LL+ + Sbjct: 61 CDRNFVYRFFREMEFELVINFAAESHVDKSITEPVIFLESNVKGTQVLLDACK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K +F QISTDEVYGSL K L F+E NPSSPYSA+KA++D LV ++ TY Sbjct: 114 --KFGVKKFHQISTDEVYGSLPLEKKELKFTEQSVLNPSSPYSASKAAADLLVKSYYKTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + +S CSNNYGPY EKLIPL I + ++ + +YGDG+N+RDW++V+DH +A+ L Sbjct: 172 NLAITISRCSNNYGPYQLSEKLIPLMIIKALKNEKLPIYGDGKNIRDWIHVKDHCQAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ K + GE YNIGG E+ N+ +V I L + P S LI F++DR GHD RYA Sbjct: 232 IVHKSKPGEVYNIGGGYEKNNLQVVKTI--LKELKKPLS-----LISFVKDRKGHDLRYA 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +D K+ E W PQ + ++GL +T+ WYL+N WW Sbjct: 285 VDIRKMNYEFDWQPQIDFKNGLKQTIKWYLENQNWWE 321 >gi|78043771|ref|YP_359826.1| dTDP-glucose 4,6-dehydratase [Carboxydothermus hydrogenoformans Z-2901] gi|77995886|gb|ABB14785.1| dTDP-glucose 4,6-dehydratase [Carboxydothermus hydrogenoformans Z-2901] Length = 309 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 145/325 (44%), Positives = 210/325 (64%), Gaps = 21/325 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA R D +++++DKLTYAG+L ++E+ + F + D+ Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYDH--ELIIVDKLTYAGDLRRIEEVR--DRIKFYKADVA 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I + +P+A+V+FAAESHVDRSI FI TN+ GT ++L+ +R Sbjct: 57 DKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +F+ ISTDEVYG L K G F+E+ P P+SPYS +KA++D L A+ TYG+PV Sbjct: 109 -KYGIEKFVHISTDEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPV 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ NNYGP+ +PEKLIP+ I + + + +YG G NVR+WLYV+D + A+YL+L+K Sbjct: 168 IVARPCNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQK 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YNIG E+ NI++V EI +L P+S LI F+EDRPGHD RY+++S Sbjct: 228 GKPGEAYNIGSGEEKGNIEVVKEILRILGK--PES-----LITFVEDRPGHDFRYSLNSK 280 Query: 300 KIKSEIGWFPQENMESGLNKTVCWY 324 KIK W + N G+ + WY Sbjct: 281 KIKMNYAWKHKVNFNEGIRFVIDWY 305 >gi|269957347|ref|YP_003327136.1| dTDP-glucose 4,6-dehydratase [Xylanimonas cellulosilytica DSM 15894] gi|269306028|gb|ACZ31578.1| dTDP-glucose 4,6-dehydratase [Xylanimonas cellulosilytica DSM 15894] Length = 331 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 204/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ V + +QV V+D LTYAG+ SL ++ + + ++ I Sbjct: 1 MQVLVTGGAGFIGANFVHQTVRERPDVQVTVLDALTYAGDRASLAPVA--DKITLVEGSI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + D +V+FAAESH D S+ F+ TN++GTF LLE R Sbjct: 59 TDAALVDRLVAA--SDLVVHFAAESHNDNSLNDPSPFVQTNVVGTFTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF ISTDEVYG L D F+ + PYNPSSPYS+TKA SD LV AW ++G Sbjct: 110 ---KHGVRFHHISTDEVYGDLELDDPAKFTPETPYNPSSPYSSTKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP +T +I+G LYG GQNVRDW++VEDH A++ + Sbjct: 167 VQATISNCSNNYGPYQHIEKFIPRQVTNLIDGIRPRLYGAGQNVRDWIHVEDHNSAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G+IGE Y IG + E+ N+++V L+ + + DRPGHD RYAI Sbjct: 227 IDRGQIGETYLIGADGEKNNLEVV-------QTLLEIFGRPADDFDHVNDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D+S++++E+GW PQ + SGL TV WY N WWRP Sbjct: 280 DASRLRNELGWTPQYTDFRSGLQATVEWYQANESWWRP 317 >gi|188997300|ref|YP_001931551.1| dTDP-glucose 4,6-dehydratase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932367|gb|ACD66997.1| dTDP-glucose 4,6-dehydratase [Sulfurihydrogenibium sp. YO3AOP1] Length = 322 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 214/331 (64%), Gaps = 20/331 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS R V + V+V+DKLTYAG+L LKE+ + +F + DI Sbjct: 1 MKILITGGAGFIGSEFTRQAVKK-GLDVVVVDKLTYAGDLERLKEVEEK--ITFYKADIT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E I + +P+ +V++AAESHVDRSIL FI TN+ GT +LL+ TR Sbjct: 58 NKEFIEYIFNKEKPNIVVHWAAESHVDRSILDPTPFIDTNVKGTQVLLDVTR-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + F+ I+TDEVYG L ++G F E P P+SPYS +KAS+D L A+ TYG+P+ Sbjct: 110 DNNVKL-FINIATDEVYGELGEEGQFYETTPLVPNSPYSVSKASADMLGRAYFRTYGLPL 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYG + +PEKLIP+ I + + + +YG G N+R+WL+V D A++ +++K Sbjct: 169 ITVRPSNNYGWWQYPEKLIPVVILKALSNEPIPVYGQGLNIREWLFVSDCADAVFEIIEK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G++GE YN+G E++NID+V I +L+ +LI F++DRPGHD RY++++ Sbjct: 229 GKVGEIYNVGSGQEKRNIDVVKSILKILN-------KPEDLITFVKDRPGHDYRYSLNTD 281 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI EIGW + N E G+ KTV WYLDN W Sbjct: 282 KINKEIGWKAKVNFEEGIEKTVKWYLDNLDW 312 >gi|226303739|ref|YP_002763697.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis PR4] gi|226182854|dbj|BAH30958.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis PR4] Length = 335 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 155/338 (45%), Positives = 203/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ V + +V V+D LTYAGN +SL I+ + +F+ DI Sbjct: 1 MRVLVTGGAGFIGANFVHQTVAERPDAEVTVLDALTYAGNKSSLDSIA--DRITFVHGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + D +V+FAAESH D S+ F+ TNI+GTF LL+ R Sbjct: 59 TDAVLVDELVG--AADVVVHFAAESHNDNSLADPWPFVQTNIVGTFTLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ ISTDEVYG L+ G F+E YNPSSPYS+TKASSD LV AW ++G Sbjct: 110 ---KHDVRYHHISTDEVYGDLELGDPDRFTESTAYNPSSPYSSTKASSDMLVRAWTRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGPY EK IP IT ++ G LYGDG NVRDW++V+DH A++ + Sbjct: 167 VRATLSNCSNNYGPYQHVEKFIPRQITNVLAGLRPKLYGDGLNVRDWIHVDDHNSAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GRIG+ Y IG + E N ++ I +L + F+ DRPGHD RYAI Sbjct: 227 IDGGRIGQTYLIGADGEVNNRTVMESILQILG-------RGADEFDFVTDRPGHDVRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 DSS ++ E+GW P+ E+ SGL T+ WY DN WWRP Sbjct: 280 DSSLLRKELGWSPRYEDFRSGLEATIDWYRDNEQWWRP 317 >gi|257053213|ref|YP_003131046.1| dTDP-glucose 4,6-dehydratase [Halorhabdus utahensis DSM 12940] gi|256691976|gb|ACV12313.1| dTDP-glucose 4,6-dehydratase [Halorhabdus utahensis DSM 12940] Length = 308 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 152/326 (46%), Positives = 209/326 (64%), Gaps = 19/326 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS YL++ +++V+D LTYAG+ ++L S F++ DI Sbjct: 1 MRVLVTGGAGFIGSNFVHYLLDATDHEIVVLDALTYAGDKSNLDGALDSPRCEFVEGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + + + AIVNFAAESHVDRSI F++TN+ GT LL+ R Sbjct: 61 DQELVEERTADVE--AIVNFAAESHVDRSIHEDAPFVSTNVGGTQTLLDAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D RF+QISTDEVYG + +G FSED +P +PY+ATKA +D+L +++ TY +PVL Sbjct: 111 -THDIERFVQISTDEVYGQIAEGTFSEDDKLDPRNPYAATKAGADHLAMSYHVTYDVPVL 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNNYGP EKLIP +TR EG + LYGDG NVR+W YV D+ RA+ VL G Sbjct: 170 ITRSSNNYGPRQHREKLIPKFLTRAAEGESLPLYGDGTNVREWTYVRDNCRAIERVLADG 229 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE YN+G E N+++ I +DA P+S LI F+EDRPGHD+RYA+D++K Sbjct: 230 EPGEIYNVGSGEELPNVEVAERILEAVDA--PES-----LIEFVEDRPGHDQRYALDTAK 282 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD 326 I+ E+ W + + E GL +TV +YLD Sbjct: 283 IE-ELWWEAEWSFEEGLEETVRYYLD 307 >gi|156743370|ref|YP_001433499.1| dTDP-glucose 4,6-dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234698|gb|ABU59481.1| dTDP-glucose 4,6-dehydratase [Roseiflexus castenholzii DSM 13941] Length = 337 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 212/334 (63%), Gaps = 19/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS L+N +++V DKLTYAG L +L + F+F++ DICD Sbjct: 4 ILVTGGAGFIGSNFVELLLNTYPDYRIVVYDKLTYAGRLENLARFQDNPHFAFVRGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R ++ + D +VNFAAE+HVDRSI+ D FI T++ GT++LLE + Sbjct: 64 PVAVRETIRIYDIDTLVNFAAETHVDRSIMDPDAFIRTDVYGTYVLLEAVK--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R L +STDEVYG ++ G S ED P P SPY+A+KA ++LV A+ TYG+PVL Sbjct: 115 EMKLERALFVSTDEVYGHIEPGHSSSEDDPLKPRSPYAASKAGGEHLVYAYYITYGLPVL 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +NN GPY +PEK +PL IT I+ + LYGDG+ +RD+ YV DH + +VL +G Sbjct: 175 ITRGTNNIGPYQYPEKAVPLFITNAIDDIPLPLYGDGRQMRDYQYVMDHCEGIDVVLHRG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIG E +NI + I LD L+ K YS LI+ + DRPGHDRRY++ + K Sbjct: 235 AIGEAYNIGSGVETENIVMAKAI---LD-LLGKPYS---LIQPVADRPGHDRRYSVRTDK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 IK+ +GW + + KTV WY++N WWRP+ Sbjct: 288 IKA-LGWRSRHTFAHAIEKTVRWYVENQDWWRPI 320 >gi|326405774|gb|ADZ62845.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. lactis CV56] Length = 350 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 148/344 (43%), Positives = 206/344 (59%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN+N++ + S + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGNVNNINMLFDSRRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ DEFI TN IGT+ L++ R + Sbjct: 67 PEIVDQVAS--KADAIVHYAAESHNDNSLKSQDEFIQTNFIGTYTLIQAARKY------- 117 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L + F++ PYNPSSPYS+TKA+SD +V Sbjct: 118 ---DLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSSPYSSTKAASDLIVR 174 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGP+ EK IP IT ++ G LYGDG+NVRDW++ EDH Sbjct: 175 AWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTEDH 234 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGR+GE Y IG + E+ N ++ L D L + R + DR G Sbjct: 235 SSGVWTILTKGRMGETYLIGADGEKNNKEV------LEDILTRMGKDKDDYDR-VTDRAG 287 Query: 290 HDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 HD RYAID+SK+++E+GW P+ + ESGL T+ WY +N WW+ Sbjct: 288 HDLRYAIDNSKLRTELGWAPKHTDFESGLQSTIDWYRENENWWK 331 >gi|15672180|ref|NP_266354.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. lactis Il1403] gi|12723052|gb|AAK04296.1|AE006257_6 dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. lactis Il1403] Length = 349 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 146/344 (42%), Positives = 207/344 (60%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN+N++ + S + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGNVNNINMLFDSGRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ DEFI TN IGT+ L++ R Sbjct: 67 PEIVDQVAS--KADAIVHYAAESHNDNSLKSQDEFIQTNFIGTYTLIQAAR--------- 115 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L + F++ PYNPSSPYS+TKA+SD +V Sbjct: 116 -KYDLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSSPYSSTKAASDLIVR 174 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGP+ EK IP IT ++ G LYGDG+NVRDW++ EDH Sbjct: 175 AWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTEDH 234 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGR+GE Y IG + E+ N ++ L+ ++ + + + DR G Sbjct: 235 SSGVWTILTKGRMGETYLIGADGEKNNKEV-------LEDILTRMGKDKDDYDRVTDRAG 287 Query: 290 HDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 HD RYAID+SK+++E+GW P+ + ESGL T+ WY +N WW+ Sbjct: 288 HDLRYAIDNSKLRTELGWAPKHTDFESGLQATIDWYRENENWWK 331 >gi|313633865|gb|EFS00585.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri FSL N1-067] Length = 288 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 206/301 (68%), Gaps = 17/301 (5%) Query: 40 LNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 +++L++I + F++ +ICD + +++ + E + DAIVNFAAESHVDRSIL FI T Sbjct: 1 MSNLEDIKDNANHVFVEGNICDYDLVKNIVLEHKIDAIVNFAAESHVDRSILNPGIFIET 60 Query: 100 NIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYS 158 N+ GT LL + + + ++LQ+STDEVYGSL + G F+E+ P P+SPYS Sbjct: 61 NVQGTLNLLNVAK---------ELNVTKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYS 111 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQ 218 A+KAS+D LV ++ TYG+ V ++ CSNNYGP HFPEKLIPL IT ++G + +YGDG+ Sbjct: 112 ASKASADLLVRSYFETYGLNVNITRCSNNYGPNHFPEKLIPLMITNGLDGEQLPIYGDGK 171 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 N+RDWL+V DH A+ LV+ KG+ GE YN+GG+NER N +IV ++D L S Sbjct: 172 NIRDWLHVSDHCAAIDLVIHKGKSGEVYNVGGHNERTNNEIVH---IIVDDL---KLSED 225 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +++ ++EDR GHD RYAID KI++E+GW P+ ++G+ +T+ WY++N WWRPL Sbjct: 226 KIV-YVEDRLGHDLRYAIDPKKIETELGWKPKYTFDTGIKETIEWYVNNEAWWRPLKSRA 284 Query: 339 K 339 K Sbjct: 285 K 285 >gi|296118115|ref|ZP_06836697.1| dTDP-glucose 4,6-dehydratase [Corynebacterium ammoniagenes DSM 20306] gi|295969001|gb|EFG82244.1| dTDP-glucose 4,6-dehydratase [Corynebacterium ammoniagenes DSM 20306] Length = 327 Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 152/339 (44%), Positives = 206/339 (60%), Gaps = 36/339 (10%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ R + K QV VIDKLTYAGN ++L +F+ DI D Sbjct: 1 MLVTGGAGFIGANFVRLVEKQWPKCQVTVIDKLTYAGNRDNLA----GTQTAFVHGDITD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + S + Q D IV+FAAESH D S+ FITTNI+GT++LLE R Sbjct: 57 AALVDSLVA--QTDVIVHFAAESHNDNSLHDPSPFITTNIMGTYVLLEAAR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +STDEV+G L+ G F+E Y PSSPYSA+KASSD+LV AW ++G+ Sbjct: 106 -KHSVYLHHVSTDEVFGDLEIGAPTTFTETTAYAPSSPYSASKASSDHLVRAWARSFGLQ 164 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V +SNCSNNYGPY EK IP IT +++G LYG G+ VRDW++V+DH A+ +L Sbjct: 165 VTVSNCSNNYGPYQHIEKFIPRQITNILDGRTPKLYGTGEQVRDWIHVDDHNLAVLEILA 224 Query: 239 KGRIGERYNIGGN----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G GE YNIG + N R+ I+++ E+ IP Y H + DRPGHD+RY Sbjct: 225 HGEFGETYNIGADQQDINNREVIELICEL-----MGIPGQYEH------VADRPGHDQRY 273 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 A+D+SK++ ++GW PQ N+ GL +T+ WY ++ WW+ Sbjct: 274 AMDASKLREQLGWQPQYTNLRDGLKQTIAWYTEHTAWWK 312 >gi|281490687|ref|YP_003352667.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. lactis KF147] gi|281374456|gb|ADA63977.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. lactis KF147] Length = 350 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 206/344 (59%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN+N++ + S + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGNVNNINMLFDSGRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ DEFI TN IGT+ L++ R + Sbjct: 67 PEIVDQVAS--KADAIVHYAAESHNDNSLKSQDEFIQTNFIGTYTLIQAARKY------- 117 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L + F++ PYNPSSPYS+TKA+SD +V Sbjct: 118 ---DLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSSPYSSTKAASDLIVR 174 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGP+ EK IP IT ++ G LYGDG+NVRDW++ EDH Sbjct: 175 AWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTEDH 234 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGR+GE Y IG + E+ N ++ L D L + R + DR G Sbjct: 235 SSGVWTILTKGRMGETYLIGADGEKNNKEV------LEDILTRMGKDKDDYDR-VTDRAG 287 Query: 290 HDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 HD RYAID++K+++E+GW P+ + ESGL T+ WY +N WW+ Sbjct: 288 HDLRYAIDNTKLRTELGWAPKHTDFESGLQATIDWYRENENWWK 331 >gi|228912335|ref|ZP_04076030.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] gi|228847318|gb|EEM92277.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] Length = 299 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 199/307 (64%), Gaps = 17/307 (5%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 Q++ +D LTYAGNL++LKEIS + + F++ DI + I K+ + D ++NFAAESHV Sbjct: 9 QIVNVDLLTYAGNLSNLKEISLNQNYKFIKGDISNEIFIDKLFKKEKFDYVLNFAAESHV 68 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLF 145 DRSI F+ TNI+GT LL S K +F+QISTDEVYG+L + G F Sbjct: 69 DRSIKTPHIFVQTNILGTQALLH---------SAYKTKVKKFVQISTDEVYGTLSQTGAF 119 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 +E P+SPYSA+KAS+D +V A+ T+G+P ++ CSNNYGPY F EKLIPL IT Sbjct: 120 TEHTLIAPNSPYSASKASADLMVRAYHETFGLPTNITRCSNNYGPYQFTEKLIPLTITHA 179 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 + + LYGDG ++RDWL+VEDH A+ LVL G G YNIGG+NE N+DIV +I Sbjct: 180 LNNKDIPLYGDGLHIRDWLHVEDHCVAIDLVLHGGADGHIYNIGGDNEYTNLDIVQKILK 239 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 L+ K S I FI DR GHDRRYA+D++K+K E+GW P + GL +T+ WY+ Sbjct: 240 FLN----KDQSQ---ITFISDRLGHDRRYAMDATKLKVELGWTPHYLFDDGLTQTIKWYI 292 Query: 326 DNNWWWR 332 DN WW Sbjct: 293 DNRTWWE 299 >gi|116511028|ref|YP_808244.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. cremoris SK11] gi|116106682|gb|ABJ71822.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. cremoris SK11] Length = 350 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 206/344 (59%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN+N++ + S + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGNVNNINMLFDSGRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ DEFI TN IGT+ L++ R + Sbjct: 67 PEIVDQVAS--KADAIVHYAAESHNDNSLKSQDEFIQTNFIGTYTLIQAARKY------- 117 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L + F++ PYNPSSPYS+TKA+SD +V Sbjct: 118 ---DLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSSPYSSTKAASDLIVR 174 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGP+ EK IP IT ++ G LYGDG+NVRDW++ EDH Sbjct: 175 AWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTEDH 234 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGR+GE Y IG + E+ N ++ L D L + R + DR G Sbjct: 235 SSGVWAILTKGRMGETYLIGADGEKNNKEV------LEDILTRMGKDKDDYDR-VTDRAG 287 Query: 290 HDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 HD RYAID++K+++E+GW P+ + ESGL T+ WY +N WW+ Sbjct: 288 HDLRYAIDNTKLRTELGWTPKHTDFESGLQATIDWYRENENWWK 331 >gi|7688726|gb|AAF67513.1|AF170880_20 NovT [Streptomyces caeruleus] Length = 336 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 152/339 (44%), Positives = 217/339 (64%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRY-----LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L QV V+DKLTY+GN+ +L I+ + F+ Sbjct: 1 MRILVTGGAGFIGSEFVRATLRGTLPGSSGTQVTVLDKLTYSGNVLNLAPIADLRNYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD++ + + DAIV+FAAE+HVDRSI A F+ TN +GT +LLE Sbjct: 61 RGDICDQDLVDDVVAGH--DAIVHFAAETHVDRSIGSAASFVRTNAMGTQVLLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ ISTDEVYGS+ +G + E+ P P++PY+A KA+ D L LAW T+ Sbjct: 113 ---AASRHRLGRFVHISTDEVYGSIPEGAWDEESPVAPNAPYAAAKAAGDLLALAWHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ C+NNYGPY +PEKLIPL T +++G V +YG+G N R WL+V DH RA+ L Sbjct: 170 GLDVVVTRCTNNYGPYQYPEKLIPLFTTNVMDGQQVPVYGEGHNRRQWLHVSDHCRAIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N+++ +I + + +++R + DRPGHD RY+ Sbjct: 230 VLLGGRAGEVYHIGGGTELTNLELAEQI-------LKSCGAGWDMVRHVPDRPGHDFRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D++KI++E+G+ P+ GL +TV WY DN WW PL Sbjct: 283 LDTTKIRTELGFSPRVAFADGLVETVEWYRDNRAWWEPL 321 >gi|257067485|ref|YP_003153740.1| dTDP-glucose 4,6-dehydratase [Brachybacterium faecium DSM 4810] gi|256558303|gb|ACU84150.1| dTDP-glucose 4,6-dehydratase [Brachybacterium faecium DSM 4810] Length = 334 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 199/335 (59%), Gaps = 24/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+VTGGAGFIGSA +++ V V+DKLTYAG+ +SL+++ S + D+ D Sbjct: 6 LLVTGGAGFIGSAFVHHVIAHTDDTVTVLDKLTYAGHRSSLEDLP-SRRVRLVVGDVADA 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + DA+V+FAAESH D S+ F+ TN++GT+ LLE R Sbjct: 65 ATVEPLVA--AADAVVHFAAESHNDNSLSDPSPFLQTNLVGTYTLLEAVR---------- 112 Query: 123 KDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF ISTDEVYG L D F+E PYNPSSPYSATKA SD LV AW ++G+ Sbjct: 113 RHGARFHHISTDEVYGDLALDDPDRFTETTPYNPSSPYSATKAGSDLLVRAWVRSFGVQA 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 LSNCSNNYGP EK IP IT +I+G LYG G NVRDW++ EDH A+ +L+ Sbjct: 173 TLSNCSNNYGPRQHVEKFIPRQITNLIDGIRPRLYGAGANVRDWIHAEDHSSAVLRILEA 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G Y IG + E+ N ++V E+ L Y H + DRPGHD RYAID++ Sbjct: 233 GESGRTYLIGADGEKSNKEVV-ELILRLMGRPDDDYDH------VTDRPGHDLRYAIDAT 285 Query: 300 KIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 ++ E+GW P+ + E+GL T+ WY +N WWRP Sbjct: 286 ALREELGWAPRFRDFEAGLAATIDWYRENEGWWRP 320 >gi|167933028|ref|ZP_02520115.1| putative dTDP-glucose-4,6-dehydratase [candidate division TM7 single-cell isolate TM7b] Length = 337 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 154/340 (45%), Positives = 206/340 (60%), Gaps = 29/340 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS Y V + + + VIDKLTYAGN +L+ ++ +F++ DIC Sbjct: 3 KMLVTGGAGFIGSNFVHYTVKHKPEYDITVIDKLTYAGNRANLQPVADQ--INFVEGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E D IV+FAAESH D S+ F+ TN++GT+ +LE R Sbjct: 61 DAELMDKLVAE--NDIIVHFAAESHNDNSLRNPWPFVETNVVGTYTILEAIR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K R ISTDEV+G L D F+ED PYNPSSPYS+TKASSD LV AW ++GI Sbjct: 111 --KHGKRLHHISTDEVFGDLELDDPNRFTEDTPYNPSSPYSSTKASSDMLVRAWIRSFGI 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ LYG G+ VRDW++V DH A++L+L Sbjct: 169 KATISNCSNNYGPYQHIEKFIPRQITNILSNIKPKLYGTGEQVRDWIHVNDHNAAVHLIL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG +GE Y IG +N+ N +V E+ L Y H + DRPGHD RYA+D Sbjct: 229 EKGELGETYIIGADNDHVNNKMVIELICELMGKGKDWYEH------VNDRPGHDMRYAMD 282 Query: 298 SSKIKSEIGWFP-----QENMESGLNKTVCWYLDNNWWWR 332 SSK++ E+GW P Q M GL +T+ WY ++ WW+ Sbjct: 283 SSKLRRELGWQPEYTDNQTGMRDGLMQTIEWYREHEDWWK 322 >gi|167957267|ref|ZP_02544341.1| putative dTDP-glucose-4,6-dehydratase [candidate division TM7 single-cell isolate TM7c] Length = 337 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 205/340 (60%), Gaps = 29/340 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS Y V + + + VIDKLTYAGN +L+ ++ +F++ DIC Sbjct: 3 KMLVTGGAGFIGSNFVHYTVKHKPEYDITVIDKLTYAGNRANLEPVASQ--INFVEGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E D IV+FAAESH D S+ F+ TN+IGT+ LE R Sbjct: 61 DAELMNKLVAE--NDIIVHFAAESHNDNSLRNPWPFVETNVIGTYTTLEAVR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K R ISTDEV+G L D F+ED PYNPSSPYS+TKASSD LV AW ++GI Sbjct: 111 --KHDKRLHHISTDEVFGDLELDDPNRFTEDTPYNPSSPYSSTKASSDMLVRAWIRSFGI 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ LYG G+ VRDW++V+DH A++L+L Sbjct: 169 KATISNCSNNYGPYQHIEKFIPRQITNILSDIKPKLYGTGEQVRDWIHVDDHNSAVHLIL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG +GE Y IG +N+ N +V E+ L Y H + DRPGHD RYA+D Sbjct: 229 EKGELGETYIIGADNDHVNNKMVIELICELMGKGKDWYEH------VNDRPGHDMRYAMD 282 Query: 298 SSKIKSEIGWFP-----QENMESGLNKTVCWYLDNNWWWR 332 SSK++ E+GW P Q M GL +T+ WY + WW+ Sbjct: 283 SSKLRRELGWQPEYTDNQTGMRDGLLQTIEWYRKHEDWWK 322 >gi|170516927|gb|ACB15401.1| RmlB1 [Bifidobacterium longum] Length = 313 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 145/316 (45%), Positives = 197/316 (62%), Gaps = 24/316 (7%) Query: 22 NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFA 81 N + V V+D LTYAGNL +++ I + F+ +ICD E + + DAIV++A Sbjct: 4 NHPDVHVTVLDALTYAGNLENIRPI-LGDRVEFVHGNICDAELLDKIVPGH--DAIVHYA 60 Query: 82 AESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL- 140 AESH D SI + F+ TN+ GTF LLE R K R+ +STDEVYG L Sbjct: 61 AESHNDNSIANPEPFLKTNVEGTFRLLEAAR----------KYDVRYHHVSTDEVYGDLA 110 Query: 141 --DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLI 198 D F+E PY+PSSPYS+TKASSD LV AW T+GI +SNCSNNYGPY EK I Sbjct: 111 LDDPAKFTERTPYHPSSPYSSTKASSDLLVRAWHRTFGIRATISNCSNNYGPYQHVEKFI 170 Query: 199 PLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNID 258 P IT ++EG LYG+G+NVRDW++ +DH ++ +L KGR+GE Y IG N ER NI Sbjct: 171 PRQITNILEGLKPKLYGNGENVRDWIHTDDHSTGVWTILTKGRLGETYLIGANGERNNIT 230 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGL 317 ++ +I ++ ++ +++DRPGHDRRYAIDS+K+++E+GW P + + GL Sbjct: 231 VLRDILAVMG-------QDSDAFDWVKDRPGHDRRYAIDSTKLRTELGWKPTHTDFQKGL 283 Query: 318 NKTVCWYLDNNWWWRP 333 +T+ WY DN WW P Sbjct: 284 EQTIKWYTDNRAWWEP 299 >gi|239629916|ref|ZP_04672947.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527528|gb|EEQ66529.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 322 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 202/312 (64%), Gaps = 20/312 (6%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D LTYAGN N+L ++ F+Q +I +RE + ++++ DAIVNFAAESHVD Sbjct: 7 IVNLDLLTYAGNKNNLTDLKHDPSHIFVQGNINNRELVAYLIEQYHIDAIVNFAAESHVD 66 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFS 146 RSIL + F+ TN+ GT LL E + + LQISTDEVYGSL G F+ Sbjct: 67 RSILHPEIFVETNVKGTLALLHEAH----------RHDIKLLQISTDEVYGSLGSTGYFT 116 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E+ P P+SPY+A+KAS+D LV ++ TYG V ++ +NNYGPY FPEKLIPL I + Sbjct: 117 ENSPLQPNSPYAASKASADMLVRSYFETYGTHVNITRSTNNYGPYQFPEKLIPLMIINGL 176 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 + + +YGDG+N+RDWL+V D+ + + LVL+KG GE+YNIG NNE +N IV Sbjct: 177 KDKELPIYGDGKNIRDWLFVRDNCKGIDLVLRKGVAGEKYNIGANNEYENNTIVH----- 231 Query: 267 LDALIPKSYSHTEL-IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 LI + E I+ EDR GHD+RYAIDS+KIKSE+GW P+ + + + KT+ WY Sbjct: 232 ---LIVRELGLNEARIKHTEDRLGHDQRYAIDSTKIKSELGWQPECSFNAYIPKTISWYA 288 Query: 326 DNNWWWRPLYKE 337 ++ WW PL K+ Sbjct: 289 NHREWWEPLLKD 300 >gi|258540229|ref|YP_003174728.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus Lc 705] gi|56684476|gb|AAW22445.1| RmlB [Lactobacillus rhamnosus] gi|56684536|gb|AAW22499.1| RmlB [Lactobacillus rhamnosus] gi|257151905|emb|CAR90877.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus Lc 705] Length = 341 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 210/349 (60%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEQDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY D+ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTDHRSWWQ 326 >gi|56684516|gb|AAW22481.1| RmlB [Lactobacillus rhamnosus] Length = 341 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 210/349 (60%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEQDN-KTVLE---LILELMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY D+ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTDHRSWWQ 326 >gi|125623086|ref|YP_001031569.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. cremoris MG1363] gi|27462667|gb|AAO15544.1|AF458777_3 RfbB [Lactococcus lactis subsp. cremoris MG1363] gi|124491894|emb|CAL96815.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. cremoris MG1363] gi|300069834|gb|ADJ59234.1| dTDP-glucose 4,6-dehydratase [Lactococcus lactis subsp. cremoris NZ9000] Length = 350 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 206/344 (59%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN+N++ + S + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGNVNNINMLFDSGRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ DEFI TN IGT+ L++ R + Sbjct: 67 PEIVDQVAS--KADAIVHYAAESHNDNSLKSQDEFIQTNFIGTYTLIQAARKY------- 117 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L + F++ PYNPSSPYS+TKA+SD +V Sbjct: 118 ---DLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSSPYSSTKAASDLIVR 174 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGP+ EK IP IT ++ G LYGDG+NVRDW++ EDH Sbjct: 175 AWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTEDH 234 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KG++GE Y IG + E+ N ++ L D L + R + DR G Sbjct: 235 SSGVWTILTKGQMGETYLIGADGEKNNKEV------LEDILTRMGKDKDDYDR-VTDRAG 287 Query: 290 HDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 HD RYAID+SK+++E+GW P+ + ESGL T+ WY +N WW+ Sbjct: 288 HDLRYAIDNSKLRTELGWTPKHTDFESGLQATIDWYRENENWWK 331 >gi|319942629|ref|ZP_08016937.1| dTDP-glucose 4,6-dehydratase [Sutterella wadsworthensis 3_1_45B] gi|319803808|gb|EFW00740.1| dTDP-glucose 4,6-dehydratase [Sutterella wadsworthensis 3_1_45B] Length = 336 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 202/326 (61%), Gaps = 5/326 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIG+ Y L+ +D LTYA N + ++ + + D+CD Sbjct: 4 ILITGGAGFIGTNFVEYFAQKYPAYRLIDLDALTYAANKEAFPRQAKLSNVIPIHGDVCD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R ++E+ +++FAAESHVD SI F+ TNI GT ++L+ +W Sbjct: 64 ESAVRDLMEEYDVTGVIHFAAESHVDNSIADPMRFVFTNIHGTTVMLDAALRYWQ--RTG 121 Query: 122 KKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF +STDEV+G+L + G F E+ Y P+SPYSA+KA+SD + ++ TYG+ V Sbjct: 122 RLVSSRFHHVSTDEVFGTLGESGFFDENSAYAPNSPYSASKAASDLMARSYAKTYGMNVT 181 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 LSNCSNNYGP+ EKLIP I R + + V LYG+G NVRDWL+V DH RAL L+ + Sbjct: 182 LSNCSNNYGPWQHDEKLIPTIIRRCLAHTLVPLYGNGLNVRDWLWVNDHCRALDLIFHQA 241 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSS 299 G RYN+GG+ ER N+DI I LLD + P S + + ELI F++DRPGHD RYA+D+ Sbjct: 242 APGARYNVGGHCERSNLDIAEGICRLLDEMHPWSGHQYRELITFVDDRPGHDFRYAVDAQ 301 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 K++ ++GW P GL +TV WYL Sbjct: 302 KLERDLGWKPAMPFLVGLKQTVEWYL 327 >gi|258508992|ref|YP_003171743.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus GG] gi|257148919|emb|CAR87892.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus GG] gi|259650285|dbj|BAI42447.1| dTDP-glucose-4,6-dehydratase [Lactobacillus rhamnosus GG] Length = 341 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 210/349 (60%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKELVDKLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTINSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILNGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEQDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY D+ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTDHRSWWQ 326 >gi|7329195|gb|AAF59935.1| dTDP-D-glucose 4,6-dehydratase [Streptomyces antibioticus] Length = 335 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 211/342 (61%), Gaps = 27/342 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ------VLVIDKLTYAGNLNSLKEISQSNLFSF 54 M L+VTG AGFIGS +L+ + + V+DKLTYAG L + + +F Sbjct: 1 MNLLVTGAAGFIGSRYVHHLLEAARAGGEPAPVITVLDKLTYAGVLGN---VPDDPAVTF 57 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI D + S + E D +V+FAAESHVDRSI F+ TN++GT +LL+ Sbjct: 58 VRGDIADAPLVDSLMAEA--DQVVHFAAESHVDRSITSPGTFVRTNVLGTQMLLD----- 110 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +CL + F+ +STDEVYGS++ G + E P P+SPYSA+KASSD L L++ T Sbjct: 111 -ACL---RHGVGPFVHVSTDEVYGSIEHGSWPEHQPLCPNSPYSASKASSDLLALSYHRT 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V ++ CSNNYGP+ FPEKL+PL +T +++G V LYGDG NVR+WL+V+DH + Sbjct: 167 HGLDVRVTRCSNNYGPHQFPEKLVPLFVTNLLDGLRVPLYGDGLNVREWLHVDDHCLGVD 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LV +GR GE Y+IGG E N D+ G LLDA +++ + DR GHDRRY Sbjct: 227 LVRTQGRPGEVYHIGGGTELTNRDLT---GLLLDAF----GVGWDVVDPVADRKGHDRRY 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 A+D +K E+G+ P+ + G+ +T+ WY DN WW PL K Sbjct: 280 ALDCAKAADELGYRPRRDFAEGIARTIDWYRDNRAWWEPLKK 321 >gi|56684496|gb|AAW22463.1| RmlB [Lactobacillus rhamnosus] Length = 341 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/349 (44%), Positives = 210/349 (60%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K + + ++ Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEQDN-KTVLE---LILKLMGKPTGYYDQVK-- 278 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY D+ WW+ Sbjct: 279 -DRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTDHRSWWQ 326 >gi|308180143|ref|YP_003924271.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045634|gb|ADN98177.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 338 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 204/340 (60%), Gaps = 30/340 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L++TGGAGFIG+ RY+ + ++Q++V+DKLTYAGN +L +I + + DIC Sbjct: 3 HLLITGGAGFIGANFARYVYESHPEVQIVVLDKLTYAGNRANLTDI-LGDRVKLVVGDIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + DAIV+FAAESH D++++ FI TNI+GT+ L++ Sbjct: 62 DAPLVDRLVS--KADAIVHFAAESHNDKALVNPWPFIQTNIVGTYTLIQAA--------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K RF +STDEVYG L D+G F+ PY PSSPYSA+KASSD LV AW Sbjct: 111 -TKYHKRFHHVSTDEVYGDLPLSEHGSGDEGKFTPTSPYQPSSPYSASKASSDMLVRAWT 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++ DH A Sbjct: 170 RSFGLQATISNCSNNYGPYQHIEKFIPRQITNILSGRRPKLYGTGNNVRDWIHTNDHSAA 229 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ +L KGRIGE Y IG N E N V E+ L +Y + DRPGHD Sbjct: 230 IWDILTKGRIGEAYLIGANGEMSN-KAVLEMILQLMGQPQDAYD------VVRDRPGHDL 282 Query: 293 RYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 RYAID+SK+++E+GW PQ N E+GL T+ WY + WW Sbjct: 283 RYAIDASKLRTELGWRPQYTNFEAGLQDTIEWYTSHRSWW 322 >gi|40644835|emb|CAE17528.1| NDP-4,6-dehydratase [Streptomyces griseus subsp. griseus] Length = 326 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 149/344 (43%), Positives = 216/344 (62%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R L++ + V V+D+LTYAG+ +L + + Sbjct: 1 MRVLVTGGAGFIGSHYVRSLLSGAYAGYERAHVTVLDRLTYAGSTANLPMTHPR--LTLV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CDR + L E DA+V+FAAESHVDRSI A F TN++GT LL+ Sbjct: 59 RGDVCDRRPLLDLLPEH--DAVVHFAAESHVDRSIHDASLFARTNVVGTQNLLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C+ + + + +STDEVYGS+D+G ++ED P P+SPY+A+KA +D + A+G T+ Sbjct: 111 CCVRTGVR---KVVHVSTDEVYGSIDEGSWTEDHPLEPNSPYAASKAGADLMARAYGRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP+ PEKL+P ITR+++G V LYGDG++VR+W++V+DH RA+ L Sbjct: 168 GLDVSVTRCSNNYGPHQHPEKLLPHFITRLLDGLQVPLYGDGRHVREWIHVDDHCRAVQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL KG G YNI G R N D+ ++ L A + +R +EDR GHDRRYA Sbjct: 228 VLDKGAPGAAYNIAG-VARSNEDMTRDLLRLCGADWSR-------VRRVEDRKGHDRRYA 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +D S I+ +G+ P+ +E+GL V WY + WW+PL + + Sbjct: 280 VDDSLIRDTLGFTPRIPLEAGLAGLVDWYRAHRAWWQPLTRTAQ 323 >gi|300857651|ref|YP_003782634.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudotuberculosis FRC41] gi|300685105|gb|ADK28027.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudotuberculosis FRC41] gi|302329943|gb|ADL20137.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis 1002] Length = 334 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 156/353 (44%), Positives = 208/353 (58%), Gaps = 35/353 (9%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS R L +V V+DKLTYAGN +L ++ DICD Sbjct: 5 LLVTGGAGFIGSNFVRRTLETRSDYRVRVLDKLTYAGNSANLDGCDAE----LVEGDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L + D IV+FAAESH D S+ FI TN++GTF LLE R Sbjct: 61 AALVDKLLSD--ADVIVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + +STDEV+G L D F+E PYNPSSPYSA+KA SD+LV AW ++ + Sbjct: 110 -RHRVHLHHVSTDEVFGDLELEDPNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDVS 168 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 LS+CSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++ +L Sbjct: 169 ATLSHCSNNYGPYQHIEKFIPRQITNILSGIPPKLYGTGEQVRDWIHVDDHNDAIHAILD 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG +N+ N V E+ + + SY H + DRPGHD RYA+DS Sbjct: 229 RGRIGESYIIGADNDHVNNKQVIEL--ICHLMGADSYEH------VADRPGHDMRYAMDS 280 Query: 299 SKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 +K+++E+GW P+ M GL+ T+ WY DN WWRPL ++ N+Y+K Sbjct: 281 TKLRTELGWKPRFTDTATGMREGLSHTIQWYRDNEHWWRPLKDTVE--NNYAK 331 >gi|54022174|ref|YP_116416.1| putative dTDP-glucose-4,6-dehydratase [Nocardia farcinica IFM 10152] gi|54013682|dbj|BAD55052.1| putative dTDP-glucose-4,6-dehydratase [Nocardia farcinica IFM 10152] Length = 340 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 151/340 (44%), Positives = 207/340 (60%), Gaps = 29/340 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ + V + V V+D LTYAGN SL ++ + F+ DI Sbjct: 1 MRLLVTGGAGFIGANFVQQTVAERPDATVTVLDALTYAGNRASLAPVA--DRIDFVHGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + DA+V+FAAESH D S+ F+ TNI+GT+ LL+ R Sbjct: 59 ADLDLVDELVSGV--DAVVHFAAESHNDNSLAEPWPFVQTNIVGTYSLLQAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R+ +STDEVYG L ++ F+E YNPSSPYSATKASSD LV AW ++G+ Sbjct: 110 ---RHDVRYHHVSTDEVYGDLTAEQPPFTETTAYNPSSPYSATKASSDLLVRAWTRSFGV 166 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +I+G LYG G +RDW++V DH RA++ +L Sbjct: 167 RATISNCSNNYGPYQHVEKFIPRQITNLIDGVRPRLYGAGHQIRDWIHVHDHNRAVWDIL 226 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYA 295 ++GRIG+ Y IG N E N +V LL+A P + H + DRPGHD+RYA Sbjct: 227 ERGRIGQTYLIGANGELDNKSVVR---MLLEAFGRDPDDFDH------VTDRPGHDQRYA 277 Query: 296 IDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPL 334 ID++ +++E+GW P+ + +GL T+ WY N WWRP+ Sbjct: 278 IDATLLRTELGWTPRYADFRAGLAATIDWYRANESWWRPM 317 >gi|169836771|ref|ZP_02869959.1| dTDP-glucose 4,6-dehydratase [candidate division TM7 single-cell isolate TM7a] Length = 365 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 149/344 (43%), Positives = 202/344 (58%), Gaps = 47/344 (13%) Query: 34 LTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGA 93 LTYAGNL ++ + F +VDI D+ I E + D +VNFAAESHVDRSI Sbjct: 2 LTYAGNLGTIANEIKDERVKFEKVDIRDQREIARIFSENEVDFVVNFAAESHVDRSIENP 61 Query: 94 DEFITTNIIGTFILLEETRLWWSCLSQDK-----KDQFRFLQISTDEVYGSLDK------ 142 F+ TNI+GT LLE + W+ + KD ++LQ+STDEVYGSL K Sbjct: 62 QIFLETNILGTQNLLENAKKAWTIAKDENGYPVYKDGVKYLQVSTDEVYGSLSKDYDTAI 121 Query: 143 ------------------------GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 F+E +P SPYSA+KAS+D++V+A+G TY +P Sbjct: 122 DLVIDDEEVKKVVKNRTNLKTYGKNFFTEKTALDPRSPYSASKASADHIVIAYGETYKMP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + ++ CSNNYGPYHFPEKLIPL I ++EG + +YG G NVRDWLYVEDH + + LVL+ Sbjct: 182 INITRCSNNYGPYHFPEKLIPLMIKNVLEGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLR 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT------------ELIRFIED 286 I E YNIGG NE +NI+IV + +L I + + +LI +++D Sbjct: 242 NADIYEIYNIGGFNEEQNINIVKLVIDILREEIENNDEYKKVLKTDLQNINYDLITYVQD 301 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R GHD RYAID SKI ++GW+P+ + E+G+ KTV WYL++ W Sbjct: 302 RLGHDMRYAIDPSKIARDLGWYPETDFETGIRKTVKWYLEHQDW 345 >gi|257791791|ref|YP_003182397.1| dTDP-glucose 4,6-dehydratase [Eggerthella lenta DSM 2243] gi|257475688|gb|ACV56008.1| dTDP-glucose 4,6-dehydratase [Eggerthella lenta DSM 2243] Length = 333 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 208/334 (62%), Gaps = 25/334 (7%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS ++V N ++ V+V+DKLTYAGN +L I + +F+ DICD Sbjct: 5 LVTGGAGFIGSNFVHWVVDNQPEVHVVVLDKLTYAGNRENLAGIPDDRM-TFVHGDICDE 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + D IV+FAAESH D SI + F+ TN+ GTF LLE R Sbjct: 64 ELLEKIVPGI--DGIVHFAAESHNDNSIADPEPFVRTNVHGTFRLLEAAR---------- 111 Query: 123 KDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF ISTDEVYG L D F+E+ PY PSSPYS++KASSD LV AW TYG+ Sbjct: 112 KHDVRFHHISTDEVYGDLALDDPARFTEETPYCPSSPYSSSKASSDLLVRAWFRTYGVRA 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +SNCSNNYGP EK IP IT ++ G LYGDG NVRDW++ EDH A++ +L K Sbjct: 172 TISNCSNNYGPRQHIEKFIPRQITNVLTGIRPKLYGDGLNVRDWIHTEDHSSAVWAILTK 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR+GE Y IG + E+ NID+ L A++ + +++DRPGHDRRYAIDSS Sbjct: 232 GRLGETYLIGADGEKNNIDV-------LHAILENMGKDADDFDWVKDRPGHDRRYAIDSS 284 Query: 300 KIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWR 332 K++SE+GW P+ + GL T+ WY DN WW+ Sbjct: 285 KLRSELGWKPKHTDFAEGLKATIDWYRDNPQWWQ 318 >gi|294791315|ref|ZP_06756472.1| dTDP-glucose 4,6-dehydratase [Scardovia inopinata F0304] gi|294457786|gb|EFG26140.1| dTDP-glucose 4,6-dehydratase [Scardovia inopinata F0304] Length = 400 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 153/364 (42%), Positives = 210/364 (57%), Gaps = 53/364 (14%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSL------------KEISQ 48 R++VTGGAGFIGS RYLV N ++ V V+D LTYAGN+++L +E Q Sbjct: 33 RILVTGGAGFIGSNFVRYLVHNHPEVSVTVLDALTYAGNIHNLDGLIAQTTSGSEEESGQ 92 Query: 49 SNL-----------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSIL 91 + +F+ ICD + S + Q DAIV+FAAESH D +I Sbjct: 93 AQPRHVQGAGASAAARPSVPVTFMHGSICDDSLVDSVVS--QADAIVHFAAESHNDNAIY 150 Query: 92 GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSED 148 D + TNI+GTF +L+ R + RF +STDEV+G L + F+ED Sbjct: 151 DPDPVMKTNIMGTFTMLQAARRYG----------VRFHHVSTDEVFGDLPLDSQEEFTED 200 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 PY PSSPY+A+KA+SD+LV +W TYG+ +S CSNNYGPY EK IP IT +++G Sbjct: 201 SPYRPSSPYAASKAASDHLVRSWVRTYGLQATISTCSNNYGPYQHVEKFIPRQITNILQG 260 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 + +Y DG VRDW+ VED A++ +L+ G IGE Y I ER NI I +I L+ Sbjct: 261 KPIKIYSDGLAVRDWIAVEDQCSAVWKILEAGTIGETYVISSRGERSNIQIAHDIMSLMG 320 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 A + I F+ DRPG DRRYA+++SKI++E+GW P+ + GL +T+ WY D+ Sbjct: 321 AP-------ADSIEFVPDRPGADRRYALNASKIRAELGWEPEYTDFYQGLRRTIAWYRDH 373 Query: 328 NWWW 331 WW Sbjct: 374 CSWW 377 >gi|257867754|ref|ZP_05647407.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus EC30] gi|257874081|ref|ZP_05653734.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus EC10] gi|257801837|gb|EEV30740.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus EC30] gi|257808245|gb|EEV37067.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus EC10] Length = 345 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 155/346 (44%), Positives = 212/346 (61%), Gaps = 36/346 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y++N+ + V V+DKLTYAGN N+L + + + F + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVINNQPDVFVTVLDKLTYAGNKNNLNGLPK-DRFELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + +++ DA+V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 65 DQELVDRLVQD--TDAVVHYAAESHNDNSLKDPFPFVQTNIIGTYTLIEACR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSL---------DKGL---FSEDMPYNPSSPYSATKASSDYLV 168 K R+ +STDEVYG L +G F++ PYNPSSPYS+TKA SD LV Sbjct: 115 --KYNVRYHHVSTDEVYGDLPLREDLPGHGEGAGEKFTDKTPYNPSSPYSSTKAGSDLLV 172 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ D Sbjct: 173 KAWVRSFGLQATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTND 232 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDR 287 H A++ +L KG++GE Y IG + E N ++ I L+D PK +Y H + DR Sbjct: 233 HSSAVWTILTKGQMGETYLIGADGEEDNKAVIELILELMDQ--PKDAYEH------VNDR 284 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 PGHD RYAIDS+K+K E+GW P+ N GL T+ WY +N WW+ Sbjct: 285 PGHDLRYAIDSTKLKEELGWQPEFTNFRDGLADTIEWYRNNEEWWK 330 >gi|120402376|ref|YP_952205.1| dTDP-glucose 4,6-dehydratase [Mycobacterium vanbaalenii PYR-1] gi|119955194|gb|ABM12199.1| dTDP-glucose 4,6-dehydratase [Mycobacterium vanbaalenii PYR-1] Length = 335 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/339 (43%), Positives = 202/339 (59%), Gaps = 22/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ R V +QV V+D LTYAG+ SL+ + ++ DI Sbjct: 1 MRLLVTGGAGFIGANFVRTTVQQRPDVQVTVLDSLTYAGSRESLRGVDSQ--IRLVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + + DA+V+FAAE+HVD ++ + F+ +N++GTF +LE R Sbjct: 59 TDAELVGKLVAD--SDAVVHFAAETHVDNALADPEPFVHSNVLGTFTVLEAVR------H 110 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R ISTDEVYG L D F++ PYNPSSPYS+TKA++D LV AW +Y Sbjct: 111 ASVTKPVRLHHISTDEVYGDLELDDPARFTDATPYNPSSPYSSTKAAADMLVRAWVRSYR 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 171 VAATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPELYGTGANVRDWIHVDDHNSAVWRI 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G +G Y IG + ER N+ ++ I L+ P+ + H + DR GHD RYAI Sbjct: 231 LHDGTVGRTYLIGADGERDNLSVMRTILRLM-GRSPEDFDH------VTDRVGHDLRYAI 283 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D + ++ E+GW P+ + ESGL T+ WY DN WW PL Sbjct: 284 DPTPLRDELGWRPEHTDFESGLRDTIDWYRDNESWWGPL 322 >gi|240167775|ref|ZP_04746434.1| dTDP-glucose 4,6-dehydratase [Mycobacterium kansasii ATCC 12478] Length = 331 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 147/339 (43%), Positives = 204/339 (60%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + ++QV V+D TYAG +SL +++ + + ++ DI Sbjct: 1 MRLLVTGGAGFIGANFVHSTVRERHEVQVTVLDAFTYAGRRDSLADVADA--ITLVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + Q DA+V+FAAE+HVD ++ + F+ TN+IGT+ +LE R + Sbjct: 59 TDTGLVSRLVD--QSDAVVHFAAETHVDNALDDPEPFLHTNVIGTYTILEAVRRY----- 111 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R ISTDEVYG L D F+E PYNPSSPYSA+KA+ D LV AW +YG Sbjct: 112 -----GVRLHHISTDEVYGDLPLDDPQRFTESTPYNPSSPYSASKAAGDMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGSGANVRDWIHVDDHNSAVWRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG+IG Y I ER N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 227 LEKGQIGRTYLISAEGERDNLTVLRTLLRMM-GRDPDDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ ++E GL T+ WY DN WWRPL Sbjct: 280 DPSPLYDELAWAPKHTDLEEGLRATIDWYRDNEAWWRPL 318 >gi|302205389|gb|ADL09731.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis C231] gi|308275627|gb|ADO25526.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis I19] Length = 334 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 156/353 (44%), Positives = 208/353 (58%), Gaps = 35/353 (9%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS R L +V V+DKLTYAGN +L ++ DICD Sbjct: 5 LLVTGGAGFIGSNFVRRTLETRSDYRVRVLDKLTYAGNSANLDGCDAE----LVEGDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L + D IV+FAAESH D S+ FI TN++GTF LLE R Sbjct: 61 AALVDKLLSD--ADVIVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + +STDEV+G L D F+E PYNPSSPYSA+KA SD+LV AW ++ + Sbjct: 110 -RHRVHLHHVSTDEVFGDLELEDPNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDVS 168 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 LS+CSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++ +L Sbjct: 169 ATLSHCSNNYGPYQHIEKFIPRQITNILSGIPPKLYGTGEQVRDWIHVDDHNDAIHAILD 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG +N+ N V E+ + + SY H + DRPGHD RYA+DS Sbjct: 229 RGRIGESYIIGADNDHVNNKQVIEL--ICHLMGADSYEH------VADRPGHDMRYAMDS 280 Query: 299 SKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 +K+++E+GW P+ M GL+ T+ WY DN WWRPL + +N+Y+K Sbjct: 281 TKLRTELGWKPRFTDTATGMREGLSYTIQWYRDNEHWWRPLKDTV--ENNYAK 331 >gi|227832079|ref|YP_002833786.1| dTDP-glucose-4,6-dehydratase [Corynebacterium aurimucosum ATCC 700975] gi|262184066|ref|ZP_06043487.1| dTDP-glucose-4,6-dehydratase [Corynebacterium aurimucosum ATCC 700975] gi|227453095|gb|ACP31848.1| dTDP-glucose-4,6-dehydratase [Corynebacterium aurimucosum ATCC 700975] Length = 334 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 148/350 (42%), Positives = 212/350 (60%), Gaps = 26/350 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIG+ R + ++++ V+DKLTYAGN +L + + D+ Sbjct: 3 RLLVTGGAGFIGANFVRLVAQQRPEVEITVLDKLTYAGNRANLDGVDAELVVG----DVA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + Q D +V+FAAESH D S+ F+ TNI+GTF+LLE +C Sbjct: 59 DEGVVDKLVS--QADTVVHFAAESHNDNSLRDPSPFLHTNIMGTFVLLE------ACRRH 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D R +STDEV+G L+ G F+E+ PYNPSSPYSATKA SD+LV AW ++G+ Sbjct: 111 D----VRLHHVSTDEVFGDLEIGADTYFTEETPYNPSSPYSATKAGSDHLVRAWVRSFGL 166 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ +L Sbjct: 167 RATISNCSNNYGPYQHIEKFIPRQITNLLLGQPAKLYGTGEQVRDWIHVDDHNEAVLAIL 226 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GR+GE YNIG + E N V E ++ L+ + + + DRPGHD+RYA+D Sbjct: 227 DRGRLGETYNIGADQEDTNNRQVIE---MICELMGATDNGQARFEHVADRPGHDQRYAMD 283 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 +SK++ E+GW P+ ++ GL T+ WY + WWR +E++ +Y+K Sbjct: 284 ASKLRRELGWAPRYTDLREGLAATIEWYRAHEEWWRAGKEEVEA--NYAK 331 >gi|258509033|ref|YP_003171784.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus GG] gi|225590485|gb|ACN94859.1| RmlB [Lactobacillus rhamnosus GG] gi|257148960|emb|CAR87933.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus GG] gi|259650324|dbj|BAI42486.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus GG] Length = 341 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 154/349 (44%), Positives = 210/349 (60%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYQHHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTINSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEQDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY D+ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTDHRSWWQ 326 >gi|46190661|ref|ZP_00121204.2| COG1088: dTDP-D-glucose 4,6-dehydratase [Bifidobacterium longum DJO10A] Length = 313 Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 145/316 (45%), Positives = 198/316 (62%), Gaps = 24/316 (7%) Query: 22 NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFA 81 N + V V+D LTYAGNL +++ I + F+ +ICD E + + DAIV++A Sbjct: 4 NHPDVHVTVLDALTYAGNLENIRGI-LGDRVEFVHGNICDAELLDKIVPGH--DAIVHYA 60 Query: 82 AESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL- 140 AESH D SI + F+ TN+ GTF LLE R K R+ +STDEVYG L Sbjct: 61 AESHNDNSIANPEPFLKTNVEGTFRLLEAAR----------KYDVRYHHVSTDEVYGDLA 110 Query: 141 --DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLI 198 D F+E PY+PSSPYS+TKASSD LV AW T+GI +SNCSNNYGP+ EK I Sbjct: 111 LDDPAKFTERTPYHPSSPYSSTKASSDLLVRAWHRTFGIRATISNCSNNYGPFQHVEKFI 170 Query: 199 PLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNID 258 P IT ++EG LYG+G+NVRDW++ +DH ++ +L KGR+GE Y IG N ER NI Sbjct: 171 PRQITNVLEGLRPKLYGNGENVRDWIHTDDHSTGVWTILTKGRLGETYLIGANGERNNIT 230 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGL 317 ++ +I ++ P ++ +++DRPGHDRRYAIDS+K+++E+GW P + + GL Sbjct: 231 VLRDILAVM-GQDPDAFD------WVKDRPGHDRRYAIDSTKLRTELGWKPTHTDFQKGL 283 Query: 318 NKTVCWYLDNNWWWRP 333 +T+ WY DN WW P Sbjct: 284 EQTIKWYTDNRAWWEP 299 >gi|15610600|ref|NP_217981.1| dTDP-glucose 4,6-dehydratase RMLB [Mycobacterium tuberculosis H37Rv] gi|15843059|ref|NP_338096.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis CDC1551] gi|31794640|ref|NP_857133.1| dTDP-glucose 4,6-dehydratase RmlB1 [Mycobacterium bovis AF2122/97] gi|121639384|ref|YP_979608.1| putative dTDP-glucose 4,6-dehydratase rmlB1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663329|ref|YP_001284852.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148824674|ref|YP_001289428.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis F11] gi|167966769|ref|ZP_02549046.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis H37Ra] gi|215405503|ref|ZP_03417684.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis 02_1987] gi|215428971|ref|ZP_03426890.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|215432434|ref|ZP_03430353.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis EAS054] gi|215447803|ref|ZP_03434555.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T85] gi|218755243|ref|ZP_03534039.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|224991880|ref|YP_002646569.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800509|ref|YP_003033510.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 1435] gi|254234055|ref|ZP_04927380.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis C] gi|254366065|ref|ZP_04982110.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis str. Haarlem] gi|254552568|ref|ZP_05143015.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188519|ref|ZP_05765993.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|260202647|ref|ZP_05770138.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T46] gi|260206835|ref|ZP_05774326.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289445064|ref|ZP_06434808.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289449168|ref|ZP_06438912.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|289555734|ref|ZP_06444944.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 605] gi|289576200|ref|ZP_06456427.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289747297|ref|ZP_06506675.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 02_1987] gi|289752188|ref|ZP_06511566.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|289755597|ref|ZP_06514975.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289759627|ref|ZP_06519005.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis T85] gi|289763646|ref|ZP_06523024.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|294995762|ref|ZP_06801453.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis 210] gi|297636123|ref|ZP_06953903.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 4207] gi|297733123|ref|ZP_06962241.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN R506] gi|306777812|ref|ZP_07416149.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu001] gi|306782530|ref|ZP_07420867.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu002] gi|306786349|ref|ZP_07424671.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu003] gi|306790718|ref|ZP_07429040.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu004] gi|306795247|ref|ZP_07433549.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu005] gi|306799436|ref|ZP_07437738.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu006] gi|306805283|ref|ZP_07441951.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu008] gi|306809468|ref|ZP_07446136.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu007] gi|306969576|ref|ZP_07482237.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu009] gi|306973930|ref|ZP_07486591.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu010] gi|307081639|ref|ZP_07490809.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu011] gi|307086245|ref|ZP_07495358.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu012] gi|313660454|ref|ZP_07817334.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN V2475] gi|81668708|sp|O06329|RMLB_MYCTU RecName: Full=dTDP-glucose 4,6-dehydratase gi|2104387|emb|CAB08730.1| dTDP-GLUCOSE 4,6-DEHYDRATASE RMLB [Mycobacterium tuberculosis H37Rv] gi|13883403|gb|AAK47910.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis CDC1551] gi|31620237|emb|CAD95680.1| PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE RMLB1 [Mycobacterium bovis AF2122/97] gi|121495032|emb|CAL73518.1| Probable dTDP-glucose 4,6-dehydratase rmlB1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599584|gb|EAY58688.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis C] gi|134151578|gb|EBA43623.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis str. Haarlem] gi|148507481|gb|ABQ75290.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148723201|gb|ABR07826.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis F11] gi|224774995|dbj|BAH27801.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322012|gb|ACT26615.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 1435] gi|289417983|gb|EFD15223.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289422126|gb|EFD19327.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|289440366|gb|EFD22859.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 605] gi|289540631|gb|EFD45209.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289687825|gb|EFD55313.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 02_1987] gi|289692775|gb|EFD60204.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|289696184|gb|EFD63613.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289711152|gb|EFD75168.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|289715191|gb|EFD79203.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis T85] gi|308213896|gb|EFO73295.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu001] gi|308324847|gb|EFP13698.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu002] gi|308329101|gb|EFP17952.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu003] gi|308332909|gb|EFP21760.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu004] gi|308336569|gb|EFP25420.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu005] gi|308340444|gb|EFP29295.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu006] gi|308344308|gb|EFP33159.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu007] gi|308348199|gb|EFP37050.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu008] gi|308352923|gb|EFP41774.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu009] gi|308356766|gb|EFP45617.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu010] gi|308360711|gb|EFP49562.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu011] gi|308364326|gb|EFP53177.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu012] gi|323717948|gb|EGB27137.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CDC1551A] gi|326905310|gb|EGE52243.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis W-148] gi|328460240|gb|AEB05663.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 4207] Length = 331 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 199/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D LTYAG SL ++ + +Q DI Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDA--IRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ + F+ TN+IGTF +LE R Sbjct: 59 TDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D+ F+E PYNPSSPYSATKA +D LV AW +YG Sbjct: 110 ---RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIG Y I ER N+ ++ + L+D P + H + DR GHD RYAI Sbjct: 227 LDRGRIGRTYLISSEGERDNLTVLRTLLRLMDR-DPDDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ + E GL T+ WY DN WWRPL Sbjct: 280 DPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPL 318 >gi|260584908|ref|ZP_05852652.1| dTDP-glucose 4,6-dehydratase [Granulicatella elegans ATCC 700633] gi|260157338|gb|EEW92410.1| dTDP-glucose 4,6-dehydratase [Granulicatella elegans ATCC 700633] Length = 331 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 205/337 (60%), Gaps = 24/337 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ +++ ++DKLTYA + +++ ++ + F QVDI D Sbjct: 6 IIVTGGAGFIGSNFVLYIKRQYPNVKITILDKLTYASSFSTISDLLDDRV-RFYQVDIAD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + + + D IV+FAAES DRS+ F+ TN++GT LLE R Sbjct: 65 SEQLEKVITK-EHDLIVHFAAESFNDRSLTDTASFVQTNVLGTHHLLELAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K Q RF QISTDEVYG K F+E+ Y PSSPYSATKAS+D LV AW ++G+ Sbjct: 115 -KYQLRFHQISTDEVYGDFSIESKEKFTEETQYQPSSPYSATKASADLLVKAWVRSFGVQ 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY PEK IP I +++ LYG+G NVRDW++VEDH RA+ L++ Sbjct: 174 ATISNCSNNYGPYQNPEKFIPRQIINILKQEKPVLYGNGLNVRDWIHVEDHCRAIDLIID 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG+IGE Y +G +NER N++++ I LL T+ FIEDRPGHDRRY I++ Sbjct: 234 KGKIGETYLVGIDNERNNLEVLQMILVLLGK------EKTDF-EFIEDRPGHDRRYGINA 286 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 K+ E+G+ P E L + + WY N WW L Sbjct: 287 HKLYEELGYQPIHTYFEKELKQVIDWYQKNTAWWSEL 323 >gi|215413378|ref|ZP_03422062.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis 94_M4241A] gi|298526948|ref|ZP_07014357.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 94_M4241A] gi|298496742|gb|EFI32036.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 94_M4241A] Length = 331 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 199/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D LTYAG SL ++ + +Q DI Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDA--IRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ + F+ TN+IGTF +LE R Sbjct: 59 TDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D+ F+E PYNPSSPYSATKA +D LV AW +YG Sbjct: 110 ---RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VGATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIG Y I ER N+ ++ + L+D P + H + DR GHD RYAI Sbjct: 227 LDRGRIGRTYLISSEGERDNLTVLRTLLRLMDR-DPDDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ + E GL T+ WY DN WWRPL Sbjct: 280 DPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPL 318 >gi|68146481|emb|CAH10168.1| ChaS2 protein [Streptomyces chartreusis] Length = 332 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 208/335 (62%), Gaps = 26/335 (7%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFIG+ + L + ++ V+D LTYAGN ++LK ++ F++ DIC Sbjct: 3 RLLVTGGAGFIGANFVHHTLTTRPEFEICVLDALTYAGNRDNLKSVAGD--IRFVEGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + + D +V+ AAESHVD S+ + F+ +N++GT++LLE R + Sbjct: 61 DTELVDRLVAD--ADLVVHLAAESHVDNSLRDPEPFVRSNVMGTYVLLEAVRRY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF ISTDEV+G L + F+E PYNPSSPYSATKASSD LV AW ++G+ Sbjct: 113 ----DRRFHHISTDEVFGDLPLDSEEKFTEASPYNPSSPYSATKASSDMLVRAWVRSFGV 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 LSNC+NNYGPY EK IP +T ++ LYG G+NVR+W +VEDH A++L+L Sbjct: 169 AATLSNCANNYGPYQHAEKFIPRQVTNVLTDRLPKLYGSGRNVREWTHVEDHNEAVHLIL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG IGE Y IG E N IV LL+ + + E++ DRPGHD RYA D Sbjct: 229 EKGGIGETYLIGSGCEMSNKAIV---KILLELMGKPVDRYEEIL----DRPGHDLRYAND 281 Query: 298 SSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWW 331 SSK+++ +GW P+ ++ SGL T+ WY +N WWW Sbjct: 282 SSKLRTRLGWQPRHRSLRSGLAATIDWYRENPWWW 316 >gi|288905036|ref|YP_003430258.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus UCN34] gi|306831109|ref|ZP_07464270.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306833216|ref|ZP_07466345.1| dTDP-glucose 4,6-dehydratase [Streptococcus bovis ATCC 700338] gi|288731762|emb|CBI13323.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus UCN34] gi|304424583|gb|EFM27720.1| dTDP-glucose 4,6-dehydratase [Streptococcus bovis ATCC 700338] gi|304426675|gb|EFM29786.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 349 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/347 (44%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIQTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N E GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEATIKWYTDNQDWWK 330 >gi|296130221|ref|YP_003637471.1| dTDP-glucose 4,6-dehydratase [Cellulomonas flavigena DSM 20109] gi|296022036|gb|ADG75272.1| dTDP-glucose 4,6-dehydratase [Cellulomonas flavigena DSM 20109] Length = 331 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 204/338 (60%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS V + + V V+D LTYAG+ SL + + + + D+ Sbjct: 1 MRMLVTGGAGFIGSNFVHQTVRERPDVHVTVLDALTYAGDERSLDPVDGRVVLA--KGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +K+ D +V+FAAESH D S+ F+ TN+IGT+ LLE R + Sbjct: 59 ADPDIVDRLVKD--ADLVVHFAAESHNDNSLHDPWPFVRTNVIGTYQLLEAVRRY----- 111 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ +STDEVYG L D F+ + PYNPSSPYS+TKASSD LV AW ++G Sbjct: 112 -----DVRYHHVSTDEVYGDLELDDPAKFTPETPYNPSSPYSSTKASSDLLVRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +++G LYG G+NVRDW++VEDH A++ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVVDGVRPKLYGTGENVRDWIHVEDHNSAVWRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ GR+GE Y IG + E+ N V E+ L +Y H + DRPGHD RYAI Sbjct: 227 IEDGRLGETYLIGADGEKDN-RTVIELILELMGQPSDAYDH------VNDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++K+++E+GW P+ GL T+ WY N WWRP Sbjct: 280 DATKLRTELGWEPRYTTFADGLAATIEWYRANEAWWRP 317 >gi|255324211|ref|ZP_05365333.1| dTDP-glucose 4,6-dehydratase [Corynebacterium tuberculostearicum SK141] gi|255298727|gb|EET78022.1| dTDP-glucose 4,6-dehydratase [Corynebacterium tuberculostearicum SK141] Length = 334 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 203/336 (60%), Gaps = 24/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ R + +V V+DK+TYAGN +L + ++ DI D Sbjct: 4 MLVTGGAGFIGANFVRLICQARPDTRVTVLDKITYAGNRANLAGLD----IDLVEGDIAD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DA+V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 60 PATVEPLVA--AADAVVHFAAESHNDNSLRDPSPFIHTNLVGTFTLLEACR--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R +STDEV+G L+ G F+ED Y PSSPYSATKA SD+LV AW ++G+ Sbjct: 109 -KHDTRLHHVSTDEVFGDLEIGAGTNFTEDTAYAPSSPYSATKAGSDHLVRAWVRSFGLR 167 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ +L+ Sbjct: 168 ATISNCSNNYGPYQHIEKFIPRQITNILSGHTPKLYGTGEQVRDWIHVDDHNEAVLAILE 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE YNIG + E N V E L+ ++ + + L + DRPGHD+RYA+D+ Sbjct: 228 RGRIGETYNIGADQEDINNKQVIE---LICEIMGHTRNGRALYEHVADRPGHDQRYAMDA 284 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +K++ E+GW P+ ++ +GL T+ WY +N WW+P Sbjct: 285 AKLRRELGWTPRFTDIRAGLEDTIAWYRENEGWWKP 320 >gi|301067028|ref|YP_003789051.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus casei str. Zhang] gi|300439435|gb|ADK19201.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus casei str. Zhang] Length = 341 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 209/349 (59%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + ++Q++V+DKLTYAGN ++ ++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYRHHPEVQMIVLDKLTYAGNKANIADL-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + + D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKEVVDKWMAKV--DTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N ++ I L+D T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEKDNKTVLELILKLMDKP-------TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY ++ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLANTIKWYTEHRDWWQ 326 >gi|307133571|dbj|BAJ19061.1| putative NDP-glucose 4,6-dehydratase [Streptomyces sp. SANK 62799] Length = 321 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 144/337 (42%), Positives = 209/337 (62%), Gaps = 26/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSA R L++ QV V+D LTYAGNL +L + F+F+ Sbjct: 1 MRVLVTGGAGFIGSAYVRELLSGAYPAWQAAQVTVLDLLTYAGNLANLAPVD--GRFTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI DR + + DA+V+FAAESHVDRSI GA +F+ TN++G RL+ Sbjct: 59 HGDIGDRALLEKVVPGH--DAVVSFAAESHVDRSIAGAADFLRTNVLGV------QRLFD 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL + R + +STDEVYGS+ G + E P P+SPY+A+KASSD L ++ T+ Sbjct: 111 ACL---EAGVGRVVHVSTDEVYGSIGSGSWDETAPLAPNSPYAASKASSDLLARSYHVTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+++ C NNYGPY PEK +P +TR++ G V LYGDG NVRDW++V DH + + + Sbjct: 168 GLPVVITRCGNNYGPYQHPEKAVPRFVTRLLTGGTVPLYGDGTNVRDWVHVTDHCQGIQV 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G GE Y++ G E NI+ L D ++ + + + + DRPGHDRRY+ Sbjct: 228 AAEHGAAGEVYHVAGTRELTNIE-------LTDRILAACGAGWDRVEKVPDRPGHDRRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +K+++ +G+ P+ + E GL +TV WY N WW+ Sbjct: 281 LADAKLRT-LGYAPRISFEKGLAETVRWYAKNIAWWQ 316 >gi|227534052|ref|ZP_03964101.1| dTDP-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188324|gb|EEI68391.1| dTDP-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 341 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 151/356 (42%), Positives = 211/356 (59%), Gaps = 40/356 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS Y+ N+ +Q++V+DKLTYAGN +L+ I + + DI Sbjct: 1 MKIMVTGGAGFIGSNFVHYVYNNHPDVQIVVLDKLTYAGNRANLESI-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + Q DA V++AAESH D +++ F+ +N+IGT+ LLE R Sbjct: 60 CDAPLVDKLMS--QVDACVHYAAESHNDNALIDPSPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF +STDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHVSTDEVYGDLP---LREDLPGHGEGVGEKFTTESRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV W ++G+ +SNCSNNYGPY + EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHGWTRSFGVRATISNCSNNYGPYQYIEKFIPRQITNILAGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + EDH A++ +L KG+IGE Y IG + E+ N V E+ P Y + Sbjct: 225 HTEDHSSAVWTILTKGKIGETYLIGADGEQDN-KTVLEMILKDMGKDPSDYEQ------V 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +DRPGHD RYAIDS+K+++E+GW P+ + +SGL T+ WY +N WW+ E++ Sbjct: 278 KDRPGHDLRYAIDSTKLRTELGWAPKYTDFDSGLKHTIQWYTENQDWWQAEKAEVE 333 >gi|159897768|ref|YP_001544015.1| dTDP-glucose 4,6-dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159890807|gb|ABX03887.1| dTDP-glucose 4,6-dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 364 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 150/337 (44%), Positives = 208/337 (61%), Gaps = 25/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+ VTGGAGFIGS RY + + +V+VID LTYAG+L++L + F+Q DI Sbjct: 1 MRIAVTGGAGFIGSNFVRYWMDTNPADEVVVIDALTYAGHLSNLAGYHERANCQFVQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE----FITTNIIGTFILLEETRLWW 115 CD + L + +V+FAAE+HVDRS LG E F +NI GT LL +R Sbjct: 61 CDYPTMLKVLAGV--NLVVHFAAETHVDRS-LGEFEMERQFYRSNIEGTASLLRASR--- 114 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + F +STDEV+G LD F E PYNPSSPY+ +KA+SD++V A+ Sbjct: 115 ------EAGVGHFHHVSTDEVFGDLDFDDPQKFHETYPYNPSSPYAVSKAASDHVVRAFA 168 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD-----GQNVRDWLYVE 227 HT+ P+ ++NC+NNYGP+ PEKLIP +I ++ G V LY D G+N+RDWL+V+ Sbjct: 169 HTHKYPITITNCTNNYGPFQTPEKLIPRSIALLLAGQKVKLYTDAEGIPGRNIRDWLHVQ 228 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 DH A+ LV++KGRIGE Y IGG E N +V + ++ + ++ + + F+ DR Sbjct: 229 DHCEAIALVIQKGRIGETYGIGGEAELSNYHLVETMLDIMSEYLDRTLTIENSVEFVADR 288 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PGHDRRYA+D SKIK E+GW P+ + + G +TV WY Sbjct: 289 PGHDRRYAMDLSKIKRELGWQPRYSFQQGFLETVQWY 325 >gi|307710514|ref|ZP_07646951.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis SK564] gi|307618777|gb|EFN97916.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis SK564] Length = 349 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYKNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + Q DAIV++AAESH D S+ FI TN IGT+ LLE TR Sbjct: 65 DAELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEATR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWRPEFTNFEAGLKETIKWYADNQEWWK 330 >gi|297567132|ref|YP_003686104.1| dTDP-glucose 4,6-dehydratase [Meiothermus silvanus DSM 9946] gi|296851581|gb|ADH64596.1| dTDP-glucose 4,6-dehydratase [Meiothermus silvanus DSM 9946] Length = 331 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 151/348 (43%), Positives = 209/348 (60%), Gaps = 24/348 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y L + +++V DKLTYAGNL +L+ + F+Q DI D Sbjct: 1 MMVTGGAGFIGSNYVYYALEAHPEWEMVVFDKLTYAGNLENLQPVRSR--IEFVQGDIAD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R AL DA+VNFAAESHVDRS+L F+ TN+ GT +LLEE R Sbjct: 59 PEAVRKALAGV--DAVVNFAAESHVDRSLLDPRPFVKTNVEGTLVLLEEAR--------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RFL +STDEVYG L L E P P SPY+A+KA++++LV ++G +YG+ V Sbjct: 108 RAGVRRFLHVSTDEVYGDLAGTLHHSLEADPMRPRSPYAASKAAAEHLVYSYGISYGLDV 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGPY +PEK+IPL IT +E + LYGDG +RD+++ DH + LVL + Sbjct: 168 VVTRGSNTYGPYQYPEKIIPLFITNALEDKPLPLYGDGSALRDYMHAYDHASGIDLVLHR 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YN+G + + + LL P + LI+F+EDRPGHD RY++D S Sbjct: 228 GSAGEAYNLGAREQVPGTQVAERVLELLGK--PPT-----LIKFVEDRPGHDYRYSVDPS 280 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 K ++ +GW + E GL KTV WY+DN WW L ++ +W Sbjct: 281 KAEA-LGWVRRYTFEEGLAKTVQWYVDNRGWWMRLRQKRDHQELMQRW 327 >gi|311741016|ref|ZP_07714841.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303818|gb|EFQ79896.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudogenitalium ATCC 33035] Length = 334 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 202/336 (60%), Gaps = 24/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ R + +V V+DK+TYAGN +L + ++ DI D Sbjct: 4 MLVTGGAGFIGANFVRLICQARPDTRVTVLDKITYAGNRANLAGLD----IDLVEGDIAD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 60 PATVEPLVA--AADVVVHFAAESHNDNSLRDPSPFIHTNLVGTFTLLEACR--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF +STDEV+G L+ G F+E Y PSSPYSATKA SD+LV AW ++G+ Sbjct: 109 -KHDTRFHHVSTDEVFGDLEIGAATKFTEHTAYAPSSPYSATKAGSDHLVRAWVRSFGLR 167 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ +L+ Sbjct: 168 ATISNCSNNYGPYQHIEKFIPRQITNILSGHSPKLYGTGEQVRDWIHVDDHNEAVLAILE 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE YNIG + E N V E L+ ++ + + L + DRPGHD+RYA+D+ Sbjct: 228 RGRIGETYNIGADQEDINNKQVIE---LICEIMGHTRNGRALYEHVADRPGHDQRYAMDA 284 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +K++ E+GW P+ ++ +GL T+ WY DN WW+P Sbjct: 285 AKLRRELGWTPRFTDIRAGLEDTIAWYRDNEGWWKP 320 >gi|68644531|emb|CAI34598.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 205/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLVA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G +DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAVDA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|325978005|ref|YP_004287721.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177933|emb|CBZ47977.1| dTDP-glucose 4,6-dehydratase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 349 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 205/349 (58%), Gaps = 44/349 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIQTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPK-SYSHTELIRFI 284 DH ++ +L KGRIGE Y IG + E+ N ++ + +L+ + PK +Y H + Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV---LELILEKMGQPKGAYDH------V 281 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAIDS+K++ E+GW PQ N E GL T+ WY DN WW+ Sbjct: 282 TDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEATIKWYTDNQDWWK 330 >gi|320546509|ref|ZP_08040824.1| dTDP-glucose 4,6-dehydratase [Streptococcus equinus ATCC 9812] gi|320448894|gb|EFW89622.1| dTDP-glucose 4,6-dehydratase [Streptococcus equinus ATCC 9812] Length = 348 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 153/347 (44%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIQTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW P+ N E GL TV WY DN WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPKYTNFEEGLEATVKWYTDNQDWWK 330 >gi|5902170|gb|AAD55454.1| dehydratase [Streptomyces antibioticus] Length = 335 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 146/343 (42%), Positives = 208/343 (60%), Gaps = 27/343 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK------IQVLVIDKLTYAGNLNSLKEISQSNLFSF 54 M L+VTG AGFIGS +L+ + + V+DKLTYAG L + + +F Sbjct: 1 MNLLVTGAAGFIGSRYVHHLLEATRRGREPAPVITVLDKLTYAGVLGN---VPDDPAVTF 57 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI D + S + E D +V+FAAE+HVDRSI F+ TN++GT +LL+ Sbjct: 58 VRGDIADAPLVDSLMAEA--DQVVHFAAETHVDRSITSPGTFVRTNVLGTQVLLDAAL-- 113 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + F+ +STDEVYGS++ G + E P P+SPYSA+KASSD L L++ T Sbjct: 114 -------RHGVGPFVHVSTDEVYGSIEHGSWPEHQPLCPNSPYSASKASSDLLALSYHRT 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ V ++ CSNNYGP+ FPEK++PL +T +++G V LYGDG NVR+WL+V+DH + Sbjct: 167 HGLDVRVTRCSNNYGPHQFPEKIVPLFVTNLLDGLRVPLYGDGLNVREWLHVDDHCLGVD 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LV +GR GE Y+IGG E N D+ G LLDA +++ + DR GHDRRY Sbjct: 227 LVRTQGRPGEVYHIGGGTELTNRDLT---GLLLDAF----GVGWDVVDPVADRKGHDRRY 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 A+D +K E+G+ P+ + G+ +T+ WY DN WW PL K Sbjct: 280 ALDCAKAADELGYRPRRDFAEGIARTIDWYRDNRAWWEPLKKR 322 >gi|148988117|ref|ZP_01819580.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP6-BS73] gi|68642409|emb|CAI32827.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643717|emb|CAI33924.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|147926581|gb|EDK77654.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP6-BS73] Length = 349 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G +DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAVDA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLREELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|118616617|ref|YP_904949.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium ulcerans Agy99] gi|183981102|ref|YP_001849393.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium marinum M] gi|118568727|gb|ABL03478.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium ulcerans Agy99] gi|183174428|gb|ACC39538.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium marinum M] Length = 331 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 150/339 (44%), Positives = 200/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D LTYAG SL ++ + ++ DI Sbjct: 1 MRLLVTGGAGFIGANFVHSSVREYPDDAVTVLDALTYAGRRESLADLEDA--IRLVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ + F+ TN++GTF +LE R Sbjct: 59 TDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFVHTNVLGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+E PYNPSSPYSATKA +D LV AW +YG Sbjct: 110 ---RHGVRLHHISTDEVYGDLELHDPARFTEATPYNPSSPYSATKAGADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VAATISNCSNNYGPYQHIEKFIPRQITNVLTGRRPKLYGTGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG+IG+ Y I ER N+ ++ + ++D P + H + DR GHD RYAI Sbjct: 227 LEKGQIGKTYLISSEGERDNLSVLRTLLRMMDR-DPDDFDH------VVDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + +E+ W P+ + E GL T+ WY N WWRPL Sbjct: 280 DPSLLYNELAWAPKHTDFEEGLRTTIDWYRANESWWRPL 318 >gi|228996410|ref|ZP_04156052.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides Rock3-17] gi|228763373|gb|EEM12278.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides Rock3-17] Length = 254 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 138/267 (51%), Positives = 185/267 (69%), Gaps = 17/267 (6%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 +++++ D+IV+FAAESHVDRSI G +F TTNI+GT +LLE + + RF Sbjct: 1 MQDYKIDSIVHFAAESHVDRSIQGPMQFYTTNIVGTALLLEAAKAFGIQ---------RF 51 Query: 129 LQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNN 187 L ISTDEVYGSL + G F+E+ P +P+SPYSA+KASSD + L++ TY +PV+++ CSNN Sbjct: 52 LHISTDEVYGSLGEIGYFTEETPVSPNSPYSASKASSDLIALSYFETYKLPVIVTRCSNN 111 Query: 188 YGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYN 247 YGPY +PEKLIPL IT +E + +YG GQNVRDWL+V DH A+ LVL GR GE YN Sbjct: 112 YGPYQYPEKLIPLMITNAMEDKELPVYGTGQNVRDWLHVFDHCTAIDLVLHNGRDGEIYN 171 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 +GGNNE++NI+IV + ++ K +I F+ DR GHD RYAIDSSK++ E+GW Sbjct: 172 VGGNNEKRNIEIV-------ETILEKLGKSKNMISFVPDRLGHDWRYAIDSSKLQRELGW 224 Query: 308 FPQENMESGLNKTVCWYLDNNWWWRPL 334 P + GL T+ WY +N WW+PL Sbjct: 225 KPIYSFTKGLEDTMEWYRNNEQWWKPL 251 >gi|148655748|ref|YP_001275953.1| dTDP-glucose 4,6-dehydratase [Roseiflexus sp. RS-1] gi|148567858|gb|ABQ90003.1| dTDP-glucose 4,6-dehydratase [Roseiflexus sp. RS-1] Length = 350 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 147/334 (44%), Positives = 208/334 (62%), Gaps = 19/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS ++ +++V DKLTYAG L +L F+F++ DICD Sbjct: 4 ILVTGGAGFIGSNFVELMLTKYPDYRIVVYDKLTYAGRLENLARFHGDPRFTFVRGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R ++ D +VNFAAE+HVDRSI+ D FI T++ GT++LLE + Sbjct: 64 PAGVREVIRAHGVDTLVNFAAETHVDRSIMDPDAFIRTDVYGTYVLLEAVK--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R L +STDEVYG ++ G S ED P P SPY+A+KA ++L A+ TYG+PVL Sbjct: 115 EMKLERALFVSTDEVYGHIEPGHSSSEDDPLKPRSPYAASKAGGEHLAYAYYITYGLPVL 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +NN GPY +PEK +PL IT I+ + LYGDG+ +RD+ YV DH + +VL +G Sbjct: 175 ITRGTNNIGPYQYPEKAVPLFITNAIDDIPLPLYGDGRQMRDYQYVMDHCEGIDVVLHRG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIG E +NI + I LD L+ K YS LI+ + DRPGHDRRY++ + K Sbjct: 235 VIGEAYNIGSGVETENIVMAKAI---LD-LLGKPYS---LIQPVADRPGHDRRYSVRTDK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 IK+ +GW + + KTV WY+++ WWRP+ Sbjct: 288 IKA-LGWQSRHTFAQAIEKTVRWYVEHQDWWRPI 320 >gi|1881546|gb|AAC44971.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] Length = 349 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++++L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWIILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|307708207|ref|ZP_07644674.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis NCTC 12261] gi|307615653|gb|EFN94859.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis NCTC 12261] Length = 349 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 204/349 (58%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYKNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLV 168 K RF +STDEVYG L F+ D YNPSSPYS+TKA+SD +V Sbjct: 115 --KYDIRFHHVSTDEVYGDLPLREDLPGNGEGPGEKFTADTKYNPSSPYSSTKAASDLIV 172 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ D Sbjct: 173 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTND 232 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIRFI 284 H ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H + Sbjct: 233 HSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQDADA-----YDH------V 281 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAID+SK++ E+GW P+ N ESGL +T+ WY DN WW+ Sbjct: 282 TDRAGHDLRYAIDASKLRDELGWKPEFTNFESGLKETIKWYTDNQEWWK 330 >gi|171779672|ref|ZP_02920628.1| hypothetical protein STRINF_01509 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281774|gb|EDT47208.1| hypothetical protein STRINF_01509 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 349 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIQTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW P+ N E GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPKYTNFEEGLEATIKWYTDNQDWWK 330 >gi|108798039|ref|YP_638236.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. MCS] gi|119867134|ref|YP_937086.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. KMS] gi|108768458|gb|ABG07180.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. MCS] gi|119693223|gb|ABL90296.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. KMS] Length = 335 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 145/341 (42%), Positives = 199/341 (58%), Gaps = 26/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D TYAG+ SL ++ + ++ D+ Sbjct: 1 MRLLVTGGAGFIGANFVHATVREHPDYAVTVLDAFTYAGSRESLAPVA--DRIRLVEGDV 58 Query: 60 CDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D + + + P DA+V+FAAE+HVD ++ F+ TN++GT+ +LE R Sbjct: 59 ADAALVGGLVDDLDPATDAVVHFAAETHVDNALADPGPFVQTNVVGTYTVLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + R +STDEVYG L D F+E PYNPSSPYS+TKA++D LV AW + Sbjct: 114 -----RAGVRLHHVSTDEVYGDLALDDPQRFTESTPYNPSSPYSSTKAAADLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+ +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ Sbjct: 169 YGVRATISNCSNNYGPYQHVEKFIPRQITNILTGRRPKLYGTGANVRDWIHVDDHNSAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L+ G +G Y IG ER N+ ++ + ++D P + H + DR GHD RY Sbjct: 229 RILRDGVVGRTYLIGAEGERDNLSVLRTLLRIMD-RDPDDFDH------VTDRAGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 AID S + E+GW P + E GL TV WY DN WWRPL Sbjct: 282 AIDPSVLYDELGWKPAHLDFEEGLRATVQWYRDNEAWWRPL 322 >gi|13377432|gb|AAK20693.1|AF316640_13 RmlB [Streptococcus pneumoniae] gi|68643604|emb|CAI33827.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643660|emb|CAI33872.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|332077648|gb|EGI88109.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae GA41301] Length = 349 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G +DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAVDA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|25026900|ref|NP_736954.1| putative dTDP-glucose-4,6-dehydratase [Corynebacterium efficiens YS-314] gi|23492180|dbj|BAC17154.1| putative dTDP-glucose-4,6-dehydratase [Corynebacterium efficiens YS-314] Length = 391 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 146/347 (42%), Positives = 208/347 (59%), Gaps = 29/347 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTGGAGFIG+ R V ++ V+DKLTYAGN ++L + + + + + DIC Sbjct: 56 LLVTGGAGFIGANFVRQTVEQHPEYDKITVLDKLTYAGNADNLAGLPEDRV-TLVVGDIC 114 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + + + D V+FAAESH D S+ F+ TN++GTF +LE R Sbjct: 115 EGELVDKLVADH--DITVHFAAESHNDNSLNDPSPFVQTNVVGTFTILEAIR-------- 164 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R +STDEV+G L D F+E Y PSSPYSATKA SD+LV AW ++GI Sbjct: 165 --RHGKRLHHVSTDEVFGDLALDDPNRFTETTAYKPSSPYSATKAGSDHLVHAWIRSFGI 222 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++L+L Sbjct: 223 EATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHNDAVHLIL 282 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+G +G+ Y IG +N+ N V + L L P +Y H + DRPGHD RYA+D Sbjct: 283 KEGTLGDTYIIGADNDHVNNKQVISMICELMGLGPDAYEH------VADRPGHDLRYAMD 336 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 S+K+++E+GW P+ M +GL +T+ WY +N WW+P +++ Sbjct: 337 STKLRTELGWAPKYTDTDTGMRAGLEQTIKWYTENQDWWKPAKDQVE 383 >gi|116495476|ref|YP_807210.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] gi|116105626|gb|ABJ70768.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] Length = 341 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 209/349 (59%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN ++ ++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQMIVLDKLTYAGNKANIADL-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + + D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKEVVDKWMAKV--DTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEKDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY ++ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTEHRDWWQ 326 >gi|3907612|gb|AAC78676.1| dTDP-glucose-4,6-dehydratase Cps19aN [Streptococcus pneumoniae] gi|68643374|emb|CAI33636.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 202/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + D Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLREELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|289549231|ref|YP_003474219.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484] gi|289182848|gb|ADC90092.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484] Length = 318 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 209/331 (63%), Gaps = 20/331 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGFIGS R V + Q +V+DKLTYAG++ L+E+ + +F + DI Sbjct: 1 MKLLITGGAGFIGSEFTRQAVKE-GYQCVVVDKLTYAGDIRRLEEVLEK--ITFYRCDIN 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + + +PD +V++AAESHVDRSI F TTN++GT LL+ + Sbjct: 58 NREFLEYIFSKEKPDVVVHWAAESHVDRSISDPSPFFTTNVLGTLNLLDTAK-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F+ ISTDEVYG L D+G F ED P+SPYS +KAS+D L A+ TYG+PV Sbjct: 110 -KYGVKSFINISTDEVYGELGDEGSFKEDSCLKPNSPYSVSKASADMLGRAYFRTYGLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYGP+ +PEKLIP+ I + I+ + +YG G NVR+WLYV D A+ ++KK Sbjct: 169 ITVRPSNNYGPWQYPEKLIPVVIVKAIKNEPIPIYGRGLNVREWLYVSDCAEAVLEIIKK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YN+G ER+NI E+ L+ +++ K +LI F++DRPGHD RY++D S Sbjct: 229 GEPGEIYNVGSGEERRNI----EVAKLILSILGKP---EDLISFVQDRPGHDYRYSLDVS 281 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++GW + +E G+ +TV WYLD+ W Sbjct: 282 GTWEKLGWKAKTKLEEGIRRTVEWYLDHIDW 312 >gi|259506037|ref|ZP_05748939.1| dTDP-glucose 4,6-dehydratase [Corynebacterium efficiens YS-314] gi|259166373|gb|EEW50927.1| dTDP-glucose 4,6-dehydratase [Corynebacterium efficiens YS-314] Length = 339 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 146/347 (42%), Positives = 208/347 (59%), Gaps = 29/347 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L+VTGGAGFIG+ R V ++ V+DKLTYAGN ++L + + + + + DIC Sbjct: 4 LLVTGGAGFIGANFVRQTVEQHPEYDKITVLDKLTYAGNADNLAGLPEDRV-TLVVGDIC 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + + + D V+FAAESH D S+ F+ TN++GTF +LE R Sbjct: 63 EGELVDKLVADH--DITVHFAAESHNDNSLNDPSPFVQTNVVGTFTILEAIR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R +STDEV+G L D F+E Y PSSPYSATKA SD+LV AW ++GI Sbjct: 113 --RHGKRLHHVSTDEVFGDLALDDPNRFTETTAYKPSSPYSATKAGSDHLVHAWIRSFGI 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A++L+L Sbjct: 171 EATISNCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHNDAVHLIL 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+G +G+ Y IG +N+ N V + L L P +Y H + DRPGHD RYA+D Sbjct: 231 KEGTLGDTYIIGADNDHVNNKQVISMICELMGLGPDAYEH------VADRPGHDLRYAMD 284 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 S+K+++E+GW P+ M +GL +T+ WY +N WW+P +++ Sbjct: 285 STKLRTELGWAPKYTDTDTGMRAGLEQTIKWYTENQDWWKPAKDQVE 331 >gi|241889294|ref|ZP_04776597.1| dTDP-glucose 4,6-dehydratase [Gemella haemolysans ATCC 10379] gi|241864131|gb|EER68510.1| dTDP-glucose 4,6-dehydratase [Gemella haemolysans ATCC 10379] Length = 342 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 155/344 (45%), Positives = 204/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y++N+ I V V+DKLTYAGN +L + + + F + DI D Sbjct: 4 IIVTGGAGFIGSNFVHYIINNHPDIHVTVLDKLTYAGNRENLAGLPE-DRFELVVGDIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + + DA+V++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 63 AELVDKLVS--KTDAVVHYAAESHNDNSLKDPYPFLHTNIIGTYALIEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL-------DKG-----LFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L KG F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 -KYDVRYHHVSTDEVYGDLPLREDLPGKGEGVGEKFTAETPYNPSSPYSSTKAGSDLLVK 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ EDH Sbjct: 171 AWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGITPKLYGEGKNVRDWIHTEDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++ +L KGRIGE Y IG + E N V E+ L +Y H + DR G Sbjct: 231 SSAVWTILTKGRIGETYLIGADGEEDN-KTVIELILELMGKDKNAYEH------VNDRAG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAID+SK++ E+GW PQ N GL T+ WY +N WW+ Sbjct: 284 HDLRYAIDASKLREELGWKPQFTNFRQGLADTIRWYEENESWWK 327 >gi|257868930|ref|ZP_05648583.1| dTDP-glucose 4,6-dehydratase [Enterococcus gallinarum EG2] gi|257803094|gb|EEV31916.1| dTDP-glucose 4,6-dehydratase [Enterococcus gallinarum EG2] Length = 313 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 149/326 (45%), Positives = 208/326 (63%), Gaps = 21/326 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGGAGFIGS R+++ D +L +D LTYA ++ L EIS + + F++ +I Sbjct: 1 MNLLITGGAGFIGSNFIRHMLKEDDHCFILNVDILTYASSILYLSEISPDHRYRFVRGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ IR LK+++ D ++NFAAESHVD SI A+ F+ TN++GT LL+ C Sbjct: 61 LDKQLIRRLLKDYKIDCLINFAAESHVDNSIKDANLFVQTNVLGTTCLLD-------CA- 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ RF+QISTDEVYGSL +G E+ P NPSSPYSA+KAS+D V A+ TYG+P Sbjct: 113 --KEANIRFIQISTDEVYGSLSEGYADENCPLNPSSPYSASKASADQFVCAYHKTYGLPF 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +NNYGP EK+IP + RM + +YGDG N+RDWLYVED RA++L+L+K Sbjct: 171 NIVRAANNYGPNQHYEKMIPQMLMRMQNNEALPVYGDGTNIRDWLYVEDFCRAIHLILRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDS 298 G GE YNI + E N+ +V ++ L+ H E I F+ DRPGHD RY +D+ Sbjct: 231 GVNGEIYNISSHQEIDNLSLVKKLCDLM--------QHDEKRITFVNDRPGHDFRYGVDT 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 KI+ ++GW ++ GL KTV WY Sbjct: 283 RKIE-KLGWQGNIFLDEGLAKTVSWY 307 >gi|84498710|ref|ZP_00997451.1| putative dTDP-D-glucose 4,6-dehydratase [Janibacter sp. HTCC2649] gi|84498715|ref|ZP_00997456.1| putative dTDP-D-glucose 4,6-dehydratase [Janibacter sp. HTCC2649] gi|84381010|gb|EAP96898.1| putative dTDP-D-glucose 4,6-dehydratase [Janibacter sp. HTCC2649] gi|84381015|gb|EAP96903.1| putative dTDP-D-glucose 4,6-dehydratase [Janibacter sp. HTCC2649] Length = 335 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 206/341 (60%), Gaps = 30/341 (8%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS L +V V+D LTYAG+ SL + + ++ DI Sbjct: 1 MRILVTGGAGFIGSNFVHLTLATRPGCEVTVLDALTYAGHRASLDGLG--DRVRLVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E D +V+FAAESH D S+ F+ TN+IGTF L+E R Sbjct: 59 TDLTLVDRLVSEH--DLVVHFAAESHNDNSLADPWPFVHTNVIGTFTLVEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + +STDEVYG L D G F+E YNPSSPYSATK +SD LV AW ++G Sbjct: 110 ---RHAVHYHHVSTDEVYGDLELDDPGRFTEATAYNPSSPYSATKGASDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGP EK IP IT +++G LYGDG NVRDW++V+DH RA++ + Sbjct: 167 LQATISNCSNNYGPRQHVEKFIPRQITNILDGVRPKLYGDGLNVRDWIHVDDHNRAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIEDRPGHDRRY 294 + +G+IGE Y IG + E N +V +I L+ DA ++ H + DRPGHDRRY Sbjct: 227 IDRGQIGETYLIGADGEVDNGTVVRDILGLMGEDA---DAFDH------VTDRPGHDRRY 277 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPL 334 AIDSS++++E+GW P+ + GL T+ WY DN WWRP+ Sbjct: 278 AIDSSRLRTELGWTPEYPSFREGLAATIDWYRDNEEWWRPM 318 >gi|68643149|emb|CAI33449.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643350|emb|CAI33617.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643546|emb|CAI33780.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643576|emb|CAI33804.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643632|emb|CAI33850.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643936|emb|CAI34107.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 202/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + D Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|225860394|ref|YP_002741903.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae Taiwan19F-14] gi|298229717|ref|ZP_06963398.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae str. Canada MDR_19F] gi|225726542|gb|ACO22393.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae Taiwan19F-14] gi|327390776|gb|EGE89116.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae GA04375] Length = 349 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|68644388|emb|CAI34483.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|89994597|emb|CAI34066.2| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGERPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLREELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|312176763|gb|ADQ39190.1| RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNHVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|15902366|ref|NP_357916.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae R6] gi|116516812|ref|YP_815845.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae D39] gi|149006112|ref|ZP_01829841.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP18-BS74] gi|149012103|ref|ZP_01833212.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP19-BS75] gi|149018054|ref|ZP_01834513.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP23-BS72] gi|168482596|ref|ZP_02707548.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1873-00] gi|194397909|ref|YP_002037042.1| dTDP-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae G54] gi|221231238|ref|YP_002510390.1| dTDP-glucose-4,6-dehydratase RmlB [Streptococcus pneumoniae ATCC 700669] gi|307126574|ref|YP_003878605.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae 670-6B] gi|18376693|gb|AAL68417.1|AF246897_14 dTDP-glucose 6-dehydratase [Streptococcus pneumoniae] gi|2804685|gb|AAC38674.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804710|gb|AAC38695.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804723|gb|AAC38706.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804729|gb|AAC38711.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|3320401|gb|AAC38759.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|3818498|gb|AAC69540.1| Cps23fQ [Streptococcus pneumoniae] gi|4200435|gb|AAD10183.1| Cps2N [Streptococcus pneumoniae D39] gi|15457877|gb|AAK99126.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae R6] gi|18376705|gb|AAL68428.1| dTDP-glucose 6-dehydratase [Streptococcus pneumoniae] gi|68642309|emb|CAI32734.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68642432|emb|CAI32847.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68642515|emb|CAI32915.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643209|emb|CAI33497.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643403|emb|CAI33659.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643460|emb|CAI33705.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643688|emb|CAI33897.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643748|emb|CAI33950.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643966|emb|CAI34133.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643996|emb|CAI34159.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68644361|emb|CAI34459.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|116077388|gb|ABJ55108.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae D39] gi|147762468|gb|EDK69429.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP18-BS74] gi|147763705|gb|EDK70639.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP19-BS75] gi|147931618|gb|EDK82596.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae SP23-BS72] gi|149929319|gb|ABR37233.1| RmlB [Streptococcus pneumoniae] gi|172043740|gb|EDT51786.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1873-00] gi|194357576|gb|ACF56024.1| dTDP-glucose 4,6-dehydratase rmlB [Streptococcus pneumoniae G54] gi|220673698|emb|CAR68191.1| dTDP-glucose-4,6-dehydratase RmlB [Streptococcus pneumoniae ATCC 700669] gi|306483636|gb|ADM90505.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae 670-6B] gi|309952141|gb|ADO95350.1| RmlB [Streptococcus pneumoniae] gi|332076801|gb|EGI87263.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae GA17545] Length = 349 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|68643825|emb|CAI34016.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGERPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|4406251|gb|AAD19915.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] Length = 348 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 207/349 (59%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSL---------DKGL---FSEDMPYNPSSPYSATKASSDYLV 168 K RF +STDEVYG L +GL F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 --KYDIRFHHVSTDEVYGDLPLREDLPGHGEGLGEKFTAETKYNPSSPYSSTKAASDLIV 172 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ D Sbjct: 173 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTND 232 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIRFI 284 H ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H + Sbjct: 233 HSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH------V 281 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 282 TDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|68642488|emb|CAI32894.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI S + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEILGSRV-ELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|83272141|gb|ABC00738.1| CosH [Streptomyces olindensis] Length = 327 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 214/336 (63%), Gaps = 25/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M ++VTG AGFIGS R L++ +V V+DKLTYAG LN+L + +F+ Sbjct: 1 MNILVTGAAGFIGSHFVRTLLSGGYPGHEDDRVTVLDKLTYAGTLNNLP--AHHPRLTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICD + + A+V+FAAESHVDRS+ GA+ F+ TN++GT LLE Sbjct: 59 HGDICDTTLLDKVFPGHE--AVVHFAAESHVDRSVAGAEAFVRTNVLGTQALLE------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F+Q+STDE YGS+ +G ++ED P P+SPY+A+KAS+D + ++ T+ Sbjct: 111 ---AALRHGIGVFVQVSTDETYGSIAEGRWTEDEPLLPNSPYAASKASADLIARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C+NNYGP PEKL+PL +TR+++G V LYGDG N+R+WL+V+DH A+ L Sbjct: 168 GLDVRITRCANNYGPGQHPEKLVPLFVTRLLDGQPVPLYGDGSNLREWLHVDDHCHAVRL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YN+GG N ++ G LL AL + + +L+R + DR GHD RYA Sbjct: 228 VLDRGRPGEVYNVGGGTHLTNKEMT---GRLL-ALCGRDW---DLVRRVADRKGHDFRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D SKI+ E+G+ P+ ++E GL +TV WY + W Sbjct: 281 VDDSKIRRELGYAPRWSLEDGLRETVEWYAAHRDHW 316 >gi|68643433|emb|CAI33684.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAT--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|126433700|ref|YP_001069391.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. JLS] gi|126233500|gb|ABN96900.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. JLS] Length = 335 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 145/341 (42%), Positives = 199/341 (58%), Gaps = 26/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D TYAG+ SL ++ + ++ D+ Sbjct: 1 MRLLVTGGAGFIGANFVHATVREHPDYAVTVLDAFTYAGSRESLAPVA--DRIRLVEGDV 58 Query: 60 CDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D + + + P DA+V+FAAE+HVD ++ F+ TN++GT+ +LE R Sbjct: 59 ADAGLVGGLVDDLDPATDAVVHFAAETHVDNALADPGPFVQTNVVGTYTVLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + R +STDEVYG L D F+E PYNPSSPYS+TKA++D LV AW + Sbjct: 114 -----RAGVRLHHVSTDEVYGDLALDDPRRFTESTPYNPSSPYSSTKAAADLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+ +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ Sbjct: 169 YGVRATISNCSNNYGPYQHVEKFIPRQITNILTGRRPKLYGTGANVRDWIHVDDHNSAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L+ G +G Y IG ER N+ ++ + ++D P + H + DR GHD RY Sbjct: 229 RILRDGVVGRTYLIGAEGERDNLSVLRTLLRIMD-RDPDDFDH------VTDRAGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 AID S + E+GW P + E GL TV WY DN WWRPL Sbjct: 282 AIDPSVLYDELGWKPAHLDFEEGLRATVQWYRDNEAWWRPL 322 >gi|168485502|ref|ZP_02710010.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] gi|168486648|ref|ZP_02711156.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] gi|168487600|ref|ZP_02712108.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] gi|68642461|emb|CAI32871.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68642543|emb|CAI32939.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643179|emb|CAI33473.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643238|emb|CAI33520.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643266|emb|CAI33544.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643856|emb|CAI34041.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|183569601|gb|EDT90129.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] gi|183570361|gb|EDT90889.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] gi|183571257|gb|EDT91785.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC1087-00] Length = 349 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|13377464|gb|AAK20723.1|AF316642_17 RmlB [Streptococcus pneumoniae] gi|68643292|emb|CAI33568.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|68643321|emb|CAI33592.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 202/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++E+ N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEV-LGNRVELVIGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + D Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|315654776|ref|ZP_07907681.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii ATCC 51333] gi|315490737|gb|EFU80357.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii ATCC 51333] Length = 330 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 205/338 (60%), Gaps = 27/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V D V V+DKL YAGN S++ + + NL + D+ Sbjct: 1 MHVLVTGGAGFIGANFVHTTVEDYPNATVTVLDKLGYAGNPASIEGLDRVNL---VVGDL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + S +K+ D +V+FAAESH D S++ FI +N++GTF +LE R Sbjct: 58 ADRDLVDSLVKD--ADLVVHFAAESHNDNSLVDPSPFIYSNLVGTFHILEACR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+ + PY PSSPYSA+KA SD LV AW ++G Sbjct: 109 ---RHHVRLHHISTDEVYGDLALDDPHKFTPETPYLPSSPYSASKAGSDMLVRAWVRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT I+G LYGDG NVRDW++V DH A++ + Sbjct: 166 VEATISNCSNNYGPYQHVEKFIPRMITNRIDGVRPRLYGDGLNVRDWIHVLDHNTAVWAI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +GR+GE Y IG + E+ N+++V + ++ + H ++DRPGHDRRYAI Sbjct: 226 INQGRLGETYLIGADGEKNNLEVVQALNRMM-GFPEDDFDH------VKDRPGHDRRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++K+ E GW P+ + E GL T+ WY + WWRP Sbjct: 279 DNTKLCEETGWTPRFTSFEEGLRDTIEWYTTHEDWWRP 316 >gi|225013157|ref|ZP_03703567.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-2A] gi|225002726|gb|EEG40712.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-2A] Length = 273 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/276 (49%), Positives = 186/276 (67%), Gaps = 6/276 (2%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 ++F+Q DI D +++ + Q D +V+ AAESHVD SI F TN++GT LLE Sbjct: 2 YTFVQGDIIDPSIVKALFDQHQFDGVVHLAAESHVDNSIKNPLGFAQTNVMGTLNLLEAA 61 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLA 170 R W +D RF ISTDEV+GSL K G F+E+ Y+P SPYSA+KA+SD+ V A Sbjct: 62 RNQW----KDDLVNKRFYHISTDEVFGSLGKEGAFTEETAYDPRSPYSASKAASDHFVRA 117 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + HTY +PV+LSNCSNNYGP +PEKLIPL I ++E + +YG G+N+RDWL+VEDH Sbjct: 118 YFHTYDLPVVLSNCSNNYGPAQYPEKLIPLFIKNIVENKPLPVYGKGENIRDWLFVEDHA 177 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPG 289 A+ L+L +GRIGE Y IGGNNE +NID+V + + D L+ ++ + LI ++ DR G Sbjct: 178 TAIDLILHQGRIGETYAIGGNNEIRNIDMVHTLIEVTDRLLGRNEGASLSLISYVTDRLG 237 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 HD RYAID+SKIK E+GW P+ + + KTV +L Sbjct: 238 HDFRYAIDASKIKKELGWSPKTKFKEAIEKTVTSFL 273 >gi|68644634|emb|CAI34685.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVIGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAT--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|325571037|ref|ZP_08146609.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus ATCC 12755] gi|325156122|gb|EGC68308.1| dTDP-glucose 4,6-dehydratase [Enterococcus casseliflavus ATCC 12755] Length = 351 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/346 (45%), Positives = 207/346 (59%), Gaps = 36/346 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+VN +I V V+DKLTYAGN +L + + + + DI Sbjct: 12 KIIVTGGAGFIGSNFVHYVVNHHPEIHVTVLDKLTYAGNKENLAGLPKDRV-ELVVGDIA 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ Q DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 71 DSALVDQLVQ--QTDAVVHYAAESHNDNSLKDPFPFVQTNLIGTYTLIEACR-------- 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGL----------FSEDMPYNPSSPYSATKASSDYLV 168 K R+ +STDEVYG L K L F++ PYNPSSPYS+TKA SD LV Sbjct: 121 --KYDVRYHHVSTDEVYGDLPLRKDLPGHGEGPGEKFTDQTPYNPSSPYSSTKAGSDLLV 178 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++G+ LSNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ D Sbjct: 179 KAWVRSFGLRATLSNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGEGKNVRDWIHTND 238 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDR 287 H A++ +L KGRIGE Y IG + E N ++ I L+ PK +Y H + DR Sbjct: 239 HSSAVWTILTKGRIGETYLIGADGEADNKSVIETILTLMGE--PKDAYDH------VTDR 290 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 PGHD RYAID+SK+K E+GW P + E GL T+ WY +N WW+ Sbjct: 291 PGHDLRYAIDASKLKEELGWQPMFTDFEEGLADTIDWYRNNPSWWQ 336 >gi|191638980|ref|YP_001988146.1| RmlB [Lactobacillus casei BL23] gi|190713282|emb|CAQ67288.1| RmlB [Lactobacillus casei BL23] gi|215272231|dbj|BAG84630.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei] gi|327383033|gb|AEA54509.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei LC2W] gi|327386220|gb|AEA57694.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei BD-II] Length = 341 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 149/349 (42%), Positives = 208/349 (59%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + ++Q++V+DKLTYAGN ++ ++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYRHHPEVQMIVLDKLTYAGNKANIADL-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + + D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKAVVDKWMAKV--DTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N ++ I L+D T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEKDNKTVLELILKLMDKP-------TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY ++ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTEHRDWWQ 326 >gi|2804691|gb|AAC38679.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804697|gb|AAC38684.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804704|gb|AAC38690.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] gi|2804716|gb|AAC38700.1| dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae] Length = 349 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/348 (44%), Positives = 202/348 (58%), Gaps = 42/348 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 -KYDIRFHHVSTDEVYGDLPLREDLLGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIRFIE 285 ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H + Sbjct: 234 SSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH------VT 282 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 283 DRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|169630859|ref|YP_001704508.1| dTDP-glucose 4,6-dehydratase RmlB [Mycobacterium abscessus ATCC 19977] gi|169242826|emb|CAM63854.1| DTDP-glucose 4,6-dehydratase RmlB [Mycobacterium abscessus] Length = 331 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 145/339 (42%), Positives = 199/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ V + + V V+D LTYAG+ SL ++ + +Q DI Sbjct: 1 MRILVTGGAGFIGANFVHATVRERPDVSVTVLDALTYAGSSESLAPVAAA--VQLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + + + D +V+FAAE+H D S+ F+ +NIIGT+ LLE R Sbjct: 59 CDPDTVERLVAD--SDVVVHFAAETHNDNSLADPSPFLRSNIIGTYTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + Q R ISTDEV+G L D F+E PYNPSSPYSATKAS+D LV AW ++G Sbjct: 110 ---RHQVRLHHISTDEVFGDLELDDPNRFTETTPYNPSSPYSATKASADLLVRAWIRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 ISATISNCSNNYGPYQHVEKFIPRQITNILTGRRPRLYGAGANVRDWIHVDDHNSAVWRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ G IG Y IG + ER N+ ++ I L+ ++ + DR GHD RYAI Sbjct: 227 IEAGTIGRTYLIGADGERDNLSVLHTILELMG-------KSSDDFDHVTDRAGHDLRYAI 279 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 D + ++ E+GW P + GL T+ WY N WWRP+ Sbjct: 280 DPTPLRDELGWKPTHSDFTGGLAATIDWYRRNEEWWRPI 318 >gi|329766677|ref|ZP_08258220.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136932|gb|EGG41225.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 334 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 209/337 (62%), Gaps = 22/337 (6%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+ ++ GG GFIGSA R +L N+ +++ ID ++ N +L + ++N + + DI Sbjct: 1 MKFLICGGYGFIGSAFIRNHLENNPHDEIINIDNMSLGSNKANLDIVRKNNNYLHEKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + K+ D I+NFAAE+HVDRSI FI TNI+GT+ LLE + Sbjct: 61 LNLKLVEKLSKDV--DVIINFAAETHVDRSISNPKPFIDTNILGTYSLLEAS-------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K ++ F+ ISTDE+YG L+ G F+E PS+PYSATKAS+D LV A+ TY Sbjct: 111 --KNNEKLFVHISTDEIYGDLEIGQKPFTEFDNLKPSNPYSATKASADLLVQAYVRTYKN 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +++ C+NN+GP+ FPEKLIP I R + V LYGDG VR W++V DH++A+ L++ Sbjct: 169 KCIITRCTNNFGPFQFPEKLIPKTIIRAHKNLKVPLYGDGNQVRSWIHVVDHIKAVDLLV 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KKG IGE YNI NE N +IV + ++ K +LI F+ DRPGHD+RY+ID Sbjct: 229 KKGSIGEIYNISAWNEISNKEIV-------EKILNKMKKPLDLIEFVNDRPGHDKRYSID 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KI+ EIGW P + E L++TV WYL N WW+PL Sbjct: 282 FTKIQKEIGWSPTYDFEKALDETVTWYLSNEKWWKPL 318 >gi|315445936|ref|YP_004078815.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] gi|315264239|gb|ADU00981.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] Length = 335 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/339 (43%), Positives = 199/339 (58%), Gaps = 22/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V D ++V V+D LTYAG+ SL + +Q DI Sbjct: 1 MRLLVTGGAGFIGANFVLATVRDRPDVRVTVLDSLTYAGSRESLAGVDTQ--IRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E DA+V+FAAE+HVD ++ + F+ +NI+GTF +LE R Sbjct: 59 TDADLVGRLVGE--SDAVVHFAAETHVDNALADPEPFVRSNIVGTFTILEAVR------H 110 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R +STDEVYG L D F+E PYNPSSPYS+TKA+SD LV AW +Y Sbjct: 111 ATASRPVRLHHVSTDEVYGDLELGDPAKFTESTPYNPSSPYSSTKAASDMLVRAWVRSYR 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGP+ EK IP IT ++ G LYG G NVRDW++VEDH A++ + Sbjct: 171 LTATLSNCSNNYGPFQHVEKFIPRQITNILTGRRPKLYGTGANVRDWIHVEDHNSAVWKI 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G +G Y IG + E N+ ++ I L+D P + H + DR GHD RYAI Sbjct: 231 LTHGAVGRTYLIGADGECDNLTVMRTILRLMDR-SPDDFDH------VTDRAGHDLRYAI 283 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 D++ ++ E+GW P + E+GL T+ WY N WW P+ Sbjct: 284 DATPLRDELGWRPAHRDFEAGLRDTIDWYRHNRSWWGPI 322 >gi|292656187|ref|YP_003536084.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] gi|291371297|gb|ADE03524.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] Length = 310 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 151/328 (46%), Positives = 208/328 (63%), Gaps = 19/328 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS RYL+++ V+ +D LTYAG+ ++L F++ DI Sbjct: 1 MDVLVTGGAGFIGSNFVRYLLDNSDDSVVTLDALTYAGSRDNLAGYLDHPNHRFVEGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + + D IVNFAAESHVDRSI GA+ F++TN+ GT LL+ + L Sbjct: 61 DRELVDDLVAD--ADVIVNFAAESHVDRSIGGAEPFVSTNVQGTQTLLD------AALDA 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D RFLQISTDEVYG + G F+ED P P +PYSATKA +D LV ++ T+ +P L Sbjct: 113 DID---RFLQISTDEVYGEIHDGKFTEDDPLAPRNPYSATKAGADLLVRSYRETHDLPTL 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ NN+GP PEKLIP I R G + +YGDG NVR+W+YVED+ AL +VL++G Sbjct: 170 ITRTCNNFGPRQHPEKLIPKFIQRAANGETLPVYGDGSNVREWIYVEDNCAALDVVLREG 229 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIG E N++ +I L+A+ + I F+EDR GHD+RYAID++K Sbjct: 230 DIGEVYNIGSGVELSNLETTEKI---LEAV----GGSEDQIEFVEDRAGHDQRYAIDATK 282 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNN 328 K+ +GW P+ + E GL V +YL ++ Sbjct: 283 TKA-LGWEPEWSFEDGLEACVDYYLGDD 309 >gi|118467903|ref|YP_885894.1| dTDP-glucose 4,6-dehydratase [Mycobacterium smegmatis str. MC2 155] gi|310947298|sp|A0QSK6|RMLB_MYCS2 RecName: Full=dTDP-glucose 4,6-dehydratase gi|118169190|gb|ABK70086.1| dTDP-glucose 4,6-dehydratase [Mycobacterium smegmatis str. MC2 155] Length = 331 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 201/339 (59%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ + + + + V+D LTYAG+ SL ++ + +Q DI Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVA--DRIRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + E DA+V+FAAE+HVD ++ + F+ +N++GT+ +LE R Sbjct: 59 TDAALVGDLVAE--SDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R +STDEVYG L+ F+E PYNPSSPYS+TKA++D LV AW +YG Sbjct: 110 ---RHNVRLHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G IG Y IG ER N+ ++ I L+ P + H + DR GHD RYAI Sbjct: 227 LTDGTIGRTYLIGAECERNNLTVMRTILKLM-GRDPDDFDH------VTDRAGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S ++ E+GW P+ + E+GL T+ WY N WWRPL Sbjct: 280 DPSTLQDELGWAPKHTDFEAGLTDTIDWYRANESWWRPL 318 >gi|262282421|ref|ZP_06060189.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. 2_1_36FAA] gi|262261712|gb|EEY80410.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. 2_1_36FAA] Length = 348 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 207/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLVAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK+++E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRNELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|224812403|gb|ACN64841.1| PokS2 [Streptomyces diastatochromogenes] Length = 329 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/334 (43%), Positives = 204/334 (61%), Gaps = 28/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 R++VTGGAGFIGS R ++ +V V+DKLTYAGN +L E+ F+ Sbjct: 5 RILVTGGAGFIGSHYVRAVLAGEYPAFADAEVTVLDKLTYAGNPANLGEVR----CEFVW 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+CD E + + D +VNFAAESHVDRSI G+ EF+ TN++G LL+ + Sbjct: 61 GDLCDPELLSKVIP--GQDVVVNFAAESHVDRSIAGSAEFVRTNVLGVHALLQ------A 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 CL R +Q+STDEVYGS+D G + E+ P P SPY+A+KA D + A+ T+G Sbjct: 113 CLEAGTP---RVVQVSTDEVYGSIDAGSWDEEAPLRPRSPYAASKAGGDLVARAYAVTHG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV ++ C NNYGP +PEK+IPL ITR++EG V LYGDG NVRDW++VEDH R + LV Sbjct: 170 LPVSITRCGNNYGPRQYPEKVIPLFITRLLEGRKVPLYGDGGNVRDWVHVEDHCRGVQLV 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++G GE Y+I G E N L + L+ +++ + DR GHDRRY++ Sbjct: 230 AERGEPGEIYHIAGTAELTNRQ-------LTERLLEACGRDWDMVEHVTDRKGHDRRYSL 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D K+++ +G+ P+ +GL +TV WY D+ W Sbjct: 283 DDGKLRA-LGFAPRIPFATGLAETVRWYADHPEW 315 >gi|302523259|ref|ZP_07275601.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB78] gi|302432154|gb|EFL03970.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB78] Length = 331 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 139/342 (40%), Positives = 209/342 (61%), Gaps = 23/342 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L + ++ D LTYAG +L +++ + +F++ D+ D Sbjct: 4 LLVTGAAGFIGSHFTRYWLEKHPEDSLVAFDTLTYAGVRANLADVA--DRITFVRGDVTD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + + +VNFAAESH ++L D F TN++GT LLE +R Sbjct: 62 GPLVARTLAEHRVEVVVNFAAESHNSLAVLAPDRFFRTNVLGTQTLLEASR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF +ST EVYG L + F+E+ PY P +PYSA+KA +D++V A+ TYG+P Sbjct: 113 RLGVARFHHVSTCEVYGDLALDAEEAFTEESPYRPRTPYSASKAGADHVVRAYHETYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L+N +NNYG + FPEK++PL TR ++G + +Y +N R+W++V DHVRA+ VL Sbjct: 173 VTLTNSANNYGSHQFPEKVLPLFTTRALDGLDLPVYASRENRREWVHVRDHVRAIAAVLH 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GRIGE Y++G E +G L + ++ + L+R + DRPGHDRRY +DS Sbjct: 233 AGRIGETYHVGTGTE-------LSVGALAEHVLTELGLPLSLVRTVPDRPGHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 SK+++E+GW P+ ++ +GL +T+ WY + WW PL + L P Sbjct: 286 SKLRAELGWRPRVDLATGLRETIQWYARHRAWWEPL-RGLSP 326 >gi|169832836|ref|YP_001693878.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae Hungary19A-6] gi|168995338|gb|ACA35950.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae Hungary19A-6] Length = 349 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/348 (42%), Positives = 203/348 (58%), Gaps = 40/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+D+LTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFTDVHVTVLDRLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVT 282 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 283 DRAGHDLRYAIDASKLREELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|325687673|gb|EGD29694.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK72] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWVPEFTNFEAGLKETIKWYTDNREWWK 330 >gi|84489908|ref|YP_448140.1| dTDP-D-glucose 4,6-dehydratase [Methanosphaera stadtmanae DSM 3091] gi|84373227|gb|ABC57497.1| predicted dTDP-D-glucose 4,6-dehydratase [Methanosphaera stadtmanae DSM 3091] Length = 316 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/329 (44%), Positives = 211/329 (64%), Gaps = 26/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++++TGGAGFIGS Y+ N ++ V+DKLTYAG++ +++ + F++ DI Sbjct: 4 LKIMITGGAGFIGSNFVHYIANKYDDYEITVLDKLTYAGDMTNIEGVD----LKFIKGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + A+K+ D +VNFAAE+HVD+SI F+ ++++GT LLE R Sbjct: 60 ASEKEASEAMKD--ADYVVNFAAETHVDKSITDPASFVKSDVLGTQNLLELVR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D +++QISTDEVYGS+ G F E +PSSPYSA+KA D LV A+ TY IPV Sbjct: 111 --KYDVEKYIQISTDEVYGSILDGSFKETDNIDPSSPYSASKAGGDLLVNAYYKTYDIPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SNN+GP FPEKLIPL I + I + +YGDG+NVRDW+YVED+ + VL K Sbjct: 169 MITRSSNNFGPRQFPEKLIPLFILKAIHNESLPVYGDGKNVRDWIYVEDNCAGVDTVLHK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+IGE YNIGG NER N++I +L+ L P+S LI ++DR GHDRRY++D+ Sbjct: 229 GKIGEVYNIGGGNERNNLEIT---KLILEKLNKPES-----LITHVDDRLGHDRRYSLDA 280 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K ++GW P+ E + +TV WY +N Sbjct: 281 SKTK-KLGWEPKWTFEDAMEETVNWYKNN 308 >gi|296168675|ref|ZP_06850424.1| dTDP-glucose-4,6-dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896584|gb|EFG76225.1| dTDP-glucose-4,6-dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 331 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/339 (44%), Positives = 197/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + + V V+D +TYAG SL ++ + + DI Sbjct: 1 MRLLVTGGAGFIGANFVHSTVREHPEDSVTVLDAMTYAGRRESLADVEDA--IRLVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + S + E DA+V+FAAESHVD ++ F+ TN++GTF +LE R Sbjct: 59 CDAELVSSLVAE--SDAVVHFAAESHVDNALDDPAPFLHTNVVGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+E PYNPSSPYSATKA +D LV AW +YG Sbjct: 110 ---RHGGRLHHISTDEVYGDLELDDPHRFTESTPYNPSSPYSATKAGADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGSGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG IG Y I ER N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 227 LEKGEIGRTYLISSEGERNNLSVLRTLLKMM-GRDPDDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ + E GL T+ WY N WWRPL Sbjct: 280 DPSTLYDELCWAPKHTDFEEGLGATIDWYRANESWWRPL 318 >gi|55821249|ref|YP_139691.1| dTDP-glucose-4,6-dehydratase [Streptococcus thermophilus LMG 18311] gi|55823161|ref|YP_141602.1| dTDP-glucose-4,6-dehydratase [Streptococcus thermophilus CNRZ1066] gi|116627988|ref|YP_820607.1| dTDP-glucose-4,6-dehydratase [Streptococcus thermophilus LMD-9] gi|55737234|gb|AAV60876.1| dTDP-glucose-4,6-dehydratase [Streptococcus thermophilus LMG 18311] gi|55739146|gb|AAV62787.1| dTDP-glucose-4,6-dehydratase [Streptococcus thermophilus CNRZ1066] gi|116101265|gb|ABJ66411.1| dTDP-glucose 4,6-dehydratase [Streptococcus thermophilus LMD-9] gi|312278577|gb|ADQ63234.1| dTDP-glucose 4,6-dehydratase [Streptococcus thermophilus ND03] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 203/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYGDG+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGRNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N ESGL +T+ WY D+ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFESGLEETIKWYTDHQDWWK 330 >gi|315640670|ref|ZP_07895774.1| dTDP-glucose 4,6-dehydratase [Enterococcus italicus DSM 15952] gi|315483566|gb|EFU74058.1| dTDP-glucose 4,6-dehydratase [Enterococcus italicus DSM 15952] Length = 350 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/344 (44%), Positives = 201/344 (58%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ + V V+DKLTYAGN +L + ++ + DI D Sbjct: 12 IIVTGGAGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNKENLAGLP-ADRVELVVGDIAD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +K Q DA+V++AAESH D S+ F+ TNI+GT+ LLE R Sbjct: 71 PEIVDQLVK--QTDAVVHYAAESHNDNSLKDPFPFVQTNIVGTYTLLEACR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L F+ PYNPSSPYS+TKA SD LV Sbjct: 120 -KYNVRYHHVSTDEVYGDLPLREDLPGHGDGPGEKFTAKTPYNPSSPYSSTKAGSDLLVR 178 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 179 AWVRSFGLQATISNCSNNYGPYQHIEKFIPRQITNVLSGIRPKLYGEGKNVRDWIHTNDH 238 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++ +L KG+IGE Y IG + E N V E+ L +Y H ++DR G Sbjct: 239 SSAVWTILTKGKIGETYLIGADGEEDN-KTVMELILELMGQDKHAYDH------VKDRAG 291 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW PQ N GL T+ WY D+ WW+ Sbjct: 292 HDLRYAIDSTKLREELGWKPQFTNFHDGLADTIQWYQDHEEWWK 335 >gi|41410323|ref|NP_963159.1| RmlB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466831|ref|YP_883541.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium 104] gi|254776838|ref|ZP_05218354.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium subsp. avium ATCC 25291] gi|41399157|gb|AAS06775.1| RmlB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168118|gb|ABK69015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium 104] Length = 331 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/339 (44%), Positives = 197/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + + V V+D LTYAG SL + S + DI Sbjct: 1 MRLLVTGGAGFIGANFVHSTVREHPEDSVTVLDALTYAGRRESLAGVEDS--IRLVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ G + F+ TN++GTF +LE R Sbjct: 59 TDAELVSRLVAE--SDAVVHFAAESHVDNALAGPEPFLHTNVVGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+E PYNPSSPYSATKA++D LV AW +YG Sbjct: 110 ---RHGVRLHHISTDEVYGDLELDDPNRFTESTPYNPSSPYSATKAAADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGTGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G IG Y I ER N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 227 LESGEIGRTYLISSEGERDNLTVLRTLLQMM-GRDPDDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ + E GL +T+ WY N WWRPL Sbjct: 280 DPSTLYDELCWAPKHTDFEEGLRETIDWYRANESWWRPL 318 >gi|220928521|ref|YP_002505430.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum H10] gi|219998849|gb|ACL75450.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum H10] Length = 337 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/332 (44%), Positives = 204/332 (61%), Gaps = 14/332 (4%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQVDIC 60 ++TGGAGFIGS RY++ + I ++ +DKLTYAGNL++L I+ +N + F DIC Sbjct: 5 LITGGAGFIGSNFIRYMLKNYNDIFIINVDKLTYAGNLDNLTGAPINDTN-YKFCCCDIC 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I K + D +VNFAAESHVDRS+ EFI TNI GT L+ + W Sbjct: 64 DKDKIEEIFKLHKIDYVVNFAAESHVDRSMTNTKEFIETNITGTVNLMNAAKKAWEIRED 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + +FLQISTDEVYGS + SE+ P NP +PYS +KA++D+ V + Y PV Sbjct: 124 EYINGVKFLQISTDEVYGSCTECC-SEESPLNPHNPYSCSKAAADFYVKFYWDAYKFPVS 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNNYGPY +PEKLIPL I IE + +YGDG +RDW+YVED+ RA+ LVL KG Sbjct: 183 ITRSSNNYGPYQYPEKLIPLMIHNTIENLMLPVYGDGMQMRDWIYVEDNCRAIDLVLHKG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 GE YNI + N F++D ++ K ++I + DR D Y+I + Sbjct: 243 EQGEIYNIATEKKYHN-------RFVVDKILTYIKGEVREDMILHVRDRKASDLCYSIST 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ ++GW P N ++GL+KT+ WYLDN W Sbjct: 296 KKIREKLGWSPSVNFDNGLDKTIQWYLDNKDW 327 >gi|332367030|gb|EGJ44770.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1059] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G +DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPVDA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|332362098|gb|EGJ39900.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK49] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DADLVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|254819211|ref|ZP_05224212.1| dTDP-glucose 4,6-dehydratase [Mycobacterium intracellulare ATCC 13950] Length = 331 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/339 (44%), Positives = 198/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + + V V+D LTYAG SL + + + DI Sbjct: 1 MRLLVTGGAGFIGANFVHSTVREHPEDSVTVLDALTYAGRRESLAGVEDA--IELVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ G + F+ TN++GTF +LE R + Sbjct: 59 TDAELVSRLVAE--SDAVVHFAAESHVDNALEGPEPFLHTNVVGTFTILEAVRRY----- 111 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R ISTDEVYG L D F+E PYNPSSPYSATKA++D LV AW +YG Sbjct: 112 -----GVRLHHISTDEVYGDLELDDPQRFTEATPYNPSSPYSATKAAADMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A+ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG IG Y I ER N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 227 LEKGEIGRTYLISSEGERDNLTVLRTLLQMM-GREPDDFDH------VTDRAGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S + E+ W P+ + E GL +T+ WY N WWRPL Sbjct: 280 DPSTLYDELCWAPKHTDFEEGLRETIDWYRANESWWRPL 318 >gi|225856103|ref|YP_002737614.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae P1031] gi|1944622|emb|CAB05932.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae] gi|68642282|emb|CAI32712.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|125857154|emb|CAI30307.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] gi|225724429|gb|ACO20281.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae P1031] gi|301793616|emb|CBW35996.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae INV104] gi|332204383|gb|EGJ18448.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae GA47901] Length = 349 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 202/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + Q DAIV++AAESH D S+ FI TN IG + LLE R Sbjct: 66 AELVDKLVA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGIYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + D Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|145225583|ref|YP_001136261.1| dTDP-glucose 4,6-dehydratase [Mycobacterium gilvum PYR-GCK] gi|145218069|gb|ABP47473.1| dTDP-glucose 4,6-dehydratase [Mycobacterium gilvum PYR-GCK] Length = 335 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/339 (43%), Positives = 199/339 (58%), Gaps = 22/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V D ++V V+D LTYAG+ SL + +Q DI Sbjct: 1 MRLLVTGGAGFIGANFVLATVRDRPDVRVTVLDSLTYAGSRESLAGVDTQ--IRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E DA+V+FAAE+HVD ++ + F+ +NI+GTF +LE R Sbjct: 59 TDADLVGRLVGE--SDAVVHFAAETHVDNALADPEPFVRSNIVGTFTILEAVR------H 110 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R +STDEVYG L D F+E PYNPSSPYS+TKA+SD LV AW +Y Sbjct: 111 AAASRPVRLHHVSTDEVYGDLELGDPAKFTESTPYNPSSPYSSTKAASDMLVRAWVRSYR 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGP+ EK IP IT ++ G LYG G NVRDW++VEDH A++ + Sbjct: 171 LTATLSNCSNNYGPFQHVEKFIPRQITNILTGRRPKLYGTGANVRDWIHVEDHNSAVWKI 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L G +G Y IG + E N+ ++ I L+D P + H + DR GHD RYAI Sbjct: 231 LTHGAVGRTYLIGADGECDNLTVMRTILRLMDR-SPDDFDH------VTDRAGHDLRYAI 283 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 D++ ++ E+GW P + E+GL T+ WY N WW P+ Sbjct: 284 DATALRDELGWRPAHSDFEAGLRDTIDWYSANESWWGPI 322 >gi|327461220|gb|EGF07553.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1057] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G +DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPVDA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|28849789|gb|AAN64546.1| dTDP-glucose-4,6-dehydratase [Streptococcus gordonii] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK+++E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRNELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|327463280|gb|EGF09601.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQEWWK 330 >gi|322385641|ref|ZP_08059285.1| dTDP-glucose 4,6-dehydratase [Streptococcus cristatus ATCC 51100] gi|321270379|gb|EFX53295.1| dTDP-glucose 4,6-dehydratase [Streptococcus cristatus ATCC 51100] Length = 348 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DADLVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|19909978|dbj|BAB87836.1| RhoH [Streptomyces violaceus] Length = 327 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 214/336 (63%), Gaps = 25/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 M + VTG AGFIGS R L++ +V V+DKLTYAG LN+L + +F+ Sbjct: 1 MNIPVTGAAGFIGSHFVRTLLSGGYPGHEDDRVTVVDKLTYAGTLNNLP--PRHPRLTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICD + + A+V+FAAESHVDRS+ GA+ F+ TN++GT LLE Sbjct: 59 HGDICDTPLLGKVFPGHE--AVVHFAAESHVDRSVAGAEAFVRTNVLGTQALLE------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F+Q+STDE YGS+ +G ++ED P P+SPY+A+KAS+D + ++ T+ Sbjct: 111 ---AALRHGTGVFVQVSTDETYGSIAEGSWTEDEPLLPNSPYAASKASADLIARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C+NNYGP PEKL+PL +TR+++G V LYGDG N+R+WL+V+DH RA+ L Sbjct: 168 GLDVRVTRCANNYGPGQHPEKLVPLFVTRLLDGQPVPLYGDGSNLREWLHVDDHCRAVRL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YNIGG N ++ G LL AL + + +L++ + DR GHD RYA Sbjct: 228 VLDEGRPGEIYNIGGGTHLTNKEMT---GRLL-ALCGRDW---DLVQRVADRKGHDFRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D SKI+ E+G+ P+ ++E GL +TV WY + W Sbjct: 281 VDDSKIRRELGYAPRWSLEDGLRETVEWYAAHRDHW 316 >gi|293553223|ref|ZP_06673860.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1039] gi|291602633|gb|EFF32848.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1039] Length = 342 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/344 (43%), Positives = 204/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + S+ + D+ D Sbjct: 4 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLP-SDRVELVVGDVAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +KE DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 63 AELVDRLVKE--ADAVVHYAAESHNDNSLKDPFPFVQTNIIGTYTLLEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 -KYNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLVK 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP +T ++ G LYG+G+NVRDW++ DH Sbjct: 171 AWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTNILSGIRPKLYGEGKNVRDWIHTNDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++L+L KGRIGE Y IG + E N V E+ + +Y H + DR G Sbjct: 231 SSAVWLILTKGRIGETYLIGADGEEDN-KTVMELILEMMGQPKDAYDH------VNDRAG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW P+ N GL T+ WY ++ WW+ Sbjct: 284 HDLRYAIDSTKLREELGWKPEFTNFRDGLADTIKWYEEHEDWWK 327 >gi|227550497|ref|ZP_03980546.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX1330] gi|257888524|ref|ZP_05668177.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,141,733] gi|257897101|ref|ZP_05676754.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium Com12] gi|257899040|ref|ZP_05678693.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium Com15] gi|293377324|ref|ZP_06623528.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium PC4.1] gi|293572518|ref|ZP_06683497.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E980] gi|227180398|gb|EEI61370.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX1330] gi|257824578|gb|EEV51510.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,141,733] gi|257833666|gb|EEV60087.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium Com12] gi|257836952|gb|EEV62026.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium Com15] gi|291607435|gb|EFF36778.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E980] gi|292644016|gb|EFF62122.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium PC4.1] Length = 342 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/344 (43%), Positives = 204/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + S+ + D+ D Sbjct: 4 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLP-SDRVELVVGDVAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +KE DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 63 AELVDRLVKE--ADAVVHYAAESHNDNSLKDPFPFVQTNIIGTYTLLEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 -KYDVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLVK 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP +T ++ G LYG+G+NVRDW++ DH Sbjct: 171 AWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTNILSGIRPKLYGEGKNVRDWIHTNDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++L+L KGRIGE Y IG + E N V E+ + +Y H + DR G Sbjct: 231 SSAVWLILTKGRIGETYLIGADGEEDN-KTVMELILEMMGQPKDAYDH------VNDRAG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW P+ N GL T+ WY ++ WW+ Sbjct: 284 HDLRYAIDSTKLREELGWQPEFTNFRDGLADTIKWYEEHEDWWK 327 >gi|228476914|ref|ZP_04061559.1| dTDP-glucose 4,6-dehydratase [Streptococcus salivarius SK126] gi|228251488|gb|EEK10633.1| dTDP-glucose 4,6-dehydratase [Streptococcus salivarius SK126] Length = 348 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 203/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N ESGL +T+ WY D+ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFESGLEETIKWYTDHQDWWK 330 >gi|125718223|ref|YP_001035356.1| dTDP-glucose-4,6-dehydratase [Streptococcus sanguinis SK36] gi|125498140|gb|ABN44806.1| DTDP-glucose-4,6-dehydratase, putative [Streptococcus sanguinis SK36] Length = 348 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/348 (43%), Positives = 204/348 (58%), Gaps = 40/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQPTDAYDHVT 282 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 283 DRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|145223883|ref|YP_001134561.1| dTDP-glucose 4,6-dehydratase [Mycobacterium gilvum PYR-GCK] gi|315444212|ref|YP_004077091.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] gi|145216369|gb|ABP45773.1| dTDP-glucose 4,6-dehydratase [Mycobacterium gilvum PYR-GCK] gi|315262515|gb|ADT99256.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. Spyr1] Length = 332 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 200/336 (59%), Gaps = 24/336 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAGFIGS +++ V V+DKLTYAGN SL + + L F+ D+ D Sbjct: 3 RLLVTGGAGFIGSNFVHHVLAHTDHHVTVLDKLTYAGNRASLDGLPERRL-DFVHGDVAD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + DA+V++AAESH D S+ + F+ +N+IGTF +LE R Sbjct: 62 ADLVDELVA--GTDAVVHYAAESHNDNSLDRPEPFLHSNVIGTFTVLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R +STDEVYG L D F+E PYNPSSPYS+TKA SD LV AW ++G+ Sbjct: 111 -RHGRRLHHVSTDEVYGDLELDDPARFTESSPYNPSSPYSSTKAGSDLLVRAWTRSFGVA 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ +DH A+ L+L+ Sbjct: 170 ATISNCSNNYGPYQHVEKFIPRQITNVLWGIRPRLYGEGRNVRDWIHADDHSSAVLLILE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KGRIGE Y IG N E+ N +V E+ L +Y + DR GHD RYAID Sbjct: 230 KGRIGETYLIGANGEKDNKTVV-ELILTLMGEDADAYDR------VPDRLGHDLRYAIDP 282 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +K++ E+GW P + E GL T+ WY + WW P Sbjct: 283 TKLREELGWQPGYGDFEHGLAATIEWYRTHEDWWTP 318 >gi|257880164|ref|ZP_05659817.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,230,933] gi|257882965|ref|ZP_05662618.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,502] gi|257885216|ref|ZP_05664869.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,501] gi|257891453|ref|ZP_05671106.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,410] gi|258614492|ref|ZP_05712262.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium DO] gi|293568261|ref|ZP_06679585.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1071] gi|294614672|ref|ZP_06694574.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1636] gi|294619031|ref|ZP_06698526.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1679] gi|294620974|ref|ZP_06700173.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium U0317] gi|257814392|gb|EEV43150.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,230,933] gi|257818623|gb|EEV45951.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,502] gi|257821068|gb|EEV48202.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,501] gi|257827813|gb|EEV54439.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,410] gi|291588973|gb|EFF20797.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1071] gi|291592410|gb|EFF24017.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1636] gi|291594692|gb|EFF26074.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1679] gi|291599432|gb|EFF30450.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium U0317] Length = 342 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/344 (43%), Positives = 204/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + S+ + D+ D Sbjct: 4 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLP-SDRVELVVGDVAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +KE DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 63 AELVDRLVKE--ADAVVHYAAESHNDNSLKDPFPFVQTNIIGTYTLLEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 -KYDVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLVK 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP +T ++ G LYG+G+NVRDW++ DH Sbjct: 171 AWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTNILSGIRPKLYGEGKNVRDWIHTNDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++L+L KGRIGE Y IG + E N V E+ + +Y H + DR G Sbjct: 231 SSAVWLILTKGRIGETYLIGADGEEDN-KTVMELILEMMGQPKDAYDH------VNDRAG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW P+ N GL T+ WY ++ WW+ Sbjct: 284 HDLRYAIDSTKLREELGWKPEFTNFRDGLADTIKWYEEHEDWWK 327 >gi|257893559|ref|ZP_05673212.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,408] gi|260560529|ref|ZP_05832703.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium C68] gi|261206556|ref|ZP_05921256.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TC 6] gi|289565466|ref|ZP_06445915.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium D344SRF] gi|293560231|ref|ZP_06676731.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1162] gi|314940008|ref|ZP_07847201.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133a04] gi|314941886|ref|ZP_07848750.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133C] gi|314950066|ref|ZP_07853353.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0082] gi|314952413|ref|ZP_07855419.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133A] gi|314993218|ref|ZP_07858598.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133B] gi|314997808|ref|ZP_07862720.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133a01] gi|257829938|gb|EEV56545.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium 1,231,408] gi|260073531|gb|EEW61859.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium C68] gi|260079266|gb|EEW66957.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TC 6] gi|289162795|gb|EFD10646.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium D344SRF] gi|291605803|gb|EFF35237.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium E1162] gi|313588180|gb|EFR67025.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133a01] gi|313592299|gb|EFR71144.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133B] gi|313595456|gb|EFR74301.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133A] gi|313599311|gb|EFR78156.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133C] gi|313640741|gb|EFS05321.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0133a04] gi|313643601|gb|EFS08181.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecium TX0082] Length = 342 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 151/344 (43%), Positives = 204/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + S+ + D+ D Sbjct: 4 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLP-SDRVELVVGDVAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +KE DA+V++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 63 AELVDRLVKE--ADAVVHYAAESHNDNSLKDPFPFVQTNIIGTYTLLEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 -KYDVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLVK 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP +T ++ G LYG+G+NVRDW++ DH Sbjct: 171 AWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTSILSGIRPKLYGEGKNVRDWIHTNDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++L+L KGRIGE Y IG + E N V E+ + +Y H + DR G Sbjct: 231 SSAVWLILTKGRIGETYLIGADGEEDN-KTVMELILEMMGQPKDAYDH------VNDRAG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW P+ N GL T+ WY ++ WW+ Sbjct: 284 HDLRYAIDSTKLREELGWQPEFTNFRDGLADTIKWYEEHEDWWK 327 >gi|157151431|ref|YP_001450300.1| dTDP-glucose 4,6-dehydratase [Streptococcus gordonii str. Challis substr. CH1] gi|157076225|gb|ABV10908.1| dTDP-glucose 4,6-dehydratase [Streptococcus gordonii str. Challis substr. CH1] Length = 348 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK+++E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRNELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|322372728|ref|ZP_08047264.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. C150] gi|322516603|ref|ZP_08069517.1| dTDP-glucose 4,6-dehydratase [Streptococcus vestibularis ATCC 49124] gi|321277770|gb|EFX54839.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. C150] gi|322124873|gb|EFX96297.1| dTDP-glucose 4,6-dehydratase [Streptococcus vestibularis ATCC 49124] Length = 348 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 203/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIYTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N ESGL +T+ WY D+ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFESGLEETIKWYTDHQDWWK 330 >gi|20091027|ref|NP_617102.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] gi|19916117|gb|AAM05582.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] Length = 321 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 215/335 (64%), Gaps = 20/335 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++VTGG GFIGS RY++ Q++ +DKLTYA N +L++I + F++ DI Sbjct: 4 LKMLVTGGCGFIGSNFIRYMLKKYPDYQIVNLDKLTYAENFANLRDIENKPNYFFVKGDI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + + + D +V+FAAESHVDRSI F+ TN++GT LL+ S L+ Sbjct: 64 CDPASVNEVMTKV--DQVVHFAAESHVDRSIEDGSVFVRTNVLGTNTLLQ------SALA 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +F+ +STDEVYGS +G F+E NPSSPYS++KASSD L ++ TYG+PV Sbjct: 116 NKIK---KFIHVSTDEVYGSAMEGSFTEMDNLNPSSPYSSSKASSDLLAKSYHTTYGLPV 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C+NN+GPY +PEKLIP I+R++EG V +YG G N+RDW+YVEDH A+ +L Sbjct: 173 CITRCTNNFGPYQYPEKLIPFFISRLMEGKKVPVYGTGLNIRDWIYVEDHCSAVDFILHN 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YNI G NE N++I LL L S I ++EDR GHD RY++D Sbjct: 233 GKSGEIYNIDGGNELTNLEITHR---LLKMLGKDESS----IEYVEDRKGHDFRYSLDGG 285 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ ++GW PQ + ++ L +T WY++N WWW PL Sbjct: 286 KLE-KMGWKPQYDFDTALEQTDSWYVENKWWWEPL 319 >gi|298346193|ref|YP_003718880.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii ATCC 43063] gi|315657303|ref|ZP_07910185.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236254|gb|ADI67386.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii ATCC 43063] gi|315491775|gb|EFU81384.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 330 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 148/337 (43%), Positives = 204/337 (60%), Gaps = 27/337 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V D V V+DKL YAGN S++ + + NL + D+ Sbjct: 1 MHVLVTGGAGFIGANFVHTTVEDYPDATVTVLDKLGYAGNPASIEGLDRVNL---VVGDL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + S +K+ D +V+FAAESH D S++ FI +N++GTF +LE R Sbjct: 58 ADRDLVDSLVKD--ADLVVHFAAESHNDNSLVDPSPFIYSNLVGTFHILEACR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+ + PY PSSPYSA+KA SD LV AW ++G Sbjct: 109 ---RHHVRLHHISTDEVYGDLALDDPHKFTPETPYLPSSPYSASKAGSDMLVRAWVRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT I+G LYGDG NVRDW++V DH A++ + Sbjct: 166 VEATISNCSNNYGPYQHVEKFIPRMITNRIDGVRPRLYGDGLNVRDWIHVLDHNTAVWAI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +GR+GE Y IG N E+ N+++V + ++ + H ++DRPGHDRRYAI Sbjct: 226 INQGRLGETYLIGANGEKNNLEVVQALNRMM-GFPEDDFDH------VKDRPGHDRRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 D++K+ E GW P+ + E GL T+ WY + WWR Sbjct: 279 DNTKLCEETGWTPRFTSFEEGLRDTIEWYTTHEDWWR 315 >gi|325694721|gb|EGD36627.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK150] gi|325695965|gb|EGD37856.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK160] gi|327470794|gb|EGF16250.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK330] Length = 348 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|121310081|dbj|BAF44346.1| dTDP-glucose-4,6-dehydratase [Streptococcus oralis] Length = 348 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 155/351 (44%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEAI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 ATLVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQEWWK 330 >gi|323127495|gb|ADX24792.1| dTDP-glucose-4,6-dehydratase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 347 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 149/344 (43%), Positives = 200/344 (58%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ ++ V V+DKLTYAGN +++EI N + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPEVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R + Sbjct: 64 AELVNELAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARHY------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L F+ D YNPSSPYS+TKA+SD +V Sbjct: 115 ---NIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTADTNYNPSSPYSSTKAASDLIVK 171 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 172 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 231 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 232 STGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRAG 284 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW PQ N GL T+ WY D+ WW+ Sbjct: 285 HDLRYAIDSTKLREELGWEPQFTNFSEGLEDTIKWYTDHQDWWK 328 >gi|307707841|ref|ZP_07644318.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis NCTC 12261] gi|307616101|gb|EFN95297.1| dTDP-glucose 4,6-dehydratase [Streptococcus mitis NCTC 12261] Length = 331 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 207/337 (61%), Gaps = 24/337 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS RYL K IQ+ ++D LTYA ++ +++++ + SF ++DI + Sbjct: 6 IVVTGGAGFIGSNFVRYLKETYKDIQITILDNLTYASSMKTIEDLLDDRV-SFYKLDIAN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + E D IV+FAAES D+S+ F+ +NI+GT LLE R Sbjct: 65 ELALSNYIDE-GVDLIVHFAAESFNDKSLHDTSVFVKSNIVGTHNLLELAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF ISTDEVYG K F+E YNPSSPY+ATKAS+D LV AW ++G+ Sbjct: 115 -KYDIRFHHISTDEVYGDFPLESKDKFTEKTQYNPSSPYAATKASADLLVKAWVRSFGVR 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY PEK IP IT ++ G LYG G N+RDW++V+DH RA+ ++ Sbjct: 174 ATISNCSNNYGPYQNPEKFIPRQITNLLTGQQAVLYGAGLNIRDWIHVKDHCRAIDTIID 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IGE Y IG NNER N++++ +I L E ++I DRPGHD RY ID+ Sbjct: 234 KGVIGETYLIGVNNERTNVEVLQKILLQLG-------KSQEDFKYIADRPGHDLRYGIDA 286 Query: 299 SKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPL 334 SK+ +E+G+ P + + GL + + WY ++ WW+ + Sbjct: 287 SKLYTELGFTPLYVDFDKGLKEVIHWYQEHEDWWQEM 323 >gi|6018308|gb|AAF01814.1|AF187532_10 putative dTDP-glucose-4,6-dehydratase [Streptomyces nogalater] Length = 350 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 148/341 (43%), Positives = 210/341 (61%), Gaps = 26/341 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-------IQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 ++VTG GFIGSA R L+ + ++V V+DKLTYAGNL +L + + + F+ Sbjct: 13 ILVTGAVGFIGSAYVRMLLENRAPGAGAPAVRVTVLDKLTYAGNLTNLDAV-RGDRLRFV 71 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D E + + D +V+FAAESHVDRSI AD+F+ TN++GT LL+ Sbjct: 72 RGDILDAELVDELMA--HSDQVVHFAAESHVDRSIRAADDFVLTNVVGTQRLLD------ 123 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L + F+ +STDEVYGS+ G + E+ P +P+SPY+A+KAS+D + A T+ Sbjct: 124 AALRHGVEP---FVLVSTDEVYGSIASGSWPEEHPLSPNSPYAASKASADLMAFACHRTH 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ CSNNYGP PEKLIP +T +++G V LYGDG+NVR+WL+VEDH R + L Sbjct: 181 GLDVRVTRCSNNYGPRQHPEKLIPRFVTNLLDGLPVPLYGDGRNVREWLHVEDHCRGVDL 240 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V GR G Y+IGG E N ++V G LL+ L +S +R + DR GHD RY+ Sbjct: 241 VRTAGRPGGVYHIGGGRELSNRELV---GMLLE-LCGADWSS---VRHVPDRKGHDLRYS 293 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D + + E+G+ P SGL TV WY +N WW PL + Sbjct: 294 LDWGRAREELGYRPAREFSSGLRSTVQWYRENRSWWEPLKR 334 >gi|325690528|gb|EGD32531.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK115] Length = 348 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|325673207|ref|ZP_08152900.1| dTDP-glucose-4,6-dehydratase [Rhodococcus equi ATCC 33707] gi|325556042|gb|EGD25711.1| dTDP-glucose-4,6-dehydratase [Rhodococcus equi ATCC 33707] Length = 331 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 26/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ + + ++V V+D LTYAG+ ++L+ + S F++ DI Sbjct: 1 MRVLVTGGAGFIGANFVHTTLRERPGVEVTVLDALTYAGSRDTLRSVDSS--IRFVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E D +V+FAAESH D S+ F+ TN+IGT+ LLE R Sbjct: 59 ADATVVGALVAE--SDFVVHFAAESHNDNSLSDPWPFVRTNVIGTYTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ +STDEVYG L D G F+E PYNPSSPYS+TKA+SD LV AW ++G Sbjct: 110 ---EHGVRYHHVSTDEVYGDLALDDPGKFTEHSPYNPSSPYSSTKAASDMLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + LSNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 VRATLSNCSNNYGPYQHIEKFIPRQITNILTGVRPKLYGAGLNVRDWIHVDDHNSAVWKI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G +G Y IG + E N+ +V I L+ P + H + DRPGHD RYAI Sbjct: 227 LEDGELGRTYLIGADGEVDNLTVVRTILELM-GRDPDGFEH------VTDRPGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 D+S ++ E+GW P+ + GL T+ WY DN WW Sbjct: 280 DASTLRDELGWSPRYTDFREGLAATIDWYQDNRAWW 315 >gi|323698128|ref|ZP_08110040.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. ND132] gi|323458060|gb|EGB13925.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans ND132] Length = 338 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 149/333 (44%), Positives = 200/333 (60%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-LFSFLQVD 58 M+L+VTGG GFIG+ R L ++ +DKLTYAGN +L +I ++ ++F+ D Sbjct: 1 MKLLVTGGCGFIGTNFIRLMLAAHPDWSIVNLDKLTYAGNCLNLLDIEKTEPRYAFVHGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICDR+ + L + DA+VNFAAESHVDRSI F+TTN+ G L+E R Sbjct: 61 ICDRDLVMDLLTDNGVDAVVNFAAESHVDRSINDPSPFVTTNVGGAQNLMECAR------ 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF+ +STDEVYG+L G F+E P P+SPYSA+KA +D + A+ TY Sbjct: 115 ---QCGIGRFVHVSTDEVYGTLGPSGKFTETTPLAPNSPYSASKAGADLMARAYFETYRF 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL++ CSNNYGPY FPEKLIPL + +YGDG NVRDW++V+DH R + L L Sbjct: 172 PVLITRCSNNYGPYQFPEKLIPLMYLNAKADKPLPVYGDGLNVRDWIFVDDHCRGVELTL 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GR G+ YN GG E NI +V L +++ K S LI + DRPGHD+RYA+D Sbjct: 232 TRGREGQVYNFGGAAEETNISVVRT----LLSIVGKPES---LITHVTDRPGHDKRYAMD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S E+G+ P GL +T+ WY N W Sbjct: 285 FSLAAEELGFAPTLPFAEGLARTIAWYEANGTW 317 >gi|298255293|ref|ZP_06978879.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502161|ref|YP_003724101.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae TCH8431/19A] gi|298237756|gb|ADI68887.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae TCH8431/19A] Length = 349 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 204/352 (57%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFTDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQDWWK 330 >gi|324991646|gb|EGC23579.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK353] Length = 348 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLRETIKWYTDNQDWWK 330 >gi|11095236|gb|AAG29802.1| dTDP-glucose 4,6-dehydratase [Streptomyces rishiriensis] Length = 336 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 150/339 (44%), Positives = 211/339 (62%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R + + Q+ V+DKLTY+GN +L I+ + F+ Sbjct: 1 MRLLVTGGAGFIGSEFVRATLRGVLPGSSGTQITVLDKLTYSGNELNLAPIADLETYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICDR + + DAIV+FAAE+HVDRSI GA F+ TN +GT +LLE Sbjct: 61 QGDICDRGLVDDVVAGH--DAIVHFAAETHVDRSIEGAASFVRTNALGTQVLLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ ISTDEVYGS+ +G ++E P P++PY+A KA+ D L LAW T Sbjct: 113 ---AASRHRLGRFVHISTDEVYGSISEGAWTEASPVAPNAPYAAAKAAGDLLALAWHRTR 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + V+++ C+NNYGPY +PEKLIPL T +++G V +YGDG N R WL+V DH RA+ Sbjct: 170 KLDVVVTRCTNNYGPYQYPEKLIPLFTTNLLDGQQVPVYGDGHNRRQWLHVSDHCRAIQC 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N++ L + ++ + + +R + DR GHD RY+ Sbjct: 230 VLLGGRPGEVYHIGGGTELTNLE-------LTEHILEACGAGWDRVRHVPDRLGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D++KI++E+G+ P+ GL +TV WY + WW PL Sbjct: 283 LDTTKIRTELGYSPRVAFADGLAETVEWYRTHRGWWEPL 321 >gi|168494598|ref|ZP_02718741.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC3059-06] gi|183575532|gb|EDT96060.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae CDC3059-06] gi|332203523|gb|EGJ17590.1| dTDP-glucose 4,6-dehydratase [Streptococcus pneumoniae GA47368] Length = 349 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 204/352 (57%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFTDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG++GE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQVGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQDWWK 330 >gi|73537109|gb|AAZ77689.1| ChlC2 [Streptomyces antibioticus] Length = 327 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 208/339 (61%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR VTGGAGFIG R L+ +V V+DKLTYA +L++L + +F+ Sbjct: 1 MRYFVTGGAGFIGGHYVRALLAGAYPGTAGCEVTVLDKLTYAAHLDNLP--LDHDRLTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD + L DA+V+FAAESHVDRS+ F+TTN++GT ILL+ Sbjct: 59 RGDICDAGLLADLLPGH--DAVVHFAAESHVDRSLADGTPFVTTNVLGTQILLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +C + RF+ +STDEVYGSL G ++ED P+SPY+A+KA+SD + A+ T Sbjct: 111 ACA---RTGVPRFVHVSTDEVYGSLRHGSWTEDTLLEPNSPYAASKAASDLMARAYWRTS 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + V ++ CSNNYG + F EK++PL +T +++G V LYGDG +VR+WL+VEDH RAL+L Sbjct: 168 DVAVSITRCSNNYGTHQFIEKVVPLFVTNLLDGLDVPLYGDGHHVREWLHVEDHCRALHL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL +GR GE YNIG + N ++ + L A + +R + DR HD RY+ Sbjct: 228 VLTEGRAGEIYNIGAGDGLTNRELTQRLLTLCGADWSR-------VREVPDRTAHDERYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D++KI+ E+G+ P+ ++ GL V WY DN WW PL Sbjct: 281 VDTAKIREELGFTPRIGLDEGLADVVAWYRDNRAWWEPL 319 >gi|312862840|ref|ZP_07723080.1| dTDP-glucose 4,6-dehydratase [Streptococcus vestibularis F0396] gi|311101700|gb|EFQ59903.1| dTDP-glucose 4,6-dehydratase [Streptococcus vestibularis F0396] Length = 348 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 203/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIYTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N ESGL +T+ WY D+ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFESGLEETIRWYTDHQDWWK 330 >gi|270293358|ref|ZP_06199567.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. M143] gi|270278207|gb|EFA24055.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. M143] Length = 348 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 VALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEVAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG N E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGANGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|24379855|ref|NP_721810.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus mutans UA159] gi|26007031|sp|P95780|RMLB_STRMU RecName: Full=dTDP-glucose 4,6-dehydratase gi|24377828|gb|AAN59116.1|AE014978_7 putative dTDP-glucose-4,6-dehydratase [Streptococcus mutans UA159] Length = 348 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ILLE R Sbjct: 66 SELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMSQPKNAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWK 330 >gi|68644417|emb|CAI34506.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI N + I D Sbjct: 7 IIVTGGAGFIGSNFVHYVYENFPGVHVTVLDKLTYAGNRANIEEI-LGNRVELVVGGIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KG+IGE Y IG + E+ N ++ L+ ++ + T+ + D Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEV-------LELILKEMGQATDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|227875199|ref|ZP_03993341.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris ATCC 35243] gi|269978089|ref|ZP_06185039.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris 28-1] gi|306818460|ref|ZP_07452183.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris ATCC 35239] gi|227844104|gb|EEJ54271.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris ATCC 35243] gi|269933598|gb|EEZ90182.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris 28-1] gi|304648633|gb|EFM45935.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris ATCC 35239] Length = 330 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 148/338 (43%), Positives = 202/338 (59%), Gaps = 27/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V + V VIDK+ YAGN S++ + + L + Sbjct: 1 MHVLVTGGAGFIGANFVHTTVEEHPDATVTVIDKIGYAGNPKSIEGLDRVKL---VVGST 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ + + +KE D +VNFAAESH D S++ FI +N++GTF LE R Sbjct: 58 EDKDLMDALVKE--SDLVVNFAAESHNDNSLVDPSPFIYSNLVGTFNTLEACR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + R ISTDEVYG L D F D PY PSSPYSA+KA SD LV AW ++G Sbjct: 109 ---RHRVRLHHISTDEVYGDLALDDPHKFEPDSPYRPSSPYSASKAGSDMLVRAWIRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGPY EK IP IT ++G LYGDG NVRDW++V DH A++ + Sbjct: 166 IEATISNCSNNYGPYQHVEKFIPRMITNRMDGVRPRLYGDGLNVRDWIHVLDHNTAVWAI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KGR+GE Y IG N E+ N+ +V + ++ + + + ++DRPGHDRRYAI Sbjct: 226 INKGRLGETYLIGANGEKNNLQVVQALNKMM------GFPEDDFDQ-VKDRPGHDRRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++K++ E GW P+ + E GL T+ WY N WWRP Sbjct: 279 DATKLREETGWEPKYTDFEEGLRHTIEWYQSNEAWWRP 316 >gi|304390047|ref|ZP_07372001.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326529|gb|EFL93773.1| dTDP-glucose 4,6-dehydratase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 330 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 148/344 (43%), Positives = 206/344 (59%), Gaps = 27/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V D V V+DKL YAGN S++ + + NL + D+ Sbjct: 1 MHVLVTGGAGFIGANFVHTTVEDYPDATVTVLDKLGYAGNPASIEGLDRVNL---VVGDL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + S +K+ D +V+FAAESH D S++ FI +N++GTF +LE R Sbjct: 58 ADRDLVDSLVKD--ADLVVHFAAESHNDNSLVDPSPFIYSNLVGTFHILEACR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D F+ + PY PSSPYSA+KA SD LV AW ++G Sbjct: 109 ---RHHVRLHHISTDEVYGDLALDDPHKFTPETPYLPSSPYSASKAGSDMLVRAWVRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT I+G LYGDG NVRDW++V DH A++ + Sbjct: 166 VEATISNCSNNYGPYQHVEKFIPRMITNRIDGVRPRLYGDGLNVRDWIHVLDHNTAVWAI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +GR+GE Y IG N E+ N+++V + ++ + H ++DRPGHDRRYAI Sbjct: 226 INQGRLGETYLIGANGEKNNLEVVQALNRMM-GFPEDDFDH------VKDRPGHDRRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D++K+ E GW P+ + + GL T+ WY + WWR E + Sbjct: 279 DNTKLCEETGWTPRFTSFDEGLRDTIEWYTTHEDWWRGAKAETE 322 >gi|333022935|ref|ZP_08450999.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces sp. Tu6071] gi|332742787|gb|EGJ73228.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces sp. Tu6071] Length = 331 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 139/342 (40%), Positives = 208/342 (60%), Gaps = 23/342 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L + ++ D LTYAG +L +++ + +F++ D+ D Sbjct: 4 LLVTGAAGFIGSHFTRYWLEKHPEDSLVAFDALTYAGVRANLADVA--DRITFVRGDVTD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + + +VNFAAESH ++L D F TN++GT LLE +R Sbjct: 62 GPLVARTLAEHRVEVVVNFAAESHNSLAVLAPDRFFRTNVLGTQTLLEASR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF +ST EVYG L + F+E+ PY P +PYSA+KA +D+ V A+ TYG+P Sbjct: 113 RLGVARFHHVSTCEVYGDLALDAEEAFTEESPYRPRTPYSASKAGADHAVRAYHETYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L+N +NNYG + FPEK++PL TR ++G + +Y +N R+W++V DHVRA+ VL Sbjct: 173 VTLTNSANNYGSHQFPEKVLPLFTTRALDGLDLPVYTSRENRREWIHVRDHVRAIAAVLH 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GRIGE Y++G E +G L + ++ + L+R + DRPGHDRRY +DS Sbjct: 233 AGRIGETYHVGTGTE-------LSVGALAEHVLTELGLPLSLLRTVPDRPGHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 SK+++E+GW P+ ++ +GL +T+ WY + WW PL + L P Sbjct: 286 SKLRAELGWRPRVDLATGLRETIQWYARHRAWWEPL-RGLSP 326 >gi|319947196|ref|ZP_08021430.1| dTDP-glucose 4,6-dehydratase [Streptococcus australis ATCC 700641] gi|319747244|gb|EFV99503.1| dTDP-glucose 4,6-dehydratase [Streptococcus australis ATCC 700641] Length = 348 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 202/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDQLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N E+GL +T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFEAGLEETIKWYTDNQDWWK 330 >gi|160881430|ref|YP_001560398.1| dTDP-glucose 4,6-dehydratase [Clostridium phytofermentans ISDg] gi|160430096|gb|ABX43659.1| dTDP-glucose 4,6-dehydratase [Clostridium phytofermentans ISDg] Length = 330 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 8/324 (2%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVI--DKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTGGAGFIG+ +YL V VI DKLTYAGN L+ + F+Q DI D+ Sbjct: 6 VTGGAGFIGTNFIKYLFESHGEDVRVINYDKLTYAGNREWLEAFEGKKNYRFVQGDILDK 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + KE D +V+ AAESHVDRS+ EF TN+IGT +L + W DK Sbjct: 66 ELLTTIFKEEGIDFVVHLAAESHVDRSLQSDIEFFQTNVIGTRMLYQVIHNVWKDDISDK 125 Query: 123 KDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L +STDEVYG L++ G F E MP +P++PYSA+KA + + +A+ TYG+P++ Sbjct: 126 ----RILHVSTDEVYGELEESGQFIEHMPLHPNNPYSASKAGGEMVAIAYRKTYGLPIVR 181 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + CSNN+GPY EKLIP I + + +YGDG+N+R+WL+V+DH A+ VL G Sbjct: 182 TRCSNNFGPYQHEEKLIPKCIKNCLNHKKIPVYGDGENIREWLFVKDHCIAMDTVLLTGE 241 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIG + E + IV I L + S S +LI F EDR GHD+RYA+D++KI Sbjct: 242 LGEVYNIGSHQEMSTLHIVTTILQYLKEHVDSSLS-MDLIEFTEDRLGHDKRYAVDTNKI 300 Query: 302 KSEIGWFPQENMESGLNKTVCWYL 325 ++ + W P+ + E+G+ T+ WYL Sbjct: 301 ETNLNWTPKTDFENGMAVTIDWYL 324 >gi|309812220|ref|ZP_07705978.1| dTDP-glucose 4,6-dehydratase [Dermacoccus sp. Ellin185] gi|308433907|gb|EFP57781.1| dTDP-glucose 4,6-dehydratase [Dermacoccus sp. Ellin185] Length = 341 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 152/346 (43%), Positives = 204/346 (58%), Gaps = 30/346 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG V + + +++V+D +TYAGN SL + + ++ DI Sbjct: 1 MQILVTGGAGFIGGNFVHLTVKERPEARIVVLDAMTYAGNERSLDGLGEH--VELVRGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + D +V+FAAESH D S+ F+ TNI+GT+ LLE R Sbjct: 59 ADAALVDRLVA--ASDLVVHFAAESHNDNSLAEPWPFVQTNIVGTYTLLEAAR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R+ ISTDEVYG L D F+E YNPSSPYS+TKA SD LV A ++G Sbjct: 110 ---KHDVRYHHISTDEVYGDLELDDPERFTEATAYNPSSPYSSTKAGSDMLVRACVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGP EK IP IT +I+G LYGDG NVRDW++V+DH A++ + Sbjct: 167 VRATISNCSNNYGPRQHIEKFIPRQITNLIDGVRPKLYGDGLNVRDWIHVDDHNAAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++GRIGE Y IG + E N +V I G DA + H + DRPGHDRRY Sbjct: 227 IERGRIGETYLIGADGELDNKTVVQAILTGMGRDA---DDFDH------VTDRPGHDRRY 277 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 AIDS+K++ E+GW P+ + E GL T+ WY DN WWRP E + Sbjct: 278 AIDSTKLREELGWSPRYTSFEEGLAATIQWYRDNESWWRPFKDETE 323 >gi|322374908|ref|ZP_08049422.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. C300] gi|321280408|gb|EFX57447.1| dTDP-glucose 4,6-dehydratase [Streptococcus sp. C300] Length = 348 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 155/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AVLVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLRETIKWYTDNQDWWK 330 >gi|191638939|ref|YP_001988105.1| RmlB [Lactobacillus casei BL23] gi|190713241|emb|CAQ67247.1| RmlB [Lactobacillus casei BL23] Length = 341 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 151/349 (43%), Positives = 209/349 (59%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + ++Q++V+DKLTYAGN ++ ++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYRHHPEVQMIVLDKLTYAGNKANIADL-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + + D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKAVVDKWMAKV--DTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEKDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY ++ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIEWYTEHRDWWQ 326 >gi|329115785|ref|ZP_08244502.1| dTDP-glucose 4,6-dehydratase [Streptococcus parauberis NCFD 2020] gi|326906190|gb|EGE53104.1| dTDP-glucose 4,6-dehydratase [Streptococcus parauberis NCFD 2020] Length = 348 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 148/344 (43%), Positives = 203/344 (59%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDQLA--VKADAIVHYAAESHNDNSLKDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L + F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 -KHNIRFHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETKYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVQATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KG+IGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 234 STGVWAILTKGQIGETYLIGADGEKNNKEV-------LELILEKMGQPKDGYDHVTDRAG 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDSSK++ E+GW P+ N ESGL +T+ WY ++ WW+ Sbjct: 287 HDLRYAIDSSKLRDELGWVPEFTNFESGLEETINWYKEHEDWWK 330 >gi|312864589|ref|ZP_07724820.1| dTDP-glucose 4,6-dehydratase [Streptococcus downei F0415] gi|311099716|gb|EFQ57929.1| dTDP-glucose 4,6-dehydratase [Streptococcus downei F0415] Length = 405 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 201/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI Sbjct: 63 HIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIA 121 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 122 DAELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAAR-------- 171 Query: 121 DKKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLV 168 K RF +STDEVYG L F+ D YNPSSPYS+TKA+SD +V Sbjct: 172 --KYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTPDTKYNPSSPYSSTKAASDLIV 229 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ D Sbjct: 230 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTND 289 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H ++ +L KG+IGE Y IG + E+ N ++ L+ ++ K + + DR Sbjct: 290 HSTGVWAILTKGQIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRA 342 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDSSK++ E+GW P+ N E+GL T+ WY D+ WW+ Sbjct: 343 GHDLRYAIDSSKLRQELGWTPEFTNFEAGLEDTIKWYTDHQDWWK 387 >gi|296876235|ref|ZP_06900288.1| dTDP glucose 4,6-dehydratase [Streptococcus parasanguinis ATCC 15912] gi|312867378|ref|ZP_07727587.1| dTDP-glucose 4,6-dehydratase [Streptococcus parasanguinis F0405] gi|322389833|ref|ZP_08063374.1| dTDP-glucose 4,6-dehydratase [Streptococcus parasanguinis ATCC 903] gi|296432740|gb|EFH18534.1| dTDP glucose 4,6-dehydratase [Streptococcus parasanguinis ATCC 15912] gi|311097079|gb|EFQ55314.1| dTDP-glucose 4,6-dehydratase [Streptococcus parasanguinis F0405] gi|321143414|gb|EFX38851.1| dTDP-glucose 4,6-dehydratase [Streptococcus parasanguinis ATCC 903] Length = 348 Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 150/348 (43%), Positives = 202/348 (58%), Gaps = 40/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 HIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 65 DAELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + Sbjct: 230 TNDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDRVT 282 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DR GHD RYAIDS+K++ E+GW PQ N E+GL T+ WY D+ WW+ Sbjct: 283 DRAGHDLRYAIDSTKLREELGWEPQFTNFEAGLEDTIKWYTDHQDWWK 330 >gi|195978345|ref|YP_002123589.1| dTDP-glucose 4,6-dehydratase RmlB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868324|ref|YP_002744272.1| dTDP-glucose-4,6-dehydratase [Streptococcus equi subsp. zooepidemicus] gi|195975050|gb|ACG62576.1| dTDP-glucose 4,6-dehydratase RmlB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225701600|emb|CAW98851.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus equi subsp. zooepidemicus] Length = 348 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N ++ V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNHHPEVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIYTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K E + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILDKMGQPKEAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ + GL +T+ WY D+ WWR Sbjct: 284 RAGHDLRYAIDSTKLRQELGWEPQFTDFSEGLEQTIQWYTDHQDWWR 330 >gi|225870741|ref|YP_002746688.1| dTDP-glucose-4,6-dehydratase [Streptococcus equi subsp. equi 4047] gi|225700145|emb|CAW94278.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus equi subsp. equi 4047] Length = 348 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 153/346 (44%), Positives = 204/346 (58%), Gaps = 38/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N ++ V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNHHPEVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AELVDQLAA--KADAIVHYAAESHNDNSLNDPSPFIYTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L F+ D YNPSSPYS+TKA+SD +V Sbjct: 115 -KYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTADTNYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPK-SYSHTELIRFIEDR 287 ++ +L KGRIGE Y IG + E+ N ++ + +LD + PK +Y H + DR Sbjct: 234 STGVWAILTKGRIGETYLIGADGEKNNKEV---LELILDKMGQPKDAYDH------VTDR 284 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS+K++ E+GW PQ + GL +T+ WY D+ WWR Sbjct: 285 AGHDLRYAIDSTKLRQELGWEPQFTDFSEGLEQTIQWYTDHQDWWR 330 >gi|332359733|gb|EGJ37550.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK355] Length = 348 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAS--RADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|332360988|gb|EGJ38792.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1056] Length = 413 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 71 KIIVTGGAGFIGSNFVHYVYNNFPNVHVTVLDKLTYAGNRANIEEILGDRV-ELVVGDIA 129 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 130 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 179 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 180 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 234 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 235 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 294 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 295 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 345 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 346 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 395 >gi|293364792|ref|ZP_06611509.1| dTDP-glucose 4,6-dehydratase [Streptococcus oralis ATCC 35037] gi|307703041|ref|ZP_07639988.1| dTDP-glucose 4,6-dehydratase [Streptococcus oralis ATCC 35037] gi|291316242|gb|EFE56678.1| dTDP-glucose 4,6-dehydratase [Streptococcus oralis ATCC 35037] gi|307623434|gb|EFO02424.1| dTDP-glucose 4,6-dehydratase [Streptococcus oralis ATCC 35037] Length = 348 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AVLVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDM 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWEPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|295835361|ref|ZP_06822294.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB74] gi|295825446|gb|EFG64254.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB74] Length = 331 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 142/342 (41%), Positives = 207/342 (60%), Gaps = 23/342 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L + ++ D LTYAG SL +++ + +F++ DI D Sbjct: 4 LLVTGAAGFIGSHFTRYWLEKHPEDSLVAFDALTYAGVRASLADVA--DRITFVRGDITD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + + +VNFAAESH ++L D F TN++GT LLE R Sbjct: 62 GPLVARTLAEHRVEVVVNFAAESHNSLAVLAPDRFFRTNVLGTQTLLEACR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF +ST EVYG L + F+E+ PY P +PYSA+KA +D+ V A+ TYG+P Sbjct: 113 RLGVARFHHVSTCEVYGDLALDAEEAFTEESPYQPRTPYSASKAGADHAVRAYHETYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L+N +NNYG + FPEK++PL TR ++G + +Y + R+W++V DHVRA+ VL Sbjct: 173 VTLTNSANNYGSHQFPEKVLPLFTTRALDGLDLPVYASRDHRREWIHVRDHVRAIAAVLY 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GRIGE Y++G E +G L + ++ + L+R + DRPGHDRRY +DS Sbjct: 233 AGRIGETYHVGTGTE-------LSVGDLAERVLGELGLPLSLMRTVPDRPGHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 SK+++E+GW P+ ++ +GL +TV WY D+ WW PL + L P Sbjct: 286 SKLRAELGWRPRVDLATGLGETVRWYADHRAWWEPL-RGLSP 326 >gi|324994659|gb|EGC26572.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK678] gi|327474887|gb|EGF20292.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK408] gi|327490013|gb|EGF21802.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1058] gi|328946486|gb|EGG40626.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK1087] Length = 348 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 6 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIA 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 65 DAALVDKLAS--RADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 170 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 229 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 230 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 280 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|251782675|ref|YP_002996978.1| dTDP-glucose 4,6-dehydratase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391305|dbj|BAH81764.1| dTDP-glucose 4,6-dehydratase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 350 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ ++ V V+DKLTYAGN +++EI + + DI D Sbjct: 8 IIVTGGAGFIGSNFVHYVYNNHPEVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 67 AELVNELAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 116 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 171 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 172 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 231 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 232 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 284 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL T+ WY D+ WW+ Sbjct: 285 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEDTIKWYTDHQDWWK 331 >gi|324994021|gb|EGC25940.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis SK405] Length = 413 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 71 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEILGDRV-ELVVGDIA 129 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 130 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 179 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 180 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 234 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 235 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 294 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 295 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 345 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 346 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 395 >gi|1813347|dbj|BAA11249.1| dTDP-glucose-4,6-dehydratase [Streptococcus mutans] Length = 348 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNHANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 SELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMSQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWK 330 >gi|260662864|ref|ZP_05863758.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] gi|260552945|gb|EEX25944.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] Length = 310 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 201/322 (62%), Gaps = 18/322 (5%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS RY L +D +V+ +D LTYAGNL ++ +++ + + F+Q DI Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHDPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L Q D +VNFAAESHVDRSI F++TN++G +LL+ R Sbjct: 61 RDAATVSEVLATHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + Q R +Q+STDEVYGS+ G E+ P PSSPY+ATKAS+D L +A HT+G V Sbjct: 114 ---RAQVRLVQVSTDEVYGSIVAGRVDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +NNYGP PEKL+P+ IT + + + G G ++RDWLYV D+ +A+ LV++K Sbjct: 171 VITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG R +++V + LL P S + + +R GHD RYA+D + Sbjct: 231 GVEGEVYNIGGFERRTVLEVVASLQALLG--FPDSQ-----VVHVAERLGHDHRYAVDDT 283 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 K++ +GW P ++ +GL +TV Sbjct: 284 KLRRALGWQPSTSLAAGLTQTV 305 >gi|323351361|ref|ZP_08087017.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis VMC66] gi|322122585|gb|EFX94296.1| dTDP-glucose 4,6-dehydratase [Streptococcus sanguinis VMC66] Length = 413 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 205/352 (58%), Gaps = 48/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI Sbjct: 71 KIIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEILGDRV-ELVVGDIA 129 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 130 DAALVDKLASE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR-------- 179 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSD 165 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 180 --KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASD 234 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 235 LIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIH 294 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELI 281 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 295 TNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH---- 345 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 346 --VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLRETIKWYTDNQDWWK 395 >gi|290580175|ref|YP_003484567.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus mutans NN2025] gi|254997074|dbj|BAH87675.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus mutans NN2025] Length = 348 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 201/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 SELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWK 330 >gi|38232978|ref|NP_938745.1| putative dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium diphtheriae NCTC 13129] gi|38199236|emb|CAE48867.1| Putative dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium diphtheriae] Length = 335 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 146/341 (42%), Positives = 201/341 (58%), Gaps = 33/341 (9%) Query: 2 RLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGS R L + +V V+DKLTYAGN +L + + DIC Sbjct: 5 RMLVTGGAGFIGSNFVRRVLATRPEYRVTVLDKLTYAGNAANLDGCDATLVVG----DIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + D +V+FAAESH D S++ F+ TN++GTF LLE R Sbjct: 61 DAQLVDRLVAD--SDVVVHFAAESHNDNSLVDPSPFVQTNVVGTFTLLEAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF +STDEV+G L D F+E PYNPSSPYSATKA SD+LV AW ++G+ Sbjct: 111 --RHDVRFHHVSTDEVFGDLELDDPNRFTEHTPYNPSSPYSATKAGSDHLVRAWVRSFGL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +S+CSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ +L Sbjct: 169 RATISHCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHNDAVIRIL 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GRIG+ Y IG +N+ N V I + + + + H + DRPGHD RYA+D Sbjct: 229 ESGRIGQTYIIGADNDHVNNKTV--ITLICELMGADGFEH------VADRPGHDMRYAMD 280 Query: 298 SSKIKSEIGWFPQ-----ENMESGLNKTVCWYLDNNWWWRP 333 SS +++E+GW P+ M GL +T+ WY + WW P Sbjct: 281 SSTLRAELGWQPRFTDTDTGMREGLLQTIEWYRTHRDWWEP 321 >gi|318059072|ref|ZP_07977795.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SA3_actG] gi|318077777|ref|ZP_07985109.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SA3_actF] Length = 331 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 138/342 (40%), Positives = 207/342 (60%), Gaps = 23/342 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTG AGFIGS RY L + ++ D LTYAG +L +++ + +F++ D+ D Sbjct: 4 LLVTGAAGFIGSHFTRYWLEKHPEDSLVAFDALTYAGVRANLADVA--DRITFVRGDVTD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L + + +VNFAAESH ++L D F TN++GT LLE +R Sbjct: 62 GPLVARTLAGHRVEVVVNFAAESHNSLAVLAPDRFFRTNVLGTQTLLEASR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF +ST EVYG L + F+E+ PY P +PYSA+KA +D+ V A+ TYG+P Sbjct: 113 RLGVARFHHVSTCEVYGDLALDAEEAFTEESPYRPRTPYSASKAGADHAVRAYHETYGLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L+N +NNYG + FPEK++PL TR ++G + +Y +N R+W++V DHVRA+ VL Sbjct: 173 VTLTNSANNYGSHQFPEKVLPLFTTRALDGLDLPVYASRENRREWIHVRDHVRAIAAVLH 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GRIGE Y++G E +G L + ++ + L+R + DRPGHDRRY +DS Sbjct: 233 AGRIGETYHVGTGTE-------LSVGALAEHVLTELGLPLSLVRTVPDRPGHDRRYLLDS 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 SK+++E+GW P+ ++ +GL +T+ WY + WW PL + L P Sbjct: 286 SKLRAELGWRPRVDLATGLRETIQWYARHRAWWEPL-RGLSP 326 >gi|315221451|ref|ZP_07863372.1| dTDP-glucose 4,6-dehydratase [Streptococcus anginosus F0211] gi|315189570|gb|EFU23264.1| dTDP-glucose 4,6-dehydratase [Streptococcus anginosus F0211] Length = 348 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/351 (43%), Positives = 206/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN +++EI + + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNFPDVHITVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + K DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AAIVDQVAK--NADAIVHYAAESHNDNSLNDPRPFIDTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG+L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGALP---LREDLPGHGEGPGEKFTPETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGKIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK+++E+GW P+ N E+GL +T+ WY D+ WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRNELGWKPEFTNFEAGLKETIKWYTDHQDWWK 330 >gi|227502494|ref|ZP_03932543.1| dTDP-glucose 4,6-dehydratase [Corynebacterium accolens ATCC 49725] gi|306835068|ref|ZP_07468111.1| dTDP-glucose 4,6-dehydratase [Corynebacterium accolens ATCC 49726] gi|227076767|gb|EEI14730.1| dTDP-glucose 4,6-dehydratase [Corynebacterium accolens ATCC 49725] gi|304569049|gb|EFM44571.1| dTDP-glucose 4,6-dehydratase [Corynebacterium accolens ATCC 49726] Length = 334 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/341 (42%), Positives = 206/341 (60%), Gaps = 36/341 (10%) Query: 3 LIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ R + D +I VL DKLTYAGN ++L + ++ DI Sbjct: 4 MLVTGGAGFIGANFVRLMAKVRPDTRITVL--DKLTYAGNRDNLAGLD----VELVEGDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + D +V+FAAESH D S+ FI TN++GT+ LLE R + Sbjct: 58 ADATVVNPLVA--KADIVVHFAAESHNDNSLRDPSPFIHTNVVGTYTLLEACRTY----- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF +STDEV+G L+ G F+ED Y PSSPYSATKASSD+LV AW ++G Sbjct: 111 -----DVRFHHVSTDEVFGDLEIGADTNFTEDTAYAPSSPYSATKASSDHLVRAWVRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ + Sbjct: 166 LRATISNCSNNYGPYQHIEKFIPRQITNILSGHTPKLYGTGEQVRDWIHVDDHNAAVLKI 225 Query: 237 LKKGRIGERYNIGGN----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +++GRIGE YNIG + + ++ I+I+ EI + + L + DRPGHD+ Sbjct: 226 IEEGRIGETYNIGADQPDIDNKRIIEIICEI-------MGHTQGGRALYEHVADRPGHDQ 278 Query: 293 RYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RYA+D++K++ E+ W P+ ++ +GL T+ WY DN WWR Sbjct: 279 RYAMDATKLRRELDWRPRFTDIRAGLENTIAWYRDNETWWR 319 >gi|284031667|ref|YP_003381598.1| dTDP-glucose 4,6-dehydratase [Kribbella flavida DSM 17836] gi|283810960|gb|ADB32799.1| dTDP-glucose 4,6-dehydratase [Kribbella flavida DSM 17836] Length = 329 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 200/336 (59%), Gaps = 26/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS V ++V V+D LTYAG+ ++L +++ +F+ DICD Sbjct: 1 MLITGGAGFIGSNFVHDTVRRYPDVEVTVLDALTYAGSRSNLDPVAEQ--VTFVHGDICD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + D +V+FAAESHVD S+ FI +NIIGTF LLE R Sbjct: 59 AELVDKLVA--GTDVLVHFAAESHVDNSLNDPSPFIKSNIIGTFTLLEAVR--------- 107 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R ISTDEV+G L F+E Y+PSSPYSA+KA SD LV AW +YG+ Sbjct: 108 -KHDKRMHHISTDEVFGDLPLDSVEQFTETTAYDPSSPYSASKAGSDMLVRAWARSYGVA 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 LSNC+NNYGPY EKLIP IT ++ G LYG G+NVR+W +V+DH A++ ++ Sbjct: 167 ATLSNCANNYGPYQHVEKLIPRQITNVLIGDKPKLYGAGENVREWTHVDDHNDAVHRIIA 226 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE Y IG +ER N I+ +I L+ + + DRPGHD RY+ DS Sbjct: 227 DGRLGETYLIGSGDERSNKQIIEKILTLMG-------EPADAFEHVSDRPGHDLRYSNDS 279 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 +KI++E+GW P+ + ++GL T+ WY N WW P Sbjct: 280 TKIRTELGWQPRYADFDAGLAATIDWYKANTAWWEP 315 >gi|48474159|dbj|BAD22630.1| dTDP-glucose-4,6-dehydratase [Streptococcus oralis] Length = 348 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/351 (44%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVHVTVLDKLTYAGNRANIEEII-GDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AVLVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRYELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|332686304|ref|YP_004456078.1| dTDP-glucose 4,6-dehydratase [Melissococcus plutonius ATCC 35311] gi|332370313|dbj|BAK21269.1| dTDP-glucose 4,6-dehydratase [Melissococcus plutonius ATCC 35311] Length = 342 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/344 (43%), Positives = 207/344 (60%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +++ + ++ + DI D Sbjct: 4 IIVTGGAGFIGSNFVHYIVNNHPEVHVTVLDKLTYAGNKKNIENLP-TDRVELVVGDIAD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +K + DA+V++AAESH D S+ FI TNIIGT+ L+E R Sbjct: 63 SGLVDRLVK--KTDAVVHYAAESHNDNSLNDPFPFIQTNIIGTYTLIEACR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSL---------DKGL---FSEDMPYNPSSPYSATKASSDYLVL 169 K R+ +STDEVYG L +G+ F+ PYNPSSPYS+TKASSD LV Sbjct: 112 -KYDVRYHHVSTDEVYGDLPLREDLPEHGEGMGEKFTARTPYNPSSPYSSTKASSDLLVR 170 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ DH Sbjct: 171 AWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGIQPKLYGTGKNVRDWIHTNDH 230 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++++L KG+IGE Y IG + E N V E+ L +Y H + DR G Sbjct: 231 SSAVWMILTKGQIGETYLIGADGEEDN-KTVIELILELMGQPSNAYEH------VNDRVG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW P+ + G++ T+ WY++N WWR Sbjct: 284 HDLRYAIDSTKLREELGWQPKFTDFRQGMSDTIQWYVENEDWWR 327 >gi|218460818|ref|ZP_03500909.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli Kim 5] Length = 210 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 118/194 (60%), Positives = 149/194 (76%) Query: 141 DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPL 200 D+GLF E PY+PSSPYSA+KA+SD+L +AW TYG+PV++SNCSNNYGP+HFPEKLIPL Sbjct: 2 DEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPVVVSNCSNNYGPFHFPEKLIPL 61 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 I +E + +YG+G NVRDWLYVEDH RALY + +GR GE+YN+GG NER+NID+V Sbjct: 62 MILNALEDKPLPVYGNGANVRDWLYVEDHARALYTIASRGRPGEKYNVGGRNERRNIDVV 121 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 I +LD + H LI + DRPGHD RYAID++K++SE+GW QE E+G+ KT Sbjct: 122 HRICAILDGVYRDKAPHARLITNVTDRPGHDARYAIDATKLESELGWKAQETFETGIEKT 181 Query: 321 VCWYLDNNWWWRPL 334 V WYL+N WWWRPL Sbjct: 182 VHWYLENEWWWRPL 195 >gi|307700817|ref|ZP_07637842.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris FB024-16] gi|307613812|gb|EFN93056.1| dTDP-glucose 4,6-dehydratase [Mobiluncus mulieris FB024-16] Length = 330 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 147/338 (43%), Positives = 201/338 (59%), Gaps = 27/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ V + V VIDK+ YAGN S++ + + L + Sbjct: 1 MHVLVTGGAGFIGANFVHTTVEEHPDATVTVIDKIGYAGNPKSIEGLDRVKL---VVGST 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ + + +KE D +VNFAAESH D S++ FI +N++G F LE R Sbjct: 58 EDKDLMDALVKE--SDLVVNFAAESHNDNSLVDPSPFIYSNLVGMFNTLEACR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + R ISTDEVYG L D F D PY PSSPYSA+KA SD LV AW ++G Sbjct: 109 ---RHRVRLHHISTDEVYGDLALDDPHKFEPDSPYRPSSPYSASKAGSDMLVRAWIRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGPY EK IP IT ++G LYGDG NVRDW++V DH A++ + Sbjct: 166 IEATISNCSNNYGPYQHVEKFIPRMITNRMDGVRPRLYGDGLNVRDWIHVLDHNTAVWAI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KGR+GE Y IG N E+ N+ +V + ++ + + + ++DRPGHDRRYAI Sbjct: 226 INKGRLGETYLIGANGEKNNLQVVQALNKMM------GFPEDDFDQ-VKDRPGHDRRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D++K++ E GW P+ + E GL T+ WY N WWRP Sbjct: 279 DATKLREETGWEPKYTDFEEGLRHTIEWYQSNEAWWRP 316 >gi|300779954|ref|ZP_07089810.1| dTDP-glucose 4,6-dehydratase [Corynebacterium genitalium ATCC 33030] gi|300534064|gb|EFK55123.1| dTDP-glucose 4,6-dehydratase [Corynebacterium genitalium ATCC 33030] Length = 334 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 136/335 (40%), Positives = 204/335 (60%), Gaps = 28/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ R + + +++V+D LTYAGN +L + ++ + + ++ + D Sbjct: 8 MLVTGGAGFIGANFVRMVAQRQPETKIVVLDALTYAGNAENLAGLDEAAV-TLVEGRVED 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++ D +V+FAAESH D S+ F+ TNI+GT+ L+E R + + Sbjct: 67 AGVVDTLARD--ADVVVHFAAESHNDNSLRDPSPFVATNIMGTYTLVEAVRKYGT----- 119 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF +STDEV+G L D F+E PYNPSSPYSATKA SD+LV AW ++GI Sbjct: 120 -----RFHHVSTDEVFGDLALDDPAKFTESTPYNPSSPYSATKAGSDHLVRAWVRSFGID 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG G+ VRDW++V+DH A+ +L+ Sbjct: 175 ATISNCSNNYGPYQHIEKFIPRQITNLLSGRPAKLYGTGEQVRDWIHVDDHNDAVLAILE 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNIG + ER N++++ ++ L+ + H + DRPGHD RYA+D+ Sbjct: 235 RGKAGETYNIGASGERSNLEVI----TMICELMGGEFEH------VADRPGHDMRYAMDA 284 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +K+ E+ W P +M GL T+ WY + WW+ Sbjct: 285 TKLHDELAWQPHYTDMREGLANTIEWYRTHEAWWQ 319 >gi|48474181|dbj|BAD22651.1| dTDP-glucose-4,6-dehydratase [Streptococcus mitis] Length = 348 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 154/351 (43%), Positives = 203/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYKNFPDVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIYTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDNQDWWK 330 >gi|323481257|gb|ADX80696.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis 62] Length = 342 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 203/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DSELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|68643514|emb|CAI33750.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 349 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 155/351 (44%), Positives = 202/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++EI + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNFPDVYVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + E DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDKLAAE--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQTADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK+ E+GW P+ N E+GL T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLCDELGWKPEFTNFEAGLKATIKWYTDNQEWWK 330 >gi|319939394|ref|ZP_08013754.1| dTDP-glucose 4,6-dehydratase [Streptococcus anginosus 1_2_62CV] gi|319811380|gb|EFW07675.1| dTDP-glucose 4,6-dehydratase [Streptococcus anginosus 1_2_62CV] Length = 348 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/351 (43%), Positives = 204/351 (58%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS Y+ N+ + + V+DKLTYAGN +++EI + + DI D Sbjct: 7 IVVTGGAGFIGSNFVHYVYNNFPDVHITVLDKLTYAGNRANIEEI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + K DAIV++AAESH D S+ FI TN +GT+ LLE R Sbjct: 66 AAIVDQVAK--NADAIVHYAAESHNDNSLNDPRPFIDTNFVGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTPETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGKIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E+GL +T+ WY D+ WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKETIKWYTDHQDWWK 330 >gi|315604893|ref|ZP_07879951.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313432|gb|EFU61491.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 180 str. F0310] Length = 335 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 158/346 (45%), Positives = 209/346 (60%), Gaps = 26/346 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQV 57 M+++VTGGAGFIG+ L+ D + V+V+DK TYAGN SL +I Q+ S ++ Sbjct: 1 MKIVVTGGAGFIGANFVHTLLEDHPDVDVVVLDKFTYAGNRASLTDIPADQAARLSVVEG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + + DA+V+FAAESH D S+L FI TN++GTF LLE R Sbjct: 61 DVADADLVDGVVG--GADAVVHFAAESHNDNSLLDPSPFIQTNLVGTFTLLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + RF ISTDEVYG L D F+ PYNPSSPYS++KA SD LV AW + Sbjct: 114 -----RHKVRFHHISTDEVYGDLELDDPAKFTPTTPYNPSSPYSSSKAGSDLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ +SNCSNNYGPY EK IP IT + G LYGDG NVRDW++V DH A++ Sbjct: 169 FGVEATISNCSNNYGPYQHIEKFIPRMITNRLRGVRPRLYGDGLNVRDWIHVRDHNTAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L +GRIGE Y IG N E N D+V + L+ + H + DRPGHD RY Sbjct: 229 EILMRGRIGETYLIGANGETNNRDVVAILNELM-GYPADDFDH------VTDRPGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 AID+SK+ +E+GW P+ N GL T+ WY DN WW PL + ++ Sbjct: 282 AIDNSKLVTELGWEPRFTNFRDGLADTIAWYTDNEAWWAPLKEAVE 327 >gi|257357704|dbj|BAI23330.1| putative 4,6-dehydratase [Streptomyces griseus] Length = 321 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 141/337 (41%), Positives = 203/337 (60%), Gaps = 26/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSA R LV+ V V+D LTYAGN +L + F+F+ Sbjct: 1 MRVLVTGGAGFIGSAYVRELVSGGSPARQNAHVTVLDLLTYAGNRANLAPVD--GRFTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI DR + + D +V+FAAESHVDRSI GA +F+ TN++G +L+ Sbjct: 59 HGDIGDRTLLERVVPGH--DMVVSFAAESHVDRSIAGAADFMRTNVLGV------QKLFD 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +CL + R + +STDEVYGS+ G + E P P+SPY+A+KA SD L ++ T+ Sbjct: 111 ACLEAGVE---RVVHVSTDEVYGSIGSGSWDETAPLAPNSPYAASKAGSDLLARSYHVTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+++ C NNYGPY PEK IP +TR++ G V LYGDG NVRDW++V DH + + Sbjct: 168 GLPVVITRCGNNYGPYQHPEKAIPRFVTRLLSGGTVPLYGDGGNVRDWIHVTDHCHGIQV 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++G GE Y++ G +E N++ L D L+ + + + + DRPGHDRRY+ Sbjct: 228 AAERGTAGEVYHVAGTHELTNVE-------LTDRLLTACGAGWDRVEKVPDRPGHDRRYS 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + K+++ +G+ P+ E GL TV WY N WW+ Sbjct: 281 LTDKKLRA-LGYAPRVPFEEGLRDTVRWYAANAAWWQ 316 >gi|293189421|ref|ZP_06608141.1| dTDP-glucose 4,6-dehydratase [Actinomyces odontolyticus F0309] gi|292821511|gb|EFF80450.1| dTDP-glucose 4,6-dehydratase [Actinomyces odontolyticus F0309] Length = 335 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 157/346 (45%), Positives = 209/346 (60%), Gaps = 26/346 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQV 57 M+++VTGGAGFIG+ L+ D + V+V+DK TYAGN SL ++ + + ++ Sbjct: 1 MKIVVTGGAGFIGANFVHTLLEDHPDVDVVVLDKFTYAGNRASLTDVPAELAARLTVVEG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + + DA+V+FAAESH D S+L FI TN++GTF LLE R Sbjct: 61 DIADADLVDGVVA--GADAVVHFAAESHNDNSLLDPSPFIQTNLVGTFTLLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + RF ISTDEVYG L D F+ PYNPSSPYS++KA SD LV AW + Sbjct: 114 -----RHKVRFHHISTDEVYGDLELDDPAKFTPTTPYNPSSPYSSSKAGSDLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ +SNCSNNYGPY EK IP IT + G LYGDG NVRDW++V DH A++ Sbjct: 169 FGVEATISNCSNNYGPYQHIEKFIPRMITNRLRGVRPRLYGDGLNVRDWIHVRDHNTAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L KGRIGE Y IG + E N D+V + L+ P + H + DRPGHD RY Sbjct: 229 DILMKGRIGETYLIGADGETNNRDVVAILNELM-GYAPDDFDH------VTDRPGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 AID+SK+ +E+GW PQ N GL T+ WY +N WW PL + ++ Sbjct: 282 AIDNSKLVTELGWEPQFTNFRDGLADTIAWYTENEAWWAPLKEAVE 327 >gi|77407805|ref|ZP_00784558.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae COH1] gi|77411728|ref|ZP_00788066.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae CJB111] gi|77162236|gb|EAO73209.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae CJB111] gi|77173552|gb|EAO76668.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae COH1] Length = 348 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 330 >gi|81429104|ref|YP_396104.1| putative dTDP-glucose 4,6-dehydratase [Lactobacillus sakei subsp. sakei 23K] gi|78610746|emb|CAI55797.1| Putative dTDP-glucose 4,6-dehydratase [Lactobacillus sakei subsp. sakei 23K] Length = 334 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 203/335 (60%), Gaps = 25/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS RY+V ++ V V+DKLTYAGN +L + + + + DICD Sbjct: 5 ILVTGGAGFIGSNFVRYVVRQQPEVHVTVLDKLTYAGNRANLAGLPAERV-TLVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ +++ DA+V++AAESH D S+ FI TNI+G++ L+E R + Sbjct: 64 APLVQQLVQKV--DAVVHYAAESHNDNSLQDPTPFIQTNIMGSYTLIEACRQY------- 114 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R+ +ST EVYG L F+ + YNPSSPYSA+KASSD LV AW ++G+ Sbjct: 115 ---HVRYHHVSTGEVYGDLPLVGDAKFTPETRYNPSSPYSASKASSDLLVRAWVRSFGLR 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNCSNNYGPY EK IP IT ++ G LYG GQN+RDW++ +DH A++ +L Sbjct: 172 ATISNCSNNYGPYQHIEKFIPRQITNILSGRRPKLYGTGQNIRDWIHTDDHSSAVWTILT 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +GRIGE Y IG + +R N V E+ L +Y ++DRPG D RYAID+ Sbjct: 232 RGRIGETYLIGADGQRTN-QAVLEMILTLMGQPKDAYDQ------VQDRPGRDLRYAIDA 284 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +K++ E+GW PQ + + GL +T+ WY + WW+ Sbjct: 285 TKLREELGWQPQLTDFKVGLQQTIDWYRHHEEWWQ 319 >gi|315166502|gb|EFU10519.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1341] Length = 342 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 203/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWKPEFTNFREGLAETIKWYTENEDWWR 327 >gi|257087324|ref|ZP_05581685.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis D6] gi|257090458|ref|ZP_05584819.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis CH188] gi|312901448|ref|ZP_07760723.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0470] gi|312903794|ref|ZP_07762967.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0635] gi|256995354|gb|EEU82656.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis D6] gi|256999270|gb|EEU85790.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis CH188] gi|310632868|gb|EFQ16151.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0635] gi|311291437|gb|EFQ69993.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0470] gi|315025874|gb|EFT37806.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX2137] gi|315578165|gb|EFU90356.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0630] Length = 342 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 205/345 (59%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N ++ I L+ I +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDNKTVMELILELMGQPI-DAYEH------VNDRA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|29376700|ref|NP_815854.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis V583] gi|227520247|ref|ZP_03950296.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0104] gi|227555320|ref|ZP_03985367.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis HH22] gi|229545294|ref|ZP_04434019.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1322] gi|255975344|ref|ZP_05425930.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T2] gi|256617234|ref|ZP_05474080.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis ATCC 4200] gi|256762994|ref|ZP_05503574.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T3] gi|256853642|ref|ZP_05559007.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T8] gi|256961443|ref|ZP_05565614.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis Merz96] gi|256963467|ref|ZP_05567638.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis HIP11704] gi|257084730|ref|ZP_05579091.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis Fly1] gi|257416505|ref|ZP_05593499.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis AR01/DG] gi|257419746|ref|ZP_05596740.1| dTDP-glucose-4,6-dehydratase [Enterococcus faecalis T11] gi|257422094|ref|ZP_05599084.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis X98] gi|293382819|ref|ZP_06628740.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis R712] gi|293387972|ref|ZP_06632505.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis S613] gi|300860640|ref|ZP_07106727.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TUSoD Ef11] gi|307272374|ref|ZP_07553630.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0855] gi|307277278|ref|ZP_07558382.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX2134] gi|307281878|ref|ZP_07562093.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0860] gi|307286605|ref|ZP_07566697.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0109] gi|307292431|ref|ZP_07572287.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0411] gi|312905902|ref|ZP_07764916.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DAPTO 512] gi|312908950|ref|ZP_07767813.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DAPTO 516] gi|29344164|gb|AAO81924.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis V583] gi|227072326|gb|EEI10289.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0104] gi|227175531|gb|EEI56503.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis HH22] gi|229309644|gb|EEN75631.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1322] gi|255968216|gb|EET98838.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T2] gi|256596761|gb|EEU15937.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis ATCC 4200] gi|256684245|gb|EEU23940.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T3] gi|256710585|gb|EEU25628.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T8] gi|256951939|gb|EEU68571.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis Merz96] gi|256953963|gb|EEU70595.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis HIP11704] gi|256992760|gb|EEU80062.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis Fly1] gi|257158333|gb|EEU88293.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis ARO1/DG] gi|257161574|gb|EEU91534.1| dTDP-glucose-4,6-dehydratase [Enterococcus faecalis T11] gi|257163918|gb|EEU93878.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis X98] gi|291079810|gb|EFE17174.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis R712] gi|291082628|gb|EFE19591.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis S613] gi|295113356|emb|CBL31993.1| dTDP-glucose 4,6-dehydratase [Enterococcus sp. 7L76] gi|300849679|gb|EFK77429.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TUSoD Ef11] gi|306496560|gb|EFM66121.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0411] gi|306502316|gb|EFM71597.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0109] gi|306503832|gb|EFM73054.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0860] gi|306506208|gb|EFM75374.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX2134] gi|306510928|gb|EFM79942.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0855] gi|310628069|gb|EFQ11352.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DAPTO 512] gi|311290734|gb|EFQ69290.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DAPTO 516] gi|315028189|gb|EFT40121.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX4000] gi|315033453|gb|EFT45385.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0017] gi|315146139|gb|EFT90155.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX2141] gi|315149174|gb|EFT93190.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0012] gi|315157128|gb|EFU01145.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0043] gi|315161849|gb|EFU05866.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0645] gi|315164321|gb|EFU08338.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1302] gi|315171508|gb|EFU15525.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1342] gi|315173061|gb|EFU17078.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1346] gi|315575179|gb|EFU87370.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0309B] gi|315582606|gb|EFU94797.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0309A] Length = 342 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 203/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|229819685|ref|YP_002881211.1| dTDP-glucose 4,6-dehydratase [Beutenbergia cavernae DSM 12333] gi|229565598|gb|ACQ79449.1| dTDP-glucose 4,6-dehydratase [Beutenbergia cavernae DSM 12333] Length = 331 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 144/338 (42%), Positives = 200/338 (59%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIG+ R + D V V+D TYAGN SL ++ + ++ D+ Sbjct: 1 MHVLVTGGAGFIGTNFVRSTLEDRPDADVTVLDAFTYAGNAASLDDLGER--VRVVRGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + D +V+FAAESH D S+ F+ TN++GT+ LLE R Sbjct: 59 ADAEVVEPLVA--ASDVVVHFAAESHNDNSLADPWPFVRTNVVGTYTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ +STDEVYG L D F+E PYNPSSPYS+TKASSD LV AW ++G Sbjct: 110 ---RHDVRYHHVSTDEVYGDLELDDVERFTEATPYNPSSPYSSTKASSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG+G+NVRDW++V DH A++ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVIDGVRPRLYGEGRNVRDWIHVRDHNDAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GR+GE Y IG + E N +V E+ P +Y + DR GHD RYAI Sbjct: 227 IDGGRLGETYLIGADGELDNRRVV-ELVLTEMGSDPTAYD------LVTDRAGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 D+ K+++E+GW P+ + +GL T+ WY ++ WWRP Sbjct: 280 DAHKLRTELGWSPRFGDFRAGLADTIAWYREHEDWWRP 317 >gi|19745997|ref|NP_607133.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS8232] gi|21910184|ref|NP_664452.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS315] gi|28896116|ref|NP_802466.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes SSI-1] gi|50914108|ref|YP_060080.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS10394] gi|56807812|ref|ZP_00365659.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Streptococcus pyogenes M49 591] gi|94990304|ref|YP_598404.1| dTDP-glucose 4,6-dehydratase [Streptococcus phage 10270.2] gi|94994226|ref|YP_602324.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS10750] gi|139473905|ref|YP_001128621.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes str. Manfredo] gi|209559282|ref|YP_002285754.1| dTDP-glucose 4,6-dehydratase [Streptococcus phage NZ131.2] gi|306827471|ref|ZP_07460755.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes ATCC 10782] gi|19748160|gb|AAL97632.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus pyogenes MGAS8232] gi|21904377|gb|AAM79255.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus pyogenes MGAS315] gi|28811366|dbj|BAC64299.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus pyogenes SSI-1] gi|50903182|gb|AAT86897.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS10394] gi|94543812|gb|ABF33860.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS10270] gi|94547734|gb|ABF37780.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS10750] gi|134272152|emb|CAM30397.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus pyogenes str. Manfredo] gi|209540483|gb|ACI61059.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes NZ131] gi|304430351|gb|EFM33376.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes ATCC 10782] Length = 346 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|25011320|ref|NP_735715.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae NEM316] gi|76798344|ref|ZP_00780588.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 18RS21] gi|23095744|emb|CAD46930.1| Unknown [Streptococcus agalactiae NEM316] gi|76586295|gb|EAO62809.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 18RS21] Length = 348 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPYVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 330 >gi|227513959|ref|ZP_03944008.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] gi|227087670|gb|EEI22982.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] Length = 310 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 200/322 (62%), Gaps = 18/322 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS RY ++ +V+ +D LTYAGNL ++ +++ + + F+Q DI Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPADRVVNLDCLTYAGNLANVADLASNPRYHFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L Q D +VNFAAESHVDRSI F++TN++G +LL+ R Sbjct: 61 RDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R +Q+STDEVYGS+ G E+ P PSSPY+ATKAS+D L +A HT+G V Sbjct: 114 ---RARVRLVQVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +NNYGP PEKL+P+ IT + + + G G ++RDWLYV D+ +A+ LV++K Sbjct: 171 VITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGTGDDIRDWLYVVDNCQAIDLVMRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG R +++V + LL P S + + +R GHD RYA+D + Sbjct: 231 GVAGEVYNIGGFERRTVLEVVASLQALLG--FPASQ-----VVHVAERLGHDHRYAVDDT 283 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 K++ +GW P ++ +GL KTV Sbjct: 284 KLRRALGWRPSTSLAAGLTKTV 305 >gi|71903381|ref|YP_280184.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS6180] gi|71802476|gb|AAX71829.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS6180] Length = 346 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KTDAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|15674955|ref|NP_269129.1| dTDP-glucose 4,6-dehydratase [Streptococcus phage 370.3] gi|13622100|gb|AAK33850.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus pyogenes M1 GAS] Length = 346 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KTDAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|170290459|ref|YP_001737275.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174539|gb|ACB07592.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] Length = 331 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 141/336 (41%), Positives = 206/336 (61%), Gaps = 18/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGGAGF+GS L R++ +++V DKL+Y+G + +++++ + F++ DIC Sbjct: 1 MKLLITGGAGFMGSNLVRFIAETTDFEIMVYDKLSYSGRIENIEDLIERKRIRFVRGDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S ++EF+PDAIVN AAE+HVDRSI FI TNI G + +LE R Sbjct: 61 DEEMLTSVIEEFRPDAIVNLAAETHVDRSINEPSPFIQTNIFGVYTILEVMR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++D L +STDEVYG L + G+ + E NPSSPYS +KA+ D L+ A+ TYG+ Sbjct: 113 -RRDIPLLLHLSTDEVYGDLSELGIEADESSNLNPSSPYSGSKAAGDLLIKAYSRTYGLK 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ NNYGPY PEKLIP I R+++G +YGDG RDW++ D+ RAL +L Sbjct: 172 YKIARPCNNYGPYQHPEKLIPRTIIRLLQGKPATIYGDGSQERDWIHALDNARALLTILT 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G E YNI R N V I L+ ++ K I +++ RPG D RYA+ Sbjct: 232 EGLSNEIYNIC----RHNYASVRTIVELITKIMGKDPRRD--IIYVKGRPGEDLRYAMKC 285 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+ + +GW P ++E+GL T+ WYL+N WWW+PL Sbjct: 286 DKLLN-LGWRPIYDLETGLRDTLEWYLNNEWWWKPL 320 >gi|229549529|ref|ZP_04438254.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis ATCC 29200] gi|255972232|ref|ZP_05422818.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T1] gi|256956579|ref|ZP_05560750.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DS5] gi|257079505|ref|ZP_05573866.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis JH1] gi|294779044|ref|ZP_06744457.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis PC1.1] gi|307270366|ref|ZP_07551671.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX4248] gi|312953334|ref|ZP_07772176.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0102] gi|229305347|gb|EEN71343.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis ATCC 29200] gi|255963250|gb|EET95726.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis T1] gi|256947075|gb|EEU63707.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis DS5] gi|256987535|gb|EEU74837.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis JH1] gi|294453874|gb|EFG22263.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis PC1.1] gi|306513274|gb|EFM81901.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX4248] gi|310628722|gb|EFQ12005.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0102] gi|315035721|gb|EFT47653.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0027] gi|315146324|gb|EFT90340.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX4244] gi|315154454|gb|EFT98470.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0031] gi|315160176|gb|EFU04193.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX0312] gi|327535585|gb|AEA94419.1| dTDP glucose 4,6-dehydratase [Enterococcus faecalis OG1RF] Length = 342 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 203/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRV 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|322411999|gb|EFY02907.1| dTDP-glucose-4,6-dehydratase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 347 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 200/344 (58%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ ++ V V+DKLTYAGN +++EI + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPEVHVTVLDKLTYAGNRANIEEI-LGDRVELVVGDIVD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R + Sbjct: 64 AELVNELAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARHY------- 114 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF +STDEVYG L F+ D YNPSSPYS+TKA+SD +V Sbjct: 115 ---NIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTADTNYNPSSPYSSTKAASDLIVK 171 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 172 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 231 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KG+IGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 232 STGVWAILTKGQIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRAG 284 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDS+K++ E+GW PQ N GL T+ WY D+ WW+ Sbjct: 285 HDLRYAIDSTKLREELGWEPQFTNFSEGLEDTIKWYTDHEDWWK 328 >gi|154509517|ref|ZP_02045159.1| hypothetical protein ACTODO_02049 [Actinomyces odontolyticus ATCC 17982] gi|153799151|gb|EDN81571.1| hypothetical protein ACTODO_02049 [Actinomyces odontolyticus ATCC 17982] Length = 335 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 157/346 (45%), Positives = 209/346 (60%), Gaps = 26/346 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQV 57 M+++VTGGAGFIG+ L+ D + V+V+DK TYAGN SL ++ + + ++ Sbjct: 1 MKIVVTGGAGFIGANFVHTLLEDHPDVDVVVLDKFTYAGNRASLTDMPAELAARLTVVEG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + + DA+V+FAAESH D S+L FI TN++GTF LLE R Sbjct: 61 DIADADLVDGVVA--GADAVVHFAAESHNDNSLLDPSPFIQTNLVGTFTLLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + RF ISTDEVYG L D F+ PYNPSSPYS++KA SD LV AW + Sbjct: 114 -----RHKVRFHHISTDEVYGDLELDDPAKFTPTTPYNPSSPYSSSKAGSDLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ +SNCSNNYGPY EK IP IT + G LYGDG NVRDW++V DH A++ Sbjct: 169 FGVEATISNCSNNYGPYQHIEKFIPRMITNRLRGVRPRLYGDGLNVRDWIHVRDHNTAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L KGRIGE Y IG + E N D+V + L+ P + H + DRPGHD RY Sbjct: 229 DILMKGRIGETYLIGADGETNNRDVVAILNELM-GYAPDDFDH------VTDRPGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 AID+SK+ +E+GW PQ N GL T+ WY +N WW PL + ++ Sbjct: 282 AIDNSKLVTELGWEPQFTNFRDGLADTIAWYTENEAWWAPLKEAVE 327 >gi|327382987|gb|AEA54463.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei LC2W] gi|327386175|gb|AEA57649.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei BD-II] Length = 341 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 208/349 (59%), Gaps = 40/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + ++Q++V+DKLTYAGN ++ ++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYRHHPEVQMIVLDKLTYAGNKANIADL-LGDRVQLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + + D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 60 ADKAVVDKWMAKV--DTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 111 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 164 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ LYG G+NVRDW+ Sbjct: 165 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSRIKPKLYGTGKNVRDWI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + DH A++ +L KG+IGE Y IG N E+ N V E L+ L+ K T+ + Sbjct: 225 HTNDHSSAIWDILTKGKIGETYLIGANGEKDN-KTVLE---LILKLMGKP---TDYYDQV 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 +DRPGHD RYAID+SK + E+GW PQ + E GL T+ WY ++ WW+ Sbjct: 278 KDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIEWYTEHRDWWQ 326 >gi|146321160|ref|YP_001200870.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 98HAH33] gi|145691966|gb|ABP92471.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 98HAH33] gi|292558605|gb|ADE31606.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis GZ1] Length = 397 Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+ I + + DI D Sbjct: 56 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIAD 114 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 115 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 163 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 164 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDL 219 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 220 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 279 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGR+GE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 280 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 332 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW PQ + GL +T+ WY DN WW+ Sbjct: 333 RAGHDLRYAIDASKLRDELGWTPQFTDFSQGLEETIQWYTDNQDWWK 379 >gi|223933260|ref|ZP_03625250.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 89/1591] gi|253752021|ref|YP_003025162.1| dTDP-glucose-4,6-dehydratase [Streptococcus suis SC84] gi|253753846|ref|YP_003026987.1| dTDP-glucose-4,6-dehydratase [Streptococcus suis P1/7] gi|253755278|ref|YP_003028418.1| dTDP-glucose-4,6-dehydratase [Streptococcus suis BM407] gi|330832508|ref|YP_004401333.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis ST3] gi|23504819|emb|CAD49092.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis] gi|223898074|gb|EEF64445.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 89/1591] gi|251816310|emb|CAZ51939.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus suis SC84] gi|251817742|emb|CAZ55493.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus suis BM407] gi|251820092|emb|CAR46369.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus suis P1/7] gi|319758388|gb|ADV70330.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis JS14] gi|329306731|gb|AEB81147.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis ST3] Length = 348 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGR+GE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW PQ + GL +T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWTPQFTDFSQGLEETIQWYTDNQDWWK 330 >gi|18655655|pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound gi|18655656|pdb|1KEP|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound gi|18655657|pdb|1KER|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-D-Glucose Bound gi|18655658|pdb|1KER|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-D-Glucose Bound gi|18655659|pdb|1KET|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Thymidine Diphosphate Bound gi|18655660|pdb|1KET|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Thymidine Diphosphate Bound gi|37927119|pdb|1OC2|A Chain A, The Structure Of Nadh In The Dtdp-D-Glucose Dehydratase (Rmlb) Enzyme gi|37927120|pdb|1OC2|B Chain B, The Structure Of Nadh In The Dtdp-D-Glucose Dehydratase (Rmlb) Enzyme Length = 348 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGR+GE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW PQ + GL +T+ WY DN WW+ Sbjct: 284 RAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWK 330 >gi|223954222|gb|ACN29712.1| dTDP-glucose 4,6-dehydratase [Nonomuraea longicatena] Length = 309 Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 145/330 (43%), Positives = 200/330 (60%), Gaps = 26/330 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS R L +V V+DKLTYAGN +L + + F+ DICD Sbjct: 3 KILVTGGAGFIGSHFARGLGG---AEVTVLDKLTYAGNRANLDGVPHA----FVHGDICD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R L D +VNFAAESHVDR I GA EF+ TN++GT LL+ CL Sbjct: 56 AGLLREVLPGH--DLVVNFAAESHVDRLIEGAAEFVRTNVLGTQTLLQ------GCLEAG 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + +Q+STDEVYGS+ G ++E P P SPY+A KA D + A+ T+G+ V + Sbjct: 108 VR---KVVQVSTDEVYGSIGVGSWTESAPLRPRSPYAAAKAGGDLVAQAYAITHGLDVSI 164 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + C NNYGP +PEK+IPL +TR++ G V LYGDG NVRDW++V DH + LV + G Sbjct: 165 TRCGNNYGPRQYPEKIIPLFVTRLLRGERVPLYGDGGNVRDWVHVADHCAGIRLVAEVGL 224 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE Y+I G E N ++V G LL A S + + ++EDR GHDRRY++D ++ Sbjct: 225 PGEVYHIAGTAEMTNKELV---GHLLAA----SDADWGRVEYVEDRKGHDRRYSLDDRRL 277 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++ +G+ P+ + GL TV WY N WW Sbjct: 278 RA-LGYRPEVEFDQGLRDTVRWYAANPGWW 306 >gi|22537356|ref|NP_688207.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 2603V/R] gi|22534228|gb|AAN00080.1|AE014246_15 dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 2603V/R] Length = 348 Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETINWYTENQDWWK 330 >gi|94988425|ref|YP_596526.1| dTDP-glucose 4,6-dehydratase [Streptococcus phage 9429.2] gi|94992308|ref|YP_600407.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS2096] gi|94541933|gb|ABF31982.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS9429] gi|94545816|gb|ABF35863.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS2096] Length = 346 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KTDAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSIGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|145594754|ref|YP_001159051.1| dTDP-glucose 4,6-dehydratase [Salinispora tropica CNB-440] gi|145304091|gb|ABP54673.1| dTDP-glucose 4,6-dehydratase [Salinispora tropica CNB-440] Length = 335 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 206/336 (61%), Gaps = 25/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGF+GS R L++ ++ V+D LTYAG +L + +F+ Sbjct: 1 MRILVTGGAGFVGSQYVRTLLDGAYQGYENAEITVLDLLTYAGRRTNLPVADRR--LTFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DI DR + L A+V+FAAESHVDRS+ A F TTN++GT LLE R Sbjct: 59 QGDIGDRGLLLDLLPGHD--AVVHFAAESHVDRSLEDASPFTTTNVLGTQTLLECCR--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R +Q+STDEVYG++ +G +SE+ P P+SPY+A+KA++D L A+ +Y Sbjct: 114 ------RLGIGRIVQVSTDEVYGTIAEGSWSEEHPLLPNSPYAASKAAADLLARAYHRSY 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV+++ C+NNYGPY EK+IP +T ++ V LYGDG NVR+WL+V DH R + L Sbjct: 168 GLPVVVTRCTNNYGPYQHVEKVIPRFVTNLLTDQPVPLYGDGLNVREWLHVADHCRGVQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+KGR GE Y+ GG E N E+ LL L S+ + +R + DR GHDRRY Sbjct: 228 ALEKGREGEIYHFGGGVELTN----RELTALLVELCGASW---DAVRLVTDRKGHDRRYC 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D K + E+G+ PQ + ESGL TV WY DN WW Sbjct: 281 LDDGKARRELGYAPQVSFESGLAATVSWYQDNRAWW 316 >gi|257082115|ref|ZP_05576476.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis E1Sol] gi|256990145|gb|EEU77447.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis E1Sol] Length = 342 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 202/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS+ ++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTGLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|325067613|ref|ZP_08126286.1| dTDP-glucose 4,6-dehydratase [Actinomyces oris K20] Length = 331 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 159/344 (46%), Positives = 209/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIG+ + LV V V+DKLTYAGN SL ++ + + + DI Sbjct: 1 MHVLITGGAGFIGANFVHQTLVRHPDATVTVLDKLTYAGNKGSLADLD--DRVTLVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + Q D +V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 59 ADADVVDPLVA--QADVVVHFAAESHNDNSLRDPSPFIQTNLVGTFTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF ISTDEVYG L D F PYNPSSPYS++KA SD LV AW ++G Sbjct: 110 ---RHKVRFHHISTDEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V DH A++ + Sbjct: 167 VEATISNCSNNYGPYQHIEKFIPRQITNLIDGVRPKLYGAGENVRDWIHVLDHNDAVWDI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG N E+ N ++V E+ L P Y H + DRPGHD RYAI Sbjct: 227 IEKGRIGETYLIGANGEKNNKEVV-ELILELMGHAPDDYEH------VADRPGHDMRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E+GW P+ + SGL T+ WY DN WWRPL E++ Sbjct: 280 DNSKLVQELGWAPRFTDFRSGLQATIDWYRDNEAWWRPLKAEVE 323 >gi|309784500|ref|ZP_07679138.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] gi|308927606|gb|EFP73075.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] Length = 215 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 125/211 (59%), Positives = 156/211 (73%), Gaps = 4/211 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGSAL RY++N+ V+V+DKLTYAGNL SL ++QS F+F +VDICD Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + E QPD +++ AAESHVDRSI G FI TNI+GT+ LLE R +W+ L++D Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122 Query: 122 KKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK FRF ISTDEVYG L F+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 L++NCSNNYGPYHFPEKLIPL ++ G H Sbjct: 183 LITNCSNNYGPYHFPEKLIPLMT--VLRGDH 211 >gi|171184952|ref|YP_001793871.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934164|gb|ACB39425.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] Length = 320 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 143/338 (42%), Positives = 199/338 (58%), Gaps = 28/338 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAGF+GS R++ + +VLV DKLTYAG L +L+ + F++ D+ Sbjct: 1 MRVVVIGGAGFMGSNFVRHVAG--RGEVLVYDKLTYAGRLENLRGVE----VEFVRGDVA 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + L F+PD +VNFAAE+HVDRSI F+TTN+ G + +LE R Sbjct: 55 NFELLFYVLSRFRPDVVVNFAAETHVDRSINDPAPFLTTNVWGVYSVLEAAR-------- 106 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F ++ ISTDEVYG L G E P PSSPYSA+KA+ D LV A+G TYG+ Sbjct: 107 --RLGFLYVHISTDEVYGDLAGGGEADESWPMRPSSPYSASKAAGDLLVQAYGRTYGVRF 164 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + NNYGP+ PEKLIP I R++ G +YGDG+ VRDWLYV D VRAL +V+++ Sbjct: 165 RIVRPCNNYGPFQHPEKLIPRTIVRLLLGRPATIYGDGRQVRDWLYVGDFVRALEVVIER 224 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YN+ ++V I L ++++ RPG D RYA+ Sbjct: 225 GVDGGIYNVCAGQPASVREVVERIASALGG----------SVKYVRGRPGEDMRYAMRCD 274 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 +++ +GW P+ ++E GL +TV WY +N WWWRPL E Sbjct: 275 RLRG-LGWRPEVSLEEGLRRTVEWYRENEWWWRPLLDE 311 >gi|41033611|emb|CAF18472.1| dTDP-D-glucose-4,6-dehydratase [Thermoproteus tenax] Length = 320 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/338 (42%), Positives = 198/338 (58%), Gaps = 28/338 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ V GGAGF+GS R++ + +VLV DKLTYAG L +L+ + F++ D+ Sbjct: 1 MRVAVIGGAGFMGSNFVRHMAG--RGEVLVYDKLTYAGRLENLRGVE----VEFVRGDVA 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + L F+PD +VNFAAE+HVDRSI F+TTN+ G +LE R Sbjct: 55 NFELLFYVLSRFRPDVVVNFAAETHVDRSINDPAPFLTTNVWGVHSVLEAAR-------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F ++ ISTDEVYG L G + E P PSSPYSA+KA+ D LV A+G TYG+ Sbjct: 107 --KLGFLYVHISTDEVYGDLASGGEADESWPMRPSSPYSASKAAGDLLVQAYGRTYGVRF 164 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + NNYGP+ PEKLIP I R++ G +YGDG+ VRDWLYV D VRAL +V+++ Sbjct: 165 RIVRPCNNYGPFQHPEKLIPRTIVRLLLGRPATIYGDGRQVRDWLYVGDFVRALEVVIER 224 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YN+ ++V I L ++++ RPG D RYA+ Sbjct: 225 GVDGGIYNVCAGQPASVREVVERIASALGG----------SVKYVRGRPGEDMRYAMRCD 274 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K++ +GW P+ ++E GL +TV WY +N WWWRPL E Sbjct: 275 KLRG-LGWRPEVSLEEGLRRTVEWYRENEWWWRPLLDE 311 >gi|229815503|ref|ZP_04445832.1| hypothetical protein COLINT_02552 [Collinsella intestinalis DSM 13280] gi|229808894|gb|EEP44667.1| hypothetical protein COLINT_02552 [Collinsella intestinalis DSM 13280] Length = 312 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/325 (44%), Positives = 201/325 (61%), Gaps = 27/325 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGG GFIGS ++V + + V V+DKLTYAGN +++ + S+ + DIC Sbjct: 9 RIVVTGGCGFIGSNFVHHVVREHPGVHVTVLDKLTYAGNPDNIAGLP-SDRVELVVGDIC 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + DA+V++AAESH D SI F+ TN+ GT+ L+E R Sbjct: 68 DAVLVDRLVS--GTDAVVHYAAESHNDNSIADPSPFLRTNVEGTYTLIEACR-------- 117 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R+ +STDEVYG L D F+E+ PY PSSPYS+TKASSD LV AW T+G+ Sbjct: 118 --RHGVRYHHVSTDEVYGDLALDDPARFTEETPYRPSSPYSSTKASSDLLVRAWARTFGL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP +T +I+G LYGDG+NVRDW++ EDH A++ +L Sbjct: 176 RATISNCSNNYGPYQHVEKFIPRQVTNLIDGVRPKLYGDGRNVRDWIHTEDHSSAVWCIL 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAI 296 KGRIGE Y IG + E NI ++ E I K++ E ++ DRPGHDRRYAI Sbjct: 236 TKGRIGETYLIGADGELDNITVLRE--------ILKAFGRPEDDFDWVRDRPGHDRRYAI 287 Query: 297 DSSKIKSEIGWFP-QENMESGLNKT 320 D++K++ E+GW P + + +GL +T Sbjct: 288 DATKLRRELGWEPARTDFAAGLAET 312 >gi|159037959|ref|YP_001537212.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] gi|157916794|gb|ABV98221.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] Length = 324 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/347 (41%), Positives = 206/347 (59%), Gaps = 35/347 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-----QVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSA R L++ + QV V+D TYAG SL + + Sbjct: 1 MRILVTGGAGFIGSAYVRRLLSGSEPALRPDQVTVLDSFTYAGTDGSLGPVRDDPRLRVV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D + + + + DAIV+FAAESHVDRSI A F++TN+ GT +LL+ Sbjct: 61 RGDVRDEDLVDATVAGH--DAIVHFAAESHVDRSIASAAPFVSTNVGGTQVLLDAAL--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RFL +STDEVYGS+ +G P NPSSPYSATKA++D L LA+ T+ Sbjct: 116 ------RHRTGRFLHVSTDEVYGSISQGTSPPSAPLNPSSPYSATKAAADLLALAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ +NNYGPY PEKLIP +T + EG + LYGDG ++RDWL+V+DH + L Sbjct: 170 GLDVVITRGANNYGPYQHPEKLIPRFVTNLFEGHTLPLYGDGGDIRDWLHVDDHCHGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDI------VFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + GR G Y++GG N D+ +F++G+ D + P + DR G Sbjct: 230 AQRNGRAGAIYHLGGGTALTNRDLTAALLDLFDVGW--DRVTP-----------VTDRKG 276 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 HDRRYA+D++ + ++GW P ++ GL TV WY ++ WW PL K Sbjct: 277 HDRRYALDTTATRRDLGWAPAVALDRGLTATVRWYREHRAWWEPLVK 323 >gi|326772089|ref|ZP_08231374.1| dTDP-glucose 4,6-dehydratase [Actinomyces viscosus C505] gi|326638222|gb|EGE39123.1| dTDP-glucose 4,6-dehydratase [Actinomyces viscosus C505] Length = 346 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 159/344 (46%), Positives = 208/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIG+ + LV V V+DKLTYAGN SL ++ + + DI Sbjct: 16 MHVLITGGAGFIGANFVHQTLVRHPDATVTVLDKLTYAGNKGSLADLG--GRVTLVVGDI 73 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + Q D +V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 74 ADADVVDPLVA--QADVVVHFAAESHNDNSLRDPSPFIQTNLVGTFTLLEAVR------- 124 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF ISTDEVYG L D F PYNPSSPYS++KA SD LV AW ++G Sbjct: 125 ---RHKVRFHHISTDEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFG 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V DH A++ + Sbjct: 182 VEATISNCSNNYGPYQHIEKFIPRQITNLIDGVRPKLYGAGENVRDWIHVLDHNDAVWDI 241 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG N E+ N ++V E+ L P Y H + DRPGHD RYAI Sbjct: 242 IEKGRIGETYLIGANGEKNNKEVV-ELILELMGHAPDDYEH------VADRPGHDMRYAI 294 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E+GW P+ + SGL T+ WY DN WWRPL E++ Sbjct: 295 DNSKLVEELGWAPKFTDFRSGLQATIDWYRDNEAWWRPLKAEVE 338 >gi|329569823|gb|EGG51582.1| dTDP-glucose 4,6-dehydratase [Enterococcus faecalis TX1467] Length = 342 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 202/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ + S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLP-SDRVELVVGDIA 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++AAESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A+ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVSAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRV 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|222153257|ref|YP_002562434.1| dTDP-glucose-4,6-dehydratase [Streptococcus uberis 0140J] gi|222114070|emb|CAR42475.1| putative dTDP-glucose-4,6-dehydratase [Streptococcus uberis 0140J] Length = 348 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 146/344 (42%), Positives = 199/344 (57%), Gaps = 34/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN ++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKENIASI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDQLAS--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L + F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 -KYDIRFHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETKYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KG+IGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 234 STGVWAILTKGKIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRAG 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 HD RYAIDSSK++ E+GW P+ N E GL +T+ WY D+ WW+ Sbjct: 287 HDLRYAIDSSKLRDELGWTPEFTNFEEGLEETIKWYTDHEDWWK 330 >gi|300768388|ref|ZP_07078290.1| dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494066|gb|EFK29232.1| dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 336 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/338 (44%), Positives = 202/338 (59%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +RL+VTGGAGFIG+ Y L + +++V ++DKLTYAGN ++ + N + DI Sbjct: 4 IRLLVTGGAGFIGANFVTYVLQHHSEVEVTILDKLTYAGNRANIASL-LGNRVKLVIGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ Q D IV+FAAESH D S++ FI TNI+GT+ L++ Sbjct: 63 CDGPLVAKLVR--QTDMIVHFAAESHNDNSLIDPWPFIRTNIVGTYTLIQAA-------- 112 Query: 120 QDKKDQFRFLQISTDEVYGSL----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K RF +STDEVYG L F+ PY PSSPYSA+KASSD LV AW ++ Sbjct: 113 --SKYHKRFHHVSTDEVYGDLPLSGSNEKFTPTSPYQPSSPYSASKASSDMLVRAWIRSF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +SNCSNNYGPY EK IP IT ++ G LYG G N+RDW++V DH A++ Sbjct: 171 GLQATISNCSNNYGPYQHIEKFIPRQITNILSGRRPKLYGSGSNIRDWIHVNDHSAAIWD 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KG+IGE Y IG N E N V E+ L +Y ++DRPGHD RYA Sbjct: 231 ILTKGKIGETYFIGVNGEMSN-KAVLEMILKLMKQPQNAYD------IVKDRPGHDLRYA 283 Query: 296 IDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWR 332 ID+SKI+ E+GW + +SGL +T+ WY+D+ WW+ Sbjct: 284 IDASKIRDELGWQSLYTDFQSGLQETINWYVDHQDWWQ 321 >gi|116514776|ref|YP_813682.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094091|gb|ABJ59244.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 328 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/273 (53%), Positives = 192/273 (70%), Gaps = 14/273 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++IVTGGAGFIGS Y++ +++ +DKLTYAGNL++LK++ F F+++DI Sbjct: 1 MKIIVTGGAGFIGSNFVFYMMKKHPDYKIICLDKLTYAGNLSTLKDVMDKPNFRFVKLDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDRE + +E PD +VNFAAESHVDRSI + F+ TNIIGT +L++ R Sbjct: 61 CDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDSCR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R+ Q+STDEVYG L D+ F ED P + SSPYS++KAS+D+LV A+G TY Sbjct: 114 --KYGIKRYHQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADFLVGAYGRTY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV +S CSNNYGPY FPEKLIPL I R ++ + +YG+GQNVRDWLYVEDH +A+ L Sbjct: 172 GLPVTISRCSNNYGPYQFPEKLIPLMIQRALDDKPLPVYGEGQNVRDWLYVEDHCKAIDL 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 +L+KG +GE YNIGG+NE NIDIV I LD Sbjct: 232 ILEKGTVGEVYNIGGHNEMHNIDIVKLICDYLD 264 >gi|116618516|ref|YP_818887.1| dTDP-glucose 4,6-dehydratase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097363|gb|ABJ62514.1| dTDP-glucose 4,6-dehydratase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 345 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/354 (41%), Positives = 206/354 (58%), Gaps = 40/354 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY+V + + V V+DKLTYAGN +L + + + + DI D Sbjct: 7 ILVTGGAGFIGANFVRYIVEEHPDVFVTVLDKLTYAGNKENLAGLPEDRV-KLVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E DA++++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 66 APLVDQLVSE--TDAVIHYAAESHNDNSLKDPSPFVQTNIIGTYTLIEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P Y PSSPYS+TKASSD Sbjct: 115 -KYNKRFHHVSTDEVYGDLP---LREDLPGHGEGAGEKFTPESQYRPSSPYSSTKASSDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SN SNNYGPY EK IP +T +I G LYG+G+NVRDW++ Sbjct: 171 LVRAWVRSFGLQATISNTSNNYGPYQHIEKFIPRQVTNIISGIKPKLYGNGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L KG+IGE Y +G + E+ NI + L A++ + F++D Sbjct: 231 YDHATAVWAILTKGKIGETYLVGADGEKDNITV-------LRAILKDMGKAEDDFDFVQD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 R GHD RYAID++KI+ E+GW P+ + E+GL T+ WY DN WW+ E++ Sbjct: 284 RSGHDLRYAIDATKIREELGWTPKYTDFETGLADTIQWYKDNQAWWQAEKDEVE 337 >gi|313890129|ref|ZP_07823764.1| dTDP-glucose 4,6-dehydratase [Streptococcus pseudoporcinus SPIN 20026] gi|313121490|gb|EFR44594.1| dTDP-glucose 4,6-dehydratase [Streptococcus pseudoporcinus SPIN 20026] Length = 348 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/351 (41%), Positives = 203/351 (57%), Gaps = 34/351 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANIEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDQLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L + F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 -KYDIRFHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETKYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 234 STGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILAKMGQPKDAYDHVTDRAG 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 HD RYAIDSSK++ E+GW P+ N E GL +T+ WY ++ WW+ E++ Sbjct: 287 HDLRYAIDSSKLRQELGWTPEFTNFEQGLEETINWYREHEDWWKAEKAEVE 337 >gi|71910549|ref|YP_282099.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS5005] gi|71853331|gb|AAZ51354.1| dTDP-glucose 4,6-dehydratase [Streptococcus pyogenes MGAS5005] Length = 346 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 199/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + D IV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KTDVIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|332523167|ref|ZP_08399419.1| dTDP-glucose 4,6-dehydratase [Streptococcus porcinus str. Jelinkova 176] gi|332314431|gb|EGJ27416.1| dTDP-glucose 4,6-dehydratase [Streptococcus porcinus str. Jelinkova 176] Length = 348 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/351 (41%), Positives = 203/351 (57%), Gaps = 34/351 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AALVDQLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L + F+ + YNPSSPYS+TKA+SD +V Sbjct: 115 -KYGIRFHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETKYNPSSPYSSTKAASDLIVK 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + DR G Sbjct: 234 STGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRAG 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 HD RYAIDSSK++ E+GW P+ N E GL +T+ WY ++ WW+ E++ Sbjct: 287 HDLRYAIDSSKLRQELGWTPEFTNFEKGLEETINWYAEHENWWKAEKAEVE 337 >gi|89001374|gb|ABD59207.1| InkB [Nonomuraea longicatena] Length = 304 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 198/327 (60%), Gaps = 26/327 (7%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGS R L +V V+DKLTYAGN +L + + F+ DICD Sbjct: 1 MTGGAGFIGSHFARGLGG---AEVTVLDKLTYAGNRANLDGVPHA----FVHGDICDAGL 53 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 +R L D +VNFAAESHVDRSI GA EF+ TN++GT LL+ CL + Sbjct: 54 LREVLPGH--DLVVNFAAESHVDRSIEGAAEFVRTNVLGTQTLLQ------GCLEAGVR- 104 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 + +Q+STDEVYGS+ G ++E P P SPY+A KA D + A+ T+G+ V ++ C Sbjct: 105 --KVVQVSTDEVYGSIGVGSWTESAPLRPRSPYAAAKAGGDLVAQAYAITHGLDVSITRC 162 Query: 185 SNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGE 244 NNYGP +PEK+IPL +TR++ G V LYGDG NVRDW++V DH + LV + G GE Sbjct: 163 GNNYGPRQYPEKIIPLFVTRLLRGERVPLYGDGGNVRDWVHVADHCAGIRLVAEVGLPGE 222 Query: 245 RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 Y+I G E N ++V G LL A S + + ++EDR GHDRRY++D ++++ Sbjct: 223 VYHIAGTAEMTNKELV---GHLLAA----SDADWGRVEYVEDRKGHDRRYSLDDRRLRA- 274 Query: 305 IGWFPQENMESGLNKTVCWYLDNNWWW 331 +G+ P+ + GL TV WY N WW Sbjct: 275 LGYRPEVEFDQGLRDTVRWYAANPGWW 301 >gi|3608396|gb|AAC35922.1| putative dTDP-glucose-4,6-dehydratase [Enterococcus faecalis OG1RF] Length = 342 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 149/345 (43%), Positives = 202/345 (58%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++IVTGGAGFIGS Y+V N ++ V V+DKLTYAGN +L+ I S+ + DI Sbjct: 3 KIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGIP-SDRVELVVGDIV 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + E DA+V++A ESH D S+ F+ TN+IGT+ L+E R Sbjct: 62 DAELVNRLVAE--TDAVVHYAXESHNDNSLNDPFPFVQTNLIGTYTLIEACR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL------------DKGLFSEDMPYNPSSPYSATKASSDYLV 168 K+ R+ +STDEVYG L + F+ + PYNPSSPYS+TKA SD LV Sbjct: 112 --KNNVRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLV 169 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ D Sbjct: 170 KAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTND 229 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 H A++ +L KG+IGE Y IG + E N V E+ L +Y H + DR Sbjct: 230 HSSAVWAILTKGQIGETYLIGADGEEDN-KTVMELILELMGQPVDAYEH------VNDRV 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 GHD RYAIDS++++ E+GW P+ N GL +T+ WY +N WWR Sbjct: 283 GHDLRYAIDSTRLREELGWEPEFTNFREGLAETIKWYTENEDWWR 327 >gi|322392752|ref|ZP_08066211.1| dTDP-glucose 4,6-dehydratase [Streptococcus peroris ATCC 700780] gi|321144390|gb|EFX39792.1| dTDP-glucose 4,6-dehydratase [Streptococcus peroris ATCC 700780] Length = 349 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/351 (43%), Positives = 201/351 (57%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ + V V+DKLTYAGN ++++I N + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYKHFPDVHVTVLDKLTYAGNRANIEDI-LGNRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + Q DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 VGLVDKLAS--QADAIVHYAAESHNDNSLNDPSPFIYTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDLRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIR 282 DH ++ +L KG+IGE Y IG + E+ N + I+ E+G DA Y H Sbjct: 231 NDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADA-----YDH----- 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + DR GHD RYAID+SK++ E+GW P+ N E GL +T+ WY DN WW+ Sbjct: 281 -VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEQGLRETIQWYKDNQEWWQ 330 >gi|76788555|ref|YP_329898.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae A909] gi|77405417|ref|ZP_00782511.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae H36B] gi|76563612|gb|ABA46196.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae A909] gi|77175999|gb|EAO78774.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae H36B] Length = 348 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 200/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN ++++I + + DI D Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEDI-LGDRVELVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 66 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 115 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 171 IVKAWVRSFSVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 231 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 284 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 330 >gi|291296406|ref|YP_003507804.1| dTDP-glucose 4,6-dehydratase [Meiothermus ruber DSM 1279] gi|290471365|gb|ADD28784.1| dTDP-glucose 4,6-dehydratase [Meiothermus ruber DSM 1279] Length = 342 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 205/335 (61%), Gaps = 26/335 (7%) Query: 2 RLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIG+ Y L Q++V+DKLTYAGNL +L+ + F+Q DI Sbjct: 11 RVVVTGGAGFIGANYVHYALSAHPDWQIVVLDKLTYAGNLENLEAVLHR--IEFIQGDIA 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + R AL+ DA++NFAAESHVDRS+L A F+ TNI GT +LLE R Sbjct: 69 NPADARKALQ--GADAVLNFAAESHVDRSLLDARAFVRTNIEGTLVLLEAAR-------- 118 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RFLQ+STDEVYG L D+ D P+ P SPY+A+KA +++LVLA+G ++G+ Sbjct: 119 -QAGVRRFLQVSTDEVYGDLSGTDRHSLETD-PFRPRSPYAASKAGAEHLVLAYGISHGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+++ SN YGPY +PEK+IPL IT +E + +YGDG VRD+++ DH + LVL Sbjct: 177 DVVITRGSNTYGPYQYPEKIIPLFITNALEDKPLPIYGDGSAVRDYMHALDHAAGIDLVL 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G GE YN+G + + + +A++ L +F+ DRPGHD RY++D Sbjct: 237 HRGAAGEAYNLGAREQVSGVQVA-------EAILAALGKPATLKKFVADRPGHDYRYSVD 289 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SK ++ +GW + + GL +T+ WY+ N WW+ Sbjct: 290 PSKAEA-LGWVRRYSFSRGLAETIEWYVQNPSWWQ 323 >gi|317506039|ref|ZP_07963869.1| dTDP-glucose 4,6-dehydratase [Segniliparus rugosus ATCC BAA-974] gi|316255697|gb|EFV14937.1| dTDP-glucose 4,6-dehydratase [Segniliparus rugosus ATCC BAA-974] Length = 335 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 136/336 (40%), Positives = 210/336 (62%), Gaps = 26/336 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIG+ R L ++ ++V+D LTYAGN ++L +++ F++ D+ Sbjct: 1 MKLLVTGGAGFIGANFVHRTLQTRPEVDIVVLDALTYAGNADTLGAVAER--IEFVKGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ Q DA+V+FAAE+H D ++ F+ TN++G+F LLE R Sbjct: 59 TDEALVDDLVR--QTDAVVHFAAETHNDHALTDPGSFVRTNVLGSFALLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R Q+STDEVYG L+ G F+E +NPSSPYSA+KAS D L+ AW ++G Sbjct: 110 ---RHGARLHQVSTDEVYGDLELGEDRRFAEGDAFNPSSPYSASKASGDLLLRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +S+C+NN+GP+ EK IP IT ++ G V +YGDG++VRDW++V+DH A++ + Sbjct: 167 IEATVSHCTNNFGPWQHVEKFIPRQITNLLLGGPVKVYGDGKHVRDWIHVDDHNDAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L KG G Y+IG +NE+ N+ + + L+ A E I + DRPGHDRRYA+ Sbjct: 227 LAKGEPGRTYHIGADNEQGNLAVAQLLCELVGA-------DPERIELVVDRPGHDRRYAL 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWW 331 D+ ++ +E+GW P++ + + L +TV WY ++ WW Sbjct: 280 DAGRLTAELGWSPRKTDFRAALGETVEWYREHRDWW 315 >gi|319745226|gb|EFV97545.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae ATCC 13813] Length = 361 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 199/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 20 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 78 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 79 AELVDKLAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 127 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 128 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 183 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 184 IVKAWVRSFSVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 243 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 244 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 296 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 297 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENEIWWK 343 >gi|288927151|ref|ZP_06421035.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae D17] gi|288336088|gb|EFC74485.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae D17] Length = 343 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 199/338 (58%), Gaps = 32/338 (9%) Query: 40 LNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 L ++K+ F++ DI DRE D +VNFAAESHVDRSI F++ Sbjct: 1 LGTIKDDIDDRRCLFVKGDIRDRELADRLFAGHDIDYVVNFAAESHVDRSIEDPQLFLSV 60 Query: 100 NIIGTFILLEETRLWWSCLSQDK-----KDQFRFLQISTDEVYGSLD-KGLFSEDMPYNP 153 NI+GT LL+ R W + K R+ Q+STDEVYGSL +G F+E P P Sbjct: 61 NILGTQNLLDAARRAWVTGKDAQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCP 120 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 SPYSA+K S+D V+A+ TY +PV ++ CSNNYGPYHFPEKLIPL I ++EG + + Sbjct: 121 HSPYSASKTSADLFVMAYRDTYHMPVSITRCSNNYGPYHFPEKLIPLIINNILEGKRLPV 180 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV-FEIGFLLDAL-- 270 YG+G NVRDWLYVEDH +A+ +V+++GR GE YN+GG+NE +NIDIV I + D + Sbjct: 181 YGEGTNVRDWLYVEDHCKAIDMVVREGREGEVYNVGGHNEMRNIDIVKLTIKTIHDMMAG 240 Query: 271 ------------------IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 I + + LI + DR GHD+RYAID +KIK E+GW+P+ Sbjct: 241 DKELRKVLKKQVLDDHGDIRIDWINDSLITHVADRLGHDQRYAIDPTKIKDELGWYPETK 300 Query: 313 MESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNL 350 G+ KT+ W LDN W + + DY K+ ++ Sbjct: 301 FADGIVKTIKWNLDNQQWIKEV-----TSGDYQKYYDM 333 >gi|15828065|ref|NP_302328.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae TN] gi|221230542|ref|YP_002503958.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae Br4923] gi|13093619|emb|CAC30919.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae] gi|219933649|emb|CAR72061.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae Br4923] Length = 333 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 145/339 (42%), Positives = 198/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V D V V+D +TYAG SL ++ + +Q +I Sbjct: 3 MRLLVTGGAGFIGANFVHNAVRDHPDDTVTVLDAMTYAGRHESLADVDHA--VRLVQGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E D +V+FAAE+HVD ++ + F+ TN+IGTF +LE R Sbjct: 61 TDTKLVFRLVAE--SDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAVR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R ISTDEVYG L+ F+E PYNPSSPYSATKA+ D LV AW +YG Sbjct: 112 ---HHSVRLHHISTDEVYGDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYG 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 169 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGTGVNVRDWIHVDDHNSAVWQI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG+IG Y IG N N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 229 LEKGQIGRTYLIGAENGHNNLTVLRTLLQMM-GRDPNDFDH------VTDRVGHDLRYAI 281 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D + + +E+ W P+ N + GL T+ WY +N WWRPL Sbjct: 282 DPTPLYNELCWAPKHANFDEGLRATIDWYRNNESWWRPL 320 >gi|77412865|ref|ZP_00789070.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 515] gi|77161161|gb|EAO72267.1| dTDP-glucose 4,6-dehydratase [Streptococcus agalactiae 515] Length = 346 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 199/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +++ I + + DI D Sbjct: 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEAI-LGDRVELVVGDIAD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 64 AELVDKLAA--KADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P YNPSSPYS+TKA+SD Sbjct: 113 -KYDIRFHHVSTDEVYGDLP---LREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++ + +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 169 IVKAWVRSFSVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGRIGE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 229 NDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N WW+ Sbjct: 282 RAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWK 328 >gi|184155877|ref|YP_001844217.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] gi|183227221|dbj|BAG27737.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] Length = 310 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 200/322 (62%), Gaps = 18/322 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS RY ++ +V+ +D LTYAGNL ++ +++ + + F+Q DI Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L Q D +VNFAAESHVDRSI F++TN++G +LL+ R Sbjct: 61 RDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R +Q+STDEVYGS+ G E+ P PSSPY+ATKAS+D L +A HT+G V Sbjct: 114 ---RARVRLVQVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +NNYGP PEKL+P+ IT + + + G G ++RDWLYV D+ +A+ LV++K Sbjct: 171 VITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG R +++V + LL P S + + +R GHD RYA+D + Sbjct: 231 GVEGEVYNIGGFERRTVLEVVASLQALLG--FPDSQ-----VVHVAERLGHDHRYAVDDT 283 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 K++ +GW P ++ +GL +TV Sbjct: 284 KLRRALGWRPSTSLAAGLTQTV 305 >gi|4539118|emb|CAB39839.1| putative dTDP-(glucose or rhamnose)-4,6-dehydratase [Mycobacterium leprae] Length = 331 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/339 (42%), Positives = 198/339 (58%), Gaps = 26/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V D V V+D +TYAG SL ++ + +Q +I Sbjct: 1 MRLLVTGGAGFIGANFVHNAVRDHPDDTVTVLDAMTYAGRHESLADVDHA--VRLVQGNI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E D +V+FAAE+HVD ++ + F+ TN+IGTF +LE R Sbjct: 59 TDTKLVFRLVAE--SDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R ISTDEVYG L+ F+E PYNPSSPYSATKA+ D LV AW +YG Sbjct: 110 ---HHSVRLHHISTDEVYGDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGTGVNVRDWIHVDDHNSAVWQI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+KG+IG Y IG N N+ ++ + ++ P + H + DR GHD RYAI Sbjct: 227 LEKGQIGRTYLIGAENGHNNLTVLRTLLQMM-GRDPNDFDH------VTDRVGHDLRYAI 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D + + +E+ W P+ N + GL T+ WY +N WWRPL Sbjct: 280 DPTPLYNELCWAPKHANFDEGLRATIDWYRNNESWWRPL 318 >gi|296394661|ref|YP_003659545.1| dTDP-glucose 4,6-dehydratase [Segniliparus rotundus DSM 44985] gi|296181808|gb|ADG98714.1| dTDP-glucose 4,6-dehydratase [Segniliparus rotundus DSM 44985] Length = 335 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/336 (40%), Positives = 211/336 (62%), Gaps = 26/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIG+ R + ++++V+D LTYAG+L++L+ + + +F+ D+ Sbjct: 1 MKLLVTGGAGFIGANFVRRTRHTRPDVEIVVLDALTYAGSLDTLEAVRED--IAFVHGDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ DA+V+FAAE+H D +++ F+ TNIIG+F+L E R Sbjct: 59 TDEGVVDDLVRD--SDAVVHFAAETHNDNALVRPGAFVHTNIIGSFVLAEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R Q+STDEVYG L+ G F+E +NPSSPYSA+KAS D L+ AW ++G Sbjct: 110 ---RHGVRLHQVSTDEVYGDLELGEDRRFAEGDAFNPSSPYSASKASGDLLLRAWARSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +S+C+NN+GP+ EK IP IT ++ G+ +YGDG++VRDW++V+DH A++ + Sbjct: 167 IEATISHCTNNFGPWQHVEKFIPRQITNLLTGTAPKVYGDGRHVRDWIHVDDHNDAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +G G Y+IG NE N+ + LL L+ E I + DRPGHDRRYA+ Sbjct: 227 LDRGAPGRTYHIGAGNELGNL----AVAQLLCELVGVD---PERIELVADRPGHDRRYAL 279 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWW 331 D+S++ +E+GW P++ + + L +TV WY ++ WW Sbjct: 280 DASRVTAELGWSPKKTDFRAALRETVDWYQEHQHWW 315 >gi|317124302|ref|YP_004098414.1| dTDP-glucose 4,6-dehydratase [Intrasporangium calvum DSM 43043] gi|315588390|gb|ADU47687.1| dTDP-glucose 4,6-dehydratase [Intrasporangium calvum DSM 43043] Length = 333 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 205/337 (60%), Gaps = 24/337 (7%) Query: 1 MRLIVTGGAGFIGSA-LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS + R + QV VID +TYA N SL+ + + + ++ ++ Sbjct: 1 MRVLVTGGAGFIGSNFVLRARESRPDWQVTVIDAMTYAANRASLEPVLSTGEVALVEGNV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + + + D +V+FAAESH D S+ F+ +N++GTF LLE R Sbjct: 61 ADADLVDALVADH--DVVVHFAAESHNDNSLDSPWPFVESNVVGTFTLLEAIR------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF ISTDEVYG L D F+E P NPSSPYSATKA +D LV AW ++G Sbjct: 112 ---RHGKRFHHISTDEVYGDLELDDPARFTEQTPVNPSSPYSATKAGADLLVRAWIRSFG 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGP EK IP IT +++G +YG G NVRDW++V+DH A+ + Sbjct: 169 IEATVSNCSNNYGPRQHVEKFIPRQITNILQGVRPKVYGSGLNVRDWIHVDDHNDAVIAI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++GR GE Y IG + ER N++IV LL+ + + + ++DRPGHD RYAI Sbjct: 229 LEQGRPGETYLIGADGERNNLEIV---AMLLELMGEPA----DWFDHVDDRPGHDLRYAI 281 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DS+K++ E W P+ ++ +GL +T+ WY N WWR Sbjct: 282 DSTKLRRETDWQPRFGDLRAGLAQTIDWYRANESWWR 318 >gi|170017545|ref|YP_001728464.1| dTDP-glucose 4,6-dehydratase [Leuconostoc citreum KM20] gi|169804402|gb|ACA83020.1| dTDP-glucose 4,6-dehydratase [Leuconostoc citreum KM20] Length = 345 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 148/351 (42%), Positives = 208/351 (59%), Gaps = 34/351 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY+V + I V V+DKLTYAGN +L + + + + DI D Sbjct: 7 ILVTGGAGFIGANFVRYIVEEHPDIFVTVLDKLTYAGNRANLAGLPEDRV-KLVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E DA++++AAESH D S+ F+ TNIIGT+ LLE R Sbjct: 66 APLVDQLVSE--TDAVIHYAAESHNDNSLQDPSPFVQTNIIGTYTLLEAVR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSL---------DKGL---FSEDMPYNPSSPYSATKASSDYLVL 169 K RF +STDEVYG L +G+ F+ + PY PSSPYS+TKA SD LV Sbjct: 115 -KYNKRFHHVSTDEVYGDLPLREDLPGHGEGVGEKFTPESPYRPSSPYSSTKAGSDLLVR 173 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SN SNNYGPY EK IP +T ++ G LYG+G+NVRDW++ DH Sbjct: 174 AWVRSFGVQATISNTSNNYGPYQHIEKFIPRQVTSILSGIKPKLYGNGKNVRDWIHTYDH 233 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++ +L KG+IGE Y +G + E+ NI ++ I L D P+ + F++DR G Sbjct: 234 ATAVWAILTKGKIGETYLVGADGEKDNITVLRAI--LKDMGKPE-----DDFDFVQDRSG 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 HD RYAID++K+ E+GW P+ + SGL T+ WY DN WW+ E++ Sbjct: 287 HDLRYAIDATKMHEELGWQPKYTDFASGLAHTIQWYTDNQDWWQAEKAEVE 337 >gi|254455841|ref|ZP_05069270.1| dTDP-glucose 4,6-dehydratase [Candidatus Pelagibacter sp. HTCC7211] gi|207082843|gb|EDZ60269.1| dTDP-glucose 4,6-dehydratase [Candidatus Pelagibacter sp. HTCC7211] Length = 339 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 9/334 (2%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 LIVTGG GFIGS L + L+ K ++ ID ++Y+ N +LK++ + N + F++ DI ++ Sbjct: 5 LIVTGGLGFIGSNLIKLLL-KKKFSIINIDNVSYSSNFFNLKDLPKKN-YKFIKCDINNK 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + K ++P AI N AAE+HVDRSI FI +NI+G F LLE R + + Sbjct: 63 KKLVNIFKVYKPLAIFNLAAETHVDRSIDSPKSFIESNIVGVFNLLEAFREHYKKYKKI- 121 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + ISTDEV+G + KG +ED PY PSSPY+A+KASS++LV ++ T+ IP +++ Sbjct: 122 ----KLIHISTDEVFGDIIKGRSNEDYPYKPSSPYAASKASSNHLVSSYVRTFKIPAIIT 177 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 NCSNNYGP PEKLIP I ++ + +YGDG+N R+W++VEDH AL+ V KKG+I Sbjct: 178 NCSNNYGPCQHPEKLIPKLIYNILNNIPLPIYGDGKNSREWIFVEDHCDALFQVFKKGKI 237 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIK 302 GE YNIG N N++I ++ + I K +H + I++++DRPGHD+RYA++S KI Sbjct: 238 GEFYNIGSNKNYNNLEITKKLINISSQHI-KPGNHVK-IKYVKDRPGHDKRYALNSDKIN 295 Query: 303 SEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 ++ W + GL KT WYL+N +++ + K Sbjct: 296 KKLLWKSSTGINKGLKKTFLWYLNNQKYFKSIKK 329 >gi|256371533|ref|YP_003109357.1| dTDP-glucose 4,6-dehydratase [Acidimicrobium ferrooxidans DSM 10331] gi|256008117|gb|ACU53684.1| dTDP-glucose 4,6-dehydratase [Acidimicrobium ferrooxidans DSM 10331] Length = 335 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 141/339 (41%), Positives = 203/339 (59%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIGS V +++V+D TYAG SL+++ ++ DI Sbjct: 1 MRLLVTGGAGFIGSNYVHERVARHPDDRIVVLDAFTYAGCRESLRDVDDH--IRIVEGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + S L E + + IVNFAAESH +I+ + F TN++GT LLE R Sbjct: 59 GDTELVSSLLDEERIEVIVNFAAESHNSLAIIDPERFFRTNVLGTVGLLEAAR------- 111 Query: 120 QDKKDQF-RFLQISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D RF +ST EVYG L+ + F+ED PY P +PY+A+KA +D+ V A+ TY Sbjct: 112 --RHDGLVRFHHVSTCEVYGDLELDEERAFTEDDPYRPRTPYNASKAGADHAVRAYHLTY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P+ ++NC+NNYGPY FPEK+IPL +TR + + + +Y +N R+W++V DH A+ Sbjct: 170 GVPITITNCANNYGPYQFPEKVIPLFVTRALRDAPLPMYASKENRREWIHVRDHAAAIDR 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL+ G +GE Y++G ER I + LL P+S LI + DRP HDRRY Sbjct: 230 VLEAGTVGETYHVGTGVERSIEQIATSVLDLLGK--PRS-----LIEVVPDRPSHDRRYV 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +DS+K+++ +GW P + GL TV WY+++ WW PL Sbjct: 283 LDSTKLRTSLGWEPTVAFDEGLASTVAWYVEHPEWWEPL 321 >gi|326692663|ref|ZP_08229668.1| dTDP-glucose 4,6-dehydratase [Leuconostoc argentinum KCTC 3773] Length = 345 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 145/354 (40%), Positives = 206/354 (58%), Gaps = 40/354 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY+V + + V V+DKLTYAGN +L + + + + DI D Sbjct: 7 ILVTGGAGFIGANFVRYIVEEHPDVFVTVLDKLTYAGNKENLAGLPEDRV-KLVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + E DA++++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 66 AELVDQLVAE--TDAVIHYAAESHNDNSLKDPSPFVQTNIIGTYTLIEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P Y PSSPYS+TKA SD Sbjct: 115 -KYNKRFHHVSTDEVYGDLP---LREDLPGHGEGAGEKFTPESQYRPSSPYSSTKAGSDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SN SNNYGPY EK IP +T ++ G LYG+G+NVRDW++ Sbjct: 171 LVRAWVRSFGLQATISNTSNNYGPYQHIEKFIPRQVTNILSGIKPKLYGNGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L KG+IGE Y +G + E+ NI + L A++ + F++D Sbjct: 231 YDHATAIWAILTKGKIGETYLVGADGEKDNITV-------LRAILKDMGKAEDDFDFVQD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 R GHD RYAID++K++ E+GW P+ + E+GL T+ WY DN WW+ E++ Sbjct: 284 RSGHDLRYAIDATKMREELGWTPKYTDFETGLADTIQWYADNQDWWQGEKAEVE 337 >gi|299783469|gb|ADJ41467.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum CECT 5716] Length = 310 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 199/322 (61%), Gaps = 18/322 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS RY ++ +V+ +D LTYAGNL ++ +++ + + F+Q DI Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L Q D +VNFAAESHVDRSI F++TN++G +LL+ R Sbjct: 61 RDAATVSEVLXTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R +Q+STDEVYGS+ G E+ P PSSPY+ATKAS+D L +A HT+G V Sbjct: 114 ---RAXVRLVQVSTDEVYGSIXAGRXDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +NNYGP PEKL+P+ IT + + + G G ++RDWLYV D+ +A+ LV++K Sbjct: 171 VITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRK 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G GE YNIGG R +++V + LL P S + + +R GHD RYA+D + Sbjct: 231 GVZGEVYNIGGFERRTVLEVVAXLQALLG--FPXSQ-----VVHVAERLGHDHRYAVDDT 283 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 K++ +GW P ++ +GL +TV Sbjct: 284 KLRRALGWRPSTSLAAGLTQTV 305 >gi|320095841|ref|ZP_08027479.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977230|gb|EFW08935.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 178 str. F0338] Length = 335 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 155/346 (44%), Positives = 209/346 (60%), Gaps = 26/346 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQV 57 M+++VTGGAGFIG+ L+ D + V+V+DK TYAGN SL ++ Q+ + ++ Sbjct: 1 MKIVVTGGAGFIGANFVHTLLEDHPGVDVVVLDKFTYAGNRASLTDVPADQAARLAVVEG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + + DA+V+FAAESH D S+L FI TN++GTF LLE R Sbjct: 61 DIADADLVDGVVA--GADAVVHFAAESHNDNSLLDPSPFIQTNLVGTFTLLEAVR----- 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + RF ISTDEVYG L D F+ PYNPSSPYS++KA SD LV AW + Sbjct: 114 -----RHKVRFHHISTDEVYGDLELDDPAKFTPATPYNPSSPYSSSKAGSDLLVRAWVRS 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ +SNCSNNYGPY EK IP IT + G LYGDG NVRDW++V DH A++ Sbjct: 169 FGVEATISNCSNNYGPYQHIEKFIPRMITNRLRGVRPRLYGDGLNVRDWIHVRDHNTAVW 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L +GRIGE Y IG + E N ++V + L+ + H + DRPGHD RY Sbjct: 229 EILMRGRIGETYLIGADGETNNREVVAVLNELM-GYPADDFDH------VTDRPGHDLRY 281 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 AID+SK+ +E+GW P+ N GL T+ WY DN WW PL + ++ Sbjct: 282 AIDNSKLVTELGWEPRFTNFRDGLADTIAWYTDNEAWWAPLKEAVE 327 >gi|326200992|ref|ZP_08190864.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM 2782] gi|325988560|gb|EGD49384.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM 2782] Length = 340 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 142/332 (42%), Positives = 204/332 (61%), Gaps = 14/332 (4%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKE--ISQSNLFSFLQVDIC 60 ++TGGAGFIGS RY++ + K I ++ +DKLTYAGN ++L I+ +N + F DIC Sbjct: 5 LITGGAGFIGSNYIRYMLKNHKDIFIINVDKLTYAGNTDNLTGALINDAN-YKFYCCDIC 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I + + D +VNFAAESHVDRS+ EFI TNI GT L+ R W Sbjct: 64 DKDKIEEIFRTHKIDYVVNFAAESHVDRSMTNTKEFIETNITGTVNLMNVARKAWEIRDN 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D RFL ISTDEVYGS + +E+ P NP +PYS +KA++++ V + Y PV Sbjct: 124 EYIDGVRFLHISTDEVYGSCTE-CCTEESPLNPHNPYSCSKAAAEFYVKCYWDAYRFPVN 182 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNNYGP +PEKLIPL I +E + +YGDG +RDW+YVED+ A+ LVL +G Sbjct: 183 ITRSSNNYGPNQYPEKLIPLMIHNTMENLKLPVYGDGMQMRDWIYVEDNCSAIDLVLHEG 242 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHDRRYAIDS 298 + GE YNI + N F++D ++ K ++IR ++DR D Y+I++ Sbjct: 243 QPGEVYNIATEKKYHN-------RFVVDKILTYIKGEVREDMIRHVQDRKASDLCYSINT 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 KI+ ++GW P + + GL+KT+ WYLDN W Sbjct: 296 RKIREKLGWSPSVDFDKGLDKTIEWYLDNRNW 327 >gi|48477382|ref|YP_023088.1| dTDP-glucose 4,6-dehydratase [Picrophilus torridus DSM 9790] gi|48430030|gb|AAT42895.1| dTDP-glucose 4,6-dehydratase [Picrophilus torridus DSM 9790] Length = 328 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 201/334 (60%), Gaps = 27/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD- 61 +VTGGAGFIGS YL ++ ++ IDKL+Y NL +LK + + + F++ DI D Sbjct: 4 FLVTGGAGFIGSNFINYLNDNYNCNIINIDKLSYGSNLENLKNLKDN--YKFIKRDINDD 61 Query: 62 -RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I A D I+NFAAESHVDRSI D FI +NI G +LE R + Sbjct: 62 LSDVINDA------DYIINFAAESHVDRSIANPDSFIKSNINGVVNILENIR-------K 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D +QI TDE YG + G F E PSSPYSA+KASS + L++ TYGI V+ Sbjct: 109 SKNDPV-MIQIGTDEEYGDIINGSFDERSVLKPSSPYSASKASSSLIALSYYRTYGIKVI 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNN+G Y FPEKLIP I R I + LYG G+N RDW+YVED+++A+ VL G Sbjct: 168 VTRTSNNFGRYQFPEKLIPKTIIRNILDMDIPLYGSGENKRDWIYVEDNIKAILKVLFNG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YNI NNE NI+IV +I D + K I+++ DRPGHD RY+I++ K Sbjct: 228 KYGEIYNISSNNEYSNIEIVNKI---FDIMNKKG-----RIKYVSDRPGHDVRYSINADK 279 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 IK ++GW P+ + + L TV WYL+N WW L Sbjct: 280 IK-KLGWKPEHSFDDALKMTVEWYLNNRSWWSGL 312 >gi|16224029|gb|AAL15610.1|AF322256_31 Sim24 [Streptomyces antibioticus] Length = 319 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 141/336 (41%), Positives = 199/336 (59%), Gaps = 25/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND----LKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR+ VTGGAGFIGS R LV + L +Q V+V+D LTYAG L++L + F Sbjct: 1 MRVAVTGGAGFIGSNFVRDLVGERFAALDVQHVVVLDNLTYAGTLDNLTGVLDD--VEFH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DICD + + + DA+V+FAAESHVDRSI F+ +N++GT +LE Sbjct: 59 RTDICDTQAVTRQI--VGCDAVVHFAAESHVDRSISSGLPFMRSNVLGTQSVLEAAA--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ISTDEVYGS+ G ED P P+SPY+A+KA SD + LA+ T+ Sbjct: 114 ------AAGAARFVHISTDEVYGSIPVGATGEDAPLAPNSPYAASKAGSDLVALAFARTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV ++ CSNNYGPY PEK IP +T ++ G + LYG G NVRDWL+V DH +A+ L Sbjct: 168 GLPVTVTRCSNNYGPYQNPEKAIPHFVTTLLRGGDIPLYGAGTNVRDWLHVGDHGKAVAL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L + YNIGG ++ N+ + +LD L + + + F+ DR HD RY Sbjct: 228 LLAGTPKEQVYNIGGGHQITNLQLAH---IILDELGLDA----DRVSFVPDRKAHDARYC 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D S+++ E G+ P+ + + +T+ WY DN WW Sbjct: 281 VDDSRLREEFGYRPERDFAEAIRETISWYSDNRSWW 316 >gi|260495041|ref|ZP_05815170.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_33] gi|260197484|gb|EEW95002.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_33] Length = 341 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 196/322 (60%), Gaps = 49/322 (15%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR+ I E + D +VNFAAESHVDRSI F+ TNI+GT LL+ + W+ Sbjct: 1 MDIRDRKEIERIFSENKIDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDHAKKSWT 60 Query: 117 CLSQDK------KDQFRFLQISTDEVYGSLDKG--------------------------- 143 +S+DK ++ ++LQ+STDEVYGSL K Sbjct: 61 -VSKDKNGYPVYREGVKYLQVSTDEVYGSLSKDYNEPIELVIDDEAVKKVVKNRKDLKTY 119 Query: 144 ---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPL 200 F+E+ P +P SPYSA+K +D++V+A+G TY +P+ ++ CSNNYGPY FPEKLIPL Sbjct: 120 GDKFFTEESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYQFPEKLIPL 179 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 I ++EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV Sbjct: 180 MIKNILEGEKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIV 239 Query: 261 FEIGFLLDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWF 308 I +L I + + +LI +I+DR GHD RYAI+SSKI ++GW+ Sbjct: 240 KLIINILKEEITNNDEYKKVLKTDISNISYDLITYIQDRLGHDMRYAINSSKIAKDLGWY 299 Query: 309 PQENMESGLNKTVCWYLDNNWW 330 P+ + E+G+ KT+ WYL+N W Sbjct: 300 PETDFETGIRKTIKWYLENQDW 321 >gi|227497956|ref|ZP_03928136.1| dTDP-glucose 4,6-dehydratase [Actinomyces urogenitalis DSM 15434] gi|226832614|gb|EEH64997.1| dTDP-glucose 4,6-dehydratase [Actinomyces urogenitalis DSM 15434] Length = 331 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 209/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIG+ + LV +V V+DKLTYAGN SL ++ + + + DI Sbjct: 1 MNVLITGGAGFIGANFVHQTLVRHPDAKVTVLDKLTYAGNKGSLADLGER--VTLVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + E D +V+FAAESH D S+L FI TN++GTF LLE R Sbjct: 59 ADADTVDPLVAE--ADVVVHFAAESHNDNSLLDPSPFIRTNLVGTFTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF ISTDEVYG L D F PYNPSSPYS++KA SD LV AW ++G Sbjct: 110 ---RHKVRFHHISTDEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V DH A++ + Sbjct: 167 VEATISNCSNNYGPYQHIEKFIPRQITNLIDGVKPKLYGAGENVRDWIHVLDHNDAVWDI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG N E+ N ++V E+ L Y H + DRPGHD RYAI Sbjct: 227 IEKGRIGETYLIGANGEKNNKEVV-ELILELMGYDKDDYEH------VNDRPGHDMRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E+GW P+ + SGL T+ WY N WWRPL E++ Sbjct: 280 DNSKLVEELGWSPKYTDFRSGLQATIDWYTTNEAWWRPLKAEVE 323 >gi|146318952|ref|YP_001198663.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 05ZYH33] gi|145689758|gb|ABP90264.1| dTDP-glucose 4,6-dehydratase [Streptococcus suis 05ZYH33] Length = 397 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 199/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+ N+ + V V+DKLTYAGN +L+ I + + DI D Sbjct: 56 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIAD 114 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + DAIV++AAESH D S+ FI TN IGT+ LLE R Sbjct: 115 AELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAAR--------- 163 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVY L ED+P YNPSSPYS+TKA+SD Sbjct: 164 -KYDIRFHHVSTDEVYVDLP---LREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDL 219 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG+G+NVRDW++ Sbjct: 220 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 279 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH ++ +L KGR+GE Y IG + E+ N ++ L+ ++ K + + D Sbjct: 280 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTD 332 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID+SK++ E+GW PQ + GL +T+ WY DN WW+ Sbjct: 333 RAGHDLRYAIDASKLRDELGWTPQFTDFSQGLEETIQWYTDNQDWWK 379 >gi|228964267|ref|ZP_04125386.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795364|gb|EEM42852.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar sotto str. T04001] Length = 282 Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 133/269 (49%), Positives = 182/269 (67%), Gaps = 11/269 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K + +SF++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINYDALTYSGNLNNVKSLQNHPNYSFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE + Sbjct: 61 QNGELLEHIIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +Q+STDEVYGSL K G F+E P P+SPYS++KAS+D + L++ TY +P Sbjct: 114 --KYSHIKLVQVSTDEVYGSLGKIGKFTEKTPLAPNSPYSSSKASADLIALSYYKTYHLP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ CSNNYGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL Sbjct: 172 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLL 267 KGR+GE YNIGGNNE+ N+++V +I LL Sbjct: 232 KGRVGEVYNIGGNNEKTNVEVVEQIITLL 260 >gi|227549715|ref|ZP_03979764.1| dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium lipophiloflavum DSM 44291] gi|227078211|gb|EEI16174.1| dTDP-(glucose or rhamnose)-4,6-dehydratase [Corynebacterium lipophiloflavum DSM 44291] Length = 329 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/345 (40%), Positives = 202/345 (58%), Gaps = 33/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIG+ R L + + V+D LTYAGN +L + F+ + Sbjct: 3 RVLVTGGAGFIGTNFVRLLRERRPGVHITVLDALTYAGNRANLDGLD----VKFVHGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + D +V+FAAESH D S+ F+ TN++GTF LLE R + Sbjct: 59 DAQLVGGLVAD--SDTVVHFAAESHNDNSLADPSPFVHTNVVGTFTLLEAVRRF------ 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF ISTDEV+G L G F+E YNPSSPYSATKA SD+LV AW ++GI Sbjct: 111 ----GVRFHHISTDEVFGDLPLGGDEKFTETTAYNPSSPYSATKAGSDHLVRAWVRSFGI 166 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGPY EK IP IT +++G LYG G VRDW++V+DH A+ +L Sbjct: 167 KATISNCSNNYGPYQHIEKFIPRQITNILDGRPAKLYGSGAQVRDWIHVDDHNDAVLAIL 226 Query: 238 KKGRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++G+IGE YNIG G N +V ++ ++ +Y H + DRPGHD+RY + Sbjct: 227 ERGKIGETYNIGVGGTHVTNKQVV----EMICEIMGGTYEH------VADRPGHDQRYTM 276 Query: 297 DSSKIKSEIGWFPQE--NMESGLNKTVCWYLDNNWWWRPLYKELK 339 D++K+ E+GW P + +GL +T+ WY ++ WWR + +++ Sbjct: 277 DATKLTRELGWQPHHAPELRTGLERTIAWYAEHENWWRDVKGDVE 321 >gi|145594777|ref|YP_001159074.1| dTDP-glucose 4,6-dehydratase [Salinispora tropica CNB-440] gi|145304114|gb|ABP54696.1| dTDP-glucose 4,6-dehydratase [Salinispora tropica CNB-440] Length = 324 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 23/341 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-----QVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSAL R L++ +V V+D TYAG SL + + Sbjct: 1 MRILVTGGAGFIGSALVRRLLHSTDSVLRPERVTVLDSFTYAGTEGSLGPVRDDPRLRVV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D E + +A+ DAIV+ AAESHVDRSI A F++TN+ GT +LL+ Sbjct: 61 RGDVRDVELVDAAVAGH--DAIVHLAAESHVDRSIASAAPFVSTNVGGTGVLLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RFL +STDEVYGS+ +G + P +PSSPYSA+KA++D L LA+ T+ Sbjct: 113 ---AALRHRTGRFLHVSTDEVYGSIAQGSWPPSAPLDPSSPYSASKAAADLLALAYHRTH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V+++ +N YGPY PEKLIP +T +I+G + LYGDG ++R+WL+V+DH + + L Sbjct: 170 GLDVVITRGANTYGPYQHPEKLIPRFVTNLIDGHTLPLYGDGGDIRNWLHVDDHCQGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + GR G Y++G + R N + L +L+ + + + + + DR GHDRRYA Sbjct: 230 AHRDGRAGAIYHLGSDTARTNRE-------LTGSLLAEFDAGWDRVTPVTDRKGHDRRYA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +D+++ + E+GW P + E GL TV WY +N WW PL K Sbjct: 283 LDTTETQRELGWKPTVDFEQGLAATVDWYRENRAWWEPLIK 323 >gi|32469256|dbj|BAC79030.1| NDP-glucose-4,6-dehydratase [Streptomyces sp. AM-7161] Length = 333 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 139/339 (41%), Positives = 207/339 (61%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGS R ++ ++ V+DKL+YAGN ++L + F+ Sbjct: 1 MRVLVTGGAGFIGSHYVRTMLAGGYPGYEDARITVVDKLSYAGNRDNLP--ADHPRLDFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D+CD + D +V+FAAESHVDRS+ A EF+ TN+ GT +L+ Sbjct: 59 QGDVCDLPLLLDVFPGH--DGLVHFAAESHVDRSVESAAEFVRTNVGGTQTVLD------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +C+ + R + +STDEVYGS++ G ++E P P+SPY+A+KA +D + ++ T+ Sbjct: 111 ACVETGIE---RVVHVSTDEVYGSIETGSWTESRPLLPNSPYAASKAGADLVARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + ++ CSNNYG + PEKL+PL +T ++EG + LYGDG+NVR+WL+V+DH RA+ L Sbjct: 168 RLDLSITRCSNNYGSHQHPEKLVPLFVTNLLEGLPLPLYGDGRNVREWLHVDDHCRAVQL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL G GE YN+GG NE N+D+ + L A I+ + DR GHD RYA Sbjct: 228 VLAHGGAGEIYNVGGGNEITNLDLTRRLVELCGA-------DESAIQPVADRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +D KI+ ++G+ P + GL TV WY +N WW+P+ Sbjct: 281 LDDGKIREQLGYEPLVPFDRGLADTVAWYRENPQWWKPV 319 >gi|320531342|ref|ZP_08032314.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 171 str. F0337] gi|320136433|gb|EFW28409.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 171 str. F0337] Length = 331 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/344 (45%), Positives = 209/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIG+ + LV V V+DKLTYAGN SL ++ + + + DI Sbjct: 1 MHVLITGGAGFIGANFVHQTLVRYPDATVTVLDKLTYAGNKGSLADVD--DRVTLVVGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + + Q D +V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 59 AEADVVDPLVA--QADVVVHFAAESHNDNSLRDPSPFIQTNLVGTFTLLEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF ISTDEVYG L D F PYNPSSPYS++KA SD LV AW ++G Sbjct: 110 ---RHKVRFHHISTDEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V DH A++ + Sbjct: 167 VEATISNCSNNYGPYQHIEKFIPRQITNLIDGVRPRLYGAGENVRDWIHVLDHNDAVWDI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG + E+ N ++V E+ L P Y H + DRPGHD RYAI Sbjct: 227 IEKGRIGETYLIGADGEKNNKEVV-ELILELMGHAPDDYEH------VADRPGHDMRYAI 279 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E+GW P+ + SGL T+ WY DN WWRPL E++ Sbjct: 280 DNSKLVEELGWAPKFTDFRSGLQATIDWYRDNEAWWRPLKAEVE 323 >gi|329944272|ref|ZP_08292531.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 170 str. F0386] gi|328531002|gb|EGF57858.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 170 str. F0386] Length = 353 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 208/344 (60%), Gaps = 26/344 (7%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGFIG+ + LV V V+DKLTYAGN SL ++ + + + DI Sbjct: 23 MHVLITGGAGFIGANFVHQTLVRHPDASVTVLDKLTYAGNKGSLADLD--DRVNLVVGDI 80 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + Q D +V+FAAESH D S+ FI TN++GTF LLE R Sbjct: 81 ADADVVDPLVA--QSDVVVHFAAESHNDNSLRDPSPFIQTNLVGTFTLLEAAR------- 131 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF ISTDEVYG L D F PYNPSSPYS++KA SD LV AW ++G Sbjct: 132 ---RHKTRFHHISTDEVYGDLELDDPAKFEPTTPYNPSSPYSSSKAGSDLLVRAWVRSFG 188 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT +I+G LYG G+NVRDW++V DH A++ + Sbjct: 189 VEATISNCSNNYGPYQHIEKFIPRQITNLIDGVRPKLYGAGENVRDWIHVLDHNDAVWDI 248 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KGRIGE Y IG N E+ N ++V E+ L P Y H + DRPGHD RYAI Sbjct: 249 IEKGRIGETYLIGANGEKNNKEVV-ELILELMGHEPDDYEH------VADRPGHDMRYAI 301 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E+GW P+ + SGL T+ WY N WWRPL E++ Sbjct: 302 DNSKLVEELGWAPRFTDFRSGLQATIDWYRGNEAWWRPLKAEVE 345 >gi|15897730|ref|NP_342335.1| dTDP-glucose 4,6-dehydratase (rfbB-1) [Sulfolobus solfataricus P2] gi|6015647|emb|CAB57474.1| dTDP-glucose 4,6-dehydratase (rfbB) [Sulfolobus solfataricus P2] gi|13814011|gb|AAK41125.1| dTDP-Glucose 4,6-dehydratase (rfbB-1) [Sulfolobus solfataricus P2] Length = 317 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/335 (45%), Positives = 205/335 (61%), Gaps = 34/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IV GGAGFIGSA R L N I+ +V+D LTYAG KE + F+Q D+ Sbjct: 1 MKIIVVGGAGFIGSAFVREL-NKRGIKPIVVDLLTYAGR----KENLIGTDYDFVQADVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + +KE+ PD ++NFAAE+HVDRSI +F+TTN++GT LLE +R Sbjct: 56 S-EKMHDIIKEYSPDIVINFAAETHVDRSIYKPQDFVTTNVLGTVNLLEASR-------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F+++ ISTDEVYG + E+ P PSSPYSA+KAS+D V A+ TYGI + Sbjct: 107 --KFNFKYVHISTDEVYG---EECGDENSPLKPSSPYSASKASADLFVKAYVRTYGISAV 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEKLIP AI R + G H+ +YGDG+ RDW++VED R ++ V+ + Sbjct: 162 IVRPSNNYGPRQFPEKLIPKAIIRTLLGIHIPVYGDGKAERDWIFVEDTARIIFDVVSRA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNI G +R N V EI +L+ + K I+F+ DRPGHDRRY + +S Sbjct: 222 EWKGEVYNIPG-GQRYN---VLEILKMLEEVSGKEVK----IKFVSDRPGHDRRYCMTTS 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +K E+ F + GL +T WYL+N WWW PL Sbjct: 274 -MKYEVTPFKE-----GLRRTYEWYLNNRWWWEPL 302 >gi|325967604|ref|YP_004243796.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323706807|gb|ADY00294.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 326 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 203/337 (60%), Gaps = 31/337 (9%) Query: 2 RLIVTGGAGFIGS---ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGFIGS RYL ND + V D TYAG +L + ++ D Sbjct: 5 RILVTGGAGFIGSNFVRFSRYLGND----ITVYDAFTYAGRYENLPRDVE-----VIKGD 55 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + ++ ++ P+ IVNFAAE+HVDRSI+ + FI TN+ G + +L+ + + + Sbjct: 56 ITDYDRLKDVVQRIHPEIIVNFAAETHVDRSIVNPEPFIRTNVYGVYTILKIVKEFGT-- 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 R + ISTDEVYG ++ K E+ PS+PY+ATKA+ D L++A+ TYG+ Sbjct: 114 --------RLIHISTDEVYGDMEGKEPADENTVLRPSNPYAATKAAGDALIMAFHRTYGV 165 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ SNNYGPY +PEKLIP + R + V ++GDG RDWLYVED RA+ ++ Sbjct: 166 DAIIIRPSNNYGPYQYPEKLIPRTVIRALNDIPVVVHGDGSQRRDWLYVEDTCRAVLTII 225 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG GE YN+ G NE+ + +V + +L+ PK+ LIRF+ DRPG DRRY + Sbjct: 226 EKGVSGEIYNVPGFNEKSILQVVEDALRVLNK--PKA-----LIRFVSDRPGQDRRYIMK 278 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 KI S +GW P E GL KT+ WYL+N WWWRPL Sbjct: 279 GDKILS-LGWRPLVIWEDGLKKTIKWYLENEWWWRPL 314 >gi|319949394|ref|ZP_08023460.1| dTDP-glucose 4,6-dehydratase [Dietzia cinnamea P4] gi|319436941|gb|EFV91995.1| dTDP-glucose 4,6-dehydratase [Dietzia cinnamea P4] Length = 342 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 141/346 (40%), Positives = 198/346 (57%), Gaps = 21/346 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ R +V + + V V+D +TYA N +L + ++ ++ D Sbjct: 1 MRLVVTGGAGFIGANFVRSVVREYPQAHVTVLDSMTYAANRANLDGLP-ADRVRLVEADC 59 Query: 60 CDRECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D + E + DA+V+FAAESH D S+ F+ +NI+GT+ +LE R Sbjct: 60 ADAAITDRLVSELTGRRDAVVHFAAESHNDNSLATPWPFVHSNIVGTYTILEACR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + R +STDEVYG L D F+ YNPSSPYSATKA +D LV AW + Sbjct: 115 -----RHDVRLHHVSTDEVYGDLELDDPATFTPATAYNPSSPYSATKAGADMLVRAWVRS 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+ +SNCSNNYGPY EK IP IT +++G LYG G NVRDW++V+DH A+ Sbjct: 170 FGVRATISNCSNNYGPYQHVEKFIPRQITNILDGRRPRLYGSGANVRDWIHVDDHNSAVL 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 VL+ G +G Y IG + ER N++++ I L+ + DRPGHD RY Sbjct: 230 RVLEAGELGRTYLIGADGERSNLEVMRMICELMGV---SGTGGDPGFDHVTDRPGHDLRY 286 Query: 295 AIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPLYKELK 339 AID+S + E+GW PQ + GL +TV WY + WW P+ + ++ Sbjct: 287 AIDASATRDELGWEPQHTDFREGLRQTVEWYAAHRDWWEPIKERVE 332 >gi|24940615|gb|AAN65242.1|AF329398_32 dTDP-glucose 4,6-dehydratase [Streptomyces roseochromogenes subsp. oscitans] Length = 336 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 148/339 (43%), Positives = 211/339 (62%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R + + + V+DKLTY+GN +L I+ + F+ Sbjct: 1 MRLLVTGGAGFIGSEFVRATLRGVLPGSSGTHITVLDKLTYSGNELNLAPIADLPNYRFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q DICDR + + DAIV+FAAE+HVDRSI A F+ TN +GT +LLE Sbjct: 61 QGDICDRGLVDDVVAGH--DAIVHFAAETHVDRSIDSAASFVRTNALGTQVLLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ ISTDEVYGS+ +G ++E P P++PY+A KA+ D L LAW T Sbjct: 113 ---AASRHRLGRFVHISTDEVYGSIPEGAWTEVSPVAPNAPYAAAKAAGDLLALAWHRTR 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + V+++ C+NNYGPY +PEKLIPL T +++G V +YGDG+N R WL+V DH RA+ L Sbjct: 170 RLDVVVTRCTNNYGPYQYPEKLIPLFTTNILDGQQVPVYGDGRNRRQWLHVSDHCRAIQL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE Y+IGG E N++ L + ++ +++R + DR GHD RY+ Sbjct: 230 VLLGGRPGEVYHIGGGIELTNLE-------LAEHILAACGVGWDMVRHVPDRLGHDLRYS 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++++KI++E+G+ P+ GL +TV WY + WW PL Sbjct: 283 LETAKIRTELGFSPRVAFAEGLAETVEWYRTHRGWWEPL 321 >gi|320335561|ref|YP_004172272.1| dTDP-glucose 4,6-dehydratase [Deinococcus maricopensis DSM 21211] gi|319756850|gb|ADV68607.1| dTDP-glucose 4,6-dehydratase [Deinococcus maricopensis DSM 21211] Length = 340 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 204/336 (60%), Gaps = 20/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGG GFIGS RY + +LV DK+TYA +L ++ ++ SFLQ DI Sbjct: 1 MKIMVTGGCGFIGSNFVRYWHTRHPEDHLLVYDKMTYAARKENLHDLWENEQISFLQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + +R A E Q + IVNFAAE+HVD+SI G F TN+ GT +LLE R Sbjct: 61 AEMSAVRRACLEHQTELIVNFAAETHVDQSIAGPLVFTDTNVRGTHVLLEVAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF ISTDEVYG + D+ +E+ P P SPY+A+KA++D LV A+ TYG+P Sbjct: 114 ---ELGIRFHHISTDEVYGHIEDQHQSTEEDPLLPRSPYAASKAAADQLVQAYHITYGLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ SNN GP+ +PEK +PL T ++ G + +YGDG +RD+ +V DH + VL Sbjct: 171 VTITRGSNNVGPFQYPEKAVPLFSTNVLLGEPLPVYGDGLQMRDYTHVIDHCSGIEAVLL 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YN+G E N+++V D ++ + + LIR ++DRPGHDRRY+++ Sbjct: 231 RGQPGEVYNVGTGEEMTNLEMV-------DIVLQELNGNPSLIRHVQDRPGHDRRYSMNI 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SK+++ +GW P + + + WY +N WWW P+ Sbjct: 284 SKMRN-LGWTPAFHPRQAVAEAARWYAENRWWWEPI 318 >gi|296111856|ref|YP_003622238.1| dTDP-glucose 4,6-dehydratase [Leuconostoc kimchii IMSNU 11154] gi|295833388|gb|ADG41269.1| dTDP-glucose 4,6-dehydratase [Leuconostoc kimchii IMSNU 11154] Length = 345 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 145/354 (40%), Positives = 204/354 (57%), Gaps = 40/354 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY+V + + V V+DKLTYAGN +L + + + + DI D Sbjct: 7 ILVTGGAGFIGANFVRYIVEEHPDVFVTVLDKLTYAGNKENLAGLPEDRV-KLVVGDIVD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E DA++++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 66 APLVDQLVSE--TDAVIHYAAESHNDNSLKDPSPFVQTNIIGTYTLIEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P Y PSSPYS+TKA SD Sbjct: 115 -KYNKRFHHVSTDEVYGDLP---LREDLPGHGEGAGEKFTSESQYRPSSPYSSTKAGSDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SN SNNYGPY EK IP +T +I G LYG G+NVRDW++ Sbjct: 171 LVRAWVRSFGLQATISNTSNNYGPYQHIEKFIPRQVTNIIAGIKPKLYGAGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L +G+IGE Y +G + E+ NI + L A++ + F++D Sbjct: 231 YDHATAVWAILTQGKIGETYLVGADGEKDNITV-------LRAILKDMGKAEDDFDFVKD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 R GHD RYAID++KI+ E+GW P+ + E+GL T+ WY DN WW+ E++ Sbjct: 284 RSGHDLRYAIDATKIREELGWTPKYTDFETGLADTIKWYQDNQSWWQAEKNEVE 337 >gi|2326950|gb|AAB66648.1| rhamnose biosynthesis protein [Mycobacterium tuberculosis] Length = 329 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 149/339 (43%), Positives = 195/339 (57%), Gaps = 27/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MRL+VTGGAGFIG+ V + V V+D LTYAG SL ++ + +Q DI Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDA--IRLVQGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + + E DA+V+FAAESHVD ++ + F+ TN+IGTF +LE R Sbjct: 59 TDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEVYG L D+ F+E PYNPSSPYSATKA +D LV AW + Sbjct: 110 ---RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSLC 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT + G + LYGDG NVRDW++V+DH A+ + Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNCLTGL-LKLYGDGGNVRDWIHVDDHNSAVRRI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GRIGE Y I ER N+ ++ + L+D P + H + DR HD RYAI Sbjct: 226 LDRGRIGETYLISSEGERDNLTVLRSLLRLMDR-DPDDFDH------VTDRVAHDLRYAI 278 Query: 297 DSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 D S++ E+ W P+ + E L T+ WY DN W L Sbjct: 279 DPSRLYDELCWAPKHTDFERALRTTIDWYRDNESWLASL 317 >gi|257387275|ref|YP_003177048.1| dTDP-glucose 4,6-dehydratase [Halomicrobium mukohataei DSM 12286] gi|257169582|gb|ACV47341.1| dTDP-glucose 4,6-dehydratase [Halomicrobium mukohataei DSM 12286] Length = 308 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 213/327 (65%), Gaps = 20/327 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS +++++ + +V+ +D LTYAG+ ++L + F++ DI Sbjct: 1 MRILVTGGAGFIGSNFVHHVLDEHEDDEVITLDALTYAGSKDNLDGVLDDPRHEFVEGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + + DAIVNFAAESHVDRSI G+ F+TTN+ GT LL+ + Sbjct: 61 RDHDLVTDLVDDI--DAIVNFAAESHVDRSIEGSKPFVTTNVQGTQTLLD---------A 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ D RFLQISTDEVYG + G FSE+ NP +PY+ATKA +D L ++ T+ +PV Sbjct: 110 ANEADIDRFLQISTDEVYGQILDGKFSENDSLNPRNPYAATKAGADLLAQSFQTTHDLPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++ NN+GP PEKLIP I G + +YGDG NVR+W+YVED+ RAL ++L++ Sbjct: 170 LITRTCNNFGPRQHPEKLIPKFIQNADSGEELPVYGDGLNVREWIYVEDNCRALDIILRE 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G+ YNIG E+ N+++ +A++ + +LI F++DR GHD+RYA+++ Sbjct: 230 GDVGDVYNIGSYAEKTNLEVT-------EAILDAVDADDDLITFVDDRAGHDQRYALETE 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLD 326 KI++ +GW P+ E GL +TV +YL+ Sbjct: 283 KIEA-LGWKPEYTFEEGLERTVNYYLN 308 >gi|227487173|ref|ZP_03917489.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541659|ref|ZP_03971708.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092831|gb|EEI28143.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182627|gb|EEI63599.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51866] Length = 327 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 147/335 (43%), Positives = 198/335 (59%), Gaps = 31/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS C Y +V V+D LTYAGN S+ E + + I Sbjct: 1 MNILVTGGAGFIGSNFCHYTRAHYDHEVTVLDALTYAGNPASVPEGCR-----LVHGSIL 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + +K Q D +V+FAAESH D S+ F+ TN+ GT ++ +C Sbjct: 56 DEELVDALVK--QSDVVVHFAAESHNDNSLRDPLAFVRTNVEGTTVIAA------ACARH 107 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D R ISTDEVYG L F+ D PY PSSPYSA+KAS+D++V A+G ++G+ Sbjct: 108 D----VRLHHISTDEVYGDLPLTGGERFTPDTPYRPSSPYSASKASADHIVRAFGRSFGL 163 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +SNCSNNYGP PEK IP I + G V LYGDG NVRDW++V+DH A++ +L Sbjct: 164 RATISNCSNNYGPRQHPEKFIPRQILALENGEPVRLYGDGLNVRDWIHVDDHNSAVWAIL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++G IG Y IG N E N ++V D L+ K Y E+I + DRPGHDRRYAID Sbjct: 224 ERGEIGRTYLIGANGELSNREVV-------DELV-KHYPGAEVI-HVTDRPGHDRRYAID 274 Query: 298 SSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 S +++ +GW P+ + GL +T+ WY +N WW Sbjct: 275 PSSVEA-LGWKPRYTSFTEGLAQTIDWYRENRSWW 308 >gi|213964772|ref|ZP_03392971.1| dTDP-glucose 4,6-dehydratase [Corynebacterium amycolatum SK46] gi|213952308|gb|EEB63691.1| dTDP-glucose 4,6-dehydratase [Corynebacterium amycolatum SK46] Length = 330 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 144/338 (42%), Positives = 203/338 (60%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS R L + V V+D TYA N SL+ ++ D+ Sbjct: 1 MRVLVTGGAGFIGSNFVLRTLATRPDVNVTVLDAFTYAANPASLEGAD----CEIIRGDV 56 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E I + F DA+V+FAAESH D S++ A+ F+TTN++GT L + +C + Sbjct: 57 RDAELIDRLVPRF--DAVVHFAAESHNDNSLVDANPFVTTNVLGTVNLAK------ACAT 108 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEV+G L D F+ Y PSSPYSA+KAS+D+ V AW ++G Sbjct: 109 H----EVRLHHISTDEVFGDLALDDPARFTTATAYKPSSPYSASKASADHFVRAWVRSFG 164 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGP PEKLIP I ++ G +YG G+NVRDW++V+DH A++ + Sbjct: 165 LAATISNCSNNYGPRQHPEKLIPRQICGLLRGRSPRVYGTGENVRDWIHVDDHNDAVWAI 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L G +GE Y IG + ER N+D+V +I GF + ++ + + DRPGHDRRY Sbjct: 225 LDAGEVGETYLIGADGERSNLDVVGDILEGF--------GRARSDFVH-VTDRPGHDRRY 275 Query: 295 AIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 AID + I++ +GW P+ ++ SGL +T+ WY N WW Sbjct: 276 AIDPASIRT-LGWQPRYQDFSSGLAETIDWYRANESWW 312 >gi|237753287|ref|ZP_04583767.1| dTDP-glucose 4,6-dehydratase [Helicobacter winghamensis ATCC BAA-430] gi|229375554|gb|EEO25645.1| dTDP-glucose 4,6-dehydratase [Helicobacter winghamensis ATCC BAA-430] Length = 227 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 122/206 (59%), Positives = 156/206 (75%), Gaps = 3/206 (1%) Query: 128 FLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 F ISTDEVYG+L D LF+E+ Y+P SPYSA+KASSD+ V A+ TYG+P+L++NCS Sbjct: 9 FYHISTDEVYGTLKFDNTLFTENTKYDPHSPYSASKASSDHFVRAFYDTYGLPILITNCS 68 Query: 186 NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER 245 NNYGP+ FPEKLIP+AI+ ++ G + +YG G+NVRDWLYVEDHVRA+ LV G+IGE Sbjct: 69 NNYGPFQFPEKLIPVAISNLLNGESIPIYGKGENVRDWLYVEDHVRAIDLVFHCGKIGET 128 Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSSKIKSE 304 YNIGGNNERKNIDI+F I ++D L+ +E LI F+EDR GHD RYAID+SKI+ E Sbjct: 129 YNIGGNNERKNIDIIFLITRIIDELLENPIGTSEKLISFVEDRAGHDLRYAIDASKIREE 188 Query: 305 IGWFPQENMESGLNKTVCWYLDNNWW 330 +GW P +E G+ +T WYL+N W Sbjct: 189 LGWMPLVELEEGIKRTAMWYLENRQW 214 >gi|257077380|ref|ZP_05571741.1| dTDP-glucose 4,6-dehydratase [Ferroplasma acidarmanus fer1] Length = 328 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 202/334 (60%), Gaps = 27/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD- 61 +VTGGAGFIGS YL + + ++ +DKL+Y NLN++ EIS S+ + F++ I D Sbjct: 4 FLVTGGAGFIGSNFINYLHKNYEDYIINLDKLSYGSNLNNI-EIS-SDKYKFIRKSIGDD 61 Query: 62 -RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E I + D I+NFAAESHVDRSI F++ NI G LLE C+ + Sbjct: 62 ITEIIDNT------DYIINFAAESHVDRSIANPQSFVSENINGVLNLLE-------CIRK 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D + I TDE YG + G F E PSSPYSA+KA+S L L++ TYGI + Sbjct: 109 SKNDPV-LINIGTDEEYGDIVNGSFIEQDMLKPSSPYSASKAASSLLALSYFRTYGIKTM 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SNN+G Y FPEKLIP I R + + LYG G+N+RDW+Y ED+VRA+ VL KG Sbjct: 168 VTRTSNNFGKYQFPEKLIPKTIIRNLLNLDIPLYGSGKNIRDWIYTEDNVRAILTVLFKG 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YNI N+E +NIDIV +I D + K ++++ DRPGHD RY+I S K Sbjct: 228 KYGEIYNISSNHELENIDIVEKI---FDLMGKKGN-----LKYVSDRPGHDVRYSIRSDK 279 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +KS +GW P+ L TV WY++N WWRPL Sbjct: 280 LKS-LGWKPEYGFPDALKLTVEWYINNEKWWRPL 312 >gi|13541733|ref|NP_111421.1| dTDP-D-glucose 4,6-dehydratase [Thermoplasma volcanium GSS1] gi|14325139|dbj|BAB60064.1| dTDP-glucose 4,6-dehydratase [Thermoplasma volcanium GSS1] Length = 318 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 23/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L+VTGGAGFIGS Y L + ++ +DKLTYA N + + S S+ + ++ DI Sbjct: 1 MKLLVTGGAGFIGSNFINYWLKKHQRDSIVNVDKLTYAANPDYVDHKSFSDRYELIKADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + I S +K+ D +VNFAAESHVD SI + FI +N +G + +LE R + Sbjct: 61 ANAKQIESIIKDV--DCVVNFAAESHVDNSIKSPEPFIRSNYVGVYNILEAVRKY----- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF QISTDEV+GSL F E PY P +PYSATKA++D LV ++ +TYG Sbjct: 114 -----DIRFHQISTDEVFGSLPLDSSQKFDEHSPYAPRNPYSATKAAADMLVRSYINTYG 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I +SNCSNNYGP EKLIP + I + +YG G+ +RDW++V DH A+ + Sbjct: 169 IKATISNCSNNYGPNQHREKLIPKTVYNAIHNFRIPIYGSGRQIRDWIHVLDHCSAIEAI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++GRIGE Y + NE+ NID+V +I +L LI ++ DRPGHD RYAI Sbjct: 229 LERGRIGETYLVSARNEQHNIDVVKKILGILG-------KDESLIEYVSDRPGHDVRYAI 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D KI++E+ W P + GL TV Y Sbjct: 282 DPKKIENELDWKPSIPFDEGLRDTVNHY 309 >gi|298256349|gb|ADI71458.1| putative sugar 4,6-dehydratase [Amycolatopsis orientalis subsp. vinearia] Length = 327 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 139/336 (41%), Positives = 203/336 (60%), Gaps = 25/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-----KIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR++VTGGAGFIGSA R L+ +V V+D L YAG ++L + F Sbjct: 2 MRILVTGGAGFIGSAYVRGLLAGAYPGTDGARVTVLDNLGYAGRRDNLP--AAHPRLEFA 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D + + + D + +FAAESHVDRS+ A +F+ TN+ GT +L+ Sbjct: 60 EGDVRDTALLAALVPGH--DLVAHFAAESHVDRSLAAAGDFLRTNVEGTGAVLQ------ 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +C R + +STDEVYGS+D G ++ED P P+SPY+A+KA+SD + A+ T+ Sbjct: 112 ACADARVA---RVVHVSTDEVYGSIDDGAWTEDSPLLPNSPYAASKAASDLVARAYWRTH 168 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V ++ C NNYGP PEK+IPL +T ++ V LYGDG+NVR+WL+V+DH RA++ Sbjct: 169 GLDVSITRCCNNYGPRQHPEKVIPLFVTNLLRDRPVPLYGDGRNVREWLHVDDHCRAVHA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR G Y++GG N+++ + L A L+R + DR GHDRRYA Sbjct: 229 VLTGGRAGAVYHVGGGTGLSNLELTRRLLELCGA-------GERLVRRVPDRKGHDRRYA 281 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 +D S+I++E+GW P+ ++GL TV WY +N WW Sbjct: 282 LDDSRIRTELGWAPRVPFDTGLAATVAWYRENPGWW 317 >gi|146304598|ref|YP_001191914.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] gi|145702848|gb|ABP95990.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] Length = 325 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 135/330 (40%), Positives = 201/330 (60%), Gaps = 27/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGG GFIGS R + N + V+V+D + N +L+++ + ++DI D Sbjct: 4 KVLVTGGYGFIGSNFVRMIAN--QADVVVVDNFSVGSNRANLRDVPVKTV----ELDIRD 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +++ +PD I NFAAESHVDRSI+ F++TN++GT LLE R + Sbjct: 58 PRML-DLIRDERPDFIFNFAAESHVDRSIVDPLSFVSTNVLGTANLLEGARRY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 F+QI TDE YG + G F E P NPSSPYSA+KA + L +A+ TY + V + Sbjct: 110 ---DVTFIQIGTDEEYGEIYSGSFRETDPLNPSSPYSASKAGATLLAMAYARTYHLDVRV 166 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +NNYGPY +PEKLIP + R + V +YG G+NVRDW+YV+D+ A+ V +KG+ Sbjct: 167 TRSANNYGPYQYPEKLIPKTVIRALHNLPVPVYGTGKNVRDWIYVQDNCEAILTVAEKGK 226 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G YN+ E+ N+++V I +L LI+F+EDRPGHD RY++DS+K+ Sbjct: 227 PGI-YNVSAGEEKTNLEVVTTILEIL--------GKPNLIKFVEDRPGHDFRYSVDSTKL 277 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + E+GW P+ + G++ TV WY+ N WWW Sbjct: 278 R-ELGWRPRTSFREGISLTVDWYVKNRWWW 306 >gi|42523349|ref|NP_968729.1| dTDP-glucose 4,6-dehydratase [Bdellovibrio bacteriovorus HD100] gi|39575555|emb|CAE79722.1| dTDP-glucose 4,6-dehydratase [Bdellovibrio bacteriovorus HD100] Length = 328 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 136/328 (41%), Positives = 207/328 (63%), Gaps = 22/328 (6%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQ--VLVIDKLTYAGNLNSLK-EISQSNLFSFLQV 57 +++TG AGFIGS + + + +K Q +++D LTYAG L +++ E+ +F++ Sbjct: 5 VLLTGCAGFIGSNFIKTITCRDSIKAQYDFVILDALTYAGRLENIQPELDAHKHLTFVKG 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + +++ ++NFAAESHVDRSI + F+ TN++GT LL+E+ + Sbjct: 65 DIRDTKLVHELFQKYNFSGVLNFAAESHVDRSIENPNIFVETNVLGTLNLLKESLNLF-- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ F++LQ+STDEVYG+L + F+E+ P +P+SPYSA+KAS+D + A+ TY Sbjct: 123 ---EENPAFKYLQVSTDEVYGTLQMEDPAFTEETPISPNSPYSASKASADLMCRAFFETY 179 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV+++ CSNNYGPY EK IPL I R + + +YG G N+RDW+YV+DH ++L Sbjct: 180 KMPVVITRCSNNYGPYQVEEKFIPLMIKRALANEKLPIYGTGMNIRDWIYVDDHNEGVWL 239 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRY 294 KG+ GE YN+GGN+ER+N+D+ +I K E L+ F+ DR GHD RY Sbjct: 240 AFTKGKAGEVYNLGGNSERQNLDVA--------KIILKHLGKPESLLSFVTDRKGHDFRY 291 Query: 295 AIDSSKIKSEIGWFPQENM-ESGLNKTV 321 AI+ SK + E+GW P E GL KT+ Sbjct: 292 AINYSKAQKELGWNPTVRFEEEGLGKTI 319 >gi|312136508|ref|YP_004003845.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] gi|311224227|gb|ADP77083.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] Length = 667 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 171/250 (68%), Gaps = 17/250 (6%) Query: 84 SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-DK 142 +HVDRSI+ F+ TN++GT +LLE R K +F+QISTDEVYG+L D+ Sbjct: 412 THVDRSIMEPGRFVKTNVLGTQVLLESAR---------KYGIEKFIQISTDEVYGTLGDE 462 Query: 143 GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI 202 G F+ED P P+SPY+A+KA +D LV ++ TYG+PV + SNNYGPY FPEK IPL I Sbjct: 463 GYFTEDSPLKPNSPYAASKAGADLLVRSYHKTYGLPVNIVRPSNNYGPYQFPEKFIPLMI 522 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE 262 T +E + +YGDG N+RDWLYV+D +A+ L+L KG+ GE YN+ NNE++NI++V Sbjct: 523 TNALENKPLPIYGDGSNIRDWLYVKDTCKAIDLILHKGKNGEIYNVSANNEKRNIEVV-- 580 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 ++ K LI+F++DRP HD RYA+DSSKIK+E+GW P+ + E GL KT+ Sbjct: 581 -----KLILKKLNKPQSLIKFVKDRPAHDYRYALDSSKIKNELGWKPEYSFEEGLEKTIK 635 Query: 323 WYLDNNWWWR 332 WY++N WW+ Sbjct: 636 WYIENKEWWK 645 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 74/113 (65%), Gaps = 7/113 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS RY+VN + +++ +DKLTY+GNL +LK++ + +SF++ I D Sbjct: 4 ILVTGGAGFIGSNFVRYMVNKYPQYKIINLDKLTYSGNLENLKDVEDAPNYSFVKGCITD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + I+ +++++ D IVNFAAES + +EF+T + G +L +L+ Sbjct: 64 GKLIQKLIEKYECDYIVNFAAES------VAEEEFVTVHWNGEIQVLSMKKLF 110 >gi|229582798|ref|YP_002841197.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|228013514|gb|ACP49275.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] Length = 319 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 143/335 (42%), Positives = 201/335 (60%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGSA R L N KI+ LV D LTYAG L +L + F++ DI Sbjct: 2 MKIMVLGGAGFIGSAFVREL-NSRKIKPLVFDLLTYAGRLENLSGTD----YDFVKGDIR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + F+P+ IVNFAAE+HVDRSI +F+TTNI+GT +LE RL+ Sbjct: 57 DSK-LHDVIASFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ +STDEVYG + E+ P NPSSPYSA+KAS+D LV ++ TY + + Sbjct: 110 ----NFKYVHVSTDEVYG---EECADENSPLNPSSPYSASKASADLLVKSYVRTYNVEAI 162 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW+YVED + + +L K Sbjct: 163 IVRPSNNYGPRQFPEKFIPKTIIRTLLGLHVPIYGDGKQERDWIYVEDTAKIIADLLSKA 222 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YN+ G NI+I+ LL+ ++ + +RF+ DRPGHD+RY + ++ Sbjct: 223 EWKGNVYNLPGGQRVTNIEII----KLLEEIMNRKIE----VRFVSDRPGHDKRYCMINT 274 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ + + GL K WY++N WWW PL Sbjct: 275 KLR-----YTSTTLADGLRKVYEWYVNNRWWWEPL 304 >gi|227829949|ref|YP_002831728.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|229578390|ref|YP_002836788.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|284996980|ref|YP_003418747.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] gi|227456396|gb|ACP35083.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|228009104|gb|ACP44866.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|284444875|gb|ADB86377.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] Length = 318 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/335 (42%), Positives = 201/335 (60%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGSA R L N KI+ LV D LTYAG L +L + F++ DI Sbjct: 1 MKIMVLGGAGFIGSAFVREL-NSRKIKPLVFDLLTYAGRLENLSGTD----YDFVKGDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + F+P+ IVNFAAE+HVDRSI +F+TTNI+GT +LE RL+ Sbjct: 56 DSK-LHDVIASFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLY------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ +STDEVYG + E+ P NPSSPYSA+KAS+D LV ++ TY + + Sbjct: 109 ----NFKYVHVSTDEVYG---EECADENSPLNPSSPYSASKASADLLVKSYVRTYNVEAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW+YVED + + +L K Sbjct: 162 IVRPSNNYGPRQFPEKFIPKTIIRTLLGLHVPIYGDGKQERDWIYVEDTAKIIADLLPKA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YN+ G NI+I+ LL+ ++ + +RF+ DRPGHD+RY + ++ Sbjct: 222 EWKGNVYNLPGGQRVTNIEII----KLLEEIMNRKIE----VRFVSDRPGHDKRYCMINT 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ + + GL K WY++N WWW PL Sbjct: 274 KLR-----YTSTTLADGLRKVYEWYVNNRWWWEPL 303 >gi|227431062|ref|ZP_03913122.1| dTDP-glucose 4,6-dehydratase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353182|gb|EEJ43348.1| dTDP-glucose 4,6-dehydratase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 345 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/347 (41%), Positives = 199/347 (57%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY+V + + V V+DKLTYAGN +L + + + DI D Sbjct: 7 ILVTGGAGFIGANFVRYIVAEHPDVFVTVLDKLTYAGNKENLAGLPAERV-KLVVGDIAD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E DA++++AAESH D S+ F+ TNIIGT+ L+E R Sbjct: 66 APLVDQLVSE--TDAVLHYAAESHNDNSLKDPSPFVQTNIIGTYTLIEAAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASSDY 166 K RF +STDEVYG L ED+P Y PSSPYS+TKASSD Sbjct: 115 -KYNKRFHHVSTDEVYGDLP---LREDLPGHGEGVGEKFTPESQYRPSSPYSSTKASSDL 170 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 L+ AW ++G+ +SN SNNYGPY EK IP +T +I G LYG G+NVRDW++ Sbjct: 171 LIRAWVRSFGLQATISNTSNNYGPYQHIEKFIPRQVTNIISGIKPKLYGSGKNVRDWIHT 230 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L KG+IGE Y +G + E+ NI + L A++ F++D Sbjct: 231 YDHATAVWAILTKGKIGETYLVGADGEKDNISV-------LHAILKDMGKDENDFDFVQD 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R GHD RYAID++KI+ E+GW P+ + +GL T+ WY D+ WW+ Sbjct: 284 RSGHDLRYAIDATKIREELGWEPKYTDFATGLADTIKWYEDHQSWWQ 330 >gi|16082675|gb|AAL14253.1| NDP-hexose 4,6-dehydratase [Streptomyces venezuelae ATCC 10712] Length = 312 Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 200/325 (61%), Gaps = 20/325 (6%) Query: 8 GAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRS 67 G+ ++ S L D V V+DKLTYAGN ++L + +F++ DICD + Sbjct: 3 GSHYVRSLLDGAYGGDGTDTVTVLDKLTYAGNRDNLP--ASHERLTFVRGDICDLPLLLD 60 Query: 68 ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFR 127 L DA+V+FAAESHVDRS+ A EF+ TN++GT +LE + + R Sbjct: 61 LLPGH--DAVVHFAAESHVDRSLESAAEFVRTNVLGTQTVLE---------AALRTGVQR 109 Query: 128 FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNN 187 + +STDEVYG++D+G ++ED P P+SPY+A+KASSD + ++ T+G+ + ++ CSNN Sbjct: 110 LVHVSTDEVYGTIDEGSWTEDFPLLPNSPYAASKASSDLVARSYWRTHGLDLSITRCSNN 169 Query: 188 YGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYN 247 YGPY PEKLIP +T ++EG V +YGDG+NVR+WL+V+DH RA++LVL R Sbjct: 170 YGPYQHPEKLIPRFVTNLLEGHPVPVYGDGRNVREWLHVDDHCRAIHLVLPPAGRARRTT 229 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 NE N+D+ I L A +IR++EDR GHD RY++ +KI+ E+G+ Sbjct: 230 SASGNELTNLDLTERILDLCGA-------DRSMIRYVEDRKGHDLRYSLSDAKIREELGY 282 Query: 308 FPQENMESGLNKTVCWYLDNNWWWR 332 P+ + E GL +TV WY DN WW+ Sbjct: 283 TPRTSFEDGLRRTVDWYRDNPQWWK 307 >gi|330834786|ref|YP_004409514.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] gi|329566925|gb|AEB95030.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] Length = 309 Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 199/332 (59%), Gaps = 36/332 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA R + N + V D LTY+G L +L+ + + F++ DI D+ Sbjct: 2 ILVTGGAGFIGSAFVRVVDNPV-----VYDALTYSGRLENLQGVPHT----FIKGDIRDK 52 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A+K++ D IVNFAAESHVDRSI F+ N+ G LL R Sbjct: 53 EKLEKAIKDYSIDVIVNFAAESHVDRSISDPGAFLV-NVEGVVNLLNICR---------- 101 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K + + + +STDEVYG ++ +ED P NPSSPY+A+KAS D + A+ TYG+ ++ Sbjct: 102 KYKIKLVHVSTDEVYGEMEDS--NEDSPLNPSSPYAASKASGDLFIKAYVRTYGVDAIII 159 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 SNNYGP PEKLIP I R + G + +YGDG VRDW+YVED V+ + ++K G+ Sbjct: 160 RPSNNYGPRQHPEKLIPKTIIRTLLGLEIPIYGDGSQVRDWIYVEDTVKIIKDLMKNGKS 219 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIK 302 GE YNI GN N+++V LI K S +RF++DRPGHDR Y++ SK+K Sbjct: 220 GEIYNIPGNTHITNLELV--------KLIGKIMSKEVKVRFVKDRPGHDRLYSM-KSKLK 270 Query: 303 SEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 E+ +E GL KTV WY+ N WWW+ L Sbjct: 271 YEV-----TPLEEGLRKTVEWYVKNEWWWKGL 297 >gi|256833082|ref|YP_003161809.1| NAD-dependent epimerase/dehydratase [Jonesia denitrificans DSM 20603] gi|256686613|gb|ACV09506.1| NAD-dependent epimerase/dehydratase [Jonesia denitrificans DSM 20603] Length = 341 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/342 (40%), Positives = 203/342 (59%), Gaps = 26/342 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSL-------KEISQSNLF 52 MR++VTGGAGFIG+ +L++ + ++V V+D +T A N+ +E S + F Sbjct: 1 MRVLVTGGAGFIGTNFVLWLLHTVPDVRVTVLDAMTSAVMTNNFIYARRGSREDSVWDHF 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F++ D+ DR+ + +K+ D +V+ AAESH D S+ D F+ TN++GT +LE R Sbjct: 61 EFVRGDVRDRDVLFPLVKD--SDVVVHLAAESHNDWSLENPDLFVDTNVMGTLAVLEAVR 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + R +STDEV+G L D G+F+ PY PSSPYSA+KA +D+LV A Sbjct: 119 HY----------GVRLHHVSTDEVFGDLPLDSGVFTATSPYRPSSPYSASKAGADHLVRA 168 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W ++ +PV LS SNNYGPY EK IP +T ++EG + LYG G +VRDW++V DH Sbjct: 169 WTRSFDLPVTLSIASNNYGPYQHIEKFIPRQVTELLEGRPMRLYGSGVHVRDWIHVSDHC 228 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL+ ++ G +G+ Y IGG E N DI +LD S +E + + DRPGH Sbjct: 229 RALWAIVTGGELGKTYLIGGACEVSNSDIA---ALVLDQGT-WSLPASEAVVHVADRPGH 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D RYA+DS + +E+GW P + G+ T+ WY +N WW+ Sbjct: 285 DVRYALDSRETTAELGWAPNIPLAQGIRDTITWYTNNRAWWQ 326 >gi|226225995|ref|YP_002760101.1| dTDP-glucose 4,6-dehydratase [Gemmatimonas aurantiaca T-27] gi|226089186|dbj|BAH37631.1| dTDP-glucose 4,6-dehydratase [Gemmatimonas aurantiaca T-27] Length = 344 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 143/346 (41%), Positives = 198/346 (57%), Gaps = 25/346 (7%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGF+G+ RY ++V+D LTYAG+ L ++ F+ DICD Sbjct: 1 MLVTGGAGFLGANFVRYWSGQHADDHLVVLDALTYAGDRTRLADLETRGAMEFVVGDICD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R L + + D IV+FAAESHVDRSI+ F+ TN++GT LL+ R W Q+ Sbjct: 61 EVLVRDLLVQHRIDTIVHFAAESHVDRSIVDGGRFVRTNVLGTQALLDAARSVW----QE 116 Query: 122 K---KDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF +STDEVYG L +G F+E PYNPSSPYSA+KA+SD+LV A G T+G Sbjct: 117 RGTWRSGVRFHHVSTDEVYGPLAEGASSFNERSPYNPSSPYSASKAASDHLVRAAGVTHG 176 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P +S+C+NNYGP+ EKLIP + + + G + +YGDG R+WL V DH AL + Sbjct: 177 LPYSISHCANNYGPFQHAEKLIPFMLRQALHGLPLTIYGDGLQRREWLAVHDHCVALDAI 236 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-------------LIPKSY--SHTELI 281 L GE + IGG E N+++V + +LDA L P + S LI Sbjct: 237 LGADVAGETFCIGGGTELTNLELVHRLCGMLDARFAANPALADRFPLCPAALGASSRTLI 296 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + DR GHDRRYA+DSSK+ G P + L + V L + Sbjct: 297 IHVTDRLGHDRRYALDSSKLSVLTGATPGVVFDEALERVVAAVLSD 342 >gi|323474309|gb|ADX84915.1| dTDP-D-glucose 4,6-dehydratase [Sulfolobus islandicus REY15A] Length = 313 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/346 (42%), Positives = 204/346 (58%), Gaps = 41/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAGFIGSA R L N I+ +V+D LTYAG + +LK F++ D+ Sbjct: 1 MKIAVLGGAGFIGSAFVREL-NKRGIKPVVVDLLTYAGRVENLKGTDHE----FIKADVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I LKE D +VNFAAE+HVDRSI +F+TTN++G +LE +RL+ Sbjct: 56 D-QSIYEVLKEV--DVVVNFAAETHVDRSIYKPQDFVTTNVLGVINVLEASRLF------ 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ ISTDEVYG + E+ P NPSSPYSA KAS+D V A+ TY + + Sbjct: 107 ----GFKYVHISTDEVYG---EECADENSPLNPSSPYSAAKASADLFVKAYVRTYNVKAI 159 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP AI R + G HV +YGDG+ RDW++VED R + +L++ Sbjct: 160 IVRPSNNYGPRQFPEKFIPKAIIRTLLGLHVPVYGDGKQERDWIFVEDTARIIADLLERA 219 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNI G N+D++ +G ++ I I+F+ DRPGHDRRY +++S Sbjct: 220 EWKGEVYNIPGKQRVTNLDLLKLLGEVMGKEIK--------IKFVSDRPGHDRRYCMNTS 271 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL-----YKELKP 340 + ++ GL +T WY+ N WWWRPL +KE +P Sbjct: 272 LS------YETTPLKEGLRRTYEWYVSNEWWWRPLIDDKFFKEDEP 311 >gi|332295617|ref|YP_004437540.1| dTDP-glucose 4,6-dehydratase [Thermodesulfobium narugense DSM 14796] gi|332178720|gb|AEE14409.1| dTDP-glucose 4,6-dehydratase [Thermodesulfobium narugense DSM 14796] Length = 331 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/340 (41%), Positives = 204/340 (60%), Gaps = 21/340 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGS R V + +V VIDKLTYAG+++ + + + F + DI Sbjct: 1 MNILITGGAGFIGSEFVRQSV-EKGYKVSVIDKLTYAGSMDRINSVIEE--IRFYKDDIK 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I+ +K + +A++NFAAE+HVDRSIL +EFI TNI GT S L+ Sbjct: 58 NEDSIKKIIKTDKIEAVINFAAETHVDRSILEPNEFINTNICGTT----------SILNS 107 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +STDEVYG L K G FSED P P+SPYSA+KAS+D L+ A+ TY + Sbjct: 108 LANSDVLLVHVSTDEVYGELGKDGKFSEDSPLRPNSPYSASKASADLLINAYARTYSLRT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + SNNYG + FPEKLIP+ I + + V +Y DG N+R+W YV+D A++ VL Sbjct: 168 RIVRPSNNYGMWQFPEKLIPVVIYKALNNQRVPVYADGSNIREWTYVKDCCSAIFKVLND 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ YNIG E N+++V +I +L +LI F++DRPGHD RY++++ Sbjct: 228 GKDSNVYNIGSGEEMTNLNLVKKILSILG-------KSDDLIEFVKDRPGHDFRYSLNTE 280 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 KI E+GW P +++ GL +TV WY++N W LK Sbjct: 281 KISKELGWKPSFSLDQGLKETVQWYVENYAWLEKEVANLK 320 >gi|296141461|ref|YP_003648704.1| dTDP-glucose 4,6-dehydratase [Tsukamurella paurometabola DSM 20162] gi|296029595|gb|ADG80365.1| dTDP-glucose 4,6-dehydratase [Tsukamurella paurometabola DSM 20162] Length = 334 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 143/336 (42%), Positives = 196/336 (58%), Gaps = 26/336 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ R V + V V+D LTYA N +SL ++ + F++ I Sbjct: 1 MQIVVTGGAGFIGANFVRRTVATRPDVAVTVLDALTYAANESSLDDVR--DRVDFVKGSI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + DA++NFAA++H D S+ F+ TNI GT +LL+ R Sbjct: 59 VDPAVVDELVS--SADAVINFAADTHNDNSLSDPWPFLDTNIRGTAVLLDAVR------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R ISTDEV+G L F+ED PY PSSPYSA+KASSD+LV AW ++G Sbjct: 110 ---RHDVRLHHISTDEVFGDLPLDSPERFTEDTPYRPSSPYSASKASSDHLVRAWVRSFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V+DH A++ + Sbjct: 167 VRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGVNVRDWIHVDDHNDAVWAI 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +G IGE Y IG + ER N D+ + +L+ + T+ + DR GHD RYAI Sbjct: 227 LDRGAIGETYLIGADGERSNRDV---LALILEVM----GRPTDDFDHVTDRAGHDLRYAI 279 Query: 297 DSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 DS+KI+ E+ W P + +GL TV WY N WW Sbjct: 280 DSAKIRRELDWEPVHADFAAGLAATVEWYAANRSWW 315 >gi|153217114|ref|ZP_01950878.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 1587] gi|124113860|gb|EAY32680.1| dTDP-glucose 4,6-dehydratase [Vibrio cholerae 1587] Length = 208 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 120/204 (58%), Positives = 151/204 (74%), Gaps = 2/204 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL ++ S ++F Q+DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIIQSTQDSVVNLDKLTYAGNLESLASVAGSERYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + E QPDA+++ AAESHVDRSI G FI TNIIGT+ LLE R +WS L Sbjct: 61 DRAELDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSHLES 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K FRF ISTDEVYG L+ LF+E Y PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ERKAAFRFHHISTDEVYGDLEGTDDLFTETTAYEPSSPYSASKASSDHLVRAWLRTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAI 202 +++NCSNNYGPYHFPEKLIPL I Sbjct: 181 TIVTNCSNNYGPYHFPEKLIPLMI 204 >gi|15807711|ref|NP_285365.1| thymidine diphosphoglucose 4,6-dehydratase [Deinococcus radiodurans R1] gi|6460562|gb|AAF12268.1|AE001862_94 thymidine diphosphoglucose 4,6-dehydratase [Deinococcus radiodurans R1] Length = 364 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 144/337 (42%), Positives = 198/337 (58%), Gaps = 26/337 (7%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGG GFIGS RY L + +V+V DKLTYAG +L ++ + S + DI D Sbjct: 16 LLVTGGCGFIGSNFVRYWLGQHPESKVVVYDKLTYAGRKENLHDLWDNPALSLVVGDIGD 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R +E D IVNFAAE+HVD+SILG F TN+ GT +LLE R Sbjct: 76 MDLVRRTCQENDVDLIVNFAAETHVDQSILGPLVFTETNVRGTHVLLEVAR--------- 126 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R ISTDEVYG + G S E P SPY+A+KA++D LV A+ TYGIPV Sbjct: 127 -ELGIRLHHISTDEVYGHIKDGHQSVETDELAPRSPYAASKAAADQLVQAYAITYGIPVT 185 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +NN GPY +PEK +PL T I G + +YGDGQ +RD+ +V DH + VL +G Sbjct: 186 ITRGANNVGPYQYPEKAVPLFSTNAILGEPLPVYGDGQQMRDYAHVYDHCTGIETVLLRG 245 Query: 241 RIGERYNIGGNNERKN---IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 IGE YN+G E N +DIV E + K +S L++ + DRPGHDRRY+++ Sbjct: 246 NIGEVYNVGTGREMTNLEMVDIVLET-------LGKDHS---LVKHVTDRPGHDRRYSMN 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++S +GW P+ + + + + WY N WWW P+ Sbjct: 296 VDKLRS-LGWQPKYDPKQAVAEAARWYEGNRWWWEPI 331 >gi|238619096|ref|YP_002913921.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] gi|238380165|gb|ACR41253.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] Length = 318 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 201/335 (60%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGSA R L N KI+ LV D LTYAG L +L + F++ DI Sbjct: 1 MKIMVLGGAGFIGSAFVREL-NSRKIKPLVFDLLTYAGRLENLSGTD----YDFVKGDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + F+P+ IVNFAAE+HVDRSI +F+TTNI+GT +LE RL+ Sbjct: 56 DSK-LHDVIASFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLY------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ +STDEVYG + E+ P NPSSPYSA+KAS+D LV ++ TY + + Sbjct: 109 ----NFKYVHVSTDEVYG---EECADENSPLNPSSPYSASKASADLLVKSYVRTYNVEAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW+YVED + + +L K Sbjct: 162 IVRPSNNYGPRQFPEKFIPKTIIRTLLGLHVPIYGDGKQERDWIYVEDTAKIIADLLSKA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YN+ G + NI+I+ LL+ ++ + +RF+ DRPGHD+RY + ++ Sbjct: 222 EWKGNVYNLPGGQKVTNIEII----KLLEEIMNRKIE----VRFVSDRPGHDKRYCMINT 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ + + GL K WY++N WWW L Sbjct: 274 KLR-----YTSTTLADGLRKVYEWYINNRWWWESL 303 >gi|269219080|ref|ZP_06162934.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211227|gb|EEZ77567.1| dTDP-glucose 4,6-dehydratase [Actinomyces sp. oral taxon 848 str. F0332] Length = 330 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 149/344 (43%), Positives = 201/344 (58%), Gaps = 27/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGFIG+ V + V+V+DKLTYAGN S++ + + L + DI Sbjct: 1 MRVLITGGAGFIGANFVHSTVESMPDADVVVLDKLTYAGNPKSIEGLDRVEL---VVGDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +K+ D +VNFAAESH D S+ FI TNI GTF LLE R Sbjct: 58 ADPDTVDPLVKD--ADVVVNFAAESHNDNSLNDPSPFIRTNIEGTFRLLEAVR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT---KASSDYLVLAWGHTYG 176 + RF ISTDEVYG L+ G MP +P +P S K +SD LV AW ++G Sbjct: 109 ---RHGTRFHHISTDEVYGDLEIGESRRFMPGDPYAPSSPYSSSKGASDLLVRAWVRSFG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P +SNCSNNYGPY EK IP IT MI+G +YG G+ VRDW++V DH A++ + Sbjct: 166 VPATISNCSNNYGPYQHVEKFIPRTITNMIDGIRPRVYGTGEQVRDWIHVRDHNTAVWEI 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + KGRIGE Y IG + E+ N+++V I P + H + DRPGHD+RYAI Sbjct: 226 IDKGRIGETYLIGADGEKNNLEVVQMI-LAEFGREPDDFDH------VNDRPGHDQRYAI 278 Query: 297 DSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D+SK+ E GW P + +GL+ TV WY N WWRP +++ Sbjct: 279 DNSKLVEETGWSPSFADFAAGLHDTVEWYKANEDWWRPQKDDVE 322 >gi|238063662|ref|ZP_04608371.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. ATCC 39149] gi|237885473|gb|EEP74301.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. ATCC 39149] Length = 332 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 198/336 (58%), Gaps = 26/336 (7%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIG+ R L +++ V+D LTYAGN SL E++ + +F++ D+ D Sbjct: 4 LLVTGGAGFIGANFVRRALAARPGLRLTVLDALTYAGNRASLAEVA--DRIAFVRGDVRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + +++ D +V+FAAESHVD S+ F+ TN+ GTF+LLE R Sbjct: 62 VDLVDALVQDC--DTVVHFAAESHVDNSLQDPTPFLRTNVEGTFVLLEAVR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R +STDEV+GSL G F+E+ Y+PSSPYSATKA+SD LV AW +YG+ Sbjct: 111 -RHDRRLHHVSTDEVFGSLPLHGGGAFTEETRYDPSSPYSATKAASDLLVRAWARSYGLR 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 LSNC+NNYGPY EK +P IT ++ G LYG G NVR+W +V+DH A+ L+L Sbjct: 170 ATLSNCANNYGPYQNVEKFLPRQITNVLRGQRPKLYGTGANVREWTHVDDHNDAVLLILD 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +GE Y IG + N L L + R + DRP HD RYA DS Sbjct: 230 AGVLGETYLIGSGAQWSN------RALLELTLTLLGRPADDFDR-VPDRPAHDLRYACDS 282 Query: 299 SKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRP 333 SKI+ E+GW P+ ++ GL T+ WY N WWW P Sbjct: 283 SKIRRELGWRPRHPDLAEGLVVTIDWYRHNEWWWGP 318 >gi|227826953|ref|YP_002828732.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|229584124|ref|YP_002842625.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] gi|227458748|gb|ACP37434.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|228019173|gb|ACP54580.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] Length = 318 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 200/335 (59%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGSA R L N KI+ LV D LTYAG L +L + F++ DI Sbjct: 1 MKIMVLGGAGFIGSAFVREL-NSRKIKPLVFDLLTYAGRLENLSGTD----YDFVKGDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + F+P+ IVNFAAE+HVDRSI +F+TTNI+GT +LE RL+ Sbjct: 56 DSK-LHDVIASFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLY------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ +STDEVYG + E+ P NPSSPYSA+KAS+D LV ++ TY + + Sbjct: 109 ----NFKYVHVSTDEVYG---EECADENSPLNPSSPYSASKASADLLVKSYVRTYNVEAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW+YVED + + +L K Sbjct: 162 IVRPSNNYGPRQFPEKFIPKTIIRTLLGLHVPIYGDGKQERDWIYVEDTAKIIADLLSKA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YN+ G NI+I+ LL+ ++ + +RF+ DRPGHD+RY + ++ Sbjct: 222 EWKGNVYNLPGGQRVTNIEII----KLLEEIMNRKIE----VRFVSDRPGHDKRYCMINT 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ + + GL K WY++N WWW L Sbjct: 274 KLR-----YTSTTLADGLRKVYEWYINNRWWWESL 303 >gi|294624018|ref|ZP_06702789.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601683|gb|EFF45649.1| dTDP-glucose 4,6-dehydratase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 224 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 119/206 (57%), Positives = 151/206 (73%), Gaps = 3/206 (1%) Query: 128 FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 L +STDEVYGSL + G F+E PY P+SPYSA+KA+SD+LV A+ HTYG+PVL +NCSN Sbjct: 1 MLHVSTDEVYGSLGENGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSN 60 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 NYGPYHFPEKLIPL I + + + +YGDG+ VRDWL+V DH A+ VL+KGR+GE Y Sbjct: 61 NYGPYHFPEKLIPLVIAKALASEPLPIYGDGKQVRDWLFVSDHCDAIRTVLEKGRVGETY 120 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 N+GGN ER+NI++V I LLD L P++ I + DRPGHDRRYAID+SK+++E Sbjct: 121 NVGGNAERQNIEVVHTICTLLDQLRPRADGQPRASQITHVADRPGHDRRYAIDASKLRNE 180 Query: 305 IGWFPQENMESGLNKTVCWYLDNNWW 330 +GW P E G+ TV WYLDN W Sbjct: 181 LGWQPAYRFEQGIALTVQWYLDNQDW 206 >gi|206890353|ref|YP_002249086.1| dTDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742291|gb|ACI21348.1| dTDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 330 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 141/348 (40%), Positives = 210/348 (60%), Gaps = 30/348 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS R L +V V+DKLTYAG++ LK I + F VDI Sbjct: 1 MKVLVTGGAGFIGSDFVR-LAARKGWKVTVVDKLTYAGDMERLKPIQ--DRLDFYNVDIL 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +R ++ +P+A+++FAAE+++DRS++ F+ TNIIGT LLE L++ Sbjct: 58 DKEELRKIFEKQKPEAVLHFAAETNIDRSVIEPSVFMETNIIGTIYLLE--------LAK 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + +F+ I++ E YG + +G ED P NP SPY+ +KAS+D L + +PV+ Sbjct: 110 ELGVE-KFINITSYEEYGDIKEGERDEDCPLNPRSPYAVSKASADMLGQVYWRALKLPVI 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + YGP+ PE+LIP+ I + + + ++G G +R+WLY+ D +RA++ +L+KG Sbjct: 169 TVRLCSIYGPWQNPERLIPMTILKALRNEMIPIHGTGDIIREWLYLCDCIRAVFALLEKG 228 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 + GE YN+G K IDIV +I +LD P++ LI+F+ DRPGH++R+AI S K Sbjct: 229 KPGEVYNVGSGERFKVIDIVKQILKILDK--PEN-----LIKFVSDRPGHEKRFAISSEK 281 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWW-----------WRPLYKE 337 IKS GW P ESGL T+ W L+N W W LYKE Sbjct: 282 IKSTTGWSPTTKFESGLKSTIEWNLNNRTWLFKKLFYYEDLWSRLYKE 329 >gi|241895949|ref|ZP_04783245.1| dTDP-glucose 4,6-dehydratase [Weissella paramesenteroides ATCC 33313] gi|241870992|gb|EER74743.1| dTDP-glucose 4,6-dehydratase [Weissella paramesenteroides ATCC 33313] Length = 339 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 204/337 (60%), Gaps = 28/337 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIG+ RY++ + +++ V+DKLTYAGN +L ++ + + + DI D Sbjct: 7 ILVTGGAGFIGTNFVRYVITEHPDVKLTVLDKLTYAGNAENLADLPDDRV-TLIVGDIND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++E DA+V+FAAESH D S+ F+ TN++GTF L+E R + Sbjct: 66 AQLVDKLMRE--TDAVVHFAAESHNDNSLTDPSPFMQTNLMGTFTLIEAARRY------- 116 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMP----YNPSSPYSATKASSDYLVLAWGHTY 175 RF +STDEVYG L D+ +E YNPSSPYSATKA SD LV AW ++ Sbjct: 117 ---DVRFHHVSTDEVYGDLPLDETSRNEKFTPLSRYNPSSPYSATKAGSDLLVRAWVRSF 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ +SN SNNYGPY EK IP IT ++ G +YG+G+N+RDW++V DHV ++ Sbjct: 174 GLKATISNTSNNYGPYQHIEKFIPRQITNIMSGIKPKIYGNGRNIRDWIHVTDHVAGIWE 233 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L G IGE Y +G N E+ N+ ++ +I L A+ + F++DR GHD RYA Sbjct: 234 ILMHGTIGETYLLGANGEQDNLTVLKKI---LQAM----GKPVDDFEFVKDRAGHDLRYA 286 Query: 296 IDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWW 331 ID+++ + + W P+ + ++GL +T+ WY N WW Sbjct: 287 IDATRTQETLNWQPKYLDFDAGLKQTIDWYQQNQAWW 323 >gi|297243858|ref|ZP_06927788.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis AMD] gi|296888279|gb|EFH27021.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis AMD] Length = 363 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 148/358 (41%), Positives = 213/358 (59%), Gaps = 37/358 (10%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 ++VTGGAGFIGS Y+ + + V V+D LTYAGN+ +L ++ Q +N ++F++ Sbjct: 15 HILVTGGAGFIGSNFVHYIAKHHTTVAVTVLDLLTYAGNMANLYDLPQDFANNRYAFIRG 74 Query: 58 DICDRECIRSALKEFQP------------DAIVNFAAESHVDRSILGADEFITTNIIGTF 105 DI D + L P DAIVNFAAESH D +I +D FI+TNI+GT Sbjct: 75 DIRDENIVDQLLDPHNPIKTAEGTTLPAIDAIVNFAAESHNDNAIEFSDPFISTNILGTH 134 Query: 106 ILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGS--LDKGL-FSEDMPYNPSSPYSATKA 162 L++ K RF Q+STDEVYG +D L F E PY PSSPYSA+KA Sbjct: 135 TLIKFAH----------KYNIRFHQVSTDEVYGDFPIDSVLKFDESSPYCPSSPYSASKA 184 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 + D LV AW TYG+ +SN SNNYGP EK IP IT ++ LYG G ++RD Sbjct: 185 AGDLLVKAWCRTYGLRATISNSSNNYGPRQHIEKFIPRQITNIMCNMPAKLYGVGDSIRD 244 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 W++VED+ A++ VL +G IGE YNIG N E NI+I+ + L+ +P++ I Sbjct: 245 WIHVEDNCDAIWHVLTRGTIGETYNIGANCEVNNINILRILMQLMG--VPETN-----IA 297 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++ R G DRRYA+D++KI++++ W P+ N++ GL +T+ WY + W+P+ +++ Sbjct: 298 YVNPRIGEDRRYALDTTKIRTQLKWEPKYNNLKQGLQETISWYDSHADLWKPIKAQVE 355 >gi|227827278|ref|YP_002829057.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|227459073|gb|ACP37759.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] Length = 316 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 145/346 (41%), Positives = 203/346 (58%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAGFIGSA R L N I+ +VID LTYAG + +LK+ F++ DI Sbjct: 1 MKIAVLGGAGFIGSAFVREL-NKRGIRPIVIDLLTYAGRVENLKDTDHE----FVKADIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E + + ++NFAAESHVDRSI +F+TTN++GT +LE R + Sbjct: 56 DQK-LHDILREHKVEVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRF------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F ++ ISTDEVYG + E P NPSSPYSA+KAS+D V A+ TY + + Sbjct: 109 ----NFNYVHISTDEVYG---EECGDESSPLNPSSPYSASKASADLFVKAYVRTYDVKAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNN+GP FPEK +P AI R + G HV +YGDG+ RDW++VED R + +L + Sbjct: 162 IVRPSNNFGPRQFPEKFVPKAIIRTLLGLHVPIYGDGKQERDWIFVEDTARIIADLLDRA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNI G N+++V L+ + I+F+ DRPGHDRRY +++S Sbjct: 222 EWRGEIYNITGKQRFTNLELV--------KLLSEVMGKEVRIKFVADRPGHDRRYCMNTS 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL-----YKELKP 340 + ++ GL KT WYL+N WWWRPL +KE +P Sbjct: 274 LS------YQVTPLKDGLRKTYEWYLENEWWWRPLINDKFFKEDEP 313 >gi|283783621|ref|YP_003374375.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis 409-05] gi|283441204|gb|ADB13670.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis 409-05] Length = 363 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 147/358 (41%), Positives = 213/358 (59%), Gaps = 37/358 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 ++VTGGAGFIGS Y+ + + V V+D LTYAGN+ +L ++ Q +N ++F++ Sbjct: 15 HILVTGGAGFIGSNFVHYIAKYHVTVAVTVLDLLTYAGNMANLYDLPQDFANNRYAFIRG 74 Query: 58 DICDRECIRSALKEFQP------------DAIVNFAAESHVDRSILGADEFITTNIIGTF 105 DI D + L P DAIVNFAAESH D +I +D FI+TNI+GT Sbjct: 75 DIRDENIVDQLLDPHNPIKTAEGTTLPAIDAIVNFAAESHNDNAIEFSDPFISTNILGTH 134 Query: 106 ILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGS--LDKGL-FSEDMPYNPSSPYSATKA 162 L++ K RF Q+STDE+YG +D L F E PY PSSPYSA+KA Sbjct: 135 TLIKFAH----------KYNIRFHQVSTDEIYGDFPIDSVLKFDESSPYCPSSPYSASKA 184 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 + D LV AW TYG+ +SN SNNYGP EK IP IT ++ LYG G ++RD Sbjct: 185 AGDLLVKAWCRTYGLRATISNSSNNYGPRQHIEKFIPRQITNIMCNMPAKLYGVGDSIRD 244 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 W++VED+ A++ VL +G IGE YNIG N E NI+I+ + L+ +P++ I Sbjct: 245 WIHVEDNCDAIWHVLTRGTIGETYNIGANCEVNNINILRILMQLMG--VPETN-----IA 297 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++ R G DRRYA+D++KI++++ W P+ N++ GL +T+ WY + W+P+ +++ Sbjct: 298 YVNPRIGEDRRYALDTTKIRTQLKWEPKYNNLKQGLQETISWYGSHADLWKPIKAQVE 355 >gi|302868487|ref|YP_003837124.1| dTDP-glucose 4,6-dehydratase [Micromonospora aurantiaca ATCC 27029] gi|315505137|ref|YP_004084024.1| dtdp-glucose 4,6-dehydratase [Micromonospora sp. L5] gi|302571346|gb|ADL47548.1| dTDP-glucose 4,6-dehydratase [Micromonospora aurantiaca ATCC 27029] gi|315411756|gb|ADU09873.1| dTDP-glucose 4,6-dehydratase [Micromonospora sp. L5] Length = 329 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 140/336 (41%), Positives = 198/336 (58%), Gaps = 26/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIG+ ++ +++++D LTYAGN +SL+ I F+ D+ D Sbjct: 1 MLITGGAGFIGANFAHHVRRCHPGYRIILLDALTYAGNRSSLRPILDH--IEFVHGDVRD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + D +V+FAAESHVD S+L F+ TN++GTF LLE R + Sbjct: 59 AEVLDRLVA--ASDTVVHFAAESHVDNSLLDPAPFVQTNLVGTFNLLEAVRRY------- 109 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R ISTDEV+G L F+E Y+PSSPY+ATKA SD LV AW +YG+ Sbjct: 110 ---DRRLHHISTDEVFGDLPLDSDERFTELSRYDPSSPYAATKAGSDMLVRAWVRSYGVR 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +SNC+NNYGPY EK IP IT ++ G +YG G NVR+W +V+DH A+ +L+ Sbjct: 167 ATISNCANNYGPYQHVEKFIPRQITNVLAGDRPKVYGRGDNVREWTHVDDHNTAIDAILR 226 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE Y +G E N IV L+ L+ + +L + DRPGHD RYA DS Sbjct: 227 SGRMGETYLVGSGQECDNRQIV----RLILELMGRPADDFDL---VTDRPGHDARYANDS 279 Query: 299 SKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 K+++E+GW P+ ++ +GL T+ WY N WWW+P Sbjct: 280 DKLRTELGWKPRYADLSAGLAGTIDWYRRNGWWWKP 315 >gi|255521990|ref|ZP_05389227.1| hypothetical protein LmonocFSL_12342 [Listeria monocytogenes FSL J1-175] Length = 268 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 128/265 (48%), Positives = 185/265 (69%), Gaps = 11/265 (4%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHIFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD + ++ + + + D IVNFAAESHVDRSI+ FI TN+ GT LL + Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ Sbjct: 114 --ELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLN 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ CSNNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ Sbjct: 172 VNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIH 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEI 263 G+ GE YN+GG+NER N +IV I Sbjct: 232 NGKSGEVYNVGGHNERTNNEIVHII 256 >gi|284997400|ref|YP_003419167.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] gi|284445295|gb|ADB86797.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] Length = 313 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 149/346 (43%), Positives = 203/346 (58%), Gaps = 41/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAGFIGSA R L N I+ +VID LTYAG L +LK F++ D+ Sbjct: 1 MKIAVLGGAGFIGSAFVREL-NKRGIKPIVIDLLTYAGRLENLKGTDHE----FIKADVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+K D +VNFAAE+HVDRSI +F+TTN++G +LE +RL+ Sbjct: 56 D-QSIHEAIKGV--DLVVNFAAETHVDRSIYKPQDFVTTNVLGVINVLEASRLY------ 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ ISTDEVYG + E P NPSSPYSA KAS+D V A+ TY + + Sbjct: 107 ----GFKYVHISTDEVYG---EECADESSPLNPSSPYSAAKASADLFVKAYVRTYNVKAI 159 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP AI R + G HV +YGDG+ RDW++VED R + +L + Sbjct: 160 IVRPSNNYGPRQFPEKFIPKAIIRTLLGLHVPVYGDGKAERDWIFVEDTARIIAGLLDRA 219 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNI G N++++ LL ++ K I+F+ DRPGHDRRY +++S Sbjct: 220 EWKGEVYNIPGKQRVTNLELI----KLLSEVMGKEIR----IKFVSDRPGHDRRYCMNTS 271 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL-----YKELKP 340 + ++ GL +T WYL+N WWWRPL +KE +P Sbjct: 272 LS------YETTPLKDGLRRTYEWYLENEWWWRPLIADKFFKEDEP 311 >gi|8133009|gb|AAF73454.1|AF264025_5 putative dTDP-glucose 4, 6-dehydratase [Streptomyces galilaeus] Length = 323 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 140/333 (42%), Positives = 205/333 (61%), Gaps = 25/333 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MR+++TGGAGFIGS R L+ +V V+D LTYAG+ +L ++ L F Sbjct: 1 MRVLITGGAGFIGSHYVRSLLAGTLPGPRPSRVTVVDLLTYAGDTGNLP-LADPRL-DFR 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + + + + DA+V+FAAE+HVDRS+ EF+ TN++GT LLE + Sbjct: 59 RLDIRDLDALLTVVPGH--DAVVHFAAETHVDRSLSEPAEFVRTNVLGTQSLLEASL--- 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F+ +STDEVYGS+ +G ++E+ P P+SPY+A+KA SD + ++ T+ Sbjct: 114 ------RGGVGTFVHVSTDEVYGSIAQGTWTEEAPLLPNSPYAASKAGSDLVARSYWRTH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V + C+NNYGP PEKLIPL +T ++ G V LYGDG NVR+WL+V+DH RA++ Sbjct: 168 GLDVRTTRCANNYGPRQHPEKLIPLFVTELLAGRPVPLYGDGGNVREWLHVDDHCRAVHA 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 VL GR GE YNIGG N ++ + L AL +S +R + DR GHD RYA Sbjct: 228 VLTGGRPGEIYNIGGGTHLTNREMTAK----LLALCGTDWSR---VRQVPDRKGHDLRYA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D +KI+ E+G+ P +++ GL + V WY D Sbjct: 281 VDDTKIREELGYRPLRSLDDGLREVVDWYRDRQ 313 >gi|298252920|ref|ZP_06976714.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis 5-1] gi|297533284|gb|EFH72168.1| dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis 5-1] Length = 363 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 147/358 (41%), Positives = 213/358 (59%), Gaps = 37/358 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQV 57 ++VTGGAGFIGS Y+ + + V V+D LTYAGN+ +L ++ Q +N ++F++ Sbjct: 15 HILVTGGAGFIGSNFVHYIAKYHVTVAVTVLDLLTYAGNMANLYDLPQDFANNRYAFIRG 74 Query: 58 DICDRECIRSALKEFQP------------DAIVNFAAESHVDRSILGADEFITTNIIGTF 105 DI D + L P DAIVNFAAESH D +I +D FI+TNI+GT Sbjct: 75 DIRDENIVDQLLDPHNPIKTAEGTTLPAIDAIVNFAAESHNDNAIEFSDPFISTNILGTH 134 Query: 106 ILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGS--LDKGL-FSEDMPYNPSSPYSATKA 162 L++ K RF Q+STDE+YG +D L F E PY PSSPYSA+KA Sbjct: 135 TLIKFAH----------KYNIRFHQVSTDEIYGDFPIDSVLKFDESSPYCPSSPYSASKA 184 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 + D LV AW TYG+ +SN SNNYGP EK IP IT ++ LYG G ++RD Sbjct: 185 AGDLLVKAWCRTYGLRATISNSSNNYGPRQHIEKFIPRQITNIMCNMPAKLYGVGDSIRD 244 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 W++VED+ A++ VL +G IGE YNIG N E NI+I+ + L+ +P+S I Sbjct: 245 WIHVEDNCDAIWHVLTRGTIGETYNIGANCEVNNINILRILMQLMG--VPESN-----IT 297 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++ R G DRRYA+D++KI++++ W P+ +N++ L +T+ WY + W+P+ +++ Sbjct: 298 YVNPRIGEDRRYALDTTKIRTQLKWEPKHDNLKQELQETISWYDSHTDLWKPIKAQVE 355 >gi|229584492|ref|YP_002842993.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] gi|228019541|gb|ACP54948.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] Length = 316 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 145/346 (41%), Positives = 204/346 (58%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAGFIGSA R L N I+ +VID LTYAG + +LK+ F++ DI Sbjct: 1 MKIAVLGGAGFIGSAFVREL-NKRGIRPIVIDLLTYAGRVENLKDTDHE----FIKADIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E + + ++NFAAESHVDRSI +F+TTN++GT +LE R + Sbjct: 56 DQK-LHDILREHKVEVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRF------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F ++ ISTDEVYG + ED P NPSSPYSA+KAS+D V ++ TY + + Sbjct: 109 ----NFNYVHISTDEVYG---EECGDEDSPLNPSSPYSASKASADLFVKSYVRTYDVKAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNN+GP FPEKLIP AI R G HV +YGDG+ RDW++VED R + ++ K Sbjct: 162 IVRPSNNFGPRQFPEKLIPKAIIRTFLGLHVPIYGDGKQERDWIFVEDTARIIADLIDKA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 E YNI G N+++V L+ + I+F+ +RPGHDRRY ++ + Sbjct: 222 EWRREVYNIPGKQRVSNLELV--------KLLSEVMGKEVRIKFVSNRPGHDRRYCMN-T 272 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL-----YKELKP 340 K+ E+ ++ GL KT WY+ N WWWRPL +KE +P Sbjct: 273 KLSYEVT-----PLKEGLRKTYEWYISNEWWWRPLIDDKFFKEDEP 313 >gi|300215156|gb|ADJ79572.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius CECT 5713] Length = 343 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 206/347 (59%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + Q + + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLPQDRV-ELVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + ++ DA+V++AAESH D S+ D FI TNI+GT +L+E +C D Sbjct: 64 KELVDKLVQ--NADAVVHYAAESHNDNSLRNPDPFIQTNIVGTSVLIE------ACTKYD 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP---------------YSATKASSDY 166 RF +STDEVYG L ED+P + P YS++KASSD Sbjct: 116 ----VRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTPESPYKPSSPYSSSKASSDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 169 LVRAWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L +G+IGE Y IG + E+ N + V E+ L +Y ++D Sbjct: 229 NDHSSAVWKILNEGKIGETYLIGADGEKNNKE-VLELILKLMGQSADAYDQ------VKD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAID+SK+++E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 282 RPGHDLRYAIDASKLRNELGWEPQYTNFEEGLKATIDWYTNHREWWQ 328 >gi|229008636|ref|ZP_04166048.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides Rock1-4] gi|228752641|gb|EEM02257.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides Rock1-4] Length = 254 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 135/267 (50%), Positives = 184/267 (68%), Gaps = 17/267 (6%) Query: 69 LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRF 128 +++++ D+IV+FAAESHVDRSI G EF TTNI+GT +LLE + + RF Sbjct: 1 MQDYKIDSIVHFAAESHVDRSIQGPMEFYTTNIVGTAVLLEAAKTFGIQ---------RF 51 Query: 129 LQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNN 187 L ISTDEVYGSL + G F+E+ P +P+SPYS++KASSD + L++ TY +PV+++ CSNN Sbjct: 52 LHISTDEVYGSLGETGHFTEETPISPNSPYSSSKASSDLIALSYFETYKLPVIVTRCSNN 111 Query: 188 YGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYN 247 YGPY +PEKLIPL IT + + +YG GQNVRDWL+V DH A+ LVL G+ GE YN Sbjct: 112 YGPYQYPEKLIPLMITNAMGDKELPVYGTGQNVRDWLHVFDHCTAIDLVLHNGKDGEIYN 171 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 +GGNNE++N++IV + ++ K +I F+ DR GHD RYAIDSSK++ E+GW Sbjct: 172 VGGNNEKRNVEIV-------EMILEKLGKSKSMISFVPDRLGHDWRYAIDSSKLQRELGW 224 Query: 308 FPQENMESGLNKTVCWYLDNNWWWRPL 334 P + GL T+ WY +N WW+PL Sbjct: 225 KPVYSFTEGLEDTIEWYKENEQWWKPL 251 >gi|323476570|gb|ADX81808.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus HVE10/4] Length = 318 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 141/335 (42%), Positives = 199/335 (59%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGSA R L N KI+ LV D LTYA L +L + F++ DI Sbjct: 1 MKIMVLGGAGFIGSAFVREL-NSRKIKPLVFDLLTYACRLENLSGTD----YDFVKGDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + F+P+ IVNFAAE+HVDRSI +F+TTNI+GT +LE RL+ Sbjct: 56 DSK-LHDVIASFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLY------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+++ +STDEVYG + E+ P NPSSPYSA+KAS+D LV ++ TY + + Sbjct: 109 ----NFKYVHVSTDEVYG---EECADENSPLNPSSPYSASKASADLLVKSYVRTYNVEAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW+YVED + + +L K Sbjct: 162 IVRPSNNYGPRQFPEKFIPKTIIRTLLGLHVPIYGDGKQERDWIYVEDTAKIIADLLSKA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YN+ G NI+I+ LL+ ++ + +RF+ DRPGHD+RY + ++ Sbjct: 222 EWKGNVYNLPGGQRVTNIEII----KLLEEIMNRKIE----VRFVSDRPGHDKRYCMINT 273 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K++ + + GL K WY++N WWW L Sbjct: 274 KLR-----YTSTTLADGLRKVYEWYINNRWWWESL 303 >gi|297205908|ref|ZP_06923303.1| dTDP glucose 4,6-dehydratase [Lactobacillus jensenii JV-V16] gi|297149034|gb|EFH29332.1| dTDP glucose 4,6-dehydratase [Lactobacillus jensenii JV-V16] Length = 343 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 154/343 (44%), Positives = 207/343 (60%), Gaps = 34/343 (9%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+V N + V V+DKLTYAGN +L + S+ + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVKNHPDVFVTVLDKLTYAGNKENLAGLP-SDRVKLVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + ++ + DA+V++AAESH D S+L + FI TNI+GT +L+ +C D Sbjct: 64 KELVDELVQ--KADAVVHYAAESHNDNSLLNPEPFIQTNIVGTSVLIS------ACAKYD 115 Query: 122 KKDQFRFLQISTDEVYGSLD------------KGLFSEDMPYNPSSPYSATKASSDYLVL 169 RF ISTDEVYG L F+ DM YNPSSPYS++KASSD LV Sbjct: 116 ----VRFHHISTDEVYGDLPLRDDLPGHGEGPGEKFTPDMRYNPSSPYSSSKASSDLLVR 171 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ DH Sbjct: 172 AWVRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHTNDH 231 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A++ +L +G+IGE Y IG + E+ N + V E+ L +Y + DRPG Sbjct: 232 SSAVWKILTEGKIGETYLIGADGEKNNKE-VLELILKLMGQPSDAYDQ------VRDRPG 284 Query: 290 HDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 HD RYAIDSSK+++E+GW P+ N E GL T+ WY ++ WW Sbjct: 285 HDLRYAIDSSKLRNELGWEPRYTNFEEGLQSTIDWYTNHRDWW 327 >gi|227891400|ref|ZP_04009205.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius ATCC 11741] gi|227866789|gb|EEJ74210.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius ATCC 11741] Length = 343 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 206/347 (59%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + Q + + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLPQDRV-ELVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + ++ DA+V++AAESH D S+ D FI TNI+GT +L+E +C D Sbjct: 64 KELVDKLVQ--NADAVVHYAAESHNDNSLRNPDPFIQTNIVGTSVLIE------ACTKYD 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP---------------YSATKASSDY 166 RF +STDEVYG L ED+P + P YS++KASSD Sbjct: 116 ----VRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTPESPYKPSSPYSSSKASSDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 169 LVRAWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L +G+IGE Y IG + E+ N + V E+ L +Y ++D Sbjct: 229 NDHSSAVWKILNEGKIGETYLIGADGEKNNKE-VLELILKLMGQPADAYDQ------VKD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAID+SK+++E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 282 RPGHDLRYAIDASKLRNELGWEPQYTNFEEGLKATIDWYTNHREWWQ 328 >gi|229578477|ref|YP_002836875.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|229582930|ref|YP_002841329.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|228009191|gb|ACP44953.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|228013646|gb|ACP49407.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] Length = 316 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 143/346 (41%), Positives = 205/346 (59%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAGFIGSA R L N I+ +VID LTYAG + +LK+ F++ DI Sbjct: 1 MKIAVLGGAGFIGSAFVREL-NKRGIRPIVIDLLTYAGRVENLKDTDHE----FIKADIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E + + ++NFAAESHVDRSI +F+TTN++GT +LE R + Sbjct: 56 DQK-LHDILREHKVEVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRF------ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F ++ ISTDEVYG + E+ P NPSSPYSA+KAS+D V ++ TY + + Sbjct: 109 ----NFNYVHISTDEVYG---EECGDENSPLNPSSPYSASKASADLFVKSYVRTYNVKAI 161 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + SNNYGP FPEK IP I R + G HV +YGDG+ RDW++VED R + +L + Sbjct: 162 IVRPSNNYGPRQFPEKFIPKIIIRTLLGLHVPIYGDGKQERDWIFVEDTARIIVDLLDEA 221 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GE YNI N+++V + ++D + I+F+ DRPGHDRRY + S+ Sbjct: 222 EWRGEVYNIPRRQRVSNLELVKLLSEVMDKEVK--------IKFVSDRPGHDRRYCM-ST 272 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL-----YKELKP 340 ++ E+ ++ GL +T WY+ N WWWRPL +KE +P Sbjct: 273 RLSYEVT-----PLKEGLRRTYEWYISNEWWWRPLIDDKFFKEDEP 313 >gi|161527637|ref|YP_001581463.1| dTDP-glucose 4,6-dehydratase [Nitrosopumilus maritimus SCM1] gi|160338938|gb|ABX12025.1| dTDP-glucose 4,6-dehydratase [Nitrosopumilus maritimus SCM1] Length = 329 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 145/350 (41%), Positives = 215/350 (61%), Gaps = 22/350 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGG GFIGS +N+ ++ +D + N +L I + N + F++ DI Sbjct: 1 MKILVTGGLGFIGSNFIINYLNEFPEHTIINLDNENHGANHQNLISIQKKNNYEFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + +++ + DAIVNFAAESHVDRSI A FI +NI+G F +LE + Sbjct: 61 TNHKLMKNLIS--ISDAIVNFAAESHVDRSISDATPFINSNILGVFTILEILK------- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ + R +QISTDEV+GSL K +E+ NPSSPYS++KAS++ LV ++ TY I Sbjct: 112 --KEKEKRLVQISTDEVFGSLKKNSANENFKLNPSSPYSSSKASAELLVNSYFVTYEIDT 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ C+NNYGP FPEKLIP I ++ + +YG+G+N+RDW++V+DH A+ VL K Sbjct: 170 VITRCTNNYGPRQFPEKLIPKTILLAMQKQKIPIYGNGKNIRDWIHVDDHCNAVKEVLHK 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G+ GE YNI NE NI IV I + K + + + F+EDRPGHD RY++DSS Sbjct: 230 GKSGESYNISAQNELDNIQIVTNI-------LEKMGLNDDYLEFVEDRPGHDFRYSLDSS 282 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKN 349 KI++E+ W + + E G+ KT+ WY+ N W + KE+ +KW N Sbjct: 283 KIRNELKWKEETSFEDGIEKTIDWYVKNQEWCNGINKEILKK---AKWNN 329 >gi|301299649|ref|ZP_07205906.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852743|gb|EFK80370.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 343 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 206/347 (59%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + + + + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLPEDRV-ELVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + ++ DA+V++AAESH D S+ D FI TNI+GT +L+E +C D Sbjct: 64 KELVDKLVQ--NADAVVHYAAESHNDNSLRNPDPFIQTNIVGTSVLIE------ACTKYD 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP---------------YSATKASSDY 166 RF +STDEVYG L ED+P + P YS++KASSD Sbjct: 116 ----VRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTPESPYKPSSPYSSSKASSDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 169 LVRAWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L +G+IGE Y IG + E+ N + V E+ L +Y ++D Sbjct: 229 NDHSSAVWKILNEGKIGETYLIGADGEKNNKE-VLELILKLMGQPADAYDQ------VKD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAID+SK+++E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 282 RPGHDLRYAIDASKLRNELGWEPQYTNFEEGLKATIDWYTNHREWWQ 328 >gi|289803936|ref|ZP_06534565.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 200 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 115/186 (61%), Positives = 142/186 (76%), Gaps = 4/186 (2%) Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF 212 PSSPYSA+KASSD+LV AW TYG+P L++NCSNNYGPYHFPEKLIPL I + G + Sbjct: 1 PSSPYSASKASSDHLVRAWLRTYGLPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLP 60 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG+GQ +RDWLYVEDH RALY V+ G +GE YNIGG+NERKN+D+V I LL+ L P Sbjct: 61 VYGNGQQIRDWLYVEDHARALYHVVTNGAVGETYNIGGHNERKNLDVVRTICALLEELAP 120 Query: 273 KS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + ++ +LI F++DRPGHD RYAID+SKI E+GW PQE ESG+ KTV WYL N Sbjct: 121 QKPQGVANYHDLITFVDDRPGHDLRYAIDASKIARELGWTPQETFESGMRKTVQWYLANE 180 Query: 329 WWWRPL 334 WW+P+ Sbjct: 181 AWWKPV 186 >gi|90962541|ref|YP_536457.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius UCC118] gi|90821735|gb|ABE00374.1| dTDP-glucose 4,6-dehydratase [Lactobacillus salivarius UCC118] Length = 343 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 147/347 (42%), Positives = 203/347 (58%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + Q + + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLPQDRV-ELVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + ++ DA+V++AAESH D S+ D FI TNI+GT +L+E +C D Sbjct: 64 KELVDKLVQ--NADAVVHYAAESHNDNSLRNPDPFIQTNIVGTSVLIE------ACTKYD 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS------DY 166 RF +STDEVYG L ED+P + P SPY + S D Sbjct: 116 ----VRFHHVSTDEVYGDLP---LREDLPGHGEGRGEKFTPESPYKPSSPYSSSKASSDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 169 LVRAWVRSFGLKATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L +G+IGE Y IG + E+ N + V E+ L +Y ++D Sbjct: 229 NDHSSAVWKILNEGKIGETYLIGADGEKNNKE-VLELILKLMGQPADAYDQ------VKD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAID+SK+++E+GW PQ N E GL T+ WY ++ WW+ Sbjct: 282 RPGHDLRYAIDASKLRNELGWEPQYTNFEEGLKATIDWYTNHREWWQ 328 >gi|226357061|ref|YP_002786801.1| dTDP-glucose 4,6-dehydratase [Deinococcus deserti VCD115] gi|226319051|gb|ACO47047.1| putative dTDP-glucose 4,6-dehydratase [Deinococcus deserti VCD115] Length = 341 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 137/336 (40%), Positives = 197/336 (58%), Gaps = 20/336 (5%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L++TGG GFIGS RY L + + +++V DKLTYAG +L ++ S S +Q DI Sbjct: 1 MNLLITGGCGFIGSNFVRYWLESHPRDRIVVYDKLTYAGRRENLHDLWDSPRLSLVQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + R A E Q D IVNFAAE+HVD+SILG F TN+ GT +LLE R Sbjct: 61 ADMDAARRACCENQIDLIVNFAAETHVDQSILGPLIFTDTNVRGTHVLLEVAR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R ISTDEVYG + G S E P P SPY+A+KA++D LV A+ TY +P Sbjct: 114 ---ELGIRMHHISTDEVYGHIPDGHQSVETDPLAPRSPYAASKAAADQLVQAYYITYSLP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ +NN GP+ +PEK++PL T + G + +YGDG +RD+ +V DH + VL Sbjct: 171 VTITRGANNVGPFQYPEKVVPLFATNAVLGEALPVYGDGLQMRDYAHVYDHCTGIETVLL 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G IG+ YN+G E N+++V +L+ L LI+ + DRPGHDRRY+++ Sbjct: 231 RGEIGQVYNVGTGREMTNLEMV---NIVLETL----GQDRSLIQHVTDRPGHDRRYSMNV 283 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K+++ + W P+ + + + WY N WW P+ Sbjct: 284 DKLRA-LSWEPKYDPWQAVTEATRWYAQNRAWWEPI 318 >gi|295839165|ref|ZP_06826098.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB74] gi|197695616|gb|EDY42549.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. SPB74] Length = 328 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 201/326 (61%), Gaps = 25/326 (7%) Query: 4 IVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++TGGAGFIGS R L+ +V V+D LTYAGN ++L ++ S L F ++D Sbjct: 1 MITGGAGFIGSHYVRSLLAGELPGPRPDRVTVVDLLTYAGNTDNLP-LADSRL-DFRKLD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+ + + L DA+V+FAAE+HVDRS+ A F+ TN++GT LLE + +C Sbjct: 59 ICEHDALLKVLPGH--DAVVHFAAETHVDRSLTNAAAFVRTNVLGTQSLLEAS---LAC- 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 F+ +STDEVYGS+ +G ++E+ P P+SPY+A+KA SD + ++ T+G+ Sbjct: 113 -----GVATFVHVSTDEVYGSITEGTWTENEPLLPNSPYAASKAGSDLVARSYWRTHGLD 167 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V ++ C+NNYGP PEKLIP +T ++ G V LYG G +VR+WL+V+DH R ++ VL Sbjct: 168 VRVTRCANNYGPRQHPEKLIPHFVTELLAGRSVPLYGGGAHVREWLHVDDHCRGVHAVLT 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR G+ YNIGG N ++ + L A + +R + DR GHD RYA+D Sbjct: 228 GGRAGQVYNIGGGTHLTNREMTARLLELCGADWSR-------VRRVPDRKGHDLRYAVDD 280 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 SKI+ E+G+ P+ +++ GL + V WY Sbjct: 281 SKIRRELGYRPRWSLDEGLREVVDWY 306 >gi|315231841|ref|YP_004072277.1| dTDP-glucose 4,6-dehydratase [Thermococcus barophilus MP] gi|315184869|gb|ADT85054.1| dTDP-glucose 4,6-dehydratase [Thermococcus barophilus MP] Length = 696 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/257 (46%), Positives = 161/257 (62%), Gaps = 15/257 (5%) Query: 81 AAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL 140 A +HVDRSI FI +N++G + +LE R + + R + + TDEVYG + Sbjct: 443 AHNTHVDRSISNPYAFIESNVLGVYTILEAIRKY--------NPEVRLVHVGTDEVYGDI 494 Query: 141 DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPL 200 +G F+E+ PSSPYSA+KA+ D LVL + TY + ++ C+NNYGPY FPEKLIP Sbjct: 495 IEGSFTEEDRLMPSSPYSASKAAGDMLVLGYARTYNLNASITRCTNNYGPYQFPEKLIPK 554 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 I R G + +YG GQNVRDWLYV DH A+ LVL+KG E YNI E+ N+++V Sbjct: 555 TIIRASMGLKIPIYGTGQNVRDWLYVTDHCEAVELVLEKGEKREVYNISAGEEKTNLEVV 614 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 I L+ +LI F+EDRPGHD RY++DS+KI+ ++GW P+ N + G+ KT Sbjct: 615 KTILKLMG-------KDEDLIEFVEDRPGHDLRYSLDSTKIREQLGWKPKHNFKEGIKKT 667 Query: 321 VCWYLDNNWWWRPLYKE 337 V WYL N WWWRPL E Sbjct: 668 VEWYLSNEWWWRPLVDE 684 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 9/109 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS RY++ K +V+ +DKL Y L +LK+I ++F++ DI Sbjct: 1 MRVLVTGGAGFIGSNFIRYILEKHKDWEVINLDKLGYGSKLANLKDIENDPRYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL 108 D E ++ +K+ DA+VNFAAES + +EF+ + G L+ Sbjct: 61 NDFELVKGIIKKV--DAVVNFAAES------VAENEFVAIHRHGRIRLV 101 >gi|172039918|ref|YP_001799632.1| dTDP-glucose-4,6-dehydratase [Corynebacterium urealyticum DSM 7109] gi|171851222|emb|CAQ04198.1| dTDP-glucose-4,6-dehydratase [Corynebacterium urealyticum DSM 7109] Length = 367 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 137/348 (39%), Positives = 198/348 (56%), Gaps = 37/348 (10%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-------FSF 54 ++VTGGAGFIG+ R L + V ++D +TYA N +L+ + L F F Sbjct: 19 VLVTGGAGFIGANFVHRTLATRPDVHVHIVDAMTYAANPLNLRTTDGTPLEQAYPGRFRF 78 Query: 55 LQVDICDRECIRSALKEFQ---PD----AIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 Q+D+ DRE + + + E PD AIV+FAAESH D S+L F+ +N+ GT L Sbjct: 79 TQLDLADREAVLALVDEVAAEVPDVDGLAIVHFAAESHNDNSLLDPALFVRSNVDGTVHL 138 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASS 164 E + +STDEV+G L D F+ PY PSSPYSA+KA++ Sbjct: 139 AEAA----------VRHGIYLHHVSTDEVFGDLELDDPQRFTPTTPYQPSSPYSASKAAA 188 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D++V A+ + G+ +SNCSNNYGP PEK IP IT +++G LYG G NVRDW+ Sbjct: 189 DHMVRAFVRSLGLKATISNCSNNYGPRQHPEKFIPRQITGLLQGQRPRLYGKGDNVRDWI 248 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +V+DH A++ ++++G +G+ Y IG + ER N+ +V AL+ + ++ Sbjct: 249 HVDDHNDAVWAIMERGELGQTYLIGADGERNNLQVV-------RALLVAFGREPDDFDWV 301 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 DRPGHDRRYAID S ++ +GW P+ + +GL T+ WY DN WW Sbjct: 302 SDRPGHDRRYAIDPSSMEG-LGWQPRYTDFAAGLMATIDWYRDNQQWW 348 >gi|237786451|ref|YP_002907156.1| dTDP-glucose-4,6-dehydratase [Corynebacterium kroppenstedtii DSM 44385] gi|237759363|gb|ACR18613.1| dTDP-glucose-4,6-dehydratase [Corynebacterium kroppenstedtii DSM 44385] Length = 352 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 140/349 (40%), Positives = 200/349 (57%), Gaps = 39/349 (11%) Query: 3 LIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQ-----------SN 50 ++VTGGAGFIGS Y + ++V+V+D LTYAGN SLK + S+ Sbjct: 4 VLVTGGAGFIGSNFVHYTRAHYPDVKVVVLDALTYAGNPESLKPDANLAGAGSATSPDSD 63 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L + D+CD+ + ++ D +V+FAAESH D S+ F+ TNI GT + Sbjct: 64 LCELVVGDVCDQPLVDKLVE--SADQVVHFAAESHNDNSLREPAPFLRTNIEGTVTVAS- 120 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYL 167 +C+ D ISTDEV+G L G F+E PY PSSPYSA+KAS+D++ Sbjct: 121 -----ACVKYD----VPLHHISTDEVFGDLPIGSDERFTESSPYRPSSPYSASKASADHI 171 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V AW ++G+ +SNCSNNYGP PEKLIP I +I G +YG G+NVRDW++V+ Sbjct: 172 VRAWVRSFGLKATISNCSNNYGPRQHPEKLIPRQIIGLIGGRRPRVYGTGENVRDWIHVD 231 Query: 228 DHVRALYLVLKKGR-----IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 DH A++ ++ R G + IG + ER N++IV G LL+A + + Sbjct: 232 DHNSAVWTIIDAARRDPALYGRTFLIGADGERSNLEIV---GDLLEAF---GRPRDDFV- 284 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + DRPGHDRRYAID +++++E+GW P + GL +T+ WY + WW Sbjct: 285 HVTDRPGHDRRYAIDPTQLRTELGWEPTHFLADGLRETIEWYRSHRTWW 333 >gi|1588470|prf||2208414C glucose phosphate thymidylate transferase Length = 291 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/306 (44%), Positives = 183/306 (59%), Gaps = 19/306 (6%) Query: 30 VIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRS 89 ++D LTYAGN +L + F+F+ DICD + + E D IV+FAAESHVDRS Sbjct: 1 LLDSLTYAGNPANLDPVRGDERFAFVHGDICDAPLVDRLVAEH--DQIVHFAAESHVDRS 58 Query: 90 IL-GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED 148 + G N++GT LL+ + L + F+ ISTDEVYGS+D G +E Sbjct: 59 VRSGPRSSCAPNVMGTQTLLD------AALRHAPR---IFVHISTDEVYGSVDVGASTET 109 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 P +PSS Y+ TKASSD L L++ T+G+ V ++ CSNNYG + PEK+IP +T ++ G Sbjct: 110 DPLHPSSAYAGTKASSDLLALSYHRTHGLDVRITRCSNNYGTHQHPEKVIPRFVTTLLSG 169 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 V LYGDG N+R+WL+VEDHV A+ LV + G GE YNIGG E N ++ LLD Sbjct: 170 GRVPLYGDGGNLRNWLHVEDHVDAVELVREGGSPGEIYNIGGGTELSNKELT---ALLLD 226 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 A + + EL + DR GHDRRYA+D KI + +G+ P+ + L +TV WY D Sbjct: 227 A-VGAGWDSVEL---VADRKGHDRRYAVDHGKITALLGYRPRRDFRDSLAETVAWYRDRR 282 Query: 329 WWWRPL 334 WW PL Sbjct: 283 SWWAPL 288 >gi|297570677|ref|YP_003696451.1| dTDP-glucose 4,6-dehydratase [Arcanobacterium haemolyticum DSM 20595] gi|296931024|gb|ADH91832.1| dTDP-glucose 4,6-dehydratase [Arcanobacterium haemolyticum DSM 20595] Length = 330 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/349 (41%), Positives = 202/349 (57%), Gaps = 37/349 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIG+ V + V+V+DKLTYAGN S+ + + L ++ DI Sbjct: 1 MKVLVTGGAGFIGANFVHQTVETMPDADVVVLDKLTYAGNPASIAGLDRVTL---VEGDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +K+ D +VNFAAESH D S+ FI +NI+GTF LLE R Sbjct: 58 ADRDTVDPLVKD--ADVVVNFAAESHNDNSLNDPSPFIRSNIVGTFELLEAVR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPY------SATKASSDYLVLAWGH 173 + RF ISTDEVYG L+ E + P Y S++KA+SD+LV AW Sbjct: 109 ---RHGTRFHHISTDEVYGDLE---IDEPRRFQPGDAYVPSSPYSSSKAASDHLVRAWVR 162 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++GI +SNCSNNYGPY EK IP IT +++G +YG G+ +RDW++V DH A+ Sbjct: 163 SFGIEATISNCSNNYGPYQHVEKFIPRTITNLMDGIRPRIYGTGEQIRDWIHVRDHNTAV 222 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ KGR+GE Y IG + E N+ + I F DA + H + DRPGHD Sbjct: 223 WAIINKGRLGETYLIGADGELNNLQVTQMILEEFGRDA---GDFDH------VNDRPGHD 273 Query: 292 RRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 +RYAID+SK+ E GW P +N GL+ T+ WY N WWRP + ++ Sbjct: 274 QRYAIDNSKLVEETGWEPSFKNFRDGLHNTIEWYKTNEAWWRPAKEAVE 322 >gi|316997102|dbj|BAJ52690.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces sp. TA-0256] Length = 347 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 136/351 (38%), Positives = 190/351 (54%), Gaps = 23/351 (6%) Query: 3 LIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG AGFIG+ Y V+ +D LTYAGN +L + F+ DI D Sbjct: 10 VLVTGAAGFIGANFVHYWRAAHPGDTVVALDALTYAGNEENLATVRDG--IVFVHADIAD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L+E + + +VNFAAESH ++L F TN++GT LLE + Sbjct: 68 GARMSRVLREHRVEVVVNFAAESHNSLAVLDPARFFRTNVLGTQALLE---------ASL 118 Query: 122 KKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF IST EVYG L F ED Y P +PY+A+KA +D+ V A+ T+G+P Sbjct: 119 RAGVERFHHISTCEVYGDLALDSPDAFREDRAYRPRTPYNASKAGADHAVRAYHETFGLP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L+NC+NNYGPY FPEK+IPL +T + G + +Y + R+W++V+DH RA+ VL Sbjct: 179 VTLTNCANNYGPYQFPEKVIPLFVTNALLGRPLPVYASRDHRREWIHVDDHCRAIDAVLT 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G G Y++G E DI + L + +P S T + DRPGHDRRY +DS Sbjct: 239 GGEPGRTYHVGSGVEASVQDIADAV--LAELGLPASLQTT-----VADRPGHDRRYLLDS 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKN 349 I+ +GW P GL +T+ WY N WW PL E +P + S W+ Sbjct: 292 GLIRRTLGWRPTVEFAEGLARTIRWYRSNPTWWEPLL-ERRPVTEESVWQQ 341 >gi|68536982|ref|YP_251687.1| dTDP-glucose-4,6-dehydratase [Corynebacterium jeikeium K411] gi|68264581|emb|CAI38069.1| dTDP-glucose-4,6-dehydratase [Corynebacterium jeikeium K411] Length = 378 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 147/365 (40%), Positives = 199/365 (54%), Gaps = 55/365 (15%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLK-------EISQSNLFSF 54 ++VTGGAGFIG+ R L ++VL+ D LTYA N +L+ E++ F Sbjct: 7 VLVTGGAGFIGANFVHRTLETRPDVKVLIFDALTYAANPLNLQTEDGTPLEVAYPGRVEF 66 Query: 55 LQVDICDRECIRSAL---------------------KEFQPD--AIVNFAAESHVDRSIL 91 ++ D+ D R AL ++F D AIV+FAAESH D S+ Sbjct: 67 IEGDVADASAFREALERAITLTEAAGDAGNKGAAEPQQFAADRVAIVHFAAESHNDNSLA 126 Query: 92 GADEFITTNIIGTFILLEETRLWWSCLSQDKKD-QFRFLQISTDEVYGSL---DKGLFSE 147 F +N+ GT ++Q D R ISTDEV+G L D F+ Sbjct: 127 TPAIFARSNVEGTL-----------NVAQAAADLGVRLHHISTDEVFGDLALDDPNRFTV 175 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 D PYNPSSPYSA+KA++D+ V A+ + G+ +SNCSNNYGP PEK IP IT +IE Sbjct: 176 DTPYNPSSPYSASKAAADHFVRAFVRSRGLKATISNCSNNYGPRQHPEKFIPRQITGLIE 235 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G LYG G+NVRDW++V+DH A++ +L G++GE Y IG ER N+ +V ++ L Sbjct: 236 GHRPRLYGSGENVRDWIHVDDHNDAVWAILDSGKLGETYLIGAEGERSNLQVVRDL-LEL 294 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLD 326 + H + DRPGHDRRYAID S I +E+GW P+ + SGL +TV WY Sbjct: 295 FGRPADDFVH------VTDRPGHDRRYAIDPSSI-AELGWQPRFTDFASGLAETVEWYRR 347 Query: 327 NNWWW 331 N WW Sbjct: 348 NEKWW 352 >gi|184154574|ref|YP_001842914.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] gi|183225918|dbj|BAG26434.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] gi|299782752|gb|ADJ40750.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum CECT 5716] Length = 343 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 145/346 (41%), Positives = 203/346 (58%), Gaps = 40/346 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +IVTGGAGFIGS Y+VN+ ++ V V+DKLTYAGN +L + + + + DICD Sbjct: 5 IIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNRANLAGLPEDRV-ELVVGDICD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + +K+ DA+V++AAESH D S+ + FI TNI+GT +L+ R Sbjct: 64 KELVDRLVKD--ADAVVHYAAESHNDNSLENPEPFIQTNIVGTSVLINACR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS------DY 166 K RF ISTDEVYG L ED+P + P SPY + S D Sbjct: 113 -KYDVRFHHISTDEVYGDLP---LREDLPGHGEGKGEKFTPESPYRPSSPYSSSKASSDL 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 169 LVRAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGSGKNVRDWIHT 228 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH RA++ +L KG+IGE Y IG N E+ N + V E+ L +Y ++D Sbjct: 229 NDHSRAVWDILTKGKIGETYLIGANGEKNNKE-VLEMILELMGQPKDAYDQ------VKD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 RPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW Sbjct: 282 RPGHDLRYAIDATKLRTELGWEPEFTDFKTGLKNTIDWYTEHRDWW 327 >gi|15615926|ref|NP_244230.1| spore coat polysaccharide synthesis (dTDP glucose 4, 6-dehydratase) [Bacillus halodurans C-125] gi|10175987|dbj|BAB07083.1| spore coat polysaccharide synthesis (dTDP glucose 4, 6-dehydratase) [Bacillus halodurans C-125] Length = 321 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 189/328 (57%), Gaps = 24/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIGS L+ + +D LTYAG + ++ ++ + F+ DI Sbjct: 4 QILVTGGAGFIGSHFIEALLQHKPTYHITNVDVLTYAGKIENMSGFTKHPNYRFISADIG 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + A D IV+FAAE+HVDRSI F+ TNI+GT LL L+ Sbjct: 64 DADQLLGAFDRTY-DVIVHFAAETHVDRSIHNPMVFLETNILGTHNLL---------LAV 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + L ISTDEVYGSL G+ F+E P ++PYSA+KA D L ++ TY Sbjct: 114 LKGYAKKILYISTDEVYGSL--GMKDVPFTEQSPLAANNPYSASKAGGDLLARSFYKTYQ 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+++ CSNNYGP EKLIP I + + LYGDG +RDWLYV DH RAL + Sbjct: 172 APVIITRCSNNYGPRQDKEKLIPKIIANALTNKKIPLYGDGLQIRDWLYVTDHCRALTTI 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ G IGE YNIGG NER N++I +I +L +LI +EDR GHDRRYAI Sbjct: 232 MEHGEIGEIYNIGGGNERTNLEITKQILNILG-------KDHDLINHVEDRKGHDRRYAI 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + KI ++GW P E GL +TV WY Sbjct: 285 NWGKIHKQLGWRPMVAFEDGLAETVQWY 312 >gi|260579327|ref|ZP_05847209.1| dTDP-glucose 4,6-dehydratase [Corynebacterium jeikeium ATCC 43734] gi|258602456|gb|EEW15751.1| dTDP-glucose 4,6-dehydratase [Corynebacterium jeikeium ATCC 43734] Length = 366 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 146/351 (41%), Positives = 197/351 (56%), Gaps = 41/351 (11%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLK-------EISQSNLFSF 54 ++VTGGAGFIG+ R L ++VL+ D LTYA N +L+ E + F Sbjct: 9 VLVTGGAGFIGANFVHRTLETRPDVKVLIYDALTYAANPLNLRTDDGTPLEEAYPGRMEF 68 Query: 55 LQVDICDRECIRSALK-------EFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTF 105 ++ D+ D R AL+ + D AIV+FAAESH D S+ F +N+ GT Sbjct: 69 IEGDVADASAFREALERAIAVTEQSAADRVAIVHFAAESHNDNSLATPAIFARSNVEGTL 128 Query: 106 ILLEETRLWWSCLSQDKKD-QFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATK 161 ++Q D R ISTDEV+G L D F+ D PYNPSSPYSA+K Sbjct: 129 -----------NVAQAAADLGVRLHHISTDEVFGDLALDDPNRFTVDTPYNPSSPYSASK 177 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 A++D+ V A+ + G+ +SNCSNNYGP PEK IP IT +IEG LYG G+NVR Sbjct: 178 AAADHFVRAFVRSRGLKATISNCSNNYGPRQHPEKFIPRQITGLIEGHRPRLYGSGENVR 237 Query: 222 DWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 DW++V+DH A++ +L G++GE Y IG ER N+ +V ++ L + H Sbjct: 238 DWIHVDDHNDAVWAILDSGKLGETYLIGAEGERSNLQVVRDL-LELFGRPADDFVH---- 292 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 + DRPGHDRRYAID S I +E+GW P+ + SGL +TV WY N WW Sbjct: 293 --VTDRPGHDRRYAIDPSSI-AELGWQPRFTDFASGLAETVEWYRRNEKWW 340 >gi|70607433|ref|YP_256303.1| NAD-dependent epimerase/dehydratase protein [Sulfolobus acidocaldarius DSM 639] gi|68568081|gb|AAY81010.1| NAD-dependent epimerase/dehydratase protein [Sulfolobus acidocaldarius DSM 639] Length = 309 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 136/331 (41%), Positives = 195/331 (58%), Gaps = 34/331 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS+ R + + ++ D LTYAG L +L + F++ DI + Sbjct: 1 MVTGGAGFIGSSFSREVK-----KPVIFDLLTYAGRLENLIGVDHI----FVKGDIRNYS 51 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +K++ IVNF+AE+HVDRSI A F+ TN+ G LLE R + Sbjct: 52 QLEDTVKKYDIKIIVNFSAETHVDRSINNAHIFLDTNVYGVVNLLEICRRY--------- 102 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R +QISTDEVYG + +ED P PSSPYSA+KAS+D +LA+ TYG+ ++ Sbjct: 103 -DTRLVQISTDEVYGEQENA--TEDFPLRPSSPYSASKASADMFILAYVRTYGVDAIIIR 159 Query: 184 CSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIG 243 SNNYGP EKLIP I R + G + +YG G RDW+YVED + + +++ G+ G Sbjct: 160 PSNNYGPRQHIEKLIPKTIVRTLLGLEIPIYGKGDQERDWIYVEDTAKVIAQLVETGKKG 219 Query: 244 ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKS 303 E YN+ G NI +V IG L+ PK I+F++DRPGHD++Y++ S+K+ Sbjct: 220 EIYNVPGGQRTTNIKLVEMIGELM-GREPK-------IKFVKDRPGHDKKYSMVSTKLSY 271 Query: 304 EIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ++ ++ GL+KT+ WYL+N WWWRPL Sbjct: 272 KV-----TPLKEGLSKTIKWYLENEWWWRPL 297 >gi|254556201|ref|YP_003062618.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum JDM1] gi|254045128|gb|ACT61921.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum JDM1] Length = 342 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 150/347 (43%), Positives = 207/347 (59%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y+ N ++Q+ V+DKLTYAGN +L+EI + + DICD Sbjct: 4 LLVTGGAGFIGSNFVHYVYNHHPEVQITVLDKLTYAGNRANLEEI-LGDRVKLVVGDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ Q DA+V++AAESH D S+ FI TNIIGT+ L++ Sbjct: 63 APLVDELMQ--QTDAVVHYAAESHNDNSLKDPWPFIETNIIGTYTLIQSAH--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSS------PYSATKASSDY 166 K RF +STDEVYG L ED+P + P+S PYS++KASSD Sbjct: 112 -KFNKRFHHVSTDEVYGDLP---LREDLPGHGEGVGEKFTPTSRYKPSSPYSSSKASSDL 167 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY + EK IP IT ++ G LYG G+NVRDW++ Sbjct: 168 LVRAWVRSFGLQATISNCSNNYGPYQYIEKFIPRQITNILSGIRPKLYGSGKNVRDWIHT 227 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L KG+IGE Y IG + E N D++ I L+ PK + ++D Sbjct: 228 NDHSAAVWDILTKGKIGETYLIGADGEMNNKDVLEMILELMGQ--PK-----DAYDVVKD 280 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAIDS+K+++E+GW P+ + SGL T+ WY D+ WW+ Sbjct: 281 RPGHDLRYAIDSTKLRTELGWQPEFTDFRSGLKATIDWYTDHQDWWQ 327 >gi|167957191|ref|ZP_02544265.1| putative dTDP-glucose-4,6-dehydratase [candidate division TM7 single-cell isolate TM7c] Length = 298 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 134/303 (44%), Positives = 180/303 (59%), Gaps = 28/303 (9%) Query: 38 GNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 GN +L+ ++ +F++ DICD E + + E D IV+FAAESH D S+ F+ Sbjct: 1 GNRANLQPVADQ--INFVEGDICDAELMDKLVAE--NDIIVHFAAESHNDNSLRNPWPFV 56 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPS 154 TN++GT+ +LE R K R ISTDEV+G L D F+ED PYNPS Sbjct: 57 ETNVVGTYTILEAIR----------KHGKRLHHISTDEVFGDLELDDPNRFTEDTPYNPS 106 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 SPYS+TKASSD LV AW ++GI +SNCSNNYGPY EK IP IT ++ LY Sbjct: 107 SPYSSTKASSDMLVRAWIRSFGIKATISNCSNNYGPYQHIEKFIPRQITNILSNIKPKLY 166 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G G+ VRDW++V DH A++L+L+KG +GE Y IG +N+ N +V E+ L Sbjct: 167 GTGEQVRDWIHVNDHNAAVHLILEKGELGETYIIGADNDHVNNKMVIELICELMGKGKDW 226 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-----QENMESGLNKTVCWYLDNNW 329 Y H + DRPGHD RYA+DSSK++ E+GW P Q M GL +T+ WY ++ Sbjct: 227 YEH------VNDRPGHDMRYAMDSSKLRRELGWQPEYTDNQTGMRDGLMQTIEWYREHED 280 Query: 330 WWR 332 WW+ Sbjct: 281 WWK 283 >gi|296163869|ref|ZP_06846532.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] gi|295885887|gb|EFG65842.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] Length = 209 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/208 (56%), Positives = 146/208 (70%), Gaps = 6/208 (2%) Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 FSE PY P+SPYSATKA SD+LV A+ HTYG+PVL +NCSNNYGPY FPEKLIPL I Sbjct: 2 FSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPVLTTNCSNNYGPYQFPEKLIPLMIAS 61 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 + G + +YGDGQNVRDWLYV DH A+ VL +G GE YN+GG NE+KN+++V + Sbjct: 62 ALAGKALPVYGDGQNVRDWLYVGDHCSAIREVLARGTPGETYNVGGWNEKKNLEVVHTLC 121 Query: 265 FLLDALIPKS-YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 LLD L PK+ S+ + I +++DRPGHDRRYAID+ K++ E+GW P E E+GL KTV W Sbjct: 122 DLLDRLRPKAGASYHDQITYVKDRPGHDRRYAIDARKLERELGWKPAETFETGLAKTVQW 181 Query: 324 YLDNNWWWRPLYKELKPDNDYSKWKNLN 351 YLDN W + +Y KW N Sbjct: 182 YLDNQAW-----SDEVASGEYRKWVETN 204 >gi|333029025|ref|ZP_08457088.1| putative NAD-dependent epimerase/dehydratase [Streptomyces sp. Tu6071] gi|332742233|gb|EGJ72675.1| putative NAD-dependent epimerase/dehydratase [Streptomyces sp. Tu6071] Length = 342 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 129/339 (38%), Positives = 204/339 (60%), Gaps = 18/339 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + L+ + +V V+D LTYAG++ +L S+ F+ ++ D Sbjct: 4 VLVTGGAGFIGSHFVKRLITAEDVARVTVLDALTYAGHVENLGTAFFSDKLRFVHGNVQD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + P A+V+FAAESHV RS A EF++TN +GT +L++ + Sbjct: 64 ADLVNDVMAS-GPTAVVHFAAESHVGRSYGAAREFLSTNALGTQVLVD---------AAH 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +F+ +STDEVYG L +G +E PS PY+ +KA+ D + L T G+PV + Sbjct: 114 RHTIGKFVHVSTDEVYGPLVQGSATEQAALRPSVPYAVSKAAGDLVALGAYQTLGLPVCV 173 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + SNNYGPY +PEK+IPL +TR++ G V L+ GQ+VR+WL+VED+ + VL+ G+ Sbjct: 174 TRSSNNYGPYQYPEKIIPLFLTRLLRGMPVTLHDRGQHVRNWLHVEDNCAGIEAVLRDGK 233 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 GE YN+GG + + D+ G+LL A+ ++ + + +I DRP +D RY+ID +K Sbjct: 234 PGEVYNLGGGADLSSKDLT---GYLL-AVCGATW---DAVTYIPDRPANDIRYSIDWAKA 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 + ++G+ P+ +E GL +T WY N W P+ + P Sbjct: 287 RDQLGYRPKRRLEDGLAETAEWYRRNPDRWAPIARGKIP 325 >gi|28377963|ref|NP_784855.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum WCFS1] gi|300768303|ref|ZP_07078207.1| dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28270797|emb|CAD63702.1| dTDP-glucose 4,6-dehydratase [Lactobacillus plantarum WCFS1] gi|300494091|gb|EFK29255.1| dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 342 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 207/347 (59%), Gaps = 40/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y+ N ++++ V+DKLTYAGN +L+EI + + DICD Sbjct: 4 LLVTGGAGFIGSNFVHYVYNHHPEVKITVLDKLTYAGNRANLEEI-LGDRVKLVVGDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ Q DA+V++AAESH D S+ FI TNIIGT+ L++ Sbjct: 63 APLVDELMQ--QTDAVVHYAAESHNDNSLKDPWPFIETNIIGTYTLIQSAH--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSS------PYSATKASSDY 166 K RF +STDEVYG L ED+P + P+S PYS++KASSD Sbjct: 112 -KFNKRFHHVSTDEVYGDLP---LREDLPGHGEGVGEKFTPTSRYKPSSPYSSSKASSDL 167 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW ++G+ +SNCSNNYGPY + EK IP IT ++ G LYG G+NVRDW++ Sbjct: 168 LVRAWVRSFGLQATISNCSNNYGPYQYIEKFIPRQITNILSGIRPKLYGSGKNVRDWIHT 227 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 DH A++ +L KG+IGE Y IG + E N D++ I L+ PK + ++D Sbjct: 228 NDHSAAVWDILTKGKIGETYLIGADGEMNNKDVLEMILELMGQ--PK-----DAYDVVKD 280 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 RPGHD RYAIDS+K+++E+GW P+ + SGL T+ WY D+ WW+ Sbjct: 281 RPGHDLRYAIDSTKLRTELGWQPEFTDFRSGLKATIDWYTDHQDWWQ 327 >gi|328957828|ref|YP_004375214.1| dTDP-glucose 4,6-dehydratase [Carnobacterium sp. 17-4] gi|328674152|gb|AEB30198.1| dTDP-glucose 4,6-dehydratase [Carnobacterium sp. 17-4] Length = 311 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 138/316 (43%), Positives = 183/316 (57%), Gaps = 35/316 (11%) Query: 30 VIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRS 89 ++DKLTYAGN +L + ++ + DI D E + +K+ D +V++AAESH D S Sbjct: 1 MLDKLTYAGNKENLAGLP-ADRVELIVGDIVDAELVDRLVKD--ADVVVHYAAESHNDNS 57 Query: 90 ILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD-------- 141 + F+ TNI+GT+ LLE R K R+ +STDEVYG L Sbjct: 58 LNDPFPFVQTNIMGTYTLLEACR----------KYDVRYHHVSTDEVYGDLPLREDLPGN 107 Query: 142 ----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL 197 F+ + PYNPSSPYS+TKA SD LV AW ++G+ +SNCSNNYGPY EK Sbjct: 108 GEGPGEKFTSETPYNPSSPYSSTKAGSDLLVKAWVRSFGLKATISNCSNNYGPYQHIEKF 167 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNI 257 IP IT ++ G LYG+G+NVRDW++ DH A++ +L KGRIGE Y IG + E N Sbjct: 168 IPRQITNILSGIQPKLYGEGKNVRDWIHTNDHSSAVWEILTKGRIGETYLIGADGEENNK 227 Query: 258 DIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMES 315 ++ I LL+ PK +Y H + DR GHD RYAIDS K++ E+GW PQ N Sbjct: 228 QVLEMILELLNK--PKDAYEH------VTDRVGHDLRYAIDSRKLRDELGWTPQYTNFHD 279 Query: 316 GLNKTVCWYLDNNWWW 331 GL T+ WY DN WW Sbjct: 280 GLADTIKWYTDNKNWW 295 >gi|302348460|ref|YP_003816098.1| DTDP-glucose 4,6-dehydratase [Acidilobus saccharovorans 345-15] gi|302328872|gb|ADL19067.1| DTDP-glucose 4,6-dehydratase [Acidilobus saccharovorans 345-15] Length = 325 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 141/335 (42%), Positives = 189/335 (56%), Gaps = 31/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R+ V GGAGFIGSA+ R L N ++ LV D LTYAG +L Q F++ DI Sbjct: 5 VRVAVLGGAGFIGSAVVREL-NRRGMRPLVFDLLTYAGRPENL----QGTDHEFVRGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + AL F+P+ I+N AAE+HVDRSI +F+TTN+IG +LE R Sbjct: 60 GPE-LHEALSRFRPEVIINLAAETHVDRSIYSPQDFVTTNVIGAVNVLEAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R L +STDEV+G G E P PSSPYSA+KAS+++ VLA+ TYG+ Sbjct: 111 --RLGVRLLHVSTDEVFGDASVYGCADESSPLRPSSPYSASKASAEHFVLAYVRTYGLEA 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L++ SNNYGP PEKLIP AI R + G V +YG G RDW+YVED R L + K Sbjct: 169 LVARPSNNYGPRQHPEKLIPKAIIRTLLGLEVPVYGSGLQRRDWMYVEDTARLLVDLALK 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YN+ G + N++I+ LI ++ I+ +EDRPGHD Y + S Sbjct: 229 GEAGRGYNLPGGHVATNLEIL--------GLIGRALGREVKIKHVEDRPGHDVEYCMRPS 280 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + +E G+ +TV WY++N WWRPL Sbjct: 281 FS------YWTTPLEDGIGRTVRWYIENQEWWRPL 309 >gi|194466817|ref|ZP_03072804.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri 100-23] gi|194453853|gb|EDX42750.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri 100-23] Length = 346 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 143/348 (41%), Positives = 200/348 (57%), Gaps = 41/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +IVTGGAGFIGS Y+VN + V+DKLTYAGN +L + + N DIC Sbjct: 7 IIVTGGAGFIGSNFVHYVVNHHPEVEHITVLDKLTYAGNPANLDGLPK-NKVELAVGDIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + Q DA+V++AAESH D S++ FI TNI+GT +L+ R Sbjct: 66 DKDLVDKLVS--QADAVVHYAAESHNDNSLIDPTPFIQTNIVGTSVLINACR-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS------D 165 K R+ ISTDEVYG L ED+P + P SPY + S D Sbjct: 116 --KYDVRYHHISTDEVYGDLP---LREDLPGHGEGKGEKFTPESPYRPSSPYSSSKASSD 170 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 171 LLVRAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGSGKNVRDWIH 230 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH RA++ +L KG+IGE Y IG + E+ N + V E+ L +Y H ++ Sbjct: 231 TNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPKDAYDH------VK 283 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW+ Sbjct: 284 DRPGHDLRYAIDATKLRTELGWEPEFTDFKTGLQHTIDWYTEHQDWWK 331 >gi|228984392|ref|ZP_04144571.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775361|gb|EEM23748.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 203 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/207 (55%), Positives = 150/207 (72%), Gaps = 8/207 (3%) Query: 129 LQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNN 187 +Q+STDEVYGSL K G F+E+ P P+SPYS++KAS+D + L++ TY +PV+++ CSNN Sbjct: 1 MQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALSYYKTYQLPVIVTRCSNN 60 Query: 188 YGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYN 247 YGPY +PEKLIPL +T +EG + LYGDG NVRDWL+V DH A+ +VL KGRIGE YN Sbjct: 61 YGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRIGEVYN 120 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 IGGNNE+ N+D+V +I LL + I ++ DR GHDRRYAID+ K+K+E+GW Sbjct: 121 IGGNNEKTNVDVVEQIITLLGKT-------KKDIAYVTDRLGHDRRYAIDAQKMKNELGW 173 Query: 308 FPQENMESGLNKTVCWYLDNNWWWRPL 334 PQ E GL +TV WY + WW+PL Sbjct: 174 EPQYTFEQGLEETVEWYEHHIEWWKPL 200 >gi|194466301|ref|ZP_03072288.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri 100-23] gi|194453337|gb|EDX42234.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri 100-23] Length = 346 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 142/348 (40%), Positives = 200/348 (57%), Gaps = 41/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +IVTGGAGFIGS Y+VN + V+DKLTYAGN +L + + + + DIC Sbjct: 7 IIVTGGAGFIGSNFVHYVVNHHPEVEHITVLDKLTYAGNPANLDGLPKDKV-ELVVGDIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + DA+V++AAESH D S++ FI TNI+GT +L+ R Sbjct: 66 DKDLVDKLVS--NADAVVHYAAESHNDNSLIDPTPFIQTNIVGTSVLINACR-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS------D 165 K R+ ISTDEVYG L ED+P + P SPY + S D Sbjct: 116 --KYDVRYHHISTDEVYGDLP---LREDLPGHGEGKGEKFTPESPYRPSSPYSSSKASSD 170 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 171 LLVRAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGSGKNVRDWIH 230 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH RA++ +L KG+IGE Y IG + E+ N + V E+ L SY H ++ Sbjct: 231 TNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPKDSYDH------VK 283 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW+ Sbjct: 284 DRPGHDLRYAIDATKLRTELGWKPEFTDFKTGLQHTIDWYTEHQDWWK 331 >gi|300909572|ref|ZP_07127033.1| dTDP glucose 4,6-dehydratase [Lactobacillus reuteri SD2112] gi|300893437|gb|EFK86796.1| dTDP glucose 4,6-dehydratase [Lactobacillus reuteri SD2112] Length = 346 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 141/348 (40%), Positives = 201/348 (57%), Gaps = 41/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +IVTGGAGFIGS Y+VN + V+DKLTYAGN +L + + + + DIC Sbjct: 7 IIVTGGAGFIGSNFVHYVVNHHPEVEHITVLDKLTYAGNPANLDGLPKDKV-ELVVGDIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + + DA+V++AAESH D S++ FI TNI+GT +L+ R Sbjct: 66 DKDLVDKLVS--KADAVVHYAAESHNDNSLIDPTPFIQTNIVGTSVLINACR-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS------D 165 K R+ ISTDEVYG L ED+P + P SPY + S D Sbjct: 116 --KYDVRYHHISTDEVYGDLP---LREDLPGHGEGKGEKFTPESPYRPSSPYSSSKASSD 170 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW++ Sbjct: 171 LLVRAWIRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGSGKNVRDWIH 230 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 DH RA++ +L KG+IGE Y IG + E+ N + V E+ L +Y H ++ Sbjct: 231 TNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPKDAYDH------VK 283 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 DRPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW+ Sbjct: 284 DRPGHDLRYAIDATKLRTELGWEPEFTDFKTGLQHTIDWYTEHQDWWK 331 >gi|15922289|ref|NP_377958.1| dTDP-glucose 4,6-dehydratase [Sulfolobus tokodaii str. 7] gi|15623078|dbj|BAB67067.1| 320aa long hypothetical dTDP-glucose 4,6-dehydratase [Sulfolobus tokodaii str. 7] Length = 320 Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 190/327 (58%), Gaps = 36/327 (11%) Query: 14 SALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQ 73 SA R VN I+ +VID LTYAG + +L + F++ DI E I + LKE + Sbjct: 12 SAFVRE-VNRRGIKPVVIDLLTYAGRMENLIGTNHD----FVRADIRSEE-IHNILKEKE 65 Query: 74 P--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQI 131 + +VNFAAE+HVDRSI +F+TTN+IG LLE R K F ++ I Sbjct: 66 SASNVVVNFAAETHVDRSIYKPQDFVTTNVIGVVNLLEAAR----------KYDFNYVHI 115 Query: 132 STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPY 191 STDEVYG + ED P PSSPYSA+KAS+D V A+ TYGI ++ SNNYGP Sbjct: 116 STDEVYG---EECGDEDSPLKPSSPYSASKASADLFVKAYVRTYGIKAIIIRPSNNYGPR 172 Query: 192 HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGG 250 FPEKLIP I R + G +V +YGDG+ RDW+YVED R +Y +L+ GE YNI G Sbjct: 173 QFPEKLIPKVIIRTLMGEYVPIYGDGRAERDWIYVEDTARIIYDILEMAEWRGEVYNIPG 232 Query: 251 NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 +D+V IG ++ + I+F+ DRPGHDRRY + +K+K E+ Sbjct: 233 GQRYSVLDVVKMIGEVMGREVK--------IKFVSDRPGHDRRYCM-ITKLKYEV----- 278 Query: 311 ENMESGLNKTVCWYLDNNWWWRPLYKE 337 + GL +TV WYL+N WWW PL K+ Sbjct: 279 TPLREGLRRTVEWYLNNRWWWEPLIKD 305 >gi|301165682|emb|CBW25254.1| dTDP-glucose 4,6-dehydratase [Bacteriovorax marinus SJ] Length = 336 Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 143/335 (42%), Positives = 202/335 (60%), Gaps = 19/335 (5%) Query: 3 LIVTGGAGFIGSALCRYL--VNDLK--IQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQV 57 +I+TG AGFIGS + +N+++ L+ID LTY G S+KE I + SF ++ Sbjct: 5 IILTGCAGFIGSNFVNSIAQINEIRKAYNFLIIDNLTYCGIYESIKESIDNNEHLSFKRI 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + K P I++FAAESHVD SI + FI TNIIGT LL + Sbjct: 65 DIRNPSEVAELKKIKNPHGIIHFAAESHVDNSIKNPNIFIETNIIGTLNLLNLSLK---- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ FRFL ISTDEVYGSL + F+E+ PSSPYS++KA SD LV ++ HTY Sbjct: 121 -LRETNSNFRFLHISTDEVYGSLRELENAFTENHQIKPSSPYSSSKAGSDLLVKSYFHTY 179 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + +++ CSNNYGP+ FPEKLIP I + G + +YG+G N+RDW+YV+DH R ++ Sbjct: 180 SLNTVITRCSNNYGPFQFPEKLIPKTIINGLSGMPIPIYGNGMNIRDWIYVDDHNRGVWA 239 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 KG+ GE YN+GG E++NI+I I + + +LI + EDR GHD RYA Sbjct: 240 AYTKGKSGETYNLGGECEKRNIEIAKNI-------LKRINRSEDLIIYTEDRLGHDWRYA 292 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +D K + E+ W P+ + G++KT+ WY +N W Sbjct: 293 VDIKKSQEELSWKPKTSFPEGIDKTIEWYKENQKW 327 >gi|283488505|gb|ADB24774.1| rhamnose synthase [Gossypium hirsutum] Length = 681 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 135/342 (39%), Positives = 200/342 (58%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S +C L+ N +++V+DKL Y +L +L S F F++ DI Sbjct: 10 ILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSSLKNLDPSRSSPNFKFIKGDIAS 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+ D I++FAA++HVD S + EF NI GT +LLE ++ Q Sbjct: 70 ADLVHFILQTEFIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQI 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 K----RFIHVSTDEVYGETDEDAMVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YG FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 182 VITTRGNNVYGTNQFPEKLIPKFILLAMNGKILPIHGDGSNVRSYLYCEDVAEAFEVILH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G +G YNIG ER+ ID+ +I L + L P+S I+F+E+RP +D+RY +D Sbjct: 242 RGEVGHVYNIGTKKERRVIDVARDICRLFN-LDPESQ-----IKFVENRPFNDQRYFLDD 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+KS +GW+ + E GL KT+ WY+ N WW + L P Sbjct: 296 QKLKS-LGWYERTTWEEGLKKTMEWYVSNPDWWGDVSGALLP 336 >gi|330972805|gb|EGH72871.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 188 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 110/188 (58%), Positives = 140/188 (74%), Gaps = 2/188 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++ + V+ +DKLTYAGNL SL+ QS ++F VDIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIIANTTDSVVNVDKLTYAGNLESLQSADQSERYAFEHVDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + KE QPDA+++ AAESHVDRSI G EFI TNIIGT+ LLE R +WS L + Sbjct: 61 NREDVDRVFKEHQPDAVMHLAAESHVDRSITGPSEFIQTNIIGTYTLLEAARGYWSQLDE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K FRF ISTDEVYG L+ + LF+E PY PSSPYSA+KASSD+LV AW TYG+P Sbjct: 121 ARKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSRTYGLP 180 Query: 179 VLLSNCSN 186 L++NCSN Sbjct: 181 TLVTNCSN 188 >gi|158318028|ref|YP_001510536.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158113433|gb|ABW15630.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 342 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 136/337 (40%), Positives = 203/337 (60%), Gaps = 22/337 (6%) Query: 1 MRL---IVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 MRL +VTGGAGFIGS L L+++ ++ V V+D LTYAG+ ++L ++ S F++ Sbjct: 1 MRLRNVLVTGGAGFIGSHLVVRLISNPTVEKVTVLDALTYAGHRDNLAPVAASPKLEFVE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +I D + + S L + Q D + + AAESHVDRS L A F+ TN++GT +L+ + Sbjct: 61 GNILDADLLAS-LMDGQ-DGVAHLAAESHVDRSFLEAGNFLLTNVLGTQRVLD------A 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L+ + R + +STDEVYGS G +E P P+ PYSA+KA+SD LA +YG Sbjct: 113 ALAAGVR---RIVHVSTDEVYGSWPSGAATEVDPVRPTFPYSASKAASDLATLAHFRSYG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV ++ SN YGP PEK+IPL +TR+++G V L+G GQ++R+WL+VED+ + LV Sbjct: 170 TPVSVTRSSNCYGPAQHPEKIIPLFVTRLLQGLEVSLHGHGQHLRNWLHVEDNCAGIELV 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G+ GE YN+GG + ++ LL L +S + ++ DR +D RY++ Sbjct: 230 LRGGQPGEIYNLGGGTDLTT----HQLTALLLELCGADWS---AVSYVPDRTANDYRYSM 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 DSSK S +G+ P + L +TV WY D+ W P Sbjct: 283 DSSKAMSVLGYRPVRGLRESLVETVQWYRDHPDRWGP 319 >gi|224119002|ref|XP_002331301.1| predicted protein [Populus trichocarpa] gi|222873884|gb|EEF11015.1| predicted protein [Populus trichocarpa] Length = 670 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 192/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S +C L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKDLPIHGDGSNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YN+G ER+ ID+ +I L KS I+F+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNVGTKKERRVIDVAKDICNLFSMDPDKS------IKFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K +GW E GL KT+ WY N WW + L P Sbjct: 295 QKLKI-LGWSEHTTWEEGLRKTIEWYTQNPDWWGDVTGALLP 335 >gi|297830022|ref|XP_002882893.1| hypothetical protein ARALYDRAFT_478892 [Arabidopsis lyrata subsp. lyrata] gi|297328733|gb|EFH59152.1| hypothetical protein ARALYDRAFT_478892 [Arabidopsis lyrata subsp. lyrata] Length = 664 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 195/342 (57%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV + +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRSYPEYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L + D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG + YNIG ER+ ID+ +I L + P S I+F+E+RP +D+RY +D Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLF-GIDPDS-----TIQFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + N E G+ KT+ WY +N WW + L P Sbjct: 295 QKLK-KLGWCERTNWEEGVRKTMEWYTENPEWWGDVSGALLP 335 >gi|15231926|ref|NP_188097.1| RHM3 (RHAMNOSE BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic [Arabidopsis thaliana] gi|62901052|sp|Q9LH76|RHM3_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 3 gi|11994590|dbj|BAB02645.1| unnamed protein product [Arabidopsis thaliana] gi|19310443|gb|AAL84958.1| AT3g14790/T21E2_4 [Arabidopsis thaliana] gi|22655464|gb|AAM98324.1| At3g14790/T21E2_4 [Arabidopsis thaliana] gi|332642046|gb|AEE75567.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] Length = 664 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L + D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG + YNIG ER+ ID+ +I L + P S I+++E+RP +D+RY +D Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLF-GIDPDS-----TIQYVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + N E GL KT+ WY +N WW + L P Sbjct: 295 QKLK-KLGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLP 335 >gi|331012161|gb|EGH92217.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 204 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/182 (59%), Positives = 141/182 (77%), Gaps = 4/182 (2%) Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 SPYSA+KA+SD+LV AW TYG+PV+++NCSNNYGP+HFPEKLIPL I + G + +Y Sbjct: 1 SPYSASKAASDHLVRAWHRTYGLPVVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVY 60 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+G VRDWLYVEDH RAL V+ +G++GE YNIGG+NE+KNID+V I LLD L P+ Sbjct: 61 GNGLQVRDWLYVEDHARALLKVVTEGKVGETYNIGGHNEQKNIDVVRGICALLDELAPQH 120 Query: 275 YS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + +++LI ++ DRPGHD+RYAID+SKI +++GW P+E ESGL KTV WYLDN W Sbjct: 121 PTGVAQYSDLITYVVDRPGHDQRYAIDASKIDNDLGWTPEETFESGLRKTVQWYLDNLDW 180 Query: 331 WR 332 R Sbjct: 181 CR 182 >gi|300933808|ref|ZP_07149064.1| dTDP-glucose-4,6-dehydratase [Corynebacterium resistens DSM 45100] Length = 415 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 148/385 (38%), Positives = 200/385 (51%), Gaps = 73/385 (18%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-------FSF 54 L+VTGGAGFIG+ R L +++L++D +TYA N ++L L FSF Sbjct: 32 LLVTGGAGFIGANFVHRTLQTRSDVRILMVDAMTYAANPDNLATTDGVPLTEAFPGRFSF 91 Query: 55 LQVDICDRECIRSALKEFQPD--------AIVNFAAESHVDRSILGADEFITTNIIGTFI 106 Q+DI D + + + E+ D AIV+FAAESH D S+L F TN+ GT Sbjct: 92 SQLDIADAPKLHTLISEWVNDLPATGMRAAIVHFAAESHNDNSLLDPGIFARTNVEGTVN 151 Query: 107 LLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKAS 163 L E + ISTDEV+G L D F+ + PY PSSPYSA+KAS Sbjct: 152 LCEAA----------VQHGIHLHHISTDEVFGDLALDDPARFTVETPYAPSSPYSASKAS 201 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 +D+ V A+ + G+ +SNCSNNYGP PEK IP IT +IEG LYG G NVRDW Sbjct: 202 ADHFVRAFVRSRGLSATISNCSNNYGPRQHPEKFIPRQITGLIEGEKPRLYGTGDNVRDW 261 Query: 224 LYVEDHVRALYLVL--------------------------------KKGRI---GERYNI 248 ++V+DH A++ +L + R+ G+ + I Sbjct: 262 IHVDDHNDAVWAILDAVAAHVRETDGCLGAHDRGARTVEDAHSAVRSESRLVEKGQTFLI 321 Query: 249 GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWF 308 G N ER N+++V + LL+A T + DRPGHDRRYAID S I++ +GW Sbjct: 322 GANGERSNLEVVQD---LLEAF----GRETNDFVHVTDRPGHDRRYAIDPSSIET-LGWK 373 Query: 309 PQ-ENMESGLNKTVCWYLDNNWWWR 332 P+ + +GL TV WY DN WWR Sbjct: 374 PKYTDFRAGLEATVNWYRDNERWWR 398 >gi|211906526|gb|ACJ11756.1| rhamnose synthase [Gossypium hirsutum] Length = 667 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 195/342 (57%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L ++ P++ I+F+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICKLF-SMDPETS-----IKFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K+ +GW Q E GL KT+ WY N WW + L P Sbjct: 295 EKLKN-LGWSEQTVWEEGLKKTIEWYTQNPEWWGDVSGALLP 335 >gi|15898578|ref|NP_343183.1| dTDP-glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus P2] gi|284174229|ref|ZP_06388198.1| dTDP-glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus 98/2] gi|13815027|gb|AAK41973.1| dTDP-Glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus P2] gi|261603038|gb|ACX92641.1| NAD-dependent epimerase/dehydratase [Sulfolobus solfataricus 98/2] Length = 312 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 188/325 (57%), Gaps = 36/325 (11%) Query: 14 SALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQ 73 SA R VN I+ +V+D LTYAG +L F++ D+ E I +K Sbjct: 12 SAFVRE-VNKRGIKPIVVDLLTYAGRKENLIGTEHE----FIRADVRSEE-IHDIVK--N 63 Query: 74 PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQIST 133 D +VNFAAE+HVDRSI +F+TTN++G LLE R K F+++ IST Sbjct: 64 SDIVVNFAAETHVDRSIYRPQDFVTTNVLGVVNLLEAAR----------KYDFKYVHIST 113 Query: 134 DEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 DEVYG + ED P PSSPYSA+KAS+D V A+ TYGI ++ SNNYGP F Sbjct: 114 DEVYG---EECADEDSPLQPSSPYSASKASADLFVKAYVRTYGIKAIIVRPSNNYGPRQF 170 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGGNN 252 PEKLIP I R HV +YGDG+ RDW+YVED VR +Y ++++ GE YNI G Sbjct: 171 PEKLIPKVIIRTFLNMHVPIYGDGRAERDWIYVEDTVRIIYDIMERSEWRGEVYNIPGGQ 230 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 +D++ IG ++ + ++F++DRPGHD+RY + ++K+K E+ Sbjct: 231 RYSVLDVIKIIGEIMGKEVK--------VKFVDDRPGHDKRYCM-TTKLKYEVT-----P 276 Query: 313 MESGLNKTVCWYLDNNWWWRPLYKE 337 ++ GL KTV WYL+N WWW L K+ Sbjct: 277 LKEGLRKTVEWYLNNRWWWEDLIKD 301 >gi|297839725|ref|XP_002887744.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] gi|297333585|gb|EFH64003.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] Length = 669 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 193/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ ++V+DKL Y NL +L QS F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLIRSYPHYNIVVLDKLDYCSNLKNLNPSKQSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ D+ +I L ++ P++ I+F+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTKKERRVNDVARDICKLF-SMDPEAN-----IKFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + E GL KT+ WY N WW + L P Sbjct: 295 QKLK-KLGWSERTTWEEGLKKTMEWYTQNPEWWGDVSGALLP 335 >gi|42562732|ref|NP_564633.2| MUM4 (MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic [Arabidopsis thaliana] gi|62901054|sp|Q9LPG6|RHM2_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 2; AltName: Full=NDP-rhamnose synthase; AltName: Full=Protein MUCILAGE-MODIFIED 4; AltName: Full=Protein RHAMNOSE BIOSYNTHESIS 2; AltName: Full=UDP-L-rhamnose synthase MUM4 gi|8671876|gb|AAF78439.1|AC018748_18 Contains similarity to dTPD-D-glucose-4,6-dehydratase from Sphingomonas sp.S88 gb|U51197 and contains a NAD dependent epimerase/dehydratase PF|01370 domain [Arabidopsis thaliana] gi|12324032|gb|AAG51981.1|AC024260_19 dTDP-D-glucose 4,6-dehydratase, putative; 102946-105028 [Arabidopsis thaliana] gi|31559259|emb|CAD92667.1| putative NDP-rhamnose synthase [Arabidopsis thaliana] gi|33090264|gb|AAP93963.1| putative UDP-L-rhamnose synthase MUM4 [Arabidopsis thaliana] gi|332194828|gb|AEE32949.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] Length = 667 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N +++V+DKL Y +L +L S F F++ DI Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 127 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 128 -----RFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEK+IP I + G + ++GDG NVR +LY ED A +VL Sbjct: 183 VITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IG YN+G ER+ ID+ +I L P+S I+F+E+RP +D+RY +D Sbjct: 243 KGEIGHVYNVGTKRERRVIDVARDICKLF-GKDPESS-----IQFVENRPFNDQRYFLDD 296 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + N E GL KT+ WY N WW + L P Sbjct: 297 QKLK-KLGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLP 337 >gi|283488503|gb|ADB24773.1| rhamnose synthase [Gossypium hirsutum] Length = 667 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 191/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV + +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSQSSRNFKFVKGDIGS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGTNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YN+G ER+ ID+ +I L S I+F+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLF------SMDSETSIKFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K+ +GW + E GL KT+ WY N WW + L P Sbjct: 295 QKLKN-LGWSERTVWEDGLKKTIEWYTQNPDWWGDVSGALLP 335 >gi|326508884|dbj|BAJ86835.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326533294|dbj|BAJ93619.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 675 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 132/344 (38%), Positives = 194/344 (56%), Gaps = 23/344 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ +++V+DK+ Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLIRSYPHYKIVVLDKIDYCSNLKNLNPSRPSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMKGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG +G YNIG ER+ ID+ +I F LD ++IRF+E+RP +D+RY + Sbjct: 241 KGEVGHVYNIGTVKERRVIDVASDICKLFGLDT--------EKVIRFVENRPFNDQRYFL 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 D K+K ++GW + E GL KT+ WY N +W + L P Sbjct: 293 DDQKLK-KLGWAERTTWEEGLKKTIEWYTSNPEYWGDVAGALLP 335 >gi|242041371|ref|XP_002468080.1| hypothetical protein SORBIDRAFT_01g039220 [Sorghum bicolor] gi|241921934|gb|EER95078.1| hypothetical protein SORBIDRAFT_01g039220 [Sorghum bicolor] Length = 672 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 191/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++V+DKL Y +L +L S F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLKNLNPSRASQNLKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNHLLVTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L D K +IRF+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICRLFDLDTEK------VIRFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K +GW + E GL KT+ WY N +W + L P Sbjct: 295 QKLK-RLGWAERTPWEEGLKKTIEWYTTNPDYWGDVTGALLP 335 >gi|226503239|ref|NP_001151455.1| RHM1 [Zea mays] gi|195646918|gb|ACG42927.1| RHM1 [Zea mays] gi|223975679|gb|ACN32027.1| unknown [Zea mays] Length = 672 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 132/342 (38%), Positives = 193/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N + +++V+DK+ Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPQYKIVVLDKIDYCSNLKNLNPSRSSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L ++IRF+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLF------GLDTEKVIRFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K +GW + E GL KT+ WY N +W + L P Sbjct: 295 QKLK-RLGWAERTPWEEGLKKTMEWYTTNPDYWGDVTGALLP 335 >gi|297520374|ref|ZP_06938760.1| dTDP-glucose 4,6 dehydratase [Escherichia coli OP50] Length = 186 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 102/165 (61%), Positives = 125/165 (75%) Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +LV AW TYG+P +++NCSNNYGPYHFPEKLIPL I +EG + +YG G +RDWLY Sbjct: 1 HLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLY 60 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 VEDH RALY V+ +G+ GE YNIGG+NE+KNID+VF I LLD ++PK S+ E I ++ Sbjct: 61 VEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVA 120 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRPGHDRRYAID+ KI E+GW PQE ESG+ KTV WYL N W Sbjct: 121 DRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 165 >gi|115452247|ref|NP_001049724.1| Os03g0278200 [Oryza sativa Japonica Group] gi|108707482|gb|ABF95277.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa Japonica Group] gi|108707483|gb|ABF95278.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa Japonica Group] gi|108707484|gb|ABF95279.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa Japonica Group] gi|113548195|dbj|BAF11638.1| Os03g0278200 [Oryza sativa Japonica Group] gi|218192544|gb|EEC74971.1| hypothetical protein OsI_10998 [Oryza sativa Indica Group] gi|222624667|gb|EEE58799.1| hypothetical protein OsJ_10344 [Oryza sativa Japonica Group] Length = 675 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/342 (38%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++V+DKL Y +L++L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L ++IRF+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLF------GLDTEKVIRFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + E GL KT+ WY +N +W + L P Sbjct: 295 QKLK-KLGWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLP 335 >gi|15218420|ref|NP_177978.1| RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic [Arabidopsis thaliana] gi|62901057|sp|Q9SYM5|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gi|4836876|gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|14596091|gb|AAK68773.1| Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|20148285|gb|AAM10033.1| similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|332198001|gb|AEE36122.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] Length = 669 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 130/342 (38%), Positives = 193/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ D+ +I L + + P++ I+F+++RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFN-MDPEAN-----IKFVDNRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + E GL KT+ WY N WW + L P Sbjct: 295 QKLK-KLGWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLP 335 >gi|108707485|gb|ABF95280.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa Japonica Group] Length = 545 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 133/342 (38%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++V+DKL Y +L++L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L K +IRF+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEK------VIRFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + E GL KT+ WY +N +W + L P Sbjct: 295 QKLK-KLGWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLP 335 >gi|284162300|ref|YP_003400923.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] gi|284012297|gb|ADB58250.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] Length = 837 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 109/206 (52%), Positives = 143/206 (69%), Gaps = 7/206 (3%) Query: 132 STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPY 191 +TDEVYG + KG F E+ PSSPYSA+KA++D VLAW TYG+ +++ C+NNYGPY Sbjct: 627 NTDEVYGDIIKGSFKEEDRLKPSSPYSASKAAADMFVLAWVRTYGLHAMITRCTNNYGPY 686 Query: 192 HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGN 251 FPEKLIP I R V +YG G+NVRDW+YV DH A+ LV+++G GE YNI Sbjct: 687 QFPEKLIPKTIIRASMNLKVPIYGTGKNVRDWIYVLDHCEAVDLVMREGEKGEVYNISSG 746 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 E+ N+++V I LD L+ K S LI F+EDRPGHD RY++DSSKI+ E+GW P+ Sbjct: 747 EEKTNLEVVRTI---LD-LMGKDES---LIEFVEDRPGHDLRYSLDSSKIREELGWKPKH 799 Query: 312 NMESGLNKTVCWYLDNNWWWRPLYKE 337 + + G+ KTV WY++N WWWRPL E Sbjct: 800 SFKEGIRKTVKWYIENEWWWRPLADE 825 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 3/113 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGG GFIGS RYL++ ++V+ +D + Y N N+LK++ ++F++ DI Sbjct: 1 MRVLVTGGLGFIGSNFIRYLLDKYSDVEVVNVDAMKYGSNPNNLKDVEGDERYTFVKGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 D E I +K+ DAIVN AAESHVDRSI F+ +N+IG F +LE R Sbjct: 61 SDYELISKLVKDV--DAIVNLAAESHVDRSISNPYSFLQSNVIGVFTILEAVR 111 >gi|255030409|ref|ZP_05302360.1| hypothetical protein LmonL_17336 [Listeria monocytogenes LO28] Length = 219 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 109/214 (50%), Positives = 157/214 (73%), Gaps = 8/214 (3%) Query: 127 RFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 ++LQ+STDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ V ++ CS Sbjct: 10 KYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLNVNITRCS 69 Query: 186 NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER 245 NNYGP+HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ G+ GE Sbjct: 70 NNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIHNGKSGEV 129 Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEI 305 YN+GG+NER N +IV ++D L + S +++ ++EDR GHD RYAID KI++E+ Sbjct: 130 YNVGGHNERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDPKKIETEL 182 Query: 306 GWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 GW P+ ++G+ +T+ WY++N WWRPL K Sbjct: 183 GWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAK 216 >gi|225461808|ref|XP_002285634.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 675 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 129/342 (37%), Positives = 196/342 (57%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G +G YNIG ER+ ID+ ++ L ++ P++ I+F+E+RP +D+RY +D Sbjct: 241 RGEVGHVYNIGTKKERRVIDVAKDVCNLF-SMDPETS-----IKFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K +GW + + GL KT+ WY++N WW + L P Sbjct: 295 QKLKI-LGWSERTTWQEGLKKTMEWYINNPNWWGDVSGALLP 335 >gi|328774212|gb|EGF84249.1| hypothetical protein BATDEDRAFT_18531 [Batrachochytrium dendrobatidis JAM81] Length = 371 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 129/347 (37%), Positives = 198/347 (57%), Gaps = 24/347 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + +LV + DKL Y +L SL+E+ +SF++ D+C Sbjct: 16 ILVTGGAGFIGSHVVIHLVKSFPSWNIYAFDKLDYCASLKSLQEVVDYPNYSFIKGDVCS 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I L E + D I++ AA+SHVD S + EF N+ GT +LLE R Sbjct: 76 AEFINYLLSEKKIDVILHLAAQSHVDNSFGDSLEFTRNNVYGTHVLLEAAR--------- 126 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWGHTY 175 RF+ +STDEVYG +D ++ N PS+PY+ATKA+++ LV+A+ ++ Sbjct: 127 AHKIRRFVHVSTDEVYGEVDHQEACKNPDMNETSILAPSNPYAATKAAAECLVMAYYKSF 186 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P++++ +N +GP+ +PEK+IP I +++ +++GDG N R +L+ D RAL + Sbjct: 187 KLPIIITRSNNIFGPFQYPEKIIPKFICSILKNLPCYIHGDGSNSRRYLFAGDLTRALTI 246 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L G+ GE YNIG + E N+++ + + K+ IRF+EDR +D+RYA Sbjct: 247 ILLHGKFGETYNIGSDCEITNLELTRSLLRHFNIADEKNS-----IRFVEDRAFNDKRYA 301 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL--DNNWWWRPLYKELKP 340 IDSSKI S +GW P E G+ T+ WY +NWW + L P Sbjct: 302 IDSSKIHS-LGWRPTTTFEEGIRITIEWYRAHADNWWGDNISSALVP 347 >gi|297853126|ref|XP_002894444.1| mucilage-modified 4 [Arabidopsis lyrata subsp. lyrata] gi|297340286|gb|EFH70703.1| mucilage-modified 4 [Arabidopsis lyrata subsp. lyrata] Length = 668 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 132/342 (38%), Positives = 192/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ +++V+DKL Y +L +L S F F++ DI Sbjct: 12 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 72 DDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 128 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 129 -----RFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 183 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEK+IP I + G + ++GDG NVR +LY ED A +VL Sbjct: 184 VITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 243 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IG YNIG ER+ ID+ +I L P+S I+F+E+RP +D+RY +D Sbjct: 244 KGEIGHVYNIGTKRERRVIDVARDICKLF-GKDPESS-----IQFVENRPFNDQRYFLDD 297 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW + E GL KT+ WY N WW + L P Sbjct: 298 QKLK-KLGWQERTTWEDGLKKTMDWYTQNPEWWGDVSGALLP 338 >gi|262276762|ref|ZP_06054555.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium HIMB114] gi|262223865|gb|EEY74324.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium HIMB114] Length = 341 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 139/336 (41%), Positives = 205/336 (61%), Gaps = 11/336 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS L L+ V+++DK TY+ N+ ++ +++ N + + DI + Sbjct: 6 ILVTGGLGFIGSNLVIELIKQ-NYFVIIVDKKTYSSNMMNINHLNKKN-YKLIISDINNG 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I L +F+P AI N AAE+HVDRSI FI +NI G F LLE+ + + + Sbjct: 64 KKISKILNQFKPVAIFNLAAETHVDRSIDDPSSFIQSNINGVFQLLEQFKKFNKKSKKS- 122 Query: 123 KDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +FL ISTDEVYG + K +S E Y PSSPY+A+KA+SD+L+ ++ TY +P+++ Sbjct: 123 ----KFLHISTDEVYGDIPKKKYSVETDSYKPSSPYAASKAASDHLIKSYIRTYKLPIII 178 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +NCSNNYGP FPEKLIP I +I ++ +YG G N R+W++V DH AL + KKG+ Sbjct: 179 TNCSNNYGPRQFPEKLIPKLIINIINNKNLPIYGKGNNEREWIHVNDHCNALIFIFKKGK 238 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 IGE YNIG + N + +I +L K + I +++DRPGHD RYA++S+K+ Sbjct: 239 IGESYNIGSDEILSNKILAKKILYLCKKKFGK--KNNSKIIYVKDRPGHDVRYALNSNKL 296 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K + GLN T+ WYL+N W + L K+ Sbjct: 297 KKLGWKKKYT-LIDGLNSTIEWYLNNFKWVKKLDKK 331 >gi|242090039|ref|XP_002440852.1| hypothetical protein SORBIDRAFT_09g008220 [Sorghum bicolor] gi|241946137|gb|EES19282.1| hypothetical protein SORBIDRAFT_09g008220 [Sorghum bicolor] Length = 666 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 195/342 (57%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + R +++V+DKL Y NL +L +S S F F++ DI Sbjct: 10 ILITGAAGFIASHVAIRVTKKYPDYKIVVLDKLDYCSNLKNLLPVSSSPNFKFVKGDIAS 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L + D I++FAA++HVD S + EF NI GT +LLE R+ Q Sbjct: 70 ADLVNFLLVTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACRI----TGQI 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D+ E P++PY+ATKA ++ LV+A+G +YG+P Sbjct: 126 K----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYAATKAGAEMLVMAYGRSYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ S +N +GP FPEKLIP I + G + ++GDG NVR ++Y ED A ++L Sbjct: 182 VITSRGNNVFGPNQFPEKLIPKFILLAMRGEPLPIHGDGGNVRSYIYCEDVAEAFEVILH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +G YNIG ER ID+ ++ L S ++I F+E+RP +D+RY +D Sbjct: 242 HGEVGHVYNIGTKRERTVIDVAKDVCKLF------SLEAGKVIMFVENRPFNDQRYFLDD 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+KS +GW + E GL KT+ WY+ N+ +W + L P Sbjct: 296 EKLKS-LGWAERTPWEEGLKKTMEWYVANSDYWGDVSGALLP 336 >gi|326530532|dbj|BAJ97692.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 667 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/342 (37%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + +V N +++V+DKL Y NL +L S S F F++ DI Sbjct: 10 ILITGAAGFIASHVTNRIVRNYPDYKIVVLDKLDYCSNLKNLLPASSSPNFKFVKGDIAS 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 70 ADLVNFLLVTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 126 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 127 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G +G YNIG ER D+ ++ L + K +I+F+++RP +D+RY +D Sbjct: 242 RGEVGHVYNIGTKRERTVTDVAKDVCRLFNLEADK------VIQFVDNRPFNDQRYFLDD 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+KS +GW + E GL KT+ WY+ N+ +W + L P Sbjct: 296 EKLKS-LGWSERTRWEEGLRKTMEWYVANSDYWGDVSGALLP 336 >gi|283488501|gb|ADB24772.1| rhamnose synthase [Gossypium hirsutum] Length = 667 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N + +++V+DKL Y N +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPEYKIVVLDKLDYCSNTKNLFPSKLSPSFKFVKGDIES 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L ++ P++ I F+E+RP +D+RY +D Sbjct: 241 KGEVGRVYNIGTKKERRVIDVAKDICKLF-SMDPETS-----IEFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 ++K+ +GW + E GL KT+ WY N WW + L P Sbjct: 295 QRLKN-LGWSERTVWEDGLKKTIEWYTQNPDWWGDVTGALLP 335 >gi|242041387|ref|XP_002468088.1| hypothetical protein SORBIDRAFT_01g039340 [Sorghum bicolor] gi|241921942|gb|EER95086.1| hypothetical protein SORBIDRAFT_01g039340 [Sorghum bicolor] Length = 672 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 190/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++V+DKL Y +L +L S F++ DI Sbjct: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLKNLNPSRASPNLKFVKGDIAS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNYLLVTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A +VL Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ +I L ++IRF+E+RP +D+RY +D Sbjct: 241 KGEVGHVYNIGTVKERRVIDVAKDICRLF------GLDTEKVIRFVENRPFNDQRYFLDD 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K +GW + E GL KT+ WY N +W + L P Sbjct: 295 QKLK-RLGWAERTPWEEGLKKTIEWYTTNPDYWGDVTGALLP 335 >gi|224121144|ref|XP_002330754.1| predicted protein [Populus trichocarpa] gi|222872556|gb|EEF09687.1| predicted protein [Populus trichocarpa] Length = 660 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 190/343 (55%), Gaps = 19/343 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TG AGFI S + R L+ D +++ +DKL Y NL +L S F F++ DI Sbjct: 12 KILITGAAGFIASHVIRRLIKDYPDYKIVALDKLDYCSNLKNLATCRGSPNFKFVKGDIA 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L D I++FAA++HVD S + EF T NI GT +LLE ++ Sbjct: 72 CADLVNHLLIAEDIDTIMHFAAQTHVDNSFGNSFEFTTNNIYGTHVLLEACKV------- 124 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF+ +STDEVYG D E P++PYSATKA ++ LV+A+ +YG+ Sbjct: 125 -TKKIKRFIHVSTDEVYGETDMETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P++ + +N YGP +PEKLIP I ++G + ++GDG NVR +LY ED A ++L Sbjct: 184 PIITTRGNNVYGPNQYPEKLIPKFILLALKGEQLPIHGDGSNVRSFLYCEDVAEAFDVIL 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG IG YNIG ER+ +D+ +I L KS I +++DRP +D RY +D Sbjct: 244 HKGAIGHVYNIGTKKERRVLDVAEDICKLYGLDPEKS------INYVQDRPFNDHRYFLD 297 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K ++GW E GL T+ WY N WW + L P Sbjct: 298 DQKLK-KLGWQESTPWEEGLKMTMEWYTKNPDWWDDVSAALHP 339 >gi|212274887|ref|NP_001130297.1| hypothetical protein LOC100191391 [Zea mays] gi|194688776|gb|ACF78472.1| unknown [Zea mays] Length = 676 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 196/342 (57%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + + +++V+DKL Y NL +L +S S F F++ DI Sbjct: 20 ILITGAAGFIASHVAIRITKKYPDYKIIVLDKLDYCSNLKNLLPVSSSPNFKFVKGDIAS 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE R+ Q Sbjct: 80 VDLVNFLLVTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACRIS----GQI 135 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D+ E P++PY+ATKA ++ LV+A+G +YG+P Sbjct: 136 K----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYAATKAGAEMLVMAYGRSYGLP 191 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 192 VITTRGNNVYGPNQFPEKLIPKFILLAMRGEPLPIHGDGVNVRSYLYCEDVAEAFEVILH 251 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +G YNIG ER +D+ ++ L + L P ++I F+E+RP +D+RY +D Sbjct: 252 HGEVGHVYNIGTKRERTVLDVAKDVCRLFN-LEPD-----KVIMFVENRPFNDQRYFLDD 305 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+KS +GW + E GL KT+ WY+ N+ +W + L P Sbjct: 306 EKLKS-LGWAERTPWEEGLKKTMEWYVANSDYWGDVSGALLP 346 >gi|319440773|ref|ZP_07989929.1| dTDP-glucose-4,6-dehydratase [Corynebacterium variabile DSM 44702] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 136/354 (38%), Positives = 195/354 (55%), Gaps = 36/354 (10%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEIS-QSNLFSFLQVDI 59 RL+VTGGAGFIGS R L + + V+D +TYA N +L + + S + Sbjct: 13 RLLVTGGAGFIGSNFVHRTLAMRPDVHITVLDAMTYAANPANLSGTGVELVVGSVADAAL 72 Query: 60 CDRECIRSALKEFQPDA----IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DR + +L E DA +V+FAAESH D ++ F+ TN GT +L E Sbjct: 73 VDRLVV--SLGEGTGDAGGAAVVHFAAESHNDNALRDPLRFVRTNTEGTAVLAE------ 124 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSL---------DKGLFSEDMPYNPSSPYSATKASSDY 166 +C+ + ISTDEV+G L + F+ D PY PSS YSA+KAS+D+ Sbjct: 125 ACV----RHGVHLHHISTDEVFGDLPLRGSGEPGSEDRFTVDTPYAPSSVYSASKASADH 180 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV A+ ++G+ +SNCSNNYGP PEK +P IT +++G LYG G+NVRDW++V Sbjct: 181 LVRAFVRSHGLSATISNCSNNYGPRQHPEKFLPRQITGLLDGETPRLYGTGENVRDWIHV 240 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +DH A++ +L +G GE Y IG + ER N++ V + + + H + D Sbjct: 241 DDHNDAVWAILDRGVAGETYLIGADGERSNLECVRALNGIF-GRDGDDFVH------VTD 293 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPLYKELK 339 RPGHD RYAID S + + +GW P+ + +GL TV WY D+ WW K+ + Sbjct: 294 RPGHDLRYAIDPSSMHA-LGWTPRFTDFAAGLADTVAWYRDHRDWWETSRKDAE 346 >gi|328478993|gb|EGF48485.1| dTDP-glucose 4,6-dehydratase [Lactobacillus rhamnosus MTCC 5462] Length = 359 Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 120/272 (44%), Positives = 165/272 (60%), Gaps = 32/272 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 85 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 143 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R Sbjct: 144 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAAR------- 194 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------------YNPSSPYSATKASS 164 K RF ISTDEVYG L ED+P YNPSSPYS+TKA+S Sbjct: 195 ---KYDVRFHHISTDEVYGDLP---LREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAAS 248 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRDW+ Sbjct: 249 DMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWI 308 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKN 256 + DH A++ +L +G++GE Y IG N E+ N Sbjct: 309 HTNDHSSAIWDILTQGKVGETYLIGANGEQDN 340 >gi|147816214|emb|CAN62061.1| hypothetical protein VITISV_001928 [Vitis vinifera] Length = 619 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 134/359 (37%), Positives = 194/359 (54%), Gaps = 23/359 (6%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++ +DKL Y N+ +L S+ F F++ DI Sbjct: 13 ILITGAAGFIASHVTNRLVKNHPDYRIVALDKLDYCSNVKNLGPSRSSSNFKFVKGDIVC 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 73 ADLVNHLLVAEDIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKV-------- 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D E P++PYSATKA ++ LV+A+ +YG+P Sbjct: 125 TKRIKRFIHVSTDEVYGETDLDTDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 185 TITTRGNNVYGPNQFPEKLIPKFILLAMKGEQLPIHGDGSNVRSYLYCEDVAEAFEVVLH 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG IG YNIG ER +D+ +I F LD+ + I F+ DRP +D+RY + Sbjct: 245 KGVIGHVYNIGTKKERSVLDVAEDICKLFRLDS--------KQAINFVHDRPFNDKRYFL 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSC 355 D K+K ++GW + E GL +T+ WY N WW + L P S N+ C Sbjct: 297 DDQKLK-KLGWEERTPWEEGLRRTMEWYTKNXGWWGDVSAALHPHPRISMIAFPNDDQC 354 >gi|255548608|ref|XP_002515360.1| dtdp-glucose 4,6-dehydratase, putative [Ricinus communis] gi|223545304|gb|EEF46809.1| dtdp-glucose 4,6-dehydratase, putative [Ricinus communis] Length = 369 Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 129/345 (37%), Positives = 193/345 (55%), Gaps = 23/345 (6%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TG AGFI S + L+ N +++ +DKL Y +L +L S F F++ DI Sbjct: 12 KILITGAAGFIASHVTNRLIRNYPDYKIVALDKLDYCSSLRNLTPCRSSPNFKFVKGDIA 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L D I++FAA++HVD S + EF T NI GT +LLE ++ Sbjct: 72 SADLVNHLLIAEDIDTIMHFAAQTHVDNSFGNSFEFTTNNIYGTHVLLEACKV------- 124 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF+ +STDEVYG D E P++PYSATKA ++ LV+A+ +YG+ Sbjct: 125 -TKKIKRFIHVSTDEVYGETDMETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGL 183 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P + + +N YGP +PEKLIP I ++G + ++G+G NVR +L+ ED A ++L Sbjct: 184 PTITTRGNNVYGPNQYPEKLIPKFIILAMKGEQLPIHGNGSNVRSYLHCEDVAEAFDVIL 243 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 KG IG YNIG ER+ +D+ +I F LDA + IRF++DRP +D+RY Sbjct: 244 HKGAIGHVYNIGTKKERRVLDVAEDICRLFRLDA--------KKAIRFVQDRPFNDQRYF 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 +D K+K ++GW + E GL T+ WY N WW + L P Sbjct: 296 LDDQKLK-KLGWQERTPWEEGLKMTMEWYTKNPNWWGDVSAALHP 339 >gi|302762504|ref|XP_002964674.1| hypothetical protein SELMODRAFT_266803 [Selaginella moellendorffii] gi|300168403|gb|EFJ35007.1| hypothetical protein SELMODRAFT_266803 [Selaginella moellendorffii] Length = 676 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 128/344 (37%), Positives = 194/344 (56%), Gaps = 23/344 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV +++V+DKL Y NL +L + +S F F++ DI Sbjct: 19 ILITGAAGFIASHVANRLVRSYPGYKIVVLDKLDYCSNLKNLYQSKESANFKFVKGDIAS 78 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ + Sbjct: 79 ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSLEFTKNNIYGTHVLLEACKVAGTIR--- 135 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG + E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 136 -----RFIHVSTDEVYGETEADAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 190 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 191 FITTRGNNVYGPNQFPEKLIPKFILLAMQGRPLPIHGDGSNVRSYLYAEDVAEAFEVVLH 250 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG +G YNIG ER+ +D+ +I F LD + I+F+++RP +D+RY + Sbjct: 251 KGEVGHVYNIGTKKERRVLDVAKDICKLFKLDPEV--------CIQFVDNRPFNDQRYFL 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 D K+K ++GW + + GL KT+ WY + WW + L P Sbjct: 303 DDKKLK-DLGWRERTTWDEGLLKTMQWYTSHPNWWGDVSGALVP 345 >gi|302815583|ref|XP_002989472.1| hypothetical protein SELMODRAFT_129972 [Selaginella moellendorffii] gi|300142650|gb|EFJ09348.1| hypothetical protein SELMODRAFT_129972 [Selaginella moellendorffii] Length = 675 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 128/344 (37%), Positives = 194/344 (56%), Gaps = 23/344 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV +++V+DKL Y NL +L + +S F F++ DI Sbjct: 19 ILITGAAGFIASHVANRLVRSYPGYKIVVLDKLDYCSNLKNLYQSKESANFKFVKGDIAS 78 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ + Sbjct: 79 ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSLEFTKNNIYGTHVLLEACKVAGTIR--- 135 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG + E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 136 -----RFIHVSTDEVYGETEADAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 190 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 191 FITTRGNNVYGPNQFPEKLIPKFILLAMQGRPLPIHGDGSNVRSYLYAEDVAEAFEVVLH 250 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG +G YNIG ER+ +D+ +I F LD + I+F+++RP +D+RY + Sbjct: 251 KGEVGHVYNIGTKKERRVLDVAKDICKLFKLDPEV--------CIQFVDNRPFNDQRYFL 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 D K+K ++GW + + GL KT+ WY + WW + L P Sbjct: 303 DDKKLK-DLGWRERTTWDEGLLKTMQWYTSHPNWWGDVSGALVP 345 >gi|225464343|ref|XP_002271970.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 657 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 134/359 (37%), Positives = 194/359 (54%), Gaps = 23/359 (6%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + LV N +++ +DKL Y N+ +L S+ F F++ DI Sbjct: 13 ILITGAAGFIASHVTNRLVKNHPDYRIVALDKLDYCSNVKNLGPSRSSSNFKFVKGDIVC 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 73 ADLVNHLLVAEDIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKV-------- 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D E P++PYSATKA ++ LV+A+ +YG+P Sbjct: 125 TKRIKRFIHVSTDEVYGETDLDTDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A +VL Sbjct: 185 TITTRGNNVYGPNQFPEKLIPKFILLAMKGEQLPIHGDGSNVRSYLYCEDVAEAFEVVLH 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG IG YNIG ER +D+ +I F LD+ + I F+ DRP +D+RY + Sbjct: 245 KGVIGHVYNIGTKKERSVLDVAEDICKLFRLDS--------KQAINFVHDRPFNDKRYFL 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSC 355 D K+K ++GW + E GL +T+ WY N WW + L P S N+ C Sbjct: 297 DDQKLK-KLGWEERTPWEEGLRRTMEWYTKNPGWWGDVSAALHPHPRISMIAFPNDDQC 354 >gi|303239970|ref|ZP_07326492.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] gi|302592449|gb|EFL62175.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] Length = 331 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/333 (37%), Positives = 195/333 (58%), Gaps = 14/333 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGGAGFIGS Y + K V+V D LTY+GN+N+L+EI +S + F++ IC+ Sbjct: 4 LLVTGGAGFIGSNFINYFLRRNKSYVIVNYDNLTYSGNMNNLREIERSPRYHFVKGSICN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +K +PD I+NFA+E+ +S++ F TN++GT LL+ R +W ++ Sbjct: 64 QDLVNYIIKRHRPDYIINFASETCPKKSLINPAPFFETNVMGTLTLLDSARYFW---GKN 120 Query: 122 KKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+Q+STDEVYG ++ F+ED P +PYSA+KAS+D LV ++ + YG P Sbjct: 121 NFEGNRFIQVSTDEVYGPVNAKDTYFTEDSAVMPENPYSASKASADLLVKSFSNNYGFPA 180 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALYLVLK 238 ++S C NNYGP +K +P I I + V L D N+ R+W++V DH AL +L Sbjct: 181 VISRCCNNYGPNQHIDKFVPSCIKNSILNNPVRLNEDANNIRREWIHVLDHCTALIRILF 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE YNI ++++ +I L KS E E + + +YA++S Sbjct: 241 YGRDGETYNISSGIAASDVELAKKILKTLG----KSEDQFETTGTSERQ---ELQYAVNS 293 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 KI++ + W + N++ G+ +TV WY +N WW Sbjct: 294 YKIRNNLNWGHKYNLDDGILETVRWYKENRDWW 326 >gi|291393148|ref|XP_002713048.1| PREDICTED: TDP-glucose 4,6-dehydratase [Oryctolagus cuniculus] Length = 355 Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 198/344 (57%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ + Sbjct: 79 DSHFVKRLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVS---------AA 129 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 130 HEAGVEKFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYQFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ E G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWEEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|195623672|gb|ACG33666.1| RHM1 [Zea mays] Length = 666 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 129/342 (37%), Positives = 194/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + + +++V+DKL Y NL +L +S S F F++ DI Sbjct: 10 ILITGAAGFIASHVAIRITKKYPDYKIIVLDKLDYCSNLKNLLPVSSSPNFKFVKGDIAS 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE R+ Q Sbjct: 70 VDLVNFLLVTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACRIS----GQI 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG D+ E P++PY+ATKA ++ LV+A+G +YG+P Sbjct: 126 K----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYAATKAGAEMLVMAYGRSYGLP 181 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I + G + ++GDG NVR +LY ED A ++L Sbjct: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMRGEPLPIHGDGVNVRSYLYCEDVAEAFEVILH 241 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +G YNIG ER +D+ ++ L + L P ++I F+E+RP +D+RY +D Sbjct: 242 HGEVGHVYNIGTKRERTVLDVAKDVCRLFN-LEPD-----KVIMFVENRPFNDQRYFLDD 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+KS +GW + E GL K + WY+ + +W + L P Sbjct: 296 EKLKS-LGWAERTPWEEGLKKAMEWYVAKSDYWGDVSGALLP 336 >gi|7657641|ref|NP_055120.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|30173226|sp|O95455|TGDS_HUMAN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|5737699|gb|AAD50061.1|AF048686_1 dTDP-glucose 4,6-dehydratase like protein [Homo sapiens] gi|4128133|emb|CAA06840.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|21708081|gb|AAH33675.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|47118017|gb|AAT11156.1| growth-inhibiting protein 21 [Homo sapiens] gi|55957296|emb|CAI12084.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|55959285|emb|CAI12411.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|119629345|gb|EAX08940.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|119629346|gb|EAX08941.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|189053809|dbj|BAG36061.1| unnamed protein product [Homo sapiens] gi|325464213|gb|ADZ15877.1| TDP-glucose 4,6-dehydratase [synthetic construct] Length = 350 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ + K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEP 347 >gi|155372043|ref|NP_001094629.1| dTDP-D-glucose 4,6-dehydratase [Bos taurus] gi|182701397|sp|A6QLW2|TGDS_BOVIN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|151553768|gb|AAI48107.1| TGDS protein [Bos taurus] gi|296481682|gb|DAA23797.1| TDP-glucose 4,6-dehydratase [Bos taurus] Length = 355 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E V ++ L LI ++ S +E+ + +++DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMS----VLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|296188834|ref|XP_002742523.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Callithrix jacchus] Length = 350 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 128/344 (37%), Positives = 201/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMVVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E I + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVIQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ + K L+P Sbjct: 305 KSEKILG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEP 347 >gi|114650309|ref|XP_522697.2| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Pan troglodytes] Length = 350 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVHAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|297694274|ref|XP_002824410.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Pongo abelii] Length = 350 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|332216591|ref|XP_003257436.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Nomascus leucogenys] Length = 350 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|168046280|ref|XP_001775602.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673020|gb|EDQ59549.1| predicted protein [Physcomitrella patens subsp. patens] Length = 679 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 192/342 (56%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N + +++V+DKL Y NL +L S F F++ DI Sbjct: 15 ILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLFPSKASKNFKFVKGDIGS 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Q Sbjct: 75 ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQI 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 131 K----RFIHVSTDEVYGETEAEAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 186 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A VL Sbjct: 187 CITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFECVLH 246 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IG YNIG ER+ ID+ +I L + KS I+ +++RP +D+RY +D Sbjct: 247 KGVIGNVYNIGTKKERRVIDVAKDICGLFNLDYKKS------IKMVDNRPFNDQRYFLDD 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+ E+GW + + GL KT WY+ + WW + L P Sbjct: 301 KKL-IELGWQERTSWVDGLQKTKDWYMSHPDWWGDVSGALVP 341 >gi|109121066|ref|XP_001083495.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Macaca mulatta] gi|90083092|dbj|BAE90628.1| unnamed protein product [Macaca fascicularis] Length = 350 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 347 >gi|149730447|ref|XP_001491790.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Equus caballus] Length = 414 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 78 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 137 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 138 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 190 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 191 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 247 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 248 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 307 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E V ++ L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 308 GKPGEIYNIGTNFEMS----VLQLAKELIQLIKETSSESEMENWVDYVNDRPTNDMRYPM 363 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 364 KSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEP 406 >gi|303276052|ref|XP_003057320.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461672|gb|EEH58965.1| predicted protein [Micromonas pusilla CCMP1545] Length = 691 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 126/331 (38%), Positives = 189/331 (57%), Gaps = 19/331 (5%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + R+ + V+V+DKL Y NLN+L+EI+ F F++ D+ Sbjct: 28 VLITGGAGFIASHVALRFAKRYPRYNVVVVDKLDYCANLNNLREIAALPNFKFVKADVGS 87 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++E Q D +++FAA++HVD S + EF NI GT +LLE + S Q Sbjct: 88 ADLMTYVMREEQIDTVMHFAAQTHVDNSFGNSFEFTENNIRGTHVLLETVK---SLGDQI 144 Query: 122 KKDQFRFLQISTDEVYGS----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RFL +STDEVYG LDK P++PYSATKA ++ LV+A+G +Y + Sbjct: 145 K----RFLHVSTDEVYGESSYELDKANVEAASLLEPTNPYSATKAGAEMLVMAYGRSYNL 200 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P L++ +N YGP+ +PEK IP I +G + ++GDGQ R +++V+D A +L Sbjct: 201 PYLITRGNNVYGPHQYPEKAIPKFIMLARKGMQIPIHGDGQATRSYMHVDDAASAFDAIL 260 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG YNIG + ER + + +IG L + K +I + DR +DRRY ID Sbjct: 261 HKGSDKGVYNIGAHEERTVLSVAQDIGKSLGVDVSK------MIVHVNDRKFNDRRYFID 314 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 SK+ + +GW + E GL T+ WY N+ Sbjct: 315 CSKLHA-LGWTQNVSWEEGLKGTIEWYTKND 344 >gi|255027551|ref|ZP_05299537.1| hypothetical protein LmonocytFSL_16505 [Listeria monocytogenes FSL J2-003] Length = 204 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/208 (50%), Positives = 151/208 (72%), Gaps = 8/208 (3%) Query: 133 TDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPY 191 TDEVYGSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ V ++ CSNNYGP+ Sbjct: 1 TDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLNVNITRCSNNYGPH 60 Query: 192 HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGN 251 HFPEKLIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ G+ GE YN+GG+ Sbjct: 61 HFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIHNGKSGEVYNVGGH 120 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NER N +IV ++D L + S +++ ++EDR GHD RYAID KI++E+GW P+ Sbjct: 121 NERTNNEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDPKKIETELGWKPKY 173 Query: 312 NMESGLNKTVCWYLDNNWWWRPLYKELK 339 ++G+ +T+ WY++N WWRPL K Sbjct: 174 TFDTGIKETIEWYVNNEAWWRPLKSRAK 201 >gi|319778859|ref|YP_004129772.1| dTDP-glucose 4,6-dehydratase [Taylorella equigenitalis MCE9] gi|317108883|gb|ADU91629.1| dTDP-glucose 4,6-dehydratase [Taylorella equigenitalis MCE9] Length = 499 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 130/332 (39%), Positives = 191/332 (57%), Gaps = 26/332 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 MR++VTGG GFIG + N + +VL +D L+YA I+ N F+ Sbjct: 1 MRVLVTGGCGFIGHHFVDFATNHSSKIYKKVLNLDNLSYAS-------INCPN-GDFILG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD + L+E + D +V+FAA++HVDRSI F+T NI GT LL +C Sbjct: 53 DICDEGLLYKVLREHKIDTLVHFAAQTHVDRSIQNPTPFVTDNIQGTISLL-------TC 105 Query: 118 LSQDKKD---QFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 ++ K+ F+F+ ISTDEVYGS+ + SE P +P +PY+ +KAS++ V AW Sbjct: 106 CTEYIKETGVNFKFVYISTDEVYGSIAPNTSPLSETQPLHPRNPYAVSKASAELFVQAWV 165 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +T+ P +++ SNNYG EK IP I R ++ S + +YG+G R+WL+V D+ A Sbjct: 166 NTFAFPAVITRSSNNYGTGQHTEKFIPKIIDRALKWSSIPIYGNGHASREWLHVLDNCEA 225 Query: 233 LYLVLKKG--RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPG 289 ++ +L G+ +NI ++ NID+ + LD L P S S+ +LI F++DRPG Sbjct: 226 IHGLLTSDIKFKGQVFNITSSDSYTNIDLANMVCEKLDELKPHSKGSYKQLIEFVDDRPG 285 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 HD RYAIDSSKIKS + W P + +N+ V Sbjct: 286 HDMRYAIDSSKIKSTLSWTPTRLIADHINELV 317 >gi|156370929|ref|XP_001628519.1| predicted protein [Nematostella vectensis] gi|156215498|gb|EDO36456.1| predicted protein [Nematostella vectensis] Length = 383 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 123/334 (36%), Positives = 196/334 (58%), Gaps = 26/334 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIGS + LV + V+ +DKL Y +L +LK IS + F++ DIC Sbjct: 18 RILVTGGAGFIGSHVVILLVERYPEYYVINLDKLDYCASLKNLKRISGRPNYKFIEGDIC 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + Q D +++FAA+SHVD S + +F TN+ GT +L+ ++ Sbjct: 78 EANHLKYIFQAEQIDTVLHFAAQSHVDNSFWSSLDFTKTNVYGTHVLIN--------VAH 129 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K + +F+ +STDEVYG S + SE P PS+PY+A+KA+++ +V+++ ++ P Sbjct: 130 EAKIK-KFIHVSTDEVYGGNSSLGDMHSESSPLRPSNPYAASKAAAECIVMSYLESFKFP 188 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ +N YGP+ +PEK+IP IT + F++GDG R++LYV D A +L Sbjct: 189 VIITRSNNVYGPHQYPEKVIPKFITLLNRNRKCFIHGDGSQERNFLYVTDVAEAFLRILH 248 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL------IRFIEDRPGHDR 292 G+ GE YNIG + +I L L+ K L I F++DRP +D+ Sbjct: 249 YGQDGETYNIGS-------EFAIDIMELAKQLVSKIKGEQSLEQFSDHIEFVKDRPFNDK 301 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 RY +DSSK+K+ +GW P+ + E GL +T+ WY D Sbjct: 302 RYPMDSSKVKA-LGWEPKVSWEDGLQRTIDWYAD 334 >gi|168054569|ref|XP_001779703.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668901|gb|EDQ55499.1| predicted protein [Physcomitrella patens subsp. patens] Length = 666 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 128/342 (37%), Positives = 190/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 7 ILITGAAGFIASHVANRLIRNYPHYKIVVLDKLDYCSNLKNLFPSKGSKNFKFVKGDIAS 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Q Sbjct: 67 ADLVNFLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQI 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + E P++PYSATKA ++ LV+A+ +YG+P Sbjct: 123 K----RFIHVSTDEVYGETEVEAIVGNHEASQLLPTNPYSATKAGAEMLVMAYAKSYGLP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A VL Sbjct: 179 CITTRGNNVYGPNQFPEKLIPKFILLAMQGKALPIHGDGSNVRSYLYCEDVAEAFECVLH 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ ID+ ++ L + KS I+ +++RP +D+RY +D Sbjct: 239 KGEVGHVYNIGTKKERRVIDVAKDVCELFNLDYKKS------IKMVDNRPFNDQRYFLDD 292 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+ + +GW + + GL KT WY+ N WW + L P Sbjct: 293 KKLIA-LGWQERTSWAEGLRKTKDWYMSNPDWWGDVSGALVP 333 >gi|168028758|ref|XP_001766894.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681873|gb|EDQ68296.1| predicted protein [Physcomitrella patens subsp. patens] Length = 677 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 130/342 (38%), Positives = 190/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 15 ILITGAAGFIASHVANRLIRNYPHYKIVVLDKLDYCSNLKNLFPSKASKNFKFVKGDIAS 74 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Q Sbjct: 75 ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQI 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 131 K----RFIHVSTDEVYGETEAEAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 186 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A VL Sbjct: 187 CITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFECVLH 246 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG IG YNIG ER+ ID+ +I L + KS I+ +++RP +D+RY +D Sbjct: 247 KGVIGNVYNIGTKKERRVIDVAKDICELFNLDYKKS------IKMVDNRPFNDQRYFLDD 300 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+ ++GW + + GL KT WY + WW + L P Sbjct: 301 KKL-IDLGWQERTSWVDGLQKTKDWYTSHPDWWGDVSGALVP 341 >gi|323454628|gb|EGB10498.1| hypothetical protein AURANDRAFT_23143 [Aureococcus anophagefferens] Length = 337 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 120/324 (37%), Positives = 192/324 (59%), Gaps = 18/324 (5%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 VTGGAGFI S + L V+V D+L Y + +L E+++ + F++ DIC + Sbjct: 1 VTGGAGFIASHVVILLAKKRGPGVIVNFDRLDYCACIENLNEVAKLPNYKFVKGDICSAD 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+ + D I++FAA++HVD S + +F NI+GT +LLE ++ Sbjct: 61 LVNFVLETEEVDTIMHFAAQTHVDNSFGNSFQFTRNNIMGTHVLLEAAKV---------H 111 Query: 124 DQFRFLQISTDEVYG---SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ +STDEVYG +++ ED P++PY+ATKA++++LV ++ ++ +P++ Sbjct: 112 SIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPII 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +N YGP+ FPEKLIP + ++ G V L+G G N R++LYVED RA +L K Sbjct: 172 ITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKA 231 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G+ YNIGG NER N+ + E L ++ S + + LI F+ DR +D RY ID+S+ Sbjct: 232 AVGKIYNIGGCNERSNLSVAKE----LIRIMGLSDNESSLITFVPDRAFNDLRYTIDNSE 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWY 324 + +++GW + E GL TV WY Sbjct: 288 L-AKLGWKELMSWEEGLATTVEWY 310 >gi|301766530|ref|XP_002918693.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Ailuropoda melanoleuca] Length = 356 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 125/344 (36%), Positives = 197/344 (57%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + + D +++FAA++HVD S + A EF N+ GT +L+ + Sbjct: 79 NSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVS---------AA 129 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y P Sbjct: 130 HEAGVEKFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPA 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E V ++ L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMS----VLQLAKELIQLIKETSSESEMENWVDYVNDRPTNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 305 KSEKIHG-LGWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEP 347 >gi|218515718|ref|ZP_03512558.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli 8C-3] Length = 172 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 96/156 (61%), Positives = 117/156 (75%) Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++SNCSNNYGP+HFPEKLIPL I +EG + +YG+G NVRDWLYVEDH RALY + Sbjct: 1 VVVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYSIAS 60 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR GE+YN+GG NER+NID+V I +LD + H LI + DRPGHD RYAID+ Sbjct: 61 TGRPGEKYNVGGRNERRNIDVVHRICAILDGVHSDKAPHARLITNVTDRPGHDARYAIDA 120 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 SK++SE+GW QE E+G+ KTV WYLDN WWWRPL Sbjct: 121 SKLESELGWKAQETFETGIEKTVHWYLDNEWWWRPL 156 >gi|119500660|ref|XP_001267087.1| dtdp-glucose 4,6-dehydratase [Neosartorya fischeri NRRL 181] gi|119415252|gb|EAW25190.1| dtdp-glucose 4,6-dehydratase [Neosartorya fischeri NRRL 181] Length = 411 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/336 (36%), Positives = 193/336 (57%), Gaps = 25/336 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIGS + R+LV ++V DKL Y ++N+++ + F F+ D+ Sbjct: 43 IMVTGGAGFIGSWVARHLVLTYPESYYIVVFDKLDYCSSINNIRMLEAMPNFKFVHGDVT 102 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L + D +++FAA+SHVD S + FI NI GT +LLE R Sbjct: 103 SADDVMRCLHAHKIDVVIHFAAQSHVDLSFRNSYSFIRDNIYGTNVLLESVR-------- 154 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYN----PSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYG + D G ED+P + P++PYSA+KA+++ ++LA+ ++ Sbjct: 155 -QSGIRRFIHVSTDEVYGEVPDDG---EDLPEDSILAPTNPYSASKAAAEMMILAYSKSF 210 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P ++ +N YGP+ FPEK+IP I+ + G + +YGDG N R +L+ D A Sbjct: 211 RLPAIVVRLNNVYGPHQFPEKVIPKFISLLQRGQKLTVYGDGTNSRRYLWAGDAADAFDT 270 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L KG +G+ YN+G +E N+++ ++ + K++ I F EDRP +D RYA Sbjct: 271 ILHKGSVGQIYNVGSKSEITNLELCEKVLSMFGITNTKNW-----IDFTEDRPFNDHRYA 325 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 SK++ +GW Q + E GL KT+ WY D WW Sbjct: 326 TSGSKLQG-LGWKQQTSFEDGLLKTIQWYRDFPDWW 360 >gi|228904957|ref|ZP_04069009.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] gi|228854699|gb|EEM99305.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] Length = 202 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/207 (52%), Positives = 143/207 (69%), Gaps = 8/207 (3%) Query: 127 RFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 +F+QISTDEVYG+L + G F+E P+SPYSA+KAS+D +V A+ T+G+P+ ++ CS Sbjct: 3 KFVQISTDEVYGTLSQTGAFTEHSIIAPNSPYSASKASADLMVRAYHETFGLPMNITRCS 62 Query: 186 NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER 245 NNYGPY F EKLIPL IT + + LYGDG ++RDWL+VEDH A+ LVL G G Sbjct: 63 NNYGPYQFTEKLIPLTITHALNNKDIPLYGDGLHIRDWLHVEDHCVAIDLVLHDGADGHI 122 Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEI 305 YNIGG+NE N+DIV +I L+ K S I FI DR GHDRRYA+D++K+K E+ Sbjct: 123 YNIGGDNEYTNLDIVQKIIKFLN----KDQSQ---ITFISDRLGHDRRYAMDATKLKEEL 175 Query: 306 GWFPQENMESGLNKTVCWYLDNNWWWR 332 GW P ++GL +T+ WY+DN WW Sbjct: 176 GWKPNYLFDAGLTQTIKWYIDNPTWWE 202 >gi|126337543|ref|XP_001377580.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 432 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 127/347 (36%), Positives = 199/347 (57%), Gaps = 26/347 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S L LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 100 RVLVTGGAGFIASHLIVSLVEDYPDYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 159 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 + I+ + D +++FAA++HVD S + A EF N+ GT +L+ E R+ Sbjct: 160 EPHFIKLLFETENIDIVLHFAAQTHVDLSFVHALEFTYVNVYGTHVLVSAAYEARVE--- 216 Query: 118 LSQDKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y Sbjct: 217 ---------KFIYVSTDEVYGGSLDEE-FDESSPKQPTNPYASSKAAAECFVQSYWEQYK 266 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A V Sbjct: 267 FPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYAADVVEAFLTV 326 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRR 293 LKKG+ GE YNIG N E + E L LI ++ S +E+ + +++DRP +D R Sbjct: 327 LKKGKPGEIYNIGTNFEMSIAQLAKE----LIQLIKETNSESEMENWVDYVDDRPSNDMR 382 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 Y + S K+ +GW P+ + + G+ KT+ WY +N W+ K L+P Sbjct: 383 YPMKSEKMHG-LGWRPKVSWKEGIKKTIEWYKENFHNWKNAEKALEP 428 >gi|73989418|ref|XP_542640.2| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Canis familiaris] Length = 514 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 126/344 (36%), Positives = 200/344 (58%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 178 RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 237 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 238 NSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 290 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y P Sbjct: 291 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPA 347 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 348 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 407 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E V ++ L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 408 GKPGEIYNIGTNFEMS----VLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPM 463 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI+ +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 464 KSEKIQG-LGWRPKVPWKEGIKKTIDWYRENFHNWKNAEKALEP 506 >gi|167395152|ref|XP_001741245.1| DTDP-glucose 4,6-dehydratase [Entamoeba dispar SAW760] gi|165894235|gb|EDR22295.1| DTDP-glucose 4,6-dehydratase, putative [Entamoeba dispar SAW760] Length = 342 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 121/331 (36%), Positives = 197/331 (59%), Gaps = 18/331 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + + VN+ + ++ +DKL Y +L +L+EI + + F DI D Sbjct: 8 ILITGGAGFIASHVVIHFVNEYPQCTIINVDKLDYCSSLKNLEEIQDAPNYKFYIADITD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + D +++FAA++HVD S + +F NI GT +LLE + Sbjct: 68 HHTMQKIFEMEHVDTVLHFAAQTHVDNSFGNSFQFTHNNIYGTHVLLEIAK--------- 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ +STDEVYG + +E+ NP++PYSATKA ++++ A+ ++G+P+++ Sbjct: 119 ANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYSATKAGAEFIARAFYQSFGLPLII 178 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N +GP+ FPEKLIP IT + G + L+G G+ R ++YV+D V A L+L+KG Sbjct: 179 TRGNNVFGPHQFPEKLIPKFITLLDRGQNCPLHGCGEEKRSFIYVQDVVNAFDLILRKGI 238 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IG+ YNIG E N ++ LLD +PK + I +++R +D+RY++D SK Sbjct: 239 IGQIYNIGTTREISNNEVAHT---LLDIFQVPKEEQDSR-IYHVKNRCFNDQRYSLDVSK 294 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD--NNW 329 ++ ++GW + E GL KTV WYL+ NNW Sbjct: 295 LE-KLGWRATTSFEEGLKKTVEWYLEHRNNW 324 >gi|330941726|gb|EGH44482.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 191 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/189 (52%), Positives = 132/189 (69%), Gaps = 2/189 (1%) Query: 31 IDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSI 90 +D LTYAGNL +L+ + + F+ +I D + E +P A+V+FAAESHVDRSI Sbjct: 3 LDALTYAGNLANLQSLEGNEQHRFVHGNIGDAALLERLFTEHRPRAVVHFAAESHVDRSI 62 Query: 91 LGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL--DKGLFSED 148 G + F+ TN++GTF LLE R +W+ L K FRFL +STDEVYG+L + F+E Sbjct: 63 TGPEAFVETNVMGTFRLLEAARAYWNGLETTDKAAFRFLHVSTDEVYGTLGANDPAFTET 122 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 PY P+SPYSA+KA+SD+LV ++ HTYG+PVL +NCSNNYGP+HFPEKLIPL I + G Sbjct: 123 TPYQPNSPYSASKAASDHLVRSYHHTYGMPVLTTNCSNNYGPFHFPEKLIPLMIVNALAG 182 Query: 209 SHVFLYGDG 217 + +YGDG Sbjct: 183 KALPVYGDG 191 >gi|168046471|ref|XP_001775697.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672970|gb|EDQ59500.1| predicted protein [Physcomitrella patens subsp. patens] Length = 669 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 128/342 (37%), Positives = 190/342 (55%), Gaps = 19/342 (5%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S + L+ N + +++V+DKL Y NL +L S F F++ DI Sbjct: 11 ILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLFPSRASKNFKFVKGDIGS 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Q Sbjct: 71 ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQI 126 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + E P++PYSATKA ++ LV+A+ +YG+P Sbjct: 127 K----RFIHVSTDEVYGETEAEAIVGNHEASQLLPTNPYSATKAGAEMLVMAYAKSYGLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP FPEKLIP I ++G + ++GDG NVR +LY ED A VL Sbjct: 183 CITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGTNVRSYLYCEDVAEAFECVLH 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G YNIG ER+ +D+ +I L + KS I+ +++RP +D+RY +D Sbjct: 243 KGELGHVYNIGTQRERRVMDVAKDICELFNLDYKKS------IKMVDNRPFNDQRYFLDD 296 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+ + +GW + + GL KT WY N WW + L P Sbjct: 297 KKLIA-LGWQERTSWAEGLQKTKDWYTSNPDWWGDVSGALVP 337 >gi|67482319|ref|XP_656509.1| dTDP-D-glucose 4,6-dehydratase [Entamoeba histolytica HM-1:IMSS] gi|56473710|gb|EAL51122.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica HM-1:IMSS] Length = 342 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 120/331 (36%), Positives = 197/331 (59%), Gaps = 18/331 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + + VN+ + ++ +DKL Y +L +L+EI + + F DI D Sbjct: 8 ILITGGAGFIASHVVIHFVNEYPQCTIINVDKLDYCSSLKNLEEIQDAPNYKFYIADITD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + D +++FAA++HVD S + +F NI GT +LLE + Sbjct: 68 HHTMQKIFEMEHVDTVLHFAAQTHVDNSFGNSFQFTHNNIYGTHVLLEIAK--------- 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ +STDEVYG + +E+ NP++PYSATKA ++++ A+ ++G+P+++ Sbjct: 119 ANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYSATKAGAEFIARAFYQSFGLPLII 178 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N +GP+ FPEKLIP IT + G + L+G G+ R ++YV+D V A +VL+KG Sbjct: 179 TRGNNVFGPHQFPEKLIPKFITLLDRGKNCPLHGCGEEKRSFIYVQDVVNAFDVVLRKGI 238 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G+ YNIG E N ++ LLD +PK + I +++R +D+RY++D SK Sbjct: 239 VGQIYNIGTTREISNNEVAHA---LLDIFQVPKEEQDSR-IYHVKNRCFNDQRYSLDVSK 294 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD--NNW 329 ++ ++GW + E GL KTV WYL+ NNW Sbjct: 295 LE-KLGWRATTSFEEGLKKTVEWYLEHRNNW 324 >gi|189203413|ref|XP_001938042.1| dTDP-D-glucose 4,6-dehydratase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985141|gb|EDU50629.1| dTDP-D-glucose 4,6-dehydratase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 409 Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 129/346 (37%), Positives = 192/346 (55%), Gaps = 16/346 (4%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI R+LV V+ DKL Y LN+ + + + F+F Q DI Sbjct: 61 ILITGGAGFIACWFVRHLVLTYPHYNVVSFDKLDYCATLNNTRILDKHANFTFEQGDITS 120 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ L++ + D I +FAA+SHVD S + EF TN+ GT +LLE R + Sbjct: 121 PTDIKHVLRKHKIDTIFHFAAQSHVDLSFGNSYEFTNTNVYGTHVLLERAREYGIT---- 176 Query: 122 KKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ ISTDEVYG + G SE P++PYSA+KA+++ +V A+ ++ +P+ Sbjct: 177 -----RFIHISTDEVYGDVPVGAADLSETSILAPTNPYSASKAAAEMMVSAYRSSFKLPL 231 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +N YGP+ FPEK+IP I + + L+GDG R ++Y D V AL +L K Sbjct: 232 ITVRANNVYGPHQFPEKIIPKFIMLLQRKQKLLLHGDGSPTRRYIYAGDIVDALDTILHK 291 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G +G+ YNI +E N DI + + D S +E + EDRP +D+RYA D S Sbjct: 292 GDVGQIYNIASKDEISNTDICNRLLDIFDIPHTSSAELSEWVEHTEDRPFNDQRYATDGS 351 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL--DNNWWWRPLYKELKPDND 343 K+ + +GW P+ + E GL TV WYL N W + +++L P +D Sbjct: 352 KLTA-LGWQPKTSFEEGLKITVDWYLVAGNEIWTKEEHEDL-PSSD 395 >gi|296419950|ref|XP_002839554.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635716|emb|CAZ83745.1| unnamed protein product [Tuber melanosporum] Length = 389 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 121/341 (35%), Positives = 199/341 (58%), Gaps = 32/341 (9%) Query: 3 LIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI L R+L + + ++ DKL Y +LN+ + +S + F+F+ DI Sbjct: 39 ILITGGAGFIACWLVRHLTLTYPEYNIISYDKLDYCASLNNTRCLSTAPNFTFVHGDITS 98 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++A +++ D + +FAA+SHVD S + EF +TN+ GT +LLE +++ Sbjct: 99 PEEVQNAFRKYNIDTVFHFAAQSHVDLSFGNSYEFTSTNVYGTHVLLE--------CAKN 150 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYN----PSSPYSATKASSDYLVLAWGHTYGI 177 RF+ ISTDEVYG +D+ ED+ P++PY+A+KA+++ LV ++ ++ + Sbjct: 151 HGSLKRFIHISTDEVYGEVDED--GEDLIEQSILAPTNPYAASKAAAEMLVHSYYKSFKL 208 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV++ +N YGP+ FPEK+IP + G + L+GDG++ R +L+ D A +L Sbjct: 209 PVIIVRSNNVYGPHQFPEKVIPKFSCLLHRGEKLLLHGDGKHTRRYLFAGDAADAFDTIL 268 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIE---DRPGHD 291 KG IG+ YN+G +E N+++ AL+ K + H + F+E DRP +D Sbjct: 269 HKGLIGQIYNVGSTDEISNLELC--------ALLLKQFGHDPAVDFDSFVEHTIDRPFND 320 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY--LDNNWW 330 RRYA+D++K+KS +GW + GL TV WY + WW Sbjct: 321 RRYAVDATKLKS-LGWVQKTTFAEGLKATVDWYRKFGSEWW 360 >gi|224002825|ref|XP_002291084.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] gi|220972860|gb|EED91191.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] Length = 361 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 121/326 (37%), Positives = 188/326 (57%), Gaps = 17/326 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFIGS + L ++V DKL Y L +L E+S+ F F++ DI Sbjct: 16 ILLTGGAGFIGSHVAILLAKKYPHYNIVVYDKLDYCSCLANLDEVSRLKNFKFVKGDITS 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + E D +++FAA++HVD S + F +NI GT ++LE + C Sbjct: 76 PDLVSYVMVEEDIDTVMHFAAQTHVDNSFGNSFNFTQSNIYGTHVMLEAAK----C---- 127 Query: 122 KKDQFRFLQISTDEVYG---SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ +STDEVYG + + E+ P++PY+ATKA +++LV ++ ++ +P Sbjct: 128 HRGMKRFIHVSTDEVYGEGETFETEAMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLP 187 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +++ +N YGP+ FPEKLIP +++ G V L+GDG N R++LYVED RA +++ Sbjct: 188 CVITRGNNVYGPHQFPEKLIPKFTNQILRGRPVTLHGDGSNTRNFLYVEDVARAFEVLVH 247 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 K G YNIGG+NE N+ E+ L ++ K ELI F+ DR +D RY I+S Sbjct: 248 KASPGMIYNIGGDNEISNL----EVAKKLIEILGKGDQMDELITFVPDRKFNDLRYTINS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 K+ ++GW + N E GL TV WY Sbjct: 304 GKLH-KLGWKEEMNWEEGLRTTVEWY 328 >gi|225579052|ref|NP_083854.3| dTDP-D-glucose 4,6-dehydratase [Mus musculus] gi|74178557|dbj|BAE32527.1| unnamed protein product [Mus musculus] Length = 355 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 194/344 (56%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAY-------- 130 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 131 -EAGVEKFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VL K Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G GE YNIG N E + + E L LI ++ S +E + ++ DRP +D RY + Sbjct: 249 GEPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESETESWVDYVSDRPHNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI S +GW P+ E G+ KTV WY N W+ K L+P Sbjct: 305 KSEKIHS-LGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEP 347 >gi|148668237|gb|EDL00567.1| TDP-glucose 4,6-dehydratase, isoform CRA_d [Mus musculus] Length = 357 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/344 (36%), Positives = 194/344 (56%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ +S + F+Q DIC Sbjct: 21 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 80 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 81 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAY-------- 132 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 133 -EAGVEKFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 190 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VL K Sbjct: 191 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTK 250 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G GE YNIG N E + + E L LI ++ S +E + ++ DRP +D RY + Sbjct: 251 GEPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESETESWVDYVSDRPHNDMRYPM 306 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI S +GW P+ E G+ KTV WY N W+ K L+P Sbjct: 307 KSEKIHS-LGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEP 349 >gi|50730649|ref|XP_416988.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Gallus gallus] Length = 357 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 198/343 (57%), Gaps = 18/343 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFI S + LV + +++ +DKL Y +L +L+ +S+ + F+Q DIC Sbjct: 16 RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I+ + + D +++FAA++HVD S A EF N+ GT +L+ + Sbjct: 76 EPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLV---------AAA 126 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + +F+ +STDEVYG F E P P++PY+++KA+++ V ++ Y PV+ Sbjct: 127 HEANVEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVV 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ +PEK+IP I+ + + ++G G R++LY D V A VLK+G Sbjct: 187 ITRSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAID 297 + GE YNIG N E + + E L LI K+ S +E+ + +++DRP +D RY + Sbjct: 247 KPGEIYNIGTNFEMSIVQLAKE----LIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMS 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ + +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 303 SEKMHN-LGWRPKVPWKEGIKKTIEWYKENFHNWKNAEKALEP 344 >gi|326913956|ref|XP_003203297.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Meleagris gallopavo] Length = 357 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 121/343 (35%), Positives = 199/343 (58%), Gaps = 18/343 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL+VTGGAGFI S + LV + +++ +DKL Y +L +L+ +S+ + F+Q DIC Sbjct: 16 RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I+ + + D +++FAA++HVD S A EF N+ GT +L+ + Sbjct: 76 KPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLV--------AAAH 127 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + +F+ +STDEVYG F E P P++PY+++KA+++ V ++ Y PV+ Sbjct: 128 EAKVE-KFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVV 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ +PEK+IP I+ + + ++G G R++LY D V A VLK+G Sbjct: 187 ITRSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAID 297 + GE YNIG N E + + E L LI K+ S +E+ + +++DRP +D RY ++ Sbjct: 247 KPGEIYNIGTNFEMSIVQLAKE----LIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMN 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ + +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 303 SEKMHN-LGWRPKVPWKEGIKKTIEWYKENFHNWKNAEKALEP 344 >gi|30173340|sp|Q8VDR7|TGDS_MOUSE RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|18204038|gb|AAH21419.1| TDP-glucose 4,6-dehydratase [Mus musculus] Length = 355 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 126/344 (36%), Positives = 194/344 (56%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAY-------- 130 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 131 -EAGVEKFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PE++IP I+ + ++G G R++LY D V A VL K Sbjct: 189 VITRSSNVYGPHQYPERVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G GE YNIG N E + + E L LI ++ S +E + ++ DRP +D RY + Sbjct: 249 GEPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESETESWVDYVSDRPHNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S KI S +GW P+ E G+ KTV WY N W+ K L+P Sbjct: 305 KSEKIHS-LGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEP 347 >gi|134082868|emb|CAK42698.1| unnamed protein product [Aspergillus niger] Length = 362 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/338 (34%), Positives = 195/338 (57%), Gaps = 18/338 (5%) Query: 3 LIVTGGAGFIGSALCRYL--VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG R+L V K VL D L Y + + + + F F D+C Sbjct: 25 ILVTGGAGFIGGWFVRHLLQVYGTKYTVLCFDILDYCASKRNFQPVEHLPNFHFFPGDLC 84 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + + ++F+ DA+V+FAA SHVD+S++ F +N+ GT +LLE R + + Sbjct: 85 DRDRVTALFQQFKVDAVVHFAANSHVDQSLVNPLSFTRSNVTGTHVLLEAARQAGTVI-- 142 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ ISTDEVYG G F+E+ NP++PYSA+KA+++ + ++ +++ + Sbjct: 143 ------RFIHISTDEVYGGNMPGQDYAFTEEDQLNPTNPYSASKAAAEMIANSYRYSFHM 196 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P++++ C+N +GP +PEKLIP +M+ + L+G G+ VR ++YV D + A ++L Sbjct: 197 PIIITRCNNVFGPCQYPEKLIPKFAMQMLRSQRMTLHGQGEAVRGFVYVSDAMSAFDIIL 256 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G + E YNI + K +D+ I A+ +S + + + + DRP +DR Y + Sbjct: 257 HRGLVSETYNISSKEQIKVVDVAKRIIQWFHAV--QSDTCEQYLETVADRPFNDRMYWTN 314 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN--NWWWRP 333 SK++ ++GW + + + GL T+ WY D+ +W P Sbjct: 315 DSKLR-QLGWTEKVSFDEGLIMTLEWYRDHGETFWSGP 351 >gi|327482469|gb|AEA85779.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 183 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/163 (60%), Positives = 121/163 (74%), Gaps = 2/163 (1%) Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ HTYG+PVL +NCSNNYGPYHFPEKLIPL I + G + +YGDG+ VRDWLYV+DH Sbjct: 3 AYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALAGKTLPIYGDGRQVRDWLYVKDH 62 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDR 287 AL VL KG GE YNIGG NER N+ +V + +LD PK+ S++E I F++DR Sbjct: 63 CAALRCVLAKGMPGETYNIGGCNERTNLQVVSTLCGILDKEHPKTTGGSYSEQIEFVKDR 122 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAIDSSKI+ E+GW P ++ ESG+ KTV WYLDN W Sbjct: 123 PGHDRRYAIDSSKIQRELGWAPADSFESGIRKTVSWYLDNQEW 165 >gi|298480818|ref|ZP_06999013.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] gi|298272841|gb|EFI14407.1| dTDP-glucose 4,6-dehydratase [Bacteroides sp. D22] Length = 231 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 106/203 (52%), Positives = 134/203 (66%), Gaps = 4/203 (1%) Query: 129 LQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNY 188 L IS EVYG F E YNP SPYSA+KA SD+ V A+ TY +P +++NCSNNY Sbjct: 12 LDISVHEVYGD---EFFKETTKYNPHSPYSASKAGSDHFVRAFHDTYAMPTIVTNCSNNY 68 Query: 189 GPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNI 248 G Y FPEKLIPL I + + +YG G+NVRDWLYV DH RA+ ++ G++ + YNI Sbjct: 69 GSYQFPEKLIPLFINNIRHRKPLPVYGKGENVRDWLYVVDHARAIDVIFHNGKVADTYNI 128 Query: 249 GGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 GG NE KNIDI+ I +D L+ H+ ELI ++ DR GHD RYAIDS+K+K+E+GW Sbjct: 129 GGFNEWKNIDIIHVIIKTVDRLLGNPEGHSEELITYVMDRMGHDLRYAIDSTKLKNELGW 188 Query: 308 FPQENMESGLNKTVCWYLDNNWW 330 P E G+ KTV WYLDN W Sbjct: 189 EPSLQFEEGIEKTVQWYLDNQEW 211 >gi|152993139|ref|YP_001358860.1| dTDP-glucose 4,6-dehydratase [Sulfurovum sp. NBC37-1] gi|151425000|dbj|BAF72503.1| dTDP-glucose 4,6-dehydratase [Sulfurovum sp. NBC37-1] Length = 469 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 107/231 (46%), Positives = 144/231 (62%), Gaps = 31/231 (13%) Query: 127 RFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 RF ISTDEVYG+L LF+E+ PY P+SPYSA+KASSD +V ++ TYG+ +++N Sbjct: 229 RFHHISTDEVYGTLSDDPDDLFTEETPYAPNSPYSASKASSDMIVRSYVETYGMDCVITN 288 Query: 184 CSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIG 243 CSNNYGP EKLIP I + + G + +YGDG+N+RDWLYV DH + + L G+ G Sbjct: 289 CSNNYGPKQHDEKLIPTIIRKALVGESIPIYGDGKNIRDWLYVLDHCKGIDLAYHTGKKG 348 Query: 244 ERYNIGGNNERKNIDIVFEIGFLLDALIPKSY---------------------------- 275 E YNIGG NER N+ IV I +LD IP Sbjct: 349 EVYNIGGRNERTNLQIVDRICEILDEKIPPQTNSKLLALNGDTPVSKEQEGCNTKHLTLK 408 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 S+ +L+ F++DR GHDRRYAID++KI++E+GW E+ +SG+ KTV WYL+ Sbjct: 409 SYKDLVTFVDDRAGHDRRYAIDATKIENELGWKADEDFDSGIVKTVEWYLE 459 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 36/169 (21%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEIS-------------- 47 ++VTG AGFIGS Y + +++ +D LTYAGNL++LKE+ Sbjct: 14 ILVTGCAGFIGSNFVPYFLEKYPNYRIVNLDLLTYAGNLDNLKEVEDILNNNSTLLALNA 73 Query: 48 ------------------QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRS 89 Q++ + F++ +IC+RE + E+ A+++FAAESHVD S Sbjct: 74 DTPVSKEQEGCNTQHSTLQNDRYHFVKGNICNRELVEFIFNEYDVQAVIHFAAESHVDNS 133 Query: 90 ILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ-ISTDEVY 137 I F+ TN+ GTF LL+ +W + + K + R+++ + +DE + Sbjct: 134 IKNPGVFVETNVNGTFTLLDVAYKYW--MEKPFKYRERYMEGVFSDECF 180 >gi|302844237|ref|XP_002953659.1| hypothetical protein VOLCADRAFT_82358 [Volvox carteri f. nagariensis] gi|300261068|gb|EFJ45283.1| hypothetical protein VOLCADRAFT_82358 [Volvox carteri f. nagariensis] Length = 366 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 125/346 (36%), Positives = 195/346 (56%), Gaps = 24/346 (6%) Query: 3 LIVTGGAGFIGS-ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + R + +V+V+DKL Y ++N+L ++ F ++ DI Sbjct: 19 ILITGGAGFIASHVVIRIATRYPEYKVVVLDKLDYCASVNNLSCLADKPNFRLIKGDIQS 78 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I LK + D +++FAA++HVD S + F N GT +LLE +R+ + Sbjct: 79 MDLISYILKTEEIDTVMHFAAQTHVDNSFGNSLAFTLNNTYGTHVLLEASRMAGTIR--- 135 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS---EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG G + E +P++PYSA KA ++ + A+ +Y +P Sbjct: 136 -----RFINVSTDEVYGETSLGKTTGLVESSHLDPTNPYSAAKAGAELIARAYITSYKMP 190 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ +N YGP+ FPEKLIP G + L+GDG +VR +LYVED A VL Sbjct: 191 VIITRGNNVYGPHQFPEKLIPKFTLLAARGKELPLHGDGSSVRSYLYVEDVAEAFDCVLH 250 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YNIG + ER +++ +I L + +P+ + + F++DR +DRRY I S Sbjct: 251 KGVTGETYNIGTDRERSVLEVARDIAKLFN--LPE-----DKVVFVKDRAFNDRRYYIGS 303 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD----NNWWWRPLYKELKP 340 +K+ + +GW + + E GL KTV WYL N+W + L+P Sbjct: 304 AKLAA-LGWQERTSWEEGLRKTVDWYLGLKNIENYWAGDIEMALRP 348 >gi|155371491|ref|YP_001427025.1| hypothetical protein ATCV1_Z544R [Acanthocystis turfacea Chlorella virus 1] gi|155124811|gb|ABT16678.1| hypothetical protein ATCV1_Z544R [Acanthocystis turfacea Chlorella virus 1] Length = 350 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 119/329 (36%), Positives = 184/329 (55%), Gaps = 19/329 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + LV + +V+V+DK+ Y LN+L + + F F++ DI Sbjct: 11 VLVTGGAGFIGSHVVMKLVQRYPECKVVVLDKMDYCATLNNLATVRDAPNFKFVKGDIQS 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + LK+ + D I++FAA++HVD S + F N+ GT +LLE RL+ Sbjct: 71 TDLLAHVLKQEKIDTIMHFAAQTHVDNSFGNSLAFTMNNVYGTHVLLECARLYGGVQ--- 127 Query: 122 KKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG G E P++PY+A KA ++ + A+ +Y +P Sbjct: 128 -----RFINVSTDEVYGESSLGKKEGLDEHSSLEPTNPYAAAKAGAEMMARAYHTSYKLP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ +N YGP+ FPEK+IP I R G + ++GDG +R +LYV+D A +L Sbjct: 183 VIVTRGNNVYGPHQFPEKMIPKFILRATRGLDLPIHGDGGALRSYLYVDDVAEAYITILL 242 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +GE YNIG ER +D+ +I + + + H ++DR +DRRY I Sbjct: 243 KGNVGETYNIGTQKERSVVDVAHDICKIFNRDSDTAIWH------VKDRAFNDRRYFISD 296 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ ++GW + E GL +TV WYL + Sbjct: 297 KKL-LDLGWQEKTTWEDGLKQTVGWYLQH 324 >gi|300122243|emb|CBK22816.2| unnamed protein product [Blastocystis hominis] Length = 464 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 115/321 (35%), Positives = 189/321 (58%), Gaps = 17/321 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + LVN + +++ +D L Y G LN+LKE+ + F++ +I Sbjct: 12 ILITGGAGFIASHVVTLLVNKYPQYKIVNLDCLDYCGTLNNLKEVENKPNYKFVEGNIMS 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R LK + D +++FAA+SHVD S + F N++GT ++LE RL Sbjct: 72 SCFVRYVLKSEEIDTVIHFAAQSHVDNSYGNSLTFTYNNVVGTHVMLEACRLHGIK---- 127 Query: 122 KKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ +STDEVYG G +E NP++PY+ATKA+++++V + H+Y +P+ Sbjct: 128 -----RFIHVSTDEVYGEQQDGQENVTETALLNPTNPYAATKAAAEFIVKGYQHSYKMPI 182 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +N YGP+ +PEK+IP I + G + ++G G N+R +LYV D +A L+L K Sbjct: 183 IITRSNNVYGPHQYPEKVIPKFINLVKRGRPMTIHGKGNNLRTFLYVRDIAKAFDLILHK 242 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GR E YNI G +E V E+ ++ L+ E I++++DR +D RYAID Sbjct: 243 GRTDELYNIAGRSEV----TVHEVARVIWRLMGMEGDVEEHIQYVKDREFNDYRYAIDGR 298 Query: 300 KIKSEIGWFPQENMESGLNKT 320 K++ ++GW + + E G+ +T Sbjct: 299 KLE-KLGWKAETDFEDGMKET 318 >gi|224823818|ref|ZP_03696927.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] gi|224604273|gb|EEG10447.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] Length = 186 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 95/163 (58%), Positives = 121/163 (74%), Gaps = 2/163 (1%) Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW HTYG+PVL +NCSNNYGPYHFPEKLIPL I + G + +YGDGQ VRDWLYV+DH Sbjct: 3 AWHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQVRDWLYVKDH 62 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS--YSHTELIRFIEDR 287 A+ VL+ GR+G+ YN+GG NE+ N+++V I +LD L P + S+T I F++DR Sbjct: 63 CSAIRRVLEAGRLGQTYNVGGWNEKPNLEVVHTICAILDELQPHADGESYTGQISFVQDR 122 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 PGHDRRYAID+ K++ E+GW P E E+G+ KTV WYLDN W Sbjct: 123 PGHDRRYAIDARKLERELGWKPAETFETGIRKTVQWYLDNQTW 165 >gi|224043150|ref|XP_002196929.1| PREDICTED: similar to TDP-glucose 4,6-dehydratase [Taeniopygia guttata] Length = 354 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 196/343 (57%), Gaps = 18/343 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV + +++ +DKL Y +L +L+ +S + F+Q DIC Sbjct: 13 RVLVTGGAGFIASHVIVSLVKNYPNYLIINLDKLDYCASLKNLETVSGKENYKFIQGDIC 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I+ + + D + +FAA++HVD S A EF N+ GT +L+ + Sbjct: 73 EPDFIKQLFETEKIDIVFHFAAQTHVDLSFWHALEFTYVNVYGTNVLV---------AAA 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + +F+ +STDEVYG F E P P++PY+++KA+++ V ++ Y PV+ Sbjct: 124 HEANVEKFVYVSTDEVYGGSTDEEFDESSPKRPTNPYASSKAAAECFVQSYWERYQFPVV 183 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ +PEK+IP I+ + + ++G G R++LY D V A VLK+G Sbjct: 184 ITRSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEG 243 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR---FIEDRPGHDRRYAID 297 + GE YNIG N E + E L LI K+ S +E+ R +++DRP +D RY + Sbjct: 244 KPGEIYNIGTNFEMSIAQLAKE----LIHLIKKTSSESEMERWMDYVKDRPTNDLRYPMS 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ + +GW P+ + G+ KT+ WY +N W+ K L+P Sbjct: 300 SEKMHN-LGWRPKVPWKEGITKTIEWYRENFHNWKNSEKALEP 341 >gi|167385482|ref|XP_001737366.1| DTDP-glucose 4,6-dehydratase [Entamoeba dispar SAW760] gi|165899884|gb|EDR26373.1| DTDP-glucose 4,6-dehydratase, putative [Entamoeba dispar SAW760] Length = 341 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/340 (34%), Positives = 200/340 (58%), Gaps = 16/340 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + + V +++ +DKL Y +L +L+EI + + F DI D Sbjct: 10 ILITGGAGFIASHIVIHFVKRYPDCRIVNVDKLDYCSSLKNLEEIQDAPNYKFYIADITD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + D +++FAA++HVD S + +F NI GT +LLE ++ +Q Sbjct: 70 PHTVQKIFEMEHVDTVLHFAAQTHVDNSFGNSFQFTHNNIYGTHVLLEVSKA-----NQI 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ +STDEVYG + +E+ NP++PY+ATKA ++++ ++ ++G+P+++ Sbjct: 125 K----RFIHVSTDEVYGQVIGNAATENSLLNPTNPYAATKAGAEFIARSFYQSFGLPLII 180 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N +GP+ FPEKLIP IT + G + ++G G+ R ++YV+D V A ++L+KG Sbjct: 181 TRGNNVFGPHQFPEKLIPKFITLLDRGQNCPIHGSGEEKRSFIYVQDVVNAFDVILRKGV 240 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G+ YNIG E N ++ LLD +PK + I +E+R +D+RY++D SK Sbjct: 241 VGQIYNIGTTREISNNEVAHT---LLDIFQVPKEKQDSR-IYHVENRCFNDQRYSLDVSK 296 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 ++ ++GW + E GL KTV WY + W + + L P Sbjct: 297 LE-KLGWKTTTSFEEGLKKTVEWYSKHRNNWERIDEALVP 335 >gi|255073829|ref|XP_002500589.1| predicted protein [Micromonas sp. RCC299] gi|226515852|gb|ACO61847.1| predicted protein [Micromonas sp. RCC299] Length = 682 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 126/366 (34%), Positives = 197/366 (53%), Gaps = 30/366 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + + +V+V+DKL Y NLN+L+ I+ F F++ D+ Sbjct: 17 VLITGGAGFIASHVAILFAKKYPQYKVVVVDKLDYCANLNNLRSIAGLLNFKFVKGDVGS 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++ + D +++FAA++HVD S + EF NI GT +LLE + + Sbjct: 77 ADLMTYVMRSEEIDTVMHFAAQTHVDNSFGNSFEFTENNIRGTHVLLETVKTLGTIK--- 133 Query: 122 KKDQFRFLQISTDEVYGS----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RFL +STDEVYG D+ P++PYSATKA ++ LV+A+G +Y + Sbjct: 134 -----RFLHVSTDEVYGESSYEKDEANVEAASLLEPTNPYSATKAGAEMLVMAYGRSYNL 188 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++ +N YGP+ +PEK IP I G + ++GDG R +++V D A +L Sbjct: 189 PYIITRGNNVYGPHQYPEKAIPKFIMLAQSGGTIPIHGDGMATRSYMHVYDAASAFDTIL 248 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG I YNIG + ER + + +IG L I K+ H + DR +DRRY ID Sbjct: 249 HKGAIKGVYNIGAHEERTVLSVAQDIGKSLGKDISKTIVH------VSDRKFNDRRYFID 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN---NWWWRPLYKEL-------KPDNDYSKW 347 SK+ + +GW Q + E GL +T+ WY +N + +W L L KP + + Sbjct: 303 CSKLLA-LGWTQQVSWEEGLKETIDWYTNNGQASGYWGNLSGALVAHPTGGKPQLEGEVY 361 Query: 348 KNLNEM 353 ++L EM Sbjct: 362 QSLEEM 367 >gi|255018597|ref|ZP_05290723.1| hypothetical protein LmonF_14391 [Listeria monocytogenes FSL F2-515] Length = 199 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 101/203 (49%), Positives = 146/203 (71%), Gaps = 8/203 (3%) Query: 138 GSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK 196 GSL + G F+E+ P P+SPYSA+KAS+D LV ++ TYG+ V ++ CSNNYGP+HFPEK Sbjct: 1 GSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLNVNITRCSNNYGPHHFPEK 60 Query: 197 LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKN 256 LIPL IT ++G ++ +YGDG+N+RDWL+V DH A+ LV+ G+ GE YN+GG+NER N Sbjct: 61 LIPLMITNGLDGENLPIYGDGKNIRDWLHVSDHCAAIDLVIHNGKSGEVYNVGGHNERTN 120 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +IV ++D L + S +++ ++EDR GHD RYAID KI++E+GW P+ ++G Sbjct: 121 NEIVH---IIVDDL---NLSKDKIV-YVEDRLGHDLRYAIDPKKIETELGWEPKYTFDTG 173 Query: 317 LNKTVCWYLDNNWWWRPLYKELK 339 + +T+ WY++N WWRPL K Sbjct: 174 IKETIEWYVNNEAWWRPLKSRAK 196 >gi|327267849|ref|XP_003218711.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Anolis carolinensis] Length = 352 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 121/341 (35%), Positives = 197/341 (57%), Gaps = 14/341 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV +++ +DKL Y +L +L+ +S+ + + F+Q DIC Sbjct: 16 RVLVTGGAGFIASHVVVSLVEKYPNYMIINLDKLDYCAHLKNLETVSEKHNYKFVQGDIC 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I+ + + D +++FAA++HVD S L + EF NI GT+IL+ + Sbjct: 76 ELNFIKELFETEKIDIVLHFAAQTHVDASFLHSLEFNYVNIYGTYILV-------GAAYE 128 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + +F+ +STDEVYG F E P P++PY+++KA ++ V ++ Y PV+ Sbjct: 129 AKVE--KFIYVSTDEVYGGSCDQEFDELSPKKPTNPYASSKAIAECFVQSYWEKYKFPVI 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ FPEK+IP I+ + + ++G G R++LY D A +LKKG Sbjct: 187 ITRSSNVYGPHQFPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYASDAADAFLTILKKG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAIDSS 299 + GE YNIG N+E + E+ L+ S + TE I ++EDRP +D Y ++S Sbjct: 247 QPGEIYNIGTNSEISITQLAKELIHLIKNT--GSDAETEYWIDYVEDRPTNDLGYPMNSG 304 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+ ++GW P+ + G+ KT+ WY +N + W+ K L+P Sbjct: 305 KM-YDLGWRPKVPWKEGIKKTIEWYQENFYNWKNAEKALEP 344 >gi|330915792|ref|XP_003297172.1| hypothetical protein PTT_07488 [Pyrenophora teres f. teres 0-1] gi|311330306|gb|EFQ94733.1| hypothetical protein PTT_07488 [Pyrenophora teres f. teres 0-1] Length = 715 Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 129/336 (38%), Positives = 185/336 (55%), Gaps = 21/336 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI R+LV V+ DKL Y LN+ + + + F+F Q DI Sbjct: 348 ILITGGAGFIACWFVRHLVLTYPHYNVVSFDKLDYCATLNNTRILDKHANFTFEQGDITW 407 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ L++ + D I +FAA+SHVD S + EF TN+ GT +LLE R Sbjct: 408 PTDIKHVLRKHKIDTIFHFAAQSHVDLSFGNSYEFTNTNVYGTHVLLERAR--------- 458 Query: 122 KKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ ISTDEVYG + G SE P++PYSA+KA+++ +V A+ ++ +P+ Sbjct: 459 EHGITRFIHISTDEVYGDVPVGAADLSETSILAPTNPYSASKAAAEMMVSAYRSSFKLPL 518 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +N YGP+ FPEK+IP I + + L+GDG R +LY D V AL +L K Sbjct: 519 ITVRANNVYGPHQFPEKIIPKFIMLLQRKQKLLLHGDGSPTRRYLYAGDIVDALDTILHK 578 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI---EDRPGHDRRYAI 296 G +G+ YNI +E N DI LLD S EL +++ EDRP +D+RYA Sbjct: 579 GDVGQIYNIASKDEISNADICNR---LLDIFAIPHTSPAELSKWVEHTEDRPFNDQRYAT 635 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY--LDNNWW 330 D SK+ + +GW P+ + E GL TV WY WW Sbjct: 636 DGSKLTA-LGWQPKTSFEEGLKITVDWYRRFGETWW 670 >gi|9714085|emb|CAC01395.1| dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] Length = 233 Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 110/233 (47%), Positives = 154/233 (66%), Gaps = 5/233 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA ++++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPNAKIINLDFLTYASDISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVSLVGEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD+F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 121 FLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNSPYSASKASADMLVRSYHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 G+ ++SNCSNNYGP+ EKLIP I + + + +YGDG+N+RDWLYV+D Sbjct: 181 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNETPIPIYGDGKNIRDWLYVKD 233 >gi|219121781|ref|XP_002181238.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407224|gb|EEC47161.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 437 Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 120/326 (36%), Positives = 187/326 (57%), Gaps = 17/326 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFI S + L + +++V D L Y L +L+E+ F F++ DI Sbjct: 83 ILVTGGAGFIASHVAILLCKKYPQYKIVVYDCLDYCACLANLQELFDLPNFKFVKGDIAS 142 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+E + D I++FAA++HVD S + F TNI GT +LLE + C Sbjct: 143 PDLVSYVLREEKIDTILHFAAQTHVDNSFGNSFAFTQTNIYGTHVLLESAK----CCDTL 198 Query: 122 KKDQFRFLQISTDEVYGS---LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ +STDEVYG + SE+ P++PY+ATKA +++LV ++ ++ +P Sbjct: 199 R----RFVHVSTDEVYGEGEDFETDPMSEEHVLEPTNPYAATKAGAEFLVKSYFRSFQLP 254 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L++ +N YGP+ FPEKLIP ++++ + ++GDG N R++LYV D A +++ Sbjct: 255 CLITRGNNVYGPHQFPEKLIPKFTNQLLKNLPLTIHGDGSNTRNFLYVTDVANAFDIIMH 314 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG G YNIGG NE N+++ + L D K LI+F+ DR +D RY I+S Sbjct: 315 KGTPGHVYNIGGKNEVPNLEVARALLKLFD----KEKEEDTLIKFVPDRRFNDLRYTINS 370 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 +K+ E+GW + E GL TV WY Sbjct: 371 NKLH-ELGWTELMSWEEGLATTVDWY 395 >gi|83589035|ref|YP_429044.1| NAD-dependent epimerase/dehydratase [Moorella thermoacetica ATCC 39073] gi|83571949|gb|ABC18501.1| NAD-dependent epimerase/dehydratase [Moorella thermoacetica ATCC 39073] Length = 254 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 112/196 (57%), Positives = 142/196 (72%), Gaps = 8/196 (4%) Query: 133 TDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPY 191 TDEVYGSL +G F+E P NPSSPYSA+KA++D L LA+ TY +PV+++ CSNNYGPY Sbjct: 12 TDEVYGSLGAEGYFTEISPLNPSSPYSASKAAADLLALAYYKTYNLPVIVTRCSNNYGPY 71 Query: 192 HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGN 251 FPEKLIPL IT +E + +YGDG NVRDWL+V DH AL LVL KGR G+ YNIG N Sbjct: 72 QFPEKLIPLMITNALEDRPLPVYGDGLNVRDWLHVRDHCIALDLVLHKGRPGQVYNIGDN 131 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NER NI+IV + L + P+S LI F++DRPGHDRRYAID++++ E+GW P Sbjct: 132 NERTNIEIVRRV--LRELGKPES-----LITFVQDRPGHDRRYAIDATRLLRELGWQPAY 184 Query: 312 NMESGLNKTVCWYLDN 327 + E GL +T+ WY +N Sbjct: 185 DFEQGLKETIRWYCEN 200 >gi|67473445|ref|XP_652489.1| dTDP-D-glucose 4,6-dehydratase [Entamoeba histolytica HM-1:IMSS] gi|56469346|gb|EAL47103.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica HM-1:IMSS] Length = 341 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 117/331 (35%), Positives = 194/331 (58%), Gaps = 18/331 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + + V +++ +DKL Y +L SL+ I + + F DI D Sbjct: 10 ILITGGAGFIASHVVIHFVKHYPQCIIINVDKLDYCSSLKSLEGIQDAPNYKFYIADITD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + D +++FAA++HVD S + +F NI GT +LLE ++ Sbjct: 70 PHTMQKIFEIEHVDTVLHFAAQTHVDNSFGNSFQFTHNNIYGTHVLLEVSK--------- 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ +STDEVYG + +E+ NP++PY+ATKA ++++ ++ ++G+P+++ Sbjct: 121 ANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYAATKAGAEFIARSFYQSFGLPLII 180 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N +GP+ FPEKLIP IT + G + ++G G+ R ++YV+D V A +VL+KG Sbjct: 181 TRGNNVFGPHQFPEKLIPKFITLLDRGKNCPIHGSGEEKRSFIYVQDVVNAFDVVLRKGI 240 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G+ YNIG E N ++ LLD +PK + I +E+R +D+RY++D SK Sbjct: 241 VGQIYNIGTTREISNNEVAHA---LLDIFQVPKEEQDSR-IYHVENRCFNDQRYSLDVSK 296 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLD--NNW 329 ++ ++GW + E GL KTV WYL NNW Sbjct: 297 LE-KLGWRATTSFEEGLKKTVEWYLGHRNNW 326 >gi|312215728|emb|CBX95680.1| hypothetical protein [Leptosphaeria maculans] Length = 443 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 129/348 (37%), Positives = 187/348 (53%), Gaps = 26/348 (7%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFI R+LV +V+ DKL Y LN+ + + F F Q D+ Sbjct: 61 ILVTGGAGFIACWFVRHLVLTYTHYRVVSFDKLDYCATLNNTRILHDRPNFVFEQGDVTS 120 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ L+++ D I +FAA+SHVD S + EF TN+ GT +LLE R Sbjct: 121 PATVKRVLRKYNIDTIFHFAAQSHVDLSFGNSYEFTNTNVYGTHVLLERAR--------- 171 Query: 122 KKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ +STDEVYG ++ G SE P++PYSA+KA+++ +V A+ ++ +P+ Sbjct: 172 EHGVDRFVHMSTDEVYGDVEVGAADLSEASILAPTNPYSASKAAAEMMVSAYRSSFKLPL 231 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + +N YGP+ FPEK+IP I + + L+GDG R +LY D V AL V K Sbjct: 232 ITVRANNVYGPHQFPEKIIPKFIMLLQRQRKLLLHGDGSPTRRYLYAGDIVDALDTVFHK 291 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT------ELIRFIEDRPGHDRR 293 G IG+ YNI +E NI + + LLD Y H+ E ++ E+RP +D+R Sbjct: 292 GDIGQIYNIASKDEISNIGLCHK---LLDIF---GYPHSREEDVEERVQRTENRPFNDQR 345 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 YA D SK+ + +GW P E GL TV WY WW + K L P Sbjct: 346 YATDGSKLAA-LGWQPTTTFEDGLRITVDWYRKFGEVWWGDISKVLTP 392 >gi|311266444|ref|XP_003131096.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Sus scrofa] Length = 390 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 123/328 (37%), Positives = 188/328 (57%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL---EETRLWWSC 117 D ++ + + D +++FAA++HVD S + A EF N+ GT +LL E R+ Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVE--- 135 Query: 118 LSQDKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y Sbjct: 136 ---------KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYK 185 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV+++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A V Sbjct: 186 FPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTV 245 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRR 293 LKKG+ GE YNIG N E V ++ L LI ++ S +E+ + ++ DRP +D R Sbjct: 246 LKKGKPGEIYNIGTNFEMS----VLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMR 301 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 Y + S KI +GW P+ + G+ KT Sbjct: 302 YPMKSEKIHG-LGWRPKVPWKEGIKKTT 328 >gi|149634948|ref|XP_001512139.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 406 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/344 (34%), Positives = 196/344 (56%), Gaps = 20/344 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV + +++ +DKL Y +L +L+ IS + F++ DIC Sbjct: 69 RVLVTGGAGFIASHVILSLVENYPNYIIINLDKLDYCASLKNLETISNKQNYKFIKGDIC 128 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ + + D +++FAA++HVD S + EF N+ GT +L+ S + Sbjct: 129 EAPFVKHLFETEKIDIVLHFAAQTHVDLSFVRTLEFTYVNVYGTHVLV-------SAAHE 181 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 182 ARVE--KFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 238 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLK Sbjct: 239 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQKRNFLYATDVVEAFLTVLKN 298 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ + +E + F+ DRP +D RY + Sbjct: 299 GKPGEIYNIGTNFEMSIMQLAKE----LIQLIKETSTESETENWVDFVNDRPSNDMRYPM 354 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ +GW P+ + G+ KT+ WY +N W+ K L P Sbjct: 355 KSEKMHG-LGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALDP 397 >gi|147900991|ref|NP_001088301.1| TDP-glucose 4,6-dehydratase [Xenopus laevis] gi|54038062|gb|AAH84333.1| LOC495137 protein [Xenopus laevis] Length = 351 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/343 (34%), Positives = 194/343 (56%), Gaps = 16/343 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV + +++ +DKL Y +L +L+ +S ++F+Q DIC Sbjct: 16 RILVTGGAGFIASHMIISLVENYPDYLIINLDKLDYCASLKNLESVSSHPNYTFIQGDIC 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ + + +++FAA++HVD S + +F N GT ILL + + Sbjct: 76 DSDFMKLIFQRENINIVLHFAAQTHVDLSFFQSFKFAYVNTYGTNILLNAAHGHGAGVE- 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +F+ ISTDEVYG F E P P++PY+++KA+++ VL++ + PV+ Sbjct: 135 ------KFVYISTDEVYGGSLNEEFDETSPKRPTNPYASSKAAAESFVLSFWERHKFPVV 188 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ +PEK+IP I+ + + ++G G+ R +LY D V AL +L +G Sbjct: 189 ITRSSNVYGPHQYPEKVIPKFISLLQQNQKCCIHGSGRQTRHFLYASDMVEALMTILTRG 248 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAID 297 + GE YNIG + E V E+ L I + S +EL + +++DRP +D RY + Sbjct: 249 KTGEVYNIGASFEIS----VSELARELIQTIKNTESESELNNWLVYVKDRPVNDLRYPMK 304 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ S +GW P+ + G+ +T+ WY DN W+ L+P Sbjct: 305 SEKMHS-LGWRPKVQWKEGIQRTIEWYKDNFHNWQNAEHALEP 346 >gi|297521284|ref|ZP_06939670.1| dTDP-glucose 4,6 dehydratase [Escherichia coli OP50] Length = 181 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/181 (55%), Positives = 125/181 (69%), Gaps = 10/181 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL EIS S +SF DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L Sbjct: 61 DAEAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD 120 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLA 170 +KK FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 121 EKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180 Query: 171 W 171 W Sbjct: 181 W 181 >gi|145356112|ref|XP_001422283.1| putative NAD-dependent epimerase/dehydratase [Ostreococcus lucimarinus CCE9901] gi|145356256|ref|XP_001422349.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582524|gb|ABP00600.1| putative NAD-dependent epimerase/dehydratase [Ostreococcus lucimarinus CCE9901] gi|144582590|gb|ABP00666.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 360 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 117/345 (33%), Positives = 193/345 (55%), Gaps = 19/345 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGFIGS + L + + ++++DKL Y +L +L+ + F++ D+ Sbjct: 1 MRILLTGGAGFIGSHVAERLASRHPEYTIVILDKLDYCSSLKNLERAKECANVRFVKGDV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L+ + D +++FAA+SHVD S + EF NI GT LLE +C+ Sbjct: 61 RSFDLLSYVLQSERIDTVMHFAAQSHVDNSFGNSYEFTKNNIEGTHALLE------ACVR 114 Query: 120 QDKKDQFRFLQISTDEVYGS--LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + RFL +STDEVYG +D + P++PY+ATKA ++ LV+A+G +YG+ Sbjct: 115 AQKTEIRRFLHVSTDEVYGENLMDSNTEHASL-LTPTNPYAATKAGAEMLVMAYGRSYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++ +N YGP +PEK IP G + ++GDG R +++V+D A ++L Sbjct: 174 PYIITRGNNVYGPNQYPEKAIPKFSILAKRGEKISIHGDGDATRSYMHVDDASSAFDVIL 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G + YNIG ER + + ++ LLD + H + DR +DRRY ID Sbjct: 234 HRGTTAQIYNIGSREERTILSVARDVCKLLDRDPETTIEH------VSDRAFNDRRYFID 287 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNW--WWRPLYKELKP 340 SK+ + +GW +++ + GL +TV WY +N+ +W L+P Sbjct: 288 CSKLLA-LGWRQEKSWDVGLAETVRWYSNNDLSAYWGEFSPALRP 331 >gi|330972804|gb|EGH72870.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 180 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 2/157 (1%) Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P L++NCSNNYGP HFPEKLIPL I +EG + +YG G VRDWLYVEDH RALY Sbjct: 1 GLPTLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPIYGKGDQVRDWLYVEDHARALYK 60 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHDRR 293 V+ +G IGE YNIGG+NE++N+++V + LLD L P S H LI +++DRPGHD R Sbjct: 61 VVTEGEIGETYNIGGHNEKQNLEVVNTVCALLDQLRPDSAHRPHASLITYVQDRPGHDLR 120 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 YAID+SKI+ E+GW P+E+ ESG+ KTV WYLDN W Sbjct: 121 YAIDASKIQRELGWVPEESFESGIRKTVQWYLDNPEW 157 >gi|322697172|gb|EFY88955.1| dtdp-glucose 4,6-dehydratase [Metarhizium acridum CQMa 102] Length = 368 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 120/345 (34%), Positives = 192/345 (55%), Gaps = 21/345 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++TGGAGFI S + R+L V+ DKL Y +LN+ + ++ F+F D+ + Sbjct: 1 MITGGAGFIASWVARHLTLTYPEAYNVVSFDKLDYCSSLNNTRVLNDKRNFTFYHGDLTN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ ++ D +++FAA+SHVD S + F N+ GT +LLE S Sbjct: 61 PSEVLDCMERYRIDTVLHFAAQSHVDLSFGNSYSFTHANVYGTHVLLE---------SAK 111 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + RF+ +STDEVYG + D E +P++PY+A+KA+++ LV ++ ++ +P Sbjct: 112 KAEIKRFIHVSTDEVYGEVREDDDDLVESSILSPTNPYAASKAAAEMLVQSYNKSFKLPT 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ +N YGP+ +PEK+I + G V L+GDG R +LY D A +L K Sbjct: 172 IIVRSNNVYGPHQYPEKIIAKFTCLLNRGRPVVLHGDGSPTRRYLYAGDAADAFDTILHK 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHT--ELIRFIEDRPGHDRRYAI 296 G IG YN+G ++E N+D+ + LLDA+ I +S S + I++ DRP +DRRYA+ Sbjct: 232 GHIGHIYNVGSSDEISNLDLCSK---LLDAMGIDRSTSEQFRKWIKYTHDRPFNDRRYAV 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 D +K++ +GW ++E GL TV WYL WW + L P Sbjct: 289 DGTKLRM-LGWTQNTSLERGLKTTVDWYLKYGESWWGDISHVLTP 332 >gi|307110009|gb|EFN58246.1| hypothetical protein CHLNCDRAFT_142172 [Chlorella variabilis] Length = 377 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 129/357 (36%), Positives = 191/357 (53%), Gaps = 33/357 (9%) Query: 3 LIVTGGAGFIGSALCRYLVN---DLKI----------QVLVIDKLTYAGNLNSLKEISQS 49 +++TGGAGFI S + LV + K+ V+V+DKL Y LN+L + Sbjct: 17 ILITGGAGFIASWVVIKLVKQRPECKVGSRVTLGVVGAVIVLDKLDYCATLNNLAAVRDL 76 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F F++ DI + + L++ Q D +++FAA++HVD S + F N GT +LLE Sbjct: 77 PNFKFIKGDIQSSDLVVHILEQEQIDTVMHFAAQTHVDNSFGNSMAFTMNNTYGTHVLLE 136 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDY 166 +RL+ RF+ +STDEVYG G E P P++PYSA KA ++ Sbjct: 137 CSRLYGKVQ--------RFINVSTDEVYGESSLGKTEGLKEHSPLEPTNPYSAAKAGAEM 188 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + A+ +Y +PV+++ +N YGP+ FPEK+IP R G + ++GDG VR +LYV Sbjct: 189 MARAYHTSYKLPVIVTRGNNVYGPHQFPEKMIPKFTLRANRGLDLPIHGDGLAVRSYLYV 248 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 ED A VL KG +GE YNIG ER +D+ +I + +L P ++ I+ ++D Sbjct: 249 EDVADAYITVLLKGVVGETYNIGTQKERSVVDVAADICKMF-SLDPATH-----IKHVKD 302 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD--NNWWWRPLYKELKPD 341 R +DRRY I K+ + +GW E GL KT+ WYL N +W EL D Sbjct: 303 RAFNDRRYFICDQKLLA-LGWQETTPWEEGLRKTIDWYLKHANREYWSHGDMELALD 358 >gi|301619909|ref|XP_002939327.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like isoform 1 [Xenopus (Silurana) tropicalis] Length = 349 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 194/343 (56%), Gaps = 18/343 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV + +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 16 RILVTGGAGFIASHMIISLVENYPDYLIINLDKLDYCASLKNLESISSHPNYKFIQGDIC 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I+ ++ + I++FAA++HVD S L + +F N GT ILL + Sbjct: 76 DPDFIKLVFEKENLNIILHFAAQTHVDLSFLQSFKFAYVNTYGTSILLN---------AA 126 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +F+ ISTDEVYG F E P P++PY+++KA+++ VL++ + PV+ Sbjct: 127 HGAGVEKFVYISTDEVYGGSLNEEFDESSPKRPTNPYASSKAAAESFVLSFWEQHKFPVV 186 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP+ +PEK+IP I+ + ++G G+ R +LY D V AL +L +G Sbjct: 187 ITRSSNVYGPHQYPEKVIPKFISLLQRNQKCCIHGSGRQTRHFLYASDVVDALITILTRG 246 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAID 297 IGE YNIG + E V ++ L + + S +E+ I ++ DRP +D RY++ Sbjct: 247 EIGEVYNIGASFEIS----VSQLARELIQTMKNTASESEIENWIVYVNDRPVNDLRYSMK 302 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S K+ S +GW P+ + + G+ +T+ WY DN W+ L+P Sbjct: 303 SEKMHS-LGWRPKVHWKEGIQRTIEWYKDNFHNWQNAELALEP 344 >gi|317157640|ref|XP_001826290.2| NAD dependent epimerase/dehydratase [Aspergillus oryzae RIB40] Length = 355 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 115/341 (33%), Positives = 191/341 (56%), Gaps = 35/341 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG R+L+ + V D L Y ++N K +SQ + F F++ ++C Sbjct: 29 VLVTGGAGFIGGWFVRHLLQTYGDRYAVTCFDNLDYCASVNKFKAVSQLSNFHFVRGNVC 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +AL+ + D+IV+FAA SHVD S+ + F TN+IGT +LLE +++ Sbjct: 89 TPKDVENALRNYHIDSIVHFAARSHVDTSLNDSLSFTQTNVIGTQVLLE--------VAR 140 Query: 121 DKKDQFRFLQISTDEVYGSLDK---GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ RF+ +STDEVYG D F+E+ +P++PYSA+KA+++ ++ A+ ++ I Sbjct: 141 EQGSIRRFIHVSTDEVYGENDAQNPTAFTEEQSLHPTNPYSASKAATEMIIQAYRKSFHI 200 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+++ C+N +GP +PEKLIP IT + + + ++GDG+ R +L+ D AL ++ Sbjct: 201 PLIIVRCNNVFGPRQYPEKLIPRFITLLNQRRRMPIHGDGRTSRAFLWAGDAAEALDVIF 260 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG GE YNI N+ ++ I F+ DRP +D Y D Sbjct: 261 HKGTDGETYNISSNDHLQS---------------------DNWIEFVADRPVNDDMYWTD 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 SK+++ +GW + N + L TV WY ++ + P Y+ L Sbjct: 300 DSKLRA-LGWTQRTNFDEALRATVDWYCRDSEGFWPNYEGL 339 >gi|123371463|ref|XP_001297395.1| NAD dependent epimerase/dehydratase family protein [Trichomonas vaginalis G3] gi|121877533|gb|EAX84465.1| NAD dependent epimerase/dehydratase family protein [Trichomonas vaginalis G3] Length = 348 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 116/334 (34%), Positives = 195/334 (58%), Gaps = 20/334 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIGS +C +LV LK ++++ +D + Y NL +L+EI F F++ I Sbjct: 10 ILLTGGAGFIGSHVCNHLV--LKYPDVKIICLDVMDYCANLRNLEEIMNKPNFLFIKGSI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E + +K D +++FAA+SHVDRS + EF TNI+GT +LLE C Sbjct: 68 NNVELVSYIMKTHAVDTVMHFAAQSHVDRSFGNSLEFTHTNILGTHVLLE-------CAK 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q+ RF+ +STDEVYG + G E+ P++PY+ +KA ++++ A+ ++ +P Sbjct: 121 QNNIK--RFIHVSTDEVYGEVLSGCAEEEKSILCPTNPYACSKAGAEFMCQAYIRSFNMP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++++ +N +GP FPEK+IP + G ++GDG +R++L+ D V+A +L Sbjct: 179 IIITRGNNVFGPKQFPEKVIPKFTLLLKAGHKCCIHGDGSALRNFLHTSDVVQAFDTILH 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG++ + YNIG + E V E+ L ++ + I F+ DR +D RY I+S Sbjct: 239 KGKLHQIYNIGTDFEIS----VLEMTKKLIKVLNMPGKPEDWIEFVPDRAFNDSRYMINS 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 SK+ + +GW + ++ L +TV WYLD+ +W+ Sbjct: 295 SKLIA-LGWHANTDFDTLLKETVQWYLDHMDYWK 327 >gi|213613377|ref|ZP_03371203.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 216 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 98/183 (53%), Positives = 130/183 (71%), Gaps = 10/183 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++++TGGAGFIGSA+ R+++ + + V+ IDKLTYAGNL SL +IS+SN ++F DIC Sbjct: 23 VKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 82 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +++QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L + Sbjct: 83 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE 142 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------GLFSEDMPYNPSSPYSATKASSDYLVLA 170 DKK+ FRF ISTDEVYG L LF+E Y PSSPYSA+KASSD+LV A Sbjct: 143 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 202 Query: 171 WGH 173 W + Sbjct: 203 WAY 205 >gi|310789479|gb|EFQ25012.1| dTDP-glucose 4,6-dehydratase [Glomerella graminicola M1.001] Length = 436 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 121/345 (35%), Positives = 193/345 (55%), Gaps = 19/345 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + +++ + F+F+ DI Sbjct: 49 IMITGGAGFIACWLVRHLTLTYPNNYNIISFDKLDYCSSLNNTRVLNEKSNFTFVHGDIT 108 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE S S Sbjct: 109 NPTEVVNCLRRYNIDTIFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE------SAKSV 162 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K RF+ ISTDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 163 DIK---RFIHISTDEVYGEVNDDDDDLLETSILAPTNPYAASKAAAEMLVQSYQKSFKLP 219 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ FPEK+IP + G V L+GDG R +L+ D A +L Sbjct: 220 VIIVRSNNVYGPHQFPEKIIPKFTCLLNRGQPVVLHGDGSPTRRYLFAGDAADAFDTILH 279 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH--TELIRFIEDRPGHDRRYAI 296 KG++G+ YN+G +E NID+ + L + IP S + + +++ DRP +D RYA+ Sbjct: 280 KGQMGQIYNVGSYDEISNIDLCSHL--LKEMNIPYSTTDEFKKWVKYTHDRPFNDHRYAV 337 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 D +K++ ++GW + + GL TV WY WW + L P Sbjct: 338 DGTKLR-QLGWDQKTSFADGLRMTVNWYRQFGEEWWGDISSVLTP 381 >gi|145356123|ref|XP_001422288.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582529|gb|ABP00605.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 360 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/347 (34%), Positives = 193/347 (55%), Gaps = 23/347 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGFIGS + L + + ++V+DKL Y +L +L+ + F++ D+ Sbjct: 1 MRILLTGGAGFIGSHVAERLASRHPEYTIVVLDKLDYCSSLKNLERAKECANVRFVKGDV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L+ + D +V+FAA+SHVD S + EF NI GT LLE +C+ Sbjct: 61 RSFDLLSYVLQSERIDTVVHFAAQSHVDNSFGNSYEFTKNNIEGTHALLE------ACVR 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSPYSATKASSDYLVLAWGHTY 175 + RFL +STDEVYG + L + + P++PY+ATKA ++ LV+A+G +Y Sbjct: 115 AQTTEIRRFLHVSTDEVYG---ENLMDSNTEHAALLTPTNPYAATKAGAEMLVMAYGRSY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P +++ +N YGP +PEK IP G + ++GDG R +++V+D A + Sbjct: 172 GLPYIITRGNNVYGPNQYPEKAIPKFSILAKRGEKISIHGDGDVTRSYMHVDDAGSAFDV 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L +G + YNIG ER + + ++ LLD + H + DR +DRRY Sbjct: 232 ILHRGTPAQIYNIGSREERTILSVARDVCKLLDRDPETTIEH------VSDRAFNDRRYF 285 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW--WWRPLYKELKP 340 ID SK+ + +GW +++ + GL +TV WY +N+ +W L+P Sbjct: 286 IDCSKLLA-LGWRQEKSWDVGLAETVRWYSNNDLSAYWGEFSPALRP 331 >gi|317036418|ref|XP_001397332.2| NAD dependent epimerase/dehydratase [Aspergillus niger CBS 513.88] Length = 346 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 112/338 (33%), Positives = 188/338 (55%), Gaps = 34/338 (10%) Query: 3 LIVTGGAGFIGSALCRYL--VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG R+L V K VL D L Y + + + + F F D+C Sbjct: 25 ILVTGGAGFIGGWFVRHLLQVYGTKYTVLCFDILDYCASKRNFQPVEHLPNFHFFPGDLC 84 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + + ++F+ DA+V+FAA SHVD+S++ F +N+ GT +LLE R + + Sbjct: 85 DRDRVTALFQQFKVDAVVHFAANSHVDQSLVNPLSFTRSNVTGTHVLLEAARQAGTVI-- 142 Query: 121 DKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ ISTDEVYG G F+E+ NP++PYSA+KA+++ + ++ +++ + Sbjct: 143 ------RFIHISTDEVYGGNMPGQDYAFTEEDQLNPTNPYSASKAAAEMIANSYRYSFHM 196 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P++++ C+N +GP +PEKLIP +M+ + L+G G+ VR ++YV D + A ++L Sbjct: 197 PIIITRCNNVFGPCQYPEKLIPKFAMQMLRSQRMTLHGQGEAVRGFVYVSDAMSAFDIIL 256 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G + E YNI + KS + + + + DRP +DR Y + Sbjct: 257 HRGLVSETYNISSKEQ------------------IKSDTCEQYLETVADRPFNDRMYWTN 298 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN--NWWWRP 333 SK++ ++GW + + + GL T+ WY D+ +W P Sbjct: 299 DSKLR-QLGWTEKVSFDEGLIMTLEWYRDHGETFWSGP 335 >gi|322709376|gb|EFZ00952.1| dTDP-D-glucose 4,6-dehydratase [Metarhizium anisopliae ARSEF 23] Length = 459 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 191/346 (55%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFI S + R+L V+ DKL Y +LN+ + ++ F+F D+ Sbjct: 91 IMVTGGAGFIASWVVRHLTLTYPKAYNVVSFDKLDYCSSLNNTRVLNDKRNFTFYHGDLT 150 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + ++ ++ D +++FAA+SHVD S + F N+ GT +LLE S Sbjct: 151 NPSEVLDCMERYRIDTVLHFAAQSHVDLSFGNSYSFTHANVYGTHVLLE---------SA 201 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + RF+ +STDEVYG + D E +P++PY+A+KA+++ LV ++ ++ +P Sbjct: 202 KKAEIKRFIHVSTDEVYGEVKEDDDDLVESSILSPTNPYAASKAAAEMLVQSYNKSFKLP 261 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ +N YGP+ +PEK+I + G V L+GDG R +LY D A +L Sbjct: 262 TIIVRSNNVYGPHQYPEKIIAKFTCLLNRGRPVVLHGDGSPTRRYLYAGDAADAFDTILH 321 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHT--ELIRFIEDRPGHDRRYA 295 KG IG YN+G ++E N+D+ + LLD + I S S + I++ DRP +DRRYA Sbjct: 322 KGHIGHIYNVGSSDEISNLDLCSQ---LLDTMGIDHSTSEQFRKWIKYTHDRPFNDRRYA 378 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K++ +GW ++E GL TV WYL WW + L P Sbjct: 379 VDGTKLRM-LGWSQNTSLEIGLKTTVDWYLKYGESWWGDISHVLTP 423 >gi|66815085|ref|XP_641641.1| hypothetical protein DDB_G0279465 [Dictyostelium discoideum AX4] gi|74856242|sp|Q54WS6|TGDS_DICDI RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|60469683|gb|EAL67671.1| hypothetical protein DDB_G0279465 [Dictyostelium discoideum AX4] Length = 434 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 126/389 (32%), Positives = 208/389 (53%), Gaps = 59/389 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS L YL K +++V+DKL Y N+N+L + + F F + +I Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + ++ + D +++ AA +HVD S + +F NI+GT LLE +C + Sbjct: 71 DSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLE------TCKNY 124 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS--------------EDMPYNPSSPYSATKASSDY 166 K +F+ +STDEVYGS GL E NP++PYSA+KA +++ Sbjct: 125 KLK---KFIYVSTDEVYGS---GLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEH 178 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV ++ ++ +PV+++ +N YGP +PEK+IP I ++ ++G G+N R++LY+ Sbjct: 179 LVQSYYKSFKLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYI 238 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS------------ 274 +D V A ++L+KG IG YNIG + E N+D+ +I + L + Sbjct: 239 DDIVSAFDIILRKGEIGNVYNIGTDFEISNLDVAKKIINISINLNNNNNNNNNNNNNNNN 298 Query: 275 ---------------YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + + I +I+DRP +D RY I+ SK+ S +GW + E G+ K Sbjct: 299 NNNNNNNNNNNDFNIMDYKKFINYIDDRPFNDHRYNINYSKL-SNLGWKKSISWEEGIEK 357 Query: 320 TVCWYLDNNWWWRPL----YKELKPDNDY 344 T WY +N +W L Y+ + DN++ Sbjct: 358 TFIWYKNNRNYWLNLNVDSYENINNDNNF 386 >gi|302891277|ref|XP_003044521.1| hypothetical protein NECHADRAFT_45636 [Nectria haematococca mpVI 77-13-4] gi|256725444|gb|EEU38808.1| hypothetical protein NECHADRAFT_45636 [Nectria haematococca mpVI 77-13-4] Length = 395 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 122/357 (34%), Positives = 193/357 (54%), Gaps = 26/357 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI S L R+L ++ DKL Y +LN+ + +++ FSF Q DI Sbjct: 43 IMITGGAGFIASWLVRHLTLTYPHAYNIVSFDKLDYCASLNNTRALNEKRNFSFYQGDIT 102 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE + Sbjct: 103 NPVEVVDCLERYNIDTIFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLESAK-------- 154 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R + ISTDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 155 -KVGIKRLIHISTDEVYGEVKDDDDDLLEASILAPTNPYAASKAAAEMLVNSYMRSFKLP 213 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ FPEK+IP + + G V L+GDG R +LY D A +L Sbjct: 214 VIIVRSNNVYGPHQFPEKIIPKFSSLLHRGQPVVLHGDGSPTRRYLYAGDAADAFDTILH 273 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G+ YN+G +E NI + ++ + + + +++ DRP +D RYA+D+ Sbjct: 274 KGEMGQIYNVGSYDEISNITLCHKLLAEMGIDDQNTTEFKKWVKYTHDRPFNDHRYAVDA 333 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY--LDNNWWWR--------PLY--KELKPDND 343 +K+K ++GW + E GL T+ WY + WW PL K +KPDN+ Sbjct: 334 TKLK-QLGWTQKTPFEQGLKITMDWYQRYGDRWWGDISAVLSPFPLVVNKNVKPDNE 389 >gi|317472318|ref|ZP_07931646.1| dTDP-glucose 4,6-dehydratase [Anaerostipes sp. 3_2_56FAA] gi|316900275|gb|EFV22261.1| dTDP-glucose 4,6-dehydratase [Anaerostipes sp. 3_2_56FAA] Length = 216 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 102/189 (53%), Positives = 138/189 (73%), Gaps = 7/189 (3%) Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT 203 F+ED P + SSPYS++KAS+D VLA+ TYG+PV +S CSNNYGPYHFPEKLIPL I+ Sbjct: 13 FFTEDTPLHTSSPYSSSKASADLFVLAYYRTYGLPVTISRCSNNYGPYHFPEKLIPLIIS 72 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 R + + +YG G+NVRDWL+V DH A+ L+L KG+ GE YN+GG+NER N+++V I Sbjct: 73 RALADEELPVYGKGENVRDWLHVSDHCEAIDLILHKGKPGEVYNVGGHNERTNLEVVQTI 132 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 LD P+S LI+F+ DRPGHD RYAID +KI+ E+GW P+ ++G+ +T+ W Sbjct: 133 LKALDK--PES-----LIKFVTDRPGHDMRYAIDPAKIEKELGWKPKYTFDTGIRQTIEW 185 Query: 324 YLDNNWWWR 332 YL+N WW+ Sbjct: 186 YLNNKEWWQ 194 >gi|406099|gb|AAA65538.1| UDP-N-acetyl-D-glucosamine-2-epimerase [Neisseria meningitidis] Length = 176 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 94/172 (54%), Positives = 126/172 (73%), Gaps = 2/172 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + + FRF ISTDEVYG L LF+E PY PSSPYSA+KASSD+LV AW Sbjct: 123 QHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAW 174 >gi|270652394|ref|ZP_06222271.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270317097|gb|EFA28734.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 173 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 95/160 (59%), Positives = 120/160 (75%), Gaps = 2/160 (1%) Query: 115 WSCLSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 W L + KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW Sbjct: 1 WHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWH 60 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+PV+++N SNNYG Y PEKLIPL I+ + G + +YGDGQ +RDWL+VE+HV+A Sbjct: 61 RTYGLPVIITNSSNNYGAYQHPEKLIPLVISNALMGKPLPIYGDGQQIRDWLFVEEHVQA 120 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 LYLVL KGR+GE YNIGGN E+ N+++V I LL+ L P Sbjct: 121 LYLVLTKGRVGENYNIGGNCEKTNLEVVKTICQLLEELAP 160 >gi|145608848|ref|XP_369809.2| hypothetical protein MGG_06324 [Magnaporthe oryzae 70-15] gi|145016278|gb|EDK00768.1| hypothetical protein MGG_06324 [Magnaporthe oryzae 70-15] Length = 424 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 117/346 (33%), Positives = 192/346 (55%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFI L R+L ++ DKL Y +LN+ + +++ FSF Q D+ Sbjct: 47 IMVTGGAGFIACWLVRHLALTYPHAYNIVSFDKLDYCSSLNNTRALNEKRNFSFYQGDVT 106 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L+ + D I +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 107 SPTEVMDCLERYNIDTIFHFAAQSHVDLSFGNSYSFTHTNVYGTHVLLE---------SA 157 Query: 121 DKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF+ ISTDEVYG + D+ L + P++PY+A+KA+++ LV ++ ++ + Sbjct: 158 KKVGIRRFIHISTDEVYGEVKDDDEDLLESSI-LAPTNPYAASKAAAEMLVHSYQKSFKL 216 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV++ +N YGP+ +PEK+IP + G V L+GDG R +L+ D A +L Sbjct: 217 PVIIVRSNNVYGPHQYPEKIIPKFSCLLHRGQPVVLHGDGSPTRRYLFAGDAADAFDTIL 276 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--ELIRFIEDRPGHDRRYA 295 +G +G+ YN+G +E N+D+ ++ L + IP + + +++ ++RP +D RYA Sbjct: 277 HRGELGQVYNVGSYDEISNLDLCDKL--LTELKIPHDTTEEFRKWVKYTQERPFNDHRYA 334 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K++ ++GW + + GL+ TV WY WW + K L P Sbjct: 335 VDGTKLR-QLGWDQKTSFAEGLSITVEWYRKFGEKWWGDISKVLSP 379 >gi|12847753|dbj|BAB27693.1| unnamed protein product [Mus musculus] gi|148668236|gb|EDL00566.1| TDP-glucose 4,6-dehydratase, isoform CRA_c [Mus musculus] Length = 343 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/324 (36%), Positives = 184/324 (56%), Gaps = 20/324 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAY-------- 130 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 131 -EAGVEKFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VL K Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G GE YNIG N E + + E L LI ++ S +E + ++ DRP +D RY + Sbjct: 249 GEPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESETESWVDYVSDRPHNDMRYPM 304 Query: 297 DSSKIKSEIGWFPQENMESGLNKT 320 S KI S +GW P+ E G+ KT Sbjct: 305 KSEKIHS-LGWKPKVPWEEGIKKT 327 >gi|154311283|ref|XP_001554971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] gi|150850891|gb|EDN26084.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10] Length = 431 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 190/346 (54%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + ++ FSF DI Sbjct: 46 IMITGGAGFIACWLVRHLTLTYPDAYNIVSFDKLDYCASLNNTRALNDKRNFSFYHGDIT 105 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE + Sbjct: 106 NPSEVVDCLERYNIDTIFHFAAQSHVDLSFGNSYAFTHTNVYGTHVLLESAK-------- 157 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ ISTDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 158 -KVGIKKFIHISTDEVYGEVKDDDDDLLETSILAPTNPYAASKAAAEMLVHSYQKSFKLP 216 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ +PEK+IP + G V L+GDG R +L+ D A +L Sbjct: 217 VMIVRSNNVYGPHQYPEKIIPKFSCLLQRGQPVVLHGDGTPTRRYLFAGDAADAFDTILH 276 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYA 295 KG IG+ YN+G +E N+ + ++ LD IP S + EL ++ +DRP +D RYA Sbjct: 277 KGTIGQIYNVGSYDEISNLTLCSKLLTYLD--IPHS-TQEELHKWVKHTQDRPFNDHRYA 333 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K++ ++GW + + E+G+ TV WY WW + K L P Sbjct: 334 VDGTKLR-QLGWDQKTSFENGMAVTVDWYKRFGERWWGDITKVLTP 378 >gi|320590160|gb|EFX02603.1| dtdp-glucose -dehydratase [Grosmannia clavigera kw1407] Length = 409 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 186/346 (53%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + ++ F+F Q DI Sbjct: 45 IMITGGAGFIACWLVRHLTLTYPDAYNIVSFDKLDYCASLNNTRALNDKRNFTFYQGDIT 104 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 105 NPSEVVDCLERYNIDTIFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE---------SA 155 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ ISTDEVYG + E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 156 KKVGIKRFIHISTDEVYGEVKDDDDDLLESSILAPTNPYAASKAAAEMLVHSYQKSFKLP 215 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ +PEK+IP + G V L+GDG R +L+ D A +L Sbjct: 216 VIIVRSNNVYGPHQYPEKVIPKFSCLLNRGEPVVLHGDGSPTRRYLFAGDAADAFDTILH 275 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYA 295 KG IG+ YN+G +E N+D+ G LL L K + E +++ DRP +D RYA Sbjct: 276 KGVIGQIYNVGSYDEISNLDLC---GHLLTELGIKHDTPEEFKKWVKYTHDRPFNDHRYA 332 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K++ ++GW + + GL TV WY WW + K L P Sbjct: 333 VDGTKLR-QLGWEQKTSFADGLKITVDWYRKYGEQWWGNISKVLSP 377 >gi|302410781|ref|XP_003003224.1| dTDP-D-glucose 4,6-dehydratase [Verticillium albo-atrum VaMs.102] gi|261358248|gb|EEY20676.1| dTDP-D-glucose 4,6-dehydratase [Verticillium albo-atrum VaMs.102] Length = 414 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 111/343 (32%), Positives = 187/343 (54%), Gaps = 15/343 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI R+L ++ DKL Y +LN+ + +++ + F+F+Q D+ Sbjct: 47 IMITGGAGFIACWFVRHLTLTYPDAYNIISFDKLDYCSSLNNTRALNERSNFTFVQGDVT 106 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + LK + D + +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 107 NPNEVLNCLKRYNIDTVFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE---------SA 157 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +F+ +STDEVYG + E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 158 KSVGIHKFIHVSTDEVYGEVKDDDDDLLESSILAPTNPYAASKAAAEMLVQSYQKSFKLP 217 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ FPEK+IP + G V L+GDG R +L+ D A +L Sbjct: 218 VIIVRSNNVYGPHQFPEKIIPKFTCLLNRGQPVVLHGDGTPTRRYLFAGDAADAFDTILH 277 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG +G+ YN+G +E N+D+ ++ +D + +++ DRP +D RYA+D Sbjct: 278 KGHMGQIYNVGSYDEISNLDLCSKLLREMDISQGGPEDFKKWVKYTHDRPFNDHRYAVDG 337 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +K++ ++GW + + E GL TV WY WW + + L P Sbjct: 338 TKLR-QLGWEQKTSFEEGLKITVDWYRRFGEEWWGDISQILTP 379 >gi|148544281|ref|YP_001271651.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri DSM 20016] gi|184153658|ref|YP_001841999.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri JCM 1112] gi|227365000|ref|ZP_03849040.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri MM2-3] gi|325681688|ref|ZP_08161208.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri MM4-1A] gi|148531315|gb|ABQ83314.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri DSM 20016] gi|183225002|dbj|BAG25519.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri JCM 1112] gi|227069970|gb|EEI08353.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri MM2-3] gi|324979000|gb|EGC15947.1| dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri MM4-1A] Length = 295 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 166/291 (57%), Gaps = 38/291 (13%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD++ + + Q DA+V++AAESH D S++ FI TNI+GT +L+ R Sbjct: 12 DICDKDLVDKLVS--QADAVVHYAAESHNDNSLIDPTPFIQTNIVGTSVLINACR----- 64 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP---------YNPSSPYSATKASS---- 164 K R+ ISTDEVYG L ED+P + P SPY + S Sbjct: 65 -----KYDVRYHHISTDEVYGDLP---LREDLPGHGEGKGEKFTPESPYRPSSPYSSSKA 116 Query: 165 --DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 D LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G LYG G+NVRD Sbjct: 117 SSDLLVRAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGSGKNVRD 176 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 W++ DH RA++ +L KG+IGE Y IG + E+ N + V E+ L +Y Sbjct: 177 WIHTNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPKDAYDQ----- 230 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 ++DRP HD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW+ Sbjct: 231 -VKDRPRHDLRYAIDATKLRTELGWEPEFTDFKTGLQHTIDWYTEHQDWWK 280 >gi|299469656|emb|CBN76510.1| conserved unknown protein [Ectocarpus siliculosus] Length = 381 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 117/338 (34%), Positives = 189/338 (55%), Gaps = 19/338 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S L LV + ++V D+L Y L +L I+Q + F++ +IC Sbjct: 26 ILITGGAGFIASHLVILLVEKYPQYNIVVFDRLDYCACLENLDCIAQKPNYKFVKGNICS 85 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+E + D I++FAA++HVD S + +F NI GT +LLE S Sbjct: 86 SDMVTYVLREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLE---------SAK 136 Query: 122 KKDQFRFLQISTDEVYGS--LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K RF+ +STDEVYG D+ ED P++PY+ATKA ++++ A+ ++ +PV Sbjct: 137 KVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPV 196 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +N YGP+ +PEKLIP I +++ G + ++G G N R++L+V D A +L Sbjct: 197 IITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHA 256 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G YNIGG NE + + ++ + + TE F +DR +D RY I+S Sbjct: 257 GVEGSIYNIGGTNEHSVLKVARDLMRIFELPSEDGDKATE---FGDDRVFNDLRYTINSD 313 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K+ + +GW ++ E GL +TV W D +PL ++ Sbjct: 314 KLAA-LGWKEEKTWEQGLKETVEWVPDQQ---QPLRRQ 347 >gi|307104751|gb|EFN53003.1| hypothetical protein CHLNCDRAFT_7301 [Chlorella variabilis] Length = 327 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/338 (35%), Positives = 183/338 (54%), Gaps = 32/338 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR-E 63 VTGGAGFIGS + L+ +V+V+DKL Y ++++L+E F F++ DI + Sbjct: 1 VTGGAGFIGSHVAIRLLKRYSYKVVVLDKLDYCASMHNLREAQDHPRFKFVRGDITGGLD 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 ++ L+E D +++FAA++HVD S + F N GT +LLE R++ Sbjct: 61 LVQYVLREEGVDTVLHFAAQTHVDNSFGNSLAFTANNTYGTHVLLEACRVYGRVR----- 115 Query: 124 DQFRFLQISTDEVYGSLDKGLFS---EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ +STDEVYG L + E P++PYSA KA ++ + LA+ +Y +PV+ Sbjct: 116 ---RFINVSTDEVYGDTSHSLLAGLPESSSLAPTNPYSAAKAGAELMSLAYLTSYNLPVI 172 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK- 239 ++ +N +GP+ FPEKLIP + G + ++GDG R +LYV D A ++L K Sbjct: 173 VTRSNNVFGPHQFPEKLIPKFVLLASRGERLPVHGDGLATRSYLYVADVAEAFDIILHKA 232 Query: 240 ------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 G++G+ YNIG ER +D+ +I + +P S E +R DR Sbjct: 233 SGGGSGLFGTATGQVGQVYNIGSQQERTVLDVAADICAVFR--LPAG-SQVEHVR---DR 286 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +DRRY I +K+ S +GW E+GL KTV WYL Sbjct: 287 AFNDRRYFICDAKL-SALGWRESTPWEAGLQKTVDWYL 323 >gi|159487407|ref|XP_001701714.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] gi|158280933|gb|EDP06689.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] Length = 328 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 181/325 (55%), Gaps = 20/325 (6%) Query: 3 LIVTGGAGFIGS-ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + R N + +V+V+DKL Y +L +L ++ F F++ DI Sbjct: 20 ILITGGAGFIASHVVIRITKNYPQYKVVVLDKLDYCASLKNLGSVANLPNFRFIKGDIQS 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I LK + D +++FAA++HVD S + F N GT +LLE R+ Sbjct: 80 MDLISYILKTEEIDTVMHFAAQTHVDNSFGNSLAFTLNNTYGTHVLLEAARMHGRIR--- 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS---EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG G + E +P++PYSA KA ++ + A+ +Y +P Sbjct: 137 -----RFINVSTDEVYGETSLGKTTGLVESSHLDPTNPYSAAKAGAELIARAYITSYKLP 191 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+++ +N YGP+ FPEKLIP G+ + ++GDG +VR +LYVED A VL Sbjct: 192 VIITRGNNVYGPHQFPEKLIPKFTLLANRGADLPIHGDGTSVRSYLYVEDVAEAFDCVLH 251 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 KG GE YNIG ER ++ +I + +P+S + + DR +DRRY I S Sbjct: 252 KGVTGETYNIGTERERSVKEVAKDIAKFFN--LPESK-----VVNVRDRAFNDRRYYIGS 304 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 +K+ + +GW + + E GL KT+ W Sbjct: 305 NKLGA-LGWTERTSWEDGLKKTIDW 328 >gi|301101235|ref|XP_002899706.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans T30-4] gi|262102708|gb|EEY60760.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans T30-4] Length = 421 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 167/279 (59%), Gaps = 17/279 (6%) Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 N + F+ +I + + LK + D I++FAA+SHVD S + +F TNI+GT +LLE Sbjct: 126 NNYKFIHGNITGADLVGYILKTERIDTIMHFAAQSHVDNSFGNSIDFSKTNILGTHVLLE 185 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGS--LDKGLFSEDMPYNPSSPYSATKASSDYL 167 RL+ RF+ +STDEVYG D +ED P++PY+ATKA +++L Sbjct: 186 AARLYGIK---------RFIHVSTDEVYGEGRPDSARMTEDHVLEPTNPYAATKAGAEFL 236 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 V ++ ++G+P +++ +N YGP+ +PEKL+P I +++ V ++GDG + R++LY+ Sbjct: 237 VKSFHRSFGLPTIITRSNNVYGPHQYPEKLVPKIINQILRDRPVTIHGDGMHTRNYLYIS 296 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--LIRFIE 285 D V A L+L +G++GE YNIGG NE N + + LL + P+ + LI ++ Sbjct: 297 DVVAAFDLILHEGKVGEVYNIGGENELSNRLVAMD---LLAMMKPQLVGADKAILITHVQ 353 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 DRP +D RY IDS+KI+ +GW + GL KTV W+ Sbjct: 354 DRPFNDHRYVIDSAKIR-RLGWNEKVTWREGLRKTVKWF 391 >gi|324510967|gb|ADY44577.1| Rhamnose biosynthetic enzyme 2 [Ascaris suum] Length = 344 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 119/328 (36%), Positives = 182/328 (55%), Gaps = 12/328 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTY-AGNLNSLKEISQSNLFSFLQVDIC 60 +++TGG GFIGS Y+ + V IDKL + A N ++++S + F+ ++ Sbjct: 8 VLITGGCGFIGSNFINYVFDRWPSTSFVNIDKLEFGASEENVESKVTKSERYKFICGNVQ 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + L+E++ D +++FAA +HVD S I N++ T LLE + L Sbjct: 68 NLELLLRTLREYKIDTVIHFAAITHVDESYNDRVGTIVENVLSTTTLLEAVTFHYQNLR- 126 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ISTDEVYG D +E NP++PY+A+K + + ++ A+ H+Y +P Sbjct: 127 ------RFVHISTDEVYGDSKNDIAPKNEKSLLNPTNPYAASKGACELILNAYWHSYKVP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ +N YGP KLIP T IEG L GDGQ+ R W+YV+D A+ V + Sbjct: 181 YVMVRMNNVYGPRQARSKLIPKFTTLAIEGKPYPLMGDGQHTRSWMYVDDCAEAILKVTE 240 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GR+GE YNIG + E++N D+ +I + L+ + S + R I DRP HDRRY ID Sbjct: 241 NGRLGETYNIGTDFEKRNYDLTLQIHDTVAKLLDREKSSPQF-RHIPDRPYHDRRYYIDF 299 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 SKI SE+ W + GL KT+ +Y++ Sbjct: 300 SKINSEMNWRCTTDFNVGLAKTIEYYVN 327 >gi|38532148|gb|AAR23325.1| NDP-glucose dehydratase [Streptomyces sp. 275] Length = 241 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 148/235 (62%), Gaps = 17/235 (7%) Query: 100 NIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSA 159 N++GT LL+ SCL R + +STDEVYGS+ +G + ED P P+SPYSA Sbjct: 16 NVVGTQNLLD------SCLHTGVP---RVVHVSTDEVYGSITEGSWDEDCPLLPNSPYSA 66 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 +KA SD + A+ HT+G+ V ++ C+NNYGPY PEK+IP +TR++ G + LYGDG + Sbjct: 67 SKAGSDLMARAYWHTHGLNVSVTRCANNYGPYQHPEKMIPRFVTRLLAGGSLPLYGDGHH 126 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 R+W++V+DH RA+ LVL+KG G YN+GG E N ++ + L A + Sbjct: 127 RREWIHVDDHCRAVQLVLEKGEPGTVYNVGG-TELSNRELTGRLLHLCGAGWDR------ 179 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + + DR GHDRRY++D ++I+ +G+ P +++GL + V WY D+ WW+PL Sbjct: 180 -VSPVVDRKGHDRRYSVDDTRIRDHLGFEPAIPLDAGLAEVVHWYRDHRSWWQPL 233 >gi|46122179|ref|XP_385643.1| hypothetical protein FG05467.1 [Gibberella zeae PH-1] Length = 449 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 115/346 (33%), Positives = 190/346 (54%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI + R+L ++ DKL Y +LN+ +S+S F+F DI Sbjct: 51 IMITGGAGFIACWVVRHLTLTYPHAYNIVSFDKLDYCASLNNTGILSESRNFTFYHGDIT 110 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + ++ + D +++FAA+SHVD S + F TN+ GT +LLE + Sbjct: 111 NPAEVVDCMERYNIDTVLHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLESAK-------- 162 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 163 -KVGIGRFIHVSTDEVYGEVKEDDDDLLETSILAPTNPYAASKAAAEMLVQSYQKSFKLP 221 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ +N YGP+ +PEK+IP I + + L+GDG R +LY D A +L Sbjct: 222 AIIVRSNNVYGPHQYPEKIIPKFICLLNRQRPLVLHGDGLPTRRYLYAGDAADAFDTILH 281 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYA 295 KG+ G+ YN+G ++E N+++ LLD + + +L I++ DRP +DRRYA Sbjct: 282 KGQTGQIYNVGSHDEVSNLELC---SMLLDRMEISHDTPEQLRKWIKYTRDRPFNDRRYA 338 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K+K +GW + +++ GLN TV W+ WW + L P Sbjct: 339 VDGTKLK-RLGWEQKVSIDEGLNITVDWFTRFGESWWGDISHVLTP 383 >gi|156065271|ref|XP_001598557.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154691505|gb|EDN91243.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 435 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 189/346 (54%), Gaps = 21/346 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + ++ FSF DI Sbjct: 51 IMITGGAGFIACWLVRHLTLTYPDAYNIVSFDKLDYCSSLNNTRALNDKRNFSFYHGDIT 110 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ D I +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 111 NPSEVVDCLERHNIDTIFHFAAQSHVDLSFGNSYAFTHTNVYGTHVLLE---------SA 161 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ ISTDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 162 KKFGIKKFIHISTDEVYGEVKDDDDDLLETSILAPTNPYAASKAAAEMLVHSYQKSFKLP 221 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V++ +N YGP+ +PEK+IP + G V L+GDG R +L+ D A +L Sbjct: 222 VIIVRSNNVYGPHQYPEKIIPKFSCLLQRGQPVVLHGDGTPTRRYLFAGDAADAFDTILH 281 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYA 295 KG +G+ YN+G +E N+ + ++ L+ IP S + EL ++ +DRP +D RYA Sbjct: 282 KGTMGQIYNVGSYDEISNLTLCSKLLTYLN--IPHS-TQAELHKWVKHTQDRPFNDHRYA 338 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 +D +K++ ++GW + + E+G+ TV WY WW + K L P Sbjct: 339 VDGTKLR-QLGWDQKTSFENGMAITVDWYKRFGERWWGDITKVLTP 383 >gi|308813917|ref|XP_003084264.1| UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase (ISS) [Ostreococcus tauri] gi|116056148|emb|CAL58329.1| UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase (ISS) [Ostreococcus tauri] Length = 689 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 118/345 (34%), Positives = 183/345 (53%), Gaps = 22/345 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGFI S + R L K +++V+DKL Y ++ +L+ F++ DI Sbjct: 5 ILLTGGAGFIASHVVRLLAEKYPKYKIVVLDKLDYCASMKNLESTRHLLNVEFIKGDIRS 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + ++ D +++FAA+SHVD S + EF N+ GT LLE T+ + Sbjct: 65 VDLLNFIFQKNTIDVVLHFAAQSHVDNSFGNSFEFTKNNVEGTHALLEATKRAGTVT--- 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYN----PSSPYSATKASSDYLVLAWGHTYGI 177 RF+ +STDEVYG S + + P++PYSATKA ++ LV+A+G +YG+ Sbjct: 122 -----RFVHVSTDEVYGESSFEHDSSNTEHASLLAPTNPYSATKAGAEMLVMAYGRSYGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P +++ +N YGP +PEK IP G + L+GDG R +++V+D A +L Sbjct: 177 PFIITRGNNVYGPNQYPEKAIPKFSILAATGQKISLHGDGLATRSYMHVDDAAAAFDCIL 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G + YNIG + ER + + +I +L TE I + DR +DRRY ID Sbjct: 237 HRGTVSHVYNIGAHEERTVLSVARDICEIL------RRDPTETITHVRDRAFNDRRYFID 290 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYL--DNNWWWRPLYKELKP 340 SK+ + +GW + + E GL KTV WY D +W L P Sbjct: 291 CSKLLA-LGWTQRVSWEEGLRKTVEWYSTEDLRSFWGDFAPALTP 334 >gi|259415004|ref|ZP_05738927.1| dTDP-glucose 4,6-dehydratase [Silicibacter sp. TrichCH4B] gi|259349455|gb|EEW61202.1| dTDP-glucose 4,6-dehydratase [Silicibacter sp. TrichCH4B] Length = 172 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 89/158 (56%), Positives = 112/158 (70%), Gaps = 2/158 (1%) Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++L+NCSNNYGP+HFPEKLIP+ I + G + +YGDG N+RDWLYVEDH AL LVL+ Sbjct: 1 MVLTNCSNNYGPFHFPEKLIPVVILNALAGKALPIYGDGSNIRDWLYVEDHADALLLVLQ 60 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHDRRYAI 296 KG G YN+GG NER N+++V + +LD P+ S+ E I F+ DRPGHD RYAI Sbjct: 61 KGENGRSYNVGGENERTNLELVETLCAILDDKRPRGNGASYKEQITFVTDRPGHDARYAI 120 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D S+I+ E+GW P +E GL KTV WYLDN WWR L Sbjct: 121 DPSRIREELGWRPSVTVEEGLAKTVQWYLDNEDWWRAL 158 >gi|227824677|ref|ZP_03989509.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905176|gb|EEH91094.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 222 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 11/199 (5%) Query: 130 QISTDEVYGSLDKGL----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 Q+STD+VYG L F E PSSPYS++KA++D VL++ TYGIPV + S Sbjct: 22 QVSTDKVYGDLPLSAAAPGFKETDQLRPSSPYSSSKAAADLAVLSYHRTYGIPVTIGRSS 81 Query: 186 NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER 245 NNYG + PEKLIP I ++ + LYGDG NVRDWLYV DH RA+ ++L+ GR+GE Sbjct: 82 NNYGRFQHPEKLIPKMIQLALKNKPLPLYGDGSNVRDWLYVHDHCRAIDMILQHGRVGEI 141 Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEI 305 YN+G ER N++IV I +L+ P+S LI+F+EDR GHD RY++D SKI++E+ Sbjct: 142 YNVGAGEERSNLEIVHLICRILNK--PES-----LIQFVEDRKGHDVRYSLDISKIRNEL 194 Query: 306 GWFPQENMESGLNKTVCWY 324 GW P+ + G+ KT+ WY Sbjct: 195 GWSPETAFDVGMAKTIQWY 213 >gi|74139194|dbj|BAE38483.1| unnamed protein product [Mus musculus] Length = 311 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/317 (35%), Positives = 177/317 (55%), Gaps = 19/317 (5%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +DKL Y +L +L+ +S + F+Q DICD ++ + + D +++FAA++HVD Sbjct: 2 IVNLDKLDYCASLKNLEPVSNKQNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVD 61 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVY-GSLDKGLFS 146 S + A EF N+ GT +L+ + +F+ +STDEVY GSLD+ F Sbjct: 62 LSFVRAFEFTYVNVYGTHVLVNAAY---------EAGVEKFIYVSTDEVYGGSLDQE-FD 111 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI 206 E P P++PY+++KA+++ V ++ Y PV+++ SN YGP+ +PEK+IP I+ + Sbjct: 112 ESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQ 171 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 ++G G R++LY D V A VL KG GE YNIG N E + + E Sbjct: 172 HNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKE---- 227 Query: 267 LDALIPKSYSHTEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L LI ++ S +E + ++ DRP +D RY + S KI S +GW P+ E G+ KTV W Sbjct: 228 LIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHS-LGWKPKVPWEEGIKKTVEW 286 Query: 324 YLDNNWWWRPLYKELKP 340 Y N W+ K L+P Sbjct: 287 YRKNFHNWKNAEKALEP 303 >gi|116283261|gb|AAH05284.1| TGDS protein [Homo sapiens] Length = 316 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 111/300 (37%), Positives = 176/300 (58%), Gaps = 19/300 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ IS + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ S + Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLV-------SAAHE 131 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y PV Sbjct: 132 ARVE--KFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A VLKK Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK 248 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAI 296 G+ GE YNIG N E + + E L LI ++ S +E+ + ++ DRP +D RY + Sbjct: 249 GKPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESEMENWVDYVNDRPTNDMRYPM 304 >gi|50418499|ref|XP_457784.1| DEHA2C02398p [Debaryomyces hansenii CBS767] gi|49653450|emb|CAG85822.1| DEHA2C02398p [Debaryomyces hansenii] Length = 362 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 127/352 (36%), Positives = 192/352 (54%), Gaps = 42/352 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVDI 59 +VTGGAGFIGS Y V IDKL YA N NSL ++ +S F+F+++D+ Sbjct: 8 FLVTGGAGFIGSHFLDYFVVRYPNYHFTCIDKLNYATNENTNSLSKVMESPNFNFIKMDL 67 Query: 60 CDRECI--RSALKEFQPDAIVN---FAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + + E++ + I N FAAES VDRS F T NI+GT LLE +RL Sbjct: 68 SAEYTVLYNFLVTEYKKNKITNIIHFAAESCVDRSFSNPLYFTTNNILGTQNLLECSRLL 127 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D KD FRF+ ISTDEVYG +G E NP++PY+ATKA+ D ++ ++ + Sbjct: 128 ILNFP-DVKDHFRFIHISTDEVYGEQHEGETVDETSKLNPTNPYAATKAACDLILKSYYY 186 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-----------GSHVFLYGDGQNVRD 222 +Y IPV +N YGP +PEK+IP+ + ++ E + ++G+G N R Sbjct: 187 SYKIPVTSIRSNNVYGPRQYPEKIIPMTLNKLKEYVRQYPNSETMAHKIKIHGNGSNKRA 246 Query: 223 WLYVEDHVRALYLVLKKGR------------IGERYNIGGNNERKNIDIVFEIGFLLDAL 270 +L+++D ++ + L+ KK + I + +NIG +E N+ +V F+ D Sbjct: 247 YLHIQDFIQGIALIWKKFKEEQATAYAKEQVINQTFNIGSEDEIDNLSLV---KFICDNY 303 Query: 271 IPKSYSHTEL-----IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 + K S + L I FI+DR +D RY+ID +KIK + GW P +++SG+ Sbjct: 304 LSKKLSFSNLNYSNYIEFIKDRNYNDSRYSIDYNKIK-QFGWKPTIDLKSGI 354 >gi|322492767|emb|CBZ28045.1| putative GDP-mannose 4,6 dehydratase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 444 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 121/386 (31%), Positives = 190/386 (49%), Gaps = 68/386 (17%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSL---------------- 43 R++VTGG GFIGSA RYL+ + V +D L Y ++++ Sbjct: 59 RILVTGGCGFIGSAFIRYLLMYAPASVHVFNLDTLEYCAGVDAVLGPLAATRDDDRAASD 118 Query: 44 -------------------KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 ++S + + F+ I D + AL+ D IV+ AA++ Sbjct: 119 SCASASEGAIGTVASCSLPCDVSPVSRYHFIAGSILDATLVLDALRTHHIDVIVHMAAQT 178 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 HVDRS + F N++GT LLE R + RFL +STDEVYG Sbjct: 179 HVDRSFSRSVLFTQVNVVGTHTLLECAREYGQLT--------RFLHVSTDEVYGETP--- 227 Query: 145 FSEDMPYN-------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL 197 + P N P++PY+ATKA++++LV A+ H++ +PVL+S +N +GP +PEK+ Sbjct: 228 -ATAQPANEASRVLCPTNPYAATKAAAEHLVSAYYHSFKVPVLISRGNNAFGPGQYPEKV 286 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNI 257 IP I + + ++GDG + R +LYV+D AL +L +G +GE YNI E Sbjct: 287 IPSFIVHALRQERLPIHGDGHHQRSFLYVDDVASALCTILVRGGVGEVYNITSKRELSVH 346 Query: 258 DIVFEI-----GFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ + G D +I S + +R++ DR +D RY +S K+ ++ GW P+ Sbjct: 347 EVAQRVVACVAGDDHDKVIAASRADFDASYVRYVADRAYNDARYCTESEKLAAQ-GWAPE 405 Query: 311 ENMESGLNKTVCWY----LDNNWWWR 332 + E GL +TV WY L+ +WR Sbjct: 406 VSFEEGLRRTVAWYRKHPLETGGYWR 431 >gi|270698313|ref|ZP_06222995.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270315944|gb|EFA28010.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 158 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 89/154 (57%), Positives = 115/154 (74%), Gaps = 2/154 (1%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DICD + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE + +W Sbjct: 1 IDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEVAKNYWH 60 Query: 117 CLSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L + KK FRF ISTDEVYG SL + F+E PY+PSSPYSA+KA+SD+LV AW T Sbjct: 61 TLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLVYAWHRT 120 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 YG+PV+++N SNNYG Y PEKLIPL I+ + G Sbjct: 121 YGLPVIITNSSNNYGAYQHPEKLIPLVISNALMG 154 >gi|71655917|ref|XP_816514.1| GDP-mannose 4,6 dehydratase [Trypanosoma cruzi strain CL Brener] gi|70881647|gb|EAN94663.1| GDP-mannose 4,6 dehydratase, putative [Trypanosoma cruzi] Length = 378 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/333 (33%), Positives = 180/333 (54%), Gaps = 21/333 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGG GFIGS +L+ + V +DK+ Y + S++ S + + F++ +I + Sbjct: 24 LLVTGGLGFIGSNFINHLMRTHSGVHVYNLDKVDYCSSFRSIENPSDPH-YHFVKGNITN 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+ D I+NFAA+SHVD S + F N++GT +LLE R + Sbjct: 83 ADLVMYVLRHHDIDTIINFAAQSHVDNSFGNSLSFTYNNVLGTHVLLECARTYGRIE--- 139 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +F+ +STDEVYG + E+ NP++PY+ATKA+ +Y+V ++ ++G+P ++ Sbjct: 140 -----KFIHVSTDEVYGQVTDSK-KEEGTLNPTNPYAATKAAVEYIVKSYHISFGLPCII 193 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N YGPY +PEKLIP I M G + + G+G N R +++ D RA ++ G Sbjct: 194 TRGNNVYGPYQYPEKLIPRFIMLMNAGKKLTIQGNGSNKRTFIHASDVARAFVAIINHGF 253 Query: 242 IGERYNIGGNNERKNIDI---------VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 IG+ YNIG +E+ +DI + G P + + F++DR +D Sbjct: 254 IGDVYNIGSCDEKSVLDIARMTVKYVRAHKCGERQPLADPSEEEVSRHLVFVKDREFNDE 313 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RY I K++ E+GW + E G +TV WYL Sbjct: 314 RYDISVEKLQ-ELGWRQEVRFEEGYEETVAWYL 345 >gi|268680838|ref|YP_003305269.1| NAD-dependent epimerase/dehydratase [Sulfurospirillum deleyianum DSM 6946] gi|268618869|gb|ACZ13234.1| NAD-dependent epimerase/dehydratase [Sulfurospirillum deleyianum DSM 6946] Length = 345 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 115/336 (34%), Positives = 177/336 (52%), Gaps = 23/336 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNS--LKEISQSNLFSFLQVDI 59 ++TGGAGFIGS Y+ +++V+D LTYAGN+++ ++ + S F F + Sbjct: 5 FLITGGAGFIGSNFLHYIFTTYPHSKIIVLDLLTYAGNVDNFPVRPNNNSGRFEFWYGSV 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + ++ + D +V+FAAE+HV RSI F T+++GT + + + Sbjct: 65 TNSALVEELVE--RADIVVHFAAETHVTRSIYDNRNFFETDVLGTQTIA-------NAVL 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++KK RF+ IST EVYG+ + F E P NP+SPY+A K +D LV ++ +TY IP Sbjct: 116 KNKKSVERFIHISTSEVYGTAENCAFMDEKHPLNPASPYAAAKVGADRLVYSYVNTYDIP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + NNYGP EK IP IT ++ G + ++G G+ RDW+YVED R + +L Sbjct: 176 ATIIRPFNNYGPRQHLEKAIPRFITSLLLGEKLTVHGKGEASRDWIYVEDTCRGIDAILS 235 Query: 239 K---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 GE +N+G + D+ + L E I + EDRPG + Sbjct: 236 APIDKVKGEVFNLGTSKTISIRDVALRVAGLFGF-------REEKIIYNEDRPGQVDCHL 288 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D SKI+ +GW P+ E GL +T+ WY +N W Sbjct: 289 ADISKIERMLGWTPKVTFEEGLQETIAWYKNNKHMW 324 >gi|169602927|ref|XP_001794885.1| hypothetical protein SNOG_04468 [Phaeosphaeria nodorum SN15] gi|160706291|gb|EAT88228.2| hypothetical protein SNOG_04468 [Phaeosphaeria nodorum SN15] Length = 365 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 173/319 (54%), Gaps = 19/319 (5%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 V+ DKL Y LN+ + + FSF DI ++ L++ + D I +FAA+SHVD Sbjct: 11 VVSFDKLDYCATLNNTRILDDKANFSFENGDITSPADVKRVLRKHKIDTIFHFAAQSHVD 70 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL--F 145 S + EF TN+ GT +LLE R + RF+ ISTDEVYG + G Sbjct: 71 LSFGNSYEFTNTNVYGTHVLLERAR---------EHGVNRFIHISTDEVYGDVPVGAADL 121 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 E P++PYSA+KA+++ +V A+ ++ +P++ +N YGP+ FPEK+IP I + Sbjct: 122 GETSILAPTNPYSASKAAAEMMVSAYRSSFKLPLITIRANNVYGPHQFPEKIIPKFIMLL 181 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 + L+GDG R +LY D V AL + KG IG+ YNI +E N +I + Sbjct: 182 QRQQKLLLHGDGSPTRRYLYAGDIVDALDTIFHKGVIGQIYNIASKDEISNTEICHQ--- 238 Query: 266 LLDALIPKSYSHTEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 LLD + + EL ++ EDRP +D+RYA D SK+ + +GW P+ + + GL KTV Sbjct: 239 LLDIFGLEHDTPAELKEWVQHTEDRPFNDQRYATDGSKLAA-LGWEPKTSFDEGLKKTVD 297 Query: 323 WYLD-NNWWWRPLYKELKP 340 WY WW + + L P Sbjct: 298 WYRRFGEVWWGDISRVLTP 316 >gi|71409563|ref|XP_807120.1| GDP-mannose 4,6 dehydratase [Trypanosoma cruzi strain CL Brener] gi|70871050|gb|EAN85269.1| GDP-mannose 4,6 dehydratase, putative [Trypanosoma cruzi] Length = 378 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/333 (33%), Positives = 179/333 (53%), Gaps = 21/333 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 L+VTGG GFIGS +L+ + V +DK+ Y + S++ S + F++ +I + Sbjct: 24 LLVTGGLGFIGSNFINHLLRTHSGVHVYNLDKVDYCSSFRSIENPSDP-YYHFVRGNITN 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L+ D I+NFAA+SHVD S + F N++GT +LLE R + Sbjct: 83 ADLVMYVLRHHDIDTIINFAAQSHVDNSFGNSLSFTYNNVLGTHVLLECARTYGRIE--- 139 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +F+ +STDEVYG + E+ NP++PY+ATKA+ +Y+V ++ ++G+P ++ Sbjct: 140 -----KFIHVSTDEVYGQVTDSK-KEEGTLNPTNPYAATKAAVEYIVKSYHISFGLPCII 193 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + +N YGPY +PEKLIP I M G + + G+G N R +++ D RA ++ G Sbjct: 194 TRGNNVYGPYQYPEKLIPRFIMLMNAGKKLTIQGNGSNKRTFIHASDVARAFVAIINHGF 253 Query: 242 IGERYNIGGNNERKNIDI---------VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 IG+ YNIG +E+ +DI + G P + + F++DR +D Sbjct: 254 IGDVYNIGSCDEKSVLDIARMTVKYVRAHKCGEREPLADPSEEEVSRHLVFVKDREFNDE 313 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RY I K++ E+GW + E G +TV WYL Sbjct: 314 RYDISVEKLQ-ELGWRQEVRFEEGYKETVAWYL 345 >gi|125973601|ref|YP_001037511.1| dTDP-glucose 4,6-dehydratase [Clostridium thermocellum ATCC 27405] gi|256003420|ref|ZP_05428411.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|125713826|gb|ABN52318.1| dTDP-glucose 4,6-dehydratase [Clostridium thermocellum ATCC 27405] gi|255992710|gb|EEU02801.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|316940157|gb|ADU74191.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 328 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 27/339 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGF+GS R+ + K +++ +D L+ NL ++K++ +S + F++ I + Sbjct: 4 MLVTGGAGFVGSNFIRFFLRRNKNFIIINMDNLSSTSNLENVKDLEKSPRYHFVKGSITN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +K +PD I+NFA+ES +D F TN++GT LLE R +W Sbjct: 64 HELVNYVIKRHRPDCIINFASESSLDNCANNPLNFTQTNVLGTQTLLESARYFWG----- 118 Query: 122 KKDQFR---FLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K++F+ F+Q+ST EVYGS FSE+ P +P+SA+KA +D LV ++ TYG Sbjct: 119 -KNKFQGNLFIQVSTGEVYGSTPANDVFFSEEAPLLSDNPFSASKAGADMLVKSYTITYG 177 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P +++ C YGP IP I + + + + VR+W+YV DH AL + Sbjct: 178 FPAIITRCCPTYGPCQHIGNFIPKCIINALSDKPITVCEN--KVREWIYVLDHCIALTKI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLL---DALIPKSYSHTELIRFIEDRPGHDRR 293 L GR GE YNI NE + D+ +I L+ D+ I K+ +D +R Sbjct: 236 LFYGRTGEIYNISSGNEISDFDVAKKILGLVGKPDSAIEKA----------DDSSLPTKR 285 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++S K+KS + W + +E GL +T+ WY N W+ Sbjct: 286 CILNSYKLKSNLNWSIKFKLEEGLRETILWYKQNPDRWK 324 >gi|15898538|ref|NP_343143.1| dTDP-glucose 4,6-dehydratase (rfbB-2) [Sulfolobus solfataricus P2] gi|13814979|gb|AAK41933.1| dTDP-Glucose 4,6-dehydratase (rfbB-2) [Sulfolobus solfataricus P2] Length = 350 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 27/254 (10%) Query: 82 AESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD 141 + + VDRSI +F++TN+ GT +LE R + F+++ ISTDEVYG Sbjct: 103 SHTDVDRSIYKPQDFVSTNVFGTVNVLEAARRY----------NFKYVHISTDEVYG--- 149 Query: 142 KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLA 201 + E+ NPSSPYSA+KAS+D V ++ TY + ++ SNNYGP FPEK IP A Sbjct: 150 EECSDENSSVNPSSPYSASKASADLFVKSYIKTYNVEAIIVRPSNNYGPRQFPEKFIPKA 209 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGGNNERKNIDIV 260 I R I G +V +YG+G+ RDW+YVED R ++ +++ GE YNI G KNI ++ Sbjct: 210 IIRTILGIYVPIYGNGEQERDWIYVEDTARVIFDLIRSAEWRGEVYNIPGGYRVKNIQLI 269 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 LL+ +I K ++++ DRPGHDRRY + ++K+ + +E GL KT Sbjct: 270 ----RLLERVIKKEIK----VKYVSDRPGHDRRYCMINTKLN-----YTTTPLEEGLRKT 316 Query: 321 VCWYLDNNWWWRPL 334 WY +NNWWW L Sbjct: 317 YDWYANNNWWWSSL 330 >gi|68643117|emb|CAI33422.1| dTDP-D-glucose 4,6-dehydratase RmlB [Streptococcus pneumoniae] Length = 212 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 124/193 (64%), Gaps = 16/193 (8%) Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR 204 F+ + YNPSSPYS+TKA+SD +V AW ++G+ +SNCSNNYGPY EK IP IT Sbjct: 12 FTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITN 71 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNID----IV 260 ++ G LYG+G+NVRDW++ DH ++ +L KG+IGE Y IG + E+ N + I+ Sbjct: 72 ILSGIKPKLYGEGKNVRDWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELIL 131 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNK 319 E+G DA Y H + DR GHD RYAID+SK++ E+GW P+ N E+GL Sbjct: 132 KEMGQATDA-----YDH------VTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKA 180 Query: 320 TVCWYLDNNWWWR 332 T+ WY DN WW+ Sbjct: 181 TIKWYTDNQEWWK 193 >gi|281417806|ref|ZP_06248826.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|281409208|gb|EFB39466.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] Length = 328 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 112/339 (33%), Positives = 180/339 (53%), Gaps = 27/339 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGF+GS R+ + K +++ +D L+ NL ++ ++ +S + F++ I + Sbjct: 4 MLITGGAGFVGSNFIRFFLRRNKNFIIINMDNLSSTSNLENVNDLEKSPRYHFVKGSITN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +K +PD I+NFA+ES +D F TN++GT LLE R +W Sbjct: 64 HELVNYVIKRHRPDCIINFASESSLDNCANNPLNFTQTNVLGTQTLLESARYFWG----- 118 Query: 122 KKDQFR---FLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K++F+ F+Q+ST EVYGS FSE+ P +P+SA+KA +D LV ++ TYG Sbjct: 119 -KNKFQGNLFIQVSTGEVYGSTPANDVFFSEEAPLLSDNPFSASKAGADMLVKSYTITYG 177 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P +++ C YGP IP I + + + + VR+W+YV DH AL + Sbjct: 178 FPAIITRCCPTYGPCQHIGNFIPKCIINALSDKPITVCEN--KVREWIYVLDHCIALTKI 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLL---DALIPKSYSHTELIRFIEDRPGHDRR 293 L GR GE YNI NE + D+ +I L+ D+ I K+ +D +R Sbjct: 236 LFYGRTGEIYNISSGNEISDFDVAKKILGLVGKPDSAIEKA----------DDSSLPTKR 285 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++S K+KS + W + +E GL +T+ WY N W+ Sbjct: 286 CILNSYKLKSNLNWSIKFKLEEGLRETILWYKQNPDRWK 324 >gi|190349164|gb|EDK41767.2| hypothetical protein PGUG_05865 [Meyerozyma guilliermondii ATCC 6260] Length = 369 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 121/353 (34%), Positives = 200/353 (56%), Gaps = 32/353 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL--NSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS YLV + +DKL+YA N N+L+++S + F+F+++D+ Sbjct: 19 VLVTGGAGFIGSHTLDYLVQKYPDCKFTCVDKLSYATNYSENNLRKVSGCDNFTFIKLDL 78 Query: 60 CDR-----ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + E I + F I+NFAAES VD+S F N++ T LLE R Sbjct: 79 AEEHQRLDELINHSANNFT--TIINFAAESCVDKSFNDPLYFTKNNVLATQNLLECCRTL 136 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + +++ F+F+ ISTDEVYG +G + ED P +P++PY+A+KA+ D ++ A+ H Sbjct: 137 LNSKPNLRRN-FKFIHISTDEVYGEQKEGEIIDEDGPLHPTNPYAASKAACDLIIEAYKH 195 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAI--------TRMIEGSHVFLYGDGQNVRDWLY 225 +Y IP+ L +N YGP FPEK+IP+ + T + E + ++G+G++ R +L+ Sbjct: 196 SYKIPITLIRSNNVYGPRQFPEKIIPVCLKALQKASPTGIAEKERIPIHGNGRHTRRYLH 255 Query: 226 VEDHVRALYLV---LKKGR------IGERYNIGGNNERKNIDIVFEIG--FLLDALIPKS 274 V D +A+ + LK +GE +N+G ++E N+ +V I F+ +S Sbjct: 256 VLDFAKAVDHIWNWLKNTSESSSDFLGETFNVGTDDEVDNLSMVKLICTIFMRKKFGVES 315 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + IR +DR +D RY+ID +KIK ++GW + ++E G+ + V ++N Sbjct: 316 LDASSFIRHTKDRNYNDFRYSIDFTKIK-KVGWKQEISLEQGIEELVKAEIEN 367 >gi|146412261|ref|XP_001482102.1| hypothetical protein PGUG_05865 [Meyerozyma guilliermondii ATCC 6260] Length = 369 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 121/353 (34%), Positives = 200/353 (56%), Gaps = 32/353 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL--NSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS YLV + +DKL+YA N N+L+++S + F+F+++D+ Sbjct: 19 VLVTGGAGFIGSHTLDYLVQKYPDCKFTCVDKLSYATNYLENNLRKVSGCDNFTFIKLDL 78 Query: 60 CDR-----ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + E I + F I+NFAAES VD+S F N++ T LLE R Sbjct: 79 AEEHQRLDELINHSANNFT--TIINFAAESCVDKSFNDPLYFTKNNVLATQNLLECCRTL 136 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + +++ F+F+ ISTDEVYG +G + ED P +P++PY+A+KA+ D ++ A+ H Sbjct: 137 LNSKPNLRRN-FKFIHISTDEVYGEQKEGEIIDEDGPLHPTNPYAASKAACDLIIEAYKH 195 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAI--------TRMIEGSHVFLYGDGQNVRDWLY 225 +Y IP+ L +N YGP FPEK+IP+ + T + E + ++G+G++ R +L+ Sbjct: 196 SYKIPITLIRSNNVYGPRQFPEKIIPVCLKALQKASPTGIAEKERIPIHGNGRHTRRYLH 255 Query: 226 VEDHVRALYLV---LKKGR------IGERYNIGGNNERKNIDIVFEIG--FLLDALIPKS 274 V D +A+ + LK +GE +N+G ++E N+ +V I F+ +S Sbjct: 256 VLDFAKAVDHIWNWLKNTSESSSDFLGETFNVGTDDEVDNLSMVKLICTIFMRKKFGVES 315 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + IR +DR +D RY+ID +KIK ++GW + ++E G+ + V ++N Sbjct: 316 LDASSFIRHTKDRNYNDFRYSIDFTKIK-KVGWKQEISLEQGIEELVKAEIEN 367 >gi|50551569|ref|XP_503259.1| YALI0D25080p [Yarrowia lipolytica] gi|15028595|gb|AAK77226.1| putative dTDP-glucose 4,6-dehydratase [Yarrowia lipolytica] gi|49649127|emb|CAG81463.1| YALI0D25080p [Yarrowia lipolytica] Length = 327 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 27/341 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + R+ L +V+ +D L Y+G +L++ + L +F+ VDIC Sbjct: 1 MSILVTGGAGFIGSWISRHFA--LTEKVVCLDALRYSGRKKNLED---AELQAFVHVDIC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE-TRLWWSCLS 119 D + +R + +++ AAESHV+ S + T N++GT LLEE TR + Sbjct: 56 DAQELRRVFDTYDIATVIHAAAESHVECSYSDPIQVTTANVLGTQTLLEEMTRNARETDT 115 Query: 120 QDKKDQF-RFLQISTDEVYGSLDKGLFSEDM---PYNPSSPYSATKASSDYLVLAWGHTY 175 + ++ + + ISTDE+YG +ED+ P PS+PY+A+KA+++ + A+ +Y Sbjct: 116 EIREQNLPKLIYISTDEIYGDQADLTGTEDLETSPLCPSNPYAASKAAAEMFISAYTKSY 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + +N YG Y +PEK+IP M++G L G G++ R ++Y +D V A+ L Sbjct: 176 GLECVTLRFNNVYGEYQYPEKIIPAFCLAMLKGDKCMLQGSGEHRRRYIYADDCVNAVQL 235 Query: 236 VLK-----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 KG++ +N+G E+ N + +G +L + + +F+ DRP + Sbjct: 236 TYNHFDELKGQV---FNVGSKEEKSNRCVFETLGGML--------GYDQGPQFVSDRPYN 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D Y + KI+ E+GW + + E GL +TV WY N WW Sbjct: 285 DSAYRTNDDKIR-ELGWEQKVSFEDGLTRTVDWYRRNVSWW 324 >gi|148668234|gb|EDL00564.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Mus musculus] Length = 356 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 186/337 (55%), Gaps = 33/337 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D ++V +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAY-------- 130 Query: 121 DKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV Sbjct: 131 -EAGVEKFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188 Query: 180 LLSNCSNNYGPYHFPEKL------IPLAITRMIEGSHVFL-------YGDGQNVRDWLYV 226 +++ SN YGP+ +PEK+ + + I G+ +F+ +G G R++LY Sbjct: 189 VITRSSNVYGPHQYPEKVKVISKFVVVFTGCNIIGNTLFMVISLSCIHGSGLQRRNFLYA 248 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRF 283 D V A VL KG GE YNIG N E + + E L LI ++ S +E + + Sbjct: 249 ADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKE----LIQLIKETNSESETESWVDY 304 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 + DRP +D RY + S KI S +GW P+ E G+ KT Sbjct: 305 VSDRPHNDMRYPMKSEKIHS-LGWKPKVPWEEGIKKT 340 >gi|308804527|ref|XP_003079576.1| GDP-mannose 4,6 dehydratase (ISS) [Ostreococcus tauri] gi|116058031|emb|CAL54234.1| GDP-mannose 4,6 dehydratase (ISS) [Ostreococcus tauri] Length = 432 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 113/334 (33%), Positives = 182/334 (54%), Gaps = 23/334 (6%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + R L +V ++D + + ++ S + D+ Sbjct: 74 RVLVTGGAGFIASHVVDRLLERRETREVTILDAFERSA---CARNVTDDARCSVVAGDVR 130 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L+ D +++FAAE+HVD S + F TN+IGT + LE R C + Sbjct: 131 DGALVREILRVKAIDTVLHFAAETHVDASFGNSLAFTETNVIGTHVALEAAR---RCGTI 187 Query: 121 DKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D RF+ +STDEVYG +L G P++PYSA+K + LV+A+G +Y +P Sbjct: 188 D-----RFVHVSTDEVYGETLFDGGSEGTSVLAPTNPYSASKPPPEMLVVAYGTSYNLPY 242 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ +N YGP +PEK+IP I + G+ V ++GDG +R +++V D A +VL+ Sbjct: 243 VITRGNNVYGPRQYPEKVIPKFIHLLRRGARVPIHGDGLALRGYMHVRDAAAAFDVVLRA 302 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G YNIG ER + + ++ + + + E + ++EDR +DRRY +DSS Sbjct: 303 GENKSIYNIGAREERTVVSVARDLCAIFN------RNPEEFLEYVEDRAFNDRRYFVDSS 356 Query: 300 KIKSEIGWFPQENMESGLNKTVCWY---LDNNWW 330 K++ E+GW + + GL +TV WY +D +W Sbjct: 357 KLE-ELGWRQEIEWDVGLRETVDWYHRAIDERYW 389 >gi|154339507|ref|XP_001562445.1| GDP-mannose 4,6 dehydratase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063028|emb|CAM39477.1| putative GDP-mannose 4,6 dehydratase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 450 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/386 (31%), Positives = 191/386 (49%), Gaps = 68/386 (17%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYA-------GNLNSLKEISQSNL- 51 R++VTGG GFIGSA R+L+ + + +D L Y G L++ + ++ L Sbjct: 61 RILVTGGCGFIGSAFIRHLLVYAPATVHIFNLDTLEYCAGVDAVLGALSATGDADRATLG 120 Query: 52 ---------------------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 + F+ I D + AL+ + D IV+ AA++ Sbjct: 121 GDTSASEDQSTTAASCPSSNAGSPVSRYHFIPGSILDATLVLDALRTHRIDVIVHMAAQT 180 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 HV+ S + F N++GT LLE R + RFL ISTDEVYG + Sbjct: 181 HVENSFSKSLLFTKVNVVGTHTLLECAREYGQLT--------RFLHISTDEVYGETPATV 232 Query: 145 FSEDMPYN---PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLA 201 D P++PY+ATKA++++LV ++ H++ +PVL+S +N +GP +PEK+IP Sbjct: 233 RPADETSTVLRPTNPYAATKAAAEHLVSSYHHSFRLPVLISRSNNVFGPGQYPEKVIPRF 292 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF 261 IT + + + GDG + R +LY+ED VRAL +L +G +GE YNI G E V Sbjct: 293 ITCALRQERLPIQGDGHHQRSFLYIEDVVRALSTILVRGTVGEVYNIAGEEELS----VH 348 Query: 262 EIGFLLDALIP-------KSYSHTEL----IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 E+ + A I ++ S E +R++ DR +D RY D K+ + +GW Q Sbjct: 349 EVAQRVVACIAGADHDKVRAASRAEFDASYVRYVADRAYNDARYCSDKEKLAA-LGWTQQ 407 Query: 311 ENMESGLNKTVCWY----LDNNWWWR 332 + GL++TV WY L+ +W+ Sbjct: 408 VSFGEGLHRTVSWYRGHPLEAGGYWK 433 >gi|284175731|ref|ZP_06389700.1| dTDP-glucose 4,6-dehydratase (rfbB-2) [Sulfolobus solfataricus 98/2] gi|261603064|gb|ACX92667.1| NAD-dependent epimerase/dehydratase [Sulfolobus solfataricus 98/2] Length = 244 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/250 (40%), Positives = 146/250 (58%), Gaps = 27/250 (10%) Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF 145 +DRSI +F++TN+ GT +LE R + F+++ ISTDEVYG + Sbjct: 1 MDRSIYKPQDFVSTNVFGTVNVLEAARRY----------NFKYVHISTDEVYG---EECS 47 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 E+ NPSSPYSA+KAS+D V ++ TY + ++ SNNYGP FPEK IP AI R Sbjct: 48 DENSSVNPSSPYSASKASADLFVKSYIKTYNVEAIIVRPSNNYGPRQFPEKFIPKAIIRT 107 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIG 264 I G +V +YG+G+ RDW+YVED R ++ +++ GE YNI G KNI ++ Sbjct: 108 ILGIYVPIYGNGEQERDWIYVEDTARVIFDLIRSAEWRGEVYNIPGGYRVKNIQLI---- 163 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 LL+ +I K ++++ DRPGHDRRY + ++K+ + +E GL KT WY Sbjct: 164 RLLERVIKKEIK----VKYVSDRPGHDRRYCMINTKLN-----YTTTPLEEGLRKTYDWY 214 Query: 325 LDNNWWWRPL 334 +NNWWW L Sbjct: 215 ANNNWWWSSL 224 >gi|241948305|ref|XP_002416875.1| dTDP-glucose 4,6-dehydratase, putative [Candida dubliniensis CD36] gi|223640213|emb|CAX44462.1| dTDP-glucose 4,6-dehydratase, putative [Candida dubliniensis CD36] Length = 319 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 181/319 (56%), Gaps = 22/319 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFIG Y+V I IDKL YA N++ ++++ + + F F+ +D+ Sbjct: 8 RIVVTGGAGFIGIHFLYYMVKKYPNIHFTCIDKLNYASNVSEIEKLKEYSNFEFIHLDLS 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D I+NFAAES VDRS F NI+ T LLE RL Sbjct: 68 DNLDNLLKITKNTTD-IINFAAESSVDRSFEDPVYFTKNNILATQNLLECHRL------- 119 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL ISTDEVYG + +G E+ NP++PYSA+KA+ D ++ ++ ++Y +P+ Sbjct: 120 -NPGIGYFLHISTDEVYGDVYEGTNKENAAMNPTNPYSASKAAIDLIIKSYQYSYKLPIT 178 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +PEK+IPL I + E + + ++G G N R +LYV D V+A+ V K Sbjct: 179 VLRPNNVYGPLQYPEKIIPLTIQCINEKTPIPVHGKGTNKRKYLYVLDLVQAIETVWIKT 238 Query: 241 --RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + + YNIGG +E NI + I +++ P I+FI+DR +D Y+ID+ Sbjct: 239 PLTVNQIYNIGGTDELDNISL---IKLIMEIFGPGE------IQFIKDRNYNDTNYSIDT 289 Query: 299 SKIKSEIGWFPQENMESGL 317 +KI + +GW P+ ++ GL Sbjct: 290 TKIYN-LGWSPKISIVQGL 307 >gi|549563|sp|P35675|YGAE_ERWAM RecName: Full=Uncharacterized protein in galE 3'region gi|429079|emb|CAA53768.1| unnamed protein product [Erwinia amylovora] Length = 164 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/164 (54%), Positives = 119/164 (72%), Gaps = 2/164 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ VL IDKLTYAGNL SL+EIS + F + DIC Sbjct: 1 MKILVTGGAGFIGSAVIRHIINNTDDTVLNIDKLTYAGNLESLQEISDNPRDHFSKTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A +F+PD +++ AAESHVDRSI G FI TN+IGT++LLE R++W L Sbjct: 61 DSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNMIGTYVLLEAARMYWLGLPV 120 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKA 162 ++K+ FR ISTDEV+G L + LF+E Y PSSPYSA+KA Sbjct: 121 ERKEAFRLHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKA 164 >gi|225707656|gb|ACO09674.1| dTDP-D-glucose 4,6-dehydratase [Osmerus mordax] Length = 341 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 114/337 (33%), Positives = 186/337 (55%), Gaps = 15/337 (4%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG+GFIGS LVN +V+ +D + Y + SL+ + + ++F++ DIC+ Sbjct: 7 ILVTGGSGFIGSHFVCSLVNRHPDWRVINLDNMDYCASARSLERFEERDNYTFIKGDICN 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D + + AA++HV+ S + + N+ GT +LL+ + D Sbjct: 67 PRLVNHIFATENIDIVFHLAAKTHVESSFVCPSTYHRVNVEGTRVLLKG--------AFD 118 Query: 122 KKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ ISTDEVYG SLDK F E P P++PYS TKA+++ LVL++ Y PV+ Sbjct: 119 AKVA-KFVYISTDEVYGQSLDKA-FEETSPRRPTNPYSNTKAAAECLVLSYWEKYRFPVI 176 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ +N YGP F EK+IP ++ + + G R +L+VED V AL+ +L+KG Sbjct: 177 VTRSNNVYGPRQFTEKVIPRFVSLLQNDKKCTIQGTRPQSRHFLFVEDVVEALFTILEKG 236 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YNIG + E I + E+ ++ +P S + + F+ +RP D RY I+S K Sbjct: 237 IVGEIYNIGSDFEISIIQLARELTKMVRN-VPDS-DLGDWLEFVAERPQVDLRYPINSDK 294 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 ++ +GW P + G+ TV WY +N +W ++ Sbjct: 295 LR-HLGWAPAVSWAEGIRTTVKWYQENPDFWEEFTEQ 330 >gi|17568069|ref|NP_508390.1| hypothetical protein F53B1.4 [Caenorhabditis elegans] gi|1072251|gb|AAB52650.1| Hypothetical protein F53B1.4 [Caenorhabditis elegans] Length = 342 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 118/329 (35%), Positives = 179/329 (54%), Gaps = 14/329 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTY-AGNLNSLKEISQSNLFSFLQVDIC 60 +++TGG GFIGS + N K + + DKL + A L+ KEI +S + F++ + Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEAALE 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + L+E + D +++FAA +HVD S I NII T LLE S ++ Sbjct: 71 DQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLE------SIVNS 124 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSED--MPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + + ISTDEVYG D SE +P NP++PY+A+KA+ + ++ ++ H+Y Sbjct: 125 PYKGVKKLVHISTDEVYGDSFEDTTPKSESASLP-NPTNPYAASKAACEMVIRSYWHSYK 183 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P ++ +N YGP KLIP ++G L GDG + R W+YVED A+ V Sbjct: 184 LPYVMVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRV 243 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G +GE YNIG + E NI++ I F + L+ + + I DRP HDRRY I Sbjct: 244 ALEGTLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAP-IPDRPYHDRRYYI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SKI++ +GW GL KT+ +Y+ Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIDYYV 331 >gi|218662619|ref|ZP_03518549.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium etli IE4771] Length = 178 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 85/153 (55%), Positives = 113/153 (73%), Gaps = 1/153 (0%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPD 75 + R+LV+++ +VL +D LTYAGNL SLK + + + FL+ DICDR ++ A F+PD Sbjct: 1 MVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADICDRAGMQEAFASFRPD 60 Query: 76 AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDE 135 +++ AAESHVDRSI GA +FI TNI+GTF LL+ R +W L +K FRFL +STDE Sbjct: 61 IVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDARRKSDFRFLHVSTDE 120 Query: 136 VYGSL-DKGLFSEDMPYNPSSPYSATKASSDYL 167 VYGSL D+GLF E PY+PSSPYSA+KA+SD+L Sbjct: 121 VYGSLGDEGLFEETTPYDPSSPYSASKAASDHL 153 >gi|3287248|emb|CAA75866.1| dTDP-glucose-4,6-dehydratase [Streptococcus agalactiae] Length = 194 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 118/183 (64%), Gaps = 8/183 (4%) Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 YNPSSPYS+TKA+SD +V AW ++G+ +SNCSNNYGPY EK IP IT ++ G Sbjct: 1 YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIK 60 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 LYG+G+NVRDW++ DH ++ +L KGRIGE Y IG + E+ N ++ L+ + Sbjct: 61 PKLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELI 113 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNW 329 + K + + DR GHD RYAIDS+K++ E+GW PQ N GL +T+ WY +N Sbjct: 114 LEKMGQPKDAYDHVTDRAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENET 173 Query: 330 WWR 332 WW+ Sbjct: 174 WWK 176 >gi|15718523|gb|AAL06019.1|AF411225_5 putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] Length = 218 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 5/216 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA N+++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR---FLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD+F+ F QISTDEVYGSL + G F+ED Y P+SPYSA+KAS+D LV ++ HTY Sbjct: 121 FLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNSPYSASKASADMLVRSYHHTY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV 211 G+ ++SNCSNNYGP+ EKLIP I + + + Sbjct: 181 GLNAVISNCSNNYGPFQHDEKLIPTIIRNALNNAQI 216 >gi|42744598|gb|AAH66615.1| Tgds protein [Danio rerio] Length = 347 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 19/339 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS L L +++ +D L Y NL +L+ + S+ +SF+ D+CD Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ D + + AAE+HV+ S + F+ N+ GT +L+ S + Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRA--------SLE 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 Q RF+ ISTDEVYG F E P P++PYS +KA+++ +V ++ + P ++ Sbjct: 121 ASVQ-RFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVI 179 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + SN YGP EK+IP ++ + + + G G R +LYV D A V++KG Sbjct: 180 TRSSNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGI 239 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRRYAIDS 298 +GE YNIG E I + E L + KS S L + F+EDRP + RY ++S Sbjct: 240 LGEIYNIGTGFEIPIIQLARE----LVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNS 295 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 K+ +GW P+ G+ +TV WY +N +W P+ E Sbjct: 296 VKLH-RLGWRPKVAWTEGIRRTVQWYEENPNYW-PIISE 332 >gi|326433227|gb|EGD78797.1| RHM3 protein [Salpingoeca sp. ATCC 50818] Length = 509 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 68/394 (17%) Query: 1 MRLI-VTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEI------------ 46 MR+I VTGGAGFIGS + RY+ +V+V+D L Y +L +++++ Sbjct: 1 MRVILVTGGAGFIGSHVARYVYRQRPGARVIVLDNLDYCASLKNIEDLLVDGGDADPAAD 60 Query: 47 ------------------------------------SQSNLFSFLQVDICDRECIRSALK 70 S S F+F++ +CD E + + L Sbjct: 61 GDAGHDTCGLDNRSRGASELPSQQLLPAILQGKVQASPSQRFAFIRGSVCDLELMETILS 120 Query: 71 EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ 130 F+ +++FAA+SHVD S F TN++GT + LE R L R + Sbjct: 121 HFKVTVLMHFAAQSHVDNSFDSTLCFTQTNVVGTHVTLEACRRVAGQLE-------RIIH 173 Query: 131 ISTDEVYGSL----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 +STDEVYG + + P +P++PYSA+KA+++ +V A+ ++ +P++++ +N Sbjct: 174 VSTDEVYGGTKPDSEHQFLENESPLDPTNPYSASKAAAEMIVKAYQKSFRLPIIVTRGNN 233 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 YGP +PEKLIP I R + G + ++GDG R +++V D A L++ G + Y Sbjct: 234 VYGPCQYPEKLIPKFILRALHGMTLPIHGDGSQRRGYVHVRDVAAAFNLLIDHGPLHTVY 293 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIG 306 NIG +E +D+ ++ ++ + HT I + +R D RY ID + + + +G Sbjct: 294 NIGSTSEISVLDVARDVCAIVGRDV-----HT-CIEHVANRTFQDHRYLIDHANLAA-LG 346 Query: 307 WFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 W P+ GL +T+ WY + +W + L+P Sbjct: 347 WQPRVAWGEGLAETIEWYRQHGAYWGNVTAALQP 380 >gi|69244636|ref|ZP_00602900.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] gi|68196227|gb|EAN10656.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] Length = 230 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 118/186 (63%), Gaps = 8/186 (4%) Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 + PYNPSSPYS+TKA SD LV AW ++G+ +SNCSNNYGPY EK IP +T ++ Sbjct: 37 ETPYNPSSPYSSTKAGSDLLVKAWVRSFGLRATISNCSNNYGPYQHIEKFIPRQVTNILS 96 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 G LYG+G+NVRDW++ DH A++L+L KGRIGE Y IG + E N V E+ + Sbjct: 97 GIRPKLYGEGKNVRDWIHTNDHSSAVWLILTKGRIGETYLIGADGEEDN-KTVMELILEM 155 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLD 326 +Y H + DR GHD RYAIDS+K++ E+GW P+ N GL T+ WY + Sbjct: 156 MGQPKDAYDH------VNDRAGHDLRYAIDSTKLREELGWKPEFTNFRDGLADTIKWYEE 209 Query: 327 NNWWWR 332 + WW+ Sbjct: 210 HEDWWK 215 >gi|308511317|ref|XP_003117841.1| hypothetical protein CRE_00931 [Caenorhabditis remanei] gi|308238487|gb|EFO82439.1| hypothetical protein CRE_00931 [Caenorhabditis remanei] Length = 342 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 117/329 (35%), Positives = 179/329 (54%), Gaps = 14/329 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTY-AGNLNSLKEISQSNLFSFLQVDIC 60 +++TGG GFIGS + N K + + DKL + A L+ KEI +S + F++ + Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYIFVEAKLE 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + L+E + D +++FAA +HVD S I NII T LLE S ++ Sbjct: 71 DQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLE------SIVNS 124 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSED--MPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + + ISTDEVYG D SE +P NP++PY+A+KA+ + ++ ++ H+Y Sbjct: 125 PYKGVKKLVHISTDEVYGDSFEDTTPKSESASLP-NPTNPYAASKAACEMVIRSYWHSYK 183 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P ++ +N YGP KLIP ++G L GDG + R W+YVED A+ V Sbjct: 184 LPYVMVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRV 243 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G++GE YNIG + E NI++ I + L+ + + I DRP HDRRY I Sbjct: 244 ALEGKLGEIYNIGTDFEMTNIELTKMIHSTVSKLLNREPTAPTFAP-IPDRPYHDRRYYI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SKI++ +GW GL KT+ +Y+ Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIEYYV 331 >gi|167945341|ref|ZP_02532415.1| dTDP-glucose 4,6-dehydratase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 166 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 85/164 (51%), Positives = 114/164 (69%), Gaps = 2/164 (1%) Query: 20 LVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVN 79 ++N+ V+ +DKLTYAGNL SL + S ++F +VDICD+ + +E PD +++ Sbjct: 1 MINETDHHVVNLDKLTYAGNLESLATVDGSERYAFERVDICDQAEVDRVFREHHPDLVMH 60 Query: 80 FAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGS 139 AAESHVDRSI G EFI TNI G++++LE R +WS L K +FRF ISTDEVYG Sbjct: 61 LAAESHVDRSISGPAEFIQTNITGSYVMLEAARRYWSGLEGSAKARFRFHHISTDEVYGD 120 Query: 140 LD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 L+ LF+E+ PY PSSPYSA+KASSD+LV AW TY +PV++ Sbjct: 121 LEGTNDLFTEETPYAPSSPYSASKASSDHLVRAWNRTYRLPVVI 164 >gi|331012160|gb|EGH92216.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 156 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/156 (55%), Positives = 111/156 (71%), Gaps = 2/156 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGSAL R+L+N+ + +VL DKLTYAGNL SL+ I+ + F+Q DIC Sbjct: 1 MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + L+ F P AI++ AAESHVDRSI G EFI TNI+GT+ LLE TR +W L + Sbjct: 61 DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAYWLRLPE 120 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPS 154 ++ FRF ISTDEVYG L LF+E PY PS Sbjct: 121 AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPS 156 >gi|322500036|emb|CBZ35111.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 449 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 117/386 (30%), Positives = 189/386 (48%), Gaps = 68/386 (17%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSL---------------- 43 R++VTGG+GFIGSA R+L+ + V +D L Y ++++ Sbjct: 59 RILVTGGSGFIGSAFIRHLLMYAPASVHVFNLDTLEYCAGVDAVLGPLAATRDDDRAAAD 118 Query: 44 -------------------KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 ++S + + F+ I D + AL+ D IV+ AA++ Sbjct: 119 SRAPASEGANGTVASCFSSCDVSPVSRYHFIAGSILDATRVLEALRTHHIDIIVHMAAQT 178 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 HVD S + F N++GT LLE R + RFL +STDEVYG Sbjct: 179 HVDHSFSRSILFTQVNVVGTHTLLECARQYGQLT--------RFLYMSTDEVYGETP--- 227 Query: 145 FSEDMPYN-------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL 197 + P N P++PY+ATKA++++LV A+ H++ +P+L+S +N +GP +PEK+ Sbjct: 228 -ATAQPANEASTVLCPTNPYAATKAAAEHLVSAYYHSFKLPMLISRGNNVFGPGQYPEKV 286 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNI 257 IP I + + ++GDG + R ++YV+D RAL +L +G +GE YNI E Sbjct: 287 IPSFIVHALRRERLPIHGDGHHQRSFIYVDDVARALCTILVRGGVGEVYNIASEREFSVH 346 Query: 258 DIVFEI-----GFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ + G D +I S++ +R++ DR +D RY S K+ + +GW + Sbjct: 347 EVAQRVVACAAGDDHDKVIAASHADFDASYVRYVADRAYNDARYCTGSEKLAA-LGWAQE 405 Query: 311 ENMESGLNKTVCWY----LDNNWWWR 332 + E GL +TV WY L +WR Sbjct: 406 VSFEEGLRRTVGWYRRHPLKAGGYWR 431 >gi|302904014|ref|XP_003048984.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729918|gb|EEU43271.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 459 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 115/347 (33%), Positives = 190/347 (54%), Gaps = 23/347 (6%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI + R+LV ++ DKL Y +LN+ + ++ F+F DI Sbjct: 54 IMITGGAGFIACWVVRHLVLAYPHAYNIVSFDKLDYCSSLNNTRVLNDKPNFNFYHGDIT 113 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + ++ + D +++FAA+SHVD S + +F TN+ GT +LLE R Sbjct: 114 NPTEVVDCMERYGIDTVMHFAAQSHVDLSFGQSYDFTYTNVYGTHVLLESAR-------- 165 Query: 121 DKKDQFRFLQISTDEVYGSLDK---GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K RF+ +STDEVYG +++ GL E P++PY+A+KA+++ LV ++ ++ + Sbjct: 166 -KVGIRRFIYVSTDEVYGEVEEGEDGLL-ETSSLAPTNPYAASKAAAEMLVQSYQKSFKL 223 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P ++ +N YGP+ +PEK+IP + + L+GDG R +LY D A +L Sbjct: 224 PAMIVRSNNVYGPHQYPEKIIPKFTCLLNRRRPLVLHGDGTPTRRYLYAGDAADAFDTIL 283 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHT--ELIRFIEDRPGHDRRY 294 KG++G+ YNIG +E N+++ LLD + IP + I+ DRP +DRRY Sbjct: 284 HKGQVGQVYNIGSCDEVSNLELC---ALLLDRISIPHDTPEQLRKWIKHTRDRPFNDRRY 340 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD-NNWWWRPLYKELKP 340 A+D +K++ +GW + ++ GL TV W+ WW + L P Sbjct: 341 AVDDTKLR-RLGWEQKVSIHEGLKITVDWFTQFGESWWGDISHALAP 386 >gi|157871359|ref|XP_001684229.1| GDP-mannose 4,6 dehydratase [Leishmania major strain Friedlin] gi|68127297|emb|CAJ05556.1| putative GDP-mannose 4,6 dehydratase [Leishmania major strain Friedlin] Length = 446 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 68/386 (17%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSL---------------- 43 R++VTGG GFIGSA R+L+ + V +D + Y ++++ Sbjct: 61 RILVTGGCGFIGSAFIRHLLMYAPASVHVFNLDTVEYCAGVDAVLGPLAATRDDDRAAAC 120 Query: 44 -------------------KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 ++S + + F+ I D + +L+ D IV+ AA++ Sbjct: 121 SGASVSEDANGTVASCSLSCDVSPVSRYHFIAGSILDATLVLHSLRTHHIDIIVHMAAQT 180 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 HVD S + F N++GT LLE R + RFL +STDEVYG + Sbjct: 181 HVDHSFSRSVLFTQVNVVGTHTLLECARQYGQLT--------RFLHMSTDEVYGEVP--- 229 Query: 145 FSEDMPYN-------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL 197 + P N P++PY+ATKA++++LV A+ H++ +PVL+S +N +GP +PEK+ Sbjct: 230 -ATARPANEASTVLCPTNPYAATKAAAEHLVSAYYHSFKLPVLISRGNNAFGPGQYPEKV 288 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNI 257 IP I + + ++GDG + R ++YV+D RAL +L +G +GE YN+ E Sbjct: 289 IPSFIVHALRRERLPIHGDGHHQRRFIYVDDVARALCTILVRGGVGEVYNVASEREFSVH 348 Query: 258 DIVFEI-----GFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ + G D +I S + +R++ DR +D RY +S K+ + +GW + Sbjct: 349 EVAQRVVACVAGDDHDKVIAASRADFDASYVRYVADRAYNDARYCTESEKLAA-LGWALE 407 Query: 311 ENMESGLNKTVCWY----LDNNWWWR 332 + E GL +TV WY L +WR Sbjct: 408 VSFEEGLRRTVAWYRRHPLKAGGYWR 433 >gi|325145401|gb|EGC67677.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240013] gi|325145447|gb|EGC67722.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240013] Length = 162 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/160 (53%), Positives = 114/160 (71%), Gaps = 2/160 (1%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSA 159 + + FRF ISTDEVYG L LF+E PY PSSPYSA Sbjct: 123 QHEAFRFHHISTDEVYGDLRGTDDLFTETAPYAPSSPYSA 162 >gi|268578633|ref|XP_002644299.1| Hypothetical protein CBG14085 [Caenorhabditis briggsae] gi|187027667|emb|CAP32737.1| hypothetical protein CBG_14085 [Caenorhabditis briggsae AF16] Length = 342 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 116/329 (35%), Positives = 176/329 (53%), Gaps = 14/329 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTY-AGNLNSLKEISQSNLFSFLQVDIC 60 +++TGG GFIGS + N K + + DKL + A L+ KEI +S + F++ + Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEAKLE 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + L E + D +++FAA +HVD S I NII T LLE S ++ Sbjct: 71 DQPTLIKTLAENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLE------SIVNS 124 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSED--MPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + + ISTDEVYG D SE +P NP++PY+A+KA+ + ++ ++ H+Y Sbjct: 125 PYKGVKKLVHISTDEVYGDSFEDTTPKSESASLP-NPTNPYAASKAACEMVIRSYWHSYK 183 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P ++ +N YGP KLIP ++G L GDG + R W+YVED A+ V Sbjct: 184 LPYVMVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRV 243 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G +GE YNIG + E NI++ I + ++ + + I DRP HDRRY I Sbjct: 244 ALEGTLGEIYNIGTDFEMTNIELTKMIHSTVSKILNREPTAPTFAP-IPDRPYHDRRYYI 302 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SKIK+ +GW GL T+ +Y+ Sbjct: 303 DFSKIKNAMGWQCTTPFSEGLMTTIEYYV 331 >gi|68484617|ref|XP_713768.1| hypothetical protein CaO19.3674 [Candida albicans SC5314] gi|68484686|ref|XP_713734.1| hypothetical protein CaO19.11158 [Candida albicans SC5314] gi|46435245|gb|EAK94631.1| hypothetical protein CaO19.11158 [Candida albicans SC5314] gi|46435280|gb|EAK94665.1| hypothetical protein CaO19.3674 [Candida albicans SC5314] Length = 320 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 176/320 (55%), Gaps = 23/320 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++V+GGAGFIG Y+V IDKL YA N ++ + + F F+ +D+ Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D I+NFAAES VDRS F NI+ T LLE RL S Sbjct: 68 DNLEYLLKITKNTTD-IINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSI--- 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL ISTDEVYG + +G E+ NP++PYSA+KA+ D ++ ++ ++Y +P+ Sbjct: 124 -----GYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPIT 178 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +PEK+IPL I + E + ++G G N R +LYV D V A+ V K Sbjct: 179 ILRPNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKN 238 Query: 241 ---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + YNIGG +E N+ ++ LI + + E I+FI+DR +D Y+ID Sbjct: 239 PMTTVNQIYNIGGTDELDNLSLI--------KLIMEIFGRGE-IQFIKDRNYNDTNYSID 289 Query: 298 SSKIKSEIGWFPQENMESGL 317 ++KI + +GW P+ ++ GL Sbjct: 290 TTKIHN-LGWSPKISLVQGL 308 >gi|146090416|ref|XP_001470561.1| GDP-mannose 4,6 dehydratase [Leishmania infantum JPCM5] gi|134070594|emb|CAM68940.1| putative GDP-mannose 4,6 dehydratase [Leishmania infantum JPCM5] Length = 449 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 117/386 (30%), Positives = 188/386 (48%), Gaps = 68/386 (17%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSL---------------- 43 R++VTGG+GFIGSA R+L+ + V +D L Y ++++ Sbjct: 59 RILVTGGSGFIGSAFIRHLLMYAPASVHVFNLDTLEYCAGVDAVLGPLAATRDDDRAAAD 118 Query: 44 -------------------KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 ++S + + F+ I D + AL+ D IV+ AA++ Sbjct: 119 SRAPASEGANGTVASCFLSCDVSPVSRYHFIAGSILDATRVLEALRTHHIDIIVHMAAQT 178 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 HVD S + F N++GT LLE R + RFL +STDEVYG Sbjct: 179 HVDHSFSRSILFTQVNVVGTHTLLECARQYGQLT--------RFLYMSTDEVYGETP--- 227 Query: 145 FSEDMPYN-------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL 197 + P N P++PY+ATKA++++LV A+ H++ +P+L+S +N +GP +PEK+ Sbjct: 228 -ATAQPANEASTVLCPTNPYAATKAAAEHLVSAYYHSFKLPMLISRGNNVFGPGQYPEKV 286 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNI 257 IP I + + ++GDG + R ++YV+D RAL +L +G +GE YNI E Sbjct: 287 IPSFIVHALRRERLPIHGDGHHQRSFIYVDDVARALCTILVRGGVGEVYNIASEREFSVH 346 Query: 258 DIVFEI-----GFLLDALIPKSYS--HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ + G D +I S + +R++ DR +D RY S K+ + +GW + Sbjct: 347 EVAQRVVACAAGDDHDKVIAASRADFDASYVRYVADRAYNDARYCTGSEKLAA-LGWAQE 405 Query: 311 ENMESGLNKTVCWY----LDNNWWWR 332 + E GL +TV WY L +WR Sbjct: 406 VSFEEGLRRTVGWYRRHPLKAGGYWR 431 >gi|238879303|gb|EEQ42941.1| hypothetical protein CAWG_01166 [Candida albicans WO-1] Length = 320 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 115/320 (35%), Positives = 175/320 (54%), Gaps = 23/320 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++V+GGAGFIG Y+V IDKL YA N ++ + + F F+ +D+ Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D ++NFAAES VDRS F NI+ T LLE RL S Sbjct: 68 DNLEYLLKITKNTTD-MINFAAESSVDRSFEDPVYFTKNNILATQNLLECHRLNPSI--- 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL ISTDEVYG + +G E+ NP++PYSA+KA+ D ++ ++ ++Y +P+ Sbjct: 124 -----GYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPIT 178 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +PEK+IPL I + E + ++G G N R +LYV D V A+ V K Sbjct: 179 ILRPNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDLVLAIETVWIKN 238 Query: 241 ---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + YNIGG +E N+ + I +++ P I+FI+DR +D Y+ID Sbjct: 239 PMTTVNQIYNIGGTDELDNLSL---IKLIMEIFGPGE------IQFIKDRNYNDTNYSID 289 Query: 298 SSKIKSEIGWFPQENMESGL 317 ++KI + +GW P+ ++ GL Sbjct: 290 TTKIHN-LGWSPKISLVQGL 308 >gi|255730795|ref|XP_002550322.1| hypothetical protein CTRG_04620 [Candida tropicalis MYA-3404] gi|240132279|gb|EER31837.1| hypothetical protein CTRG_04620 [Candida tropicalis MYA-3404] Length = 321 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 178/321 (55%), Gaps = 25/321 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGGAGFIG Y+V ++ IDKL YA N + +K++ F F+Q+D+ Sbjct: 8 KVLVTGGAGFIGCNFLSYIVPKYPQVHFTCIDKLNYASNSHIIKQLELLPNFCFIQLDLS 67 Query: 61 DRECIRSALKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + L + D I+NFAAES VDRS F NI T LLE RL Sbjct: 68 ES---LEKLLDITRDTTDIINFAAESCVDRSFSEPLYFTKNNIFATQNLLECHRL----- 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ L ISTDEVYG + +D NP++PYSA+KA+ D ++ ++ ++Y +P Sbjct: 120 ---NRNINYILHISTDEVYGESVSNVVEDDHLMNPTNPYSASKAAIDLIIQSYQYSYKLP 176 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N YGP +PEK+IPL I + E + + ++G+G N R +LYV D V A+ ++ K Sbjct: 177 ITILRPNNVYGPLQYPEKIIPLTIKCLHEKTPIPIHGNGTNKRRYLYVLDLVLAIEIIWK 236 Query: 239 KGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +I + YN+GG +E N +V LI + I++++DR +D Y+I Sbjct: 237 SQQITTNQIYNVGGTDELDNNSLV--------NLIMNVFQTPGEIQYVKDRKYNDSSYSI 288 Query: 297 DSSKIKSEIGWFPQENMESGL 317 D++K+ + +GW P+ ++ GL Sbjct: 289 DTTKLAA-LGWEPKISITQGL 308 >gi|300909839|ref|ZP_07127300.1| dTDP glucose 4,6-dehydratase [Lactobacillus reuteri SD2112] gi|300893704|gb|EFK87063.1| dTDP glucose 4,6-dehydratase [Lactobacillus reuteri SD2112] Length = 264 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/253 (40%), Positives = 144/253 (56%), Gaps = 36/253 (14%) Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP----- 150 FI TNI+GT +L+ R K R+ ISTDEVYG L ED+P Sbjct: 17 FIQTNIVGTSVLINACR----------KYDVRYHHISTDEVYGDLP---LREDLPGHGEG 63 Query: 151 ----YNPSSPYSATKASS------DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPL 200 + P SPY + S D LV AW ++G+ +SNCSNNYGPY EK IP Sbjct: 64 KGEKFTPESPYRPSSPYSSSKASSDLLVRAWVRSFGLRATISNCSNNYGPYQHIEKFIPR 123 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 IT ++ G LYG G+NVRDW++ DH RA++ +L KG+IGE Y IG + E+ N + V Sbjct: 124 QITNILSGIRPKLYGSGKNVRDWIHTNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-V 182 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNK 319 E+ L +Y H ++DRPGHD RYAID++K+++E+GW P+ + ++GL Sbjct: 183 LEMILELMGQPKDAYDH------VKDRPGHDLRYAIDATKLRTELGWEPEFTDFKTGLQH 236 Query: 320 TVCWYLDNNWWWR 332 T+ WY ++ WW+ Sbjct: 237 TIDWYTEHQDWWK 249 >gi|328868948|gb|EGG17326.1| putative dTDP-D-glucose 4,6-dehydratase [Dictyostelium fasciculatum] Length = 266 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 150/246 (60%), Gaps = 12/246 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIGS L +L +++V+DKL Y +L +L EI + F + I Sbjct: 27 ILLTGGAGFIGSHLTIHLCKKYIQSNARIIVLDKLDYCSSLKNLSEIEHYTNYRFYKGSI 86 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +++ ++ L + D +++ AA SHVD S + +F NI+GT +LL+E R + Sbjct: 87 LEKKLVKQILTDESIDTVIHLAAYSHVDASFKDSLKFTKNNIMGTHVLLDECRKYGGIQ- 145 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYGS ++ E Y P++PYSA+KAS++ LVL++ ++ P Sbjct: 146 -------RFINVSTDEVYGSQPEQTDIDEQCNYRPTNPYSASKASAELLVLSFHQSFSFP 198 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++++ C+N YGP FPEKLIP I +++ + ++G G N+R +L+++D ++A ++L Sbjct: 199 IIITRCNNVYGPNQFPEKLIPKFINQLLNQNPCTIHGKGDNLRSFLFIDDVIKAFDIILH 258 Query: 239 KGRIGE 244 + +IGE Sbjct: 259 RAKIGE 264 >gi|289811166|ref|ZP_06541795.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 149 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 78/139 (56%), Positives = 104/139 (74%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSA+ R+++++ V+V+DKLTYAGNL SL ++QS+ F+F +VDICD Sbjct: 3 RILVTGGAGFIGSAVVRHIIHETADAVVVVDKLTYAGNLMSLASVAQSDRFAFEKVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +++QPD++++ AAESHVDRSI G FI TNI+GT+ LLE R +WS L D Sbjct: 63 RASLEQVFQQYQPDSVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWSALDAD 122 Query: 122 KKDQFRFLQISTDEVYGSL 140 K FRF ISTDEVYG L Sbjct: 123 AKAAFRFHHISTDEVYGDL 141 >gi|167524601|ref|XP_001746636.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774906|gb|EDQ88532.1| predicted protein [Monosiga brevicollis MX1] Length = 327 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 49/345 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL++TGGAGFI S + ++ + + +++V+D L Y N +L E + +F+ DI Sbjct: 19 RLLITGGAGFIASHVAKHFLTTYETYELVVVDALMYCANRRNLPEHPR---LTFVHGDIT 75 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + D I++FAA++HVDRS + F N++GT ++LE +L Sbjct: 76 DLAAVEHLLCTHRCDTILHFAAQTHVDRSFANSFSFTHNNMLGTHVMLEAAKL------- 128 Query: 121 DKKDQFRFLQISTDEVYGSL----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 F+ +STDEVYG D+ + P NP++PY+A+KA+++ +V A+ +Y Sbjct: 129 -------FVHVSTDEVYGETVPGEDRHFLEKISPLNPTNPYAASKAAAEMMVKAYQKSYD 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV+++ +N YGP+ PEKL+P I + + + L+GDG R +++V+D RA ++ Sbjct: 182 LPVIVTRGNNVYGPHQHPEKLVPKLIYQALRDQCLTLHGDGSQQRGYVFVQDVARAFDIL 241 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI-RFIEDRPGHDRRYA 295 + +G G L L+ S T + R +DR DRRY Sbjct: 242 VHRG----------------------TGLHLLRLLTGS---TRICNRRTQDRCFQDRRYL 276 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 + + + ++GW P + GL T+ W ++ +W L L+P Sbjct: 277 VANENLL-QLGWAPGTSWRDGLRSTIAWQREHPDYWPDLEAALEP 320 >gi|322822907|gb|EFZ28818.1| GDP-mannose 4,6 dehydratase, putative [Trypanosoma cruzi] Length = 337 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 165/309 (53%), Gaps = 20/309 (6%) Query: 26 IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESH 85 + V +DK+ Y + S++ S + + F++ +I + + + L+ D I+NFAA+SH Sbjct: 7 VHVYNLDKVDYCSSFRSIENPSDPH-YHFVKGNITNADLVMYVLRHHDIDTIINFAAQSH 65 Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF 145 VD S + F N++GT +LLE R + +F+ +STDEVYG + Sbjct: 66 VDNSFGNSLSFTYNNVLGTHVLLECARTYGRIE--------KFIHVSTDEVYGQVTDS-N 116 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 E+ NP++PY+ATKA+ +Y+V ++ ++G+P +++ +N YGPY +PEKLIP I M Sbjct: 117 KEEGTLNPTNPYAATKAAVEYIVKSYHISFGLPCIITRGNNVYGPYQYPEKLIPRFIMLM 176 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDI------ 259 G + + G+G N R +++ D RA ++ G IG+ YNIG +E+ +DI Sbjct: 177 NAGKKLTIQGNGSNKRTFIHASDVARAFVAIINHGFIGDVYNIGSCDEKSVLDIARMTVK 236 Query: 260 ---VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 + G P + + F +DR +D RY I K++ E+GW + E G Sbjct: 237 YVQAHKCGERQPLADPSEEDVSRHLVFEKDREFNDERYDISVEKLQ-ELGWRQEVRFEEG 295 Query: 317 LNKTVCWYL 325 +TV WYL Sbjct: 296 YKETVAWYL 304 >gi|19113649|ref|NP_596857.1| nucleotide-sugar 4,6-dehydratase (predicted) [Schizosaccharomyces pombe 972h-] gi|74624450|sp|Q9HDU4|YHEB_SCHPO RecName: Full=Uncharacterized protein PB2B2.11 gi|12056494|emb|CAC21413.1| nucleotide-sugar 4,6-dehydratase (predicted) [Schizosaccharomyces pombe] Length = 365 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 121/358 (33%), Positives = 193/358 (53%), Gaps = 43/358 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSL---KEISQSNLFSFLQVDI 59 ++TGGAGFIGS Y V+ IDKL+Y N ++ K ++Q N F FL++D+ Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPN-FRFLEMDL 71 Query: 60 CDRECIRSALKEFQPD--------AIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 L +F + I+NFAAES VDRS + F NI+ T LLE Sbjct: 72 ATN---YKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECV 128 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLA 170 R+ ++ +++ F+ +STDEVYG D+ E NP+SPY+A+KA+ D ++ + Sbjct: 129 RILLGK-KEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVDLIIQS 187 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM----------IEGSHVFLYGDGQNV 220 + ++Y I V + +N YGP + EKLIP+ + ++ I + L+GDG + Sbjct: 188 YRYSYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHK 247 Query: 221 RDWLYVEDHVRALYLV-LKKGR-----------IGERYNIGGNNERKNIDIVFEIG--FL 266 R +L++ D + A+ LV +K+G G+ +NIG ++E N+ +V I FL Sbjct: 248 RKYLHIYDFINAIDLVWMKQGSEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFICDYFL 307 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L K+ +++ I F++DR +D RY+++ KIKS +GW PQ +E+GL K + Y Sbjct: 308 YRKLSLKNLDYSKYITFVQDRNYNDSRYSLNYEKIKS-LGWRPQIPLETGLRKLIDEY 364 >gi|289613103|emb|CBI59919.1| unnamed protein product [Sordaria macrospora] Length = 514 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 35/314 (11%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 FSF + DI + + LK + D I +FAA+SHVD S F TN+ GT +LLE Sbjct: 74 FSFYKGDITNPSEVMDCLKRYNIDTIFHFAAQSHVDLSFGDPFGFTHTNVYGTHVLLESA 133 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 R K RF+ +STDEVYG + D+ E P++PY+A+KA+++ LV Sbjct: 134 R---------KVGINRFIHVSTDEVYGEVKDDEDDLLETSILAPTNPYAASKAAAEMLVN 184 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ ++ +PV++ +N YGP+ +PEK+IP + G V L+GDG R +LY D Sbjct: 185 SYKKSFKLPVIIVRSNNVYGPHQYPEKIIPKFTCLLARGKPVVLHGDGSPTRRYLYASDA 244 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD--------------------- 268 A +L +G++GE YN+G +E N+ + ++ ++ Sbjct: 245 ADAFDTILHRGQLGEIYNVGSYDEISNLSLCHKLLSEMEIISPRSPSSSPPCNYTTSPAS 304 Query: 269 -ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD- 326 L+ + +++ DRP +D RYA+D +K++ ++GW P+++ E GL TV WY Sbjct: 305 SPLVAEQEEFYRWVKYTHDRPFNDHRYAVDGTKLR-KLGWEPKKSFEEGLRITVDWYRRF 363 Query: 327 NNWWWRPLYKELKP 340 WW + L P Sbjct: 364 GERWWGDITNVLTP 377 >gi|116207954|ref|XP_001229786.1| hypothetical protein CHGG_03270 [Chaetomium globosum CBS 148.51] gi|88183867|gb|EAQ91335.1| hypothetical protein CHGG_03270 [Chaetomium globosum CBS 148.51] Length = 476 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 115/383 (30%), Positives = 187/383 (48%), Gaps = 59/383 (15%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + ++ F+F Q D+ Sbjct: 51 IMITGGAGFIACWLVRHLTLTYPHAYNIISFDKLDYCASLNNTRILNDRRNFTFYQGDVT 110 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 111 NPSEVVDCLERYNIDTIFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE---------SA 161 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ +STDEVYG + G E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 162 KKVGIRRFIHVSTDEVYGEVKDGDDDLLESSILAPTNPYAASKAAAEMLVHSYQKSFKLP 221 Query: 179 VLLSNCSNNYGPYHFPEKL-------------------IPLAITRMIEGSHV-------- 211 ++ +N YGP+ +PE P ++ R HV Sbjct: 222 AIIVRSNNVYGPHQYPESTHAPPPHPPPPSFIIHTNPPPPPSLLRNYPQIHVPPRTPQTG 281 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 L+GDG R +LY D A +L +G+ G+ YN+G ++E N+ + L A++ Sbjct: 282 RLHGDGSPTRRYLYAGDAADAFDTILHRGQPGQIYNVGSHDEISNVALCRR----LLAVM 337 Query: 272 PKSYSHTEL-------------IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 + H + +++ DRP +D RYA+D++K++ +GW + +E GL Sbjct: 338 GLAQQHDDDDDDDDDDDAFRRWVKYTHDRPFNDHRYAVDATKLRG-LGWEQKTGLEEGLR 396 Query: 319 KTVCWY-LDNNWWWRPLYKELKP 340 TV WY L WW + K L P Sbjct: 397 VTVEWYRLFGERWWGDITKVLSP 419 >gi|260949070|ref|XP_002618832.1| hypothetical protein CLUG_02291 [Clavispora lusitaniae ATCC 42720] gi|238848704|gb|EEQ38168.1| hypothetical protein CLUG_02291 [Clavispora lusitaniae ATCC 42720] Length = 357 Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 195/348 (56%), Gaps = 35/348 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNL---FSFLQVD 58 +VTGGAGF+GS + L+ + +V+ IDKL+YA +S K I ++ F FLQ D Sbjct: 5 FLVTGGAGFMGSHMVDLLLQEYPNHKVVCIDKLSYAC-YHSTKNIERALRNPNFRFLQWD 63 Query: 59 IC-DRECIRSALKE----FQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + D E + L E + ++NFAAE+ VDRS F T NI+G LLE R Sbjct: 64 LAQDYELLHKLLVEDWESSRITTVLNFAAETCVDRSFDAPLYFTTNNIVGLQNLLECLRH 123 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + + + + RF+ +STDEVYG + +E+ P+SPY+ATKA+ D ++ A+ Sbjct: 124 LFE-RRPELRSKLRFVHVSTDEVYGEQEPWESSAEESALKPTSPYAATKAACDLIIGAYV 182 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----------GSHVFLYGDGQNVRD 222 ++ + + +N YGP FPEKL+ + +T++ + S + L+G G+ R Sbjct: 183 KSFQVAATIVRPNNVYGPRQFPEKLVSVCLTQLQKVRSSSDALALESRIPLHGSGEYTRM 242 Query: 223 WLYVEDHVRALYLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALI-----PK 273 +L+V D VRA+ ++LKK E +NIG +E NI V ++DA + + Sbjct: 243 YLHVFDFVRAVNVILKKTHSLEGELPVFNIGTADEISNIRFV---QMIIDAYMRIRFGQE 299 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + +++ IRF++DR +D+RYAIDSSK+K+ +GW Q ++E G+ + V Sbjct: 300 NTDYSKYIRFVKDRNYNDKRYAIDSSKVKA-LGWRQQVSLEEGITQLV 346 >gi|326781936|ref|YP_004322338.1| nucleotide-sugar epimerase [Synechococcus phage S-SM2] gi|310003126|gb|ADO97524.1| nucleotide-sugar epimerase [Synechococcus phage S-SM2] Length = 339 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 117/359 (32%), Positives = 185/359 (51%), Gaps = 53/359 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFI L ++ +V+ +D+L Y+GNLN L ++ L D Sbjct: 3 RVLITGGAGFIAHHLIGQILETTDWEVITLDRLDYSGNLNRLHDL-------MLSFDPEV 55 Query: 62 RECIRSA---LK-EFQP---------DAIVNFAAESHVDRSILGADEFITTNIIGTFILL 108 R+ +R LK E P D I++ AA SHVDRSI EF+ N++GT +L Sbjct: 56 RKRVRVVHHDLKAELNPMVCREIGNVDYILHLAAGSHVDRSIEYPLEFVMDNVVGTCNIL 115 Query: 109 EETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYL 167 + R K++ RF+ STDEV+G G+ + E+ YN ++PYSA+KA + L Sbjct: 116 DFAR-------TQKENLERFIYFSTDEVFGPAPDGIKYKENDRYNSTNPYSASKAGGEEL 168 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV----RDW 223 +A+ +TYG+P+ +++ N +G PEK IP+ I ++ G V ++ D R + Sbjct: 169 AVAYENTYGLPIYITHTMNVFGERQHPEKFIPMCIRKVRNGESVTIHSDSTKTVPGSRHY 228 Query: 224 LYVEDHVRA-LYLVLKKGRIG--------ERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 ++ ED A L+LV +G ++NI G E N++ L +I +S Sbjct: 229 IHAEDVASAILFLVNHEGGFEPTWGNAKCPKFNIVGAEELNNLE--------LAQIIAES 280 Query: 275 YSHT---ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 E++ F RPGHD RYA+D K+K E+GW P +++ +++ W L N W Sbjct: 281 QGKELKYEMVDFHSSRPGHDLRYALDGDKMK-ELGWVPAKSVRERISEVTRWTLANERW 338 >gi|150864748|ref|XP_001383713.2| putative dtdp-glucose 4,6-dehydratase [Scheffersomyces stipitis CBS 6054] gi|149386004|gb|ABN65684.2| putative dtdp-glucose 4,6-dehydratase [Scheffersomyces stipitis CBS 6054] Length = 332 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/325 (36%), Positives = 177/325 (54%), Gaps = 15/325 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLN--SLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS Y V IDKL YA + SL + F+F+++D+ Sbjct: 9 VLVTGGAGFIGSNFLEYFVRKYPNYHFTCIDKLNYASQCSTASLSVLKGYPNFTFIKLDL 68 Query: 60 CD-----RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + R+ + Q IVNFAAES VD+S F NI+ T LLE RL Sbjct: 69 SESFSELRQLLVEDFPINQITDIVNFAAESSVDKSFSDPLYFTRNNILVTQNLLECMRLL 128 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 Q+ + R L ISTDEVYG D L E P++PY+ATKAS D ++ ++ + Sbjct: 129 KQ---QNSQISVRLLHISTDEVYGDSDI-LNDEQGRLLPTNPYAATKASIDLIIHSYQCS 184 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y + V + +N YGP+ +P+K++P+ I R+ +G + ++G G N R +L+V+D + AL Sbjct: 185 YDLSVTIIRPNNIYGPHQYPDKIVPVTIERLTKGIKIPIHGIGSNKRRYLHVQDFLDALE 244 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ + I E YN+G + E N+ +V I L D + K + + ++FI DR +D + Sbjct: 245 LIWQNDESINEIYNVGSDEEISNLSLVKLICHLYDRKLTKEQINDK-VQFIPDRNYNDMK 303 Query: 294 YAIDSSKIKSEIGWFPQENMESGLN 318 Y+ KIKS +GW P+ + GL+ Sbjct: 304 YSTTCGKIKS-LGWKPRIKLVDGLS 327 >gi|224823819|ref|ZP_03696928.1| NAD-dependent epimerase/dehydratase [Lutiella nitroferrum 2002] gi|224604274|gb|EEG10448.1| NAD-dependent epimerase/dehydratase [Lutiella nitroferrum 2002] Length = 180 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/166 (52%), Positives = 113/166 (68%), Gaps = 2/166 (1%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + + VL +DKLTYAGNL++L + + F++ DI DR Sbjct: 2 ILVTGGAGFIGSNFVLDWLAGSEEPVLNLDKLTYAGNLDTLASLKDDSRHVFVRGDIGDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + L E +P A++NFAAESHVDRSI G EFI TN++GTF LLE R +W+ L Sbjct: 62 ELLAHLLTEHRPRAVINFAAESHVDRSISGPGEFIQTNVVGTFNLLEAVRGYWNDLKVAD 121 Query: 123 KDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDY 166 K FRFL +STDEVYG+L G F+E PY P+SPYSA+KA+SD+ Sbjct: 122 KQSFRFLHVSTDEVYGTLLPGDSPFTETHPYEPNSPYSASKAASDH 167 >gi|255580837|ref|XP_002531238.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223529157|gb|EEF31135.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] Length = 622 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 165/342 (48%), Gaps = 68/342 (19%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG AGFI S +C L+ N +++V+DKL Y NL +L S F F++ DI Sbjct: 9 ILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L D I++FAA++HVD S + EF NI GT +LLE ++ Sbjct: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--- 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF---SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ +STDEVYG D+ E P++PYSATKA ++ LV+A+G +YG+P Sbjct: 126 -----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +N YGP FPEKLIP I ++G + ++GD D+L Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGD-----DFL-------------- 221 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 N +I V E+RP +D+RY +D Sbjct: 222 ------------NGSEASIKFV------------------------ENRPFNDQRYFLDD 245 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 K+K+ IGW E GL KT+ WY+ N WW + L P Sbjct: 246 QKLKN-IGWSEHTTWEEGLKKTMEWYVQNPDWWGDVTGALLP 286 >gi|291515015|emb|CBK64225.1| dTDP-D-glucose 4,6-dehydratase [Alistipes shahii WAL 8301] Length = 175 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 80/155 (51%), Positives = 105/155 (67%), Gaps = 1/155 (0%) Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P +++NCSNNYGPY FPEKLIPL I + + +YG G+NVRDWLYVEDH RA+ ++ Sbjct: 1 MPTIVTNCSNNYGPYQFPEKLIPLFINNIRHRKPLPVYGKGENVRDWLYVEDHARAIDVI 60 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHDRRYA 295 G I + YNIGG NE KNIDI+ + +D L+ + + +LI ++ DRPGHD RYA Sbjct: 61 FHHGHIADTYNIGGFNEWKNIDIIKVLIKTVDRLLGRPEGADLDLITYVTDRPGHDARYA 120 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IDS K++ E+GW P E G+ KTV WYL N W Sbjct: 121 IDSRKLQDELGWEPSLQFEEGIEKTVQWYLHNQEW 155 >gi|303291304|ref|XP_003064938.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas pusilla CCMP1545] gi|226453609|gb|EEH50918.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas pusilla CCMP1545] Length = 777 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 109/337 (32%), Positives = 176/337 (52%), Gaps = 19/337 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG-NLNSLKEISQSNLFSFLQVDIC 60 ++I+TGG GFIG + +L ++VIDKL+YA + L++ + D+ Sbjct: 419 KIIITGGCGFIGHHVVEHLAKTTDCNLVVIDKLSYASLGYDRLRDTGVLDRVKVFTTDLV 478 Query: 61 DR--ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 E I L + IV+ AAE+HVD SI FI N+ T LLE TR L Sbjct: 479 QPIPEGIAYELGN-NIEFIVHMAAETHVDNSIADPVPFIRNNVESTISLLEYTR----GL 533 Query: 119 SQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ D F STDEV+G + +F E + P++PYS++K++++ + +A+ +TY I Sbjct: 534 IRNGCDLKAFFYFSTDEVFGPAFGTTMFDEWDRHKPTNPYSSSKSAAENICIAYENTYKI 593 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL--YGDGQ--NVRDWLYVEDHVRAL 233 P+++ N N +G PEK IP I ++I+ VF+ Y D + R +++ + A+ Sbjct: 594 PLMIVNVMNAFGERQHPEKFIPKCIKKVIDNEKVFIHSYPDRKMSGTRFYIHARNIAAAV 653 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L +G IGE+YNI G +E N+++ F+ D K E++ RPGHD R Sbjct: 654 VFLLNEGAIGEKYNITGESEVSNLELAH---FIADTA--KKTLVYEMVNHHATRPGHDLR 708 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 Y + K+ +++GW P E L K + W + N+ W Sbjct: 709 YGLSGEKM-AKMGWVPPFGFEESLRKCIQWTIANSHW 744 >gi|149244550|ref|XP_001526818.1| hypothetical protein LELG_01646 [Lodderomyces elongisporus NRRL YB-4239] gi|146449212|gb|EDK43468.1| hypothetical protein LELG_01646 [Lodderomyces elongisporus NRRL YB-4239] Length = 328 Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 188/328 (57%), Gaps = 34/328 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQS-NLFSFLQVDI 59 +++VTGGAGFIG+ L ++ ++ I + +DKL YA N+ +K S+S F F +D+ Sbjct: 8 KVLVTGGAGFIGTCLLQHFLSKYPHIYFVCVDKLNYASNVEEIKRFSKSFKNFRFCHLDL 67 Query: 60 C-DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + + +++F I+N AAES VDRS L F N+I T LLE RL + Sbjct: 68 SQDLQEVINLVRDFGITDIINLAAESSVDRSFLDPVLFTKNNVIATQNLLECLRLLLPQI 127 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + FL +STDEVYG + + +E+ NP++PYSA+KA +D L+ A+ ++ +P Sbjct: 128 N-------YFLHMSTDEVYG--ETQVATEESALNPTNPYSASKALADLLIQAYKQSFQLP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + +N +GP FPEKLIPL + G V ++G G+N R +LY+ D + A+ ++ Sbjct: 179 ITIIRPNNVFGPNQFPEKLIPLVMQCGQTGKKVPIHGTGKNKRLFLYISDLLDAIEMLFF 238 Query: 239 KGR---IGERYNIGGNNER--KNIDIVFEI----GFLLDALIPKSYSHTELIRFIEDRPG 289 + R +GE YN+G + +N ++V +I GF +D I ++ DR Sbjct: 239 EHRVESVGEIYNVGHSEASLIENREVVHQINEIFGFSVD------------IEYVRDRKY 286 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGL 317 +D+ Y++++SKI S +GW P+ ++ GL Sbjct: 287 NDKFYSMNTSKIYS-LGWTPKVSLRRGL 313 >gi|332756882|gb|EGJ87227.1| dTDP-glucose 4,6-dehydratase domain protein [Shigella flexneri 2747-71] gi|333017155|gb|EGK36476.1| dTDP-glucose 4,6-dehydratase domain protein [Shigella flexneri K-304] Length = 152 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 75/131 (57%), Positives = 94/131 (71%) Query: 200 LAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDI 259 + I +EG + +YG G +RDWLYVEDH RALY V+ +G+ GE YNIGG+NE+KNID+ Sbjct: 1 MVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDV 60 Query: 260 VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 V I LLD ++PK S+ E I ++ DRPGHDRRYAID+ KI E+GW PQE ESG+ K Sbjct: 61 VLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRK 120 Query: 320 TVCWYLDNNWW 330 TV WYL N W Sbjct: 121 TVEWYLANTNW 131 >gi|311977513|ref|YP_003986633.1| putative dTDP-D-glucose 4,6-dehydratase [Acanthamoeba polyphaga mimivirus] gi|82000344|sp|Q5UR12|TGDS_MIMIV RecName: Full=Putative dTDP-D-glucose 4,6-dehydratase gi|55416766|gb|AAV50416.1| GDP mannose 4,6-dehydratase (hydroxysteorid dehydrogenase?) [Acanthamoeba polyphaga mimivirus] gi|308204683|gb|ADO18484.1| putative dTDP-D-glucose 4,6-dehydratase [Acanthamoeba polyphaga mimivirus] Length = 323 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 20/307 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS ++ + + + V D Y S++ + +N ++ DI + Sbjct: 4 ILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCA---SVENVEWNNRTKLIKGDIRN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I L E + D IV+FAA SHVD S + F TN+ GT +LLE +R++ Sbjct: 61 FDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLK--- 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F +STDEVYG +D S ++ P++PY+ATKA ++++V ++ +Y +P++ Sbjct: 118 -----LFFHMSTDEVYGEIDTTDTSREVSLLCPTNPYAATKAGAEHIVKSYFLSYKLPII 172 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ C+N YG +PEKLIP I +++G + + G G + R++++ D A+ LV+ G Sbjct: 173 IARCNNVYGRNQYPEKLIPKFICSLLDGKKLHIQGTGNSRRNFIHAIDVADAVDLVINNG 232 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IGE YNIG NE +D+ L D + + ++ DR +D RY I + K Sbjct: 233 VIGETYNIGVTNEHSVLDVA---QILCDI---AGVNLENQLEYVPDRLFNDFRYNITNDK 286 Query: 301 IKSEIGW 307 IKS +GW Sbjct: 287 IKS-LGW 292 >gi|312072782|ref|XP_003139222.1| hypothetical protein LOAG_03637 [Loa loa] gi|307765611|gb|EFO24845.1| hypothetical protein LOAG_03637 [Loa loa] Length = 268 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/266 (38%), Positives = 147/266 (55%), Gaps = 13/266 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYA-GNLNSLKEISQSNLFSFLQVDIC 60 ++VTGG GFIGS + + V IDKLTY N E+ QSN + F + + Sbjct: 8 VLVTGGCGFIGSNFINSVFQKWHMTRFVNIDKLTYGIRETNVAAEVRQSNRYKFFKGTVR 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L+++Q D IV+FAA +HVD S + I N++ T +LLE L ++ + Sbjct: 68 DIDLLLCLLRDYQIDTIVHFAAVTHVDESYIDRIGTIEENVMSTTVLLEAAALRYNGIK- 126 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY---NPSSPYSATKASSDYLVLAWGHTYGI 177 R L ISTDEVYG ++G + + Y NP++PYSA+KA + ++ A+ H+Y I Sbjct: 127 ------RLLHISTDEVYGESEEG-STPKVEYSLLNPTNPYSASKACCEMILKAYWHSYKI 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P ++ +N YGP KLIP I+ +EG L GDG + R W+YV+D A+ V Sbjct: 180 PFVMVRINNIYGPKQTLSKLIPKFISLAVEGKPYPLMGDGMHTRSWIYVDDCTDAIRRVC 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEI 263 + GRIGE YNIG E N D+ I Sbjct: 240 EIGRIGEIYNIGTEFEITNYDVTMLI 265 >gi|255073039|ref|XP_002500194.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas sp. RCC299] gi|226515456|gb|ACO61452.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas sp. RCC299] Length = 759 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 175/337 (51%), Gaps = 19/337 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG-NLNSLKEISQSNLFSFLQVDIC 60 ++I+TGG GFIG + + ++VIDKL+YA + L++ + D+ Sbjct: 401 KIIITGGCGFIGHHVVEHFAKTTDCNLVVIDKLSYASLGYDRLRDTGVLDRVQVFTTDLM 460 Query: 61 DR--ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 E I L + IV+ AAE+HVD SI FI N+ T LLE TR L Sbjct: 461 QPIPEGIAYELGN-NIEFIVHMAAETHVDNSIADPVPFIRNNVESTISLLEYTR----GL 515 Query: 119 SQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ D F STDEV+G +L +F E + P++PYS++K++++ + +A+ +TY I Sbjct: 516 IRNGCDLKAFFYFSTDEVFGPALGTTMFDEWDRHKPTNPYSSSKSAAENICIAYENTYKI 575 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL--YGDGQN--VRDWLYVEDHVRAL 233 P+++ N N +G PEK IP I ++++G V++ Y D + R +++ + A+ Sbjct: 576 PLMIVNVMNAFGERQHPEKFIPKCIKKVMDGEKVYIHSYPDKKTAGTRFYIHARNIAAAV 635 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L G IGE+YNI G +E N+ E+ + + K + E++ RPGHD R Sbjct: 636 MFLLNNGSIGEKYNITGESEVSNL----ELAQFISNTVGKELVY-EMVNHHATRPGHDLR 690 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 Y + K+ +++GW P E L + W + N+ W Sbjct: 691 YGLSGEKM-AKMGWVPPLGFEDSLRNCIRWTMANSHW 726 >gi|313768240|ref|YP_004061920.1| hypothetical protein MpV1_037 [Micromonas sp. RCC1109 virus MpV1] gi|312598936|gb|ADQ90960.1| hypothetical protein MpV1_037 [Micromonas sp. RCC1109 virus MpV1] Length = 313 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 174/310 (56%), Gaps = 22/310 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFI S + I + +DKL Y N++++ + + +F++ ++ + Sbjct: 5 VMVTGGCGFIASNFLNIMKKRYPNIHFVNVDKLDYCSNIDNV----EPGVATFIKGNVGN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +K+++ DA+ +FAA+SHVD S A F N T +L+E R + Sbjct: 61 AELTENLIKQYKFDAVFHFAAQSHVDNSFENALSFTMDNTHATHVLIEACRHYIP----- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPV 179 F+ STDEVYG + F+ED P++PYSA+KA+++ +V ++ ++G+ + Sbjct: 116 ---NVEFIHFSTDEVYGESKTDIPFTEDEGVLRPTNPYSASKAAAEMIVRSYIESFGMNI 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG-DGQNV-RDWLYVEDHVRALYLVL 237 + C+N YGP +PEKLIP + EG ++G + NV R +++VED V A+ V Sbjct: 173 KVIRCNNVYGPNQYPEKLIPKFKRLLKEGKKCTIHGKNSANVKRAFMHVEDVVNAVETVW 232 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K G++GE YNI ++E V E+ L+ + + + + I ++EDRP +D+RY I Sbjct: 233 KNGKMGEIYNIASDDELS----VMEVTKLIIETVLGTTDYDKWITYVEDRPFNDKRYYIC 288 Query: 298 SSKIKSEIGW 307 + K+K+ +GW Sbjct: 289 AKKLKA-LGW 297 >gi|281347399|gb|EFB22983.1| hypothetical protein PANDA_007189 [Ailuropoda melanoleuca] Length = 253 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/267 (35%), Positives = 151/267 (56%), Gaps = 19/267 (7%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DIC+ ++ + + D +++FAA++HVD S + A EF N+ GT +L+ Sbjct: 2 DICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVS-------- 53 Query: 118 LSQDKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + +F+ +STDEVY GSLDK F E P P++PY+++KA+++ V ++ Y Sbjct: 54 -AAHEAGVEKFIYVSTDEVYGGSLDKE-FDESSPKQPTNPYASSKAAAECFVQSYWERYK 111 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P +++ SN YGP+ +PEK+IP I+ + ++G G R++LY D V A V Sbjct: 112 FPAVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTV 171 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIEDRPGHDRR 293 LKKG+ GE YNIG N E V ++ L LI ++ S +E+ + ++ DRP +D R Sbjct: 172 LKKGKPGEIYNIGTNFEMS----VLQLAKELIQLIKETSSESEMENWVDYVNDRPTNDMR 227 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKT 320 Y + S KI +GW P+ + G+ KT Sbjct: 228 YPMKSEKIHG-LGWRPKVPWKEGIKKT 253 >gi|6933889|gb|AAF31493.1|AF071521_1 putative TDP-glucose dehydratase [Streptomyces noursei ATCC 11455] Length = 179 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 16/190 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-----DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL 55 MRL+VTGGAGFIGS R L++ IQV V+DKLTYAG +L + ++F+ Sbjct: 1 MRLLVTGGAGFIGSEFVRSLLSITDSSTHGIQVTVLDKLTYAGVAANLDPVVDHPGYTFV 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DICD + + DA+V+FAAESHVDRSI GA+ F+ TN++GT +LL+ Sbjct: 61 HGDICDARLVDQVMAGH--DAVVHFAAESHVDRSIAGAEPFVMTNVMGTQLLLD------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF+ +STDEVYGS+ G ++ED P P+SPY+A+KA SD L LA+ TY Sbjct: 113 ---AAVRHRIGRFVHVSTDEVYGSISTGSWTEDCPVEPNSPYAASKAGSDLLALAYHRTY 169 Query: 176 GIPVLLSNCS 185 G+ V+++ CS Sbjct: 170 GLDVVVTRCS 179 >gi|314055128|ref|YP_004063466.1| putative TDP-glucose 4,6-dehydratase [Ostreococcus tauri virus 2] gi|313575019|emb|CBI70032.1| putative TDP-glucose 4,6-dehydratase [Ostreococcus tauri virus 2] Length = 311 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 172/316 (54%), Gaps = 22/316 (6%) Query: 4 IVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGG GFIGS + I+ + IDKL Y N++++ S + F+Q ++C+ Sbjct: 5 LVTGGCGFIGSNFLNIIKERHPDIEFVNIDKLDYCSNIHNV----NSGVAKFIQHNLCNV 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +KE++ D + +FAA+SHVD S F N GT L+E R Sbjct: 61 GILENIVKEYKFDYVFHFAAQSHVDNSFTSPLGFTLDNTYGTHTLVEVCRRHIP------ 114 Query: 123 KDQFRFLQISTDEVYG-SLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ STDEVYG S F+ED P++PYSA+KA+++ +V ++ ++ + + Sbjct: 115 --NVEFIHFSTDEVYGESKTDEPFTEDTGVLRPTNPYSASKAAAEMIVRSYIESFDMNIK 172 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG-DGQNV-RDWLYVEDHVRALYLVLK 238 + C+N YGP +PEKLIP I + EG ++G + NV R +++V D V A+ +V K Sbjct: 173 IIRCNNVYGPNQYPEKLIPKFIRLLKEGKKCTIHGINSANVRRAFMHVHDVVDAVEVVWK 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ GE YNI ++E V ++ L+ + + + E I +EDRP +D+RY I + Sbjct: 233 SGKPGEVYNIASDDELS----VMDVTKLIIKTLKNTEEYDEWIECVEDRPFNDQRYYICA 288 Query: 299 SKIKSEIGWFPQENME 314 K+K E+GW + E Sbjct: 289 KKLK-ELGWSQKRTRE 303 >gi|309401862|gb|ADO79969.1| dTDP-glucose-4,6-dehydratase [Streptomyces hygroscopicus] Length = 167 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 81/164 (49%), Positives = 112/164 (68%), Gaps = 11/164 (6%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 QV+V+DKLTYAG+ +L E++ S F++ DICD E + L+ D +V+FAAESHV Sbjct: 10 QVVVVDKLTYAGSEANLAEVADSPRLRFVRGDICDGELVGELLR--GTDLVVHFAAESHV 67 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS 146 DRSI GA+EF+ TN++GT LL + + +F+ ISTDEVYGS++ G +S Sbjct: 68 DRSISGAEEFVRTNVLGTHTLLN---------AAANAEVGKFVHISTDEVYGSIESGSWS 118 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP 190 E+ P P+SPYSA+KASSD L A+ T+G+PV ++ CSNNYGP Sbjct: 119 EEEPLEPNSPYSASKASSDLLARAFHRTHGLPVCVTRCSNNYGP 162 >gi|320164690|gb|EFW41589.1| NAD dependent epimerase/dehydratase [Capsaspora owczarzaki ATCC 30864] Length = 440 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 165/297 (55%), Gaps = 23/297 (7%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F++ I + + ++ + D +++FAA+SHVD S + +F TN++GT L+E Sbjct: 145 FRFVRGSIENVQLLQQLFADEAFDTVLHFAAQSHVDLSFGNSLKFTQTNVLGTHALIECA 204 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLV 168 RL RF+ +STDEVYG+ G E +P +P++PY+ +KA+++ + Sbjct: 205 RL---------AGVKRFIHVSTDEVYGATAVGHAHAPEEQLP-DPTNPYACSKAAAELVA 254 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ +G+P++++ +N YGP FPEK++P I R++ G L+GDG +R +L+V+D Sbjct: 255 KSYMMCFGMPIIITRSNNVYGPGQFPEKVVPKFILRLLRGEKCCLHGDGSALRTYLHVDD 314 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 A +VL +G GE YN G ++E + ++ L I E I ++DR Sbjct: 315 VCAAFDVVLHRGHGGEIYNFGSDDELS----IRDLAKTLVRQIRPDCDCDEWIEQVDDRL 370 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY----LDNNW-WWRPLYKELKP 340 +DRRY+I S+K+ + +GW P+ +GL T+ WY L+N+ +W L+P Sbjct: 371 VNDRRYSISSAKLAA-LGWVPRVGFLAGLQSTIDWYRQHILENHEPYWSDFELALQP 426 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSL 43 R++VTGGAGFIGS +C +L+ + + +V+ +D L +L +L Sbjct: 11 RILVTGGAGFIGSHVCAFLLREYPQYRVVCLDSLEPCASLKNL 53 >gi|213613376|ref|ZP_03371202.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 141 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 70/118 (59%), Positives = 90/118 (76%) Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YG G +RDWLYVEDH RAL++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++P Sbjct: 3 IYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVP 62 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ S+ E I ++ DRPGHDRRYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 63 KATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 120 >gi|325145458|gb|EGC67733.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis M01-240013] Length = 149 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/139 (52%), Positives = 101/139 (72%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + + Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122 Query: 122 KKDQFRFLQISTDEVYGSL 140 + + FRF ISTDEVYG L Sbjct: 123 QHEAFRFHHISTDEVYGDL 141 >gi|284799481|ref|ZP_06390166.1| dTDP-glucose 4,6-dehydratase [Neisseria subflava NJ9703] gi|284797989|gb|EFC53336.1| dTDP-glucose 4,6-dehydratase [Neisseria subflava NJ9703] Length = 152 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 72/135 (53%), Positives = 98/135 (72%), Gaps = 4/135 (2%) Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF 261 I ++G + +YGDG +RDWL+VEDH RALY V+ +G +GE YNIGG+NE+ NI++V Sbjct: 2 ILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVK 61 Query: 262 EIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 I LL+ L+P+ + + +LI F++DRPGHD RYAID++KI E+GW PQE ESG+ Sbjct: 62 TICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVRYAIDAAKIGRELGWKPQETFESGI 121 Query: 318 NKTVCWYLDNNWWWR 332 KTV WYLDN WW+ Sbjct: 122 RKTVQWYLDNKTWWQ 136 >gi|282163443|ref|YP_003355828.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282155757|dbj|BAI60845.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 321 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 171/342 (50%), Gaps = 31/342 (9%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M +++TGGAGF+GS LC +Y +N K V+ +D G+L +++ + F + DI Sbjct: 1 MNILITGGAGFVGSHLCDKYTLNGDK--VICLDNFM-NGSLTNIRHLIGHRNFKLINGDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +++ D + + AA+ HVDRS++ N+IGT +LE R++ Sbjct: 58 RNFDLLEKIMRDV--DVVFHLAAQIHVDRSVVEPKLTYDINVIGTQNVLEAARMY----- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + + ST EVYGS ED P N PY A+K ++D L ++ +TYG+ + Sbjct: 111 ----DVQKVIHASTSEVYGSTQYAPMDEDHPLNAPHPYGASKIAADRLCFSYINTYGMNI 166 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP I + R++ ++GDG+ RD+ YVED V A L+ Sbjct: 167 CIMRPFNLYGPRQKDTGYGGAISIFTKRVLNNMPPIIFGDGEQTRDYTYVEDIVEAYDLI 226 Query: 237 L-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDRR 293 L +GR+G+ N G NE K +D L LI K I+ +E RPG R Sbjct: 227 LHHEGRMGQPMNFGTGNEIKILD--------LARLIIKMCGKEGQIKPVCVEPRPGEVVR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW--WWRP 333 D S+ KS +GW P ++E GL K + WY + W +P Sbjct: 279 LIADISRAKSVLGWKPHYSIEMGLGKYLDWYANYKCEEWSKP 320 >gi|159884661|emb|CAJ43276.1| hypothetical protein [Ascaris suum] Length = 632 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 161/330 (48%), Gaps = 15/330 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDI 59 R +VTGG GFIGS Y+ + + + DKL + + +E+ S + + DI Sbjct: 6 RALVTGGCGFIGSNFINYIFHVWPDVHFVNCDKLILNSDACYVDEEVRSSERYQLVTADI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E +R L E + D +V+FAA+ R E + N+I LL+ R + + Sbjct: 66 RNSEVVRRILNENKIDTVVHFAADCTSTRCYGDPIESVENNVIAFIKLLDAVREYGAVK- 124 Query: 120 QDKKDQFRFLQISTDEVYG----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ISTDEVYG S DK ED P +PY+ATKA+ + + + Sbjct: 125 -------RFIHISTDEVYGDSDLSEDKKGKLEDSLLLPGNPYAATKAACESYAHMYRQQF 177 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP+++ +N YGP + K++P I + + G G+ +R WLY +D + Sbjct: 178 GIPIVILRINNIYGPNQWDVKVVPRFIGIAKNRENFTIQGSGKQLRSWLYADDASEGIRA 237 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++G +GE YN+G E +D+ E+ +D + + S + I DRP +D RY Sbjct: 238 AVERGAVGEIYNLGTYFELNMLDVAREVQVEVDKQLGREPSPVHFVS-IPDRPYNDLRYL 296 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID +K E+GW P+ G+ + V L Sbjct: 297 IDITKAYDELGWSPKIPFNEGIRRVVASAL 326 >gi|324506961|gb|ADY42959.1| Rhamnose biosynthetic enzyme 1 [Ascaris suum] Length = 632 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/331 (30%), Positives = 161/331 (48%), Gaps = 17/331 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDI 59 R +VTGG GFIGS Y+ + + + DKL + + +E+ S + + DI Sbjct: 6 RALVTGGCGFIGSNFINYIFHVWPDVHFVNCDKLILNSDACYVDEEVRSSERYQLVTADI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E +R L E + D +V+FAA+ R E + N+I LL+ R + + Sbjct: 66 RNSEVVRRILNENKIDTVVHFAADCTSTRCYGDPIESVENNVIAFIKLLDAVREYGAVK- 124 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 RF+ ISTDEVYG D KG ED P +PY+ATKA+ + + Sbjct: 125 -------RFIHISTDEVYGDSDLSEDEKGKL-EDSLLLPGNPYAATKAACESYAHMYRQQ 176 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +GIP+++ +N YGP + K++P I + + G G+ +R WLY +D + Sbjct: 177 FGIPIVILRINNIYGPNQWDVKVVPRFIEIAKNRENFTIQGSGKQLRSWLYADDASEGIR 236 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++G +GE YN+G E +D+ E+ +D + + S + I DRP +D RY Sbjct: 237 AAVERGAVGEIYNLGTYFELNMLDVAREVQVEVDKQLGREPSPVHFVS-IPDRPYNDLRY 295 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ID +K E+GW P+ G+ + V L Sbjct: 296 LIDITKAYDELGWSPKIPFNEGIRRVVASAL 326 >gi|164429070|ref|XP_957289.2| hypothetical protein NCU00403 [Neurospora crassa OR74A] gi|157072397|gb|EAA28053.2| hypothetical protein NCU00403 [Neurospora crassa OR74A] Length = 307 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 133/244 (54%), Gaps = 11/244 (4%) Query: 22 NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFA 81 N V+ DKL Y +LN+ + + FSF + DI + + L+ + D I +FA Sbjct: 13 NSEAYNVVSFDKLDYCASLNNTRVLEHEPNFSFYRGDITNPSEVMDCLERYNIDTIFHFA 72 Query: 82 AESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL- 140 A+SHVD S F TN+ GT +LLE R K RF+ +STDEVYG + Sbjct: 73 AQSHVDLSFGNPFGFTHTNVYGTHVLLESAR---------KAGIKRFIHVSTDEVYGEVK 123 Query: 141 -DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIP 199 D+ E P++PY+A+KA+++ LV ++ ++ +P+++ +N YGP+ +PEK+IP Sbjct: 124 DDEDDLLETSILAPTNPYAASKAAAEMLVNSYKKSFKLPIIIVRSNNVYGPHQYPEKIIP 183 Query: 200 LAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDI 259 + G V L+GDG R +L+ D A +L +G++GE YN+G +E N+ + Sbjct: 184 KFTCLLARGEPVVLHGDGSPTRRYLFAGDAADAFDTILHRGQLGEIYNVGSYDEISNLSL 243 Query: 260 VFEI 263 ++ Sbjct: 244 CHKL 247 >gi|170590272|ref|XP_001899896.1| NAD dependent epimerase/dehydratase family protein [Brugia malayi] gi|158592528|gb|EDP31126.1| NAD dependent epimerase/dehydratase family protein [Brugia malayi] Length = 635 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 103/332 (31%), Positives = 167/332 (50%), Gaps = 19/332 (5%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 ++VTGG GFIGS Y+ + ++ IDKLT ++ + +E+ +S+ + + DI Sbjct: 9 VLVTGGCGFIGSNFVNYIFRTWPQTNIVNIDKLTLNADVFYVNEEVIESSRYKLITADIR 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L E + D +++FA + R E I N+I FI + C+ Sbjct: 69 NCALVERILNENKIDTVIHFATDCTSTRCYDDPVESIENNVIA-FIQ------FMKCIQS 121 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS------EDMPYNPSSPYSATKASSDYLVLAWGHT 174 KK + RFL ISTDEVYG D L + ED P +PY+ATKA+ + Sbjct: 122 YKKIE-RFLHISTDEVYG--DSNLVADEKGKIEDAVLLPGNPYAATKAACESYAHICCDL 178 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P+++ +N YGP + K+IP I + G G+ +R WLYV+D + Sbjct: 179 FAMPIIILRINNIYGPNQWDVKVIPRFIKLAKNMEKFTVQGSGKQLRSWLYVDDAAEGIR 238 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++ G+I E YNIG E ID+ I +D + +S + E + + DRP +D RY Sbjct: 239 KAVESGKIHEIYNIGTYFEMNVIDLAHVIQAEVDRQLGRSLTPVEFVGIL-DRPYNDLRY 297 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +D SKI + GW P+ + E G+++ + L+ Sbjct: 298 LLDYSKISLDTGWSPKVSFEEGISRVIVSALN 329 >gi|41054187|ref|NP_956111.1| dTDP-D-glucose 4,6-dehydratase [Danio rerio] gi|29436945|gb|AAH49462.1| TDP-glucose 4,6-dehydratase [Danio rerio] Length = 274 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 10/268 (3%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS L L +++ +D L Y NL +L+ + S+ +SF+ D+CD Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ D + + AAE+HV+ S + F+ N+ GT +L+ Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRAAL--------- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + RF+ ISTDEVYG F E P P++PYS +KA+++ +V ++ + P ++ Sbjct: 120 EASVQRFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVI 179 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + SN YGP EK+IP ++ + + + G G R +LYV D A V++KG Sbjct: 180 TRSSNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGI 239 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDA 269 +GE YNIG E I + E+ ++ A Sbjct: 240 LGEIYNIGTGFEIPIIQLARELVQMVRA 267 >gi|184201351|ref|YP_001855558.1| putative dTDP-glucose 4,6-dehydratase [Kocuria rhizophila DC2201] gi|183581581|dbj|BAG30052.1| putative dTDP-glucose 4,6-dehydratase [Kocuria rhizophila DC2201] Length = 237 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 113/192 (58%), Gaps = 16/192 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L+V GGAGFIG+ +++ + + V V+DKLTYAGN +L + S + I D Sbjct: 4 LLVAGGAGFIGANFVHHVLENTEHSVTVLDKLTYAGNPENLA-AADSARCELVVGGIADA 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + DA+V+FAAESH D S+ F+ TN++GT+ LLE R Sbjct: 63 GVVDDLMGAA--DAVVHFAAESHSDNSLRDPWPFVQTNVVGTYTLLEAAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F +STDEV+G L D F+ED Y PSSPYSATKA+SD+LV AW ++G+ V Sbjct: 111 RHGTGFHHVSTDEVFGDLALEDPQHFTEDTAYRPSSPYSATKAASDHLVRAWARSFGVEV 170 Query: 180 LLSNCSNNYGPY 191 LSN SNNYGPY Sbjct: 171 TLSNRSNNYGPY 182 >gi|313844017|ref|YP_004061680.1| hypothetical protein OlV1_047 [Ostreococcus lucimarinus virus OlV1] gi|312599402|gb|ADQ91424.1| hypothetical protein OlV1_047 [Ostreococcus lucimarinus virus OlV1] Length = 311 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/320 (32%), Positives = 171/320 (53%), Gaps = 22/320 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGG GFIGS + + I + IDK+ Y N++++ + + +Q ++C Sbjct: 5 LVTGGCGFIGSNFLNIMKSRYPDINFINIDKVDYCSNIHNV----NPGVATLVQRNLCSA 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +KE + D + +FAA+SHVD S + F N GT L+E R Sbjct: 61 GFVENLIKEHKFDYVFHFAAQSHVDNSFISPLGFTLDNTYGTHTLVEMCRRHIP------ 114 Query: 123 KDQFRFLQISTDEVYG-SLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ STDEVYG S F+ED P++PYSA+KA+++ +V+++ ++ + + Sbjct: 115 --NVEFIHFSTDEVYGESKTDEPFTEDTGVLRPTNPYSASKAAAEMIVMSYIESFNMNIK 172 Query: 181 LSNCSNNYGPYHFPEKLIP--LAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + C+N YGP +PEKLIP + R E + R +++V+D V A+ +V K Sbjct: 173 ILRCNNVYGPNQYPEKLIPKFKRLLRNNEKCTIHGVNSASVRRAFMHVDDVVDAVEVVWK 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G+ GE YNI ++E V ++ L+ I + + E I +IEDRP +D+RY I + Sbjct: 233 RGKTGEVYNIASDDELS----VMDVTRLIIKTIKDTEDYDEWIEYIEDRPFNDQRYHICA 288 Query: 299 SKIKSEIGWFPQENMESGLN 318 K+K E+GW ++ E LN Sbjct: 289 KKLK-ELGWSQKKTHEDLLN 307 >gi|219559532|ref|ZP_03538608.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T17] gi|289571697|ref|ZP_06451924.1| predicted protein [Mycobacterium tuberculosis T17] gi|289545451|gb|EFD49099.1| predicted protein [Mycobacterium tuberculosis T17] Length = 176 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/169 (45%), Positives = 100/169 (59%), Gaps = 8/169 (4%) Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV AW +YG+ +SNCSNNYGPY EK IP IT ++ G LYG G NVRDW++V Sbjct: 2 LVRAWVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHV 61 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +DH A+ +L +GRIG Y I ER N+ ++ + L+D P + H + D Sbjct: 62 DDHNSAVRRILDRGRIGRTYLISSEGERDNLTVLRTLLRLMDR-DPDDFDH------VTD 114 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPL 334 R GHD RYAID S + E+ W P+ + E GL T+ WY DN WWRPL Sbjct: 115 RVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPL 163 >gi|187469770|gb|AAI66991.1| Tgds protein [Rattus norvegicus] Length = 227 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/218 (39%), Positives = 127/218 (58%), Gaps = 10/218 (4%) Query: 127 RFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y PV+++ S Sbjct: 8 KFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 66 Query: 186 NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER 245 N YGP+ +PEK+IP I+ + ++G G R++LY D V A VL KG GE Sbjct: 67 NVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEI 126 Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR---FIEDRPGHDRRYAIDSSKIK 302 YNIG N E + + E L LI ++ S +E R ++ DRP +D RY + S KI Sbjct: 127 YNIGTNFEMSVVQLAKE----LIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIH 182 Query: 303 SEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 S +GW P+ E G+ KTV WY +N W+ K L+P Sbjct: 183 S-LGWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEP 219 >gi|296160325|ref|ZP_06843143.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] gi|295889536|gb|EFG69336.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] Length = 144 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/138 (50%), Positives = 94/138 (68%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ +N VL +DKLTYAGNL +LK + F++ DICDR Sbjct: 2 ILVTGGAGFIGANFVLDWLNASDEAVLNVDKLTYAGNLGTLKSQQGNPKHVFVRADICDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L + Sbjct: 62 SALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALGEAG 121 Query: 123 KDQFRFLQISTDEVYGSL 140 K FRFL +STDEV+GSL Sbjct: 122 KAAFRFLHVSTDEVFGSL 139 >gi|238493487|ref|XP_002377980.1| NAD dependent epimerase/dehydratase, putative [Aspergillus flavus NRRL3357] gi|220696474|gb|EED52816.1| NAD dependent epimerase/dehydratase, putative [Aspergillus flavus NRRL3357] Length = 222 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 120/198 (60%), Gaps = 13/198 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG R+L+ + V D L Y ++N K +SQ + F F++ ++C Sbjct: 29 ILVTGGAGFIGGWFVRHLLQTYGDRYAVTCFDNLDYCASVNKFKAVSQLSNFHFVRGNVC 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +AL+ + D+IV+FAA SHVD S+ G+ F N+IGT +LLE R S Sbjct: 89 TPKDVENALRNYHIDSIVHFAARSHVDTSLNGSLSFTQINVIGTQVLLEVAREQGSIR-- 146 Query: 121 DKKDQFRFLQISTDEVYGSLDK---GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ +STDEVYG D F+E+ +P++PYSA+KA+++ ++ A+ ++ I Sbjct: 147 ------RFIHVSTDEVYGENDAQNPTAFTEEQSLHPTNPYSASKAATEMIIQAYRKSFHI 200 Query: 178 PVLLSNCSNNYGPYHFPE 195 P+++ C+N +GP +PE Sbjct: 201 PLIIVRCNNVFGPRQYPE 218 >gi|296163466|ref|ZP_06846216.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] gi|295886298|gb|EFG66166.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] Length = 144 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 69/141 (48%), Positives = 99/141 (70%), Gaps = 6/141 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ ++++ L++ ++ +DKLTYAGNL +LK L F++ DI Sbjct: 2 ILVTGGAGFIGA---NFVLDWLRLHDEPLVNVDKLTYAGNLGTLKSRQHDPLHIFVRADI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CDR + + E +P A+++FAAESHVDRSI G +F+ TN++GTF LLE TR +W+ L Sbjct: 59 CDRSALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNALG 118 Query: 120 QDKKDQFRFLQISTDEVYGSL 140 + K FRFL +STDEV+GSL Sbjct: 119 EAGKAAFRFLHVSTDEVFGSL 139 >gi|332756886|gb|EGJ87231.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2747-71] gi|333017149|gb|EGK36470.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-304] Length = 190 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 65/129 (50%), Positives = 92/129 (71%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R+++N+ + V+ +DKLTYAGNL SL ++S S ++F DIC Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + QPDA+++ AAESHVDRSI G FI TNI+GT++LLE R +WS L+ Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND 120 Query: 121 DKKDQFRFL 129 +KK F+ Sbjct: 121 EKKKVSAFI 129 >gi|83775034|dbj|BAE65157.1| unnamed protein product [Aspergillus oryzae] Length = 211 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 120/198 (60%), Gaps = 13/198 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG R+L+ + V D L Y ++N K +SQ + F F++ ++C Sbjct: 18 VLVTGGAGFIGGWFVRHLLQTYGDRYAVTCFDNLDYCASVNKFKAVSQLSNFHFVRGNVC 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +AL+ + D+IV+FAA SHVD S+ + F TN+IGT +LLE R S Sbjct: 78 TPKDVENALRNYHIDSIVHFAARSHVDTSLNDSLSFTQTNVIGTQVLLEVAREQGSIR-- 135 Query: 121 DKKDQFRFLQISTDEVYGSLDK---GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ +STDEVYG D F+E+ +P++PYSA+KA+++ ++ A+ ++ I Sbjct: 136 ------RFIHVSTDEVYGENDAQNPTAFTEEQSLHPTNPYSASKAATEMIIQAYRKSFHI 189 Query: 178 PVLLSNCSNNYGPYHFPE 195 P+++ C+N +GP +PE Sbjct: 190 PLIIVRCNNVFGPRQYPE 207 >gi|308476171|ref|XP_003100302.1| hypothetical protein CRE_22549 [Caenorhabditis remanei] gi|308265044|gb|EFP08997.1| hypothetical protein CRE_22549 [Caenorhabditis remanei] Length = 661 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 15/329 (4%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKE-ISQSNLFSFLQVDIC 60 +++TGG GFIGS Y+ + V IDKL + ++ E + QS + + DI Sbjct: 40 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVNESVRQSPRYKLVLTDIK 99 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + +E + D +++FAA+ R E + N++ L+ R + Sbjct: 100 NEAAILNVFEENEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLDTVRKYGRIQ-- 157 Query: 121 DKKDQFRFLQISTDEVYG----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+ ISTDEVYG S D+ E P +PY+ATK + + V A+ Y Sbjct: 158 ------RFVHISTDEVYGDSDLSADEQGKVEHSRLLPGNPYAATKIAGEAYVRAYQRQYN 211 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P++ + +N YGP + K++P I + G G+ +R WL+V+D L V Sbjct: 212 LPIVTARMNNIYGPNQWDVKVVPRFIEIAKARGEYTIQGTGKQLRSWLFVDDASAGLKAV 271 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GR+ E YN+G E+ D+ I +D + +++ + I DRP +D RY I Sbjct: 272 TENGRLQEIYNLGTYYEKNVADLAKTIQEEVDRQLGRAHEPPRY-KSIPDRPYNDLRYFI 330 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 K ++E+GW P + + G+ TV L Sbjct: 331 SIEKAQNELGWTPSTSFDDGMRITVASAL 359 >gi|330945655|gb|EGH47136.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 157 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 68/131 (51%), Positives = 85/131 (64%), Gaps = 13/131 (9%) Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YGDGQ +RDWLYVEDH + VL+ G +GE YNIGG NE+ NIDIV + LLD L P Sbjct: 5 VYGDGQQIRDWLYVEDHCSGIRRVLEAGALGETYNIGGWNEKANIDIVQTLCALLDELAP 64 Query: 273 KSY-------------SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + ++ ELI ++ DRPGHDRRYAID+ KI+ E+GW P E E+G+ K Sbjct: 65 AAARQVINQKTGQPVSAYAELITYVTDRPGHDRRYAIDARKIERELGWKPAETFETGIRK 124 Query: 320 TVCWYLDNNWW 330 TV WYL N W Sbjct: 125 TVEWYLANQKW 135 >gi|290343515|ref|YP_003494882.1| hypothetical protein OTV1_042 [Ostreococcus tauri virus 1] gi|260160930|emb|CAY39630.1| hypothetical protein OTV1_042 [Ostreococcus tauri virus 1] Length = 311 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 171/318 (53%), Gaps = 22/318 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +VTGG GFIGS + I + IDK+ Y N++++K + + ++ D+C Sbjct: 3 KALVTGGCGFIGSNFLNIMKERHPDIDFINIDKVDYCSNVHNVK----PGVATLVRRDLC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE + D + +FAA+SHVD S + F N GT L+E + + Sbjct: 59 NVGFLENLVKEHKFDYVFHFAAQSHVDNSFISPLGFTLDNTYGTHALVE--------MCR 110 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 F+ STDEVYG D+ E P++PYSA+KA+++ ++ ++ ++ + Sbjct: 111 RHTPNVEFIHFSTDEVYGESKTDEPFTEETGVLRPTNPYSASKAAAEMIIRSYIESFDMN 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG-DGQNV-RDWLYVEDHVRALYLV 236 + + C+N YGP +PEKLIP I + ++G + NV R +++VED V A+ +V Sbjct: 171 IKIIRCNNVYGPNQYPEKLIPKFIRLLKNNEKCTIHGTNSANVRRAFMHVEDVVDAVEVV 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K+G GE YNI ++E V ++ L+ + + + E I +IEDRP +D+RY I Sbjct: 231 WKRGVRGEVYNIASDDELS----VMDVTKLIIKTLKNTEDYDEWIDYIEDRPFNDQRYYI 286 Query: 297 DSSKIKSEIGWFPQENME 314 + K+K+ +GW + E Sbjct: 287 CAKKLKA-LGWSQKRTRE 303 >gi|145294452|ref|YP_001137273.1| hypothetical protein cgR_0407 [Corynebacterium glutamicum R] gi|140844372|dbj|BAF53371.1| hypothetical protein [Corynebacterium glutamicum R] Length = 311 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 160/327 (48%), Gaps = 22/327 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+ + +V+VID L+ G L +L + + +F++ D+ Sbjct: 1 MRTVVTGGAGFIGSHLVDLLIKEGH-EVVVIDNLSR-GRLENLSDAETTGKLTFVEADLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E +P+ I + AA+ V S++ TNI+ T + + R Q Sbjct: 59 DVD-FNEFLGEHKPEVIFHLAAQIDVRHSVVDPLHDAETNILSTIRIADAAR-------Q 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F S +YG + +E +P +P SPY+A+K S + + + H YG+ Sbjct: 111 HGVRKVVFTS-SGGSIYGEPSEFPVAETVPVDPHSPYAASKVSGEIYLNTFRHLYGLDCS 169 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P ++ + R++ G ++GDG N RD++YV D VRA YL Sbjct: 170 HIAPANVYGPRQDPHGEAGVVAIFALRLLGGLDTKVFGDGGNTRDYVYVGDVVRAFYLAS 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GER+NIG + E + L L+ + + + R G R A+ Sbjct: 230 GEIGGGERFNIGTSVETSDRQ--------LHTLVATAAGSKDDPEYAPARLGDVPRSALS 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 K K +GW P+ N+E G+ KTV ++ Sbjct: 282 FGKAKEVLGWEPEVNIEQGVAKTVEYF 308 >gi|110597142|ref|ZP_01385431.1| NAD-dependent epimerase/dehydratase [Chlorobium ferrooxidans DSM 13031] gi|110341333|gb|EAT59798.1| NAD-dependent epimerase/dehydratase [Chlorobium ferrooxidans DSM 13031] Length = 328 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/278 (31%), Positives = 146/278 (52%), Gaps = 18/278 (6%) Query: 52 FSFLQVDICDR-ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 FSF Q+D+ + I L+E +P +VNFAA+S V S ++ TN + T +E Sbjct: 52 FSFYQLDLNRHLDEITRLLRERRPAYVVNFAAQSMVGESWQNPGDWFMTNTVSTVKFHDE 111 Query: 111 TRLWWSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 R K D R ++ +ST EVYGS G SED P+NP++PY+ ++A++D + Sbjct: 112 LR---------KVDFLRRYVHVSTPEVYGSC-SGFVSEDFPFNPTTPYAVSRAAADMSLR 161 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + YG PV+ + +N YGP ++IP I ++ G + L+G G + R ++Y++D Sbjct: 162 TFRAVYGFPVVTTRAANVYGPGQQLYRIIPRTILCILLGRKLQLHGGGVSTRSFIYMDDV 221 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A + +++ GR G+ Y+I + + I I + L L K H E + +R G Sbjct: 222 CDATWRIMQNGRDGQTYHISTD---EVISIRELVELLCRKLDVKFEDHVEC---VGERLG 275 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D Y +DSS+++ E+GW ++ G++ + W N Sbjct: 276 KDSAYHLDSSRVRRELGWQDHTRLDQGIDACIAWVRKN 313 >gi|163955016|ref|YP_001648120.1| hypothetical protein OsV5_043f [Ostreococcus virus OsV5] gi|163638465|gb|ABY27824.1| hypothetical protein OsV5_043f [Ostreococcus virus OsV5] Length = 311 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 171/318 (53%), Gaps = 22/318 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +VTGG GFIGS + I + IDK+ Y N++++K + + ++ D+C Sbjct: 3 KALVTGGCGFIGSNFLNIMKERHPDIDFINIDKVDYCSNVHNVK----PGVATLVRRDLC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE + D + +FAA+SHVD S + F N GT L+E + + Sbjct: 59 NVGFLENLVKEHKFDYVFHFAAQSHVDNSFISPLGFTLDNTYGTHALVE--------MCR 110 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 F+ STDEVYG D+ E P++PYSA+KA+++ ++ ++ ++ + Sbjct: 111 RHTPNVEFIHFSTDEVYGESKTDEPFTEETGVLRPTNPYSASKAAAEMIIRSYIESFDMN 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG-DGQNV-RDWLYVEDHVRALYLV 236 + + C+N YGP +PEKLIP I + ++G + NV R +++VED V A+ +V Sbjct: 171 IKIIRCNNVYGPNQYPEKLIPKFIRLLKNNEKCTIHGTNSANVRRAFMHVEDVVDAVEVV 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K+G GE YNI ++E V ++ L+ + + + E I +IEDRP +D+RY I Sbjct: 231 WKRGIRGEVYNIASDDELS----VMDVTKLIIKTLKNTEDYDEWIDYIEDRPFNDQRYYI 286 Query: 297 DSSKIKSEIGWFPQENME 314 + K+K+ +GW + E Sbjct: 287 CAKKLKA-LGWSQKRTRE 303 >gi|1568529|emb|CAA66448.1| dNDP-glucose dehydratase [Streptomyces ghanaensis ATCC 14672] Length = 164 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 11/160 (6%) Query: 26 IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESH 85 + + V+DKLTYAGN +L E+ F+F+Q DICD E + + E D +V+FAAESH Sbjct: 16 VAITVLDKLTYAGNPANLDEVRAHPGFAFVQGDICDPELVGKLMAEH--DQVVHFAAESH 73 Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF 145 VDRSI G EF+ TN++GT L++ + F+ ISTDEVYGS+D+G + Sbjct: 74 VDRSIDGGAEFVRTNVVGTHTLIDAAH---------RAGIETFVHISTDEVYGSIDEGSW 124 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 E P P+SPYS+ KASSD + L++ T+G+ V ++ CS Sbjct: 125 PETHPLQPNSPYSSAKASSDLIALSYHRTHGLDVRVTRCS 164 >gi|261868355|ref|YP_003256277.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413687|gb|ACX83058.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 140 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 4/130 (3%) Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF 261 I+ + G + +YG+ Q +RDWLYVEDHVRALYLVL KG +GE YNI + E+ N+ ++ Sbjct: 2 ISNALNGKPLPVYGNRQQIRDWLYVEDHVRALYLVLMKGNVGESYNISSHCEKTNLAVIC 61 Query: 262 EIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 I LL+ L P + +LI + DRPGHDRRYA+D++KI+ E+ W PQEN SG+ Sbjct: 62 AICELLEELAPNKPMGVKYYADLIVHVTDRPGHDRRYALDATKIQQELSWQPQENFFSGI 121 Query: 318 NKTVCWYLDN 327 KTV WY+DN Sbjct: 122 RKTVQWYIDN 131 >gi|149050198|gb|EDM02522.1| TDP-glucose 4,6-dehydratase (predicted), isoform CRA_b [Rattus norvegicus] Length = 239 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 125/207 (60%), Gaps = 18/207 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ E R+ Sbjct: 79 DSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVE--- 135 Query: 118 LSQDKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y Sbjct: 136 ---------KFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYK 185 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAIT 203 PV+++ SN YGP+ +PEK+IP I+ Sbjct: 186 FPVVITRSSNVYGPHQYPEKVIPKFIS 212 >gi|10802665|gb|AAG23555.1|AF244606_1 dTDP-glucose 4,6-dehydratase [Carboxydothermus hydrogenoformans] Length = 161 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/147 (48%), Positives = 100/147 (68%), Gaps = 9/147 (6%) Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 PYS KA++D L A+ TYG +++ NNYGP+ +PEKLIP+ I + + + +YG Sbjct: 5 PYS--KAAADMLARAYHRTYGFRXIVARPCNNYGPWQYPEKLIPVVIKKALNNEPIPVYG 62 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 G NVR+WLYV+D + A+YL+L+KG+ GE YNIG E+ NI++V EI +L P+S Sbjct: 63 QGLNVREWLYVDDCIEAVYLLLQKGKPGEAYNIGSGEEKGNIEVVKEILRILGK--PES- 119 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIK 302 LI F+EDRPGHD RY+++S KIK Sbjct: 120 ----LITFVEDRPGHDFRYSLNSKKIK 142 >gi|115532424|ref|NP_001040727.1| hypothetical protein C01F1.3 [Caenorhabditis elegans] gi|1330395|gb|AAB00715.1| Hypothetical protein C01F1.3a [Caenorhabditis elegans] Length = 631 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 29/336 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKE-ISQSNLFSFLQVDIC 60 +++TGG GFIGS Y+ + V IDKL + ++ E + S + + DI Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + ++ + D +++FAA+ R E + N++ LE R + Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIK-- 125 Query: 121 DKKDQFRFLQISTDEVYGSLD-------KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 RF+ ISTDEVYG D K FS +P NP Y+ATK + + V A+ Sbjct: 126 ------RFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNP---YAATKIAGEAYVRAYQT 176 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV----FLYGDGQNVRDWLYVEDH 229 Y +P++ + +N YGP + K++P R IE + V + G G+ +R WL+V+D Sbjct: 177 QYNLPIVTARMNNIYGPNQWDVKVVP----RFIEIAKVRGEYTIQGSGKQLRSWLFVDDA 232 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L V +KG + E YN+G E+ D+ I +D + +++ + + I DRP Sbjct: 233 SAGLKAVCEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKY-KSIPDRPY 291 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +D RY I K K+++GW P + + G+ TV L Sbjct: 292 NDLRYLISIEKAKNDLGWEPTTSFDDGMRHTVASAL 327 >gi|302669885|ref|YP_003829845.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] gi|302394358|gb|ADL33263.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] Length = 375 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 44/363 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVID------------------------KLTY 36 R+IVTG AGFIGS LC L+ IQ+L ID K+ Sbjct: 12 RVIVTGAAGFIGSNLCMELIKRYSDIQILGIDNVNDYYDVGIKKDRLKRIAEILGDKVGT 71 Query: 37 AGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF 96 AG + I S F F++ +I DR I A EF+P+ +VN AA++ V SI D + Sbjct: 72 AGEYGVSETIGDSR-FVFIKGNIADRAVIDKAFDEFKPEVVVNLAAQAGVRYSIENPDAY 130 Query: 97 ITTNIIGTFILLEETRLWWSC--LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNP 153 I N+IG + +LE R + S D K + S+ VYGS K +S +D NP Sbjct: 131 IEANLIGFYNILEACRHSYDSQKASDDYKGVEHLVYASSSSVYGSNKKIPYSTDDKVDNP 190 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 S Y+ATK S++ L A+ YGIP YGP P+ ++++G + + Sbjct: 191 VSLYAATKKSNELLAHAYTKLYGIPSTGLRFFTVYGPAGRPDMAYFGFTNKLVKGETIKI 250 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKK-------GRIGERYNIGGNNERKNIDIV--FEIG 264 + G RD+ YV+D V + V++K G + YNIG N+ +D V + Sbjct: 251 FNFGNCKRDFTYVDDIVEGVINVMEKAPDENENGVRYKVYNIGNNDPVNLLDFVDILQQE 310 Query: 265 FLLDALIPKSY---SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + ++PK Y +H EL+ +PG D + ++ + G+ P + GL K Sbjct: 311 LISAGVLPKDYDFEAHKELVPM---QPGDVEVTYADVTPLQQDFGFKPNTPLREGLRKFA 367 Query: 322 CWY 324 WY Sbjct: 368 KWY 370 >gi|325143288|gb|EGC65624.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] gi|325143320|gb|EGC65654.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] gi|325143352|gb|EGC65685.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] Length = 133 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/125 (50%), Positives = 90/125 (72%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KDQFR 127 + FR Sbjct: 129 HEAFR 133 >gi|15081769|gb|AAK82539.1| At1g53500/F22G10_13 [Arabidopsis thaliana] gi|25090317|gb|AAN72275.1| At1g53500/F22G10_13 [Arabidopsis thaliana] Length = 498 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 7/174 (4%) Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV+A+G +YG+PV+ + +N YGP FPEK+IP I + G + ++GDG +VR +LY Sbjct: 2 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSSVRSYLYC 61 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 ED A +VL KG IG YN+G ER+ ID+ +I L P+S I+F+E+ Sbjct: 62 EDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLF-GKDPESS-----IQFVEN 115 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 RP +D+RY +D K+K ++GW + N E GL KT+ WY N WW + L P Sbjct: 116 RPFNDQRYFLDDQKLK-KLGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLP 168 >gi|320593515|gb|EFX05924.1| putative rhamnose biosynthesis enzyme 2 [Grosmannia clavigera kw1407] Length = 341 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 134/266 (50%), Gaps = 14/266 (5%) Query: 68 ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQF- 126 AL + D I++FAA SHV S F N+IGT LLE R K+ + Sbjct: 59 ALSDHNIDCILHFAACSHVQNSFNDQHSFTLNNVIGTHNLLECVR---------KRGRIT 109 Query: 127 RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 RF+ +STDEVYG E + P++PYSA+KA+++ V A+ ++GIPV++ +N Sbjct: 110 RFIHVSTDEVYGETPDESVDESKQFLPTNPYSASKAAAEMYVYAYFKSFGIPVVIVRSNN 169 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 +GP +PEK+IP + + + + G G + R +LY D +L +G GE Y Sbjct: 170 VFGPCQYPEKIIPRFFALLSKDQPLTIQGSGLHRRRYLYGSDAADGFDTILHRGVDGEAY 229 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIG 306 NI N+++ + L ++ + ++ DRP +D Y +D SK+ + +G Sbjct: 230 NIESGVGVTNLEVAIRMLQLFGYDSESDFA--TRLAWVADRPFNDHDYRVDGSKL-ANLG 286 Query: 307 WFPQENMESGLNKTVCWYLDN-NWWW 331 W E GL TV WY N N WW Sbjct: 287 WKQNIPFEVGLTATVDWYRCNMNAWW 312 >gi|19551573|ref|NP_599575.1| nucleoside-diphosphate-sugar epimerase [Corynebacterium glutamicum ATCC 13032] gi|62389221|ref|YP_224623.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glutamicum ATCC 13032] gi|21323087|dbj|BAB97716.1| Nucleoside-diphosphate-sugar epimerases [Corynebacterium glutamicum ATCC 13032] gi|41324554|emb|CAF18894.1| PUTATIVE DTDP-GLUCOSE 4,6-DEHYDRATASE [Corynebacterium glutamicum ATCC 13032] Length = 311 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 158/327 (48%), Gaps = 22/327 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+ + +V+VID L+ G L +L + + +F++ D+ Sbjct: 1 MRTVVTGGAGFIGSHLVDLLIKEGH-EVVVIDNLSR-GRLENLSDAEATGKLTFVEADLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L +P+ I + AA+ V S++ TNI+ T + + R Q Sbjct: 59 DVD-FNEFLGTHKPEVIFHLAAQIDVRHSVVDPLHDAETNILSTIRIADAAR-------Q 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F S +YG + E +P +P SPY+A+K S + + + H YG+ Sbjct: 111 HGVRKVVFTS-SGGSIYGEPSEFPVDETVPVDPHSPYAASKVSGEIYLNTFRHLYGLDCS 169 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P ++ + R++ G ++GDG N RD++YV D VRA YL Sbjct: 170 HIAPANVYGPRQDPHGEAGVVAIFALRLLGGLDTKVFGDGGNTRDYVYVGDVVRAFYLAS 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GER+NIG + E + L L+ + + + R G R A+ Sbjct: 230 GEIGGGERFNIGTSVETSDRQ--------LHTLVATAAGSKDDPEYAPARLGDVPRSALS 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 K K +GW P+ N+E G+ KTV ++ Sbjct: 282 FGKAKEVLGWEPEVNIEQGVAKTVEYF 308 >gi|3061300|dbj|BAA25656.1| deduced dNDP-hexose 4,6-dehydratase [Streptomyces kasugaensis] gi|157059896|dbj|BAF79703.1| putative dNDP-hexose 4,6-dehydratase [Streptomyces kasugaensis] Length = 329 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 157/329 (47%), Gaps = 23/329 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN---LFSFLQVD 58 +++VTG GFIGS L LV+ V+ +++ A + L+ +S + L + VD Sbjct: 12 QVLVTGADGFIGSHLTETLVSRGARVTAVVRRVSAAQVTHRLRNLSAATVDALERVVHVD 71 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + L + D + AA+++V S+ + + TN++ T +L L Sbjct: 72 LAGPSAV-DVLGRLEADTWFHLAADAYVPASLDQPADVVRTNVMSTLHVL---------L 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ L S+ EVYGS + +E P P++PY+A+K + D L +W HTYG+P Sbjct: 122 AAQQRQPAHLLVTSSSEVYGSQPDAI-TERHPLEPATPYAASKVACDRLAWSWHHTYGLP 180 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + N+YGP H + +PL + R + G + + G G+ RD +V D V + + Sbjct: 181 LTIVRPFNSYGPRHVYDA-VPLFLARALRGEPITINGSGEQTRDLTFVADTVAGFLALAE 239 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GE YNIG + + ID+ A++ + S +E++ R G + D Sbjct: 240 LPATGETYNIGTGTDHRIIDVA-------RAIVALTGSQSEIVHG-PPRSGEVLKLQADP 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +K+ GW + ++ GL + W ++ Sbjct: 292 AKLTEATGWRAEYDLARGLADNLVWMREH 320 >gi|118488697|gb|ABK96159.1| unknown [Populus trichocarpa] Length = 300 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%) Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 LV+A+G +YG+PV+ + +N YGP FPEKLIP I ++G + ++GDG NVR +LY Sbjct: 2 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKDLPIHGDGSNVRSYLYC 61 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 ED A ++L KG +G YN+G ER+ ID+ +I L KS I+F+E+ Sbjct: 62 EDVAEAFEVILHKGEVGHVYNVGTKKERRVIDVAKDICNLFSMDPDKS------IKFVEN 115 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 RP +D+RY +D K+K +GW E GL KT+ WY N WW + L P Sbjct: 116 RPFNDQRYFLDDQKLKI-LGWSEHTTWEEGLRKTIEWYTQNPDWWGDVTGALLP 168 >gi|145640982|ref|ZP_01796564.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R3021] gi|145274496|gb|EDK14360.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 22.4-21] Length = 139 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 65/127 (51%), Positives = 86/127 (67%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSAL RY + +++ IDKLTYAGNL SLK + ++F+Q DICD Sbjct: 8 ILVTGGAGFIGSALVRYFLEKTHNKIVNIDKLTYAGNLASLKTVENHPRYAFVQADICDT 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++QPDA+++ AAESHVDRSI + EFI TNI+GT+ LLE T +W L K Sbjct: 68 KALSYIFAQYQPDAVIHLAAESHVDRSINASSEFIQTNIVGTYCLLESTLDYWHRLDNQK 127 Query: 123 KDQFRFL 129 K Q L Sbjct: 128 KIQLPIL 134 >gi|268529624|ref|XP_002629938.1| Hypothetical protein CBG03656 [Caenorhabditis briggsae] gi|187036401|emb|CAP24501.1| hypothetical protein CBG_03656 [Caenorhabditis briggsae AF16] Length = 631 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 25/334 (7%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDIC 60 + +TGG GFIGS Y+ + + IDKL + ++ E + S + + DI Sbjct: 10 VAITGGCGFIGSNFVNYIHDAWPNCNFVNIDKLILNSDTQNVSEAVRSSPRYKLVLTDIK 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + +E + D +++FAA+ R E + NI+ L+ R + Sbjct: 70 NEAAILNVFEENEIDTVIHFAADCTSTRCYNETAEAVQNNILSFIQFLDTVRHYGKIQ-- 127 Query: 121 DKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ISTDEVYG D +G E P +PY+ATK + + V A+ Y Sbjct: 128 ------RFVHISTDEVYGDSDLSENEQGKV-ESSRLMPGNPYAATKIAGEAYVRAYQKQY 180 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV----FLYGDGQNVRDWLYVEDHVR 231 +P++ + +N YGP + K++P R IE + V + G G+ +R WL+V+D Sbjct: 181 NLPIVTARMNNIYGPNQWDVKVVP----RFIEIAKVRGEYTIQGTGKQLRSWLFVDDASA 236 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L V +KG++ E YN+G E+ D+ I +D + + + + I DRP +D Sbjct: 237 GLKAVTEKGKLNEIYNLGTYYEKNVADLAKTIQEEVDRQLDRPHQPPRY-KSIPDRPYND 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RY I K K ++GW P + + G+ TV L Sbjct: 296 LRYLISIEKAKEDLGWEPTTSFDEGMRITVASAL 329 >gi|213419484|ref|ZP_03352550.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 142 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 3/120 (2%) Query: 35 TYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD 94 TYAGNL SL +IS+SN ++F DICD I +++QPDA+++ AAESHVDRSI G Sbjct: 1 TYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA 60 Query: 95 EFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPY 151 FI TNI+GT++LLE R +WS L +DKK+ FRF ISTDEVYG L D+ S +PY Sbjct: 61 AFIETNIVGTYVLLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPY 120 >gi|239626972|ref|ZP_04670003.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47_FAA] gi|239517118|gb|EEQ56984.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47FAA] Length = 279 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 59/330 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++I+TGG+GF GS L +Y+V V L + N ++LK + F++ DI Sbjct: 8 MKVIITGGSGFAGSHLIQYMVGKYPGNDTV--NLDISANADNLKPFEDIPGYRFVKGDIG 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + E +P ++NF + N G LL+ RL+ Sbjct: 66 DKDFVLNLFAEEKPGIVINF----------------VPYNEAGVKNLLDACRLFGI---- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + Q+S E P S +A+ ++D G PV Sbjct: 106 -----RHYHQVSEGEA-------------PAQAGSTLAASIQAAD----------GFPVT 137 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +S C N YGP + LIP+AI + + G ++L G+NVRDWLYV D+ RA+ L++ +G Sbjct: 138 VSRCCNLYGPCSREDSLIPMAIAKALSGERIYLENMGENVRDWLYVADYCRAIDLIVNEG 197 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI-DSS 299 + G Y+I N+ +K+ +V I +L P++ LI + DR G DR + + D++ Sbjct: 198 KDGGTYDICSNSLQKDSHVVRTILKILGR--PET-----LIYYGNDR-GKDREWPVADTA 249 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 KI E+GW P ++++GL KT+ W++ + Sbjct: 250 KITEEMGWVPSYDLDTGLRKTIRWHMTQQY 279 >gi|310659643|ref|YP_003937364.1| nad-dependent epimerase/dehydratase [Clostridium sticklandii DSM 519] gi|308826421|emb|CBH22459.1| NAD-dependent epimerase/dehydratase [Clostridium sticklandii] Length = 321 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 106/335 (31%), Positives = 171/335 (51%), Gaps = 36/335 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE---ISQSNLFSFLQVD 58 R+++TGGAGFIGS LC L + K Q+L+ D L N NS+K +S +N+ +Q D Sbjct: 6 RILLTGGAGFIGSKLCGLLCD--KNQILLYDNL----NRNSIKNTNLLSHNNV-KLIQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D ++ + EFQP +++ AA + +D I + N+IGT+ LLE L Sbjct: 59 ILDYGSLKKIVLEFQPHIVIHLAAVAGIDTVIKSPVNTMKVNMIGTYNLLES-------L 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKASSDYLVLAW 171 + + + + ST EV+GS + +M +P YS +K ++++L ++ Sbjct: 112 KDNLTNLEKVIDFSTSEVFGSYAYKV--NEMNTTNLAPVGEARWTYSVSKLAAEHLSHSY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+PV+ N YGP E I + R I + ++GDG +R W YVED ++ Sbjct: 170 YKEYGMPVVTVRPFNIYGPGQVGEGAIHQFVVRAIADEQMQIHGDGDQIRSWCYVEDFIQ 229 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + L L+K IG+ +NIG N R + I L + + S S++E I+++ + Sbjct: 230 GIMLCLEKEEAIGQSFNIG--NPRATVT----IAMLAETIKRISNSNSE-IKYV-SKNYV 281 Query: 291 DRRYAIDS-SKIKSEIGWFPQENMESGLNKTVCWY 324 D I S K K +G+ P+ ++ GL KT+ WY Sbjct: 282 DVELRIPSIEKAKELLGFSPKYDLTEGLTKTIDWY 316 >gi|149050199|gb|EDM02523.1| TDP-glucose 4,6-dehydratase (predicted), isoform CRA_c [Rattus norvegicus] Length = 212 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 18/201 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAGFI S + LV D +++ +DKL Y +L +L+ +S + F+Q DIC Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 D ++ + + D +++FAA++HVD S + A EF N+ GT +L+ E R+ Sbjct: 79 DSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVE--- 135 Query: 118 LSQDKKDQFRFLQISTDEVY-GSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F+ +STDEVY GSLD+ F E P P++PY+++KA+++ V ++ Y Sbjct: 136 ---------KFIYVSTDEVYGGSLDQE-FDESSPKQPTNPYASSKAAAECFVQSYWERYK 185 Query: 177 IPVLLSNCSNNYGPYHFPEKL 197 PV+++ SN YGP+ +PEK+ Sbjct: 186 FPVVITRSSNVYGPHQYPEKV 206 >gi|269127907|ref|YP_003301277.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata DSM 43183] gi|268312865|gb|ACY99239.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata DSM 43183] Length = 317 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 30/326 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIGS L L++D +V+ +D L+ NL F ++D+C Sbjct: 1 MLVLVTGAAGFIGSHLVDRLLSDGH-EVIGVDDLSTGRNLRPD--------IDFHRMDVC 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A +P+ I + AA+ V S+ + N++GT +LE R S Sbjct: 52 DPALVELAAAR-RPELICHLAAQVSVRSSVQDPRQDARVNVLGTVNVLEAARAAGS---- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + L S+ VYG ++ D P P+SPY+A+K + + V + +G+ Sbjct: 107 -----RKILFASSCAVYGVPEELPVPSDAPLRPASPYAASKKAGEIYVQTYRELHGLDFT 161 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP PE ++ + ++ G+ +YGDG N RD++YV+D V A L Sbjct: 162 ILVLANVYGPRQSPEGEAGVVSIFTDALLAGAPTRVYGDGGNTRDYVYVQDVVDAFALAC 221 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G R N+G + +++ L +L+ ++ + RPG R AID Sbjct: 222 GELGSGMRLNVGTGEQTTDLE--------LHSLVAEAVGAPDEPALAPPRPGDLRAMAID 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 + +GWFP+ + GL T W Sbjct: 274 PALTHKALGWFPRTKLRDGLAATAEW 299 >gi|25026889|ref|NP_736943.1| putative dTDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259506047|ref|ZP_05748949.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|23492169|dbj|BAC17143.1| putative dTDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259166335|gb|EEW50889.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] Length = 311 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 160/330 (48%), Gaps = 22/330 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+ +V+VID L+ G + +L++ + +F++ D+ Sbjct: 1 MRTVVTGGAGFIGSHLVDLLIAHGH-EVVVIDNLSR-GRVENLRDAEATGKLTFVEADLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E P+ I + AA+ V S+ TNI+ T + + R Sbjct: 59 DVD-FNEFLAEHTPEVIFHLAAQIDVRASVADPLHDAETNILSTIRIADAARSHGV---- 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F S +YG + SED+P +P SPY+A+K S + + + H YG+ Sbjct: 114 -RKVVF---TSSGGSIYGEPSEFPVSEDVPVDPHSPYAASKVSGEIYLNTYRHLYGLDCS 169 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P ++ + R++ G ++GDG N RD++YV D VRA YL Sbjct: 170 HIAPANVYGPRQDPHGEAGVVAIFSQRLLAGEPTRVFGDGGNTRDYVYVGDVVRAFYLAS 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G R+NIG + E + L L+ ++ + + R G R A+ Sbjct: 230 GEIGGGMRFNIGTSVETSDRQ--------LHTLVAEAAGAQDDPEYAPARLGDVPRSALS 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ K +GW P+ +++ G+ TV ++ N Sbjct: 282 FARAKEVLGWEPEVDIKQGVANTVEYFRHN 311 >gi|289642906|ref|ZP_06475041.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289507289|gb|EFD28253.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 316 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS + ++ D V+ +D L+ G L +L + + FSF +VDI Sbjct: 1 MRILVTGAAGFIGSTVTDRMLADGH-DVVGVDDLS-TGRLENLGPALRDHRFSFEKVDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCL 118 E I ++ +PD +++ AA+ V S+ +D + N++GT +LE +RL Sbjct: 59 SAELI-GVVERIRPDVVLHLAAQIDVRVSV--SDPLLDARLNVLGTINVLEASRLAGVG- 114 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F+ S+ +YG+ E +P P S Y+A KA+ + + + TYG+ Sbjct: 115 --------KFVHTSSGGSIYGTPQHLPVDETVPVAPESQYAAGKAAGELYLSVYRSTYGL 166 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P ++ + T M+EG ++GDG RD+++V D A Sbjct: 167 ATTALALGNVYGPRQDPHGEAGVVAIFGTAMLEGRPTRIFGDGTTTRDYVFVGDVADAFA 226 Query: 235 L-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 V GER NIG + + D L + I + + F RPG +R Sbjct: 227 RSVPSDAANGERLNIGTSTQTTVRD--------LHSAIAEIVGVADAPEFAPPRPGELQR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A+D + +GW PQ +++ GL +TV W Sbjct: 279 IALDIGRAARLVGWRPQVDLDDGLRQTVQW 308 >gi|325143334|gb|EGC65668.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis 961-5945] Length = 131 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 61/122 (50%), Positives = 88/122 (72%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICDR Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R +W + ++ Sbjct: 69 AELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQ 128 Query: 123 KD 124 + Sbjct: 129 HE 130 >gi|301118530|ref|XP_002906993.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108342|gb|EEY66394.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 350 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 33/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL---------- 51 R+ VTG AGFIG + L+ V+++D++ ++ ++ QSNL Sbjct: 27 RIFVTGAAGFIGFHTAKALLARGD-DVVIVDEMNDYYDV----KLKQSNLDWLTSNYGDR 81 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 S D+CD + +R LKE +PDA+V+ AA + V SI +I N++ T +LL+ Sbjct: 82 VSVYIGDLCDEQLVRRVLKETKPDAMVHLAARAGVRPSIDNPLLYIQANVVATMLLLDAC 141 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLA 170 R + +F+ S+ VYG K FSE D+ P SPY+ATK S + L Sbjct: 142 REFGIK---------KFVYASSSSVYGGSMKESFSEEDIVDYPVSPYAATKKSCELLAHT 192 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+ + YGP P+ + R+ + YGDG + RD+ +++D V Sbjct: 193 YHHLYGMDTIGLRFFTVYGPRGRPDMAPFKFMDRIARDVAIDQYGDGSSSRDYTFIDDIV 252 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + + L L +G E +N+G D + A+I T I + D+PG Sbjct: 253 QGVLLSLDRGHGCEVFNLGRGTPVLLTDFI--------AIIEGLVGKTAKINILPDQPGD 304 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + D SK + +G+ P +E GL KT WY Sbjct: 305 VPRTSADISKAERLLGYKPTTPLEQGLAKTWEWY 338 >gi|281411855|ref|YP_003345934.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] gi|281372958|gb|ADA66520.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] Length = 323 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 23/337 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+++VTG GFIGS L +L+ +D++ V + + G L K I + +++ Sbjct: 1 MKILVTGAGGFIGSHLTEFLIEKGHDVRAFVRY-NSRNFWGWLEKSKVIDKIEVYTG--- 56 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + +A+K D + + AA + S + +I TN+ GT+ +L+ R Sbjct: 57 DVRDYDSVYNAMKGV--DVVFHLAALIGIPYSYISPLAYIKTNVEGTYNILQAAR----- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ R + ST E+YG+ E PYNP SPY+A+KA++D+L L++ ++G+ Sbjct: 110 ----ERKVSRVVHTSTSEIYGTAQYVPIDEKHPYNPQSPYAASKAAADHLALSFYRSFGL 165 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 PV + N YGP +IP I +++ G G+ + RD+ +V D VR Y V Sbjct: 166 PVTIIRPFNTYGPRQSARAVIPTIIIQILSGKERIKLGNLRPTRDFNFVIDIVRGFYEVG 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L +GE +N+G E D+ I L+ K + RF ++ +R A Sbjct: 226 LHPDSVGEVFNLGTGREVSIGDLPKIIAKLIGK---KVEVEMDKNRFRPEKSEVERLCA- 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D++K GW P+ + E GL T+ W+ D ++P Sbjct: 282 DATKAAELSGWKPKYSFEEGLKITIEWFRDRLENFKP 318 >gi|331695723|ref|YP_004331962.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] gi|326950412|gb|AEA24109.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] Length = 335 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 107/346 (30%), Positives = 159/346 (45%), Gaps = 27/346 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAGFIGS L R LV D V V+D LT AG+ +L+ + ++ + + DI D Sbjct: 8 RLLVTGGAGFIGSELVRQLVED-GAHVTVLDNLT-AGHRRNLEALP-ADGYRLVVADIRD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + + DA+ + A V SI E N GT LL+ R Sbjct: 65 LERVDALMPGI--DAVFHLACRG-VRHSIHSPVENHGVNATGTLGLLKSAR--------- 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D RF+ +ST EVYGS + SED P++ Y A+K + + A+ TY P ++ Sbjct: 113 AADVPRFVYVSTSEVYGSAPQVPMSEDNLALPTTVYGASKLAGECYTRAFHRTYDYPTVV 172 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 N+YGP E ++IP + R + G + ++GDG RD+ +V D R + Sbjct: 173 VRPFNSYGPRSHHEGDSGEVIPKFMLRSMAGLPMVVFGDGSQTRDFTFVADTARGILAAG 232 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +GE N+G E V E+ + ++ + I +E RPG R Sbjct: 233 ASDAAVGETINVGSGKEIT----VAELAATVSKVVGGGDA---TIEHVEQRPGDVLRLKA 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 D S+ + +GW P + GL++ WYL L E K N Sbjct: 286 DVSRATALLGWAPTVPLADGLSQLRDWYLQGGSSPEDLLAEEKVRN 331 >gi|316932797|ref|YP_004107779.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] gi|315600511|gb|ADU43046.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] Length = 345 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 19/324 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI-C 60 + +V G F G+++ YL+ D +V+ I + ++ F F ++D+ Sbjct: 20 KYLVIGSNSFTGASMVSYLL-DQGAEVVGISRSDEPHPAFLPYRWKNADRFRFHRLDLNH 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I + + I+NFAA+S V S D + TN++ T L E R +C Sbjct: 79 DLDAIMQMVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLR---TCDFL 135 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R++ ++T EVYG+ G +ED ++PS+PY+ ++A+ D + ++ YG PVL Sbjct: 136 E-----RYVHVTTPEVYGNA-TGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVL 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +++P I + G + L+G G + R +++ D A + G Sbjct: 190 FTRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 ++G+ Y+I + D + I L++ + + E + + DR G D Y +DSS Sbjct: 250 KLGDSYHI-------STDRIVTIRALVEMICAMMGARFEDQVEIVGDRLGKDSAYKLDSS 302 Query: 300 KIKSEIGWFPQENMESGLNKTVCW 323 K++SE+GW Q +E G+ +T+ W Sbjct: 303 KLRSELGWSDQITLEQGIEQTIAW 326 >gi|300768383|ref|ZP_07078285.1| possible dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494061|gb|EFK29227.1| possible dTDP glucose 4,6-dehydratase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 202 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/179 (44%), Positives = 105/179 (58%), Gaps = 22/179 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 L++TGGAGFIG+ RY+ + K+Q +++DKLTYAGN +L +I N + DIC Sbjct: 3 HLLITGGAGFIGANFARYVYDSHPKVQTIILDKLTYAGNRANLTDI-LGNRVKLVVGDIC 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + DAIV+FAAESH D+S++ FI TNI GT+ L++ Sbjct: 62 DAPLVDRLVS--KADAIVHFAAESHNDKSLINPWPFIQTNIGGTYTLIQAA--------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL--------DKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 K RF +STDEVYG L D+ F+ PY PSSPYSA+KASSD LV AW Sbjct: 111 -TKYHKRFHHVSTDEVYGDLPLTEHGSGDESKFTPTSPYQPSSPYSASKASSDMLVRAW 168 >gi|332157986|ref|YP_004423265.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2] gi|331033449|gb|AEC51261.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2] Length = 306 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/325 (31%), Positives = 163/325 (50%), Gaps = 32/325 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L D V+VID L Y+G L ++ E N+ F++ D+ D Sbjct: 6 VVITGGAGFIGSHLAEALAEDN--DVVVIDNL-YSGKLENIPE----NV-KFVEADVRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I ++E D + + AA+ V+ SI N+IGT + L Sbjct: 58 EKIADIIRE--ADYVFHEAAQISVEESIRDPVFTEEVNVIGTI----------NVLRALA 105 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + + S+ VYG + ED P SPY TK + ++ + YG+P+++ Sbjct: 106 EGEGKLIFASSAAVYGDPIELPIKEDSELRPISPYGITKLTGEHYCRVYYELYGVPIVVL 165 Query: 183 NCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YGP +I + + R I G + +YGDG+ RD+++V+D V A LV KK Sbjct: 166 RYFNVYGPRQSSAYAGVISIFMERAIRGEPLIIYGDGKQTRDFIFVKDVVDANLLVAKKE 225 Query: 241 RI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 R GE +N+ E ID+ ++ I S S +++I F RPG +R D Sbjct: 226 RANGEVFNVATGRETMIIDLALKV-------IELSSSPSQII-FYPPRPGDIKRSVADIG 277 Query: 300 KIKSEIGWFPQENMESGLNKTVCWY 324 KI+ ++G+ P+ ++E GL +T W+ Sbjct: 278 KIR-KLGFKPKYSLEEGLKETFSWF 301 >gi|270635196|ref|ZP_06222055.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270317456|gb|EFA28951.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 258 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 84/109 (77%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGG+GFIGSAL RY++ + V+ IDKLTYA N ++LKE+ + ++F Q+DIC Sbjct: 1 MNILITGGSGFIGSALIRYIIYQTQDSVINIDKLTYAANQSALKEVENNPRYAFEQIDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 D + I S +++QPDA+++ AAESHVDRSI GA +FI TNI+GT+ LLE Sbjct: 61 DLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLE 109 >gi|311741402|ref|ZP_07715226.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303572|gb|EFQ79651.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] Length = 320 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L LV + +V+V+D ++ G + +L + S ++ DI Sbjct: 8 MKTLVTGGAGFIGSHLVDLLVENGH-EVVVLDNFSH-GRMENLVDAQASGKVVVVEDDI- 64 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 R AL KE +P+ I + AA+ V +S+ +NI + + + Sbjct: 65 -RTVDFPALFKEHKPEVIFSLAAQIDVRKSVAEPLTDADSNISAV--------IRMATAA 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +D + S +YG D SE P +P SPY+ +K + + + ++ + YG+ Sbjct: 116 KDCGVRRIVHTSSGGAIYGEPDSFPVSEKTPVDPKSPYAVSKVAGELYLKSFSYLYGLET 175 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + +++EG+ F +G G N RD+++V+D RA L Sbjct: 176 AFIAPANVYGPRQDPHGEAGVVAIFSQKLLEGAETFAFGKGDNTRDYVFVKDVARAFILA 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++G G RYNIG E ++ + L+ A + + T L + D P R ++ Sbjct: 236 AQQGVDGTRYNIGTGRETSDL----ALHQLIAAEVGVAAEPTMLPARLGDLP----RSSL 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 DSS +E+GW P +E GL +TV ++ Sbjct: 288 DSSLAGAELGWKPDFELEQGLAETVSYF 315 >gi|228470351|ref|ZP_04055255.1| UDP-glucuronate 5'-epimerase [Porphyromonas uenonis 60-3] gi|228308094|gb|EEK16969.1| UDP-glucuronate 5'-epimerase [Porphyromonas uenonis 60-3] Length = 358 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQ 56 ++VTG AGFIG AL + L+ND + I+++ +D LT ++ KE I + F F++ Sbjct: 13 VLVTGVAGFIGGALAKRLLNDFVSIKIIGVDNLTSYYDIRLKKERLKDLIEYGDRFVFIE 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I ++E + +++P +VN AA++ V SI D +I +N+IG F +LE R + Sbjct: 73 ASIANKEVVEQLFAQYRPSVVVNLAAQAGVRYSISHPDTYIESNLIGFFNILEACRHSYD 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L K + S+ VYGS K +S +D NP S Y+ATK S++ + A+ + Sbjct: 133 GL---KSGVDHLIYASSSSVYGSNTKVPYSVDDKVDNPVSLYAATKKSNELMAHAYSKLF 189 Query: 176 GIPVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGS-HVFLYGDGQNVRDWLYVEDHVRAL 233 IP YGP P+ T + +G+ +F YG+ + RD+ Y++D V + Sbjct: 190 NIPATGLRFFTVYGPCGRPDMAYFGFTETLLNDGTIQIFNYGNCK--RDFTYIDDIVEGI 247 Query: 234 YLVLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTE 279 +++ ++GE YNIG NN +D V + + +P+ Y Sbjct: 248 IRIMRHAPERKVGEDGLPIPPYKVYNIGNNNPENLLDFVQTLQEELVKARALPRDYDFAA 307 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + +PG D++ ++ + G+ P ++ GL V WY+ ++ Sbjct: 308 HTKLVPMQPGDVPITYADTTPLEEDFGFKPNTSLREGLRAFVQWYVKSH 356 >gi|167461175|ref|ZP_02326264.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Paenibacillus larvae subsp. larvae BRL-230010] Length = 127 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 10/123 (8%) Query: 83 ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-D 141 +SHVDRSI F+ TN++GT +LLE + ++ RF+QISTDEVYG+L Sbjct: 4 KSHVDRSIADPQSFVRTNVLGTQVLLE---------AAQRQGVTRFIQISTDEVYGTLGP 54 Query: 142 KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLA 201 +GLF+E P P+SPYSA+KA +D L A+ TYG PV+++ CSNNYGP+ FPE+LIP Sbjct: 55 EGLFTETTPLEPNSPYSASKAGADLLARAYFETYGFPVIVTRCSNNYGPFQFPERLIPTL 114 Query: 202 ITR 204 IT+ Sbjct: 115 ITQ 117 >gi|146342030|ref|YP_001207078.1| putative dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] gi|146194836|emb|CAL78861.1| putative dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] Length = 332 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 147/271 (54%), Gaps = 16/271 (5%) Query: 54 FLQVDI-CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F +VD+ D + +++ L +P +VNFAA+S V S L D ++ TN++ L + R Sbjct: 58 FKRVDLNHDLDVLKALLASERPTHVVNFAAQSMVGESWLYPDHWMMTNVVSAVRLHDILR 117 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + D D R++ ++T EVYGS + G ED P+NPS+PY+ ++A+ D + + Sbjct: 118 NY------DGLD--RYVHVTTPEVYGSTE-GWVREDAPFNPSTPYAVSRAAGDMSLRTYF 168 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y PV+ + +N YGP +++P I + G + L G G++VR ++++ D A Sbjct: 169 ANYQFPVVFTRAANVYGPGQQLYRIVPRTIVAAMTGQKLRLDGGGKSVRVFIHMTDVSDA 228 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + G+ GE Y+I G E +I + E ++ A + K++ + + +RPG D Sbjct: 229 TVKIGRSGKPGETYHISG-YELVSIRTLVE---MILARLGKNFE--DCVEIGPERPGKDT 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y +DS K+++E+GW +E G++ + W Sbjct: 283 AYTLDSFKLRTELGWRDTFALEQGIDDVIAW 313 >gi|254294742|ref|YP_003060765.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] gi|254043273|gb|ACT60068.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] Length = 349 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 19/333 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL V+GG GF+GS+L + V + V +D A L E+ +S L ++ Sbjct: 1 MRLFVSGGCGFVGSSLVKQAVIN-GSHVFNMDMRNTAQIAPQLAEVKGKKNYSQLIGNVT 59 Query: 61 DRECIRSALKEFQPDAIVNFA---AESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D + + LKEF+PDA ++ A +E H S+ GA+ T +LE + ++ Sbjct: 60 DSVMLSALLKEFKPDAFIHCAGGLSEKHGTPSLQGAE--------ATIGVLEAVKTYYKS 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L + + +F+ + +YGSL+ + F + P + +S +A LV W Sbjct: 112 LDETAQKKFKLVIPFNTLIYGSLNGSVAEFDTNTPLSTTSITAARAVMDLVLVNGWSAET 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IPV+ + S YGP + LIP + ++ + + + DWL+V+D L Sbjct: 172 KIPVIYAGASAIYGPNQNSDALIPSVLKAAVKQTSIS-PDRAYDTLDWLHVDDFADGLLA 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--- 292 K G+ G Y G +ER++IDI + +LD + P++ H + D P Sbjct: 231 AAKSGKNGHTYLFSGRSERRHIDITTNVLMILDGVYPRN-DHQSYKVLLHDAPQSQTAPL 289 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R A+ K ++++ W+ + N+ GL +TV W + Sbjct: 290 RCALSPIKAETDLNWYAKNNLLMGLRETVIWNM 322 >gi|301118532|ref|XP_002906994.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108343|gb|EEY66395.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 343 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/334 (29%), Positives = 156/334 (46%), Gaps = 33/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL---------- 51 R+ VTG AGFIG + L+ V+++D++ ++ ++ QSNL Sbjct: 23 RIFVTGAAGFIGFHTAKALLARGD-DVVIVDEMNEYYDV----KLKQSNLDWLTTNYGDR 77 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 S D+CD +R LKE +PDA+V+ AA + V SI +I N++ T +LL+ Sbjct: 78 VSVYIGDLCDERLVRRVLKETKPDAMVHLAARAGVRPSIDNPLLYIQANVVATMLLLDAC 137 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLA 170 R + + + S+ VYG K FSE D+ P SPY+ATK S + L Sbjct: 138 REFGIK---------KLVYASSSSVYGGSMKESFSEEDIVDYPVSPYAATKKSCELLAHT 188 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+ + YGP P+ + R+ + YGDG + RD+ +++D V Sbjct: 189 YHHLYGMDTIGLRFFTVYGPRGRPDMAPFKFMDRIARDVAIDQYGDGSSSRDYTFIDDIV 248 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + + L L +G E +N+G D + A+I T I + D+PG Sbjct: 249 QGVLLSLDRGHGCEVFNLGRGTPVLLTDFI--------AIIEGLVGKTAKINILPDQPGD 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + D SK + +G+ P +E GL KT WY Sbjct: 301 VPRTSADISKAERLLGYKPTTPLEQGLAKTWEWY 334 >gi|39936986|ref|NP_949262.1| putative dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris CGA009] gi|39650843|emb|CAE29366.1| putative dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris CGA009] Length = 345 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 161/324 (49%), Gaps = 19/324 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI-C 60 + +V G F G+++ YL+ D V+ I + +++ F F ++D+ Sbjct: 20 KYLVIGSNSFTGASMVSYLL-DQGADVVGISRSDEPHPAFLPYRWKKADRFRFQKLDLNH 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I + + I+NFAA+S V S D + TN++ T L E R+ C Sbjct: 79 DLDAIMQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLRI---CDFL 135 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R++ ++T EVYG+ G +ED ++PS+PY+ ++A+ D + ++ YG PVL Sbjct: 136 E-----RYVHVTTPEVYGNA-TGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVL 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +++P I + G + L+G G + R +++ D A + G Sbjct: 190 FTRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 ++G+ Y+I + D + I L++ + E + + +R G D Y +DSS Sbjct: 250 KLGDSYHI-------STDRIVTIRALVEMICAMMRVRFEDQVEIVGERLGKDAAYKLDSS 302 Query: 300 KIKSEIGWFPQENMESGLNKTVCW 323 K++SE+GW Q +E G+ +T+ W Sbjct: 303 KLRSELGWSDQITLEQGIEQTIAW 326 >gi|284047879|ref|YP_003398218.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] gi|283952100|gb|ADB46903.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] Length = 332 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 30/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL----NSLKEISQSNLFSFLQV 57 ++++TG AGFIG L + L++ L +QV +D + ++ + L + FSF Q Sbjct: 9 KILITGAAGFIGYHLAKRLLS-LGVQVAGLDNMNAYYDVQLKKDRLARLELYPAFSFTQG 67 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E + +EF+PD +VN AA++ V SI E+I +NIIG F +LE R + Sbjct: 68 DLADGETVNRIFEEFRPDIVVNLAAQAGVRYSIDHPREYIDSNIIGFFNILEACRHYQPE 127 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L S+ VYG+ K F + D +P S Y+ATK S + + + H YG Sbjct: 128 ---------HLLFASSSSVYGNQKKTPFATTDNVDHPISLYAATKKSDELMAYTYCHLYG 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ ++++G + ++ G RD+ YV+D V + + Sbjct: 179 IPSTGLRFFTVYGPFGRPDMAYFKFTNKIMKGEPITIFNQGDMYRDFTYVDDIVTGIQNM 238 Query: 237 L----KKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L K G+R YNIG N+ K + + + K+ T ++ +PG Sbjct: 239 LCCPPKPNGEGDRYKIYNIGNNHPEKLMTFI--------ETLEKALGKTAEKEYMPMQPG 290 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S+++ + G+ P ++ GL K WY Sbjct: 291 DVYQTYADVSELEKDFGFRPSTSIAEGLGKFARWY 325 >gi|206890126|ref|YP_002249176.1| WbnF [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742064|gb|ACI21121.1| WbnF [Thermodesulfovibrio yellowstonii DSM 11347] Length = 323 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 28/342 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQVD 58 + VTG AGFIG A C+ L+N V+ ID + Y + L+ ++ + F F + D Sbjct: 4 IFVTGSAGFIGWATCKLLLNK-GFTVIGIDNINDYYDPKIKELRLQDLKKFQNFIFYKAD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D E +++ K ++ D ++N AA + V S+ ++ TN+ GT LLE C+ Sbjct: 63 IEDFENLKNIFKSYKIDGVINLAARAGVRASVENPWGYLDTNVRGTINLLE-------CV 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + F + ST VYG +K F D+ P +PY A+K S++ ++ + YGI Sbjct: 116 KEYAIKNF--VLASTSSVYGDTEKMPFKVSDITDKPLAPYPASKKSAELFCYSYHYLYGI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ YGP+ P+ I I ++ +G + +YGDG+ RD+ +VED A L L Sbjct: 174 NTIIPRYFTVYGPFGRPDMSIFRFIKKINDGEPITVYGDGKQKRDFTFVEDIAEATVLCL 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 E Y I + +++++ I L++ LI K I++ P D Sbjct: 234 NL----EGYKIMNFGNDRPVELIYVIN-LIEELIGKKAK----IQWQPRHPADIYATWAD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 S+ K IGW P+ ++E G+ TV W+ +N R L K++K Sbjct: 285 ISEAKQYIGWSPKISIEEGIRITVEWFKEN----RDLLKDIK 322 >gi|317479986|ref|ZP_07939101.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] gi|316903931|gb|EFV25770.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] Length = 348 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 30/350 (8%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQ-SNLFSF 54 M ++VTG AGFIGS LC R L L V+ +D L ++N L+++++ N F F Sbjct: 1 MNVLVTGAAGFIGSNLCMRLLEEQLDTLVVGLDNLNTYYDVNIKQWRLEQLTKFGNRFVF 60 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ +I D+ + E+QP +VN AA++ V SI +I +N+IG + +LE R Sbjct: 61 VKGNIADKALVDKLFDEYQPQIVVNLAAQAGVRYSITNPGAYIESNLIGFYNILEACRHS 120 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 + + ++ + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Sbjct: 121 Y---DEGREGVKHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSK 177 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 178 LYDIPSTGLRFFTVYGPAGRPDMAYFGFTDKLLKGEKIKIFNYGNCKRDFTYVDDIVEGV 237 Query: 234 YLVLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---S 276 V+ K R+GE YNIG N+ +D V + + ++P Y + Sbjct: 238 MRVMAKAPERRMGEDGLPIPPYKVYNIGNNHPENLLDFVQILQEELIRAGVLPADYDFEA 297 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 H EL+ +PG D++ + + G+ P ++ GL WY D Sbjct: 298 HKELVPM---QPGDVPVTYADTTALGRDFGFKPNTSLREGLRNFAEWYKD 344 >gi|239628045|ref|ZP_04671076.1| UDP-glucuronate 4-epimerase [Clostridiales bacterium 1_7_47_FAA] gi|239518191|gb|EEQ58057.1| UDP-glucuronate 4-epimerase [Clostridiales bacterium 1_7_47FAA] Length = 365 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 175/358 (48%), Gaps = 35/358 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKE------ISQ----SN 50 ++++TG AGFIG+ L L+ + IQ++ ID L ++ SLKE IS+ S Sbjct: 12 KVLITGAAGFIGANLAVSLLRTVDSIQIIGIDNLNDYYDV-SLKEYRLKHIISEAGKSSG 70 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F++ DI ++E + +++ PD +VN AA++ V SI+ D +I +N+IG + +LE Sbjct: 71 TFTFIKGDIAEKETVFGLFQQYCPDIVVNLAAQAGVRYSIINPDAYIKSNLIGFYHILEA 130 Query: 111 TRLWWSCLSQDKKDQF--RFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYL 167 R SQDK + S+ VYGS K +S D P S Y+ATK S++ L Sbjct: 131 CR-----HSQDKTKGGVEHLVYASSSSVYGSNKKIPYSVNDKTDYPVSLYAATKKSNELL 185 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 + YG+P YGP P+ +M++G + ++ G RD+ Y++ Sbjct: 186 AYTYATLYGLPSTGLRFFTVYGPAGRPDMAYFDFTNKMMKGETIKIFNHGNCKRDFTYID 245 Query: 228 DHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 D V + VL+ RI +R YNIG N+ ++ V E + L+P Y Sbjct: 246 DIVNGVEEVLQ--RIPKRSENGVPCKIYNIGNNSPENLLEFVHILEHALKCEQLLPADYD 303 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + + +PG D ++IK + + P+ ++ G+ K WY N++ + + Sbjct: 304 LEAHMELVGMQPGDVEVTYADITEIKRDFNFQPKTDLRDGMKKFAKWY--KNFYVKGM 359 >gi|192292814|ref|YP_001993419.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] gi|192286563|gb|ACF02944.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] Length = 345 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 161/324 (49%), Gaps = 19/324 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI-C 60 + +V G F G+++ YL+ D V+ I + +++ F F ++D+ Sbjct: 20 KYLVIGSNSFTGASMVSYLL-DQGADVVGISRSDEPHPAFLPYRWKKADRFRFQKLDLNH 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I + + I+NFAA+S V S D + TN++ T L E R+ C Sbjct: 79 DLDAIIQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLRI---CDFL 135 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R++ ++T EVYG+ G +ED ++PS+PY+ ++A+ D + ++ YG PVL Sbjct: 136 E-----RYVHVTTPEVYGNA-TGTLTEDAVFDPSTPYAVSRAAGDMSLRSYFRAYGFPVL 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +++P I + G + L+G G + R +++ D A + G Sbjct: 190 FTRAANVYGPGQRLYRIVPRTILFIKLGRKLQLHGGGTSERSFIHAADVADATRRIACNG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHDRRYAIDSS 299 ++G+ Y+I + D + I L++ + E + + +R G D Y +DSS Sbjct: 250 KLGDSYHI-------STDRIVTIRALVEMICAMMRVRFEDQVEIVGERLGKDAAYKLDSS 302 Query: 300 KIKSEIGWFPQENMESGLNKTVCW 323 K++SE+GW Q +E G+ +T+ W Sbjct: 303 KLRSELGWSDQITLEQGIEQTIAW 326 >gi|88858128|ref|ZP_01132770.1| probable UDP-glucose 4-epimerase [Pseudoalteromonas tunicata D2] gi|88819745|gb|EAR29558.1| probable UDP-glucose 4-epimerase [Pseudoalteromonas tunicata D2] Length = 329 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 151/335 (45%), Gaps = 35/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV Q + L + N + S L ++V DI Sbjct: 9 VLVTGADGFIGSHLCELLVQ----QGYKVRALVQYNSFNHWGWLDNSPLTKEMEVVTGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + K+ + + + AA + S D ++ TN+ GT + C + Sbjct: 65 RDPHFCKLITKDIE--IVFHLAALIAIPYSYTAPDSYVATNVTGTLNI---------CQA 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ E P P SPYSA+K +D + +++ + + +PV Sbjct: 114 AKENKVARVIHTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIGADMMAMSFYNAFELPV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLK 238 ++ N YGP +IP IT++ G GD RD+ YV D R L L Sbjct: 174 TIARPFNTYGPRQSARAVIPTIITQIANGQKQIKLGDVSPTRDFNYVTDTCRGFLALAQS 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRRY 294 IG+ +NIG N FEI + D L T + FI D RP + Sbjct: 234 DATIGDTFNIGSN---------FEIS-IHDTLNLIKKIMTSDVEFIIDEQRLRPKDSEVH 283 Query: 295 AI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + D+SKI + G+ P+ ++E GL+ TV W+LDN Sbjct: 284 RLWCDNSKITALTGFAPEISIEQGLSHTVDWFLDN 318 >gi|294506617|ref|YP_003570675.1| NAD-dependent epimerase/dehydratase family [Salinibacter ruber M8] gi|294342945|emb|CBH23723.1| NAD-dependent epimerase/dehydratase family [Salinibacter ruber M8] Length = 371 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 104/335 (31%), Positives = 155/335 (46%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL----FSF 54 M + VTGGAGFIG LCR L+ND V ID Y +LKE + F+ Sbjct: 45 MHVCVTGGAGFIGGHLCRRLLNDGHC-VTAIDNFDPFYP---RALKEEGIGDFPRERFTL 100 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DIC+ + + AL DAIV+ AA + V SI + TN+ GT +LE + Sbjct: 101 IEADICNTDALLQALHARDVDAIVHLAARAGVRPSIEAPMAYEETNVGGTQSMLEVAQ-- 158 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGH 173 + F+ S+ VYG+ D F+E P P SPY+ATK S + L + H Sbjct: 159 -------ELGIGTFIYGSSSSVYGTNDTVPFAEGGPVGEPISPYAATKRSGELLAHTFHH 211 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+ V YGP P++ I +++ + +YGDG + RD+ YV D V + Sbjct: 212 LYGLTVHCLRFFTVYGPRQRPDQAIHRFARQLLTDQPITMYGDGTSRRDYTYVADIVDGI 271 Query: 234 YLVLKKGR-----IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L++ + E N+GG+ + D++ I +D + P+ I + +P Sbjct: 272 VRSLRRAKGLDAPEHEIINLGGSETTQLKDLISGIAEAMD-IAPE-------IEQLPTQP 323 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G R D SK K + W P+ + GL K W Sbjct: 324 GDVERTYADISKAKRLLDWTPETPIVEGLQKFADW 358 >gi|237755632|ref|ZP_04584245.1| UDP-glucuronate 5'-epimerase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692196|gb|EEP61191.1| UDP-glucuronate 5'-epimerase [Sulfurihydrogenibium yellowstonense SS-5] Length = 326 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 104/340 (30%), Positives = 166/340 (48%), Gaps = 34/340 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 +++TG AGFIG +L+ + +V+ +D L ++ LKE + +L F F V Sbjct: 4 VLLTGAAGFIGWKTAEFLLKE-GYKVIGVDNLNNYYDVR-LKEHRKKDLEKYENFKFYPV 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + + +++ D ++N AA + V S++ ++TTN GT LLE + Sbjct: 62 DIENLQALEILFNDYKFDVVINLAARAGVRYSMINPYVYMTTNANGTLNLLELMK----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K +F+ ST +Y F ED+P N P SPY+A+K +++ + + + YG Sbjct: 117 ----KYSVKKFVLASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKAAEVMAYTYHYLYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I V + YGP P+ I I + EG + LYGDG RD+ YV+D R L Sbjct: 172 IDVSVVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIILYGDGSQSRDFTYVDDIARGTILA 231 Query: 237 LKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD---R 292 K+ +G E N+GG ++ V E ++A + K I+ RP H + Sbjct: 232 TKE--LGYEIINLGGGKNPISLKRVIET---IEAHLGKK-------AVIDYRPFHKADLK 279 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D +K K+ +GW P + E G+ KTV WYL+N W + Sbjct: 280 ETWADITKAKNLLGWEPNVSFEEGIKKTVDWYLENRDWLK 319 >gi|188996112|ref|YP_001930363.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931179|gb|ACD65809.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium sp. YO3AOP1] Length = 326 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 34/340 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 +++TG AGFIG +L+ + +V+ +D L ++ LKE + +L F F V Sbjct: 4 VLLTGAAGFIGWKTAEFLLKE-GYKVIGVDNLNNYYDVR-LKEYRKKDLEKYENFKFYPV 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + + +++ D ++N AA + V S++ ++TTN GT LL+ + Sbjct: 62 DIENLQALEILFNDYKFDVVINLAARAGVRYSMINPYVYMTTNANGTLNLLDLMK----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K +F+ ST +Y F ED+P N P SPY+A+K +++ + + + YG Sbjct: 117 ----KYSVKKFVLASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKAAEVMAYTYHYLYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I V + YGP P+ I I + EG + LYGDG RD+ YV+D R L Sbjct: 172 IDVSVVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIILYGDGSQSRDFTYVDDIARGTILA 231 Query: 237 LKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD---R 292 K+ +G E N+GG ++ V E ++A + K I+ RP H + Sbjct: 232 TKE--LGYEIINLGGGKNPISLKRVIET---IEAHLGKK-------AVIDYRPFHKADLK 279 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D +K K+ +GW P+ + E G+ KTV WYL+N W + Sbjct: 280 ETWADITKAKNLLGWEPKVSFEEGIKKTVDWYLENRDWLK 319 >gi|320450036|ref|YP_004202132.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] gi|320150205|gb|ADW21583.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] Length = 310 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 162/333 (48%), Gaps = 35/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + LV + ++V V+D L+ N K I F +VD+ Sbjct: 1 MRVLVTGGAGFIGSHIAESLVRE-GVEVAVLDNLSTGRRENVPKGIY------FYKVDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + +EF+P + + AA++ V S+ N++G+ LLE R W + Sbjct: 54 DKESLERVFREFRPTHVSHQAAQASVKVSVDNPTLDFEVNLLGSLNLLEAMRKWGA---- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ F + +YG + +G +E+ P P SPY+A+KAS ++ + A+G YG+ Sbjct: 110 ---EKMVFAS-TGGAIYGEVPEGERAEETWPPKPKSPYAASKASFEHYLSAYGQNYGLKW 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHVR 231 + N YGP P ++ + R+++G V LY GD VRD++YV D VR Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFSERILKGEPVTLYARRTPGDEGCVRDYIYVADVVR 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L LK + YN+G +++ A+ + H E + RPG Sbjct: 226 AHNLALKG--LEGIYNVGTGEGHTTQEVLL-------AVAEAAGKHPE-VNPAPPRPGDL 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + K+ + GW P+ + G+ TV ++ Sbjct: 276 ERSVLSPLKLMAH-GWRPEVGFQEGIRLTVEYF 307 >gi|83815943|ref|YP_444772.1| NAD dependent epimerase/dehydratase family protein [Salinibacter ruber DSM 13855] gi|83757337|gb|ABC45450.1| NAD dependent epimerase/dehydratase family protein [Salinibacter ruber DSM 13855] Length = 327 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 29/333 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQ 56 M + VTGGAGF+G LCR L+++ +V ID A +++ + F+ ++ Sbjct: 1 MHVCVTGGAGFVGGHLCRRLLDEGH-RVTAIDNFDPFYPRAIKEEGIEDFPRER-FTLIE 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DIC+ + AL DAIV+ AA + V SI + TN+ GT +LE + Sbjct: 59 TDICNTDAFLQALHARDVDAIVHLAARAGVRPSIEAPMAYEETNVGGTQSMLEVAQELGI 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 F+ S+ VYG+ D F+E P + P SPY+ATK S + L + H Y Sbjct: 119 GT---------FIYGSSSSVYGTNDTVPFAEGDPVDAPISPYAATKRSGELLAHTFHHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V YGP P++ I +++ G + +YGDG + RD+ YV D V + Sbjct: 170 GLTVHCLRFFTVYGPRQRPDQAIHKFARQLLTGQPITMYGDGTSRRDYTYVADIVDGIVR 229 Query: 236 VLKKGR-----IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L++ + E N+GG+ + D++ I +D + P+ I + +PG Sbjct: 230 SLRRAKGLDAPEHEIINLGGSETTQLRDLISGIAEAMD-IAPE-------IEQLPTQPGD 281 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D SK K + W P+ ++ GL K W Sbjct: 282 VERTYADISKAKRLLDWTPETPIDEGLQKFADW 314 >gi|1332595|emb|CAA66411.1| dNDP-glucose dehydratase [Streptomyces cyanogenus] Length = 164 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/175 (44%), Positives = 112/175 (64%), Gaps = 22/175 (12%) Query: 18 RYLVND-----LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEF 72 R L+ND V V+DKLTYAGN ++L E ++ +F+Q DICD E L E Sbjct: 5 RTLLNDGYEDWKGAHVTVLDKLTYAGNRDNLPERTRG--LTFVQGDICDFEL----LLEL 58 Query: 73 QP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ 130 P DA+V+FAAESHVDRS+ A+EF+ TN+ GT LL+ + L+ K R + Sbjct: 59 LPGHDAVVHFAAESHVDRSLESAEEFVHTNVTGTQRLLD------AVLATRVK---RVVH 109 Query: 131 ISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 +STDEVYGS+D+G ++E+ P P+SPYSA+KA+SD L ++ T+G+ + ++ CS Sbjct: 110 VSTDEVYGSIDEGSWTEEWPLAPNSPYSASKAASDLLARSYWRTHGLDLSITRCS 164 >gi|1332593|emb|CAA66413.1| dNDP-glucose dehydratase [Streptomyces cinnamonensis] Length = 165 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 11/158 (6%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 V V+D LTYAGN +L + +F+ DI R+ + + + DA+V+FAAESHVD Sbjct: 19 VTVLDSLTYAGNRMNLAPVETDPRLTFVHGDI--RDTALAGVAVVESDAVVHFAAESHVD 76 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 RSI GA +F++TN++GT LL+ + L + FL +STDEVYGS+ +G ++E Sbjct: 77 RSIDGAADFVSTNVLGTQTLLD------AALRHGGR---TFLHVSTDEVYGSVPEGSWTE 127 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 + P P+SPYSA+KASSD + LA+ T+G+ V ++ CS Sbjct: 128 EHPLAPNSPYSASKASSDLIALAYHRTHGLDVRVTRCS 165 >gi|325127161|gb|EGC50110.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis N1568] Length = 114 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/111 (54%), Positives = 83/111 (74%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 R + + +PDA+++ AAESHVDRSI A EFI TNI+GTF LLE R Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAAR 113 >gi|291279234|ref|YP_003496069.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans SSM1] gi|290753936|dbj|BAI80313.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans SSM1] Length = 323 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/337 (30%), Positives = 168/337 (49%), Gaps = 35/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M +++TG AGFIG + L+ND +V+ +D L ++ LKE ++ L F F Sbjct: 1 MNILLTGAAGFIGYFTAKKLLNDGH-KVIGVDNLNDYYDV-RLKEYRKNELLKNENFQFY 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI + + + + + DAI+N AA + V SI + TN GT LLE + + Sbjct: 59 KLDISNYDSLSVLFQNHKFDAIINLAARAGVRYSIENPFVYFETNSTGTLNLLELAKDYG 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 +F+ ST +Y + F+ED P N P SPY+A+K S++ + + Sbjct: 119 VN---------KFVLASTSSLYAGQEMP-FTEDKPVNTPISPYAASKKSAEVTAYTYHYF 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGI V + YGP P+ + I+++ + + +YGDG RD+ YVED Sbjct: 169 YGIDVSVVRYFTVYGPAGRPDMSVFRFISQIYKDEPIIVYGDGSQSRDFTYVEDIADGTV 228 Query: 235 LVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLD---ALIPKSYSHTELIRFIEDRPGH 290 LK+ IG E N+G NN K ID++ + LL +I K + +++ Sbjct: 229 KALKE--IGYEIINLGNNNPNKLIDMIKYVEELLGKKAKIINKDFHKADMM--------- 277 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +A D +K K +GW P+ ++++GL TV W+LDN Sbjct: 278 -ATWA-DITKAKELLGWEPKVDLKTGLENTVNWFLDN 312 >gi|323340976|ref|ZP_08081225.1| UDP-glucuronate 5'-epimerase [Lactobacillus ruminis ATCC 25644] gi|323091638|gb|EFZ34261.1| UDP-glucuronate 5'-epimerase [Lactobacillus ruminis ATCC 25644] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 31/347 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQS--NLFSFL 55 ++VTG GFIG+ L L++D+ I ++ ID + ++ L+EI N F+F+ Sbjct: 11 ILVTGATGFIGANLVLKLLHDVSCINIVGIDNMNDYYDVGIKEWRLEEIKTEAENNFTFI 70 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D+E + ++ PD +VN AA++ V SI D +I +N+IG + +LE R Sbjct: 71 KGDIADKEVVDKIFSQYHPDIVVNLAAQAGVRYSITNPDAYIRSNLIGFYNILEACR--H 128 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 S KK + + S+ VYG K FS +D NP S Y+ATK S++ + A+ Sbjct: 129 SGDDNGKKVE-HLVYASSSSVYGGNKKVPFSTDDKVDNPVSLYAATKKSNELMAHAYSKL 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YGP P+ ++++G + ++ G RD+ Y++D V +Y Sbjct: 188 YNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGETIKIFNYGNCKRDFTYIDDIVEGIY 247 Query: 235 LVL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SH 277 V+ K G G YNIGG +D V + L ++PK Y +H Sbjct: 248 RVMQGAPDQKNGEDGLPIPPYAVYNIGGGRPENLLDFVDILQQELLNAGVLPKDYDFEAH 307 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P ++ +GL WY Sbjct: 308 KELVPM---QPGDVPVTYADTTALERDYGYRPSVDLRTGLRNFAEWY 351 >gi|319789777|ref|YP_004151410.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans HB-1] gi|317114279|gb|ADU96769.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans HB-1] Length = 314 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 32/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L L++ + +V+V+D L+ G L++L + S+ F++ + Sbjct: 1 MSVLVTGGAGFIGSHLVEVLLSQGR-EVVVLDDLS-TGKLSNLPD---SSSLEFVKGSVT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R +EF ++ + AA + V RS+ N GT LL+ S +S+ Sbjct: 56 DEELVRRLFEEFNFSSVFHLAAVASVQRSVEEPLYCHRVNCDGTLYLLQ------SAVSR 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF+ S+ VYG L + E+MP +P +PY+ K +S+ V+ YG+ + Sbjct: 110 GVK---RFIFASSAAVYGDLPQLPKREEMPVSPLTPYAVDKYASERYVVNSFRLYGLEGV 166 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMI-----EGSHVFLYGDGQNVRDWLYVEDHVR 231 N +G P +I + I R+ E V ++GDG+ RD++YV+D V Sbjct: 167 ALRFFNVFGERQDPSSPYSGVISIFIDRVKRYLTGEPVTVDIFGDGRQTRDFIYVKDVVS 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 AL + ++G GE YN+G E ++++ I ++ L P+ IRF+ +RPG Sbjct: 227 ALLIAEERGVPGEVYNVGTGKETSLLELLDYIRDIVGTL-PE-------IRFLPERPGDI 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +R D SK++ ++G+ P+ +++ GL+ + L N Sbjct: 279 KRSVADISKLE-KLGFSPRFSVKEGLSNLIREVLIQN 314 >gi|146342050|ref|YP_001207098.1| putative NAD dependent epimerase/dehydratase family protein [Bradyrhizobium sp. ORS278] gi|146194856|emb|CAL78881.1| putative NAD dependent epimerase/dehydratase family protein [Bradyrhizobium sp. ORS278] Length = 339 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L +L++ + V V+D L+ G++++L E +++ ++ + D Sbjct: 4 RILVTGGAGFIGSHLVEHLLSSGYV-VTVLDDLS-TGSIDNLAEANETGRLRLIEGSVLD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +A+ Q D + + A + V +S+ E N GT +LE R Sbjct: 62 AQAVETAMH--QCDYVFHLAVQC-VRKSLGKPIENHEINATGTLRMLEAAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + RF+ S+ EVYGS+ GL ED P + Y A K + + A+ TYG+P ++ Sbjct: 110 KHNIKRFVYCSSSEVYGSVSTGLLDEDTLCRPVTVYGAAKLAGELYTDAYHQTYGLPTVV 169 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP ++IP R + G ++GDG N RD+ YV + R L L Sbjct: 170 VRPFNAYGPRAHERGDLAEVIPRFFIRCLNGLPPVIFGDGSNGRDFTYVTEVARGLALAC 229 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G +G + NI + IG + +I + + I I RPG R + Sbjct: 230 DADGLVGSKVNIAYGQ-------MISIGQVAAEVIKATGRNDLGIEHISGRPGDVRVLSA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +G+ + + GL + + W+ Sbjct: 283 DVSRARRLLGYRAEIDFAHGLRRYLDWF 310 >gi|83816365|ref|YP_444760.1| UDP-glucuronate 5'-epimerase [Salinibacter ruber DSM 13855] gi|83757759|gb|ABC45872.1| UDP-glucuronate 5'-epimerase [Salinibacter ruber DSM 13855] Length = 327 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 103/345 (29%), Positives = 166/345 (48%), Gaps = 32/345 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQ 56 M ++VTGGAGFIG+ LCR L+ + V+ ID A +++ + + FS ++ Sbjct: 1 MTVVVTGGAGFIGARLCRRLLK-VGHTVVAIDNFDPFYPRAMKEEGIEDFPRES-FSLVE 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWW 115 DIC+ + AL DA+++ AA++ V SI + N+ GT +LE RL Sbjct: 59 TDICNTGTVLQALHARDVDAVIHLAAKAGVRPSIESPGAYEQANVAGTQSMLEVAQRLGV 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT 174 FL S+ VYG+ +K FSE+ P +P SPY+ATK S + L + H Sbjct: 119 DT----------FLFGSSSSVYGNNEKVPFSEEDPVRHPISPYAATKRSGELLAHTFHHL 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y + V YGP P+ I +++ + +YGDG + RD+ YV+D V + Sbjct: 169 YDMTVHCLRFFTVYGPRQRPDLAIHKFARQLLTDQPITMYGDGTSSRDYTYVDDIVDGVM 228 Query: 235 LVLKKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L + + E N+GG+ + D++ I DA+ T I+ + ++PG Sbjct: 229 RSLHRAKSLEAPEYEIINLGGSETTQLKDLISGIA---DAM-----GITPEIKQLPEQPG 280 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 R D SK + +G+ P ++ GL K V W ++ + RP+ Sbjct: 281 DVERTYADISKAEELLGYEPDTPIQVGLQKFVSW-VEAYYADRPV 324 >gi|78776380|ref|YP_392695.1| NAD-dependent epimerase/dehydratase [Sulfurimonas denitrificans DSM 1251] gi|78496920|gb|ABB43460.1| NAD-dependent epimerase/dehydratase [Sulfurimonas denitrificans DSM 1251] Length = 329 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 19/326 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDK-LTYAGNLNSLKEISQSNLFSFLQVD 58 M+ +V G F G + YL+ N+ ++ I + Y +L + K + N F Q+D Sbjct: 1 MKYLVLGSNSFSGGSFINYLLDNEEDAKIFAISRSAEYHDSLLAYKNNPKQNRVKFFQLD 60 Query: 59 IC-DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I D + I + + + D I+NFAA+ V +S E+ TN + LL++ +S Sbjct: 61 INNDSQNISDLIFDNKIDYIINFAAQGMVAQSWDAPLEWFNTNTLSLVALLDKI-YKFSF 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + +F+Q+ST EVYGS + E M PSSPY+A+KAS+D ++ ++ T+G Sbjct: 120 IK-------KFVQVSTPEVYGSCNN--IKESMALLPSSPYAASKASADLILYSYFKTHGF 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+ + SN YG Y ++IP I + + + L+G G+ VR +++++D +A + Sbjct: 171 PINYTRASNVYGAYQQLYRIIPKTILMIKKNQKLQLHGGGKAVRSFIHIDDVCKATLKIA 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+ + GE Y++ + K I I + + + L + E I +++R D Y ++ Sbjct: 231 KEAKSGEIYHLS---DTKTISIYDLVNLICNKL---GKNILEQIELVQERTSEDNLYLMN 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 + K+ E P + G++ V W Sbjct: 285 NEKLLREFNLTPHVKLSDGIDDVVRW 310 >gi|259414802|ref|ZP_05738725.1| dTDP-glucose 4,6-dehydratase [Silicibacter sp. TrichCH4B] gi|259349253|gb|EEW61000.1| dTDP-glucose 4,6-dehydratase [Silicibacter sp. TrichCH4B] Length = 148 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/140 (47%), Positives = 91/140 (65%), Gaps = 3/140 (2%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGSA+ R + +V+ +D LTYA L+++ +++S ++F Q DI Sbjct: 1 MKILVTGGAGFIGSAVVRQAIA-AGHEVVNLDALTYAACLDNVASVAESPRYAFEQADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + PDA+++ AAESHVDRSI G +FI TN+ GTF +LE R +W + Sbjct: 60 DRAVLDRIFALHAPDAVMHLAAESHVDRSIDGPGDFIETNVTGTFNMLEAARKFWVAVG- 118 Query: 121 DKKDQFRFLQISTDEVYGSL 140 K FRF ISTDEVYGSL Sbjct: 119 -KPADFRFHHISTDEVYGSL 137 >gi|199599730|ref|ZP_03213081.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] gi|199589375|gb|EDY97530.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] Length = 126 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV 211 NPSSPYS+TKA+SD LV AW ++G+ +SNCSNNYGPY EK IP IT ++ G Sbjct: 1 NPSSPYSSTKAASDMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKP 60 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 LYG G+NVRDW++ DH A++ +L KG+IGE Y IG N E+ N ++ Sbjct: 61 KLYGTGKNVRDWIHTNDHSSAIWDILTKGKIGETYLIGANGEQDNKTVL 109 >gi|148256914|ref|YP_001241499.1| putative dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] gi|146409087|gb|ABQ37593.1| putative dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] Length = 332 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 137/251 (54%), Gaps = 15/251 (5%) Query: 73 QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQIS 132 +P +VNFAA+S V S L D ++ TN++ L + R + D D R++ ++ Sbjct: 78 RPTHVVNFAAQSMVGESWLYPDHWMMTNVVSAVRLHDILRNY------DGLD--RYVHVT 129 Query: 133 TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYH 192 T EVYGS + G ED +NPS+PY+ ++A+ D + + Y PV+ + +N YGP Sbjct: 130 TPEVYGSTE-GWVREDAAFNPSTPYAVSRAAGDMSLRTYFANYQFPVVFTRAANVYGPGQ 188 Query: 193 FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNN 252 +++P I + G + L G G++VR ++++ D A + + G++GE Y+I G Sbjct: 189 QLYRIVPRTIVAAMTGQKLRLDGGGKSVRVFIHMTDVSDATVKIGRSGKLGETYHISG-Y 247 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 E +I + E ++ A + KS+ + + +RPG D Y +DS K+++E+GW + Sbjct: 248 ELVSIRTLVE---MILARLGKSFE--DCVEIGPERPGKDTAYTLDSFKLRTELGWRDTYS 302 Query: 313 MESGLNKTVCW 323 +E G++ + W Sbjct: 303 LEQGIDDVIAW 313 >gi|261868356|ref|YP_003256278.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D11S-1] gi|1944177|dbj|BAA19651.1| unnamed protein product [Aggregatibacter actinomycetemcomitans] gi|261413688|gb|ACX83059.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 180 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 86/128 (67%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGSAL R+L+ + ++ +DKLTYAGNL +L + + F Q DIC Sbjct: 1 MQFLITGGAGFIGSALIRWLIQHTEHDIINVDKLTYAGNLCALYSVETHPRYHFEQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L +++PDA+++ AAESHVDRSI F+ TNIIGT+ LLE R ++ L+ Sbjct: 61 DGQMMAHILSQYRPDAVIHLAAESHVDRSIDAPAAFMQTNIIGTYTLLEAARNYYEKLTA 120 Query: 121 DKKDQFRF 128 +KK F F Sbjct: 121 EKKRNFVF 128 >gi|5545329|dbj|BAA82544.1| ORF18 [Actinobacillus actinomycetemcomitans] Length = 180 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 60/128 (46%), Positives = 86/128 (67%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGSAL R+L+ + ++ +DKLTYAGNL +L + + F Q DIC Sbjct: 1 MQFLITGGAGFIGSALIRWLIQHTEHDIINVDKLTYAGNLCALYSVEPHPRYHFEQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L +++PDA+++ AAESHVDRSI F+ TNIIGT+ LLE R ++ L+ Sbjct: 61 DGQMMAHILSQYRPDAVIHLAAESHVDRSIDAPAAFMQTNIIGTYTLLEAARNYYEKLTA 120 Query: 121 DKKDQFRF 128 +KK F F Sbjct: 121 EKKRNFVF 128 >gi|304406121|ref|ZP_07387778.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] gi|304344705|gb|EFM10542.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] Length = 728 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 158/330 (47%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGG GFIGS + Q+ +ID L+ G++N++ + +++ Sbjct: 1 MKILITGGCGFIGSTAAERFHKEGH-QIYIIDNLS-GGDVNNV-----TVPHKLYPLNVE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR C + +PD +V+ AA+ V S+ TNI+G +LE +R Sbjct: 54 DRAC-DVVFESVRPDVVVHLAAQVDVTTSMKIPQADAQTNIMGLVNMLECSR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +FL S+ VYG+ + +E + P SPY K +Y W YG+ L Sbjct: 105 -RHGVKKFLFASSAAVYGNDEAVPLAEAVQGEPVSPYGINKKLGEYYCAKWQELYGLQTL 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP ++ + + RM+E + +YGDG RD++YVED V LY Sbjct: 164 AFRFANVYGPKQGGTGEGGVVSIYMKRMVEQQELVVYGDGNQTRDFIYVEDIVDGLYRGA 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G YN+ N+E + L+DAL + + +R+ R G R ++D Sbjct: 224 ESDLTG-VYNLSCNHE-------IRLNELIDAL--QELGDSINVRYEASREGDIYRSSLD 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++++K ++ W P +++ GL KT W+L N Sbjct: 274 NTRVKRDLDWVPLFSLKEGLAKTYSWFLAN 303 >gi|86750919|ref|YP_487415.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gi|86573947|gb|ABD08504.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 345 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 162/324 (50%), Gaps = 19/324 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI-C 60 +++V G F G+ + R L+ D +V+ + + + + F F Q+D+ Sbjct: 20 KVLVIGSNSFTGAEMVRDLL-DHGAEVVGVSRSPEPHQAFLPYRWTNTERFRFRQLDLNH 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + ++ + I+NFAA+S V S L D + TN++ T L E R C Sbjct: 79 DLDALMALIEAERCPWIINFAAQSMVGESWLNPDHWFMTNVVSTVRLHERLR---HCDFL 135 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D R++ ++T EVYG+ G +E+ P++PS+PY+ ++A+ D + ++ Y PVL Sbjct: 136 D-----RYVHVTTPEVYGNA-TGTLTEEAPFDPSTPYAVSRAAGDMSLRSYFRAYQFPVL 189 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP +++P I + G + L+G G + R ++ D A + G Sbjct: 190 YTRAANVYGPGQRLYRIVPRTILFIRLGRKLQLHGGGTSERSFIAASDVADATRRIAAAG 249 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDRRYAIDSS 299 +G+ Y+I + I + E+ L+ A + + H E+ + +R G D Y +DS Sbjct: 250 TLGDTYHIATD----RIVTIRELVELICATMGVKFEDHVEI---VGERLGKDSAYRLDSG 302 Query: 300 KIKSEIGWFPQENMESGLNKTVCW 323 KI+ E+GW + +E G++ T+ W Sbjct: 303 KIRRELGWSDRVTLEQGIDDTIRW 326 >gi|163943516|ref|YP_001642745.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] gi|163865713|gb|ABY46770.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] Length = 317 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 102/328 (31%), Positives = 163/328 (49%), Gaps = 36/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIGS LC+ L+ + V+ ID GN+ SL+ S+ F Sbjct: 1 MKILVTGAAGFIGSHLCQALLKNSAYHVVGIDHFIGPTPATLKTGNIQSLELNSR---FQ 57 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEET 111 F++ DI + + + L++ D + + AA V R+ G D ++T NI+ T LLE Sbjct: 58 FIREDILNTD-LSKLLQDI--DVVYHLAAIPGV-RTSWGKDFQPYVTNNIMVTQQLLEAC 113 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + K D +F+ IST VYG G SED+ P SPY TK S ++L + Sbjct: 114 K-------HIKLD--KFIHISTSSVYGE-KSGAVSEDLLPIPLSPYGVTKLSGEHLCHVY 163 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + IP+++ YGP P+ I +M+E + ++GDG RD+ Y++D +R Sbjct: 164 HKNFHIPIVILRYFTVYGPRQRPDMAFHRLIKQMLEDKPLTIFGDGTQTRDFTYIDDCIR 223 Query: 232 ALYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L KK IGE NIGG + +DI+ +L+ ++ KS + F++ PG Sbjct: 224 GTVAALETKKNIIGEVINIGGKEQASILDII----SMLEKILGKSATK----NFLKSVPG 275 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGL 317 ++ D SK + + + P ++ GL Sbjct: 276 EPKQTWADISKASTLLQYSPIVSLSDGL 303 >gi|20094161|ref|NP_614008.1| nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] gi|19887177|gb|AAM01938.1| Nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] Length = 309 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 27/325 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + LV D V+V+D + G +L+E+ ++ D+ D Sbjct: 2 ILVTGGAGFIGSHVVEELV-DRGHDVVVLDNFS-VGCEENLREVRDD--IEIVRADVTDP 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +E++P+A+++ AA+ +V S+ N +GT L+ S ++ Sbjct: 58 RAVERTFREYRPEAVIHLAAQVNVRYSMESPFVDARINALGTLNLV-------SLAAEHD 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 ++F + S VYG + E+ P P S Y +K + +Y V + G ++ Sbjct: 111 VERFVYAS-SGGAVYGEPEYLPVDEEHPTRPISNYGVSKLAGEYYVRVYAERDGFEYVIL 169 Query: 183 NCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +N YGP P +IP+ + R G + ++GDG+ RD+++VED R +++ Sbjct: 170 RYANVYGPRQDPRGEAGVIPIFLLRAARGEPLTIFGDGEQTRDFVFVEDVARVTAEAVER 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDRRYAIDS 298 G YNIG E DIV + K+ + ++ ED RPG RR +D Sbjct: 230 G--DGVYNIGTGRETSVNDIVNAV---------KAVTGVDVEVVYEDPRPGEVRRIYLDP 278 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 S+ + E+G+ P+ ++E G+ +T W Sbjct: 279 SRAREELGFEPRVDLEEGIERTWEW 303 >gi|14591500|ref|NP_143580.1| UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] gi|3258173|dbj|BAA30856.1| 306aa long hypothetical UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] Length = 306 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 165/330 (50%), Gaps = 42/330 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L ++ V++ID L Y+G + ++ E + F++ D+ D Sbjct: 6 IVITGGAGFIGSHLAEALKDEN--DVIIIDNL-YSGRIENIPEGVK-----FIRADVRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 E I + E D + + AA+ V SI D T N+IGT +L LSQ Sbjct: 58 ESIAEVISE--ADYVFHEAAQISVKESI--EDPVFTEEVNVIGTINVLR-------ALSQ 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG + +ED NP SPY TK ++++ + YGIPV+ Sbjct: 107 GDG---KLIFASSAAVYGEPKELPITEDTLTNPISPYGITKLAAEHYCRVYQSLYGIPVV 163 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +I + + R I+G + ++GDG+ RD++YV+D V A LV K Sbjct: 164 ILRYFNVYGPRQSSAYAGVISIFLERAIKGEPLIIFGDGKQTRDFIYVKDVVEANILVAK 223 Query: 239 K----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 K GRI +N+ E +++ +I +D S + I F RPG RR Sbjct: 224 KRSANGRI---FNVATGKETTILELAMKI---IDMT-----SSSSSILFYPPRPGDIRRS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +IK ++G+ P+ ++E GL +T W+ Sbjct: 273 VAKIERIK-KLGFKPRYSLEEGLKETFKWF 301 >gi|213419657|ref|ZP_03352723.1| dTDP-glucose 4,6 dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 56/98 (57%), Positives = 74/98 (75%) Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L++V+ +G+ GE YNIGG+NE+KN+D+VF I LLD ++PK+ S+ E I ++ DRPGHDR Sbjct: 1 LHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDR 60 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 RYAID+ KI E+GW P E ESG+ KTV WYL N W Sbjct: 61 RYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW 98 >gi|158312817|ref|YP_001505325.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158108222|gb|ABW10419.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 330 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 157/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS + ++ D V+ ID L+ +G + +L + + FSF + DI Sbjct: 1 MRILVTGAAGFIGSTVVDRMLADGH-SVVGIDDLS-SGRMENLTQAATDARFSFEKGDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCL 118 + + + +PDA+ + AA+ +D I AD + N++GT +LE R Sbjct: 59 SPD-LGDFVARVRPDAVAHLAAQ--IDVRISVADPLLDARLNVLGTINVLEAAR------ 109 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ +YG+ E +P P SPY+A KA+ + + + TYG+ Sbjct: 110 ---AAGVVKVIHTSSGGSIYGTPAALPVDESVPPAPESPYAAGKAAGELYLNVYRVTYGV 166 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P ++ + T ++EG ++GDG RD+++V D A Sbjct: 167 ATTALALGNVYGPRQDPHGEAGVVAIFGTALLEGRPTKIFGDGATSRDYVFVGDVADAFA 226 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 V + G R NIG E +D L + I + + +F RPG +R Sbjct: 227 RCVPAQAANGLRINIGTGAETTVLD--------LHSRIARVVGVPDEPQFAPPRPGELQR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++D + EIGW P+ +++ GL +TV W Sbjct: 279 ISLDVGLAEREIGWRPRMDLDGGLTRTVDW 308 >gi|218960972|ref|YP_001740747.1| NAD-dependent epimerase/dehydratase family protein [Candidatus Cloacamonas acidaminovorans] gi|167729629|emb|CAO80541.1| NAD-dependent epimerase/dehydratase family protein [Candidatus Cloacamonas acidaminovorans] Length = 325 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 159/335 (47%), Gaps = 33/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+++VTG GFIGS L L+ + K++ L + Y G L++I S+ + D Sbjct: 1 MKVLVTGADGFIGSHLTEALLKEGYKVRALSQYNSFNYWG---WLEDIKPSSGLEIVCGD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D R K+ D I + AA + S + + +I TN+ GT + C Sbjct: 58 VRDPNFCREISKDI--DVIFHLAALIAIPYSYIAPESYIETNVKGTLNI---------CQ 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R L ST EVYG+ E P P SPYSA+K +D + +++ +++ +P Sbjct: 107 AAKDNGVKRILVTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIGADAIAMSFYNSFKLP 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + N YGP +IP IT++ G GD RD+ YVED R L+++ Sbjct: 167 LTIVRPFNTYGPRQSARAVIPTIITQIASGVKEIKLGDASPTRDFNYVEDICRGFILLVQ 226 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRR 293 + IGE NIG N +EI + K H++ ++ I D RP Sbjct: 227 CDKAIGETVNIGSN---------YEISIKETFELIKDIMHSD-VKLITDEQRIRPEKSEV 276 Query: 294 YAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + D+ KIK+ G+ P+ +++ GL KTV W+++ Sbjct: 277 FRLWCDNRKIKALTGYEPKYSIKEGLEKTVEWFIN 311 >gi|1359482|emb|CAA66455.1| dNDP-glucose dehydratase [Amycolatopsis mediterranei] Length = 166 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 11/158 (6%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 V+V+DKLTYAGN +L ++ F++ DICD + ++ D +V+FAAESHVD Sbjct: 20 VVVLDKLTYAGNEANLAPVAADPRLEFVRGDICDTALVADVMRGV--DLVVHFAAESHVD 77 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 RSI GA +F+ TN++GT LL+ + + + +STDEVYGS++ G ++E Sbjct: 78 RSIPGAADFVLTNVLGTQNLLQAAL---------EAGVGKVVHVSTDEVYGSIEHGSWTE 128 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 D P+SPYSA+KASSD + ++ T+G+PV ++ CS Sbjct: 129 DHVLEPNSPYSASKASSDLVARSFFRTHGLPVCVTRCS 166 >gi|227487231|ref|ZP_03917547.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541600|ref|ZP_03971649.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092889|gb|EEI28201.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182568|gb|EEI63540.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51866] Length = 307 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 161/329 (48%), Gaps = 31/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 MR +VTGGAGFIGS L LV++ + +V+D L++ N+ + + +++L L++D Sbjct: 1 MRALVTGGAGFIGSHLVELLVSEGH-EPVVVDNLSHGKRENVPAGVPLVEADL---LKID 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E+ P+ + + AA+ V +S+ TNI+ T L E R Sbjct: 57 VDE------LFDEYAPEVVFHLAAQIDVRKSVASPIFDAQTNILTTIRLAEAAR------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S D + + F S +YG+ + SE+ P +P S Y+A+K S + + + H YG+ Sbjct: 105 SHDVR-KIVFTS-SGGAIYGAPTQFPVSEETPVDPHSQYAASKVSGEIYLNTYRHLYGLE 162 Query: 179 VLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +N YGP P ++ + ++ G ++G G N RD++YV D RA YL Sbjct: 163 CSHIAPANVYGPRQDPYGEAGVVAIFSQHLLNGLPTKVFGSGSNTRDYVYVGDVARAFYL 222 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 G R+NIG E + D L +L+ + T+ F R G R + Sbjct: 223 ASGNKGGGMRFNIGTGVETSDRD--------LHSLVAAAAGATDDPEFAPARLGDLERSS 274 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +DS++ + +GW PQ ++ G+ KTV ++ Sbjct: 275 LDSTRAREVLGWEPQVTLKEGIAKTVEYF 303 >gi|14520521|ref|NP_125996.1| UDP-glucose 4-epimerase [Pyrococcus abyssi GE5] gi|5457737|emb|CAB49227.1| galE-1 UDP-glucose 4-epimerase) [Pyrococcus abyssi GE5] Length = 307 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 36/327 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L + V+VID L Y+G ++ E + F++ D+ D Sbjct: 6 IVVTGGAGFIGSHIAEALKEEN--DVVVIDNL-YSGKPENVPEGVK-----FIEADVRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 E I + D + + AA+ V+ S+ D T N+IGT +L LS+ Sbjct: 58 ESIAEIVS--SADYVFHEAAQISVEESV--KDPVFTEEVNVIGTINILR-------ALSE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG ED P NP SPY +K S ++ + YG+P + Sbjct: 107 GNG---KLIFASSAAVYGEPTSLPIREDHPLNPISPYGVSKVSGEHYCKVFYQLYGVPTV 163 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +I + + R + G + ++GDG+ RD++YV+D V A LV + Sbjct: 164 ILRYFNVYGPRQSSAYAGVISIFMERALRGEPLVIFGDGKQSRDFVYVKDVVEANILVAE 223 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K R GE +N+G E I++ +I L S + I F + RPG RR D Sbjct: 224 KRRAEGETFNVGTGRETTIIELAMKIIEL--------SSTSSQILFSKPRPGDIRRSVAD 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 KIK ++G+ P+ ++E GL +T W+ Sbjct: 276 IEKIK-KLGFKPRYSLEEGLLETWKWF 301 >gi|110668589|ref|YP_658400.1| nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626336|emb|CAJ52794.1| nucleoside-diphosphate-sugar epimerase 1 (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 328 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 98/345 (28%), Positives = 151/345 (43%), Gaps = 32/345 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE----------ISQSN 50 M ++VTGGAGFIG L V + V +D L +L LKE Sbjct: 1 MHILVTGGAGFIGGHLAESFV-EAAHDVTTVDILEPFYDLG-LKEHNIDVARQRATETDG 58 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 + F++ ++E + +++ D I + AA++ V S+ + N+ G+ +LE Sbjct: 59 SYEFIEGSTTNKELVDEIVEDI--DIIYHQAAQAGVRASVENPTKVTEYNVNGSQTILEA 116 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R K D R + S+ VYG + + E P P SPY A+K + ++ + Sbjct: 117 AR---------KHDVTRVVNASSSSVYGKPEYLPYDESHPNEPVSPYGASKLAVEHYMRV 167 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + YG+P + YGP P I ++R + G +YGDG RD+ Y+ D V Sbjct: 168 YNEVYGLPTVSLRYFTVYGPRMRPNMAISNFVSRCMRGKSPEVYGDGTQTRDFTYIADIV 227 Query: 231 RALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A + +L GE NIG ++ NIDI + D + P T I + E R G Sbjct: 228 DANHSLLTDDSADGETMNIGSSD---NIDITTLAEVVRDEIDP-----TLNIEYTEARDG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D SK IG+ P + G+ + + WY DN W+ PL Sbjct: 280 DAEHTHADISKATELIGYEPSREIREGVGEFIEWYEDNREWYEPL 324 >gi|328948389|ref|YP_004365726.1| UDP-glucuronate 4-epimerase [Treponema succinifaciens DSM 2489] gi|328448713|gb|AEB14429.1| UDP-glucuronate 4-epimerase [Treponema succinifaciens DSM 2489] Length = 340 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 167/337 (49%), Gaps = 27/337 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNSLKEISQSNL---FSFLQ 56 + VTG AGFIGS LC+ L+ ++ I+++ ID +T Y +L + S+L F+F++ Sbjct: 11 IFVTGAAGFIGSFLCKNLLENVSGIKIIGIDCITDYYDVSLKQERLDMLSSLKKDFTFVK 70 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D+ + S +++ P +VN AA++ V SI D +I +N+IG + +LE Sbjct: 71 GDIADKSLLDSLFEKYNPAVVVNLAAQAGVRYSIDNPDAYIHSNMIGFYNILE------- 123 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + + F S+ VYGS K +S ED NP S Y+ATK S++ A+ Y Sbjct: 124 CCRHNPVEHLVF--ASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELFAHAYSKLY 181 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + +Y +G RD+ YV+D V+ + Sbjct: 182 KIPCTGLRFFTVYGPMGRPDMAYFKFTNKLVKGEPIQIYNNGDMYRDFTYVDDIVKGVRA 241 Query: 236 VLKK-------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDR 287 V++K G + + YNIG N R + F + L + LI ++ S + + Sbjct: 242 VMQKTPEATDDGALYKIYNIG--NSRPESLMRF-VEILENCLIKENIISEQGKKELLPMQ 298 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG + D S ++ + G+ P +E GL WY Sbjct: 299 PGDVYQTFADVSDLEKDFGFKPATTLEQGLGAFAKWY 335 >gi|1332601|emb|CAA66414.1| dNDP-glucose dehydratase [Streptomyces fradiae] Length = 164 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 13/159 (8%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 +V +DKLTYAGN N+L + F++ D+CDR +R L DA+V+FAAESHV Sbjct: 19 RVTALDKLTYAGNRNNLP--PSNPRLEFVRGDVCDRALLRELLPGH--DAVVHFAAESHV 74 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS 146 DRS+ GA EF TN++GT LL+ + L + R + +STDEVYGS+++G ++ Sbjct: 75 DRSLEGAGEFFRTNVLGTQTLLD------AVLDSGVE---RVVHVSTDEVYGSIEQGSWT 125 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 ED P P+SPY+A+KA SD + A+ T+G+ + ++ CS Sbjct: 126 EDWPLQPNSPYAASKACSDLVARAYWRTHGVDLSITRCS 164 >gi|111225353|ref|YP_716147.1| putative UDP-glucose 4-epimerase [Frankia alni ACN14a] gi|111152885|emb|CAJ64633.1| putative UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) [Frankia alni ACN14a] Length = 317 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 25/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS + L+ D V+ +D L+ AG L +L + FSF Q+D+ Sbjct: 1 MRILVTGAAGFIGSTVTDRLLADGH-SVVGVDDLS-AGRLANLTAAAADPRFSFEQLDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + + +PD + + AA+ V S+ N++GT +LE RL + Sbjct: 59 SPE-LHALADRVRPDVVAHLAAQIDVRVSVADPLRDARQNVLGTINVLEAGRLAGAS--- 114 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YGS + E P P SPY+A KA+ + + + T+G+ Sbjct: 115 ------KVIHTSSGGSIYGSPARLPVDETAPVAPESPYAAGKAAGELYLNVYRATHGLAS 168 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + T M+ G ++GDG RD+++V D A V Sbjct: 169 TALALANVYGPRQDPHGEAGVVAIFGTAMLAGRQAKIFGDGTASRDYVFVGDVAEAFVRV 228 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L G R NIG E D+ I ++ +P + RPG R A Sbjct: 229 LPVDAAAGARLNIGTGVETSVRDLHSRIAAIVG--VPDTPLRAPA------RPGELARIA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + +GW P+ +++ GL +TV W Sbjct: 281 LAVHLAERLVGWRPRVDLDEGLARTVAW 308 >gi|308752250|gb|ADO45733.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus TK-6] Length = 325 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 103/335 (30%), Positives = 162/335 (48%), Gaps = 28/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +VTG AGFIG + L+ IQ++ +D L Y L + L + + F+F Q+D Sbjct: 7 FLVTGCAGFIGWKVSEKLLEK-GIQIVGVDNLNDYYDVKLKNYRLNLLKKYKNFTFYQLD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D +R K DA++N AA + V S+ +++TN +GT LLE C Sbjct: 66 IEDFCSLREVFKAHSFDAVINEAARAGVRYSMENPFIYMSTNAMGTLNLLE------LCK 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 K +FL ST +Y F E++P N P SPY+A+K S++ + + + YGI Sbjct: 120 EFGVK---KFLLASTSSLYAGQSMP-FKEELPVNFPISPYAASKKSAEVIAYTYHYLYGI 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 VL+ YGP P+ + I ++EG + ++GDG RD+ Y++D L L Sbjct: 176 DVLIVRYFTVYGPAGRPDMSVFRFIKWVLEGKPLEIFGDGTQSRDFTYIDDIAEGTLLAL 235 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG E +N+G NN ++ ++++ LI K + + E R Sbjct: 236 NSKGY--EIFNLGNNNPH-------QLSYVIE-LIEKYTGKKAKVEYREFHKADMRATWA 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D K + +GW P+ ++E G+ +TV W L NW W Sbjct: 286 DIEKAQKMLGWKPKVSLEEGIKRTVEWTL-KNWDW 319 >gi|46114412|ref|XP_383224.1| hypothetical protein FG03048.1 [Gibberella zeae PH-1] Length = 332 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 37/339 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNLFSFLQ---- 56 ++VTGGAGFIGS L L+ D +V+VID N + EI ++NL LQ Sbjct: 16 ILVTGGAGFIGSHLVEALLADGYWKVVVID------NFDEFYSPEIKRANLAGLLQHPNL 69 Query: 57 ----VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI D + + + +V+ AA + V S+ D + N+ GT LL+ Sbjct: 70 TVYEADIRDIPALTAIFADNDFSVVVHLAARAGVLPSLQVPDLYFDVNVTGTMNLLQ--- 126 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAW 171 C QF F S+ VYG K FSE P SPY+A+K++ + L W Sbjct: 127 ----CCKDFGVKQFVFG--SSSSVYGLGAKAPFSESQKTTQPISPYAASKSAGELLCHTW 180 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 H Y I + YGP P+ I TR+I +G + L+GDG ++RD+ Y++D + Sbjct: 181 SHLYQIRCVCLRFFTVYGPRQRPDLAIH-KFTRLIHQGKPIPLFGDGSSIRDYTYIDDII 239 Query: 231 RALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ + +G + E N+G + ID++ + I + LI + ++PG Sbjct: 240 DGIFGAIDYEGSMFEAINLGESQTITLIDLI--------SAIEGTLGRKALIDWRGEQPG 291 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D SK S IG+ P+ ++ G+ K V WYL++N Sbjct: 292 DMPLTYADISKAGSIIGYKPKTQVQQGIVKFVAWYLNHN 330 >gi|3132268|dbj|BAA28145.1| unnamed protein product [Actinobacillus actinomycetemcomitans] Length = 180 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/128 (46%), Positives = 85/128 (66%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGSAL R+L+ + ++ +DKL YAGNL +L + + F Q DIC Sbjct: 1 MQFLITGGAGFIGSALIRWLIQHTEHDIINVDKLPYAGNLCALYSVETHPRYHFEQTDIC 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L +++PDA+++ AAESHVDRSI F+ TNIIGT+ LLE R ++ L+ Sbjct: 61 DGQMMAHILSQYRPDAVIHLAAESHVDRSIDAPAAFMQTNIIGTYTLLEAARNYYEKLTA 120 Query: 121 DKKDQFRF 128 +KK F F Sbjct: 121 EKKRNFVF 128 >gi|288818661|ref|YP_003433009.1| nucleotide sugar epimerase [Hydrogenobacter thermophilus TK-6] gi|288788061|dbj|BAI69808.1| nucleotide sugar epimerase [Hydrogenobacter thermophilus TK-6] Length = 322 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 103/335 (30%), Positives = 162/335 (48%), Gaps = 28/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +VTG AGFIG + L+ IQ++ +D L Y L + L + + F+F Q+D Sbjct: 4 FLVTGCAGFIGWKVSEKLLEK-GIQIVGVDNLNDYYDVKLKNYRLNLLKKYKNFTFYQLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D +R K DA++N AA + V S+ +++TN +GT LLE C Sbjct: 63 IEDFCSLREVFKAHSFDAVINEAARAGVRYSMENPFIYMSTNAMGTLNLLE------LCK 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 K +FL ST +Y F E++P N P SPY+A+K S++ + + + YGI Sbjct: 117 EFGVK---KFLLASTSSLYAGQSMP-FKEELPVNFPISPYAASKKSAEVIAYTYHYLYGI 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 VL+ YGP P+ + I ++EG + ++GDG RD+ Y++D L L Sbjct: 173 DVLIVRYFTVYGPAGRPDMSVFRFIKWVLEGKPLEIFGDGTQSRDFTYIDDIAEGTLLAL 232 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG E +N+G NN ++ ++++ LI K + + E R Sbjct: 233 NSKGY--EIFNLGNNNPH-------QLSYVIE-LIEKYTGKKAKVEYREFHKADMRATWA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D K + +GW P+ ++E G+ +TV W L NW W Sbjct: 283 DIEKAQKMLGWKPKVSLEEGIKRTVEWTL-KNWDW 316 >gi|332971740|gb|EGK10688.1| UDP-glucose 4-epimerase [Desmospora sp. 8437] Length = 328 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 31/328 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ Q +V+D NL++ +E F ++DI Sbjct: 25 MKVLVTGGAGFIGSHIVDQLLEKGH-QAVVVD------NLSTGEEEYLRPDLPFYRMDIQ 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I + E QPDA+++ AA+S V RSI TNI+GT LLE R Sbjct: 78 D-EGIDRVIGEEQPDAVIHQAAQSQVTRSIEDPLGDARTNILGTIRLLESCR-------- 128 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + S+ +YG+ E P +P SPY +K + + + A+ +G+ Sbjct: 129 -RHGVAKIIYASSAAIYGNPQYLPIDEQHPLSPLSPYGISKGTPEEYIRAYHSLHGLSFT 187 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P +I + I R++ + ++GDG+ RD++YVED RA L Sbjct: 188 IFRYANVYGIRQVPHGEGAVISIFIDRLLRDLPLTIHGDGEQTRDYIYVEDVARANVAAL 247 Query: 238 KKGRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G GE N+G G N N D+V + K + + +RPG + Sbjct: 248 ARGD-GETLNLGTGVNTSLN-DLV--------KTMEKISGRKLEVNYGPNRPGDIKYSYF 297 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++KS + W P ++E+GL +T+ +Y Sbjct: 298 NIDRVKSVLNWDPITDLETGLTRTLDFY 325 >gi|315637921|ref|ZP_07893107.1| dTDP-glucose 4,6-dehydratase [Campylobacter upsaliensis JV21] gi|315481956|gb|EFU72574.1| dTDP-glucose 4,6-dehydratase [Campylobacter upsaliensis JV21] Length = 323 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 24/330 (7%) Query: 2 RLIVTGGAGFIGSALCRYL-VNDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TG GFIGS LC L +I+ L + + + G+L L+ + +L + D+ Sbjct: 3 RVLITGADGFIGSHLCEVLNAKGYEIKALSLYNSFNFWGHLEHLE--CREDL-EIVSGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D S +K DA+++ A + S ++ TNI GT LLE ++ Sbjct: 60 RDSFFCDSLVKGV--DAVLHLGALIAIPYSYTAPQSYVDTNIQGTLNLLEASK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ ST EVYGS E P P SPYSA+K +D L L++ +++ +PV Sbjct: 111 --RHGVKRFIHTSTSEVYGSAIYTPIDEKHPLQPQSPYSASKIGADMLALSYFYSFNLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ N YGP IP + +++ G GD RD +V D +L Sbjct: 169 IVARPFNAYGPRQSARAFIPAMMVQILSGVRELKVGDLSTKRDLNFVLDTCEGFAALLSN 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 G GE YNIG E +++ I L + S T L RP + R D Sbjct: 229 GEFGEVYNIGSGVEYTMSEVLELICKLSGVELKISQDETRL------RPKNSEVTRLLCD 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SSK+KS W Q +++ GL +T+ + N Sbjct: 283 SSKLKSVSAWRSQISLKEGLEQTLAYVKAN 312 >gi|305679867|ref|ZP_07402677.1| RmlD substrate binding domain protein [Corynebacterium matruchotii ATCC 14266] gi|305660487|gb|EFM49984.1| RmlD substrate binding domain protein [Corynebacterium matruchotii ATCC 14266] Length = 315 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 26/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L +LV V V D L+ G +++L + D+ Sbjct: 1 MHVLVTGGAGFIGSHLVDFLVAHGH-SVTVFDNLSR-GKMSNLDNALACGNVRVITEDLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + QP+ I + AA+ V RS+ TNII T L E R Sbjct: 59 DSD-LEQLIVDTQPEVIFHLAAQIDVRRSVAEPLFDAHTNIISTIRLAEAAR-------- 109 Query: 121 DKKDQFRFLQISTD--EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ R + ++ +YG ++ +E+ P +P SPY+A K S + + + H YG+ Sbjct: 110 --KNNVRKIVFTSSGGSIYGKPEQFPVTENTPIDPHSPYAAAKISGEIYLNTFRHLYGLD 167 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +N YGP P ++ + R++ G ++GDG N RD++YVED VRA YL Sbjct: 168 CSHIAPANVYGPRQDPHGEAGVVAIFAQRLLNGYPTTIFGDGGNTRDYVYVEDVVRAFYL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 G+R+NIG + E + + L L+ ++ + + R G R A Sbjct: 228 AAGPIGGGDRFNIGTSIETSDRE--------LHTLVARAAGAPDTPDYAPARLGDVPRSA 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +GW P+ ++ G+ KTV ++ Sbjct: 280 LSYQHAHDVLGWEPRVSIVEGVAKTVDYF 308 >gi|223984298|ref|ZP_03634442.1| hypothetical protein HOLDEFILI_01736 [Holdemania filiformis DSM 12042] gi|223963731|gb|EEF68099.1| hypothetical protein HOLDEFILI_01736 [Holdemania filiformis DSM 12042] Length = 362 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 29/348 (8%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 ++VTG GFIGS L + L + I V+ ID + +++ LKEI + + Sbjct: 12 ILVTGAIGFIGSNLVLKLLKKQISISVVGIDNMNDYYDVSIKEWRLKEIDKEIVNHPGST 71 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 ++F++ I D+ I ++++PD ++N AA++ V SI D +I +N+IG + +LE Sbjct: 72 WTFVKGSISDKTLINKIFEQYKPDIVINLAAQAGVRYSITNPDAYIESNLIGFYNILETC 131 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + K + S+ VYGS K +S ED NP S Y+ATK S++ + A Sbjct: 132 RHSY---DNGAKGVEHLVYASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELMAHA 188 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++I+G + ++ G RD+ Y++D V Sbjct: 189 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLIKGETIEIFNYGNCNRDFTYIDDIV 248 Query: 231 RALYLVLKK---GRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 + V++K +IGE YNIG N+ +D V + + ++P+ Y Sbjct: 249 EGIIKVMQKPPQKKIGEDGLPLPPYAIYNIGNNHPENLLDFVTILQEELVRAGVLPEDYD 308 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+S ++ + G+ P ++ GL K WY Sbjct: 309 FESHKKLVPMQPGDVPVTYADTSALERDFGFKPSTSLREGLRKFAEWY 356 >gi|149923469|ref|ZP_01911872.1| hypothetical protein PPSIR1_40969 [Plesiocystis pacifica SIR-1] gi|149815660|gb|EDM75189.1| hypothetical protein PPSIR1_40969 [Plesiocystis pacifica SIR-1] Length = 313 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 152/331 (45%), Gaps = 34/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 RL+VTGGAGFIG+ +C + V V+D L+ NL L I L DI Sbjct: 3 RLLVTGGAGFIGAQVCATAIA-AGYTVRVLDDLSTGLRSNLEGLPGIE------LLVGDI 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + C A+++ DA+++ AA V RSI + TN++GT +L+ R Sbjct: 56 RELACCEHAVRDV--DAVIHLAARGSVPRSIDDPQATMRTNVMGTTNVLDACR------- 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R +Q S+ +YG + E +P SPY+A+K +++++ AW +G+ V Sbjct: 107 --RAGVRRVVQSSSSSIYGVVPGLPRREQQRPDPRSPYAASKLAAEHVAQAWHACWGVEV 164 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + ++PL I + G L+G G+ R + YVED + Sbjct: 165 VTLRLFNVYGPRQRSDSSYAAVVPLFIAAALSGRPAELHGGGEQSRAFTYVEDVAEGILA 224 Query: 236 VLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ R+G ER N+ ++ IG L+ IP R R G Sbjct: 225 ALRSPRVGENERINLAHEACEPVRELHARIGALVGVDIPP--------RITAARRGDVLS 276 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + ++ +GW Q ++++GL T+ W+ Sbjct: 277 SSADLERARTLLGWTAQTSLDAGLAATIAWH 307 >gi|325191302|emb|CCA26087.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 366 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 104/347 (29%), Positives = 163/347 (46%), Gaps = 41/347 (11%) Query: 2 RLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLF 52 R +VTGGAGFIG + L+ D V++ID+L NL+ L E + Sbjct: 47 RFLVTGGAGFIGYHTSKALLLRGD---DVIIIDELNDYYDVRLKQSNLDDLVEHFGNERV 103 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 D+CD + ++ + E +P++I++ AA + V SI +I NI T +LLE R Sbjct: 104 KVYIGDVCDEDLVQRIMTERKPESIIHLAARAGVRPSIENPLLYIQANITATTVLLEACR 163 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 + +F+ S+ VYG +K FSE D +P SPY+ATK S + L + Sbjct: 164 RFHVQ---------KFIYASSSSVYGGSNKTSFSESDSVDHPISPYAATKKSCELLAYTY 214 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 + Y + + YGP P+ + P I G + +GDG + RD+ Y++D V Sbjct: 215 HNLYQMNCIGLRFFTVYGPRGRPD-MAPFKFVDCIARGEKIKQFGDGTSSRDYTYIDDIV 273 Query: 231 RALYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + L L K E +N+G N R+ I I+ + LI K + + ++ Sbjct: 274 DGILLSLDKATGYELFNLGNGNPILLRQFISII-------EQLIGKKAD----VDVVSNQ 322 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 PG R D SK K +G+ P +++ GL KT WY + ++R L Sbjct: 323 PGDVHRTCADISKAKRMLGYEPMTSLKVGLQKTWEWY---STYYRKL 366 >gi|221632846|ref|YP_002522068.1| UDP-glucuronate decarboxylase [Thermomicrobium roseum DSM 5159] gi|221157207|gb|ACM06334.1| UDP-glucuronate decarboxylase [Thermomicrobium roseum DSM 5159] Length = 317 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 43/338 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+ D QV+ +D L G L +++ + F F++ D+ Sbjct: 1 MRILVTGGAGFIGSHLCESLLLD-GYQVIAVDSL-LTGRLGNIRHLLTHPFFRFIEQDV- 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + + DAI + A+ + S +G ++ + N +GT+ LLE R Sbjct: 58 ------TQGIDIEADAIFHLASPA----SPVGYRQYPIETLLVNSVGTYHLLELAR---- 103 Query: 117 CLSQDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + + RF+ ST EVYG + F P P S Y K + L + + Sbjct: 104 ------RVRARFVFASTSEVYGDPLIHPQREDYFGNVNPIGPRSCYDEGKRFGEALTMEF 157 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++G+ ++ N YGP P +++P I + G + ++GDG R Y+ D Sbjct: 158 VRSFGVDARIARIFNTYGPRMDPADGRVVPNFIVHALTGEPIEIFGDGMQTRSLCYISDM 217 Query: 230 VRALYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VR L L++++ G G N+G +ER +++ + + L +P I F RP Sbjct: 218 VRGLRLLMERDGLAGTVINLGNPDERTILELAYLVRELTGNPVP--------IVFRPARP 269 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D S+ ++ +GW P+ +E GL T+ ++ D Sbjct: 270 DDPGRRCPDISRARAVLGWEPRVPVEEGLRMTIDYFQD 307 >gi|163782909|ref|ZP_02177905.1| nucleotide sugar epimerase [Hydrogenivirga sp. 128-5-R1-1] gi|159882030|gb|EDP75538.1| nucleotide sugar epimerase [Hydrogenivirga sp. 128-5-R1-1] Length = 330 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 106/341 (31%), Positives = 170/341 (49%), Gaps = 36/341 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG +C L++ +V+ ID + L L+++ F+F + Sbjct: 10 MDILVTGCAGFIGWKVCENLISRGH-RVIGIDNVNDYYDTRVKLWRLEKLRSLEGFTFHR 68 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D E +R + + DA+VN AA + V SI +++TN++GT LLE + Sbjct: 69 IDIEDYEALRKLFEGERFDAVVNEAARAGVRYSIQNPHIYVSTNVMGTLNLLELAK---- 124 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + +F+Q ST +Y F ED+P N P SPY+A+K S++ L + + Y Sbjct: 125 -----EHGVSKFVQASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKSAEALCYTYHYLY 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVED----HV 230 GI V + YGP P+ + P T +++G + LYGDG RD+ YV+D V Sbjct: 179 GIDVAILRYFTVYGPAGRPD-MSPFRFTYWVMKGEPIQLYGDGSQKRDFTYVDDIAEGTV 237 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RAL L KG E N+G N + + ++++ LI + I + + Sbjct: 238 RALDL---KGY--EIVNLGNNRPHR-------LSYMIE-LIERFTGRKANIEYGKFHKAD 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + D +K + +GW P ++E G+ KTV W+ + NW W Sbjct: 285 MKDTWADITKSEKLLGWKPTVSLEEGIEKTVRWF-EENWDW 324 >gi|206972933|ref|ZP_03233855.1| NAD-dependent epimerase/dehydratase [Bacillus cereus AH1134] gi|206731817|gb|EDZ49017.1| NAD-dependent epimerase/dehydratase [Bacillus cereus AH1134] Length = 317 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 163/325 (50%), Gaps = 30/325 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL---TYAG-NLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC+ L+ + V+ ID T A ++++ + ++ F F+Q Sbjct: 1 MKILVTGAAGFIGSHLCQALLKNSAYHVVGIDHFIGPTPATLKTDNIQSLELNSRFQFIQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 DI + + + L++ D + + AA V R+ G D +++ NII T LLE Sbjct: 61 EDILNID-LSKLLQDI--DVVYHLAAIPGV-RTSWGKDFQSYVSNNIIVTQQLLE----- 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 SC K D +F+ IST VYG G SED+ P SPY TK S ++L + Sbjct: 112 -SC-KHIKLD--KFIHISTSSVYGE-KSGAVSEDLLPTPLSPYGVTKLSGEHLCHVYHKN 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP+++ YGP P+ I +++E + ++G+G RD+ Y++D +R Sbjct: 167 FHIPIVILRYFTVYGPRQRPDMAFHRLIKQLLEDKPLTIFGNGTQTRDFTYIDDCIRGTV 226 Query: 235 LVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L KK IGE NIGG + +DI+ +++ K + +F++ PG + Sbjct: 227 AALETKKSIIGEVINIGGKEQASILDII--------SILEKISGKSATKKFLKSVPGEPK 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGL 317 + D SK + + + P ++ GL Sbjct: 279 QTWADISKANTLLQYSPTVSLSDGL 303 >gi|313905452|ref|ZP_07838817.1| NAD-dependent epimerase/dehydratase [Eubacterium cellulosolvens 6] gi|313469775|gb|EFR65112.1| NAD-dependent epimerase/dehydratase [Eubacterium cellulosolvens 6] Length = 351 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 167/341 (48%), Gaps = 23/341 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSFL 55 +++TG AGFIG AL L+ K +++ ID L L+ ++EI ++ F F Sbjct: 11 ILITGVAGFIGGALALRLITSTKARIIGIDNLNDYYDVRLKEYRLDVIREIDVNHRFVFK 70 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI DR+ + ++PD +V+ AA++ V SI +I NI+G F +++ R Sbjct: 71 KLDIVDRDAVYDLFNSYKPDIVVHLAAQAGVRYSIENPYVYIQNNIVGFFNIIDACRKMI 130 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + + FL S+ VYG+ +K + E D +P S Y+ATK + + + ++ Sbjct: 131 EMNAPVR----HFLFASSSSVYGNNEKIPYLESDNTDHPVSLYAATKKADEVIGYSYAQL 186 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP+ YGP P+ +++G +V LY G+N RD+ Y++D V A+ Sbjct: 187 YGIPMTGMRFFTVYGPVGRPDMAYYKFTEELVKGKNVKLYNQGKNKRDFTYIDDVVDAIE 246 Query: 235 LVLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDA--LIPKSYSHTELIRFIE 285 +++K + +R YNIG N+ + ++ V + L ++ + + + I + Sbjct: 247 KIMQKTPVVDRNGATYDIYNIGSNHPLETVEFVKILSEALKEHRVLDEDFVVDDSIVLCD 306 Query: 286 DRPGH-DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G D YA D+ ++ G P+ ++ GL + WY Sbjct: 307 AVVGDVDVTYA-DTERLYECFGIKPKHKIDDGLKRFAEWYF 346 >gi|57505565|ref|ZP_00371492.1| UDP-glucose 4-epimerase, putative [Campylobacter upsaliensis RM3195] gi|57016112|gb|EAL52899.1| UDP-glucose 4-epimerase, putative [Campylobacter upsaliensis RM3195] Length = 323 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 24/330 (7%) Query: 2 RLIVTGGAGFIGSALCRYL-VNDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TG GFIGS LC L +I+ L + + + G+L L+ + +L + D+ Sbjct: 3 KILITGADGFIGSHLCEILNAKGYEIKALSLYNSFNFWGHLEHLE--CREDL-EIVSGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D S +K DA+++ A + S ++ TNI GT LLE ++ Sbjct: 60 RDSFFCDSLVKGV--DAVLHLGALIAIPYSYTAPQSYVDTNIQGTLNLLEASK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF+ ST EVYGS E P P SPYSA+K +D L L++ +++ +PV Sbjct: 111 --RHGVKRFIHTSTSEVYGSAIYTPIDEKHPLQPQSPYSASKIGADMLALSYFYSFNLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +++ N YGP IP + +++ G GD RD +V D +L Sbjct: 169 IVARPFNAYGPRQSARAFIPAMMVQILSGVRELKVGDLSTKRDLNFVRDTCEGFAALLNN 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 G GE YNIG E +++ I L + S T L RP + R D Sbjct: 229 GEFGEIYNIGSGVEYAMSEVLELICKLSGVELKISQDETRL------RPKNSEVTRLLCD 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SSK+KS W Q +++ GL +T+ + +N Sbjct: 283 SSKLKSVSAWRSQISLKEGLEQTLNYIKEN 312 >gi|152975819|ref|YP_001375336.1| NAD-dependent epimerase/dehydratase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024571|gb|ABS22341.1| NAD-dependent epimerase/dehydratase [Bacillus cytotoxicus NVH 391-98] Length = 314 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 30/325 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG----NLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D V+ ID +N+++ + ++ F F+Q Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKSYSVIGIDHFIGPTPMQLKINNIRSLITNSRFEFIQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 +I + L++ A+ + AA V R+ G D ++T NI+ T LLE + Sbjct: 61 ENILSAN-LSKILQDV--SAVYHLAAIPGV-RTSWGKDFHPYVTNNILATQHLLEACK-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 KD +F+ IST VYG G SED+ P SPY TK S ++L + Sbjct: 115 -------NKDLDKFIYISTSSVYGE-KSGAVSEDLLPIPLSPYGVTKLSGEHLCHIYHTN 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP ++ YGP + I ++IE + ++GDG RD+ Y++D ++ Sbjct: 167 FHIPTIILRYFTVYGPKQRTDMAFHRFIKQLIENKPLTIFGDGTQTRDFTYIDDCIKGTV 226 Query: 235 LVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LK K IGE NIGG + +DI+ +++ K ++ F + PG + Sbjct: 227 ATLKTRKNIIGEVINIGGKEQASILDII--------SMLEKIVGQRAILNFSKGVPGEPK 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGL 317 + D SK +S + + P ++ GL Sbjct: 279 QTWADISKAQSLLQYSPSVSLFHGL 303 >gi|256853617|ref|ZP_05558982.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T8] gi|256710560|gb|EEU25603.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T8] Length = 321 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 37/345 (10%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 53 SVTDQQLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y + Sbjct: 110 ----QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDV 165 Query: 178 PVLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVED 228 P N YGP P ++ + R++ V ++GDG+ RD+++VED Sbjct: 166 PTSAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVED 225 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+AL LV + +GE YN+G +++ + ++ +P Y E R Sbjct: 226 VVQALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EAR 277 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 G + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 278 AGDIKDSLADISKLRA-IGYEPKYSIQSGLDKYVNYELKAEGKQR 321 >gi|225848521|ref|YP_002728684.1| NAD-dependent epimerase/dehydratase family protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644134|gb|ACN99184.1| NAD-dependent epimerase/dehydratase family protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 326 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 38/352 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 ++++TG AGFIG ++L+ + ++V+ ID + ++ LKE + +L F F Sbjct: 3 KVLLTGVAGFIGWKTGKFLL-EKGVEVVGIDNMNNYYDVR-LKEYRKKDLENYENFKFYP 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VDI + + K+ + D ++N AA + V S++ ++TTN GT LLE Sbjct: 61 VDIENLGALEVIFKDHKFDCVINLAARAGVRYSMINPHVYMTTNANGTLNLLEMM----- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 KK Q R + +++ + F ED+P N P SPY+A+K +++ + + + Y Sbjct: 116 -----KKYQVRKMVLASTSSLYAGQPMPFKEDLPVNTPISPYAASKKAAEVMAYTYHYLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI V + YGP P+ I I + EG + LYGDG RD+ YV+D L Sbjct: 171 GIDVSIVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIILYGDGSQSRDFTYVDDIAEGTIL 230 Query: 236 VLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--- 291 K+ +G E N+GG +++ V + I K + +I + RP H Sbjct: 231 STKE--LGYEIINLGGGKNPISLNTVIQT-------IEKYLNKKAVIDY---RPFHKADL 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 + D +K + +GW P+ + E G+ KTV WYL+N R K+++ N+ Sbjct: 279 KETWADITKAEKLLGWKPKVSFEEGIKKTVEWYLEN----REFLKDIEVGNE 326 >gi|307295622|ref|ZP_07575457.1| NAD-binding domain 4 [Enterococcus faecalis TX0411] gi|306496334|gb|EFM65911.1| NAD-binding domain 4 [Enterococcus faecalis TX0411] gi|315028622|gb|EFT40554.1| NAD-binding domain 4 [Enterococcus faecalis TX4000] Length = 324 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 36/342 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 59 DQQLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 113 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 232 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 284 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVNYELKAEGKQR 324 >gi|281490699|ref|YP_003352679.1| NAD dependent epimerase/dehydratase family protein [Lactococcus lactis subsp. lactis KF147] gi|281374468|gb|ADA63989.1| NAD dependent epimerase/dehydratase family protein [Lactococcus lactis subsp. lactis KF147] Length = 313 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS+L L+ KI V ID L+ G+ N+L E SNL L D+ D+ Sbjct: 7 ILITGGAGFIGSSLANELLPQNKITV--IDNLS-MGDFNNLHE--TSNLTKILG-DVTDK 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L+E D I + AA + V S+ E N T LLE L Q+K Sbjct: 61 NLLVKVLEENDFDYIFHLAAIASVADSVARPYETHQVNFDSTMTLLE-------ILRQNK 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K RF+ S+ VYG E+ P +PY+ K +S+ + + + + Y +P + Sbjct: 114 KSLKRFVFSSSAAVYGDEPTLPKQEEGTIRPLTPYAIDKFASEKMTMIYNNLYDVPTSAT 173 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV-L 237 N YGP P I + + R+ E + + ++GDG+ RD++Y+ED ++AL L+ Sbjct: 174 RFFNVYGPNQNPSSPYSGFISILVDRLRENTELTIFGDGEQSRDFVYIEDVIQALLLIAT 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAI 296 + GE YN+G + D+ + +++ EL I+F + R G + Sbjct: 234 SEQSFGEVYNVGTGVKNSINDL---------TKFAQKFTNKELSIKFDDVRQGDIKDSVS 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK+K +IG+ P+ ++ +G+ K + + Sbjct: 285 DISKLK-DIGYSPKFDLSNGMKKYLNY 310 >gi|15672193|ref|NP_266367.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis Il1403] gi|12723067|gb|AAK04309.1|AE006259_3 UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis Il1403] Length = 313 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 163/327 (49%), Gaps = 29/327 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS+L L+ KI V ID L+ G+ N+L E SNL L D+ D+ Sbjct: 7 ILITGGAGFIGSSLANELLPQNKITV--IDNLS-MGDFNNLHE--TSNLTKILG-DVTDK 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L+E D I + AA + V S+ E N T LLE L Q+K Sbjct: 61 NLLVKVLEENDFDYIFHLAAIASVADSVARPYETHQVNFDSTMTLLE-------ILRQNK 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K RF+ S+ VYG E+ P +PY+ K +S+ + + + + Y +P + Sbjct: 114 KSLKRFVFSSSAAVYGDEPTLPKQEEGTIRPLTPYAIDKFASEKMTMIYNNLYDVPTSAT 173 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV-L 237 N YGP P I + + R+ E + + ++GDG+ RD++Y+ED ++AL L+ Sbjct: 174 RFFNVYGPNQNPNSPYSGFISILVDRLRENTELTIFGDGEQSRDFVYIEDVIQALLLIAT 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAI 296 + GE YN+G + D+ + +++ EL I+F + R G + Sbjct: 234 SEQSFGEVYNVGTGVKNSINDL---------TKFAQKFTNKELSIKFDDVRQGDIKDSVS 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK+K +IG+ P+ ++ +G+ K + + Sbjct: 285 DISKLK-DIGYSPKFDLSNGMKKYLNY 310 >gi|304392545|ref|ZP_07374485.1| NAD-dependent epimerase/dehydratase [Ahrensia sp. R2A130] gi|303295175|gb|EFL89535.1| NAD-dependent epimerase/dehydratase [Ahrensia sp. R2A130] Length = 331 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 161/327 (49%), Gaps = 24/327 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC- 60 + +V G F G++ YL + + K S+ F ++DI Sbjct: 5 KFLVLGSNSFSGASFVDYLAEQGHDVMATSRSNEPHDAMLPYKWQKHSSDIRFQRIDINN 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +K + +VNFAA+S V +S D+++ TN++ T RL + Sbjct: 65 DLDALDALMKAEKFTHVVNFAAQSMVGQSWDHPDDWMRTNVVST------VRLHVLLRNL 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D D R++ ++T EVYGS D G ED P+NPS+PY+ ++A+ D + + TY +P + Sbjct: 119 DFLD--RYVHVTTPEVYGSTD-GWVKEDTPFNPSTPYAVSRAAGDMSLKTFVDTYDMPAV 175 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YGP ++IP + + G + L G G++VR ++++ D A + G Sbjct: 176 STRAANVYGPGQQLYRIIPRTVYAAMTGEKLRLDGGGKSVRVFIHMRDVSDATLKIAMAG 235 Query: 241 RIGERYNIGGN---NERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+ Y+I G + R+ +++V E +G D E + +RPG D Y + Sbjct: 236 TNGDTYHISGYELVSIRQLVEMVLEKLGKNFD----------ECVELGPERPGKDTAYTL 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 DS K+++E+GW + ++ G++ + W Sbjct: 286 DSFKLRTELGWQDRISLSDGIDDVIEW 312 >gi|312900810|ref|ZP_07760104.1| NAD-binding domain 4 [Enterococcus faecalis TX0470] gi|311291909|gb|EFQ70465.1| NAD-binding domain 4 [Enterococcus faecalis TX0470] Length = 325 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 32/340 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 8 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNASENITFIEGSVTDQ 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 62 QLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 115 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 174 Query: 183 NCSNNYGPYHFPEKLIPLAIT-------RMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P I+ R++ V ++GDG+ RD+++VED V+AL Sbjct: 175 RFFNVYGPNQNPNSPYSGVISIVMDKKKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 234 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 235 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 286 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 287 DSLADISKLRA-IGYEPKYSIQSGLDKYVNYELKAEGKQR 325 >gi|289450913|gb|ADC93830.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Canicola] Length = 329 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 99/358 (27%), Positives = 167/358 (46%), Gaps = 49/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS L L+ + + +V V+D + A NLN +KE ++D Sbjct: 1 MKALVTGGAGFIGSHLVDLLLEN-QFEVTVLDNFSTGRAFNLNHVKE----------KID 49 Query: 59 I--CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + CD +K+FQ D + + AA + + SI + + +N+ GT +L+ +R + Sbjct: 50 LVECDLSIQEDWIKKFQSVDYVFHLAALADIVPSIQNPEGYFQSNVTGTLNVLQASRRY- 108 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ ++ YG + E P P PY+ TK + LV+ W Y Sbjct: 109 --------NVKRFVYAASSSCYGIPELYPTPETSPILPQYPYALTKRMGEELVMHWAQVY 160 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 P L N YGP + + + + + G + GDG+ RD+ YV D V Sbjct: 161 KFPALSLRFFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPFTVVGDGKQTRDFTYVRDVVE 220 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++ + ++GE YN+ G+ +++ + E LL + +I RPG Sbjct: 221 AVFAAAQSDKVGEIYNV-GSGATISVNRIVE---LLKG----------EVTYIPKRPGEP 266 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 D +KIK ++ WFP+ ++E+G+ + L N +WR P++ K + S W Sbjct: 267 DSTFADIAKIKKDLKWFPKISIETGIGE----LLKNIDYWREAPVWTPDKIEKATSDW 320 >gi|29376673|ref|NP_815827.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis V583] gi|227520221|ref|ZP_03950270.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] gi|227555344|ref|ZP_03985391.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis HH22] gi|29344137|gb|AAO81897.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis V583] gi|227072300|gb|EEI10263.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] gi|227175555|gb|EEI56527.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis HH22] gi|315575155|gb|EFU87346.1| NAD-binding domain 4 [Enterococcus faecalis TX0309B] gi|315582582|gb|EFU94773.1| NAD-binding domain 4 [Enterococcus faecalis TX0309A] Length = 324 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 161/340 (47%), Gaps = 32/340 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNASENITFIEGSVTDQ 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 61 QLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 114 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 173 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 174 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 233 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 234 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 286 DSLADISKLRA-IGYEPKYSIQSGLDKYVKYELKAEGKQR 324 >gi|257416481|ref|ZP_05593475.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis AR01/DG] gi|257419723|ref|ZP_05596717.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T11] gi|257158309|gb|EEU88269.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ARO1/DG] gi|257161551|gb|EEU91511.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T11] Length = 321 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 37/345 (10%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 53 SVIDQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y + Sbjct: 110 ----QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDV 165 Query: 178 PVLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVED 228 P N YGP P ++ + R++ V ++GDG+ RD+++VED Sbjct: 166 PTSAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVED 225 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+AL LV + +GE YN+G +++ + ++ +P Y E R Sbjct: 226 VVQALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EAR 277 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 G + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 278 AGDIKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYELKAEGKQR 321 >gi|256762972|ref|ZP_05503552.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T3] gi|256684223|gb|EEU23918.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T3] Length = 321 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 37/345 (10%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 53 SVIDQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y + Sbjct: 110 ----QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDV 165 Query: 178 PVLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVED 228 P N YGP P ++ + R++ V ++GDG+ RD+++VED Sbjct: 166 PTSAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVED 225 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+AL LV + +GE YN+G +++ + ++ +P Y E R Sbjct: 226 VVQALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EAR 277 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 G + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 278 AGDIKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYELKAEGKQR 321 >gi|229545315|ref|ZP_04434040.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] gi|229309522|gb|EEN75509.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] Length = 324 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 12 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNASENITFIEGSVTDQ 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 66 QLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 119 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 178 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 179 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 238 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 239 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 290 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 291 DSLADISKLRA-IGYEPKYSIQSGLDKYVNYEL 322 >gi|315174076|gb|EFU18093.1| NAD-binding domain 4 [Enterococcus faecalis TX1346] Length = 324 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 36/342 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 59 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 113 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 232 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 284 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYELKAEGKQR 324 >gi|315161355|gb|EFU05372.1| NAD-binding domain 4 [Enterococcus faecalis TX0645] Length = 316 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEGSVT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYEL 314 >gi|308180148|ref|YP_003924276.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045639|gb|ADN98182.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 315 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 162/323 (50%), Gaps = 25/323 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L +LV + + V+V+D L+ G+L+++K Q + +++ D+ Sbjct: 1 MKALVTGGAGFIGSHLVDHLVAE-GLDVVVVDNLS-MGDLHNIKH--QDEVTVYVE-DVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + ++ L+E QPD I AA + V SI E + N F +LE R + Q Sbjct: 56 NEKFMQQLLQEEQPDYIYFLAAVASVADSIERPAETHSVNQTAVFNMLEYIRKTALPIKQ 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG+L + ED +P SPY+ K +++ VLA+G Y +P + Sbjct: 116 -------FLFTSSAAVYGNLPELPKKEDSRVDPLSPYAIDKYATERFVLAYGELYDLPTV 168 Query: 181 LSNCSNNYGPYHFPEKL---IPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P + +T ++ F LYGDG RD++YVED ++AL+L+ Sbjct: 169 CVRFFNVYGPGQNPSSPYSGVLSILTDCLKNDKAFTLYGDGSQTRDFVYVEDVIQALWLI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K E +NI NE I+ + + ++ R G +R Sbjct: 229 TKSDTSHEVFNIANGNEASLTSIIETYETVTGQKLQ--------VKMAPGREGEVKRSVA 280 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 + K+ ++G+ + ++E+GL+K Sbjct: 281 NIGKL-VKLGYTTKWSLEAGLSK 302 >gi|295113339|emb|CBL31976.1| Nucleoside-diphosphate-sugar epimerases [Enterococcus sp. 7L76] Length = 316 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G ++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNKLISSLNDIMQVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSSADISKLRA-IGYEPKYSIQSGLDKYVKYEL 314 >gi|224437522|ref|ZP_03658480.1| NAD-dependent epimerase/dehydratase family protein [Helicobacter cinaedi CCUG 18818] gi|313143972|ref|ZP_07806165.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129003|gb|EFR46620.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 334 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 30/340 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-----IDKLTYAGNLNS---LKEISQSNLF 52 M++++TG GFIGS L + L KIQ V I L+ + NS L++I + Sbjct: 1 MQILITGADGFIGSHLTQALYEQSKIQDSVFFNAKIKALSLYNSFNSWGWLEDIDCLDSI 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + DI D + K D + + AA + S + D ++ TNI GT + Sbjct: 61 EVISGDIRDPHFCKHICKGV--DMVFHLAALIAIPYSYVAPDSYVDTNIKGTLNI----- 113 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 C + R + ST EVYG+ E P P SPYSA+K +D + +++ Sbjct: 114 ----CQAALDSGVKRIIHTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIGADAIAMSFH 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + +P+ ++ N YGP +IP IT++ G+ GD RD+ YV+D Sbjct: 170 NAFCLPLTIARPFNTYGPRQSARAVIPTIITQIANGAKQIKLGDTTPTRDFNYVKDTCAG 229 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGH 290 + L L + IGE NIG N E D + I L+ S E I + RP Sbjct: 230 FIALALAENTIGEVINIGSNAEISIHDTLELIKELMK-------SDVEFITEKQRIRPEK 282 Query: 291 DRRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + D++KI+S G+ P+ ++ GL +T+ W+ + N Sbjct: 283 SEVFRLWCDNTKIQSLTGFSPRYTLKEGLQETIEWFSNPN 322 >gi|257082139|ref|ZP_05576500.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis E1Sol] gi|256990169|gb|EEU77471.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis E1Sol] Length = 319 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVLFEL 314 >gi|257090435|ref|ZP_05584796.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis CH188] gi|256999247|gb|EEU85767.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis CH188] Length = 319 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 101/338 (29%), Positives = 163/338 (48%), Gaps = 37/338 (10%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 53 SVTDQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y + Sbjct: 110 ----QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDV 165 Query: 178 PVLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVED 228 P N YGP P ++ + R++ V ++GDG+ RD+++VED Sbjct: 166 PTSAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVED 225 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+AL LV + +GE YN+G +++ + ++ +P Y E R Sbjct: 226 VVQALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EAR 277 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 278 AGDIKDSLADISKLRA-IGYEPRYSIQSGLDKYVKYEL 314 >gi|315031076|gb|EFT43008.1| NAD-binding domain 4 [Enterococcus faecalis TX0017] Length = 319 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 32/332 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L Y D QV+V+D L+ + + ++ S +F++ + D++ Sbjct: 8 LITGGAGFIGSTLANYYSKD--NQVVVVDDLS----MGQTENLNASENITFIEGSVTDQQ 61 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L+E+Q D I + AA + V S+ E N LLE R + +K Sbjct: 62 LMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------QK 114 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 D R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 115 DLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAVR 174 Query: 184 CSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRALY 234 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 175 FFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQALN 234 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV + +GE YN+G +++ + ++ +P +Y E R G + Sbjct: 235 LVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVAYK--------EARAGDIKD 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 287 SLADISKLRA-IGYEPKYSIQSGLDKYVKYEL 317 >gi|302384372|ref|YP_003820195.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] gi|302195000|gb|ADL02572.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] Length = 334 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 151/335 (45%), Gaps = 22/335 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GFIGS LC LV D +V + + T G+ L + ++ D+ D Sbjct: 14 RVLVTGAGGFIGSRLCERLVAD-GAEVRALVRYTSDGDAGWLDRSPIRKDIAVVRGDLAD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + +A+++ D + + A + S + ++ TNI+GT +L+ R Sbjct: 73 RDSVFAAVRDR--DVVFHLGALIAIPYSYEAPESYVRTNILGTLNVLQAVR--------- 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ST EVYGS +E P SPYSA+K +D L ++ ++G PV+ Sbjct: 122 ELSVGRLIHTSTSEVYGSAQTVPMTEAHPLVGQSPYSASKIGADKLAESYHRSFGTPVVT 181 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N +GP +IP +++ G + + GD + RD+++V+D V A Sbjct: 182 LRPFNTFGPRQSARAVIPSITMQLLAGRTIRM-GDTRPTRDFVFVDDTVDAFVRAATASG 240 Query: 242 I-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDS 298 I G + GG E D+ IG + L RP R D+ Sbjct: 241 IEGLTIHFGGGREIAIGDLPALIGAAAGLPVSVEIDPQRL------RPAASEVERLIADA 294 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 S + +GW P+ ++E GL + V + D+ +RP Sbjct: 295 SLARQRLGWQPRVSVEEGLARVVAFIRDHPGLYRP 329 >gi|256961465|ref|ZP_05565636.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Merz96] gi|256951961|gb|EEU68593.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Merz96] Length = 316 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 101/338 (29%), Positives = 163/338 (48%), Gaps = 37/338 (10%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEG 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 53 SVIDQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y + Sbjct: 110 ----QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDV 165 Query: 178 PVLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVED 228 P N YGP P ++ + R++ V ++GDG+ RD+++VED Sbjct: 166 PTSAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVED 225 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+AL LV + +GE YN+G +++ + ++ +P Y E R Sbjct: 226 VVQALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVALPVEYK--------EAR 277 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 278 AGDIKDSLADISKLRT-IGYEPKYSIQSGLDKYVKYEL 314 >gi|225851162|ref|YP_002731396.1| NAD-dependent epimerase/dehydratase [Persephonella marina EX-H1] gi|225646138|gb|ACO04324.1| NAD-dependent epimerase/dehydratase [Persephonella marina EX-H1] Length = 332 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 153/330 (46%), Gaps = 27/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNS---LKEISQSNL--FSFL 55 +++VTG GFIGS L L+ K++ V Y + NS L + L Sbjct: 7 KVLVTGSCGFIGSHLVERLIEKGCKVRAFV-----YYNSFNSWGWLDTFPREKLDRIEVF 61 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D +R+A+K D + + AA + S D ++ TNI GT +L+ R + Sbjct: 62 TGDIRDPNGVRTAVKGM--DLVFHLAALIGIPFSYHSPDSYVDTNIKGTLNILQACRDY- 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 D + L ST EVYG+ E P SPYSATK +DY+ ++ ++ Sbjct: 119 --------DIEKVLVTSTSEVYGTAQYVPIDEKHPRQGQSPYSATKIGADYIAESFYRSF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV++ N YGP +IP IT+++ G G RD ++V+D V Sbjct: 171 NLPVVIVRPFNTYGPRQSARAVIPTIITQLLSGKKEIKLGALHPTRDLVFVKDTVEGFIK 230 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + + R +GE NI E D+ +I +D + P++ T+ R ++ +R Sbjct: 231 IAESERTVGEEINIATGKEISIGDLAKKI---IDMINPEARIVTDQERLRPEKSEVERLL 287 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++KIK GW P+ ++E GL T+ W+ Sbjct: 288 G-DNTKIKMLTGWEPEYSLEEGLKITIEWF 316 >gi|257422118|ref|ZP_05599108.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis X98] gi|257163942|gb|EEU93902.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis X98] Length = 319 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNVSENITFIEGSVTDQ 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 58 QLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 111 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 170 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 171 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 230 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 231 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 283 DSLADISKLRA-IGYKPKYSIQSGLDKYVLFEL 314 >gi|229549557|ref|ZP_04438282.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] gi|255972255|ref|ZP_05422841.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T1] gi|256956554|ref|ZP_05560725.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis DS5] gi|312951159|ref|ZP_07770062.1| NAD-binding domain 4 [Enterococcus faecalis TX0102] gi|229305222|gb|EEN71218.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] gi|255963273|gb|EET95749.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T1] gi|256947050|gb|EEU63682.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis DS5] gi|310630824|gb|EFQ14107.1| NAD-binding domain 4 [Enterococcus faecalis TX0102] gi|315034732|gb|EFT46664.1| NAD-binding domain 4 [Enterococcus faecalis TX0027] gi|315152645|gb|EFT96661.1| NAD-binding domain 4 [Enterococcus faecalis TX0031] gi|315159508|gb|EFU03525.1| NAD-binding domain 4 [Enterococcus faecalis TX0312] gi|327535560|gb|AEA94394.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis OG1RF] Length = 316 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRT-IGYEPKYSIQSGLDKYVNYEL 314 >gi|255975365|ref|ZP_05425951.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T2] gi|307277769|ref|ZP_07558855.1| NAD-binding domain 4 [Enterococcus faecalis TX0860] gi|255968237|gb|EET98859.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T2] gi|306505648|gb|EFM74832.1| NAD-binding domain 4 [Enterococcus faecalis TX0860] Length = 316 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVNYEL 314 >gi|327542945|gb|EGF29395.1| nucleotide sugar epimerase [Rhodopirellula baltica WH47] Length = 322 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 33/339 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M +VTG AGFI + + L+ + V+ ID + Y L + L+++ N F F++ Sbjct: 1 MHYLVTGVAGFIANRVAAQLL-EAGHSVVGIDNVNDYYDVRLKEHRLEKLEHEN-FQFVR 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DRE + + + DA++N AA + V S+ ++TTN +G+ LL++ + Sbjct: 59 GDIEDRELLETIFNDHSFDAVINLAARAGVRYSMENPYVYMTTNAMGSLNLLDQMQ---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K +++ ST +Y FSE +P N P SPY+A+K S++ + ++ H Y Sbjct: 115 -----KHGIQKYVLASTSSLYAG-QPMPFSESLPVNTPISPYAASKKSAEMMAHSYHHLY 168 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI V + YGP P+ I I + EG+ + L+GDG+ RD+ YV+D R Sbjct: 169 GIDVSICRYFTVYGPAGRPDMCIFRFIKWIDEGTPIELFGDGEQARDFTYVDDIARGTIA 228 Query: 236 VLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--- 291 K +G E N+GG + +++ V I L + L K+ +E + H Sbjct: 229 ATKS--VGFEIINLGGGGQPVSLNTV--IAGLEERLGKKAK--------LEHKTFHKADI 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + D SK + W PQ ++E+GL V W+ DN W Sbjct: 277 KLTQADISKANQLLDWHPQTDLETGLTACVDWHNDNKPW 315 >gi|315167523|gb|EFU11540.1| NAD-binding domain 4 [Enterococcus faecalis TX1341] Length = 322 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEGSVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 59 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 113 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 232 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 284 IKDSLADISKLRT-IGYEPKYSIQSGLDKYVKYEL 317 >gi|296134269|ref|YP_003641516.1| NAD-dependent epimerase/dehydratase [Thermincola sp. JR] gi|296032847|gb|ADG83615.1| NAD-dependent epimerase/dehydratase [Thermincola potens JR] Length = 328 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/335 (28%), Positives = 155/335 (46%), Gaps = 21/335 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L LV +L +V + L+E + DI D Sbjct: 7 KVLVTGAGGFIGSHLTERLV-ELGAEVTAFVRYNSRNYWGWLEESCYLKDIRVVNGDIRD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +RSA K + I + AA + S ++ TN+ GT+ +L+ R L + Sbjct: 66 YDSVRSAAK--GAEVIFHLAALIGIPYSYESPIAYLKTNVEGTYNVLQAAR----ELGTE 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + ST EVYG+ SE P NP SPY+A+K+ +D+L L++ ++ +PV + Sbjct: 120 K-----VIVTSTSEVYGTAQFVPISEAHPINPQSPYAASKSGADFLALSYYRSFDLPVAV 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 N YGP +IP I ++ GS G RD +V+D + + + +G Sbjct: 175 IRPFNTYGPRQSARAIIPTVIAQIAAGSRKIRLGSLTPTRDLTFVKDTAEGFIQVAVSEG 234 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDS 298 +G+ N+G N E D+ I ++ A I TE R RP R D+ Sbjct: 235 SVGQVINVGSNFEISIGDLAGLIARIMGAEIE---IETEKER---QRPAKSEVERLLADT 288 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 +K K+ I W P+ +E G+ +T W ++ ++P Sbjct: 289 AKAKALINWAPRYTLEEGIKETAEWIREHLAHYKP 323 >gi|315157152|gb|EFU01169.1| NAD-binding domain 4 [Enterococcus faecalis TX0043] Length = 323 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 8 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNVSENITFIEGSVTDQ 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 62 QLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 115 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 174 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 175 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 234 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 235 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 286 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 287 DSLADISKLRA-IGYKPKYSIQSGLDKYVLFEL 318 >gi|315025851|gb|EFT37783.1| NAD-binding domain 4 [Enterococcus faecalis TX2137] Length = 325 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 36/342 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ + NLN IS++ +F++ + Sbjct: 8 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGHTENLN----ISEN--ITFIEGSVI 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 60 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 114 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 172 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 173 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 232 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 233 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 285 IKDSLADISKLRT-IGYEPKYSIQSGLDKYVNYELKAEGKQR 325 >gi|312902879|ref|ZP_07762083.1| NAD-binding domain 4 [Enterococcus faecalis TX0635] gi|310633933|gb|EFQ17216.1| NAD-binding domain 4 [Enterococcus faecalis TX0635] gi|315578207|gb|EFU90398.1| NAD-binding domain 4 [Enterococcus faecalis TX0630] Length = 322 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 59 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 113 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 232 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 284 IKDSLADISKLRA-IGYEPRYSIQSGLDKYVKYEL 317 >gi|257079479|ref|ZP_05573840.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis JH1] gi|294780381|ref|ZP_06745750.1| NAD-binding protein [Enterococcus faecalis PC1.1] gi|307270207|ref|ZP_07551520.1| NAD-binding domain 4 [Enterococcus faecalis TX4248] gi|307287359|ref|ZP_07567420.1| NAD-binding domain 4 [Enterococcus faecalis TX0109] gi|256987509|gb|EEU74811.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis JH1] gi|294452645|gb|EFG21078.1| NAD-binding protein [Enterococcus faecalis PC1.1] gi|306501600|gb|EFM70895.1| NAD-binding domain 4 [Enterococcus faecalis TX0109] gi|306513423|gb|EFM82042.1| NAD-binding domain 4 [Enterococcus faecalis TX4248] gi|315146213|gb|EFT90229.1| NAD-binding domain 4 [Enterococcus faecalis TX4244] gi|315164694|gb|EFU08711.1| NAD-binding domain 4 [Enterococcus faecalis TX1302] Length = 316 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVNYEL 314 >gi|315143372|gb|EFT87388.1| NAD-binding domain 4 [Enterococcus faecalis TX2141] Length = 316 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNVSENITFIEGSVTDQ 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 58 QLMEKVLREYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 111 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 170 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 171 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 230 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 231 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 283 DSLADISKLRA-IGYKPKYSIQSGLDKYVNYEL 314 >gi|293382114|ref|ZP_06628058.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis R712] gi|293386631|ref|ZP_06631208.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis S613] gi|312908242|ref|ZP_07767206.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 512] gi|312910687|ref|ZP_07769528.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 516] gi|291080493|gb|EFE17857.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis R712] gi|291083924|gb|EFE20887.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis S613] gi|310625656|gb|EFQ08939.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 512] gi|311289063|gb|EFQ67619.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 516] Length = 319 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 59 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 113 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 232 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVALPVEYK--------EARAGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 284 IKDSLADISKLRT-IGYEPKYSIQSGLDKYVKYEL 317 >gi|325295628|ref|YP_004282142.1| UDP-glucuronate 5'-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066076|gb|ADY74083.1| UDP-glucuronate 5'-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 324 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 98/338 (28%), Positives = 160/338 (47%), Gaps = 30/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 + +TG AGFIG L+ V+ +D L Y L LK + ++ F F QVD Sbjct: 4 VFLTGAAGFIGYKTAEILIQK-GYNVIGVDNLNNYYDVRLKEYRLKNLEKNKNFKFYQVD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + ++ ++ + D ++N AA + V S++ ++ TN GT LLE L Sbjct: 63 IENFGALKVIFEDNKIDGVINLAARAGVRYSLIDPFVYVRTNTTGTLNLLE--------L 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 +DKK + +F+ ST +Y F ED+P N P SPY+A+K ++ + ++ + YGI Sbjct: 115 MKDKKVK-KFVLASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKGAEAVAYSYHYLYGI 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V + YGP P+ I I + EG + ++GDG RD+ Y++D + L Sbjct: 173 DVTVLRYFTVYGPIGRPDMSIFRFIKWIDEGKPIEIFGDGTQSRDFTYIDDIAKGTVKAL 232 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD---RRY 294 + E N+GGN +E+ ++++ + E I +P H + Sbjct: 233 ETETGYEIINLGGNKP-------YELNYVIELIEEYIGKKAEKIY----KPFHKADLKAT 281 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D K K + W PQ +E GL KTV W+++N W + Sbjct: 282 WADIEKAKRILDWEPQIPLEEGLKKTVDWHIENREWLK 319 >gi|257087302|ref|ZP_05581663.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis D6] gi|256995332|gb|EEU82634.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis D6] Length = 321 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 36/342 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ + NLN IS++ +F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGHTENLN----ISEN--ITFIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + D SK+++ IG+ P+ +++SGL+K V + L R Sbjct: 281 IKDSLADISKLRT-IGYEPKYSIQSGLDKYVNYELKAEGKQR 321 >gi|170742172|ref|YP_001770827.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168196446|gb|ACA18393.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 406 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 160/329 (48%), Gaps = 25/329 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG AGF+GS R L + V + L GN + ++++ + +++ D Sbjct: 11 RVLVTGSAGFLGSWTVRTLRESGALVVGYVRDLNAYGN-SLADDLAKPTIVVHGRLE--D 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE +R A+ E + D +++ AA+ V ++ NI GT+ LL+ RL+ Sbjct: 68 RETLRRAVNEHEVDTVIHLAAQPIVGTALRDPVGTFEANIRGTWNLLDACRLYGKV---- 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+D+ YGS D ++EDMP +PY +K+ +D L ++ TYG+P+ + Sbjct: 124 ----ERILVASSDKSYGSSDVLPYTEDMPLVGRAPYDVSKSCTDLLARSYFETYGLPICI 179 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--- 237 + N +G +L+P I + G L DG +RD++YV D V A YL + Sbjct: 180 TRAGNFFGGGDLNFNRLVPGTIRWALRGERPVLRSDGTMIRDYIYVRDVV-AGYLAIGEA 238 Query: 238 --KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G GE +N+ +NE + F L P E + E R D ++ Sbjct: 239 MHEPGVAGEAFNL--SNETPLSTMAFTHEILRACRRPD----LEPLVLGEARSEIDAQH- 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++K++ +GW P+ +M L +TV WY Sbjct: 292 LSAAKVRRIVGWSPRWSMADALAETVAWY 320 >gi|241518318|ref|YP_002978946.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862731|gb|ACS60395.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 680 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 105/363 (28%), Positives = 164/363 (45%), Gaps = 49/363 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 +++TGG GFIGS L + D + V+V+D L G NL L E SN+ L D+ Sbjct: 331 IVITGGCGFIGSNLADSYLQDGE-DVVVLDNLGRPGVDQNLGWLTERHGSNVHPVL-ADV 388 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I +A + + A+ +FAA++ V S++ + N GT +LE R Sbjct: 389 RDARSIEAAFADAK--AVFHFAAQTAVTTSLIHPIDDFEANARGTINVLESVR------K 440 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLF-------------------SEDMPYNPSSPYSAT 160 ++ F ST++VYG LD ED P + +PY + Sbjct: 441 AGRRAPVIF--ASTNKVYGGLDDLAMREAEDRYLPVDATVRSYGIGEDRPLDFCTPYGCS 498 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D VL + ++ IP + S YGP F + + + R + G V +YGDG Sbjct: 499 KGVADQYVLDYAKSFSIPTAVLRMSCIYGPRQFGTEDQGWVAHFLIRALAGEPVSIYGDG 558 Query: 218 QNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGN--NERKNIDIVFEIGFLLDALIPK 273 + VRD L+V D V A VL G G +N+GG N + ++ EIG L+ + Sbjct: 559 KQVRDILHVADAVAAYRGVLDGIDGVKGRVFNLGGGPTNAVSVLAVLREIGKLIGRPVET 618 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 S F + RPG + D+ K++ +GW + ESGL W +++ + RP Sbjct: 619 S--------FDDWRPGDQYFFVADTRKLQHTLGWSARVGWESGLRHLAEWLIEHRFGGRP 670 Query: 334 LYK 336 + + Sbjct: 671 ILR 673 >gi|315149292|gb|EFT93308.1| NAD-binding domain 4 [Enterococcus faecalis TX0012] Length = 319 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNVSENITFIEGSVTDQ 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 61 QLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 114 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 173 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 174 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 233 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 234 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 286 DSLADISKLRA-IGYEPKYSIQSGLDKYVNYEL 317 >gi|256619578|ref|ZP_05476424.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ATCC 4200] gi|256963447|ref|ZP_05567618.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis HIP11704] gi|307272703|ref|ZP_07553950.1| NAD-binding domain 4 [Enterococcus faecalis TX0855] gi|307276099|ref|ZP_07557232.1| NAD-binding domain 4 [Enterococcus faecalis TX2134] gi|256599105|gb|EEU18281.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ATCC 4200] gi|256953943|gb|EEU70575.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis HIP11704] gi|306507429|gb|EFM76566.1| NAD-binding domain 4 [Enterococcus faecalis TX2134] gi|306510317|gb|EFM79340.1| NAD-binding domain 4 [Enterococcus faecalis TX0855] Length = 316 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNTSENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G ++ + ++ +P Y E R G Sbjct: 229 ALNLVAHSDQSLGEVYNVGTGKATDLNKLISSLNDIMQVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYEL 314 >gi|183985314|ref|YP_001853605.1| dTDP-glucose-4,6-dehydratase, RmlB_1 [Mycobacterium marinum M] gi|183178640|gb|ACC43750.1| dTDP-glucose-4,6-dehydratase, RmlB_1 [Mycobacterium marinum M] Length = 328 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/336 (28%), Positives = 162/336 (48%), Gaps = 35/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++V GGAGF GS L L+ D + VL N+ + + SF+ + Sbjct: 1 MEILVIGGAGFQGSHLTESLLADGHWVTVLNTPSKNTTRNMQGFQSHER---VSFISGSV 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + A+++ + + AA ++VD S+ F+ TN++GT+ LE R + + Sbjct: 58 TDGETVYRAVRDHH--VVFHLAARTNVDESLSDPKSFLETNVMGTYRALEAVRRYRN--- 112 Query: 120 QDKKDQFRFLQISTDEVYG---SLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R + +ST EVYG +L++G E P+SPY+A+KA++D L ++ ++ Sbjct: 113 -------RLIYVSTCEVYGDGHNLEEGQRLDEHAELKPNSPYAASKAAADRLCYSYFRSF 165 Query: 176 GIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 GI V + N +G + LIP + + I G ++ ++G G + RD+LY+ D V A Sbjct: 166 GIDVTIVRPFNIFGIRQKTGRFGALIPRLVRQAINGKNLTIFGAGTSSRDYLYISDIVNA 225 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L+L+ + G+ N + DIV + DA I + RPG Sbjct: 226 YNLILQTPSLRGQTINFASGKDTCVKDIVEYVAGKFDATIEHR----------DARPGEV 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R+ D S +S IG+ PQ ++ G+++ + W D Sbjct: 276 QRFPADISLARS-IGFEPQVDIWEGIDRYIAWAKDQ 310 >gi|88799032|ref|ZP_01114613.1| probable nucleotide sugar dehydratase [Reinekea sp. MED297] gi|88778259|gb|EAR09453.1| probable nucleotide sugar dehydratase [Reinekea sp. MED297] Length = 321 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/326 (29%), Positives = 147/326 (45%), Gaps = 25/326 (7%) Query: 5 VTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +TG GFIGS L LV +++ L + + G L L + Q + D+ D Sbjct: 1 MTGADGFIGSHLVELLVAKGYQVRALAQYNSFNFWGWLEDLDCLDQVEVVCG---DVRDP 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ K+ D + + AA + S D ++ TN+ GT + C + Sbjct: 58 YFCQTLTKDI--DWVFHLAALIAIPYSYTAPDSYVDTNVKGTLNI---------CQAALH 106 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + ST EVYG+ E P P SPYSA+K S D++ L++ + +G+PV ++ Sbjct: 107 NGVEQVIHTSTSEVYGTAQYVPIDEQHPLQPQSPYSASKMSGDHMALSFFNAFGLPVSVA 166 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKGR 241 N YGP +IP IT++ G V GD RD+ YV D L + KG Sbjct: 167 RPFNTYGPRQSARAVIPSVITQIASGKKVLKLGDLSPTRDFNYVTDTCHGFLSIAEAKGT 226 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDSS 299 GE NIG N+E D + I ++ A + L RP R D+ Sbjct: 227 EGEIINIGSNSEISIYDTLELIRQIMQADVAIQTDEARL------RPEKSEVHRLWCDNR 280 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYL 325 KIK G+ PQ ++++GL KT+ W+L Sbjct: 281 KIKELTGYVPQHDLKAGLTKTIEWFL 306 >gi|328951329|ref|YP_004368664.1| UDP-glucose 4-epimerase [Marinithermus hydrothermalis DSM 14884] gi|328451653|gb|AEB12554.1| UDP-glucose 4-epimerase [Marinithermus hydrothermalis DSM 14884] Length = 314 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 34/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L + I V V+D L+ + ++ Q DI Sbjct: 1 MRVLVTGGAGFIGSHLVHAL-HQKGIPVAVLDDLSTGKRAHIPPDVP------LYQTDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A ++FQP + + AA++ V S+ + N++G +LE R + Sbjct: 54 DLNAVLHAFQDFQPTHVAHQAAQASVKHSVQNPCKDAEINLLGGLNILEAMRATGT---- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q + +YG + +G + + P P SPY+A+KA+ ++ + + T+G+ Sbjct: 110 ----QKIVFASTGGAIYGEVPEGRRAPETWPPKPKSPYAASKAAFEHYLEVYRQTHGLTY 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHVR 231 +N YGP P ++ + R++ V LY GD +RD+++VED R Sbjct: 166 TTLRYANVYGPRQDPHGEAGVVAIFTNRLLHAQPVTLYARKEPGDPGCIRDYIHVEDVTR 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L L+ G YN+ R D+++ I ++ T + + R G Sbjct: 226 ANLLALETNLEGT-YNVSTGQGRTTEDVLYTIA--------RALGTTPRVTYAPPRDGDL 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D +++++ GW PQ E G+ +TV W+ + Sbjct: 277 EVSVLDPTQLQAH-GWRPQVPFEEGIRRTVAWFREQT 312 >gi|320162561|ref|YP_004175786.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] gi|319996415|dbj|BAJ65186.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] Length = 325 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/338 (29%), Positives = 156/338 (46%), Gaps = 27/338 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQV 57 R +VTG AGFI + +C L+ + +V+ +D L A ++ L + F+F + Sbjct: 3 RYLVTGAAGFIAARVCEMLL-ERGDEVIGVDNLCTAYDVRLKHYRLNRLLPRENFTFHGM 61 Query: 58 DICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR + + ++ P D I+N AA + V S+ F+ TNI GT LLE R + Sbjct: 62 DISDRRGVDALVQASAPLDGIINLAARAGVRASVEDPWVFVETNITGTLNLLEAARRYGV 121 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 +F+ ST +YG ED P + P PYSA+K ++ L A+ Y Sbjct: 122 N---------KFILASTSSIYGENAPLPTPEDAPSDRPLQPYSASKKGAEALCHAYHFLY 172 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V + YGP P+ ++ + EG V L GDG+ R + YV+D R L Sbjct: 173 GLDVTIFRYFTVYGPAGRPDMVMFRFTQWITEGRPVHLNGDGEQSRGFTYVDDIARGTLL 232 Query: 236 VLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LK +G E N+GG+ V I ++ L +++R R Sbjct: 233 GLKP--LGFEIINLGGHE-------VITINQMIARLEQYIGRKAQVVRHPAHRADMLANQ 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 A D SK ++ +GW PQ ++ G+ + V WY+ W + Sbjct: 284 A-DVSKARALLGWEPQVGLDEGMRRLVDWYMAERSWAK 320 >gi|225020229|ref|ZP_03709421.1| hypothetical protein CORMATOL_00232 [Corynebacterium matruchotii ATCC 33806] gi|224946973|gb|EEG28182.1| hypothetical protein CORMATOL_00232 [Corynebacterium matruchotii ATCC 33806] Length = 315 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 152/329 (46%), Gaps = 26/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L +LV V V+D L+ G +++L + D+ Sbjct: 1 MHVLVTGGAGFIGSHLVDFLVVHGH-SVTVLDNLSR-GRMSNLDNALVCGNVRVITEDLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + QP I + AA+ V RS+ TNII T L E R Sbjct: 59 DSD-LEQLIADTQPGVIFHLAAQIDVRRSVAEPLFDAHTNIISTIRLAEAAR-------- 109 Query: 121 DKKDQFR--FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+ R S +YG ++ +E+ P +P SPY+A K S + + + H YG+ Sbjct: 110 --KNNVRKIVFTSSGGSIYGKPEQFPITENTPIDPHSPYAAAKISGEIYLNTFRHLYGLD 167 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +N YGP P ++ + R++ G ++GDG N RD++YV D VRA YL Sbjct: 168 CSHIAPANVYGPRQDPHGEAGVVAIFAQRLLNGHPTTIFGDGGNTRDYVYVGDVVRAFYL 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 G+R+NIG + E + + L L+ ++ + + R G R A Sbjct: 228 AAGPIGGGDRFNIGTSIETSDRE--------LHTLVAQAAGAPDTPDYAPARLGDVPRSA 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +GW P+ ++ G+ KTV ++ Sbjct: 280 LSYQHAHDVLGWEPRVSIVEGVAKTVDYF 308 >gi|194016028|ref|ZP_03054643.1| NAD-dependent epimerase/dehydratase [Bacillus pumilus ATCC 7061] gi|194012383|gb|EDW21950.1| NAD-dependent epimerase/dehydratase [Bacillus pumilus ATCC 7061] Length = 334 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 167/330 (50%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L + L++ + LV D++ + +L + SQ + +Q + D Sbjct: 21 VFVTGCTGLLGSYLVKELIDQGANVTGLVRDQVPRS----NLYQGSQFEKMNVVQGALED 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I AL E++ D + + AA++ V + NI+GT+ +LE +C Q Sbjct: 77 MQTIERALGEYEIDTVFHLAAQAIVGVANRHPVSTFEANILGTWNVLE------ACRRQP 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+D+ YG ++ + EDMP N PY +K+ +D + + +TYG+PV + Sbjct: 131 LIK--RVIVASSDKAYGDQEQLPYDEDMPLNAKHPYDVSKSCADLISHTYYNTYGLPVCI 188 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--- 237 + C N YG ++IP I ++EG + DG +RD+ Y+ED V+A YL+L Sbjct: 189 TRCGNLYGGGDLNFNRIIPQTIQLVLEGEAPEIRSDGTFIRDYFYIEDAVKA-YLLLAEK 247 Query: 238 --KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +KG GE +N + +++V +I L A+ +EL I ++ H+ ++ Sbjct: 248 MEEKGLAGEAFNFSNEIQLTVLELVDKI---LKAM------GSELKPRILNQGTHEIKHQ 298 Query: 296 -IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W P +++ GL KT+ WY Sbjct: 299 YLSAEKARKLLDWKPDYSIDEGLEKTIEWY 328 >gi|23100338|ref|NP_693805.1| nucleotide sugar epimerase [Oceanobacillus iheyensis HTE831] gi|22778570|dbj|BAC14839.1| nucleotide sugar epimerase [Oceanobacillus iheyensis HTE831] Length = 340 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 159/337 (47%), Gaps = 27/337 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVDI 59 ++TG AGFIG L R L+ D V+ +D + Y NL LK + N F+F++ DI Sbjct: 9 LITGAAGFIGHFLSRRLL-DQGFNVIGLDNVNDYYDVNLKETRLKLLQPYNNFTFIKGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + S +E++P +VN AA++ V SI D ++ +N+IG + +LE R Sbjct: 68 SDKELVLSIFEEYKPSIVVNLAAQAGVRYSIENPDVYMQSNVIGFYNILEACRHHLVD-- 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYG+ K F E D NP S Y++TK S++ + + H YGIP Sbjct: 126 -------HLIYASSSSVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYGIP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGS--HVFLYGDGQN--VRDWLYVEDHVRALY 234 YGP P+ ++ G +F GD +N RD+ Y++D V + Sbjct: 179 ATGLRFFTVYGPMGRPDMAYFGFTNKLFHGEPIQIFNNGDFENDLYRDFTYIDDIVEGIE 238 Query: 235 LVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPG 289 ++ +GE YNIG +N K ++ I L L E + E +PG Sbjct: 239 RLIPHSPVGEVQHKVYNIGNSNPEK---LMVFIETLEKCLSNSLGEKVEFEKHFEPIKPG 295 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +G+ PQ ++E GL + WY++ Sbjct: 296 DVPATYASTKQLYDAVGFRPQTSIEEGLQQFTDWYVE 332 >gi|29345790|ref|NP_809293.1| nucleotide sugar epimerase [Bacteroides thetaiotaomicron VPI-5482] gi|29337683|gb|AAO75487.1| nucleotide sugar epimerase [Bacteroides thetaiotaomicron VPI-5482] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 30/343 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEISQ-SNLFSFLQ 56 ++VTG AGFIG+ L + L+N+ ++V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFIGANLVKRLLNEFDTVKVIGIDNITEYYDVRLKYERLQELSAYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I +E + S + P +VN AA++ V SI D +I +N+IG + +LE S Sbjct: 73 DSIAKKEIVESIFTNYHPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILE------S 126 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + + S+ VYG K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 127 CRHHSVE---HLVYASSSSVYGCNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + +Y G RD+ Y++D V + Sbjct: 184 NIPSTGLRFFTVYGPCGRPDMAYFSFTNKLLKGETIQIYNYGNCKRDFTYIDDIVEGIVR 243 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELI 281 +++ R GE YNIG N+ +D V + + ++P Y Sbjct: 244 IMQHAPEKRNGEDGLPVPPYKVYNIGNNSPENLLDFVTILQDELIRAGVLPNYYDFESYK 303 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D++ ++ + G+ P ++ GL K WY Sbjct: 304 ELVPMQPGDVPVTYADTTPLQQDFGFKPSTSLREGLRKFAGWY 346 >gi|260174460|ref|ZP_05760872.1| nucleotide sugar epimerase [Bacteroides sp. D2] gi|315922727|ref|ZP_07918967.1| nucleotide sugar epimerase [Bacteroides sp. D2] gi|313696602|gb|EFS33437.1| nucleotide sugar epimerase [Bacteroides sp. D2] Length = 359 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 30/343 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEIS-QSNLFSFLQ 56 ++VTG AGFIG+ L + L+ + I+V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFIGANLVKRLLAEFDSIKVIGIDSITEYYDVRLKYERLEELSVYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +I +E + SA ++P +VN AA++ V SI D +I +N+IG + +LE R + Sbjct: 73 DNIAKKEIVESAFTNYRPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILEACRHYGV 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 133 E---------HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPCGRPDMAYFSFTNKLLKGETIQVFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELI 281 ++ K G G + YNIG N+ +D V + + ++P Y Sbjct: 244 IMQHAPEKKNGDDGLPIPPYKVYNIGNNSPENLLDFVTILQDELIRAGVLPNDYDFESHK 303 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D++ ++ + G+ P ++ GL K WY Sbjct: 304 KLVSMQPGDVPVTYADTTPLEQDFGFKPSTSLRVGLRKFAEWY 346 >gi|55377831|ref|YP_135681.1| dTDP-glucose 4-6-dehydratase [Haloarcula marismortui ATCC 43049] gi|55230556|gb|AAV45975.1| dTDP-glucose 4-6-dehydratase [Haloarcula marismortui ATCC 43049] Length = 353 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/354 (29%), Positives = 158/354 (44%), Gaps = 44/354 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTG GF+GS L LV + V + T +G LN+++ Q + + D+ D+ Sbjct: 12 VFVTGADGFVGSHLVDTLV-EYGANVHTFVRATSSGELNNIRH--QRENITVHRGDLRDK 68 Query: 63 ECIRSALKEFQP---DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + AL FQ I + A++HV S E I TN+ GT LL+ S + Sbjct: 69 HSVDDALSTFQQYDDTLIFHLGAQAHVGESWDRPYETIDTNVSGTLNLLQ------SVVD 122 Query: 120 QDKKDQFRFLQISTDEVYGSLD-------------KGLFSEDMPYNPSSPYSATKASSDY 166 D D +F T E YG++ + + SE P NP+S Y+ +K ++D+ Sbjct: 123 LDL-DITKFDTAGTSEEYGNVKEEMAEKHEFEEDGRVMLSERSPVNPTSIYATSKLAADF 181 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 L + + YG+P + + NNYGP P + IT+ +E V L G+ Q RD YV Sbjct: 182 LTMNYNDAYGLPTVTTRMFNNYGPRQNPRYITGTIITQALERDIVEL-GNLQPKRDMCYV 240 Query: 227 EDHVRALYLVLKKGRIGERYNIG-GNNE--RKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D VR V G GE+Y G G N R+ + + E+G Y + + Sbjct: 241 SDGVRGHLHVALGGNPGEQYVYGYGENTSMREWTETILEVG--------SEYGYWDNPEI 292 Query: 284 IED----RPGHD--RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++D RPG + K+ + GW PQ G+ +T+ WY +N W Sbjct: 293 VQDDDRYRPGDSDVEELLVGHEKLTEKTGWEPQVTWRQGIRQTIDWYANNKRSW 346 >gi|300860675|ref|ZP_07106762.1| NAD-binding protein [Enterococcus faecalis TUSoD Ef11] gi|300849714|gb|EFK77464.1| NAD-binding protein [Enterococcus faecalis TUSoD Ef11] Length = 316 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 162/336 (48%), Gaps = 33/336 (9%) Query: 1 MR-LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + Sbjct: 1 MRNFLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNISENITFIEGSV 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 55 IDQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY----- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 --QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPT 167 Query: 180 LLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHV 230 N YGP P ++ + R++ V ++GDG+ RD+++VED V Sbjct: 168 SAVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVV 227 Query: 231 RALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 +AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 228 QALNLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 280 DIKDSLADISKLRA-IGYEPKYSIQSGLDKYVKYEL 314 >gi|315171585|gb|EFU15602.1| NAD-binding domain 4 [Enterococcus faecalis TX1342] Length = 319 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 7 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNISENITFIEGSVIDQ 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 61 QLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 114 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 173 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 174 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 233 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 234 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 286 DSLADISKLRA-IGYEPKYSIQSGLDKYVNYEL 317 >gi|298482883|ref|ZP_07001066.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. D22] gi|298271083|gb|EFI12661.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. D22] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQSNL-FSFLQ 56 ++VTG AGFIGS L L +D + I+V+ +D +T ++N LKEI N ++F++ Sbjct: 15 VLVTGAAGFIGSNLVMRLFHDFRNIRVIGVDSITDYYDVNIKYERLKEIELLNRDWTFVR 74 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D++ + E + +VN AA++ V SI D ++ +N+IG + +LE R + Sbjct: 75 ASIADKDAVERIFSEDRISVVVNLAAQAGVRYSITNPDAYVQSNLIGFYNILEACRYY-- 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 133 -------EVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 185 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 186 NIPSTGLRFFTVYGPAGRPDMAYIGFTDKLVKGETIKIFNYGNCKRDFTYVDDIVEGVVR 245 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 V++ + GE YNIG N+ +D V E + ++P Y +H Sbjct: 246 VMQHAPEKQNGEDGLPIPPYKVYNIGNNSPENLLDFVTILEEELITARVLPADYDFEAHK 305 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P N+ GL + WY Sbjct: 306 ELVPM---QPGDVPVTYADTTPLEQDFGFKPSTNLRDGLRRFAEWY 348 >gi|153808769|ref|ZP_01961437.1| hypothetical protein BACCAC_03069 [Bacteroides caccae ATCC 43185] gi|149128595|gb|EDM19813.1| hypothetical protein BACCAC_03069 [Bacteroides caccae ATCC 43185] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 30/343 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEIS-QSNLFSFLQ 56 ++VTG AGFIG+ L + L+ + I+V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFIGANLVKRLLAEFDSIKVIGIDSITEYYDVRLKYERLEELSVYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +I +E + SA ++P +VN AA++ V SI D +I +N+IG + +LE R + Sbjct: 73 DNIAKKEIVESAFTNYRPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILEACRHYGV 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 133 E---------HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPCGRPDMAYFSFTNKLLKGETIQVFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELI 281 ++ K G G + YNIG N+ +D V + + ++P Y Sbjct: 244 IMQHAPEKKNGDDGLPIPPYKVYNIGNNSPENLLDFVTILQDELIRAGVLPNDYDFESHK 303 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D++ ++ + G+ P ++ GL K WY Sbjct: 304 KLVPMQPGDVPVTYADTTPLEQDFGFKPSTSLRVGLRKFAEWY 346 >gi|237736283|ref|ZP_04566764.1| NAD-dependent epimerase/dehydratase [Fusobacterium mortiferum ATCC 9817] gi|229421631|gb|EEO36678.1| NAD-dependent epimerase/dehydratase [Fusobacterium mortiferum ATCC 9817] Length = 371 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 29/348 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 ++VTGGAGFIGS L L+ ++ I ++ ID L +++ L EI + ++ Sbjct: 11 ILVTGGAGFIGSNLILELLKTVEDINIVSIDNLNDYYDVSIKEWRLSEIEKEIKKHPNSK 70 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ DI D+ I + E++P+ VN AA++ V SI+ D +I +N+IG + +LE Sbjct: 71 YHFIKGDIADKNTIDNIFNEYKPEIAVNLAAQAGVRYSIINPDAYIQSNMIGFYNILEAC 130 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + K + S+ VYGS K +S +D NP S Y+ATK S++ + + Sbjct: 131 RHSY---DNGAKGVEHLVYASSSSVYGSNKKIPYSVDDKVDNPVSLYAATKKSNELMAHS 187 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++ + ++ G RD+ Y++D V Sbjct: 188 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFSFTNKLRNNETIEIFNYGNCKRDFTYIDDIV 247 Query: 231 RALYLVLKK---GRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 + V++K ++GE YNIG N+ +D V + L + ++PK Y+ Sbjct: 248 YGVKSVMEKVPERKVGEDGLPVPPYSIYNIGNNSPENLLDFVTILQEELLNEGILPKDYN 307 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S ++ + + P+ ++ GL K V WY Sbjct: 308 FEAHKKLVPMQPGDVPVTYADVSTLERDFNFKPKTSLRDGLRKFVRWY 355 >gi|225849959|ref|YP_002730193.1| NAD-dependent epimerase/dehydratase family protein [Persephonella marina EX-H1] gi|225646304|gb|ACO04490.1| NAD-dependent epimerase/dehydratase family protein [Persephonella marina EX-H1] Length = 334 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 106/355 (29%), Positives = 167/355 (47%), Gaps = 44/355 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNL-----F 52 ++VTG AGFIG + L+ V+ ID N+NS LKE + +L F Sbjct: 8 VLVTGAAGFIGWKTSKLLLEG-GFNVVGID------NMNSYYDVRLKEWRKKDLERYENF 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F +DI + +R FQ DA++N AA + V S+ ++ TN GT LLE Sbjct: 61 RFFHIDIENLGALRVLFDSFQFDAVLNLAARAGVRYSMENPHVYLQTNAQGTLNLLE--- 117 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 + +D + + + ST +Y F ED+P N P SPY+A+K +++ + + Sbjct: 118 -----MMKDHGIK-KMVLASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKAAEVMAYTY 170 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + YG+ + + YGP P+ I I + EG + L+GDG RD+ YV+D + Sbjct: 171 HYLYGLDITVVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIKLFGDGSQARDFTYVDDIAK 230 Query: 232 ALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L +K +G E N+GG + I + I + D L K+ IE RP H Sbjct: 231 GTVLAMK--NLGYEIINLGGG--KNPISLKSIIQKIEDLLGKKA--------VIEYRPFH 278 Query: 291 D---RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 + D K + +GW P+ +++ GL +TV WY++N W + + E N Sbjct: 279 KADMKETWADIEKAEKILGWRPEISIDEGLKRTVQWYIENREWLKDIKLEEGKQN 333 >gi|323481236|gb|ADX80675.1| NAD dependent epimerase/dehydratase family protein [Enterococcus faecalis 62] Length = 324 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L Y D QV+VID L+ + + ++ S +F++ + D+ Sbjct: 12 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLS----MGQTENLNISENITFIEGSVIDQ 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L+E+Q D I + AA + V S+ E N LLE R + + Sbjct: 66 QLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY-------Q 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 119 KDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAV 178 Query: 183 NCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P ++ + R++ V ++GDG+ RD+++VED V+AL Sbjct: 179 RFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQAL 238 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + +GE YN+G +++ + ++ +P Y E R G + Sbjct: 239 NLVAHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGDIK 290 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+++ IG+ P+ +++SGL+K V + L Sbjct: 291 DSLADISKLRA-IGYEPKYSIQSGLDKYVKYEL 322 >gi|120603628|ref|YP_968028.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] gi|120563857|gb|ABM29601.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] Length = 334 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 156/330 (47%), Gaps = 23/330 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R++VTG GFIGS L YLV ++ + + G L+SL +N+ F DI Sbjct: 5 RILVTGADGFIGSHLVEYLVRQGYSVKAFALYNSFNSWGWLDSLSPDIMNNVEVFTG-DI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E +R+A+ + A+++ AA + S D ++ TN+ GT +L+ R Sbjct: 64 RDPEGVRTAMSGCE--AVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVLQAARAL----- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + + ST EVYG+ +E+ P + SPYSATK ++D L L++ ++ PV Sbjct: 117 ----DIGKVVHTSTSEVYGTAQFVPITEEHPLHAQSPYSATKVAADQLALSFYRSFATPV 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP IT++ G+ G RD+ YV D VRA VL+ Sbjct: 173 AIIRPFNTYGPRQSARAVIPTIITQLAAGARSIKLGALTPTRDFNYVLDTVRAFEAVLQA 232 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + +G+ N G E D I ++ + + +R ++ +R +A D+ Sbjct: 233 DQSVGQVLNAGSGYEVSIEDTARMIAEIMGVSLSI---ECDEMRLRPEKSEVERLWA-DN 288 Query: 299 SKIKSEIGWFPQ----ENMESGLNKTVCWY 324 S+++ W P + GL KT+CW+ Sbjct: 289 SRLRLITEWEPAFGGLDGFRLGLEKTICWF 318 >gi|160938455|ref|ZP_02085810.1| hypothetical protein CLOBOL_03353 [Clostridium bolteae ATCC BAA-613] gi|158438828|gb|EDP16585.1| hypothetical protein CLOBOL_03353 [Clostridium bolteae ATCC BAA-613] Length = 354 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 29/345 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 ++VTG AGFIGS L + L D++ + V+ ID + Y L L E+S F F+Q Sbjct: 11 ILVTGAAGFIGSNLVKRLYKDVEDVTVIGIDNMNDYYDVRLKEARLSELSAHPSFIFVQG 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I D+E + ++++P +VN AA++ V SI+ D +I +N+IG + +LE R Sbjct: 71 SIADKELVNKVFEQYRPQIVVNLAAQAGVRYSIINPDAYIESNLIGFYNILEACR---HS 127 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYGS K +S +D NP S Y+ATK S++ A+ Y Sbjct: 128 FDDGHTPVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELTAHAYAKLYN 187 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ ++ G + ++ G RD+ Y++D V + V Sbjct: 188 IPSTGLRFFTVYGPAGRPDMAYFGFTDKLRAGKTIQIFNYGNCKRDFTYIDDIVTGVEKV 247 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSYS---HTE 279 + K IGE YNIG N+ +D V + + ++ + Y H E Sbjct: 248 MTKAPDKAIGEDGIPVPPYALYNIGNNHPENLLDFVQILSEELVRAGVLSEDYDFDVHKE 307 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D+S ++ + G+ P ++ SGL + WY Sbjct: 308 LLPM---QPGDVPVTYADTSALERDFGFKPSTDLRSGLRRFAEWY 349 >gi|157691465|ref|YP_001485927.1| NAD-dependent epimerase/dehydratase [Bacillus pumilus SAFR-032] gi|157680223|gb|ABV61367.1| NAD-dependent epimerase/dehydratase [Bacillus pumilus SAFR-032] Length = 334 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 167/330 (50%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L + L++ + LV D++ + +L + SQ + +Q + D Sbjct: 21 VFVTGCTGLLGSYLVKELIDQGANVTGLVRDQVPRS----NLYQGSQFEKMNVVQGALED 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I AL E++ D + + AA++ V + NI+GT+ +LE +C Q Sbjct: 77 MQTIERALGEYEIDTVFHLAAQAIVGVANRHPVSTFEANILGTWNVLE------ACRRQP 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+D+ YG ++ + EDMP N PY +K+ +D + + +TYG+PV + Sbjct: 131 LIK--RVIVASSDKAYGDQEQLPYDEDMPLNGKHPYDVSKSCADLISHTYYNTYGLPVCI 188 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--- 237 + C N YG ++IP I ++EG + DG +RD+ Y+ED V+A YL+L Sbjct: 189 TRCGNLYGGGDLNFNRIIPQTIQLVLEGEAPEIRSDGTFIRDYFYIEDAVKA-YLLLAEK 247 Query: 238 --KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +KG GE +N + +++V +I L A+ +EL I ++ H+ ++ Sbjct: 248 MEEKGLAGEAFNFSNEIQLTVLELVDKI---LKAM------GSELKPRILNQGTHEIKHQ 298 Query: 296 -IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W P +++ GL KT+ WY Sbjct: 299 YLSAEKARKLLDWKPDYSIDEGLEKTIEWY 328 >gi|114565797|ref|YP_752951.1| nucleoside-diphosphate-sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336732|gb|ABI67580.1| nucleoside-diphosphate-sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 310 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 49/341 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L+ + + ++ +D L+ G L ++ E + F F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKKLLAEGQ-RITALDDLS-NGRLMNIDEFRDNPDFLFIEGDIK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ ++ D + + AA +V SI ++ GTF +LEE R Sbjct: 59 DRDTLKQVFAG-GFDLVYHLAASINVQDSIDDPRTTYENDVTGTFNVLEECR-------- 109 Query: 121 DKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + L +ST VY SLD+ +E+ P P+SPY+A+K + + L L++ + YG+P Sbjct: 110 --RQNIKMLFMSTCMVYERSLDETGITEEHPVKPASPYAASKLAGEALTLSYYYAYGLPT 167 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ N YGP+ ++ + I R + G + +YGDG RD LYVED V Sbjct: 168 VVVRPFNTYGPFQKSSGEGGVVAIFIQRELAGEELNIYGDGTQTRDLLYVEDCAD---FV 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA- 295 ++ GR + R N G LL+A + + S L R I G R A Sbjct: 225 VRAGR----------DSRAN-------GQLLNAGLGRDVSINGLARMIGGDAGRIRHVAH 267 Query: 296 -----------IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + K + + W P+ ++E GL +T W + Sbjct: 268 IHPQSEIPKLLCNYDKARELLDWQPRVSLEEGLQRTREWMI 308 >gi|114566248|ref|YP_753402.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337183|gb|ABI68031.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 323 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 100/338 (29%), Positives = 164/338 (48%), Gaps = 34/338 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVD 58 +IVTG AGFIGS + + L+ V+ ID L ++ L + + N F D Sbjct: 4 VIVTGAAGFIGSKVSKELLKQ-GYTVIGIDNLNDYYDVQIKYWRLATLKEENKFVLYTAD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E IR K QPDA++N AA + V S+ ++TTN GT LLE + + Sbjct: 63 VENIEAIRFIFKFHQPDAVINLAARAGVRYSMENPHIYMTTNAHGTLNLLELCKEF---- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 +F+ ST +Y + F E++P N P SPY+A+K +++ + + + YG+ Sbjct: 119 -----GVRKFVLASTSSLYAGQEMP-FKEELPVNTPISPYAASKKAAEMMAYTYHYLYGL 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + + YGP P+ I I ++EG+ + ++GDG RD+ YV+D R L L Sbjct: 173 DITVFRYFTVYGPAGRPDMSIFRFIKWIMEGTPLQVFGDGSQRRDFTYVDDIARGTVLGL 232 Query: 238 KKGRIG-ERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 K +G E N+G +N K I+++ E + TE I++ E Sbjct: 233 KP--MGYEIINLGNSNPDTLSKTIELIEEY----------TGKKTE-IQYKEFHKADISA 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + SK ++ +GW + N+ G+ +TV W + +NW W Sbjct: 280 TWANISKAQNLLGWQAKTNLPEGIKRTVQW-MKDNWEW 316 >gi|34764228|ref|ZP_00145083.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886002|gb|EAA23323.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 162 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 12/141 (8%) Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF 261 I ++EG + +YG G NVRDWLYVEDH + + LVL++ + E YNIGG NE KNI+IV Sbjct: 2 IKNILEGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLREAKPREIYNIGGFNEEKNINIVK 61 Query: 262 EIGFLLDALIPKSYSHT------------ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 + +L I + + +LI +++DR GHD RYAI+ SKI ++GW+P Sbjct: 62 LVIDILKEEITNNDEYKKVLKTDISNISYDLITYVQDRLGHDMRYAINPSKIAKDLGWYP 121 Query: 310 QENMESGLNKTVCWYLDNNWW 330 + + E+G+ KTV WYL+N W Sbjct: 122 ETDFETGIRKTVKWYLENQDW 142 >gi|255282341|ref|ZP_05346896.1| UDP-glucuronate 5'-epimerase [Bryantella formatexigens DSM 14469] gi|255267289|gb|EET60494.1| UDP-glucuronate 5'-epimerase [Bryantella formatexigens DSM 14469] Length = 363 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 99/355 (27%), Positives = 168/355 (47%), Gaps = 43/355 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS----------LKEIS----- 47 +++TG AGFIG+ L L++D I +L N+N LKEI Sbjct: 13 ILITGAAGFIGANLVLTLLSDNTIHT----RLIGVDNMNDYYDVSIKEWRLKEIQTVAEK 68 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 ++ ++F++ I D+E I S + + PD +VN AA++ V SI +D +I +N+IG + + Sbjct: 69 STSSWTFIKGSIADKELINSIINTYHPDIVVNLAAQAGVRYSITNSDVYIESNLIGFYNI 128 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDY 166 LE R + +K + S+ VYG+ K +S +D NP S Y+ATK S++ Sbjct: 129 LEACRHSY---DNGEKRVEHLVYASSSSVYGANKKVPYSTDDKVDNPVSLYAATKKSNEL 185 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 L A+ Y IP YGP P+ ++++G + ++ G RD+ YV Sbjct: 186 LAHAYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGEKIQIFNYGNCKRDFTYV 245 Query: 227 EDHVRALYLVLKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIP 272 +D V + V+ RIGE YNIG + +D V + + ++P Sbjct: 246 DDIVEGVKRVMMGAPERRIGEDGLPVPPYAIYNIGNSQPENLLDFVQILSEELVRAEVLP 305 Query: 273 KSY---SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + Y +H EL+ +PG D+S ++ + G+ P ++ +G+ + WY Sbjct: 306 EDYDFEAHKELVPM---QPGDVPVTYADTSALERDFGFKPSTDLRTGIRRFAEWY 357 >gi|303231105|ref|ZP_07317845.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514236|gb|EFL56238.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 364 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 29/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKE---------ISQSNLF 52 +++TG AGF+G+ L L N+++ +++ +D + ++ SLKE + N + Sbjct: 13 ILITGAAGFVGANLVMSLFNNIENSLIIGVDSVNDYYDV-SLKEYRLQQIVSSVKHDNQW 71 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+E ++S ++PD +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 72 IFKKGNIADKEFLQSIFDGYKPDVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILECCR 131 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + K + S+ VYGS K +S +D NP S Y+ATK S++ L ++ Sbjct: 132 HSY---DNGAKGVEHLVYASSSSVYGSNKKIPYSTDDQVDNPVSLYAATKKSNELLAYSY 188 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + +G + ++ G RD+ Y++D V Sbjct: 189 AKLYNIPCTGLRFFTVYGPAGRPDMAYFGFTNTLCKGEVIKIFNYGNCKRDFTYIDDIVE 248 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 +Y V+ + G G YNIG N+ +D V +G + ++P ++ Sbjct: 249 GVYKVMQVAPERRNGADGLPVPPYAIYNIGNNSPENLLDFVTILGEELIGAGVLPADFNM 308 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D+S ++++ G+ P + GL + WY D Sbjct: 309 ERHKELVPMQPGDVPITYADTSALEADFGFKPSTTLREGLRRFAIWYKD 357 >gi|325677978|ref|ZP_08157619.1| UDP-glucuronate 5'-epimerase [Ruminococcus albus 8] gi|324110310|gb|EGC04485.1| UDP-glucuronate 5'-epimerase [Ruminococcus albus 8] Length = 345 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 160/349 (45%), Gaps = 40/349 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLT--YAGNLNS--LKEISQSNL-----FS 53 IVTG AGFIGS L L + L ++ +D + Y +L L +I Q+ F Sbjct: 5 IVTGAAGFIGSNLVTKLFSILDGACIIGLDNMNDYYDVSLKEYRLSQIEQTQAKSKCSFK 64 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F++ D+ D+E I E++PD +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 65 FIRGDLADKELIDKLFNEYKPDIVVNLAAQAGVRYSIENPDAYINSNIIGFYNILEACRH 124 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 + + S+ VYG K FS +DM +P S Y+ATK S++ L A+ Sbjct: 125 YPVE---------HLIYASSSSVYGGNKKVPFSTDDMVDHPVSLYAATKKSNELLAHAYS 175 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y IP YG P+ +++ G + +Y G RD+ YV+D V Sbjct: 176 KLYNIPTTGLRFFTVYGSAGRPDMAYFGFTNKLVNGETIKIYNYGNCKRDFTYVDDIVEG 235 Query: 233 LYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSY--- 275 + V+ K G G YNIGG +D V + + ++P Y Sbjct: 236 IMRVMQCPPEKKNGDDGLPIPPYALYNIGGGRPENLLDFVQILSEELVRAGVLPADYDFE 295 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +H EL+ +PG DSS ++ + G+ P ++ +GL K WY Sbjct: 296 AHKELVPM---QPGDVPVTYADSSALERDFGFKPTIDLRTGLRKIAEWY 341 >gi|15606538|ref|NP_213918.1| nucleotide sugar epimerase [Aquifex aeolicus VF5] gi|2983750|gb|AAC07310.1| nucleotide sugar epimerase [Aquifex aeolicus VF5] Length = 321 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 28/337 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AG IG + L+ +V+ +D L Y L L+++ + F F + Sbjct: 1 MNILVTGCAGLIGWKVSEKLLEHGH-RVIGVDNLNSYYDPRLKEYRLEQLKKFENFKFYK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V+I +RE +R +EF+ DA++N AA + V SI + TTN +G LLE + + Sbjct: 60 VNIENREALRILFQEFEFDAVINEAARAGVRYSIQNPHIYFTTNTLGNLNLLELMKEFGV 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + ST +Y F E++P N P SPY+A+K +++ + + Y Sbjct: 120 K---------KLILASTSSLYAG-QPMPFKEELPVNTPISPYAASKKAAEVTAYTYHYLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI V++ YG P+ + I + ++G + +YGDG RD+ YV+D A Sbjct: 170 GIDVVILRYFTVYGLAGRPDMAVFNFIYKTLKGIPIKVYGDGSQKRDFTYVDDVAEATVK 229 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L KG E N+G N R +++ LI K + + + R Sbjct: 230 ALNLKGY--EIINVGNNKPRALKELI--------ELIEKYTGKEVKVEYGDFHKADMRDT 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D +K K +GW P+ ++E G+ KTV W+L+ NW W Sbjct: 280 WADITKAKRLLGWEPKTSLEEGVKKTVEWFLE-NWDW 315 >gi|31794957|ref|NP_857450.1| dTDP-glucose 4,6-dehydratase RfbB [Mycobacterium bovis AF2122/97] gi|57117156|ref|YP_178015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Rv] gi|121639701|ref|YP_979925.1| putative dTDP-glucose 4,6-dehydratase rfbB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663652|ref|YP_001285175.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148824991|ref|YP_001289745.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis F11] gi|167970947|ref|ZP_02553224.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|215405839|ref|ZP_03418020.1| hypothetical protein Mtub0_19543 [Mycobacterium tuberculosis 02_1987] gi|215413713|ref|ZP_03422381.1| hypothetical protein Mtub9_20155 [Mycobacterium tuberculosis 94_M4241A] gi|215432765|ref|ZP_03430684.1| hypothetical protein MtubE_19368 [Mycobacterium tuberculosis EAS054] gi|215448131|ref|ZP_03434883.1| hypothetical protein MtubT_20082 [Mycobacterium tuberculosis T85] gi|218755569|ref|ZP_03534365.1| hypothetical protein MtubG1_20034 [Mycobacterium tuberculosis GM 1503] gi|224992196|ref|YP_002646886.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800832|ref|YP_003033834.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 1435] gi|254366331|ref|ZP_04982375.1| hypothetical dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis str. Haarlem] gi|254552899|ref|ZP_05143346.1| hypothetical protein Mtube_21052 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260202989|ref|ZP_05770480.1| hypothetical protein MtubK8_01537 [Mycobacterium tuberculosis K85] gi|289572436|ref|ZP_06452663.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis K85] gi|289747626|ref|ZP_06507004.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis 02_1987] gi|289755917|ref|ZP_06515295.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289759950|ref|ZP_06519328.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T85] gi|289763968|ref|ZP_06523346.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294995302|ref|ZP_06800993.1| hypothetical protein Mtub2_12523 [Mycobacterium tuberculosis 210] gi|297636466|ref|ZP_06954246.1| hypothetical protein MtubK4_20175 [Mycobacterium tuberculosis KZN 4207] gi|297733460|ref|ZP_06962578.1| hypothetical protein MtubKR_20315 [Mycobacterium tuberculosis KZN R506] gi|298527258|ref|ZP_07014667.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306778146|ref|ZP_07416483.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu001] gi|306778678|ref|ZP_07417015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu002] gi|306786700|ref|ZP_07425022.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu003] gi|306791067|ref|ZP_07429389.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu004] gi|306791386|ref|ZP_07429688.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu005] gi|306795451|ref|ZP_07433753.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu006] gi|306801426|ref|ZP_07438094.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu008] gi|306805632|ref|ZP_07442300.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu007] gi|306970028|ref|ZP_07482689.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu009] gi|306974262|ref|ZP_07486923.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu010] gi|307081970|ref|ZP_07491140.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu011] gi|307086584|ref|ZP_07495697.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu012] gi|313660791|ref|ZP_07817671.1| hypothetical protein MtubKV_20310 [Mycobacterium tuberculosis KZN V2475] gi|31620555|emb|CAD95999.1| POSSIBLE DTDP-GLUCOSE 4,6-DEHYDRATASE RFBB [Mycobacterium bovis AF2122/97] gi|38490380|emb|CAE55640.1| POSSIBLE dTDP-GLUCOSE 4,6-DEHYDRATASE [Mycobacterium tuberculosis H37Rv] gi|121495349|emb|CAL73836.1| Possible dTDP-glucose 4,6-dehydratase rfbB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151843|gb|EBA43888.1| hypothetical dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis str. Haarlem] gi|148507804|gb|ABQ75613.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148723518|gb|ABR08143.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis F11] gi|224775312|dbj|BAH28118.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322336|gb|ACT26939.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 1435] gi|289536867|gb|EFD41445.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis K85] gi|289688154|gb|EFD55642.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis 02_1987] gi|289696504|gb|EFD63933.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289711474|gb|EFD75490.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715514|gb|EFD79526.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T85] gi|298497052|gb|EFI32346.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213667|gb|EFO73066.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu001] gi|308328400|gb|EFP17251.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu002] gi|308328804|gb|EFP17655.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu003] gi|308332647|gb|EFP21498.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu004] gi|308340139|gb|EFP28990.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu005] gi|308344125|gb|EFP32976.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu006] gi|308347927|gb|EFP36778.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu007] gi|308351795|gb|EFP40646.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu008] gi|308352578|gb|EFP41429.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu009] gi|308356530|gb|EFP45381.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu010] gi|308360478|gb|EFP49329.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu011] gi|308363996|gb|EFP52847.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu012] gi|326905624|gb|EGE52557.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis W-148] gi|328460560|gb|AEB05983.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 4207] Length = 326 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGF GS L L+ + V V+DK + + +++ + +F+ + Sbjct: 1 MEILVTGGAGFQGSHLTESLLANGH-WVTVLDK-SSRNAVRNMQGFRSHDRAAFISGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 59 DGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN---- 112 Query: 121 DKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG Sbjct: 113 ------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V + N +G + LIP + + I G + ++G G RD+LYV D V A Sbjct: 167 LDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAY 226 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LVL+ + G+ N + + DIV + A I + RPG + Sbjct: 227 NLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQ 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ D S KS IG+ PQ + G+++ + W D + Sbjct: 277 RFPADISLAKS-IGFQPQVEIWDGIDRYINWAKDQPQY 313 >gi|297526827|ref|YP_003668851.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255743|gb|ADI31952.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 317 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 158/330 (47%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L + +V+V+D L Y G+ ++L I + ++ DI D Sbjct: 8 VLVTGGAGFIGSWTVEKLCSK-GYRVVVLDNLMY-GSPSNLSNIIDDIIL--VKGDIRDT 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++++ +V+ AA VD + + N+ GTF LLE +R + Sbjct: 64 VLLNELFRKYRFYGVVHLAALVGVDEVYRDPNSGFSINVQGTFNLLEMSR---------R 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D RF+ S+ VYG ED P +P + Y ATK + + LV + YG+ + Sbjct: 115 HDVERFVYASSAAVYGDPQYLPIDEDHPLSPKNLYGATKLAGEILVNTYMENYGLSTISL 174 Query: 183 NCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP P ++ + I +I G + ++GDG RD++YVED V A L+ + Sbjct: 175 RYFNVYGPRMRPGPYSGVVYVFINNLIHGKPLIIHGDGLQTRDFVYVED-VAAANLLALE 233 Query: 240 GRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--GHDRRYAI 296 +I YNIG G+N + L D L + Y E + I D+P G + Sbjct: 234 SKITGSYNIGCGSN--------ITVRELADIL--RKYMGREEVEIIHDKPREGDIKHSLA 283 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D K +GW P ++E GL KT+ +Y D Sbjct: 284 DIGKAVKYLGWKPTVSLEKGLKKTIEYYKD 313 >gi|294794174|ref|ZP_06759310.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|294454504|gb|EFG22877.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 306 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 164/327 (50%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGGAGFIGS L L+ D V VID L Y GN KE S F+++DI Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGH-TVQVIDNL-YTGN----KEFVHSKA-QFVELDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S L+EF+PD I + AA++ V S+ N+IG LL + Sbjct: 54 DPK-LYSVLEEFRPDYIFHEAAQTEVSTSMSDPMLDCDINLIGLINLLN---------AA 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D +FL S+ VYG+LD +E+M NPSS Y TK ++++ + + +G+P + Sbjct: 104 VKLDVKKFLMPSSAAVYGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYI 163 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN +GP +I + +++GS + +YGDG+ RD++YV+D V A L + Sbjct: 164 CYRYSNVFGPRQGNGGEGGVISIFAKAIVQGSPIIIYGDGKQTRDFIYVDDVVEANILGM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G YN+ + I + L+D S E++ + + R G R + Sbjct: 224 QHQVTG-IYNV-------STGISSSVNLLVDEFRNISGKDIEVV-YDKPRLGDIRDSVLA 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + E+ + + N+ GL KT ++ Sbjct: 275 TDKSEKELLFTAKYNLHDGLIKTYEYF 301 >gi|91762324|ref|ZP_01264289.1| dTDPglucose 4,6-dehydratase [Candidatus Pelagibacter ubique HTCC1002] gi|91718126|gb|EAS84776.1| dTDPglucose 4,6-dehydratase [Candidatus Pelagibacter ubique HTCC1002] Length = 345 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 162/330 (49%), Gaps = 19/330 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVND--LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M++ + G F+G++ Y+ N I+++ + + + + F F ++D Sbjct: 17 MKIFIIGSNSFMGNSFINYIYNRNYTNIKIIGASRTNQNNLNLNSNMLFKKKNFKFFKID 76 Query: 59 IC-DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + + LK+ +P+ I NFAA+S V S ++ TN++ LL+ + Sbjct: 77 LNKDLKKLILILKKEKPNIIYNFAAQSIVQNSWDAPLDWYKTNLLSNVKLLDYLK----- 131 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + D D +++Q ST EVYGS KG E Y PS+PY+++KAS D + Y Sbjct: 132 -NVDYLD--KYIQSSTPEVYGST-KGKIIESFNYFPSTPYASSKASIDMYLKNLFDNYKF 187 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL + SN YGP KLIP A+ ++ G + L G G + R ++Y +D AL + Sbjct: 188 PVLFTRASNIYGPGQKIYKLIPKALISIMLGKKIKLDGGGLSKRSFIYSDDVSSALMKIN 247 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+ GE Y+I DIV I L+ + + +RPG D Y + Sbjct: 248 SKGKAGEIYHITNEKMHTIKDIVKIICKNLNV------EFEDFTQIATERPGKDFSYNMS 301 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S KIK +IGW P+ N+ G++ T W ++N Sbjct: 302 SKKIK-KIGWKPEANIFFGIDHTKSWIMNN 330 >gi|261855245|ref|YP_003262528.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] gi|261835714|gb|ACX95481.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] Length = 334 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 27/329 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSFLQVD 58 R +VTG GFIGS L LV+ + + L + N L++++ + + D Sbjct: 11 RALVTGADGFIGSHLVEMLVS----RGYTVRALAQYNSFNHWGWLEDVAYKDAIEVVAGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D R +K+ D + + AA + S + D ++ TN+ GT + C Sbjct: 67 IRDAHFCRHMMKDV--DVVFHLAALIAIPYSYIAPDSYVDTNVRGTLNV---------CQ 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST EVYG+ E P P SPYSA+K +D + ++ +++ +P Sbjct: 116 AALDAGVKRVIHTSTSEVYGTARYVPIDEKHPLQPQSPYSASKIGADAIAQSFQNSFSLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 + ++ N YGP +IP I+++ G GD RD+ YVED R + L Sbjct: 176 LTVARPFNTYGPRQSARAVIPTIISQIASGKQRIELGDLSPTRDFNYVEDTCRGFIALAE 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI- 296 +GE NIG N E D + I L+ + I + + RP + + + Sbjct: 236 SDATVGEVVNIGSNFEISIGDTLHLIRELMGSDIEVVHDDQRV------RPANSEVFRLW 289 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+SKI S G+ P+ ++ GL +T+ W+ Sbjct: 290 CDNSKIHSLTGFKPEVDIRQGLARTIDWF 318 >gi|257893578|ref|ZP_05673231.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,408] gi|260560511|ref|ZP_05832685.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium C68] gi|261209028|ref|ZP_05923433.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium TC 6] gi|289565160|ref|ZP_06445612.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium D344SRF] gi|293563595|ref|ZP_06678041.1| nucleoside-diphosphate-sugar epimerase [Enterococcus faecium E1162] gi|314939864|ref|ZP_07847073.1| NAD-binding domain 4 [Enterococcus faecium TX0133a04] gi|314942388|ref|ZP_07849232.1| NAD-binding domain 4 [Enterococcus faecium TX0133C] gi|314950017|ref|ZP_07853310.1| NAD-binding domain 4 [Enterococcus faecium TX0082] gi|314952591|ref|ZP_07855585.1| NAD-binding domain 4 [Enterococcus faecium TX0133A] gi|314993240|ref|ZP_07858617.1| NAD-binding domain 4 [Enterococcus faecium TX0133B] gi|314996202|ref|ZP_07861264.1| NAD-binding domain 4 [Enterococcus faecium TX0133a01] gi|257829957|gb|EEV56564.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,408] gi|260073513|gb|EEW61841.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium C68] gi|260077067|gb|EEW64789.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium TC 6] gi|289162981|gb|EFD10829.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium D344SRF] gi|291604445|gb|EFF33933.1| nucleoside-diphosphate-sugar epimerase [Enterococcus faecium E1162] gi|313589633|gb|EFR68478.1| NAD-binding domain 4 [Enterococcus faecium TX0133a01] gi|313592260|gb|EFR71105.1| NAD-binding domain 4 [Enterococcus faecium TX0133B] gi|313595292|gb|EFR74137.1| NAD-binding domain 4 [Enterococcus faecium TX0133A] gi|313598832|gb|EFR77677.1| NAD-binding domain 4 [Enterococcus faecium TX0133C] gi|313640869|gb|EFS05449.1| NAD-binding domain 4 [Enterococcus faecium TX0133a04] gi|313643664|gb|EFS08244.1| NAD-binding domain 4 [Enterococcus faecium TX0082] Length = 315 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 34/334 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L YL + V+VID L+ N + +S +F++ D+ D+ Sbjct: 5 LITGGAGFIGSTLANYLGKE--NNVVVIDDLSMGKKEN----LDESKHITFIEGDVADKN 58 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +KE+ D I + AA + V S+ E N +LLE R + S L Sbjct: 59 LMEKVMKEYHFDYIFHLAAVASVADSVERPLETHRVNFDSALLLLELVRKYQSGLK---- 114 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 115 ---RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTSAVR 171 Query: 184 CSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P I+ ++ E + L+GDG RD++Y+ED ++AL Sbjct: 172 FFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKTEFTLFGDGSQSRDFVYIEDVIQALL 231 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDR 292 LV K+ + +G+++N+G ++++ I +L TEL +++ +R G R Sbjct: 232 LVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSGDIR 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SKI+S +G+ P+ ++ +G+ + + +D Sbjct: 283 DSLADISKIRS-LGYQPKFDILNGMERYLKTEID 315 >gi|71083246|ref|YP_265965.1| dtdpglucose 4,6-dehydratase [Candidatus Pelagibacter ubique HTCC1062] gi|71062359|gb|AAZ21362.1| dTDPglucose 4,6-dehydratase [Candidatus Pelagibacter ubique HTCC1062] Length = 329 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 162/330 (49%), Gaps = 19/330 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVND--LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M++ + G F+G++ Y+ N I+++ + + + + F F ++D Sbjct: 1 MKIFIIGSNSFMGNSFINYIYNRNYTNIKIIGASRTNQNNLNLNSNMLFKKKNFKFFKID 60 Query: 59 IC-DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + + LK+ +P+ I NFAA+S V S ++ TN++ LL+ + Sbjct: 61 LNKDLKKLILILKKEKPNIIYNFAAQSIVQNSWDAPLDWYKTNLLSNVKLLDYLK----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + D D +++Q ST EVYGS KG E Y PS+PY+++KAS D + Y Sbjct: 116 -NVDYLD--KYIQSSTPEVYGST-KGKIIESFNYFPSTPYASSKASIDMYLKNLFDNYKF 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PVL + SN YGP KLIP A+ ++ G + L G G + R ++Y +D AL + Sbjct: 172 PVLFTRASNIYGPGQKIYKLIPKALISIMLGKKIKLDGGGLSKRSFIYSDDVSSALMKIN 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG+ GE Y+I DIV I L+ + + +RPG D Y + Sbjct: 232 SKGKAGEIYHITNEKMHTIKDIVKIICKNLNV------EFEDFTQIATERPGKDFSYNMS 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S KIK +IGW P+ N+ G++ T W ++N Sbjct: 286 SKKIK-KIGWKPEANIFFGIDHTKSWIMNN 314 >gi|28377974|ref|NP_784866.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] gi|28270808|emb|CAD63713.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] Length = 315 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 163/326 (50%), Gaps = 31/326 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L +LV++ + V+V+D L+ G+L+++K + ++ D+ Sbjct: 1 MKALVTGGAGFIGSHLVDHLVSE-GLDVVVVDNLS-MGDLHNIKYQDEVTIYV---EDVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + ++ L+E +PD I AA + V SI E + N F +LE R + Q Sbjct: 56 NEKFMQQLLQEERPDYIYFLAAVASVADSIERPAETHSVNQTAVFNMLEYIRKTNLPIKQ 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG+L + ED +P SPY+ K +++ VLA+G Y +P + Sbjct: 116 -------FLFTSSAAVYGNLPELPKKEDSRVDPLSPYAIDKYATERFVLAYGELYDLPTV 168 Query: 181 LSNCSNNYGPYHFPEKL---IPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P + +T + F LYGDG RD++YVED ++AL+L+ Sbjct: 169 CVRFFNVYGPGQNPSSPYSGVLSILTDCLNNKKPFTLYGDGSQTRDFVYVEDVIQALWLI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD---RR 293 K E +NI NE L+A+I E I+ PG + +R Sbjct: 229 TKSDTEHEVFNIANGNEAS-----------LNAIIETYEKVAETSLQIKKAPGREGEVKR 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNK 319 + K+ ++G+ + ++E+GL+K Sbjct: 278 SVANIGKL-IKLGYTTKWSLEAGLSK 302 >gi|289556051|ref|ZP_06445261.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 605] gi|289440683|gb|EFD23176.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 605] Length = 351 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGF GS L L+ + V V+DK + + +++ + +F+ + Sbjct: 26 MEILVTGGAGFQGSHLTESLLANGH-WVTVLDK-SSRNAVRNMQGFRSHDRAAFISGSVT 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 84 DGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN---- 137 Query: 121 DKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG Sbjct: 138 ------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYG 191 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V + N +G + LIP + + I G + ++G G RD+LYV D V A Sbjct: 192 LDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAY 251 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LVL+ + G+ N + + DIV + A I + RPG + Sbjct: 252 NLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQ 301 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ D S KS IG+ PQ + G+++ + W D + Sbjct: 302 RFPADISLAKS-IGFQPQVEIWDGIDRYINWAKDQPQY 338 >gi|288917880|ref|ZP_06412240.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288350669|gb|EFC84886.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 322 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 25/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS + ++ D V+ +D L+ +G + +L + FSF + DI Sbjct: 1 MRILVTGAAGFIGSTVVDRMLADGH-SVVGLDDLS-SGRMENLAQAGSDARFSFEKGDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +PD + + AA+ V S+ N++GT +LE RL + Sbjct: 59 -ATGLTDFVARVRPDVVAHLAAQIDVRVSVADPLRDARLNVLGTINVLEAARLAGAS--- 114 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YG+ SE + +P SPY+A KA+ + + + TYG+ Sbjct: 115 ------KVIHTSSGGSIYGTPAVLPVSEAVAPSPESPYAAGKAAGELYLNVYRATYGLAS 168 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-L 235 N +GP P ++ + T ++EG ++GDG RD++YV D A Sbjct: 169 TALALGNVFGPRQDPHGEAGVVAIFGTALLEGRPTKIFGDGTTSRDYVYVADVADAFARC 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 V + G R NIG E D+ + L+ +P +F RPG +R A Sbjct: 229 VPAEAANGLRLNIGTAVETTVRDLHSRVARLVG--VPDDP------QFAAPRPGELQRIA 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 +D + + IGW PQ ++++GL T+ W Sbjct: 281 LDVALAQRAIGWHPQISLDAGLGHTIDW 308 >gi|168334404|ref|ZP_02692583.1| NAD-dependent epimerase/dehydratase [Epulopiscium sp. 'N.t. morphotype B'] Length = 326 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 101/339 (29%), Positives = 145/339 (42%), Gaps = 29/339 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQS--NLFSFLQ 56 + IVTG GFIGS LC LV + K + Y + NS L I + N Sbjct: 3 KTIVTGADGFIGSHLCEKLVKEGK----KVKAFVYYNSFNSWGWLDTIDEKVKNEIEIFA 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R AL D + + AA + S + ++ TNI GT +L+ + Sbjct: 59 GDIRDSNGVRVALTGM--DXVYHLAALIAIPFSYHSPESYVDTNIKGTLNILQAAK---- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D R L ST EVYG+ D E P+ SPYSATK ++D L ++ ++ Sbjct: 113 -----NLDLSRVLITSTSEVYGTADYVPIDEKHPFKAQSPYSATKIAADRLAESFYRSFN 167 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV + N YGP +IP IT+++ G V G RD+ YV+D + Sbjct: 168 LPVTIVRPFNAYGPRQSARAVIPTIITQLLAGKEVIKLGALSPTRDFNYVKDIADGFVAI 227 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RR 293 + IGE NI E I I L+ + P + E R RP R Sbjct: 228 ANSDQTIGEEINIATERE---ISIEGLAKELISQINPTATIICESERM---RPAKSEVER 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + KIK+ W PQ GL++T+ W+ N ++ Sbjct: 282 LLGSNEKIKALTDWEPQYTFAQGLHETIEWFKQNTAGYK 320 >gi|323706346|ref|ZP_08117911.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534308|gb|EGB24094.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] Length = 328 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 23/336 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L LV ++ +V + N L++ + + DI + Sbjct: 7 KVLVTGAGGFIGSHLVERLV-EIGAKVKAFVRYNSNNNWGWLEKSKYKDEIEIYRGDIRE 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R A+K D + + AA + S + +I TNI GT+ +L+ R Sbjct: 66 YDSVRDAMKGV--DVVFHLAALIGIPYSYVSPLAYIKTNIEGTYNVLQSAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + D R + ST EVYG+ E P P SPYSATK S+D + L++ +++ +PV + Sbjct: 115 ELDIERVIHTSTSEVYGTARYIPIDELHPLQPQSPYSATKISADNMALSFYNSFDLPVTI 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N YGP +IP IT+++ G G+ RD +V+D V + + Sbjct: 175 VRPFNTYGPRQSARAVIPTIITQILTGKKQINLGNLSPTRDLNFVKDTVNGFIKIAECDE 234 Query: 242 -IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHD--RRYAID 297 IG NIG NE IG L D + E+++ + RP R + Sbjct: 235 LIGNVTNIGSGNE-------ISIGALADMIAKLMGVDIEIVQEKQRLRPNKSEVERLICN 287 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + KIK W P ++E GL +T+ W N ++P Sbjct: 288 NDKIKKYTDWNPGYSLEDGLKETIEWIRANISLYKP 323 >gi|15843407|ref|NP_338444.1| hypothetical protein MT3893 [Mycobacterium tuberculosis CDC1551] gi|254233278|ref|ZP_04926604.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C] gi|13883774|gb|AAK48258.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|124603071|gb|EAY61346.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C] gi|323717651|gb|EGB26853.1| hypothetical protein TMMG_00278 [Mycobacterium tuberculosis CDC1551A] Length = 712 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGF GS L L+ + V V+DK + + +++ + +F+ + Sbjct: 1 MEILVTGGAGFQGSHLTESLLANGH-WVTVLDK-SSRNAVRNMQGFRSHDRAAFISGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 59 DGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN---- 112 Query: 121 DKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG Sbjct: 113 ------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V + N +G + LIP + + I G + ++G G RD+LYV D V A Sbjct: 167 LDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAY 226 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LVL+ + G+ N + + DIV + A I + RPG + Sbjct: 227 NLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQ 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ D S KS IG+ PQ + G+++ + W D + Sbjct: 277 RFPADISLAKS-IGFQPQVEIWDGIDRYINWAKDQPQY 313 >gi|1332612|emb|CAA66416.1| dNDP-glucose dehydratase [Streptomyces olivaceus] Length = 166 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 107/175 (61%), Gaps = 11/175 (6%) Query: 11 FIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALK 70 F+ + L L + QV V+D LTY+GN +L ++ ++F++ DI D + A++ Sbjct: 3 FVRALLSEELPSGKGAQVTVLDNLTYSGNEANLAPVADKPGYTFVRGDIRDYAVVDDAMR 62 Query: 71 EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ 130 DA+V+FAAES RSIL + F+T +++GT +LL+ + + RF+ Sbjct: 63 --GQDAVVHFAAESTWHRSILDSSPFVTAHVLGTQVLLDAPK---------RHGVGRFVH 111 Query: 131 ISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 +STDEVYGS+ +G ++ED P +SPYSA+KA SD L L++ T+G+ V+++ CS Sbjct: 112 VSTDEVYGSISEGSWTEDWPLALNSPYSASKAGSDLLALSYHRTHGMDVVVTRCS 166 >gi|332523578|ref|ZP_08399830.1| NAD dependent epimerase/dehydratase family protein [Streptococcus porcinus str. Jelinkova 176] gi|332314842|gb|EGJ27827.1| NAD dependent epimerase/dehydratase family protein [Streptococcus porcinus str. Jelinkova 176] Length = 355 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 100/354 (28%), Positives = 166/354 (46%), Gaps = 42/354 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLT----------YAGNLNSLKEISQSN 50 +++VTG AGFIGS L L+ + + ++ +D + +N+L + S+S Sbjct: 9 KILVTGAAGFIGSNLVLELLKEEHVGHIIGLDNMNDYYDVSLKEFRLNQINNLAKTSKSK 68 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 ++F++ I DR + ++PD +VN AA++ V SI D +I +NIIG + +LE Sbjct: 69 -WTFIKGSIADRTLVDDIFTTYKPDIVVNLAAQAGVRYSISHPDIYIESNIIGFYNILEA 127 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYGS K +S ED +P S Y+ATK S++ L Sbjct: 128 CR---------HNPVEHLVYASSSSVYGSNAKIPYSTEDKVDSPVSLYAATKKSNELLAH 178 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ Y IP YGP P+ ++I+G + ++ G RD+ YV+D Sbjct: 179 SYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLIKGETIQIFNYGNCKRDFTYVDDI 238 Query: 230 VRALYLVLK---KGRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY 275 V+ + LV+ K GE YNIG ++ +D V + + ++P +Y Sbjct: 239 VKGITLVMNGAPKRSQGEDGLPIPPYAIYNIGNSHPENLLDFVTILQEELIAAGVLPHNY 298 Query: 276 ---SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 SH EL+ +PG D+S ++ E G+ P ++ GL + WY D Sbjct: 299 DFESHKELVAM---QPGDVAVTYADTSALEKEFGYTPNTSLRQGLKQFAEWYYD 349 >gi|283954940|ref|ZP_06372453.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283793550|gb|EFC32306.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 330 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 34/339 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 11 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSTFLKDMEVISGDL 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 67 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 118 --KNEISHFIHTSTSEVYGTALYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 175 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 176 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLSL 235 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +L++ ++ I+D RP H R Sbjct: 236 KHFGEVYNIGSGVEHSMQEVLDLIQKILNS----------KVKIIQDKQRLRPKHSEVFR 285 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 DSSK+K W + ++E GL +++ ++ +N ++ Sbjct: 286 LCCDSSKLKKATNWQSKISLEEGLKQSIEYFKENLQAYK 324 >gi|29346010|ref|NP_809513.1| nucleotide sugar epimerase [Bacteroides thetaiotaomicron VPI-5482] gi|29337904|gb|AAO75707.1| nucleotide sugar epimerase [Bacteroides thetaiotaomicron VPI-5482] Length = 354 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEISQ-SNLFSFLQ 56 ++VTG AGFIG+ L + L+N+ ++V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFIGANLVKRLLNEFDSVKVIGIDSITEYYDVRLKYERLQELSAYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I +E + S + P +VN AA++ V SI D +I +N+IG + +LE S Sbjct: 73 DSIAKKEIVESIFTNYHPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILE------S 126 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 127 CRHHSVE---HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++ EG + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPCGRPDMAYFGFTNKLREGKTIQIFNYGNCKRDFTYVDDIVEGIVC 243 Query: 236 VL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 ++ K G G + YNIG N+ +D V + + ++P Y +H Sbjct: 244 IMQHAPEKKNGEDGLPIPPYKVYNIGNNSPENLLDFVTILQEELIAAKVLPDDYDFETHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P ++ GL WY Sbjct: 304 ELVPM---QPGDVSVTYADTTSLEQDFGFKPSISLRKGLRAFAQWY 346 >gi|134299746|ref|YP_001113242.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] gi|134052446|gb|ABO50417.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] Length = 331 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 101/333 (30%), Positives = 160/333 (48%), Gaps = 36/333 (10%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TG +G IGS L R LV++ + +V D+L Y GNL + I N DI D Sbjct: 9 VLITGCSGIIGSWLTRRLVDEGANVVGIVRDRLGY-GNLLQEQTI---NRMVVAHGDITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E++ D + + AA++ V +RS L E +N+ GT+I+LE RL + Sbjct: 65 FLFMSRVMAEYEIDTVFHLAAQTIVTIANRSPLSTFE---SNLRGTWIVLEACRLSPTV- 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + S+D+ YG + + ED P PY +K+ +D L ++ HTY +P Sbjct: 121 -------ERVVVASSDKAYGDSKELPYREDQPLRGKHPYDVSKSCTDLLAQSYYHTYRLP 173 Query: 179 VLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ +N YG ++IP I ++EG L DG +R++LYVED V A YL L Sbjct: 174 VAITRLANVYGGGDLNFNRIIPGTIKAVLEGRPPVLRSDGSPLREYLYVEDAVDA-YLTL 232 Query: 238 KKGR-----IGERYNIGGNNERKNIDIVFEIGFLL-DALIPKSYSHTELIRFIEDRPGHD 291 K +GE +N + ++IV EI + +P+ H G Sbjct: 233 AKNLHRSNVMGEAFNFAPQQPYQVLEIVQEIIRIAGKEFVPEIRKHMN---------GEI 283 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 DSSK K + W + ++ GL+ T+ WY Sbjct: 284 LHQYSDSSKAKERLNWHTRWDLTKGLSVTIEWY 316 >gi|237755680|ref|ZP_04584290.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692162|gb|EEP61160.1| NAD-dependent epimerase/dehydratase [Sulfurihydrogenibium yellowstonense SS-5] Length = 332 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 23/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND--LKIQVLVIDKLTYAGNLNSL--KEISQSNLFSFLQV 57 R++VTG GFIGS L L+ + + + + L G L+S K + + +F+ Sbjct: 7 RVLVTGSGGFIGSHLVERLLEEGCEVVAFVKYNSLNKWGWLDSFDKKVLDKIEIFTG--- 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + +R A+K D + + AA + S + + ++ TNI GT +L+ +C Sbjct: 64 DIRNSDSVRKAVKSV--DVVFHLAALISIPYSYISPESYVETNINGTLNILQ------AC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + L ST EVYG+ +ED P SPYSATK ++DYL ++ ++ + Sbjct: 116 MDYSIE---KVLITSTSEVYGTAKFVPITEDHPKQGQSPYSATKIAADYLAESFYRSFDL 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV++ N YGP +IP IT+++ G G RD +YV+D V + Sbjct: 173 PVVIVRPFNTYGPRQSARAVIPTIITQLLSGYEEIKLGSLHPTRDLVYVKDTVEGFVRLA 232 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IG+ NI +E D+ + L++ + P + +E +R I + R Sbjct: 233 ECDSAIGKEVNIATQSEISIQDLAKK---LINKINPNAKIVSEDVR-IRPQNSEVERLLG 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K+K GW P+ +++ GL T+ W+ Sbjct: 289 SNEKLKELTGWIPETDIDRGLELTIEWF 316 >gi|303229612|ref|ZP_07316400.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515737|gb|EFL57691.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 364 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 31/350 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKE---------ISQSNLF 52 +++TG AGF+G+ L L N+++ +++ +D + ++ SLKE + N + Sbjct: 13 ILITGAAGFVGANLVMSLFNNIENSLIIGVDSVNDYYDV-SLKEYRLQQIVSSVKHDNQW 71 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+E ++S ++PD +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 72 IFKKGNIADKEFLQSIFDGYKPDVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILECCR 131 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + K + S+ VYGS K +S +D NP S Y+ATK S++ L ++ Sbjct: 132 HSY---DNGAKGVEHLVYASSSSVYGSNKKIPYSTDDQVDNPVSLYAATKKSNELLAYSY 188 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 Y IP YGP P+ + T ++ +G + ++ G RD+ Y++D V Sbjct: 189 AKLYNIPCTGLRFFTVYGPAGRPD-MAYFGFTNILRKGEVIKIFNYGNCKRDFTYIDDIV 247 Query: 231 RALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYS 276 +Y V+ + G G YNIG N+ +D V +G + ++P ++ Sbjct: 248 EGVYKVMQVAPERRNGADGLPVPPYAIYNIGNNSPENLLDFVTILGEELIGAGVLPTDFN 307 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D+S ++++ G+ P + GL + WY D Sbjct: 308 MERHKELVPMQPGDVPITYADTSALETDFGFKPSTTLREGLRRFAIWYKD 357 >gi|282848734|ref|ZP_06258129.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294792367|ref|ZP_06757514.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|282581520|gb|EFB86908.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294456266|gb|EFG24629.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 306 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 164/327 (50%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGGAGFIGS L L+ D V VID L Y GN KE S F+++DI Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGH-TVQVIDNL-YTGN----KEFVHSKA-QFVELDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S L+EF+PD I + AA++ V S+ N++G LL + Sbjct: 54 DPK-LYSVLEEFRPDYIFHEAAQTEVSTSMSDPMLDCDINLMGLINLLN---------AA 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D +FL S+ VYG+LD +E+M NPSS Y TK ++++ + + +G+P + Sbjct: 104 VKLDVKKFLMPSSAAVYGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYI 163 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN +GP +I + +++GS + +YGDG+ RD++YV+D V A L + Sbjct: 164 CYRYSNVFGPRQGNGGEGGVISIFAKAIVQGSPIIIYGDGKQTRDFIYVDDVVEANILGM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G YN+ + I + L+D S E++ + + R G R + Sbjct: 224 QHQVTG-IYNV-------STGISSSVNLLVDEFRNISGKDIEVV-YDKPRLGDIRDSVLA 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + E+ + + N+ GL KT ++ Sbjct: 275 TDKSEKELLFTAKYNLHDGLIKTYEYF 301 >gi|226312108|ref|YP_002772002.1| nucleotide sugar epimerase [Brevibacillus brevis NBRC 100599] gi|226095056|dbj|BAH43498.1| putative nucleotide sugar epimerase [Brevibacillus brevis NBRC 100599] Length = 316 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 33/325 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV---IDKLTYAGNLNSLKEISQSNLFSF---- 54 + +VTG AGFIGS L + L+ND + + ID A L +L EI + F+F Sbjct: 3 KALVTGCAGFIGSHLTQRLLNDGVTVIGIDGFIDNYDVAAKLRNLAEIGKHPAFTFHSTT 62 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETR 112 LQ D S L+ DA+ + AA V R+ G ++++ NI+ T LLE Sbjct: 63 LQTGRWD-----SWLENV--DAVFHLAALPGV-RNSWGKSFADYVSHNILATQELLE--- 111 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +CL + K + S+ VYG++ + +E+ P P SPY TK + + + + Sbjct: 112 ---ACLQRPKPPVI--VVSSSSSVYGTMQGIVTNENAPLRPVSPYGVTKEAMEQICSVYV 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+PV + YGP P+ +M++G V +YGDGQ RD+ YV D V A Sbjct: 167 KAYGLPVTMLRYFTVYGPRQRPDMAFHRFFRQMMKGEQVIVYGDGQQSRDFTYVTDAVEA 226 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + G+ +N+GG+ E K ID++ +G L++ L P+ I + G Sbjct: 227 NLLAAQHAVPGDIFNVGGDREIKLIDVLSIMGTLMN-LTPR-------ITYQNGPAGDSL 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGL 317 R D + +G+ P+ +E GL Sbjct: 279 RTCADIQFAQQRLGYKPKVTLEEGL 303 >gi|24214280|ref|NP_711761.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|24195197|gb|AAN48779.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] Length = 329 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 45/356 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS L L+ + + +V V+D + A NLN +KE + NL Sbjct: 1 MKALVTGGAGFIGSHLVDLLLEN-QFEVTVLDNFSTGRAFNLNHVKE--KINLVE----- 52 Query: 59 ICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 CD +K+FQ D + + AA + + SI + + +N+ GT +L+ +R + Sbjct: 53 -CDLSIQEDWIKKFQSVDYVFHLAALADIVPSIQNPEGYFQSNVTGTLNVLQASRHYGVK 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ ++ YG + E P P PY+ TK + LV+ W Y Sbjct: 112 ---------RFVYAASSSCYGIPELYPTPETSPILPQYPYALTKRMGEELVMHWAQVYKF 162 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 P L N YGP + + + + + G + GDG+ RD+ YV D V A+ Sbjct: 163 PALSLRFFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPFTVVGDGKQTRDFTYVRDVVEAV 222 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + + ++GE YN+ G+ +++ + E LL + +I RPG Sbjct: 223 FAAAQSDKVGEIYNV-GSGATISVNRIVE---LLKG----------EVTYIPKRPGEPDS 268 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 D +KIK ++ W P+ ++E+G+ + L N +WR P++ K + S W Sbjct: 269 TFADIAKIKKDLKWSPKISIETGIGE----LLKNIDYWREAPVWTPDKIEKATSDW 320 >gi|289451006|gb|ADC93922.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Autumnalis] Length = 329 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 165/358 (46%), Gaps = 49/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS L L+ + + +V V+D + A NLN +KE ++D Sbjct: 1 MKALVTGGAGFIGSHLVDLLLEN-QFEVTVLDNFSTGRAFNLNHVKE----------KID 49 Query: 59 I--CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + CD +K+FQ D + + AA + + SI + + +N+ GT +L+ +R + Sbjct: 50 LVECDLSIQEDWIKKFQSVDYVFHLAALADIVPSIQNPEGYFQSNVTGTLNVLQASRHYG 109 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ++ YG + E P P PY+ TK + LV+ W Y Sbjct: 110 VK---------RFVYAASSSCYGIPELYPTPETSPILPQYPYALTKRMGEELVMHWAQVY 160 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 P L N YGP + + + + + G + GDG+ RD+ YV D V Sbjct: 161 KFPALSLRFFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPFTVVGDGKQTRDFTYVRDVVE 220 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++ + ++GE YN+ G+ +++ + E LL + +I RPG Sbjct: 221 AVFAAAQSDKVGEIYNV-GSGATISVNRIVE---LLKG----------EVTYIPKRPGEP 266 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 D +KIK ++ W P+ ++E+G+ + L N +WR P++ K + S W Sbjct: 267 DSTFADITKIKKDLKWSPKISIETGIGE----LLKNIDYWREAPVWTPDKIEKATSDW 320 >gi|257084754|ref|ZP_05579115.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Fly1] gi|256992784|gb|EEU80086.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Fly1] Length = 319 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L Y D QV+VID L+ NLN+ + I+ F++ + Sbjct: 4 FLITGGAGFIGSTLANYYSKD--NQVVVIDDLSMGQTENLNASENIT------FIEGSVI 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E+Q D I + AA + V S+ E N LLE R + Sbjct: 56 DQQLMEKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKY------ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +KD R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 110 -QKDLKRLVFASSAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVR 231 N YGP P ++ + R++ V ++GDG+ RD+++VED V+ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISIVMDSYKRLLANEEVTFNIFGDGKQSRDFVFVEDVVQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL LV + +GE YN+G +++ + ++ +P Y E R G Sbjct: 229 ALDLVSHSDQSLGEVYNVGTGKATDLNELISSLNDIMKVTLPVEYK--------EARAGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + D SK+++ I + P+ +++SGL+K V + L Sbjct: 281 IKDSLADISKLRA-ISYEPKYSIQSGLDKYVKYEL 314 >gi|117925406|ref|YP_866023.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] gi|117609162|gb|ABK44617.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] Length = 335 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 102/349 (29%), Positives = 165/349 (47%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR+++TG AGFIGSAL R L+ D +V+ ID L Y L L + ++ L+ Sbjct: 1 MRVLITGAAGFIGSALSRKLL-DRGDEVIGIDNLNDYYDVTLKQARLARHVEHPAYTDLR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ D + + +P +VN AA++ V S++ +I N++G +LE Sbjct: 60 VDLEDSQAVAQVFATHKPQRVVNLAAQAGVRYSLVNPHAYINANVVGFLNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTY 175 C + D + + ST VYG+ FSE +P S Y+ATK S++ + A+ H + Sbjct: 114 CRNHDVE---HLVYASTSSVYGANTNMPFSEHSGTQHPVSLYAATKKSNEMMAHAYSHIF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV YGP+ P+ + + +M+ G + ++ G+++RD+ Y++D V + Sbjct: 171 RLPVTGLRFFTVYGPWGRPDMALFMFTRKMLAGEPIDVFNHGRHMRDFTYIDDIVNGVER 230 Query: 236 VLKK------GRIGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL K G+ YNI GNNE + E+ L++ + + Sbjct: 231 VLDKIAQPNEAWTGQNPDPATSLSPYRIYNI-GNNEPVELMRYIEV---LESTLGIAAKK 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 L D P YA D S + +IG+ PQ +E G+ K V WY D Sbjct: 287 NFLPLQKGDVPD---TYA-DVSNLVEDIGYRPQTTVEEGIGKFVAWYRD 331 >gi|289451090|gb|ADC94005.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Grippotyphosa] Length = 329 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 165/358 (46%), Gaps = 49/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS L L+ + + +V V+D + A NLN +KE ++D Sbjct: 1 MKALVTGGAGFIGSHLVDLLLEN-QFEVTVLDNFSTGRAFNLNHVKE----------KID 49 Query: 59 I--CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + CD +K+FQ D + + AA + + SI + + +N+ GT +L+ +R + Sbjct: 50 LVECDLSIQEDWIKKFQSVDYVFHLAALADIVPSIQNPEGYFQSNVTGTLNVLQASRHYG 109 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ++ YG + E P P PY+ TK + LV+ W Y Sbjct: 110 VK---------RFVYAASSSCYGIPELYPTPETSPILPQYPYALTKRMGEELVMHWAQVY 160 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 P L N YGP + + + + + G + GDG+ RD+ YV D V Sbjct: 161 KFPALSLRFFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPFTVVGDGKQTRDFTYVRDVVE 220 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++ + ++GE YN+ G+ +++ + E LL + +I RPG Sbjct: 221 AVFAAAQSDKVGEIYNV-GSGATISVNRIVE---LLKG----------EVTYIPKRPGEP 266 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 D +KIK ++ W P+ ++E+G+ + L N +WR P++ K + S W Sbjct: 267 DSTFADIAKIKKDLKWSPKISIETGIGE----LLKNIDYWREAPVWTPDKIEKATSDW 320 >gi|169350030|ref|ZP_02866968.1| hypothetical protein CLOSPI_00770 [Clostridium spiroforme DSM 1552] gi|169293243|gb|EDS75376.1| hypothetical protein CLOSPI_00770 [Clostridium spiroforme DSM 1552] Length = 358 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 100/351 (28%), Positives = 167/351 (47%), Gaps = 34/351 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQ-----SNL 51 ++++TG AGFIGS L L+ D + I ++ ID ++ +++ LK+I +N Sbjct: 6 KILITGSAGFIGSNLILRLLKDYEDIHIIGIDNMSDYYDVSIKEYRLKKIEDLVEKTNNK 65 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 +SF +I D+ I E +PD +VN AA++ V SI D +I +N+IG + +LE Sbjct: 66 WSFYIGNIADKNLIDKIFDEHKPDIVVNLAAQAGVRYSISNPDAYIESNLIGFYNILEAC 125 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + +K + S+ VYGS K +S +D NP S Y+ATK S++ + A Sbjct: 126 RHSY---DNGQKGVDHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHA 182 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++ + ++ G RD+ Y++D V Sbjct: 183 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLRNNETIKIFNYGNCKRDFTYIDDIV 242 Query: 231 RALYLVLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY- 275 + V+KK + GE YNIG N+ ++ V + + ++PK Y Sbjct: 243 EGIVRVMKKAPEKKKGEDGLPIPPYKVYNIGNNHPENLLEFVDILQQELISAGVLPKDYD 302 Query: 276 --SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +H ELI +PG D++ ++ + G+ P ++ GL K WY Sbjct: 303 FEAHKELIAM---QPGDVPITYADTTPLEQDFGFKPSTSLRDGLRKFARWY 350 >gi|261415366|ref|YP_003249049.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371822|gb|ACX74567.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327005|gb|ADL26206.1| nucleotide sugar epimerase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 364 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 38/358 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLN----SLKEISQ-----SNLF 52 ++VTG AGFIG LC+ L+ND LV +D +T ++N LKEI + Sbjct: 13 VLVTGAAGFIGCNLCKKLLNDYNCSELVGLDSITDYYDVNIKHERLKEIETLATLTGKKW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 +F++ ++ D+ I S +++ +VN AA++ V SI D +I +N+IG + +LE R Sbjct: 73 TFVKANLADKAAIDSLFEKYHFAVVVNLAAQAGVRYSITNPDAYIQSNLIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 +K + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Sbjct: 133 -----RGAEKGEVEHLVYASSSSVYGSNKKIPYSTDDKVDNPVSLYAATKKSNELMAHAY 187 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ ++ G + ++ G+ RD+ +V+D V Sbjct: 188 SKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLKAGKTIQIFNYGKCKRDFTFVDDIVE 247 Query: 232 ALYLVLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY-- 275 + V++ + GE YNIG N+ +D V + + ++P Y Sbjct: 248 GVVRVMQHAPEKQNGEDGLPLPPYKVYNIGNNHPENLLDFVTILQEELVRAKVLPADYDF 307 Query: 276 -SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +H EL+ +PG D++ ++ + G+ P + GL K WY + W+ + Sbjct: 308 EAHKELVPM---QPGDVPVTYADTTALEQDFGFKPATPLREGLRKFAEWYAE--WYGK 360 >gi|239828545|ref|YP_002951169.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. WCH70] gi|239808838|gb|ACS25903.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. WCH70] Length = 337 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 166/349 (47%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS L + L+N+ +V+ ID + Y L + L+ I F F + Sbjct: 1 MNILVTGAAGFIGSHLSKRLLNE-GYEVIGIDNINDYYDPKLKWDRLEWIKHPK-FKFEK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V + DRE I + +++P +VN AA++ V S++ +I +NI+G +LE R + Sbjct: 59 VSLEDRERINNIFIQYKPAIVVNLAAQAGVRYSLVNPHAYIDSNIVGFMNILEACRHY-- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ K FS D +P S Y+ATK +++ + + H Y Sbjct: 117 -------NVGHLIYASSSSVYGANTKMPFSVHDNVDHPVSLYAATKKANELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 G+P YGP+ P+ + L +I G + ++ +G +RD+ Y++D V ++Y Sbjct: 170 GLPTTGLRFFTVYGPWGRPDMALFLFTKAIINGEPIKVFNNGNMMRDFTYIDDIVESIYR 229 Query: 235 LVLKKGRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L+ KK + YNIG +N +D + I L K Sbjct: 230 LIQKKPKPNPNWDGKNPDPGTSYAPYRVYNIGNSNPVNLMDFITAIEEKLGIEAKK---- 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+ + G D + +EI + PQ +++ G++K + WYLD Sbjct: 286 ----EFLPLQAGDVPATYADVDDLYNEINFRPQTSIKEGVSKFIDWYLD 330 >gi|55378346|ref|YP_136196.1| dTDP-glucose-46-dehydratase [Haloarcula marismortui ATCC 43049] gi|55231071|gb|AAV46490.1| DTDP-glucose-46-dehydratase [Haloarcula marismortui ATCC 43049] Length = 353 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 100/349 (28%), Positives = 156/349 (44%), Gaps = 34/349 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTG GF+GS L LV + V V + T +G L +++ + + + D+ D+ Sbjct: 12 VFVTGADGFVGSHLTEQLV-EFGADVHVFVRATSSGELQNIRHLRDE--ITIHRGDLRDK 68 Query: 63 ECIRSALK---EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + A+K E+ + + AA++HV S E I TN++GT LL+ + + Sbjct: 69 HSVEQAMKHLTEYSDTIVFHLAAQAHVGESWDRPYETIDTNVVGTLNLLQ------TVVD 122 Query: 120 QDKKDQFRFLQISTDEVYGSLD-------------KGLFSEDMPYNPSSPYSATKASSDY 166 D D +F T E YG++D + L SE P NP+S Y+ +K ++D+ Sbjct: 123 LDL-DIAKFDTAGTSEEYGNVDGQMEDKHEYDSDGRVLLSERSPVNPTSVYATSKLAADF 181 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 L + + YG+P + + NNYGP P + +T+ +E V L G+ RD YV Sbjct: 182 LTMNYHDAYGLPGVTTRMFNNYGPRQNPRYITGTIVTQALERGIVEL-GNLTPRRDMCYV 240 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D VR V +G GE Y G +NI + LL+ + Y I +D Sbjct: 241 SDGVRGHMHVALEGSPGEEYVYGYG---ENISMRDWTELLLEVGSEEGYWEDPEIVQRDD 297 Query: 287 --RPGHD--RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 RPG + K+ E GW P+ + G T+ WY N W Sbjct: 298 RYRPGDSDVEELLVGYEKLHEETGWEPEVSWREGARHTIEWYAANKEKW 346 >gi|237727430|ref|ZP_04557911.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434286|gb|EEO44363.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 352 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 50/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG-NLNS----- 42 M+++VTG AGFIGS LC +L +ND L +L+ G + N+ Sbjct: 10 MKILVTGAAGFIGSKLCYFLAQRGDNVIGIDNINDYYDIRLKYGRLSEGGIHCNNDYDMP 69 Query: 43 LKEISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 KE S LF FL++DI D+ + K + D ++N AA++ V SI ++ + Sbjct: 70 WKEFQTSTLFPNYKFLRMDITDKTALDVLFKTEKFDKVINLAAQAGVRYSITNPYAYLES 129 Query: 100 NIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYS 158 NIIG +LE SC + + K + + S+ VYG +K FSE D+ P S Y+ Sbjct: 130 NIIGFLNILE------SCRNFEIK---QLIYASSSSVYGMNEKTPFSENDIVTTPVSLYA 180 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDG 217 A+K S++ + ++ YG+P YGP+ P+ + P+ + I G + ++ +G Sbjct: 181 ASKKSNELMAHSYSKLYGLPTTGLRYFTVYGPWGRPD-MAPMIFAKAISHGEPIKVFNNG 239 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFLLD 268 RD+ Y++D V V+ I E+ YNIG + K +D + EI Sbjct: 240 NLSRDFTYIDDIVNGTIRVIDNCPIAEKCPNNIPYKIYNIGAGHPVKLMDFISEIE---T 296 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 AL K+ H ++ + G + D+SK++ E+G+ P ++ G+ + W+ Sbjct: 297 ALGKKAEKH-----YLPMQQGDVYQTYADTSKLEKEVGYKPSISLHEGITNFIKWF 347 >gi|227550515|ref|ZP_03980564.1| possible UDP-glucose 4-epimerase [Enterococcus faecium TX1330] gi|257888542|ref|ZP_05668195.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,141,733] gi|257897083|ref|ZP_05676736.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium Com12] gi|227180416|gb|EEI61388.1| possible UDP-glucose 4-epimerase [Enterococcus faecium TX1330] gi|257824596|gb|EEV51528.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,141,733] gi|257833648|gb|EEV60069.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium Com12] Length = 318 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 38/330 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 7 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMDKQV------TFIEGDVS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE+Q I + AA + V S+ E N +LLE R + S L Sbjct: 59 DSQLMERIMKEYQFAYIFHLAAVASVADSVERPVETHRVNFDSALLLLEFARKYQSNLK- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 118 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKAEFTLFGDGSQSRDFVYIEDVIQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 232 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 R D SKI+S +G+ P+ ++ SG+ + Sbjct: 283 DIRDSLADISKIRS-LGYQPKFDILSGMER 311 >gi|293377306|ref|ZP_06623510.1| NAD-binding protein [Enterococcus faecium PC4.1] gi|292643998|gb|EFF62104.1| NAD-binding protein [Enterococcus faecium PC4.1] Length = 315 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 38/330 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 4 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMDKQV------TFIEGDVS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE+Q I + AA + V S+ E N +LLE R + S L Sbjct: 56 DSQLMERIMKEYQFAYIFHLAAVASVADSVERPVETHRVNFDSALLLLEFARKYQSNLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 115 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKAEFTLFGDGSQSRDFVYIEDVIQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 229 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 R D SKI+S +G+ P+ ++ SG+ + Sbjct: 280 DIRDSLADISKIRS-LGYQPKFDILSGMER 308 >gi|56421663|ref|YP_148981.1| dTDP-glucose 4,6-dehydratase [Geobacillus kaustophilus HTA426] gi|56381505|dbj|BAD77413.1| dTDP-glucose 4,6-dehydratase [Geobacillus kaustophilus HTA426] Length = 331 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 29/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQV- 57 M++++TG GFIGS L LV Q + Y + NS + S ++ L+V Sbjct: 1 MKILITGADGFIGSHLTEELVR----QGYDVKAFVYYNSFNSWGWLDTSPESIKKELEVF 56 Query: 58 --DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D ++ A+K D +++ A+ + S D ++ TNI GT +L+ R Sbjct: 57 AGDIRDPHGVKEAMKGC--DVVLHLASLIAIPYSYHSPDTYVDTNIKGTLNVLQAAR--- 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D + + ST EVYG+ E+ P SPYSA+K +D + +A+ ++ Sbjct: 112 ------ELDIQKVVHTSTSEVYGTAQYVPIDENHPLQGQSPYSASKIGADQMAIAFYRSF 165 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 PV + N YGP +IP IT++ G G RD+ Y++D V Sbjct: 166 ETPVAIIRPFNTYGPRQSARAVIPTIITQIASGKRKIKLGSLHPTRDFNYIKDTVNGFIS 225 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+ G IGE NIG N E + I + + + T+ +R + +R + Sbjct: 226 VMTHGESIGEVINIGSNFE---VSIGETAKLIAEIMGVDIEIETDDVRIRPKKSEVERLW 282 Query: 295 AIDSSKIKSEIGWFP----QENMESGLNKTVCWYLD 326 A D+SK K+ +GW P +E + GL +T+ W+ D Sbjct: 283 A-DNSKAKALLGWEPKYGGKEGFKRGLKETIEWFTD 317 >gi|118591832|ref|ZP_01549227.1| dTDP-glucose 4,6-dehydratase [Stappia aggregata IAM 12614] gi|118435475|gb|EAV42121.1| dTDP-glucose 4,6-dehydratase [Stappia aggregata IAM 12614] Length = 348 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 28/325 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTGG GFIGS + + + + + +++D+++YA + L + + ++ DI Sbjct: 32 KIVVTGGLGFIGSKVFKRVARMANVAETVILDRVSYAADFRRLAPVGDAGDLPVIRGDI- 90 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R I A DA+++ AAE+HV RS + F N+ GT +LL + L Sbjct: 91 -RSPIDVAAALHDCDAVIHLAAETHVPRSFTAPELFFDVNVTGTEVLLN------AALDA 143 Query: 121 DKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F+ ISTDEVYG +LD+ E P P++PY+ +KA ++ V+ + G+ Sbjct: 144 GVK---HFIHISTDEVYGPALDE--VRETAPLRPTTPYATSKAMAEEAVMMAAQS-GLRS 197 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL-- 237 + +N G PEKL P + + ++G + + G G R +L D A+ L+L Sbjct: 198 TILRPTNAVGTGQNPEKLFPRFVMQALKGQRLTIEGTGAQERSFLPAGDLAAAIGLLLNT 257 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + E +NI G + V E+ + + S + FI DR +D Y ID Sbjct: 258 QDEQPLEIFNISGEEDLS----VLEVARRVSDVTGVSTG----LHFIPDRETNDLAYRID 309 Query: 298 SSKIKSEIGWFPQENMESGLNKTVC 322 S+++S +G+ + +++ L + +C Sbjct: 310 DSRLRS-LGYRQKSSVDQEL-RAIC 332 >gi|182419742|ref|ZP_02950982.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum 5521] gi|237666599|ref|ZP_04526584.1| YfnG [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376290|gb|EDT73872.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum 5521] gi|237657798|gb|EEP55353.1| YfnG [Clostridium butyricum E4 str. BoNT E BL5262] Length = 331 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 97/328 (29%), Positives = 166/328 (50%), Gaps = 26/328 (7%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTGG GF+GS L + LVN + VLV D + + N+ +E N+ S + D Sbjct: 11 VFVTGGTGFLGSYLVKKLVNSGANVTVLVRDSIPKS-NMYIGEEYKSINVVSG---KLED 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + L E++ D I + AA++ V +++ LG ++NI GT+ +LE R S L Sbjct: 67 YDIFERILGEYEIDTIFHLAAQAIVGVANKNPLGT---FSSNIQGTWNVLEAAR--RSPL 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + S+D+ YG +K + E+MP PY +K+ +D + + TY +P Sbjct: 122 VK------QIIVASSDKAYGDQEKLPYDENMPLQGKHPYDVSKSCTDLIAQTYYETYKLP 175 Query: 179 VLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ C N YG ++IP I ++ G + DG +RD+ YVED V A + Sbjct: 176 VCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPVIRSDGSFIRDYFYVEDAVDAYIALA 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +K + YNIGG + +I + L+D ++ + ++L I ++ ++ ++ Sbjct: 236 EK---VQEYNIGGQAFNFSNEIQLTVLELVDKIL--NIMGSDLKSVILNQGSNEIKHQYL 290 Query: 298 SSKIKSEI-GWFPQENMESGLNKTVCWY 324 S+K +I GW P+ ++ GL KTV WY Sbjct: 291 SAKKARDILGWSPKYTIDEGLRKTVEWY 318 >gi|1332603|emb|CAA66415.1| dNDP-glucose dehydratase [Streptomyces glaucescens] Length = 164 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 11/158 (6%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 V V+D L+YAGNL +L + F+ DICD + + + D +V+ AAESHVD Sbjct: 18 VTVLDALSYAGNLANLDPVRDHPRLRFVHGDICDADLVDRVMA--GQDQVVHLAAESHVD 75 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 RS+L A F+ TN GT LL+ + F+Q+STDEVYGSL+ G ++E Sbjct: 76 RSLLDAAAFVRTNAGGTQTLLDAAL---------RHGVAPFVQVSTDEVYGSLETGSWTE 126 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 D P P+SPY+ +KAS D L LA ++G+ V ++ CS Sbjct: 127 DEPLRPNSPYATSKASGDLLALAMHVSHGLDVRITRCS 164 >gi|229147807|ref|ZP_04276149.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24] gi|228635635|gb|EEK92123.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24] Length = 339 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIG L + L+ D ++V+ ID L G L+ L + F Sbjct: 1 MKVLVTGVAGFIGFHLTQKLL-DRGVEVIGIDNLNDYYDVSLKEGRLSQLSQHKHKKNFE 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+++D+ D I S + + ++N AA++ V SI +I +N++G +LE R Sbjct: 60 FIKMDLVDNHQIESLFNKNDFEVVINLAAQAGVRYSIENPRAYIDSNVVGFLNILEGCR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWG 172 +KK + + S+ VYG+ K FSE D +P S Y+ATK S++ L A+ Sbjct: 119 -------NKKIK-HLIYASSSSVYGANKKMPFSEIDSVDHPVSLYAATKKSNELLAHAYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y IP YGP+ P+ + EG + ++ +G RD+ Y++D V Sbjct: 171 HLYKIPTTGLRFFTVYGPWGRPDMAYFKFAKNITEGKPINVFNNGDMYRDFTYIDDIVEG 230 Query: 233 LYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + ++ I E YNIG NN K ++ + ++ K+ Sbjct: 231 IVRLMD--VIPEPMQDSNVIDPSNSYAPYRVYNIGNNNPEKLMEFI--------NILEKA 280 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I F+ + G + D +K+ +G+ P ++E GL K V WY D Sbjct: 281 IGKKAEIEFLPMQKGDVKATYADINKLNGAVGFTPSTSLEVGLGKFVDWYKD 332 >gi|227530682|ref|ZP_03960731.1| possible UDP-glucose 4-epimerase [Lactobacillus vaginalis ATCC 49540] gi|227349411|gb|EEJ39702.1| possible UDP-glucose 4-epimerase [Lactobacillus vaginalis ATCC 49540] Length = 310 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 32/323 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS L LV L V ++D L+ G ++ +I +F Q D+CD Sbjct: 3 KVLITGGAGFIGSFLAHKLVK-LGRDVTIVDNLS-MGRKENIDDID----VTFYQHDVCD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSCL 118 + + L + + D I AA S V S+ L E +++ T + + L Sbjct: 57 HQFMHELLTKREFDYIYYLAAVSSVADSVERPLETHEVNQESVVDTLEYIRKQNLPIK-- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RFL S+ VYG+L ED P +PY+ K +S+ + +G+ YG+P Sbjct: 115 --------RFLFTSSAAVYGNLPDFPKQEDSHVQPLTPYAIDKYASERFTIDYGNLYGLP 166 Query: 179 VLLSNCSNNYGPYHFPEKL---IPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALY 234 N YGP P+ + IT+ ++ + F LYGDG RD++YV+D V AL Sbjct: 167 TTAVRFFNVYGPRQNPDSPYSGVLSIITKCLKENKPFTLYGDGSQTRDFVYVDDVVNALM 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + K+ + YN+ E ID++ + I I+F E R G + Sbjct: 227 TISKQSNEPKVYNVANGGETPLIDVIHTYEKISGKQIK--------IKFAESRNGDINKS 278 Query: 295 AIDSSKIKSEIGWFPQENMESGL 317 D S++K EIG+ P ++E GL Sbjct: 279 KADISRLK-EIGFEPHWSLEDGL 300 >gi|28192477|gb|AAM77990.1| NDP-hexose-4,6-dehydratase [Streptomyces carzinostaticus subsp. neocarzinostaticus] Length = 331 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 23/328 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDIC 60 + VTG GFIGS L LV ++ ++A G L+ L + + S ++V Sbjct: 5 VAVTGAEGFIGSHLVETLVRRGHRVRAMVQYNSFASWGWLDRL----DAEVMSHVEVFPG 60 Query: 61 DRECIRSALKEFQPDAIV-NFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D S L+ +P ++V + AA + S ++ TN++GT +LE R + Sbjct: 61 DVRDPASVLELVEPASVVYHLAALIAIPYSYQAPRSYLDTNVMGTMNVLEAVRATGTP-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST E YGS ED P SPY+ATK ++D LV ++ +YG+P Sbjct: 119 -------RLVHTSTSETYGSARTVPIGEDHPLQAQSPYAATKVAADKLVESYHLSYGVPA 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV--- 236 + N +GP +IP I++++ G+ G RD+ YV D A V Sbjct: 172 VTLRPFNTFGPRQSARAVIPTIISQLVAGARQITLGSLAPTRDFTYVTDTAEAFVSVGTA 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 IGE +N G E + +I L+DA S E + + + R Sbjct: 232 PASAVIGEVFNAGTGTEVSIGRLAADIMRLMDA----DASIREDPQRLRPKDSEVLRLVC 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+ +++ GW P+ + E GL +T+ W+ Sbjct: 288 DAGSLRARTGWRPRTDREDGLRRTIEWF 315 >gi|76802963|ref|YP_331058.1| nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase ) [Natronomonas pharaonis DSM 2160] gi|76558828|emb|CAI50422.1| nucleoside-diphosphate-sugar epimerase 1 (probable UDP-glucose 4-epimerase) [Natronomonas pharaonis DSM 2160] Length = 328 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 30/346 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTGGAGFIG L D V+V+D N+ + ++ +++N + Sbjct: 1 MQVLVTGGAGFIGGHLAEQFAADGH-DVVVLDNFEPYYDLGIKEHNVEAARDAAKANGAT 59 Query: 54 FLQVD--ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + +D I D + + + + E D I + AA++ V +S+ + N+ GT LLE Sbjct: 60 YKLIDGSITDDDQVDTLVSE--ADVIYHQAAQAGVRKSVEQPAKVNAYNVDGTVTLLEAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + D R + S+ VYG + + E P P SPY +K +++ + Sbjct: 118 R---------RHDVERVVLASSSSVYGKPEYLPYDEAHPTTPVSPYGVSKLAAEQYARVY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+P + YGP P + ++R + G +YGDG RD+ YV D R Sbjct: 169 SEVYGLPTVGLRYFTVYGPRMRPNMAMTNFVSRCLHGESPVIYGDGTQTRDFTYVADIKR 228 Query: 232 ALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 +L GE NIG + IDI + D + P + I + + R G Sbjct: 229 VNAQLLNDDSADGEILNIGSTD---TIDIQTLAEVVRDEIDP-----SLDIEYTDPREGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 D SK + +G+ P ++ G++ + WY +N W+ PL + Sbjct: 281 AEHTHADISKANALLGYEPTVDIREGVSAFIDWYRENKAWYDPLVR 326 >gi|89057735|ref|YP_512189.1| UDP-galactose 4-epimerase [Jannaschia sp. CCS1] gi|88866289|gb|ABD57165.1| UDP-galactose 4-epimerase [Jannaschia sp. CCS1] Length = 327 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M++++TGGAG++GSA R++ + + D L + G + S + D Sbjct: 1 MKILITGGAGYVGSACLRHMAAHGH-EAMAYDNLAMGHGGAVGS---------HPLVVAD 50 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + + + L++F DA+++FAA ++V S+ D NI GT LL R Sbjct: 51 IADTDKLTATLRDFGADAVMHFAAATYVGESVENPDYHYGNNIAGTRSLLNAMR------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R L ST YG D SE P +P SPY+ TK + ++++ + H YG+ Sbjct: 105 ---AAGVQRMLFSSTCATYGMTDSPTMSETTPQDPFSPYARTKLAVEWMIRDFAHAYGLG 161 Query: 179 VLL--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRD 222 L ++ +G H PE LIPL + T + + + ++G DG +RD Sbjct: 162 FTLLRYFNAAGADPDGQFGEDHQPENHLIPLVLQTALGQRDKIMIFGEDYPTPDGTCIRD 221 Query: 223 WLYVEDHVRALYLVLKKG--RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +++ D A L ++ E +NIG + +I+ + IP+ + Sbjct: 222 YVHTSDLASAHRLAIEATTPSTAEVFNIGTGIGQSVKEIIAACEDITGQAIPQELT---- 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 +R RPG R D +K+K+++GW PQ Sbjct: 278 VR----RPGDPPRLVADPTKLKTQLGWEPQ 303 >gi|301308244|ref|ZP_07214198.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 20_3] gi|300833714|gb|EFK64330.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 20_3] Length = 355 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQSNL-FSFLQ 56 ++VTG AGFIGS L + L D+K I+V+ ID +T ++N LKEI N + F+ Sbjct: 13 VLVTGAAGFIGSNLVKRLFKDIKNIKVIGIDSITDYYDVNIKYERLKEIEALNRDWEFVH 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D+ + + + +VN AA++ V SI D +I +N+IG + LLE R Sbjct: 73 ASISDKVAVEKIFTDNKIAVVVNLAAQAGVRYSITNPDAYIESNLIGFYNLLEACR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 129 -----HHEVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++ +G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTNKLRDGKTIQIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 +++ + GE YNIG N+ +D V + + ++P++Y +H Sbjct: 244 IMQHAPEKQNGEDGLPIPAYKVYNIGNNSPENLLDFVSILQEELIRAKVLPQNYDFEAHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ RPG D++ ++ + G+ P ++ GL WY Sbjct: 304 ELVPM---RPGDVSVTYADTTPLEQDFGFKPSTSLRDGLRAFAEWY 346 >gi|269797101|ref|YP_003311001.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] gi|269093730|gb|ACZ23721.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] Length = 306 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGGAGFIGS L L+ D V VID L Y GN KE S F+++DI Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGH-TVQVIDNL-YTGN----KEFVHSKA-QFVELDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S L+EF+PD I + AA++ V S+ N++G LL + Sbjct: 54 DPK-LYSVLEEFRPDYIFHEAAQTEVSTSMRDPMLDCDINLMGLINLLN---------TA 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D +FL S+ VYG+LD +E+M NPSS Y TK ++++ + + +G+P + Sbjct: 104 VKLDVKKFLMPSSAAVYGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYI 163 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN +GP +I + +++GS + +YGDG+ RD++YV+D V A L + Sbjct: 164 CYRYSNVFGPRQGNGGEGGVISIFAKAIVQGSPIIIYGDGKQTRDFIYVDDVVEANILGM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G YN+ + I + L+D S +++ + + R G R + Sbjct: 224 QHQVTG-IYNV-------STGISSSVNLLVDEFRNISGKDIDVV-YDKPRLGDIRDSVLA 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + E+ + + N+ GL KT ++ Sbjct: 275 TDKSEKELLFTAKYNLHDGLIKTYEYF 301 >gi|219559871|ref|ZP_03538947.1| hypothetical protein MtubT1_22117 [Mycobacterium tuberculosis T17] gi|260198833|ref|ZP_05766324.1| hypothetical protein MtubT4_01492 [Mycobacterium tuberculosis T46] gi|289441221|ref|ZP_06430965.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289572033|ref|ZP_06452260.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T17] gi|289414140|gb|EFD11380.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289545787|gb|EFD49435.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T17] Length = 326 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGF GS L L+ + V V+DK + + +++ + +F+ + Sbjct: 1 MEILVTGGAGFQGSHLTESLLANGH-WVTVLDK-SSRNAVRNMQGFRSHDRAAFISGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 59 DGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN---- 112 Query: 121 DKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG Sbjct: 113 ------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V + N +G + LIP + + I G + ++G G RD+LYV D V A Sbjct: 167 LDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAY 226 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LVL+ + G+ N + + DIV + A I + RPG + Sbjct: 227 NLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQ 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ D S KS IG+ PQ + +++ + W D + Sbjct: 277 RFPADISLAKS-IGFQPQVEIWDSIDRYINWAKDQPQY 313 >gi|15616211|ref|NP_244516.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] gi|10176273|dbj|BAB07368.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] Length = 311 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 30/329 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS L L+ + +V+++D L+ SLK + S+ ++DI D Sbjct: 3 KVLVTGGAGFIGSHLVDLLIAE-GTEVVIVDNLSSG----SLKHVHPSS--HLFKLDILD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D IV+ AA+S V S+L NI GT LLE +R + Sbjct: 56 ERVADVFQEHPDIDRIVHLAAQSKVGPSVLNPTYDAQVNIQGTIRLLEFSRKYGV----- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 QF F S+ +YG E+ P P SPY +K +++ V +G YG+ V + Sbjct: 111 --KQFVF--ASSAAIYGPSHTLPIREEFPALPLSPYGTSKYAAEAYVKTYGRLYGLNVHV 166 Query: 182 SNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP E +I + I ++++ ++GDG+ RD+++V D V A+ L+ Sbjct: 167 LRFANVYGPRQTAETEAGVISIFIEKLLKNEQPIIFGDGKQTRDFIFVLDVVNAIRSCLE 226 Query: 239 K---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + YN+ + D++ E+ L+ T F ++R G + Sbjct: 227 TETNQEVDPVYNVSTGLQTSVEDLLKELCAQLNV--------TYAPAFEQERSGDIKHSC 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D K++ + W P+ + GL KT+ +Y Sbjct: 279 LDQQKLQKHLTWNPRIALNEGLAKTIAYY 307 >gi|163942955|ref|YP_001647839.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] gi|163865152|gb|ABY46211.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] Length = 330 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 161/338 (47%), Gaps = 34/338 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQVD 58 ++TG AGFIG L + L+ ++ +V+ D L ++ SLKE ++Q N F+F + D Sbjct: 13 LITGAAGFIGMHLSKKLL-EMGCKVIGYDNLNDYYDI-SLKESRLNILNQYNNFTFHKAD 70 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+E + E +VN AA++ V SI D +I +N++G +LE R Sbjct: 71 LTDKEYLEKLFNENNIHIVVNLAAQAGVRYSIENPDAYIQSNVVGFLNILEMCR------ 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + L S+ VYG+ K FS ED NP S Y+ATK S++ + + H Y + Sbjct: 125 -HHKVEHL--LYASSSSVYGANKKIPFSTEDKVDNPVSLYAATKKSNELMAHTYSHLYNV 181 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P YGPY P+ + + T+ I EG + ++ +G RD+ Y++D V + + Sbjct: 182 PTTGLRFFTVYGPYGRPD-MAYFSFTKAITEGKPIKVFNEGDMYRDFTYIDDIVDGIIKL 240 Query: 237 LKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L+ + YNIG N K +D + I + + + +PG Sbjct: 241 LENSPVLNNKELPYKVYNIGNNKPVKLLDFI--------QAIESAVGKEAVKEYYPMQPG 292 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + D S + +++G+ P ++ G+NK V W+ N Sbjct: 293 DVYQTYADVSDLINDVGFKPDTPIQEGINKFVDWFKKN 330 >gi|261420562|ref|YP_003254244.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|319768231|ref|YP_004133732.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] gi|261377019|gb|ACX79762.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|317113097|gb|ADU95589.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] Length = 315 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 27/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIG A+ + L++D V ++D L+ N + NL F+ DI Sbjct: 1 MRILLTGGAGFIGRAVAKRLLDDGH-DVWILDDLSNGREENISEFRHHPNLKQFIVGDIK 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + E + D + AA +V SI + IGTF LLE+ R Sbjct: 60 DERLLAQLFHEHEYDLCYHLAASINVQDSIDDPRTTFYNDTIGTFYLLEQCR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + + +ST VY + G+ +E P P+SPY+ K +++ +VL++ + Y +P Sbjct: 112 --KHRTKLVFMSTCMVYDRCYHETGI-AETHPTKPASPYAGAKIAAENMVLSYFYAYHLP 168 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V++ N YGPY ++ + I + + G + +YGDG RD LYV+D R Sbjct: 169 VVVVRPFNTYGPYQKTSGEGGVVAIFIRKKLMGETLQIYGDGTQTRDLLYVDDCAR---F 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFL-LDALIPKSYSHTELIRFIEDRPGHDRRY 294 V++ G Y+ N E N + +I L LI E + I + ++ Sbjct: 226 VVQAG-----YSDKVNGEIVNAGLGRDISINDLAKLIVGDEKRIEHVPHIHPQ-SEIQKL 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K K +GW PQ ++E G+ KT W Sbjct: 280 LCNYEKAKRLLGWEPQVSLEEGIQKTEEW 308 >gi|163784121|ref|ZP_02179066.1| nucleotide sugar epimerase [Hydrogenivirga sp. 128-5-R1-1] gi|159880612|gb|EDP74171.1| nucleotide sugar epimerase [Hydrogenivirga sp. 128-5-R1-1] Length = 333 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 100/340 (29%), Positives = 158/340 (46%), Gaps = 37/340 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNL-----F 52 +++TG AGFIG + L+ + +V+ ID N+N+ LKE +S L F Sbjct: 6 VLLTGAAGFIGWKTAQLLL-EKGYKVVGID------NMNNYYDPRLKEWRKSQLEKYENF 58 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F VDI + ++ F D +VN AA + V SI+ ++TTN GT LLE + Sbjct: 59 KFFNVDIENLGALKVLFDSFNFDYVVNLAARAGVRYSIVNPHVYLTTNAHGTLNLLELMK 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 + +F+ ST +Y F E++P N P SPY+A+K +++ + + Sbjct: 119 ---------ENSVKKFVLASTSSLYAG-QPMPFKENLPVNTPISPYAASKKAAEVMSYTY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + Y I + + YGP P+ I I + EG+ + L+GDG RD+ YV+D + Sbjct: 169 HYLYDIDISVVRYFTVYGPAGRPDMSIFRFIKWIDEGTPIKLFGDGSQARDFTYVDDIAK 228 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGH 290 L ++K E N+GG ++ + E I LL Y +E Sbjct: 229 GTILAMEKEVGYEIINLGGGKNPISLKTIIEKIENLLGKKAKIDYKPFNKADMMETWA-- 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D K + +GW P+ +++ GL +TV WYLDN W Sbjct: 287 ------DIEKAEKLLGWKPEIDIDEGLKRTVEWYLDNKDW 320 >gi|309784501|ref|ZP_07679139.1| dTDP-glucose 4,6-dehydratase domain protein [Shigella dysenteriae 1617] gi|308927607|gb|EFP73076.1| dTDP-glucose 4,6-dehydratase domain protein [Shigella dysenteriae 1617] Length = 117 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 4/99 (4%) Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS----YSHTELIRFIEDRPGHDRRYA 295 G++GE YNIGG+NERKN+D+V I LL+ L P + +LI F+ DRPGHD RYA Sbjct: 5 GKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVVHYRDLITFVADRPGHDLRYA 64 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 ID+SKI E+GW PQE ESG+ KTV WYL N WW+ + Sbjct: 65 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 103 >gi|258591068|emb|CBE67363.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [NC10 bacterium 'Dutch sediment'] Length = 306 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L + V V+D L+ G + ++ F QVDI Sbjct: 1 MKVLVTGGAGFIGSHVVDALAKEGH-DVAVVDDLS-KGKREQVHPSAR-----FYQVDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+ + + +P+ + + AA+ ++ RS+ + NI+G+ L E L +C + Sbjct: 54 NRQVLEEVFRAERPEVVNHHAAQGNLRRSMTEPSFDASVNIVGSLNLFE---LALACTVR 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-YLVLAWGHTYGIPV 179 +F F+ S VYG + E P P S Y +K + + YL L G G+ Sbjct: 111 ----KFVFIS-SGGAVYGEPQRLPVDERHPTCPMSAYGLSKYTVEQYLRLFDGS--GLDY 163 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +N YGP P ++ + +M+ G ++GDG RD++YV D V A L Sbjct: 164 TILRYANVYGPRQDPTGEAGVVAIFSRQMLAGERPTIFGDGTKTRDYVYVGDVVAANLLA 223 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + KG G YNIG E + I FE L+ + T RPG R Sbjct: 224 MTGKGASGRSYNIGLGREVSDWQI-FE-------LVRSAVGATLEPILATKRPGEIDRIC 275 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D+S K+E+GW P ++E G+ +TV +Y Sbjct: 276 LDASLAKTELGWEPAMSLEEGMARTVAFY 304 >gi|116622123|ref|YP_824279.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116225285|gb|ABJ83994.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 681 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/353 (28%), Positives = 160/353 (45%), Gaps = 48/353 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIG+ L L+ + VL+ D L+ +G N+ L+E S + DI Sbjct: 329 LITGGAGFIGTNLADRLLTAGR-NVLIYDDLSRSGSERNVAWLRE-SHGERLNVEIADIR 386 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+ +R+A++E D + +FAA+ V S++ N+ GT LLEE R Sbjct: 387 NRQSLRTAVRE--ADQVFHFAAQVAVTSSLVDPLHDFEVNVGGTVNLLEEIR------RL 438 Query: 121 DKKDQFRFLQISTDEVYGSL---------------DKGL---FSEDMPYNPSSPYSATKA 162 D F ST++VYG L D L SE+ P + SPY +K Sbjct: 439 DNPPPLLF--TSTNKVYGGLPDLALEKSSARYQPLDAALRTGISEERPLDFHSPYGCSKG 496 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQN 219 ++D V + T+G+P ++ S YG + + + + R +EG + L+GDG Sbjct: 497 AADQYVRDYARTFGLPAVVFRMSCIYGLHQMGNEDQGWVAHFLIRALEGKPITLFGDGMQ 556 Query: 220 VRDWLYVEDHVRALYLVLKKGRI--GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSY 275 VRD L+V+D V A L G+ +NIGG N ++++ I D Sbjct: 557 VRDILFVDDLVDAFLLAQANIHTLAGQAFNIGGGLGNTISLLELLELIERFRD------- 609 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++R RP R Y D+ K K+ GW P+ G+ + W ++ Sbjct: 610 -EKPIVRLKPARPSDQRYYVSDTRKFKAATGWAPKVTAREGVERLFQWLAESR 661 >gi|188586990|ref|YP_001918535.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351677|gb|ACB85947.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 314 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 30/322 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS + L+ D +V+++D L+ N I +S F +C Sbjct: 15 VLITGGAGFIGSYVAGLLI-DQGYRVVIVDDLSTGQTGN----IPESAAF----YSLCIT 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + S + +P +++ AA+ V +S+ +E N++G LL+E Sbjct: 66 EDLSSIFLKEKPHYVIHMAAQVSVSKSLEDPEEDAKINLMGGLNLLQEA---------SN 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ ST VYG + E+ P SPY K + + + ++ G+ + Sbjct: 117 NGVEKFVYASTAAVYGDPSELPLKEEHEKKPLSPYGINKLAFEQYLESYRVNLGMDYTVL 176 Query: 183 NCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +N YGP P ++ + + R+ +G + ++GDG RD++YVED RA L L++ Sbjct: 177 RYANVYGPRQVPGADGGVVAVFMDRIKKGLPLIIHGDGSQTRDFVYVEDAARANLLALER 236 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G G+ +N+G E ++V + +L +P Y++ RPG R +S Sbjct: 237 GS-GQVFNVGYGEETSISELVDSLARILGRELPYEYTNR--------RPGDIYRSVFNSE 287 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 K ++ +G+ Q ++ESGL KTV Sbjct: 288 KARTNLGFQAQHSLESGLIKTV 309 >gi|150391180|ref|YP_001321229.1| NAD-dependent epimerase/dehydratase [Alkaliphilus metalliredigens QYMF] gi|149951042|gb|ABR49570.1| NAD-dependent epimerase/dehydratase [Alkaliphilus metalliredigens QYMF] Length = 315 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 29/327 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L R ++ L + VID L+ + I S +F++ I ++ Sbjct: 5 VLVTGGAGFIGSQLIRKIL-PLSQHIYVIDDLSTGRR----EAIPISPKITFIEDSITNK 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ + + + V A S++ +S+ D TN++G F+LL+ +++ S L Sbjct: 60 KVLKNIIPKVE---YVFHLACSNILKSVDDLDLDFHTNLLGGFLLLQSAKIYGSNLK--- 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 RF+ ST +YG +ED Y S PY+A+K S+++ + H Y +PV + Sbjct: 114 ----RFVYASTTSIYGDAANIPTTEDY-YKISLPYAASKFSTEHYCSVYYHMYQLPVTVL 168 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSH----VFLYGDGQNVRDWLYVEDHVRALYLV-L 237 SN YGP + + E + +YGDG RD+ ++ED + A LV + Sbjct: 169 RLSNVYGPGQTSSNPYCGVVAKFFEAVEKNEPLVIYGDGHQTRDFTFIEDALDAFLLVTI 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-DRRYAI 296 + IG+ YN+G E I + EI + + S L F RP R I Sbjct: 229 NEEAIGQVYNVGTGMETPIIKLAKEIKTV-------TGSTQNLKAFKGKRPVDIVARRNI 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 DS KI+ E+ W ++ GL KT W Sbjct: 282 DSLKIQMELQWRINHSLSEGLEKTFKW 308 >gi|295401171|ref|ZP_06811144.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|294976764|gb|EFG52369.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] Length = 331 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 97/336 (28%), Positives = 155/336 (46%), Gaps = 29/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQV- 57 M++++TG GFIGS L LV Q + Y + NS + S ++ L+V Sbjct: 1 MKILITGADGFIGSHLTEELVR----QGYDVKAFVYYNSFNSWGWLDTSPESIKKELEVF 56 Query: 58 --DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D ++ A+K D +++ A+ + S D ++ TNI GT +L+ R Sbjct: 57 AGDIRDPHGVKEAMKGC--DVVLHLASLIAIPYSYHSPDTYVDTNIKGTLNVLQAAR--- 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D + + ST EVYG+ E+ P SPYSA+K +D + +A+ ++ Sbjct: 112 ------ELDIQKVVHTSTSEVYGTAQYVPIDENHPLQGQSPYSASKIGADQMAIAFYRSF 165 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 PV + N YGP +IP IT++ G G RD+ YV+D V Sbjct: 166 ETPVAIIRPFNTYGPRQSARAVIPTIITQIASGKRKIKLGSLHPTRDFNYVKDTVNGFIS 225 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+K IGE NIG N E + I + + + T+ R ++ +R + Sbjct: 226 VMKHDESIGEVINIGSNFE---VSIGETAKLIAEIMGVDIEIETDDARIRPEKSEVERLW 282 Query: 295 AIDSSKIKSEIGWFP----QENMESGLNKTVCWYLD 326 A D+SK K+ +GW P +E + GL +T+ W+ D Sbjct: 283 A-DNSKAKALLGWEPAYGGKEGFKRGLKETIEWFTD 317 >gi|222153176|ref|YP_002562353.1| nucleotide sugar epimerase [Streptococcus uberis 0140J] gi|222113989|emb|CAR42294.1| putative nucleotide sugar epimerase [Streptococcus uberis 0140J] Length = 356 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 42/353 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKE--ISQSNLFS------ 53 + +TG AGFIGS L L+ + +++ +D + ++ SLKE +SQ N S Sbjct: 11 IFITGAAGFIGSNLVLELLKSGEANLIIGLDNMNDYYDV-SLKEFRLSQINDLSQDSASK 69 Query: 54 --FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F++ I D+E I ++ P+ +VN AA++ V SI D +I +NIIG + +LE Sbjct: 70 WKFIKGSIADKELIEEVFLQYHPEIVVNLAAQAGVRYSITNPDVYIESNIIGFYNILEAC 129 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + + S+ VYGS K +S ED P S Y+ATK S++ L + Sbjct: 130 RHYPVE---------HLVYASSSSVYGSNAKIPYSTEDKVDTPVSLYAATKKSNELLAHS 180 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++++G + ++ G RD+ YV+D V Sbjct: 181 YSKLYNIPTTGLRFFTVYGPAGRPDMAYFGFTNKLMKGETIQIFNYGNCKRDFTYVDDIV 240 Query: 231 RALYLVLKKGRIGER------------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY- 275 + + LV+ E+ YNIG ++ +D V + + ++P+ Y Sbjct: 241 KGVVLVMNGAPKQEQGPDGLPIPPYAIYNIGNSHPENLLDFVTILQEELIAAGVLPEEYD 300 Query: 276 --SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 SH EL+ +PG D+S ++ + G+ P ++ GL K WY D Sbjct: 301 FESHKELVAM---QPGDVAITYADTSALEKDFGYKPNTSLREGLRKFSEWYYD 350 >gi|163758304|ref|ZP_02165392.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] gi|162284593|gb|EDQ34876.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] Length = 326 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 39/332 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS LCR L+ V+VID L Y NL+ +I+ F++ D Sbjct: 18 MKALVTGGAGFIGSNLCR-LLRSHGHDVVVIDSLLSGYRRNLDFDPDIT------FMEAD 70 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSI----LGADEFITTNIIGTFILLEETRLW 114 I D + + +A+ D + + AA RSI L AD N++GT L+E R Sbjct: 71 IRDAKAVEAAVDGC--DVVFHLAAAVGNKRSIDDPRLDAD----INVMGTVTLMEAAR-- 122 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K R + S+ ++G L K SED P +P SPY A+K + L++ Sbjct: 123 -------KAGVGRVVVSSSAGIFGELKKLPISEDHPIDPDSPYGASKLFKEKFSLSYSKL 175 Query: 175 YGIPVLLSNCSNNYG---PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y I V+ N YG + +IP+ +M+ G + ++GDG+ RD++ V+D + Sbjct: 176 YDIGVVALRYFNVYGINQRFDAYGNVIPIFAYKMLRGEPITVFGDGEQTRDFVNVQDVAQ 235 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A Y + +N+ G+ R I+ + E ++ + + + RPG Sbjct: 236 ANYQAGLAEGVSGAFNL-GSGTRITINKLIE-------MMQEVSGIKATVEYGPPRPGDV 287 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D S ++ +G+ P + E+GL + W Sbjct: 288 RDSLADISAARASLGFSPSADFEAGLRDYMAW 319 >gi|293553242|ref|ZP_06673879.1| nucleoside-diphosphate-sugar epimerase [Enterococcus faecium E1039] gi|291602652|gb|EFF32867.1| nucleoside-diphosphate-sugar epimerase [Enterococcus faecium E1039] Length = 315 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 165/337 (48%), Gaps = 38/337 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 4 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMEKQV------TFIEGDVS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE+Q I + AA + V S+ E N +LLE R + S L Sbjct: 56 DPQLMERIMKEYQFAYIFHLAAVASVADSVERPLETHRVNFDSALLLLELVRKYQSGLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 115 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKAEFTLFGDGSQSRDFVYIEDVIQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 229 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D SKI+S +G+ P+ ++ +G+ + + +D Sbjct: 280 DIRDSLADISKIRS-LGYQPKFDILNGMERYLKTEID 315 >gi|297544168|ref|YP_003676470.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841943|gb|ADH60459.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 312 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 160/334 (47%), Gaps = 38/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS-FLQVDI 59 M+++VTGGAGFIG + + L+ D +V ++D L+ G ++ E S + L F+ DI Sbjct: 1 MKILVTGGAGFIGRWVVKKLLEDGH-EVWILDNLS-NGRRENIDEFSCNPLLKDFIIGDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + K + D + AA +V SI + +GTF +LE+ R Sbjct: 59 KDNELLTDIFKN-KFDICYHLAASINVQDSIDDPKTTFYNDTVGTFNVLEQAR------- 110 Query: 120 QDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + +ST VY + D+ +ED P P+SPY+ +K +++ +VL++ +TY +P Sbjct: 111 ---KHNTKITFMSTCMVYDRATDESGITEDHPTKPASPYAGSKIAAENMVLSYWYTYKLP 167 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V++ N YGP+ ++ + I +EG + +YGDG RD LYVED R Sbjct: 168 VVVVRPFNTYGPFQKTNGEGGVVAIFIKNALEGKTLNIYGDGTQTRDLLYVEDCAR---F 224 Query: 236 VLKKG----RIGERYNIGGNNERKNIDIVFEIGF--LLDALIPKSYSHTELIRFIEDRPG 289 V++ G GE N G + D+ I L +P + +E+ + + Sbjct: 225 VVEAGYSDKTNGEIINAGSGRDISINDLALLIAKDEKLIKHVPHIHPQSEIQKLL----- 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + SK + +GW PQ +E G+ KT W Sbjct: 280 ------CNYSKAERLLGWKPQYTLEEGIKKTREW 307 >gi|225165899|ref|ZP_03727668.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224799861|gb|EEG18321.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 346 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 102/341 (29%), Positives = 154/341 (45%), Gaps = 36/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++VTGGAGFIGS LC L+ D ++V+D Y L L I + L + +Q Sbjct: 21 KILVTGGAGFIGSHLCEALLADGH-HLVVLDDFNDYYPPALKHAHLAPI-RDQLDALVQA 78 Query: 58 DICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D I P A+ + AA + V SI +++TNI GT LLE + Sbjct: 79 DIRDPAAIERTFATHHPIHAVYHLAARAGVRPSIHSPRLYLSTNIDGTLNLLE------A 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 C + D F+ S+ VYG+ K F+E P + SPY+A+K +++ L + H + Sbjct: 133 CRAHHVPD---FILASSSSVYGANPKTPFAETDPIQRTLSPYAASKLAAEQLCSNYAHLH 189 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ L YGP P+ I + +G + LYGDG RD+ YV+D ++ L Sbjct: 190 GLRCLCLRLFTVYGPRQRPDLAIARFTAAIRDGRPIDLYGDGTTARDYTYVDDIIQGL-- 247 Query: 236 VLKKGR--------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 L GR E +N+G + ++V LI + LIR ++ Sbjct: 248 -LAAGRRTATLPPATFEIFNLGESATTTLNELV--------TLIENALGRPALIRRQPEQ 298 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 PG R D SK + +G+ P G+ K + W N Sbjct: 299 PGDVPRTYADISKARRLLGYAPATLPADGIRKYIRWLETNQ 339 >gi|171686508|ref|XP_001908195.1| hypothetical protein [Podospora anserina S mat+] gi|170943215|emb|CAP68868.1| unnamed protein product [Podospora anserina S mat+] Length = 248 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 13/197 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFI L R+L ++ DKL Y +LN+ + ++ F+F Q DI Sbjct: 54 IMITGGAGFIACWLVRHLTLTYPHAYNIVSFDKLDYCSSLNNTRVLNDRRNFTFHQGDIT 113 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L+ + D I +FAA+SHVD S + F TN+ GT +LLE S Sbjct: 114 NPSEVLGCLERYNIDTIFHFAAQSHVDLSFGNSYGFTHTNVYGTHVLLE---------SA 164 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K RF+ ISTDEVYG + D E P++PY+A+KA+++ LV ++ ++ +P Sbjct: 165 KKVGIKRFIHISTDEVYGEVKDDDDDLLETSILAPTNPYAASKAAAEMLVHSYQKSFKLP 224 Query: 179 VLLSNCSNNYGPYHFPE 195 V++ +N YGP+ +PE Sbjct: 225 VIIVRSNNVYGPHQYPE 241 >gi|153806446|ref|ZP_01959114.1| hypothetical protein BACCAC_00710 [Bacteroides caccae ATCC 43185] gi|149131123|gb|EDM22329.1| hypothetical protein BACCAC_00710 [Bacteroides caccae ATCC 43185] Length = 351 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/346 (29%), Positives = 164/346 (47%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 ++VTG AGFIGS L + L+ND K I+V+ +D +T ++N KE + +SF++ Sbjct: 13 ILVTGAAGFIGSNLAKRLINDYKDIKVIGLDTMTDYYDVNIKKERLRGIEALGGNWSFVE 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I ++E I + + +VN AA++ V SI D +I +N+IG + +LE R Sbjct: 73 ESIANKEVIDKIFTKNRISVVVNLAAQAGVRYSITNPDAYIQSNLIGFYNILEACR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D + S+ VYGS K +S ED NP S Y+ATK S++ + A+ Y Sbjct: 129 ---HHEVDHLVY--ASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++ EG + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTNKLREGKTIQIFNYGNCKRDFTYVDDIVEGVLR 243 Query: 236 VLK------KGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 V++ G G + YNIG N+ +D V + + ++P Y +H Sbjct: 244 VMQHAPEKANGEDGLPIPPYKVYNIGNNSPENLLDFVTILQEELIRAGVLPFDYDFDAHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P + GL K WY Sbjct: 304 ELVPM---QPGDVPVTFADTTPLEDDFGYKPNTPLREGLRKFSEWY 346 >gi|205375018|ref|ZP_03227809.1| NAD-dependent epimerase/dehydratase family protein [Bacillus coahuilensis m4-4] Length = 316 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 32/327 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L +L++ + +V+V+D L+ N L++ NL F+Q D+ R Sbjct: 4 ILVTGGAGFIGSHLVDHLLHRGE-KVVVLDDLSMGSKTN-LQD--HENLI-FIQGDLSHR 58 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I+ + + + A + V S+ E TN+ GT LLEE R S Sbjct: 59 LTIQEVFAQHSFKKVFHLGAIASVAASVEHPFETHQTNLEGTLYLLEEVRKVGSIE---- 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 RF+ S+ VYG E P +PY+ K +S+ VLA+ YGIP + Sbjct: 115 ----RFVFASSAAVYGDEPTLPKREKSEIRPLTPYAIDKFASEQYVLAYSRLYGIPTAAT 170 Query: 183 NCSNNYG-------PYHFPEKLIPLAITRMIEGSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YG PY +I +++ G L+GDG+ RD++YVED ++AL Sbjct: 171 RFFNVYGTRQNPSSPYSGVISIITDRFKKLMNGEETIFTLFGDGKQTRDFVYVEDVIQAL 230 Query: 234 YLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + + IG +N+G E +D++ +++ K S T I E+R G D Sbjct: 231 TLVSENEEAIGRVFNVGTGKETSLVDMI--------SILEKITSTTLPIDQKEERAG-DI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNK 319 +++ IG+ P +ME+GL K Sbjct: 282 KHSYSCIDDLESIGFNPHYSMEAGLRK 308 >gi|15643275|ref|NP_228319.1| UDP-glucose 4-epimerase, putative [Thermotoga maritima MSB8] gi|4981021|gb|AAD35594.1|AE001727_6 UDP-glucose 4-epimerase, putative [Thermotoga maritima MSB8] Length = 309 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 166/330 (50%), Gaps = 32/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V+V+D L+ +G + +L + F + I Sbjct: 1 MNILVTGGAGFIGSHVVDKLIEN-GYGVIVVDNLS-SGKVENLNRNAL-----FYEQSIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +P+ + + AA++ V S+ TNIIG+ +LLE++ + Sbjct: 54 DEEMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVK--- 110 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F+ ST +YG K + ++P+ P SPY K S++ + + YG+ Sbjct: 111 ------KFIFSSTGGAIYGENVKVFPTPETEIPH-PISPYGIAKYSTEMYLEFFAREYGL 163 Query: 178 PVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +N YGP P ++ + RM+ G V ++GDG+ VRD++YV+D VRA Sbjct: 164 KYTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANL 223 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L ++KG E +NI G ++ +F+ L+ + + + + R G R+ Sbjct: 224 LAMEKGD-NEVFNI-GTGRGTTVNQLFK-------LLKEITGYDKEPVYKPPRKGDVRKS 274 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +K K ++GW P+ ++E GL TV ++ Sbjct: 275 ILDYTKAKEKLGWEPKVSLEEGLKLTVEYF 304 >gi|294615284|ref|ZP_06695160.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1636] gi|294619049|ref|ZP_06698544.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1679] gi|291591842|gb|EFF23475.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1636] gi|291594710|gb|EFF26092.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1679] Length = 315 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 165/337 (48%), Gaps = 38/337 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 4 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMEKQV------TFIEGDVS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +K++Q I + AA + V S+ E N +LLE R + S L Sbjct: 56 DPQLMERIMKQYQFAYIFHLAAVASVADSVERPLETHRVNFDSALLLLELVRKYQSGLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +S+ VL + H Y +P Sbjct: 115 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFASEQYVLDYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKTEFTLFGDGSQSRDFVYIEDVIQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 229 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D SKI+S +G+ P+ ++ +G+ + + +D Sbjct: 280 DIRDSLADISKIRS-LGYQPKFDILNGMERYLKTEID 315 >gi|171910199|ref|ZP_02925669.1| NAD-dependent epimerase/dehydratase [Verrucomicrobium spinosum DSM 4136] Length = 320 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 162/330 (49%), Gaps = 21/330 (6%) Query: 1 MRLIVTGGAGFIGS-ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS + R L ++ +L YA ++ + + + ++ D+ Sbjct: 1 MKVLVTGGAGFIGSHTVERLLAQGAEVGILDNFNDYYAPDIKRHNISAVQDRITLVEGDL 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + A E + DA+++ AA + V SI + +I TNI GTF LLE +C Sbjct: 61 RDPEVVERAFAEGKYDAVIHLAARAGVRPSIEQPELYIDTNIKGTFYLLE------ACKR 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ S+ VYG K F+E+ P SPY+ TK + + + + YGI Sbjct: 115 HGVK---KFVFASSSSVYGVNKKVPFAEEDPILQTISPYAMTKMAGEQMCSNYSTLYGIR 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 + YGP P+ I ++E + YG G RD+ ++ D V + L Sbjct: 172 CVCLRFFTVYGPRQRPDLAISKFTRLILEDKPIDRYGKGDTARDYTFISDIVDGIIGALN 231 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++G + +N+GG+ + +++ IG + DAL K+ +I + ++PG + Sbjct: 232 YEEGPLCSIFNLGGS---QTVNLNQMIGAIEDALGKKA-----MINEMPEQPGDVPLTSA 283 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK + + P ++++G+ K V W+L+ Sbjct: 284 DVSKASKLLNFKPTTHLDTGIPKFVEWFLE 313 >gi|124485719|ref|YP_001030335.1| hypothetical protein Mlab_0897 [Methanocorpusculum labreanum Z] gi|124363260|gb|ABN07068.1| NAD-dependent epimerase/dehydratase [Methanocorpusculum labreanum Z] Length = 337 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 30/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVD 58 +++TG AGFIG L + L+ + IQV+ D + ++N L + F F++ D Sbjct: 6 ILITGAAGFIGFHLSKKLL-EQGIQVIGYDNINSYYDVNLKYARLAILKDYPDFIFVKGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ + + +++PD +VN AA++ V SI +I +NIIG F +LE R Sbjct: 65 LADKSEVENVFTKYKPDIVVNLAAQAGVRYSIDNPQVYIDSNIIGFFNILEACR------ 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ +K FS D + P S Y+ATK S++ + + H YGI Sbjct: 119 ---HHPAEHLIYASSSSVYGNQEKTPFSTDDDVSRPISLYAATKKSNELMAYTYSHLYGI 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGPY P+ +++ G + ++ +G RD+ Y++D V+ + +L Sbjct: 176 PTTGLRFFTVYGPYGRPDMAYFSFTRKILAGETIQIFNNGDMYRDFTYIDDIVQGIENML 235 Query: 238 KKGRI----GER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + G+R YNIG N+ K + + ++ L K F+ +PG Sbjct: 236 EHPPAADENGDRYKLYNIGNNHPEK-------LMYFIEVL-EKCIGREAKKEFLPMQPGD 287 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + + G+ P+ ++E GL K V WY Sbjct: 288 VYQTYADVDDLVWDFGFKPETSVEVGLGKFVEWY 321 >gi|18978160|ref|NP_579517.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] gi|18893965|gb|AAL81912.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] Length = 307 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 36/327 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + LV + +V+VID L Y+G + ++ + ++ F++ DI D Sbjct: 6 VVVTGGAGFIGSHIAEALVEEN--EVIVIDNL-YSGKIENIPQGAK-----FIEADIRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I ++E D + + AA+ V+ S+ D T N+IGT +L+ LS+ Sbjct: 58 SSIAEIIRE--ADYVFHEAAQISVEESV--RDPIFTDEVNVIGTLNILK-------ALSE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG ED P SPY +K + ++ V + YG+P + Sbjct: 107 GSG---KIIFASSAAVYGENKNLPLKEDYLPKPISPYGVSKLAGEHYVRVFYELYGVPGV 163 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +I + + ++ + ++GDG+ RD++YV+D V+A LV + Sbjct: 164 ILRYFNVYGPRQSSAYAGVISIFMKNALKNEPLVIFGDGKQTRDFIYVKDVVQANLLVAE 223 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K R G+ +N+ E +++ +I L S + I F +RPG +R D Sbjct: 224 KERANGKIFNVATGKETSILELALKIIDLT--------SSSSQILFAPERPGDIKRSVAD 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++I+ ++G+ P ++E GL +T+ W+ Sbjct: 276 INEIR-KLGFEPSYSLEEGLKETLEWF 301 >gi|313902633|ref|ZP_07836032.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] gi|313467071|gb|EFR62586.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] Length = 298 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 27/301 (8%) Query: 26 IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESH 85 ++VL +D + AG + + ++ L DI + + ++F+P+A+++ AA+ Sbjct: 10 VEVLAVDDFS-AGRVRRIAGVTVERL------DITQAGEVAAVFRDFRPEAVIHLAAQVS 62 Query: 86 VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF 145 V+RS+ D+ + N+ GT L+ E ++ + R + S+ VYG + Sbjct: 63 VERSLERPDQDVDVNVYGTLNLVRE------AVAAGTR---RVVFASSAAVYGDPQRLPV 113 Query: 146 SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAIT 203 ED P P S Y +K ++++L+ + G+ ++ N YGP PE ++ Sbjct: 114 DEDHPLKPLSVYGRSKLAAEWLIQQYAQGTGLEAVILRLGNVYGPGQRPETGPVVARFFL 173 Query: 204 RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 + G ++GDGQ RD++YV D RA L L G G NI G ++ I Sbjct: 174 DALSGRGPVIHGDGQQTRDFVYVGDVARAFVLAL-AGPAGVVANIAGGRATAIGELAQRI 232 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G L+ + + R+ RPG R + S + + +GW P+ +E GL T W Sbjct: 233 GRLV--------AGSPAPRYGPPRPGDIRHSVLSSDRARRLLGWTPRVGLEEGLAATYQW 284 Query: 324 Y 324 Y Sbjct: 285 Y 285 >gi|253563862|ref|ZP_04841319.1| nucleotide sugar epimerase [Bacteroides sp. 3_2_5] gi|251947638|gb|EES87920.1| nucleotide sugar epimerase [Bacteroides sp. 3_2_5] Length = 352 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLT--YAGNLN--SLKEI-SQSNLFSFLQ 56 ++VTG AGFIGS L + L+ D I+V+ ID +T Y NL L EI S S ++FL+ Sbjct: 13 ILVTGAAGFIGSNLVKRLLTDFDNIKVIGIDSITDYYDVNLKYERLTEIDSLSKDWTFLK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D+ I + E + D +VN AA++ V SI +I +N+IG + +LE R Sbjct: 73 GSIADKALIENVFTENKIDVVVNLAAQAGVRYSITNPGSYIESNLIGFYNILEVCR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 129 -----HHEVAHLVYASSSSVYGSNKKIPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTNKLVKGETIKIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 V++ R GE YNIG N +D V + + ++P Y +H Sbjct: 244 VMRHAPERRTGEDGLPVPPYIIYNIGNNQPENLLDFVTILQEELVRAGVLPAEYDFEAHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ + + + P + GL K WY Sbjct: 304 ELVPM---QPGDVPVTYADTTPLVQDFDFKPSTPLREGLCKFAEWY 346 >gi|301162532|emb|CBW22078.1| putative NAD dependent epimerase [Bacteroides fragilis 638R] Length = 352 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLN--SLKEI-SQSNLFSFLQ 56 ++VTG AGFIGS L + L+ D I+V+ ID +T Y NL L EI S S ++FL+ Sbjct: 13 ILVTGAAGFIGSNLVKRLLTDFNNIKVIGIDSITDYYDVNLKYKRLTEIDSLSKDWTFLK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D+ I + E + D +VN AA++ V SI +I +N+IG + +LE R Sbjct: 73 GSIADKALIENVFTENKIDVVVNLAAQAGVRYSITNPGSYIESNLIGFYNILEVCR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 129 -----HHEVAHLVYASSSSVYGSNKKIPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTNKLVKGETIKIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 V++ R GE YNIG N +D V + + ++P Y +H Sbjct: 244 VMRHAPERRTGEDGLPVPPYIIYNIGNNQPENLLDFVTILQEELVRAGVLPAEYDFEAHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ + + + P + GL K WY Sbjct: 304 ELVPM---QPGDVPVTYADTTPLVQDFDFKPSTPLREGLCKFAEWY 346 >gi|300786859|ref|YP_003767150.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] gi|299796373|gb|ADJ46748.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] Length = 300 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 30/316 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG+GFIG + R L D + V V+D++ + +L+ ++ ++ Sbjct: 1 MVVTGGSGFIGRVVVRAL-RDRGVPVTVVDRVPFPEDLDGVRVVTGD----------LRE 49 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + IV+ AA + V +S+ ++ N++ T LLE R + Sbjct: 50 AAVREQAVTGETAGIVHLAALTSVLKSVELPEDTFADNVLVTQELLELAR---------R 100 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 ++ +FL ST+ V G + + D+P P +PY ATKA+ + L+ + YG+ Sbjct: 101 REVPKFLLASTNAVIGDVGTATITPDLPLRPLTPYGATKAACEMLLSGYAGAYGMTTCAL 160 Query: 183 NCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +N YGP + +P + + G+ + +YGDG+ RD ++V+D VRA+ L L G Sbjct: 161 RFTNVYGPGMSHKDSFVPRMMRAALTGTGIRVYGDGRQRRDLVHVDDVVRAILLALDSGY 220 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G R +G +++V + + A +P + +E G +D S Sbjct: 221 SG-RAIVGAGRSVSVLEMVEAVREVTGAELP--------VEHVEAPAGEMPAVVVDVSAS 271 Query: 302 KSEIGWFPQENMESGL 317 IG+ P+ ++ GL Sbjct: 272 AETIGYRPEVSLTEGL 287 >gi|237745883|ref|ZP_04576363.1| dTDP-glucose 4,6-dehydratase [Oxalobacter formigenes HOxBLS] gi|229377234|gb|EEO27325.1| dTDP-glucose 4,6-dehydratase [Oxalobacter formigenes HOxBLS] Length = 109 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 54/107 (50%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHT 278 +RDWLYV DH +A+ L+ +G+ GE YN+GG+NER N+ IV + +LD P K + Sbjct: 1 MRDWLYVLDHCKAIDLIYHQGKSGETYNVGGHNERHNLQIVHAVCRILDEKKPRKEGKYA 60 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +LI F+ DRPGHD RYAID++K+ E+GW +EN ++G+ KTV WYL Sbjct: 61 DLISFVTDRPGHDLRYAIDATKLTEELGWRAEENFDTGIVKTVEWYL 107 >gi|307823494|ref|ZP_07653723.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307735479|gb|EFO06327.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 326 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 151/334 (45%), Gaps = 35/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSFLQVDI 59 ++VTG GFIGS L L Q I L+ + N L+E+ + L D+ Sbjct: 4 ILVTGADGFIGSHLTEMLAK----QGHQIKALSQYNSFNHWGWLEEVDCLDQIEVLNGDV 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + K D I + AA + S + D ++ TNI GT + C + Sbjct: 60 RDPHYCKHITKGI--DVIYHLAALIAIPYSYVAPDSYVDTNIKGTLNI---------CQA 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST EVYG+ E P P SPYSA+K ++D + +++ + + +P+ Sbjct: 109 ALDNQVQRVIHTSTSEVYGTAQYVPIDEKHPMQPQSPYSASKIAADAMAMSFYNAFELPL 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT++ G GD RD+ YVED R + + Sbjct: 169 TIARPFNTYGPRQSARAVIPTIITQIAGGKKQIQLGDVSPTRDFNYVEDTCRGFIALAES 228 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR-- 292 + +GE NIG N+E IG L+ I K+ H++ + FI D RP Sbjct: 229 DKTLGETVNIGSNSE-------ISIGDTLN--IIKNIMHSD-VEFIVDEQRLRPEKSEVN 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D+ KIK+ G+ + ++ GL TV W+L+ Sbjct: 279 RLWCDNKKIKALTGFESRIDITEGLRLTVDWFLN 312 >gi|257387487|ref|YP_003177260.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] gi|257169794|gb|ACV47553.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] Length = 328 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 32/347 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI---------SQSNL 51 M+++VTGGAGFIG + V D V+ +D L +++ + S Sbjct: 1 MKILVTGGAGFIGGHIAERFVVDGH-DVVALDNLDPFYDVDIKRHTIERCREHASSGDGR 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + ++ D+ D + + + + D + + AA++ V +S+ ++ N+ GT LL+ Sbjct: 60 YELVEGDVRDADLVSELVAD--ADYVYHQAAQAGVRQSVENPRKYDEVNVDGTLNLLDAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + RF+ S+ VYG + E+ P P SPY A+K +++ V A+ Sbjct: 118 R---------ETGIERFVMASSSSVYGKPRYLPYDEEHPTTPVSPYGASKLAAERYVCAY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y + + YGP P I ++R ++G +YGDG RD+ +VED V Sbjct: 169 SEVYDLSAVALRYFTVYGPRMRPNMAISNFVSRCLDGRSPVVYGDGSQTRDFTFVEDVVE 228 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + L+ GE N+G + NI+I + D L P +L EDR Sbjct: 229 ANVALLDTDAADGEAINVGSTD---NIEIETLAEEIRDQLAP------DLDLVYEDRHDA 279 Query: 291 DRRYAIDSSKIKSE-IGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 D + S++ +E +G+ P+ + G++ + WY +N W+ PL + Sbjct: 280 DAEHTHASTERAAELLGYEPEYTIREGVSAFIDWYRENREWYEPLVR 326 >gi|326792642|ref|YP_004310463.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] gi|326543406|gb|ADZ85265.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] Length = 327 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 19/329 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV + +++ + G+L+SL + S N DI Sbjct: 4 KILVTGADGFIGSHLTEQLVKEGYRVRAFTYYNSFNNWGHLDSLDK-SILNEVEIFTGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R A+K+ D + + AA + S D ++ TNI GT +L+ R + + Sbjct: 63 RDPNGVRQAMKDI--DQVYHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQAARDFGTS-- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + L ST EVYG+ E P+ SPYSATK +D L ++ ++ +P+ Sbjct: 119 -------KILITSTSEVYGTAQYVPIDEKHPFQGQSPYSATKIGADRLAESFYRSFNMPI 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP IT++++G G RD+ YV+D + + K Sbjct: 172 SIVRPFNTYGPRQSARAVIPTIITQLLKGEKHIKLGSLAPTRDFNYVKDTAQGFIEIAKS 231 Query: 240 G-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 IGE NI E ++ E L++ + P + E R ++ +R + Sbjct: 232 NMAIGEEINIATGIEISIGELAQE---LINQINPSATIICEEERLRPEKSEVNRLLGCN- 287 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 KIK+ W P+ ++ SGL +T+ W+ D+ Sbjct: 288 KKIKALTNWVPEYSLSSGLAETIEWFKDH 316 >gi|45658051|ref|YP_002137.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601292|gb|AAS70774.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 329 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 165/358 (46%), Gaps = 49/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGGAGFIGS L L+ + + +V V+D + A NLN +KE ++D Sbjct: 1 MKALVTGGAGFIGSHLVDLLLEN-QFEVTVLDNFSTGRAFNLNHVKE----------KID 49 Query: 59 I--CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + CD +K+FQ D + + AA + + SI + + +N+ GT +L+ +R + Sbjct: 50 LVECDLSIQEDWIKKFQSVDYVFHLAALADIVPSIQNPEGYFQSNVTGTLNVLQASRHYG 109 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RF+ ++ YG + E P P PY+ TK + LV+ W Y Sbjct: 110 VK---------RFVYAASSSCYGIPELYPTPETSPILPQYPYALTKRMGEELVMHWVQVY 160 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 P L N YGP + + + + + G + GDG+ RD+ YV+D Sbjct: 161 KFPALSLRFFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPFTVVGDGKQTRDFTYVQDVAE 220 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++ + ++GE YN+ G+ +++ + E LL + +I RPG Sbjct: 221 AVFAAAQSDKVGEIYNV-GSGATISVNRIVE---LLKG----------EVTYIPKRPGEP 266 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 D +KIK ++ W P+ ++E+G+ + L N +WR P++ K + S W Sbjct: 267 DSTFADIAKIKKDLKWSPKISIETGIGE----LLKNIDYWREAPVWTPDKIEKATSDW 320 >gi|257899022|ref|ZP_05678675.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium Com15] gi|257836934|gb|EEV62008.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium Com15] Length = 318 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 38/330 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 7 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMEKQV------TFIEGDVS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE+Q I + AA + V S+ E N +LLE R + S L Sbjct: 59 DPQLMERIMKEYQFAYIFHLAAVASVADSVERPLETHRVNFDSALLLLELARKYQSDLK- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 118 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTS 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 172 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKAEFTLFGDGIQSRDFVYIEDVIQ 231 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 232 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 R D SKI+S +G+ P+ ++ SG+ + Sbjct: 283 DIRDSLADISKIRS-LGYKPKFDILSGMER 311 >gi|303238691|ref|ZP_07325224.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] gi|302593810|gb|EFL63525.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] Length = 347 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 26/339 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQV 57 +++TG AGFIGS L R L+ + I+++ ID + Y L ++ E+ Q+ F+F++ Sbjct: 13 ILITGIAGFIGSYLARELLKTFEGIRLIGIDNMNDYYDVGLKEMRLAELQQNTAFTFIKG 72 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW-- 115 I D+ + ++P +VN AA++ V SI ++ +N++G F +LE R + Sbjct: 73 SIADKTVVDDIFSIYKPQIVVNLAAQAGVRYSITNPRAYVESNLMGFFNILEACRYSYDE 132 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + + S+ VYGS K + +ED NP S Y+ATK S++ + A+ Sbjct: 133 GCTGVE-----HLVYASSSSVYGSNKKVPYATEDKVDNPVSLYAATKKSNELMAHAYSKL 187 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP P+ +M++G + ++ G RD+ Y++D V + Sbjct: 188 YGIPSTGLRFFTVYGPAGRPDMAYFGFTNKMVKGQKIQIFNYGDMYRDFTYIDDIVTGVV 247 Query: 235 LVLKK-------GRIGERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELIRFIE 285 V++K G + YNIG N + V E + + +I + EL+ Sbjct: 248 NVMQKSPDFNEDGVKYKVYNIGNNQPESLMYFVETLEKCLMAEGIITLP-AEKELLPM-- 304 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D ++ + G+ P + GL K WY Sbjct: 305 -QPGDVYQTYADVDELVKDFGFKPSTGLAKGLEKFAKWY 342 >gi|260184709|ref|ZP_05762183.1| hypothetical protein MtubCP_01452 [Mycobacterium tuberculosis CPHL_A] gi|289445385|ref|ZP_06435129.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis CPHL_A] gi|289418343|gb|EFD15544.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis CPHL_A] Length = 326 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 33/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGF GS L L+ + V V+DK + + +++ + +F+ + Sbjct: 1 MEILVTGGAGFQGSHLTESLLANGH-WVTVLDK-SSRNAVRNMQGFRSHDRAAFISGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 59 DGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN---- 112 Query: 121 DKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG Sbjct: 113 ------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V + N +G + LIP + + I G + ++G G RD+LYV D V A Sbjct: 167 LDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAY 226 Query: 234 YLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LVL+ + + N + + DIV + A I + RPG + Sbjct: 227 NLVLRTPTLRVQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQ 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ D S KS IG+ PQ + G+++ + W D + Sbjct: 277 RFPADISLAKS-IGFQPQVEIWDGIDRYINWAKDQPQY 313 >gi|303247668|ref|ZP_07333938.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] gi|302490940|gb|EFL50837.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] Length = 332 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 152/336 (45%), Gaps = 35/336 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQV-- 57 R++VTG GFIGS L +LV Q + Y + NS + S ++ L V Sbjct: 3 RILVTGADGFIGSHLVEHLVR----QGHEVRAFVYYNSFNSWGWLDASPEDIRKDLDVFA 58 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWW 115 DI D IR+A+++ DA+++ AA + S D ++ TNI GT +L+ R L Sbjct: 59 GDIRDPHGIRAAMRDC--DAVLHLAALIAIPYSYHSPDTYVDTNIKGTLNVLQAARDLGL 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S + + ST EVYG+ +E+ P + SPYSATK +D L L++ ++ Sbjct: 117 S----------KVVHTSTSEVYGTAQFVPITEEHPLHGQSPYSATKIGADQLALSFHLSF 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 PV + N YGP +IP I+++ G+ G RD+ +V D RA Sbjct: 167 DTPVAILRPFNTYGPRQSARAVIPTIISQIASGARRIQLGALHPTRDFSFVTDTARAFEA 226 Query: 236 V-LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--R 292 V L +G+ N G E D I ++DA + + L RP Sbjct: 227 VLLSDAAVGQVLNAGSGFEVSIGDTAQMIASVMDASVEIGHDSQRL------RPAKSEVE 280 Query: 293 RYAIDSSKIKSEIGWFPQ----ENMESGLNKTVCWY 324 R D++++++ GW P + GL +TV W+ Sbjct: 281 RLLADNTRLRAVTGWAPAYGGLDGFRRGLVETVDWF 316 >gi|125973876|ref|YP_001037786.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|256004331|ref|ZP_05429313.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|125714101|gb|ABN52593.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|255991765|gb|EEU01865.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|316939926|gb|ADU73960.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 347 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 162/336 (48%), Gaps = 20/336 (5%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 + +TG AGFIG+ + L++ + I ++ ID + Y L + L+ + ++ F F++ Sbjct: 11 IFITGVAGFIGAYFAKQLLDTVDGITIIGIDNMNDYYDVKLKESRLESLCNNSKFIFVKG 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 +I D+E I + + P +VN AA++ V SI D +I +NIIG + +LE R + Sbjct: 71 NIADKELINNIFNTYHPQIVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACRHSY-- 128 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K + S+ VYGS K +S ED P S Y+ATK S++ + + Y Sbjct: 129 -DEGKVPVEHLVYASSSSVYGSNKKVPYSTEDKVDYPVSLYAATKKSNELMAYTYSKLYN 187 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ ++ +G + ++ G RD+ Y++D V+ + LV Sbjct: 188 IPSTGLRFFTVYGPAGRPDMAYFSFTNKLAQGKKIQIFNYGDMYRDFTYIDDIVKGIVLV 247 Query: 237 LKK----GRIGERYNIG--GNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRP 288 L+K G RY I GNN+ +N+ E+ L++ I EL+ +P Sbjct: 248 LQKVPEPMEDGVRYKIYNIGNNKPENLMHFVEVLEKCLMEEGIITKPGEKELLPM---QP 304 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D + + G+ P ++E GL+K WY Sbjct: 305 GDVYQTYADVDDLVRDFGFKPSTSLEEGLSKFAKWY 340 >gi|91201760|emb|CAJ74820.1| Similar to dTDP-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 28/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ + +V V+D L+ N K+ F +DIC Sbjct: 1 MKILVTGGAGFIGSNLVDQLIEEGH-RVAVVDDLSTGKEENIHKKAE------FYNIDIC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + K+ +P+ + + AA ++V +S+ NI+G+ L C Sbjct: 54 DAKSLEEVFKQIKPEIVNHHAAHANVRKSVETPVYDANINILGSLNL---------CQLS 104 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K +F+ ST VYG + +E P P S Y +K + ++ + + Y + V Sbjct: 105 NKYRVKKFIYASTGGAVYGEPKQLPANESTPPEPLSHYGVSKHTVEHYLHVFHKLYDLNV 164 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P ++ + M++ ++GDG RD++YV+D V+A V Sbjct: 165 TILRYPNVYGPRQSPHGEAGVVAIFSELMLQNKQPTIFGDGSKTRDYVYVDDIVKANIAV 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L GE YN+G E ++++ + L I + R G ++ Sbjct: 225 LGDIGNGEIYNLGWGKEISDMEVFLAVRRALRKDIEPILG--------QKRHGEVDHISL 276 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + EI W P+ E G+ K +Y Sbjct: 277 DHSKARREIKWSPEVTFEEGVKKATQYY 304 >gi|42523176|ref|NP_968556.1| UDP-glucose 4-epimerase [Bdellovibrio bacteriovorus HD100] gi|39575381|emb|CAE79549.1| probable UDP-glucose 4-epimerase [Bdellovibrio bacteriovorus HD100] Length = 327 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 150/333 (45%), Gaps = 35/333 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKE---ISQSNLFSFLQV 57 +++VTG GFIGS L LV++ ++ LV N NS + S + S ++V Sbjct: 4 KVLVTGADGFIGSHLTELLVSEGYSVRALV--------NYNSFNSWGWLDSSAVRSDIEV 55 Query: 58 ---DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DI D R K DAI + AA + S + ++ TN+ GT + Sbjct: 56 VSGDIRDPFLCRDITKGM--DAIFHLAALIAIPYSYVAPQSYVETNVTGTLNI------- 106 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + + + ST EVYG+ E P P SPYSA+K +SD + +++ ++ Sbjct: 107 --CKAALDNGVAKVVHTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIASDAMAMSFFNS 164 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 +G+P+ ++ N YGP +IP I ++ G GD RD+ YV D R L Sbjct: 165 FGLPLTIARPFNTYGPRQSARAVIPTIIAQIASGKKEISIGDMTPTRDFNYVTDTCRGFL 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L IG+ NIG N E D + I ++ + I Y + RP + Sbjct: 225 ALAANSNCIGKTVNIGSNYEISIKDTLELIKGIMGSNISIQYDSHRV------RPKNSEV 278 Query: 294 YAI--DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + D++ I S G+ P N+E GL TV W+ Sbjct: 279 HRLWCDNTLINSLTGFSPLVNIEQGLRMTVDWF 311 >gi|289579855|ref|YP_003478321.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] gi|289529408|gb|ADD03759.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] Length = 328 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 96/344 (27%), Positives = 148/344 (43%), Gaps = 30/344 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M + VTGGAGFIG L V V+D N+ +++ + + S Sbjct: 1 MDIFVTGGAGFIGGHLAESFAA-AGHDVTVLDNYEPYYDLGIKEHNVEAVEAAATDSDGS 59 Query: 54 FLQVD--ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 VD + D + + S Q D I + AA++ V +S+ D+ N+ GT +LE Sbjct: 60 CEIVDGSVTDADLLTSLTN--QTDVIYHQAAQAGVRKSVEEPDKVNEFNVTGTVNVLEAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R D R + S+ VYG + + E P P SPY +K S+++ + + Sbjct: 118 R---------TNDVDRVVYASSSSVYGKPEYLPYDEAHPNEPVSPYGVSKLSAEHYMRVY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+P + YGP P I ++R + G +YGDG+ RD+ Y+ D V Sbjct: 169 NEVYGLPTVSLRYFTVYGPRMRPNMAISNFVSRCMRGEPPVIYGDGEQTRDFTYIADVVD 228 Query: 232 ALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + +L GE NIG + NIDI + D + P + + E R G Sbjct: 229 ANHRLLTDDSADGEVMNIGSTD---NIDIETLAEVVRDEIDPDL-----PLEYTEARDGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D SK IG+ P ++ G+ + + WY N W+ PL Sbjct: 281 AEHTHADISKANELIGYEPSRDIREGVGEFIDWYETNREWYEPL 324 >gi|302540007|ref|ZP_07292349.1| NAD-dependent epimerase/dehydratase [Streptomyces hygroscopicus ATCC 53653] gi|302457625|gb|EFL20718.1| NAD-dependent epimerase/dehydratase [Streptomyces himastatinicus ATCC 53653] Length = 344 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 27/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV--- 57 + VTG GFIGS L LV +++ +V + + G L +L + ++ S ++V Sbjct: 18 VAVTGAEGFIGSHLVEALVATGQRVRAMVQYNSFSDFGWLETLPQ----DVLSEVEVVLG 73 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +K + A+ + AA + S ++ TN+ GT +LE R Sbjct: 74 DVRDPGSVTGLVKGAE--AVYHLAALIAIPYSYRAPHSYVDTNVTGTLNVLEAVR----- 126 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + ST E YG+ +ED P N SPY+A+KA D L ++ ++G Sbjct: 127 ----HLEIPRLVHTSTSETYGTAQTVPITEDHPINTQSPYAASKAGGDRLADSYHASFGT 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+ N +GP +IP I ++ G GD + RD+ YV+D A V Sbjct: 183 PVVTLRPFNTFGPRQSMRAVIPTVIGQVAAGERTVTLGDLRPTRDFTYVKDTAAAFLAVG 242 Query: 238 KKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +G +N G E D+V +G L+D + T+ +R + R Sbjct: 243 TAPAADVVGRTFNAGTGGEISVGDLVALVGKLMDTDL-DVCEDTQRVRPADS---EVMRL 298 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+S++++ GW P ++E GL T+ ++ D Sbjct: 299 VCDASRLRAATGWAPAHSLEEGLEHTIAFFRD 330 >gi|237719472|ref|ZP_04549953.1| nucleotide sugar epimerase [Bacteroides sp. 2_2_4] gi|229451332|gb|EEO57123.1| nucleotide sugar epimerase [Bacteroides sp. 2_2_4] Length = 355 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEI-SQSNLFSFLQ 56 ++VTG AGFIGS L L +D + I+V+ ID +T ++N LKEI S + F++ Sbjct: 13 VLVTGAAGFIGSNLVMRLFHDFRNIRVIGIDSITDYYDVNIKYERLKEIESLDRDWIFVR 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D++ + E + +VN AA++ V SI D ++ +N+IG + +LE R + Sbjct: 73 ASIADKDAVERIFSENKISVVVNLAAQAGVRYSITNPDAYVQSNLIGFYNILEACRHY-- 130 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 131 -------EVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTDKLVKGETIKIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 +++ R GE YNIG N+ +D V + + ++P+ Y +H Sbjct: 244 IIQHAPEKRNGEDGLPIPPYKVYNIGNNSPENLLDFVTILQEELICANILPQDYDFEAHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P ++ GL WY Sbjct: 304 ELVPM---QPGDVPITYADTTPLEQDFGFKPSTSLRDGLRAFAQWY 346 >gi|24637520|gb|AAN63789.1|AF454501_8 Eps11G [Streptococcus thermophilus] Length = 357 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 34/342 (9%) Query: 8 GAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVDICDR 62 AGFIGS L + + + V+ ID + ++ SL E+++ F+F++ +I D Sbjct: 24 AAGFIGSNLVKRIYQEAPSATVIGIDNMNAYYDVALKEFSLNELAKYPTFTFVKGNIADT 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I ++++P +VN AA++ V SI D ++ +N++ F +LE R C S + Sbjct: 84 ELITELFEKYKPSVVVNLAAQADVRYSITNPDAYVESNLVSFFNILEACR---HCESLE- 139 Query: 123 KDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y IP Sbjct: 140 ----HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTG 195 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG- 240 YGP P+ ++++G + ++ G RD+ YV+D V ++ V+KK Sbjct: 196 LRFFTVYGPAGRPDMTYFGFTNKLVKGETIKIFNYGNCKRDFTYVDDIVESVVRVMKKAL 255 Query: 241 --RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSY---SHTELIRFI 284 + GE YNIG N +D V + ++ ++P+ Y +H EL+ Sbjct: 256 DKKNGEDGLLIPPYAVYNIGNQNPENLLDFVQILSEELVIAKVLPEDYDFKAHKELVPM- 314 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG D+S ++ + G+ P ++ GL WY + Sbjct: 315 --QPGDVPVTYADTSALERDFGYKPSTSLRIGLRNFAEWYAE 354 >gi|304438197|ref|ZP_07398139.1| NAD-dependent epimerase/dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368804|gb|EFM22487.1| NAD-dependent epimerase/dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 335 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 97/335 (28%), Positives = 155/335 (46%), Gaps = 29/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKE--ISQSNLFSFLQ 56 +++VTG GFIGS L L+ N +K V + G L++L + +FS Sbjct: 6 KVLVTGADGFIGSHLAETLIRRGNSVKAFVQY-NSFNSCGWLDTLDADVVRAMEIFSG-- 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +++A++ DA+ + AA + S D +I TNI GT +++ R Sbjct: 63 -DVRDPHGVKTAMQGC--DAVYHLAALIAIPYSYHSPDTYIDTNIKGTLNIMQAARELGV 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +Q ST EVYG+ +E+ P + SPY+A+K +D L +++ +++G Sbjct: 120 A---------KVVQTSTSEVYGTAQFVPITEEHPLHGQSPYAASKIGADQLAMSFHYSFG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP +IP IT++ G G RD+ YVED V V Sbjct: 171 TPVAVIRPFNTYGPRQSARAVIPTIITQIANGRRNLHLGAVSPTRDFNYVEDTVDGFIAV 230 Query: 237 LKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ IGE NIG N E I I + + D + T+ R +R +A Sbjct: 231 GEQDASIGEVINIGSNFE---ISIEATVQLIADIMQADVTITTDEKRLRPTGSEVERLWA 287 Query: 296 IDSSKIKSEIGWFP----QENMESGLNKTVCWYLD 326 ++ K + +GW P ++ GL KTV W+ D Sbjct: 288 -ENRKARELLGWVPRYGGRDGFRRGLEKTVAWFTD 321 >gi|293569325|ref|ZP_06680623.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1071] gi|291588031|gb|EFF19881.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E1071] Length = 315 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 38/337 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L YL + KI +V+D L+ NL+ K++ +F++ D+ Sbjct: 4 ILITGGAGFIGSTLANYLGKENKI--VVVDDLSMGKKENLDMEKQV------TFIEGDVS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +K++Q I + AA + V S+ E N +LLE R + S L Sbjct: 56 DPQLMERIMKQYQFAYIFHLAAVASVADSVERPLETHRVNFDSALLLLELVRKYQSGLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 115 ------RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTS 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVR 231 N YGP P I+ ++ E + L+GDG RD++Y+ED ++ Sbjct: 169 AVRFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKTEFTLFGDGSQSRDFVYIEDVIQ 228 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 AL LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 229 ALLLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQILG---------TELALKYEAERSG 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D SKI+S +G+ P+ ++ +G+ + + +D Sbjct: 280 DIRDSLADISKIRS-LGYQPKFDILNGMERYLKTEID 315 >gi|160876223|ref|YP_001555539.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|160861745|gb|ABX50279.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|315268412|gb|ADT95265.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS678] Length = 326 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 155/337 (45%), Gaps = 39/337 (11%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAG---NLNSLKEISQSNLFSFLQ 56 +++VTG GFIGS L LV +++ L + Y G N++ L E+ + Sbjct: 3 KVLVTGADGFIGSHLVEMLVAQGYQVRALSQYNSFNYWGWLENIDCLDEVE------VIC 56 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + K+ D I + AA + S + D ++ TN GT + Sbjct: 57 GDIRDPHFCKHLCKDI--DVIYHLAALIAIPYSYIAPDSYLDTNAKGTLNI--------- 105 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + + + R + ST EVYG+ E P P SPYSA+K ++D + +++ +++ Sbjct: 106 CQAALENNVSRVIHTSTSEVYGTAKYVPIDEQHPLQPQSPYSASKMAADAMAMSFHNSFE 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 +P+ ++ N YGP +IP I+++ G+ GD RD+ YV D R + L Sbjct: 166 LPLTIARPFNTYGPRQSARAVIPTIISQIAAGATQIKLGDISPTRDFNYVLDTCRGFIAL 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHD 291 IGE NI N +EI I K H++ + FI D RP Sbjct: 226 AAHDNCIGETLNISSN---------YEISIEDTLNIIKQNMHSD-VEFITDDARLRPQQS 275 Query: 292 RRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + D+SKIK+ G+ PQ ++ GL +T+ W+ + Sbjct: 276 EVFRLWGDNSKIKTLTGYQPQFDIHIGLKETITWFTE 312 >gi|294674228|ref|YP_003574844.1| polysaccharide biosynthesis protein [Prevotella ruminicola 23] gi|294473017|gb|ADE82406.1| polysaccharide biosynthesis protein [Prevotella ruminicola 23] Length = 353 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 34/347 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLT--YAGNLNS--LKEIS-QSNLFS--- 53 ++VTG AGFIGS L L D+K +V ID + Y L LK+++ Q ++F Sbjct: 11 ILVTGAAGFIGSYLVHRLFKDVKGATIVGIDNMNDYYDVRLKEYRLKKLNVQCSMFHVQW 70 Query: 54 -FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F++ D+ D++ I ++ D +VN AA++ V SI D +I +NIIG + ++E Sbjct: 71 HFVRGDLADKDLIEKLFAQYNFDVVVNLAAQAGVRYSITNPDAYIQSNIIGFYNIIE--- 127 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 +C + + + S+ VYG K FS +D NP S Y+ATK S++ + + Sbjct: 128 ---ACRNHPVE---HLVYASSSSVYGGNKKVPFSTDDRVDNPVSLYAATKKSNELMAHCY 181 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ ++I+G + ++ G RD+ YV+D V Sbjct: 182 SKLYDIPTTGLRFFTVYGPAGRPDMAYFGFTNKLIKGETIQIFNYGNCRRDFTYVDDIVE 241 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSH 277 + V+ KKG G YNIGG K +D V + + ++PK + Sbjct: 242 GIVRVMQGAPERKKGEDGLPVPPYAVYNIGGGQPEKLLDFVNILQEELVRAGVLPKDFDF 301 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D++ ++ + G+ P+ ++ GL WY Sbjct: 302 EAHKQLVPMQPGDVPATFADATALERDFGFTPKISLREGLRDFSEWY 348 >gi|317483484|ref|ZP_07942471.1| NAD dependent epimerase/dehydratase [Bifidobacterium sp. 12_1_47BFAA] gi|316915065|gb|EFV36500.1| NAD dependent epimerase/dehydratase [Bifidobacterium sp. 12_1_47BFAA] Length = 354 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 35/345 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 ++VTG AGFIGS L + L++ ++ I V+ D + Y L L ++S F+F++ Sbjct: 12 VLVTGAAGFIGSNLAKQLLDSIEGIHVIGFDNVNDYYDVRLKEYRLNQLSHYEGFTFIKA 71 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D++ + ++++P +VN AA++ V SI D +I +N+IG + +LE R Sbjct: 72 DLADKDAVNDVFEQYRPTVVVNLAAQAGVRYSITHPDAYIQSNLIGFYNILEACR----- 126 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D + S+ VYGS K +S +D NP S Y+ATK S + L A+ Y Sbjct: 127 --HHPVDHLVY--ASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSDELLAHAYSKLYD 182 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ ++ G + ++ G RD+ YV+D V + V Sbjct: 183 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLRAGETIKIFNYGNCRRDFTYVDDIVEGILRV 242 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHTE 279 ++ + GE YNIG + ++ V + L ++P Y SH E Sbjct: 243 MQGAPSKQTGEDGLPVPPYAVYNIGNGHPENLLEFVTILQEELLRAKVLPADYDFESHKE 302 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D++ ++ + G+ P + GL + WY Sbjct: 303 LVPM---QPGDVPVTYADTAALERDFGYKPSTPLCEGLRRFAEWY 344 >gi|329940676|ref|ZP_08289957.1| nucleotide-sugar dehydratase [Streptomyces griseoaurantiacus M045] gi|329300737|gb|EGG44634.1| nucleotide-sugar dehydratase [Streptomyces griseoaurantiacus M045] Length = 322 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 33/332 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D +V+ +D L G+ ++ Q + F F++ D+ D Sbjct: 8 RALVTGGAGFVGSHLCERLL-DQGAEVVCLDNLA-TGSRGNVAAFEQRSGFRFVRGDVTD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +RS F D +++FA + + E + GT LE R Sbjct: 66 PAAVRSLPGAF--DLVLHFACPASPVDYLRLPLETLEVGSAGTRNALERAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 +D RFL ST EVYG + +E P P S Y +K ++ LV A +G Sbjct: 115 -RDGARFLLASTSEVYGDPLEHPQTETYWGNVNPIGPRSVYDESKRFAEALVTAHRQVHG 173 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + N YGP + +P I + ++G + + GDG R YV+D V L Sbjct: 174 TDTAIVRIFNTYGPRMRTGDGRAVPTFIAQALDGMPLTVAGDGGQTRSLCYVDDTVDGVL 233 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L G G NIGG++E +++ + L + + IRF+E RP D Sbjct: 234 ALAGAAGETGP-VNIGGSDEITMLELARRVVELTGS--------SSRIRFVE-RPVDDPA 283 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+S+ + +GW P+ + +GL +T+ W+ Sbjct: 284 RRRPDTSRAREVLGWEPRTSWTAGLERTIGWF 315 >gi|148266093|ref|YP_001232799.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146399593|gb|ABQ28226.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 336 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 27/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVI-DKLTYAGNLNSLK-EISQS-NLFSFLQV 57 ++++TG GFIGS L LV D ++ V+ + G L+ ++ EI +S ++FS Sbjct: 7 KILITGADGFIGSHLTEELVRRDCAVRPFVLYNSFNSWGWLDHMEPEILKSLDIFSG--- 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D +R A+K D +++ AA + S D ++ TN+ GT +++ R Sbjct: 64 DIRDPHGVRQAMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNIVQAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + ST EVYG+ +E+ P SPYSA+K +D + +++ ++ Sbjct: 117 ----ELEVEKVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFHTSFDT 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + N YGP +IP IT++ G G RD+ YV D VR Sbjct: 173 PVAVIRPFNTYGPRQSARAVIPTIITQLANGCRTLKLGALHPTRDFNYVADTVRGFIAAA 232 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + R +GE NIG N E I I + + + + + T+ +R D+ +R +A Sbjct: 233 EGDRAVGEVINIGSNYE---ISIGETARMIAEIMGMELETETDRVRLRPDKSEVERLWA- 288 Query: 297 DSSKIKSEIGWFP----QENMESGLNKTVCWY 324 D++K K +GW P +E + GL +T+ W+ Sbjct: 289 DNAKAKELLGWEPLYAGKEGLRRGLEETMRWF 320 >gi|325002124|ref|ZP_08123236.1| NAD-dependent epimerase/dehydratase [Pseudonocardia sp. P1] Length = 315 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 92/335 (27%), Positives = 147/335 (43%), Gaps = 35/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+ +VLV+D +L+S K + + + ++DI Sbjct: 1 MRALVTGGAGFIGSTLVDTLLARGD-EVLVVD------DLSSGKRENLAPGVALTELDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + EF P+A+ + AA+ V S+ + N++GT +L+ R Sbjct: 54 DTDGFAKCAAEFAPEAVYHLAAQIDVRTSMADPVHDASVNVLGTLSVLQAAR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + + + +YG +ED P P SPY +K +++ + +G+P L Sbjct: 106 DTGARGVVVCSTGGAIYGDGAPLPTTEDEPAEPESPYGMSKLAAERYTRFFVRAHGLPAL 165 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 + +N YGP P ++ L R G ++GDG RD+L+V D RA Sbjct: 166 VLRFANVYGPRQHPAGGAGVVSLFCDRARSGRRPTVFGDGGQTRDFLFVGDVARAATASA 225 Query: 237 --LKKGRI-GERYNIGGNNERKNIDIVFEIGFLL----DALIPKSYSHTELIRFIEDRPG 289 L G + GE +N+G E ++ IG + A P+ RPG Sbjct: 226 DRLAAGELAGEVFNVGTGTESTVTELAATIGRIAGIDEGAFTPEHEPA---------RPG 276 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR +D S+ + +G + GL T W+ Sbjct: 277 ELRRSCLDPSRGIAALGLPAPTTLADGLAATWAWH 311 >gi|298384678|ref|ZP_06994238.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 1_1_14] gi|298262957|gb|EFI05821.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 1_1_14] Length = 352 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 30/343 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEISQ-SNLFSFLQ 56 ++VTG AGFIG+ L + L+N+ ++V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFIGANLVKRLLNEFNSVKVIGIDSITEYYDVRLKYERLQELSAYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I +E + S + P +VN AA++ V SI D +I +N+IG + +LE R Sbjct: 73 DSIAKKEIVESIFTNYHPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILEACR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 129 -----HHSVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 I YGP P+ ++++G + ++ G RD+ Y++D V + Sbjct: 184 NISSTGLRFFTVYGPCGRPDMAYFSFANKLLKGETIQIFNYGNCKRDFTYIDDVVEGMVR 243 Query: 236 VLK---KGRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELI 281 +++ + R GE YNIG N+ D V + + ++P Y+ + Sbjct: 244 IIQHTPEKRNGEDGLPVPPYKVYNIGNNSPENLFDFVTILQEELIAAKVLPSDYNFNKHK 303 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ ++ + G+ P +++ GL + V WY Sbjct: 304 ELVAMQPGDVPVTFADTRPLEDDFGFKPGTSLQIGLRRFVEWY 346 >gi|311070170|ref|YP_003975093.1| NAD-dependent epimerase/dehydratase [Bacillus atrophaeus 1942] gi|310870687|gb|ADP34162.1| NAD-dependent epimerase/dehydratase [Bacillus atrophaeus 1942] Length = 314 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 105/341 (30%), Positives = 163/341 (47%), Gaps = 42/341 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF-SFLQVDI 59 M ++VTGGAGFIG + + L+ D + QV V+D L+ G L +++E+ F F+ DI Sbjct: 1 MNVLVTGGAGFIGRWVVKKLLED-RHQVWVLDDLS-NGRLENIEELKNDPGFIEFINGDI 58 Query: 60 CDRECIRSA-LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + LK+F D + A +V SI + IGTF +LE C Sbjct: 59 KDAKTLEDLFLKKF--DICYHLGASINVQDSIDDPKTTFENDTIGTFNILE------LC- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM----PYNPSSPYSATKASSDYLVLAWGHT 174 KK + + +ST VY D+ F+E + P P+SPY+ +K +++ +VL++ H Sbjct: 110 ---KKHNVKVVFMSTCMVY---DRAAFAEGIKETDPIKPASPYAGSKIAAENMVLSYYHA 163 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+P ++ N YGPY +I + I ++G + +YGDG RD LYVED Sbjct: 164 YGLPAVVIRPFNTYGPYQKTGGEGGVIAIFIKNKLDGKKLHIYGDGTQTRDLLYVED--- 220 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL-LDALIP---KSYSHTELIRFIEDR 287 + V++ G Y+ N E N + +I L LI + H E I + Sbjct: 221 CAHFVVQAG-----YSQKANGEIINAGLGRDISINDLAELIAGDKQKIHHVEHIHPQSEI 275 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 P + + K K + W PQ ++E G+ KT W N Sbjct: 276 P----KLLCNYEKAKKILNWSPQVSLEEGIRKTEEWIKSTN 312 >gi|319785116|ref|YP_004144592.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171004|gb|ADV14542.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 357 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 100/347 (28%), Positives = 158/347 (45%), Gaps = 43/347 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDIC 60 + + GG+GFIGS L L++D + VLVID L+ G +L+ ++Q ++ + +D+ Sbjct: 11 VAIVGGSGFIGSNLADSLLSDGE-PVLVIDNLSRPGVQQNLEWLAQKHASRLTVETIDVR 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + AL + AI + AA++ V S++ E N+ GTF +LE RL Sbjct: 70 DANALAPALTGSK--AIFHLAAQTAVTTSLVQPREDFDINLRGTFNVLEAARL------- 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPS------------------SPYSATK 161 ++ + ST++VYGSL ED Y P +PY +K Sbjct: 121 -SGERIPVVFASTNKVYGSLPDVAVREDGDRYVPCDSVIQANGIDEARGLDFCTPYGCSK 179 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQ 218 ++D VL + +YG+P + S YGP F + + + + G + +YGDG+ Sbjct: 180 GAADQYVLDYAKSYGMPTAVLRMSCIYGPRQFGTEDQGWVAHFLLSALTGRPITIYGDGR 239 Query: 219 NVRDWLYVEDHVRALYLVLKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD L+V D V A VL + G+ +N+GG E + LL I Sbjct: 240 QVRDILHVSDAVAAYRAVLDRIETTKGQAFNLGGGPEN-----ALSLRTLLSE-IRGLTG 293 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 H IR +R G + D+ KIK+ +GW Q + G+ W Sbjct: 294 HELSIRHDGERTGDQPFFVADTRKIKTALGWMAQVSWREGVRDLADW 340 >gi|168702107|ref|ZP_02734384.1| NAD-dependent epimerase/dehydratase [Gemmata obscuriglobus UQM 2246] Length = 328 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 152/323 (47%), Gaps = 17/323 (5%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG G +G + R L L+ Q V+ + + + S ++ D+CD+ Sbjct: 11 LVTGATGLVGGWVVRRL---LRAQADVVCLVRDWAPDSEFERSGLSKQVKSVRGDVCDQA 67 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + E++ D +++ AA++ V + +N+ GT+ LLE +C K Sbjct: 68 LLERVCGEYEIDTVIHLAAQTLVPVANRNPVATFESNVQGTWALLE------ACRRSPKV 121 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 Q + S+D+ YG +K + E P PY +K+ +D + ++ TY +PV ++ Sbjct: 122 RQI--VLASSDKAYGDAEKLPYDEGTPLQGRHPYDVSKSCADLIAQSYATTYNLPVAITR 179 Query: 184 CSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 C N YGP +++P I ++ G + DG ++RD+ YVED A YL+L + ++ Sbjct: 180 CGNFYGPGDLNWNRIVPGTIRSVMRGERPVIRSDGTHIRDYFYVEDGA-AAYLMLAE-KL 237 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY-AIDSSKI 301 + G E N ++ L + T L + + H+ ++ ++ ++K Sbjct: 238 AADPTLRG--EAFNFSNETQVTVLDLVRLLLDQMGTRLTPDVRNEASHEIKHQSLSAAKA 295 Query: 302 KSEIGWFPQENMESGLNKTVCWY 324 ++ +GW P +E GL++TV WY Sbjct: 296 RARLGWEPLFTLEEGLSRTVPWY 318 >gi|153001486|ref|YP_001367167.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] gi|151366104|gb|ABS09104.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] Length = 326 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 155/337 (45%), Gaps = 39/337 (11%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAG---NLNSLKEISQSNLFSFLQ 56 +++VTG GFIGS L LV +++ L + Y G N++ L E+ + Sbjct: 3 KVLVTGADGFIGSHLVEMLVAQGYQVRALSQYNSFNYWGWLENIDCLDEVE------VIC 56 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + K+ D I + AA + S + D ++ TN GT + Sbjct: 57 GDIRDPHFCKHLCKDI--DVIYHLAALIAIPYSYIAPDSYLDTNAKGTLNI--------- 105 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + + + R + ST EVYG+ E P P SPYSA+K ++D + +++ +++ Sbjct: 106 CQAALENNVSRVIHTSTSEVYGTAKYVPIDEQHPLQPQSPYSASKLAADAMAMSFHNSFE 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 +P+ ++ N YGP +IP I+++ G+ GD RD+ YV D R + L Sbjct: 166 LPLTIARPFNTYGPRQSARAVIPTIISQIAAGATQIKLGDISPTRDFNYVLDTCRGFIAL 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHD 291 IGE NI N +EI I K H++ + FI D RP Sbjct: 226 AAHDNCIGETLNISSN---------YEISIEDTLNIIKQNMHSD-VEFITDDARLRPQQS 275 Query: 292 RRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + D+SKIK+ G+ PQ ++ GL +T+ W+ + Sbjct: 276 EVFRLWGDNSKIKTLTGYQPQFDIHIGLKETITWFTE 312 >gi|123968985|ref|YP_001009843.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. AS9601] gi|123199095|gb|ABM70736.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. AS9601] Length = 332 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 34/337 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK--------LTYAGNLNSLKEISQSNLFS 53 + +V G F GS L+ DL I+VL + + L Y N L N F Sbjct: 4 KFLVIGSNSFSGSHFVSDLI-DLDIKVLGVSRSLEPKDVFLPYKWNKKYL------NNFQ 56 Query: 54 FLQVDIC-DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F ++++ D + ++EF+P IVNFA++ V S ++ TN+I L +E R Sbjct: 57 FNKINLNEDLNELLKLIEEFEPTHIVNFASQGMVAESWDNPIDWYKTNVISQVALHDELR 116 Query: 113 LWWSCLSQDKKDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K +F +++ ++T EVYG G E+ ++PS+PY+ ++A+ D +++ Sbjct: 117 ----------KLKFLKKYVHVTTPEVYGDTGSGWIKENFNFSPSTPYAVSRAACDLHLMS 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y PV+ + +N YGP ++IP I + L+G G + R +++++D Sbjct: 167 FFKAYSFPVIFTRAANVYGPGQQLYRIIPRTILSAKCHKKMNLHGGGLSERSFIFIKDVT 226 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + G +++ ++ +I + E F + P S L+ +DR G Sbjct: 227 EATLKLALNAEPGTSWHL-STKKKISIKNLVEKIFDIAGKNPNS-----LVNNTQDRLGK 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D+ Y ++SSKI+ W + +++SGL T+ W +N Sbjct: 281 DQNYLLESSKIRDAFNWEDKVDLDSGLKITMEWIQEN 317 >gi|313672373|ref|YP_004050484.1| nad-dependent epimerase/dehydratase [Calditerrivibrio nitroreducens DSM 19672] gi|312939129|gb|ADR18321.1| NAD-dependent epimerase/dehydratase [Calditerrivibrio nitroreducens DSM 19672] Length = 323 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 102/346 (29%), Positives = 158/346 (45%), Gaps = 53/346 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M +++TG AGFIGS + L++ L V+ +D L Y L + L +++ F F + Sbjct: 1 MYILLTGAAGFIGSWTAKKLLS-LGYNVVGVDNLNDYYDVRLKQHRLDILNEQKGFHFHR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI + + ++ DA++N AA + V SI + TN GT LLE Sbjct: 60 LDIENFGALEVLFDMYKFDAVINLAARAGVRYSIENPFVYYNTNTNGTVNLLE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + K D +F+ ST +Y + F+ED P N P SPY+A+K ++ + + + Sbjct: 113 LCKKHKVD--KFVLASTSSLYAGQEMP-FTEDKPVNTPISPYAASKKGAEVSCYTYHYLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI V + YGP P+ I I ++ G + +YGDG RD+ YVED Sbjct: 170 GIDVTVVRYFTVYGPAGRPDMSIFRFIKQIDAGEPIIIYGDGSQSRDFTYVEDIAEGTVR 229 Query: 236 VLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LKK +G E N+G NN K +E IR+IED G Y Sbjct: 230 ALKK--VGYEIINLGNNNPNK---------------------LSEAIRYIEDYIGKKAVY 266 Query: 295 A-------------IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + K K+ +GW P+ +++ G+ +T+ WY DN Sbjct: 267 EYRPFHKADMLATWANIEKAKNMLGWTPKVDLKEGIKRTIDWYKDN 312 >gi|257052157|ref|YP_003129990.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690920|gb|ACV11257.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 327 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 32/348 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-------TYAGNLNSLKEISQSN--L 51 M ++VTGGAGFIG L V D V+V+D L N++ +E +++ Sbjct: 1 MHILVTGGAGFIGGHLAEQFVTDGH-DVVVLDNLDPFYDLDIKRHNIDIAREAAEAGDGS 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ D+ D + + + + D + + AA++ V S+ ++ N+ GT LL+ Sbjct: 60 YEFIEGDVRDADLVTELVTD--ADYVYHQAAQAGVRPSVEDPRKYDEVNVDGTLNLLDAC 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R RF+ S+ VYG + E P P SPY A+K +++ +A+ Sbjct: 118 R---------DTGIERFVMASSSSVYGIPRSLPYEETHPTTPVSPYGASKLAAERYAMAY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y + + YGP P I ++R + G +YGDG RD+ Y++D V Sbjct: 169 SQVYDLSAVALRYFTVYGPRMRPNMAISNFVSRCMNGEPPIVYGDGTQTRDFTYIDDVVD 228 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + L+ G+ NIG + NI+I + D L P+ EL+ E+R Sbjct: 229 ANISLLDTDAADGQVLNIGSTD---NIEIRTLAEEIRDQLAPER----ELV--YEERHDA 279 Query: 291 DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D + D ++ + +G+ P + G+ + V WY DN W+ L ++ Sbjct: 280 DAEHTHSDITRARELLGYEPSHTIREGVEEFVGWYQDNRGWYESLVRK 327 >gi|89073301|ref|ZP_01159831.1| dTDP-D-glucose-4,6-dehydratase [Photobacterium sp. SKA34] gi|89051011|gb|EAR56475.1| dTDP-D-glucose-4,6-dehydratase [Photobacterium sp. SKA34] Length = 112 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/116 (50%), Positives = 78/116 (67%), Gaps = 14/116 (12%) Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +GQ VRD L V+DH + GE YNIGGNNE+ NI +V I +L++L+P Sbjct: 5 NGQQVRDGLQVDDHAKT----------GETYNIGGNNEQTNIAVVHAICDVLESLVPNKS 54 Query: 276 ----SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ +LI +++DRPGHD+RYAIDS+KI+ E+GW PQE+ E GL KTV WYL N Sbjct: 55 QGVKTYRDLITYVDDRPGHDKRYAIDSAKIEQELGWKPQESFEFGLRKTVEWYLAN 110 >gi|317121557|ref|YP_004101560.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] gi|315591537|gb|ADU50833.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] Length = 322 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 38/337 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----------LKIQVLVIDKLTYAGNLNSLKEISQS 49 MR++VTG AGFIGS + L+ +++ ID + AG + + +++ Sbjct: 1 MRVLVTGAAGFIGSHVVERLLKTGNGNTPGMEGLPSCEIVAIDDFS-AGQVRKIGDLAVE 59 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 L D+ + + + ++F P+A+++ AA+ V+RS+ D + N+ GT +L Sbjct: 60 RL------DVTEAAAVAAVFRDFGPEAVIHLAAQVSVERSLERPDRDVEVNVYGTLNVLR 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + + ++ F S+ VYG+ + E+ P P S Y +K ++++L+ Sbjct: 114 A-----AVAAGARRVVF----ASSAAVYGNPQRLPVDEEHPLEPLSVYGRSKLTAEWLIQ 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 + G+ ++ N YGP PE ++ + G ++GDG+ RD++YV Sbjct: 165 QYARGTGLEAVILRLGNVYGPGQRPETGPVVARFFVDALRGEGPLIHGDGRQTRDFVYVT 224 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 D RA L L G G NI G D+ I L++ R+ R Sbjct: 225 DVARAFALAL-VGPAGVVANISGGTATAIADLAERIHQLVEG--------APAPRYGPPR 275 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG R +D+ + + +GW P+ +++ GL T WY Sbjct: 276 PGDIRHSVLDNRRARELMGWAPRVSLDEGLKATYRWY 312 >gi|256545810|ref|ZP_05473166.1| UDP-glucuronate 5'-epimerase [Anaerococcus vaginalis ATCC 51170] gi|256398506|gb|EEU12127.1| UDP-glucuronate 5'-epimerase [Anaerococcus vaginalis ATCC 51170] Length = 361 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 29/348 (8%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 + VTG AGFIGS L L I ++ ID + ++N L+EI + ++ Sbjct: 11 VFVTGSAGFIGSNLVLELLKTQSPINIIGIDNMNDYYDVNIKKWRLEEIEKCLKENPNSS 70 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F Q DI ++E I +E +PD +VN A++ V SI D +I++N+IG + +LE Sbjct: 71 YKFYQEDISNKEIIDKIFEEHKPDVVVNLGAQAGVRYSISNPDAYISSNMIGFYNILEAC 130 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + S+ + + S+ VYGS K +S +D NP S Y+ATK S++ + A Sbjct: 131 RHSYDNGSKGVE---HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHA 187 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ +++ + ++ G RD+ Y++D V Sbjct: 188 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLNDQTIEIFNYGNCKRDFTYIDDIV 247 Query: 231 RALYLVLKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 + V++K + GE YNIG NN +D V + + ++P+ Y Sbjct: 248 EGVKRVIQKAPERKNGEDGLPIPPYKVYNIGNNNPENLLDFVTILQEELIRAKVLPEDYD 307 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + G D+ ++ + G+ P ++ G+ K WY Sbjct: 308 FESHKKLVPMQAGDVPITYADTKPLEKDFGFKPDTSLRDGIRKFAEWY 355 >gi|254383462|ref|ZP_04998813.1| UDP-glucose 4-epimerase [Streptomyces sp. Mg1] gi|194342358|gb|EDX23324.1| UDP-glucose 4-epimerase [Streptomyces sp. Mg1] Length = 333 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 31/332 (9%) Query: 5 VTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTG GFIGS L LV +++ + + + G L +L + L D+ D Sbjct: 9 VTGAEGFIGSHLTEALVARGHRVRAMAQYNSFSSYGWLETLAPDVLDQVEIVLG-DVRDP 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R L+ + + + AA + S ++ TN+ GT +LE R + Sbjct: 68 GSVRGLLEGAE--SAYHLAALIAIPYSYRAPHSYVDTNVTGTLNVLEAVRALGTP----- 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ST E YG+ +ED P N SPY+A+KA D L ++ ++G PV+ Sbjct: 121 ----RLVHTSTSETYGTAQTVPITEDHPINTQSPYAASKAGGDRLADSYHASFGTPVVTL 176 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR- 241 N +GP +IP I ++ G V GD + RD+ YV+D RA L G Sbjct: 177 RPFNTFGPRQSMRAVIPTVIGQVAAGERVITLGDLRPTRDFSYVKDTARAF---LAAGTA 233 Query: 242 -----IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RY 294 +G +N G E D+V IG ++DA I L RP R Sbjct: 234 PAEQVVGRTFNSGTGGEISVGDLVQLIGKVMDAPIEVREDSERL------RPAASEVMRL 287 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+S++ + GW P +E GL TV ++ D Sbjct: 288 VADASRLTAATGWQPAHTLEQGLAHTVEFFRD 319 >gi|29826897|ref|NP_821531.1| UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] gi|29603994|dbj|BAC68066.1| putative UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] Length = 335 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 21/329 (6%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + VTG GFIGS L L+ + +++ + + + G L +L + ++ L D+ Sbjct: 9 VAVTGAEGFIGSHLVEALIASGHRVRAMAQYNSFSSYGWLETLPQDVMDSVEVVLG-DVR 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ L +A+ + AA + S ++ TN+ GT +LE R Sbjct: 68 DAGSVQHLLT--GTEAVYHLAALIAIPYSYQAPHSYVATNVTGTLNVLEAVR-------- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST E YG+ +ED P N SPYSA+KA D L + ++GIPV Sbjct: 118 -RLGIPRMVHTSTSETYGTAQTVPITEDHPINTQSPYSASKAGGDRLADGYYASFGIPVA 176 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV---L 237 N +GP +IP I ++ G GD + RD+++V+D +A V Sbjct: 177 TLRPFNTFGPRQSMRAVIPTVIGQVAAGERTIALGDLRPTRDFMFVKDTAQAFLAVGTAP 236 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +G +N G E D+V +G L+ A + E + I R D Sbjct: 237 AEAVVGRTFNAGTGGEISVGDLVTLVGKLMGAELEVR----EDAQRIRPAASEVMRLVCD 292 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +S++++ GW P +++ GL +TV ++ D Sbjct: 293 ASRLRAATGWEPAHSLQEGLEQTVRFFSD 321 >gi|154252370|ref|YP_001413194.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans DS-1] gi|154156320|gb|ABS63537.1| NAD-dependent epimerase/dehydratase [Parvibaculum lavamentivorans DS-1] Length = 323 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/337 (28%), Positives = 160/337 (47%), Gaps = 33/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIGS LC YL+ D +V+ +D L Y L + L+ ++ N FSF++ Sbjct: 1 MTILVTGAAGFIGSYLCHYLL-DRGDEVVGVDDLNDYYDPALKAARLERLTGRNGFSFVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D++ + A+ + + + AA++ V S+ ++ +N+ G +LE R + Sbjct: 60 ADISDKDALAEAVSGRRIAKVAHLAAQAGVRYSLENPRAYVRSNLTGHLEILELCRGLGT 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG +K FSE P + P S Y+ATK + + + A+ H Y Sbjct: 120 VE--------HLVYASSSSVYGGNEKVPFSEADPVDHPVSLYAATKKADELMSHAYAHLY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI YGP+ P+ + M++G + ++ DG RD+ Y++D + Sbjct: 172 GIKQTGLRFFTVYGPWGRPDMAYWIFTEAMLKGKPIRVFNDGDMWRDFTYIDDIISGTVA 231 Query: 236 VLKKGRIGER-----YNIGGNN-ER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 L G+ YNIG N ER + IDI+ E+ L K+ E + + Sbjct: 232 ALDHAPAGKGAPHRIYNIGHNKPERLGRFIDILEEV------LGVKAVRQYEPM-----Q 280 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG R D + I+ ++G+ P+ + GL WY Sbjct: 281 PGDVPRTFADITAIERDLGFSPKTGLREGLAAFADWY 317 >gi|298387402|ref|ZP_06996955.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 1_1_14] gi|298260071|gb|EFI02942.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 1_1_14] Length = 354 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 36/346 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNL----NSLKEISQ-SNLFSFLQ 56 ++VTG AGF+G+ L + L+N+ ++V+ ID +T ++ L+E+S + F F++ Sbjct: 13 VLVTGAAGFVGANLVKRLLNEFDSVKVIGIDSITEYYDVRLKYERLQELSAYGDRFVFIK 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I + + S + P +VN AA++ V SI D +I +N+IG + +LE R + Sbjct: 73 DSIAKKGVVDSIFTDHHPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILEACRHYSV 132 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 133 E---------HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++ EG + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPCGRPDMAYFGFTNQLREGKTIRIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKGRIGER------------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 +++ + YNIG N+ +D V + + ++P Y +H Sbjct: 244 IMRHAPEKQNGDDGLPIPPYKVYNIGNNSPENLLDFVTILQEELIAAKVLPDDYDFETHK 303 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 EL+ +PG D++ ++ + G+ P ++ GL K WY Sbjct: 304 ELVPM---QPGDVPVTYADTTPLEQDFGFKPSTSLREGLRKFAGWY 346 >gi|300781371|ref|ZP_07091225.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] gi|300533078|gb|EFK54139.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] Length = 309 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 27/325 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L LV +V V+D L+ L+ IS ++ D+ Sbjct: 1 MRTLVTGGAGFIGSHLVDQLVM-AGHEVAVLDNLSS----GRLENISHQTAVELVEGDVG 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + + P+ I + AA+ V +S+ NI+GT + E R Sbjct: 56 DK-GLADVVDKLAPEVIFHLAAQIDVRKSVEDPILDAQANILGTINVAEAAR-------- 106 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + S+ +YG+ + E P +P SPY+A+K + + + + H YG+ Sbjct: 107 -KAGVRKIVHTSSGGSIYGTPSEFPVDESFPVDPHSPYAASKLAGEQYLGIYRHLYGMQA 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++G G N RD++YV D RA L Sbjct: 166 SFIAPANVYGPRQNPHGEAGVVAIFSENLLHGRPTKIFGGGTNTRDYVYVGDVARAFVLA 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G R+NIG + E + + L L+ K + + R G R A+ Sbjct: 226 AGERGDGVRFNIGTSVETTDRE--------LHTLVAKHAGAPDAPQNFPPRLGDVPRSAL 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTV 321 +++ K +GW P +++ G+ +TV Sbjct: 278 SAARAKEILGWEPTVSLDEGVARTV 302 >gi|167947469|ref|ZP_02534543.1| NAD-dependent epimerase/dehydratase [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589222|gb|ABG77120.1| NAD-dependent epimerase/dehydratase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 332 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 99/332 (29%), Positives = 148/332 (44%), Gaps = 27/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVI---DKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L L+ DL V + G L+SL Q L F D Sbjct: 7 KVLVTGADGFIGSHLTETLM-DLGCDVRAFVYYNSFNSWGWLDSLPREKQQQLDIFAG-D 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + +A++ D + + AA + S D ++ TNI GT +L+ R Sbjct: 65 IRDPNGVETAMQGV--DVVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + L ST EVYG+ E+ PY SPYSATK +D L ++ ++ +P Sbjct: 117 ---KLGTEKVLVTSTSEVYGTAQYVPIDENHPYQGQSPYSATKIGADRLAESFYRSFDLP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT+++ G+ G RD+ +V+D + K Sbjct: 174 VTIVRPFNTYGPRQSARAVIPTIITQLLNGAEEIKLGSLSPTRDFNFVKDSAMGFVEIAK 233 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHD--RRY 294 IGE N+ E IG L +I + ++I E RPG R Sbjct: 234 SDNVIGEEINLATGVE-------VSIGKLAKTMIELINPNAQIITDDERIRPGKSEVERL 286 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + K+KS W P+ ++ +GL +TV W+ D Sbjct: 287 LGSADKVKSLTEWEPKYDLRAGLAETVEWFRD 318 >gi|196232435|ref|ZP_03131288.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] gi|196223507|gb|EDY18024.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] Length = 301 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 51/336 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLTYAGNLNSLKEISQ--SNLFSFLQV 57 MRL+VTGG GF+GS RY++ +++ +D LT G L S++ +++ + + FL+ Sbjct: 1 MRLLVTGGCGFVGSNFVRYVLQHYGPEMVTNVDSLT-TGGLASIEGVAEEFGDRYEFLRA 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + I + L Q A+VNF + GT LLE R Sbjct: 60 DVSDADRIDTVLTTHQYFAVVNFTGGA-------------AHGAAGTATLLERAR----- 101 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RFLQ+S D + G +A++D L L H + Sbjct: 102 ----THGVRRFLQVSNDGALPLVSTG--------------QGNQAATDALALEAFHAHEQ 143 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V+++ + NYGP+ P + IP +I + + L+GDG +R WL+V+DH A++ L Sbjct: 144 EVIITRAACNYGPFQAPAEFIPSSIIHALRDEPLPLFGDGSKMRGWLHVDDHCSAIFAAL 203 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI- 296 G G Y + NE K D+ + A++ +LI+ + D R + Sbjct: 204 LGGEPGTIYPL--VNEEKASDLE-----VAQAILEHLGKSRDLIQ--ANAITRDPRMTVN 254 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D ++ W P+ + L +T+ WY+ N WW Sbjct: 255 DDEHLALKQLDWKPRRHFGPALRETIDWYVHNREWW 290 >gi|38174848|emb|CAD89771.1| hypothetical protein [Melittangium lichenicola] Length = 320 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 29/334 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIG +C L+ V+ +D L +G++ +LK S L F F Sbjct: 1 MKVLVTGAAGFIGYHVCERLLARGDT-VIGVDNLDTSGDV-TLKATRLSRLRAAPNFGFH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + R +P+ +V+ AA V + E+ TN+ G +LE R Sbjct: 59 RMDIRDAKACRELFDGARPERVVHLAARVGVRTLDSESPEYAETNVTGFLQVLELCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + + + F S+ VYG+ FSED + P S Y+ATK +++ + A+ H Sbjct: 116 ----RSRVEHLVF--ASSSSVYGAGSDMPFSEDSAADRPLSLYAATKRANEMMAHAYSHQ 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P+ + YGP+ P+ + + M+EG + L+G+G+ RD+ Y++D V AL Sbjct: 170 YAMPITGLRLFSVYGPWGRPDMAPMMFLRAMLEGRSLELHGEGKAQRDFTYIDDVVEALV 229 Query: 235 LVLKKGRIG----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 VL G N+G + L+D L+ + T + R Sbjct: 230 RVLDAAPTGLPLYRVLNVGRGTP-------VSMSRLVD-LLEEHLGTTAWVEMRSSRSEE 281 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++ E G+ P +E GL + V WY Sbjct: 282 MDATCADVTALERETGFRPSVTLEQGLARLVAWY 315 >gi|78485803|ref|YP_391728.1| NAD-dependent epimerase/dehydratase [Thiomicrospira crunogena XCL-2] gi|78364089|gb|ABB42054.1| NAD-dependent epimerase/dehydratase family protein [Thiomicrospira crunogena XCL-2] Length = 333 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 39/339 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV--- 57 +++VTG GFIGS L LV K++ L + + NS + QS ++V Sbjct: 10 QVLVTGADGFIGSHLTEQLVKAGAKVRALAL-----YNSFNSWGWLDQSPYLDEIEVVSG 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++ + + AA + S + + ++ TN+ GT + + +C Sbjct: 65 DVRDPFLCKKITQDCH--TVFHLAALIAIPYSYIAPNSYVETNVNGTLNMAQ------AC 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L + RF+ ST E+YG+ E P P SPYSA+K +D + +++ + + + Sbjct: 117 LDNNVT---RFMHTSTSEIYGTAQYVPIDEKHPSQPQSPYSASKIGADAMAMSYFNAFEM 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV ++ N YGP +IP IT++ G GD RD+ +V D R + + Sbjct: 174 PVSIARPFNTYGPRQSARAVIPTIITQIANGMKEIKLGDTSPTRDFNFVTDTCRGMMAIA 233 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR 292 + + IGE NIG N FEI + K ++++ F+ D RP Sbjct: 234 ESDKAIGETINIGSN---------FEISVQDTLEMIKDIMQSDVV-FVTDEQRLRPKDSE 283 Query: 293 RYAI--DSSKIKSEIGWFPQENMESGLNKTVCWY--LDN 327 + + D++ I+S + PQ N+ +GL +TV W+ +DN Sbjct: 284 VFRLWCDNTLIQSLTDFKPQYNLRTGLEETVRWFRNMDN 322 >gi|126178155|ref|YP_001046120.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125860949|gb|ABN56138.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 333 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 155/333 (46%), Gaps = 38/333 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNLFSFLQ-- 56 +R++VTGGAGFIGS + L++D +V+ +D N + EI +SN+ FL+ Sbjct: 23 IRILVTGGAGFIGSHIIERLLDDGH-EVVCLD------NFDPYYDPEIKKSNIQPFLENK 75 Query: 57 ------VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 DI +R+ + L+ D + + AA++ V S+ + N GT LLE Sbjct: 76 NFTLEVGDIRNRDTLTRLLE--GTDYVFHEAAQAGVRISVEDPIKPHEVNATGTLNLLEA 133 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 +R + + S+ VYG+++ F ED P P SPY +K +++ Sbjct: 134 SR---------DSGVKKIINASSSSVYGTVEYLPFDEDHPRRPVSPYGVSKLAAEEYCRV 184 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + YG+ + YGP P+ I + + + + ++GDG RD+ ++D V Sbjct: 185 FSELYGLKSVSLRYFTVYGPRMRPDLAISIFTRKALANEPITIFGDGTKTRDFTNIKDIV 244 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA + ++KG YNIGG + I L + +I + S +E IR+ + G Sbjct: 245 RANLIAMQKGEGA--YNIGGGHR-------VSIQTLAETIIETTGSSSE-IRYADTVKGD 294 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D+ K + +GW PQ ++E GL + W Sbjct: 295 AEHTFADTKKAERNLGWRPQVSLEEGLRRYAAW 327 >gi|254478847|ref|ZP_05092212.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035209|gb|EEB75918.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 328 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 17/323 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L LV ++ +V + N L+ + DI D Sbjct: 7 KVLVTGAGGFIGSHLVEKLV-EMGAKVRAFVRYNSKNNWGWLETSPYKDEIEIYAGDIRD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ ++K + + + AA + S + +I TNI GT+ +L+ R L + Sbjct: 66 YDSVKDSMKGVE--VVFHLAALIGIPYSYVSPLAYIKTNIEGTYNVLQAAR----ELGVE 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + ST EVYG+ E P P SPYSATK S+D + L++ +++ +PV + Sbjct: 120 K-----VIHTSTSEVYGTAKYVPIDELHPLQPQSPYSATKISADNIALSFYNSFNLPVTI 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N YGP +IP IT+++ G G+ + RD YV D V + + + Sbjct: 175 VRPFNTYGPRQSARAVIPTIITQILSGKKQIKLGNLRPTRDMNYVIDTVDGFIKIAECDK 234 Query: 242 -IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE NIG E D+V I L+ + E RF ++ R D+ K Sbjct: 235 LLGEVTNIGSGKEISIGDLVRLISRLMGVEVEIV---QEEQRFRPEK-SEVERLVCDNKK 290 Query: 301 IKSEIGWFPQENMESGLNKTVCW 323 I+ GW P+ ++E GL +T+ W Sbjct: 291 IREFTGWEPRYSLEEGLKETIQW 313 >gi|15615941|ref|NP_244245.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] gi|10176002|dbj|BAB07098.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] Length = 308 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 161/329 (48%), Gaps = 34/329 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS + L+N +V+V+D LT + IS N+ F + DI Sbjct: 4 KVLVTGGAGFIGSHIVELLLNK-GYEVVVVDNLT----TGQFENISSFNV-PFYKTDIVS 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E ++ + +P+ +++ AA+ V +SI TNIIGT LL SC Q Sbjct: 58 SE-LKDIFSKEKPNYVIHHAAQVDVTKSINLPTYDAETNIIGTINLL-------SCCCQY 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + D + + S+ VYG +ED P P S Y +K+ + + + YG+ + Sbjct: 110 EVD--KVIYASSCAVYGDTGDSSITEDFPIQPISFYGISKSVPEMYIRQFHDLYGLKYTI 167 Query: 182 SNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP + +I + T+ ++ +YG+G+ RD++YVED +A L L Sbjct: 168 FRYANVYGPRQTSKGEGGVISIFTTKALKREQPIIYGNGEQTRDFIYVEDIAKANALALD 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG---HDRRYA 295 G E +NI G N++ +I+ ++ ++ P + ++ R G H R Sbjct: 228 IGD-NEIFNI-GTNQKTSINELYNKVNVVRPFAPSA-------KYTSPREGDILHSRLSY 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + KI +GW P ++E G+ +T+ +Y Sbjct: 279 VKAKKI---LGWKPSVSLERGIQETLKYY 304 >gi|253567775|ref|ZP_04845186.1| nucleotide sugar epimerase [Bacteroides sp. 1_1_6] gi|251841848|gb|EES69928.1| nucleotide sugar epimerase [Bacteroides sp. 1_1_6] Length = 354 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 101/349 (28%), Positives = 157/349 (44%), Gaps = 42/349 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQSNL-FSFLQ 56 ++VTG AGFIGS L + L +D+K I+++ ID +T ++N LKEI N + F+ Sbjct: 13 VLVTGAAGFIGSNLVKRLFHDVKNIKIIGIDSITDYYDVNIKYERLKEIESLNRDWIFVH 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D++ + E +VN AA++ V SI D +I +N++G + +LE R Sbjct: 73 ASIADKDTVEEIFTENNVAIVVNLAAQAGVRYSITNPDSYIQSNLVGFYNILEACR---- 128 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 129 -----HHEVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++ EG + ++ G RD+ Y++D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTNKLREGKTIQIFNYGNCKRDFTYIDDIVEGVVR 243 Query: 236 VLKKGRIGER------------YNIGGNNERKNIDIVFEIGFLLDALI-----PKSYS-- 276 V++ E YNIG NN +D V L D LI P Y Sbjct: 244 VMQHAPEKENGEDGLLIPPYKVYNIGNNNPENLLDFV---TILQDELIRAKVLPLDYDFE 300 Query: 277 -HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H EL+ +PG D+ ++ + G+ P + GL WY Sbjct: 301 VHKELVPM---QPGDVPVTFADTELLEQDFGFKPNTTLREGLRSFAEWY 346 >gi|309792226|ref|ZP_07686698.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] gi|308225767|gb|EFO79523.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] Length = 300 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 26/311 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++I+TGGAGFIGS L LV+D +++VID + G +L + + L + DI Sbjct: 1 MKIIITGGAGFIGSHLVDRLVHDRAGELIVIDSMLR-GRPANLVQHRDNPLVQVVNADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +RS D I + AA+S+V ++ +TN+ GT +LE RL Sbjct: 60 DAEAMRSLCA--GADVIYHLAAQSNVMGAVSDLSYSFSTNVAGTVNILEAARL------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ EVYG +D+ E+ P+N + Y A+KA+ + + +TY + Sbjct: 111 --NGVRRVVFTSSREVYGEVDQLPVREEAPFNAKNAYGASKAAGELYARVFLNTYSVETA 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YG + +++IPL ++ +G + +YG GQ V D++YV+ V AL Sbjct: 169 VVRLANVYGSRDY-DRVIPLWLSAAAQGEPMIVYG-GQQVIDFVYVDQVVEALIRASTAA 226 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL--IRFIEDRPGHDRRYAIDS 298 IG+ NIG + + + L P + + +L R +E R+ D Sbjct: 227 IIGQPINIGSGQGTPLLQLAERVLAL-----PGAKTRLDLHPARSVE-----VARFTADI 276 Query: 299 SKIKSEIGWFP 309 S+++S +G P Sbjct: 277 SRMRSLLGLEP 287 >gi|117164760|emb|CAJ88309.1| putative UDP-glucose 4-epimerase [Streptomyces ambofaciens ATCC 23877] Length = 333 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 142/329 (43%), Gaps = 25/329 (7%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDICDR 62 VTG GFIGS L LV +V + + + L+ +S L + D+ D Sbjct: 9 VTGAEGFIGSHLTEALVASGH-RVRAMAQYNSFSSYGWLETLSPDVLDQVEIVLGDVRDP 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++ D + + AA + S ++ TN+ GT +LE R + Sbjct: 68 GSVRHLVEGA--DCVYHLAALIAIPYSYQAPHSYVDTNVTGTLNVLEAVRAQGTP----- 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ST E YG+ +ED P N SPY+A+KA D L ++ ++G PV+ Sbjct: 121 ----RLVHTSTSETYGTAQTVPITEDHPINTQSPYAASKAGGDRLADSYHASFGTPVVTL 176 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR- 241 N YGP +IP I ++ G GD + RD+ +V+D +A V Sbjct: 177 RPFNTYGPRQSMRAVIPTVIGQVAAGERTLTLGDLRPTRDFTFVKDTAQAFLAVGTAPAE 236 Query: 242 --IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 +G +N G E D+V IG ++D + L RP + R D Sbjct: 237 RVVGRTFNAGTGGEISVGDLVGLIGKVMDTPVDVREDAQRL------RPANSEVMRLVAD 290 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++++ GW P ++E GL TV ++ D Sbjct: 291 ATRLREATGWSPAHDLERGLGHTVDFFRD 319 >gi|330882974|gb|EGH17123.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. glycinea str. race 4] Length = 132 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 80/131 (61%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS VL +D LTYAGNL +L+ + ++ F+ +I D Sbjct: 2 ILVTGGAGFIGSNFVLQWCARNDEPVLNLDALTYAGNLANLQSLEGNDQHRFVHGNIGDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E +P A+V+FAAESHVDRSI G + F+ TN++GTF LLE R +W+ L Sbjct: 62 ELLTRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATD 121 Query: 123 KDQFRFLQIST 133 K FRFL + T Sbjct: 122 KTAFRFLHVYT 132 >gi|297585300|ref|YP_003701080.1| NAD-dependent epimerase/dehydratase [Bacillus selenitireducens MLS10] gi|297143757|gb|ADI00515.1| NAD-dependent epimerase/dehydratase [Bacillus selenitireducens MLS10] Length = 336 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L + L+++ + QV+ +D + Y L + L + + + FSF + Sbjct: 1 MNILVTGAAGFIGMYLSKRLMDEGQ-QVIGVDNINDYYETQLKKDRLALLEEYDQFSFYK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ DR K+ + D ++N AA++ V SI ++ +N++G +LE R + Sbjct: 60 VDLADRNSFNQIFKDNKIDIVINLAAQAGVRYSIENPHAYVDSNLVGFVNVLEACRHY-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 D + S+ VYG+ K F + D +P S Y+ATK S++ + + H Y Sbjct: 118 -------DVKHLIYASSSSVYGANQKMPFATTDEVNHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ +++ G + ++ +G+ +RD+ Y++D V + Sbjct: 171 NIPTTGLRFFTVYGPMGRPDMAYFSFTKKIVAGETIQVFNNGEMMRDFTYIDDIVDGIVR 230 Query: 236 VLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L G + YNIG N K +D + + L K Y Sbjct: 231 LLDHPPKGNPDFDRENPTPNESYAPYKVYNIGNNQPVKLMDFIQTLEKHLGIEAKKEY-- 288 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D ++ + G+ P ++ GL K V WY D Sbjct: 289 ------LPMQPGDVKATYADIDELSRDTGFKPTTTIDEGLGKFVAWYKD 331 >gi|315230849|ref|YP_004071285.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] gi|315183877|gb|ADT84062.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] Length = 308 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 41/330 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L D +V+VID L Y+G + ++ E + F+Q DI D Sbjct: 7 IVVTGGAGFIGSHIAEELSEDN--EVVVIDNL-YSGKVENVPENVK-----FIQADIRDY 58 Query: 63 ECIRSALKE----FQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 E I + + F A+V+ V++ IL + N++GT +L+ L Sbjct: 59 ESIAEIISQADYVFHEAALVSVV--ESVEKPILTEE----INVLGTLNILK-------AL 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S+ + + S+ VYG ED P SPY TK S +Y + YG+P Sbjct: 106 SEG---HGKLIFASSAAVYGDNQNLPLKEDEKPKPLSPYGVTKVSGEYYCRVFYELYGVP 162 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +G Y+ +I + I R ++ + ++GDG+ RD++YV+D V+A L Sbjct: 163 TVTLRYFNVFGERQGYNQYAGVISIFINRALKNEPLIIFGDGKQTRDFIYVKDVVKANIL 222 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V +K + GE +N+ +++ +I I + S + +I F + RPG + Sbjct: 223 VAEKEKANGEVFNVARGERTTILELAMKI-------IDATNSSSSII-FDKPRPGDIKHS 274 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SKIK ++G+ P +++ GL +T+ WY Sbjct: 275 QADISKIK-KLGFKPDYSLKEGLLRTIEWY 303 >gi|90961955|ref|YP_535871.1| UDP-glucuronate 4-epimerase [Lactobacillus salivarius UCC118] gi|90821149|gb|ABD99788.1| UDP-glucuronate 4-epimerase [Lactobacillus salivarius UCC118] Length = 359 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/359 (26%), Positives = 165/359 (45%), Gaps = 49/359 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEIS------QSN 50 R+++TGGAGFIG+ L L+ +K + +L +D + Y +L L++I + + Sbjct: 10 RILITGGAGFIGANLILSLLQTVKSVNILTVDNINDYYDVSLKEWRLQQIESEATQHEES 69 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F++ DI D + +F+PD +VN AA++ V SI D +I +NIIG + +LE Sbjct: 70 KFEFIKGDISDVGLVNQIFADFKPDIVVNLAAQAGVRNSITNPDAYIKSNIIGFYNILEA 129 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKAS 163 R + +++ + F S+ +YG+ +++PY P S Y+ATK S Sbjct: 130 CRHSYD--NENGVEHLVFA--SSSSIYGN------GKEIPYKTDSNTDKPISLYAATKKS 179 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 + L + H +GIP+ YGP P+ ++I + ++ G RD+ Sbjct: 180 DEMLAHVYSHLFGIPITGLRFFTVYGPGGRPDMAYFKFTKKLINDEKIQIFNYGNCRRDF 239 Query: 224 LYVEDHVRALYLVLKKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALI- 271 Y++D V + V+ + E+ YNIG ++ ++ V L D L+ Sbjct: 240 TYIDDVVEGVKRVMSG--VPEKSEQDLEPAYRIYNIGNHHPENLMEFV---KILQDELVR 294 Query: 272 ----PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PK Y + + +PG D S+++ + + P + GL K WY D Sbjct: 295 ANVLPKDYDFEGHMELVPMQPGDVAVTYADISELEKDFNFKPDTRLRVGLRKFAEWYRD 353 >gi|86359934|ref|YP_471824.1| nucleoside diphosphate epimerase protein [Rhizobium etli CFN 42] gi|86284036|gb|ABC93097.1| probable nucleoside diphosphate epimerase protein [Rhizobium etli CFN 42] Length = 679 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 49/366 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 +IVTGG+GF+G L L++D + V+++D L +G NL+ LKE + L D+ Sbjct: 330 IIVTGGSGFVGCNLADRLLSDGE-DVIILDNLARSGVDQNLSWLKERHGGRVHPVL-ADV 387 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I +A ++ + A+ ++AA++ V S++ E TN GT +LE R Sbjct: 388 RDLLGIEAAFRDAK--AVFHYAAQTAVTTSLVDPLEDFETNARGTLNVLESIR------R 439 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLF------------------SEDMPYNPSSPYSAT 160 K+ F ST++VYG+LD G+ ED P + +PY + Sbjct: 440 AGKRAPIIF--ASTNKVYGALDDLGMIELDDRYLPEDESIRTLGIGEDRPLDFCTPYGCS 497 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D +L + +YGIP + S YGP F + + + R + G + +YGDG Sbjct: 498 KGVADQYILDYAKSYGIPAAVLRMSCIYGPRQFGTEDQGWVAHFLIRALGGEPISIYGDG 557 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGN--NERKNIDIVFEIGFLLDALIPK 273 + VRD L+V+D V A ++L G++ G+ +N+GG N + ++ EI L + Sbjct: 558 KQVRDILHVDDAVAAYRVLLSNIGQVSGKAFNLGGGPRNAVSVLAVLREIEELAGRPVET 617 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 S+ R G + D+++++ E GW GL W + + + R Sbjct: 618 SFGPW--------RAGDQLYFVADTTRLEQETGWQAGIGWRHGLRHLAEWLIAHRFGGRQ 669 Query: 334 LYKELK 339 + +E + Sbjct: 670 IRREKR 675 >gi|55379498|ref|YP_137348.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232223|gb|AAV47642.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 334 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 30/347 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY------AGNLNSLKEISQSN--LF 52 M+++VTGGAGFIG L + D V++ ++ + N+++ +E ++++ + Sbjct: 7 MQILVTGGAGFIGGHLAQRFAADGHDVVVLDNRDPFYDLDIKQHNVDAGQEAARNSDGSY 66 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F++ D+ D E + + + D + + AA++ V S+ ++ N+ GT LL+ Sbjct: 67 EFIEGDVRDAELVTDLVAD--ADYVYHQAAQAGVRPSVKNPRKYDEVNVNGTLNLLD--- 121 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +C + + RF+ S+ VYG + E P P SPY A+K +++ A+ Sbjct: 122 ---ACRDEGIE---RFVMASSSSVYGKPQYLPYDEQHPTTPVSPYGASKLAAERYACAYS 175 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y + + YGP P I ++R G +YGDG RD+ Y+ED + A Sbjct: 176 EVYDLSTVALRYFTVYGPRMRPNMAISNFVSRCHNGEPPVIYGDGTQTRDFTYIEDVIDA 235 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + L+ + G+ NIG + NI+I + D + P +L E+R D Sbjct: 236 NMTLLHEDAADGKAVNIGSTD---NIEIKTLATEIRDQIDP------DLDLVYEERHDAD 286 Query: 292 RRYAIDSSKIKSE-IGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 + ++ E +G+ P + G+ K + WY DN W+ PL ++ Sbjct: 287 AEHTHAATDRAEELLGYDPDHTIREGVAKFIDWYRDNRDWYEPLVRQ 333 >gi|315058800|gb|ADT73129.1| Legionaminic acid biosynthesis protein PtmX, NAD-dependent epimerase/dehydratase [Campylobacter jejuni subsp. jejuni S3] Length = 323 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 169 NIARPFNTYGPKQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKTSLEEGLRQSIEYFKEN 312 >gi|320104235|ref|YP_004179826.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319751517|gb|ADV63277.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 370 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 54/358 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL-------- 51 R++VTGGAGFIGS L L+ +L VL +D N + + + Q+NL Sbjct: 25 RVVVTGGAGFIGSRLVDRLL-ELGADVLALD------NFDPFYPRTVKQANLQLARSRHV 77 Query: 52 --FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F ++ D+ D + L+EF+PD + + AA++ V S+ ++ TN++GT LL+ Sbjct: 78 TRFRLIEADLRDGAALERHLREFRPDLVAHLAAKAGVRPSLESPADYFDTNVVGTIRLLD 137 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSL-----DKGLFSEDMPYNPSSPYSATKASS 164 + L + + R + S+ VYG +G D P SPY+A+KAS+ Sbjct: 138 ALK-HLDTLEESGRGP-RLVFASSSSVYGDRRHDDPHQGFVETDPIDRPVSPYAASKASA 195 Query: 165 DYLVLAWGHTYG------------IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHV 211 + V A+ H IP ++ +GP + P+ L R+I EG V Sbjct: 196 ELAVRAFHHARTLRLRQINPDAPPIPTIILRFFTAFGPRNRPD-LALAKFARLIREGRPV 254 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVL------KKGRIGERYNIGGNNERKNIDIVFEIGF 265 ++GDG RD+ YV+D V + L + + E +N+G + + Sbjct: 255 PMFGDGSTERDYTYVDDLVDGVVRALVFEPSPQSSQEVEVFNLGHSEP-------VRLST 307 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++D L + I + ++PG R D + +S +GW P + E G+ V W Sbjct: 308 MIDTLA-AALGRPARIERLPEQPGDVGRTRADIRRARSLLGWSPVTSFEEGVTHFVEW 364 >gi|282895549|ref|ZP_06303686.1| NAD-dependent epimerase/dehydratase [Raphidiopsis brookii D9] gi|281199582|gb|EFA74445.1| NAD-dependent epimerase/dehydratase [Raphidiopsis brookii D9] Length = 332 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 159/334 (47%), Gaps = 23/334 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV + +++ V+ + G L+ NL F DI Sbjct: 3 KILVTGADGFIGSHLTEALVREGYQVRAFVLYNSFNSWGWLDHSPREVIDNLEIF-SGDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++SA+ D +++ AA + S ++ TNI GT +L+ R + Sbjct: 62 RDPYNVKSAMNGC--DVVLHLAALIAIPYSYHSPATYVETNITGTLNVLQAAR----SVG 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K + ST EVYG+ +E+ P SPYSATK +D + +++ +++G PV Sbjct: 116 VEK-----VVHTSTSEVYGTAKFVPITEEHPLQGQSPYSATKIGADQMAMSFYYSFGTPV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK- 238 + N YGP +IP IT++ G G RD+ Y++D VR + K Sbjct: 171 AIIRPFNTYGPRQSARAVIPTVITQIASGKRQIKLGSLHPTRDFNYIKDTVRGFIAIAKS 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + +GE NIG N E I I + + +++ + T+ +R ++ +R +A D+ Sbjct: 231 QSSVGEVINIGSNFE---ISIGDTVELIAESMGVEVEIVTDDVRLRPEKSEVNRLWA-DN 286 Query: 299 SKIKSEIGWFP----QENMESGLNKTVCWYLDNN 328 SK K I W P +E + GL +T W+ ++ Sbjct: 287 SKAKRVINWEPLYAGREGFKQGLIETAAWFTNST 320 >gi|148508229|gb|ABQ76016.1| GalE2 [uncultured haloarchaeon] Length = 328 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 30/344 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ---------SNL 51 MR++VTGGAGFIG L + D V+V+D L + ++ + S Sbjct: 1 MRILVTGGAGFIGGHLAERFITDGH-DVIVLDNLEPFYDTRIKQQTIEVCRTCADDGSGS 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ D+ D + + + + + + + AA++ V +S+ ++ N+ GT +L+ Sbjct: 60 YRFIEGDVRDVDIVSELVSDAE--YVYHQAAQAGVRQSVSDPRKYDEINVEGTLNILDAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + R + S+ VYG + + E P P SPY A+K +++ A+ Sbjct: 118 R---------DTETERVVLASSSSVYGRPEYLPYDESHPTTPVSPYGASKLAAERYACAY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y +P + YGP P I ++R + +YGDG RD+ ++ D V Sbjct: 169 SEVYDLPAVALRYFTVYGPRMRPNMAISNFVSRCLNEQPPVVYGDGTQTRDFTFIGDIVE 228 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + L+ + GE NIG + NIDI+ + D L P+ + I F E Sbjct: 229 ANVTLLTESAADGEAVNIGSTD---NIDILTLAEEIRDQLAPE-----QEITFSERHDAD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K + +G+ P + G+ + V WY +N W+ PL Sbjct: 281 AEHTHAAVEKARDVLGYEPTHTIREGVEEFVEWYHENRDWYEPL 324 >gi|213966020|ref|ZP_03394209.1| nucleoside-diphosphate-sugar epimerase [Corynebacterium amycolatum SK46] gi|213951315|gb|EEB62708.1| nucleoside-diphosphate-sugar epimerase [Corynebacterium amycolatum SK46] Length = 333 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS L L+ + V +D L++ G L +L++ S ++ F F+ D+ + Sbjct: 23 RALVTGGAGFIGSTLVDRLLAE-GYAVTALDDLSH-GKLENLQQASLNDDFEFITADVLE 80 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L+ +P+ I + AA+ V S+ T NIIGT L + R Sbjct: 81 VDW-DELLERSRPEVIFHLAAQIDVRISVADPVRDATLNIIGTIKLADAAR--------- 130 Query: 122 KKDQFR--FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K R S +YG+ ++ SE +P NP SPY+A+KA+ + + + + YG+ Sbjct: 131 -KHGVRKVVFTSSGGSIYGTPEELPVSESVPVNPMSPYAASKATGELYLNMFRNLYGLEC 189 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + R++ G ++GDG N RD++YV+D V A Y Sbjct: 190 SHIAPANVYGPRQDPHGEAGVVAIFAQRLLAGEPTKVFGDGGNTRDYVYVDDVVDAFYRA 249 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G R+NIG E + L +L+ ++ + F R G R A+ Sbjct: 250 SGEVGGGMRFNIGTGVETSDRQ--------LHSLVAQAADAEDNPEFAPPRTGDVARSAL 301 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ + +GW P ++ G+ +TV ++ Sbjct: 302 DPTRAREVLGWEPAMSIHEGVARTVEYF 329 >gi|255281083|ref|ZP_05345638.1| UDP-glucuronate 5'-epimerase [Bryantella formatexigens DSM 14469] gi|255268531|gb|EET61736.1| UDP-glucuronate 5'-epimerase [Bryantella formatexigens DSM 14469] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 25/344 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 ++VTG AGFIG +L R L + I+V+ ID + Y +L L+++ + F FL+ Sbjct: 13 ILVTGAAGFIGFSLIRRLCDSAADIRVIGIDNMNSYYDVSLKEARLRKLKEQKAFRFLRG 72 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D+ + E+ P +VN AA++ V SI + +I++NI+G + +LE R + Sbjct: 73 DIADKSFVEKIFSEYHPQIVVNLAAQAGVRYSIENPEAYISSNIVGFYNILEGCRHSYHS 132 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + + S+ VYG+ K ++ D + P S Y+ATK S + L A+ Y Sbjct: 133 GGVE-----HLVYASSSSVYGANQKIPYATDDNTDYPVSLYAATKKSDELLAHAYAKLYD 187 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ ++ G + ++ G +RD+ Y++D V + V Sbjct: 188 IPSTGLRFFTVYGPWGRPDMAYFSFTEKLRSGQKIPIFNHGHCMRDFTYIDDIVEGIVRV 247 Query: 237 L------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELIR 282 + KKG+ G + YN+G + +D + + ++P + + Sbjct: 248 VQKAPSRKKGKDGLPVPPCDLYNLGNGHPENLLDFADTLQQELIRAGVLPAVDNFEKCRE 307 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F +PG D+ + G+ P ++ GL K WY D Sbjct: 308 FKAMQPGDVAVTYADTVPFERTFGFKPSTSLRDGLRKFAEWYGD 351 >gi|90417219|ref|ZP_01225146.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2207] gi|90330995|gb|EAS46256.1| dTDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2207] Length = 114 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/112 (49%), Positives = 73/112 (65%) Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +YGDG N+ +LY+ H + V++ G+ G YNIGGNNE NI I I L+D I Sbjct: 1 MYGDGSNIPYFLYLHGHCPGIDAVVRSGKSGATYNIGGNNEWANIAICRIICDLMDKRIA 60 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + H +LI F+ DRPGHD RYA+DSS+I +E+ W PQE ESG+ KT+ WY Sbjct: 61 IATPHQQLIEFVTDRPGHDWRYAVDSSRISNELNWQPQETFESGIIKTLGWY 112 >gi|83647522|ref|YP_435957.1| nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] gi|83635565|gb|ABC31532.1| Nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] Length = 326 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/327 (29%), Positives = 141/327 (43%), Gaps = 27/327 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DIC 60 +VTG GFIGS +LV L + + L+Y + N + QS L V DI Sbjct: 5 LVTGADGFIGS----HLVEMLHARGYQVRALSYYNSFNDWGWLEQSACLKDLDVWNGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D K D + N AA + S D ++ NI GT + + RL Sbjct: 61 DPHYCIELTKGV--DVVFNLAALIGIPYSYTAPDTYVDVNIRGTVNICQGARL------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST EVYG+ E P P SPYSA+K ++ + L++ + + +PV Sbjct: 112 --NGVGRLVHASTSEVYGTAKYAPIDEKHPLQPQSPYSASKIGAESMALSFHNAFQLPVT 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 ++ N YGP +IP I+++ G GD RD+ +VED + L + Sbjct: 170 VARPFNTYGPRQSARAVIPTIISQIAAGKSSIKLGDPTPTRDFNFVEDTCLGFIELAECE 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 IG+ NIG N E D I L+ A + RP + R D Sbjct: 230 QAIGQVVNIGSNTEISIGDTFELICRLMQAEVVMETDQQRA------RPANSEVFRLKCD 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ IKS G+ P+ ++E GL KT+ W+ Sbjct: 284 NALIKSLTGYEPKYSLEQGLRKTIDWF 310 >gi|34863493|gb|AAQ82923.1| putative nucleotide sugar epimerase [Raoultella terrigena] Length = 336 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG C+ L+ + QV+ ID + Y NL + ++ QS+LFSF +V Sbjct: 3 MKFLVTGAAGFIGFHTCKRLL-EAGHQVVGIDNMNDYYDVNLKQARLDLLQSSLFSFHKV 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ I E + + +++ AA++ V S+ + +N+IG +LE R Sbjct: 62 DLADRQGIAELFAEEKFNRVIHLAAQAGVRYSLENPHAYADSNLIGYLNILEGCR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 +K + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 117 --HNKVEHL--LYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + M+EG + +Y G+ RD+ YV+D V A+ V Sbjct: 173 IPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYVDDIVEAIVRV 232 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G + YNIG ++ + +D + + L + K+ Sbjct: 233 QDVIPQSNAEWTVENGSPADSSAPYRVYNIGNSSPVELMDYITALEEALGMVAEKN---- 288 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D+ + +G+ PQ ++ G+ V WY Sbjct: 289 ----MMPIQPGDVLETSADTKPLYDLVGFKPQTTVKEGVQNFVDWY 330 >gi|289548768|ref|YP_003473756.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484] gi|289182385|gb|ADC89629.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484] Length = 322 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 164/345 (47%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL----NSLKEISQSNLFSFLQVD 58 ++VTG AGFIG + + L+ V+ ID L + ++ + L+ + + F F QVD Sbjct: 4 ILVTGCAGFIGWKVSQKLLEK-GFHVVGIDNLNHYYDVRLKWHRLENLKRFPSFVFYQVD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + + + DA++N AA + V S+ ++ TN +GT LL+ + Sbjct: 63 VENMEALSVVFQVHKFDAVINEAARAGVRSSMEDPFVYMRTNALGTLHLLDLCK------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + +F+ ST +Y F ED+P N P SPY+A+K +++ + + + YGI Sbjct: 117 ---RYGVQKFVLASTSSLYAGQSMP-FREDLPVNTPISPYAASKKAAEVIAYTYHYLYGI 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRAL 233 V + YGP P+ + I +EG + ++GDG RD+ Y++D VRAL Sbjct: 173 DVTVLRYFTVYGPAGRPDMSVFRFIKWALEGKPIQVFGDGSQKRDFTYIDDIAEGTVRAL 232 Query: 234 ----YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 Y ++ N+GGN ++++ L+ K +++ + Sbjct: 233 TPLGYQII---------NLGGNRPHSLLEVI--------DLVEKYTGKKVQLQYGDFHKA 275 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + D K K +GW PQ ++E G+ +TV W+L+N W R + Sbjct: 276 DMQATWADIGKAKDLLGWEPQVSLEEGIRRTVEWFLENWDWLREI 320 >gi|170288229|ref|YP_001738467.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2] gi|281411728|ref|YP_003345807.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] gi|170175732|gb|ACB08784.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2] gi|281372831|gb|ADA66393.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] Length = 309 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V+V+D L+ +G + +L + F + I Sbjct: 1 MNVLVTGGAGFIGSHVVDKLIEN-GYGVIVVDNLS-SGKVENLNRNAL-----FYEQSIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +P+ + + AA++ V S+ TNIIG+ +LLE++ Sbjct: 54 DEEMMERIFSLHRPEYVFHLAAQASVAISVREPVRDAETNIIGSLVLLEKS--------- 104 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ ST +YG K + E +P SPY K S + + + YG+ Sbjct: 105 IKHGVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLK 164 Query: 179 VLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + +N YGP P ++ + RM+ G V ++GDG+ VRD++YV+D VRA L Sbjct: 165 YTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLL 224 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++KG E +NI G ++ +F+ L+ + + + + R G R+ Sbjct: 225 AMEKGD-NEVFNI-GTGRGTTVNQLFK-------LLKEITGYDKEPVYKPPRKGDVRKSI 275 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +K K ++GW P+ ++E GL TV ++ Sbjct: 276 LDYTKAKEKLGWEPKVSLEEGLKLTVEYF 304 >gi|69246553|ref|ZP_00603999.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] gi|258616588|ref|ZP_05714358.1| nucleotide sugar epimerase [Enterococcus faecium DO] gi|68195221|gb|EAN09676.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] Length = 352 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 41/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 + VTG AGFIGS L + L D++ ++V+ ID + Y L L+E+ + F F++ Sbjct: 11 VFVTGVAGFIGSNLTKRLFADIEGVKVVGIDNMNDYYDVRLKEARLEELFKFENFVFVKG 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ D+ I + +E P+ +VN A++ V SI+ D +I N+IG + +LE R + Sbjct: 71 NLADKAVITAIFEEHHPNIVVNLGAQAGVRYSIINPDAYIEGNMIGFYNILEACRHYPVE 130 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 131 ---------HLVYASSSSVYGSNKKIPYSTDDKVDNPVSLYAATKKSNELMTHAYSKLYN 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ ++++G + ++ G RD+ Y++D V + + Sbjct: 182 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGETIQIFNYGNCKRDFTYIDDIVEGVIRI 241 Query: 237 LK---KGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALI-----PKSY---S 276 ++ + + GE YNIG +N +D V LL+ LI P+ Y + Sbjct: 242 MQGAPEKQTGEDGLPVPPYAVYNIGNHNPENLLDFV---QILLEELIRAGVLPEDYDFEA 298 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H EL+ +PG D+ ++ + G+ P + +GL K WY Sbjct: 299 HKELVPM---QPGDVPVTYADTEALERDYGFKPATPLRTGLRKFAEWY 343 >gi|291448818|ref|ZP_06588208.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 15998] gi|291351765|gb|EFE78669.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 15998] Length = 335 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 94/338 (27%), Positives = 146/338 (43%), Gaps = 27/338 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 ++VTG GFIGS L LV +++ V K YA G+L + + F+ D+ Sbjct: 13 VLVTGAEGFIGSTLVDLLVERGARVRAFVHYK-PYADKGHLARYLDDPHGPV-EFIAGDV 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A++ D + + AA + S ++ TN++GT + E R Sbjct: 71 GDAGRVMDAVEGC--DTVFHLAALIGIPYSYDSPGAYVRTNVVGTENIAEACR------- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R L ST EVYG+ ED P P SPYSA+K +D + L+ H + +PV Sbjct: 122 --RHSVRRLLHTSTSEVYGTALTAPIGEDHPLQPQSPYSASKIGADMMALSHWHAFELPV 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP + ++ G+ G RD+ YV D + Sbjct: 180 TVVRPFNTYGPRQSARAVIPAILAQLHSGAREIRLGSLTPTRDFTYVTDTAAGFLALAGC 239 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHD--RRYA 295 R +GE N+G E +G L ALI S E+ + RP R Sbjct: 240 DRALGESVNLGTGRE-------ISVGDLAKALIAASGRDAEIVVDPARLRPSGSEVHRLL 292 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D+++ ++ GW P+ +E GL +T W D+ + P Sbjct: 293 SDNTRARTWAGWEPEVGLEEGLERTSAWVADHLHLFAP 330 >gi|118471043|ref|YP_890363.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium smegmatis str. MC2 155] gi|118172330|gb|ABK73226.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium smegmatis str. MC2 155] Length = 315 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +VTG AGFIGS L L+ D V+ +D L+ +G +L S+ F F++ DI Sbjct: 3 VRTLVTGAAGFIGSTLVDRLLADGH-GVVGLDDLS-SGRAENLHSAENSDKFEFVKADIV 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L EF+P+ I + AA+ V RS+ T N++GT L E RL Sbjct: 61 DAD-LTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVR--- 116 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYG+ SEDMP NP+SPY+A K + + + + + Y + Sbjct: 117 ------KVVHTSSGGSVYGTPPAYPTSEDMPVNPASPYAAGKVAGEVYLNMYRNLYDLDC 170 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG + RD+++V+D V A Sbjct: 171 SHIAPANVYGPRQDPHGEAGVVAIFSEALLAGRTTKIFGDGSDTRDYVFVDDVVDAFVRA 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+N+G E + L I + + F R G RR + Sbjct: 231 GGPAGGGQRFNVGTGVETSTRE--------LHTAIAGAVGAPDEPEFHPPRLGDLRRSRL 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+++ + +GW PQ + G+ KTV ++ Sbjct: 283 DNTRAREVLGWQPQVALAEGIAKTVEFF 310 >gi|13475647|ref|NP_107214.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] gi|14026403|dbj|BAB53000.1| probable UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] Length = 334 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 24/329 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV N + L + + G L+ L + +S L ++ D+ Sbjct: 7 KVLVTGADGFIGSHLTEALVRNGADVTALALYNSFDSHGWLDDLPDKIRSQL-KLVRGDV 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ + + AA + S A ++ TNI+GT +LE R W Sbjct: 66 RDSAFLNRIVR--GQAVVFHLAALIAIPYSYAAAQSYVETNILGTVNVLEAARQW----- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ E P SPYSA+K +D + ++ ++ +PV Sbjct: 119 ----ETERVVHTSTSEVYGTAQTMPIRETHPLQGQSPYSASKIGADMMAESYARSFDVPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGS-HVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ N YGP ++P + + ++ + GD +RD +VED A Sbjct: 175 VIMRPFNTYGPRQSERAIVPTIVRQALDPKCPSIMVGDTSPIRDLTFVEDTAAAFLTAGL 234 Query: 239 KG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI- 296 G G YN G D+ + +L+ K H + R RP + A+ Sbjct: 235 AGLEFGHAYNAGSQRAATISDV---LDLVLELSGSKKPVHRDERRL---RPQNSEVRALL 288 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWY 324 DSS+ + E GW Q ++ GL +T+ W+ Sbjct: 289 ADSSRFEGETGWRAQTSLRDGLERTIAWW 317 >gi|15789397|ref|NP_279221.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|169235109|ref|YP_001688309.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Halobacterium salinarum R1] gi|10579717|gb|AAG18701.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|167726175|emb|CAP12948.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Halobacterium salinarum R1] Length = 328 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 153/348 (43%), Gaps = 32/348 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL-NSLKEISQS------NL 51 MR++VTGGAGFIG L V+ V+V+D Y + + E+ Q+ Sbjct: 1 MRILVTGGAGFIGGHLAERFVS-RGHDVVVLDNFDPFYDTRIKDHTVEVCQNLADDGDGS 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + ++ D+ D E + + + D + + A ++ V S+ ++ N+ GT +L+ Sbjct: 60 YRLVEGDVRDAELVEELVADV--DYVYHQAGQAGVRPSVEDPRKYNEVNVDGTLNVLDAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R K + R + S+ VYG + + E P P SPY A+K +++ V A+ Sbjct: 118 R---------KTEIERVVFASSSSVYGKPEYLPYDEVHPTTPVSPYGASKLAAERYVCAY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y +P + YGP P I ++R + G +YGDG RD+ Y+ED V Sbjct: 169 SEVYDLPTVALRYFTVYGPRMRPNMAISNFVSRCLNGEPPVVYGDGTQTRDFTYIEDVVD 228 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 A L+ GE NIG + NIDI+ + D + P EL I F E Sbjct: 229 ANEALLTDDAADGEVLNIGSTD---NIDILTLAEEIRDQVAP------ELDIEFAERFEA 279 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D SK +G+ P + G+ + V WY N W+ PL E Sbjct: 280 DAEHTHADISKANELLGYEPSRTIREGVQEFVEWYRANRDWYEPLVLE 327 >gi|147921373|ref|YP_684813.1| putative dTDP-glucose 4-6-dehydratase [uncultured methanogenic archaeon RC-I] gi|110620209|emb|CAJ35487.1| putative dTDP-glucose 4-6-dehydratase [uncultured methanogenic archaeon RC-I] Length = 318 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 32/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGG+GFIGS LC YL+ + V+ +D L +G L ++ + ++ F F++ DI + Sbjct: 6 LVTGGSGFIGSHLCEYLLGKGE-NVIAVDNLG-SGRLENIGGVMGNDRFRFIRHDIREPL 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I + D + N A+ + A+E + TN +GT+ +++ L+ +KK Sbjct: 64 QIDGKI-----DFVYNLASRASPVDFFTQAEEILMTNSLGTYNMIQ--------LALEKK 110 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RFL+ ST E YG E P P Y K S+ L +A+ +G+ Sbjct: 111 A--RFLEASTSESYGDPTISPQPETYWGNVNPIGPRGCYDEAKRFSEALTMAFVRYHGLD 168 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P+ +++P + + G + +YG+G R + YV D VR +YL Sbjct: 169 GRIIRIFNTYGPRMRPDDGRVVPNFTMQALAGEPMTVYGEGSQTRSFCYVSDLVRGIYLA 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + + GE N+G E ++ +I I S S E+ P R Sbjct: 229 MNRDVRGEVINLGNPTEMTVLEFAKKI-----KAITGSSSEIVFRPLPENDPMQRRP--- 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P+ ++ GL T+ W+ Sbjct: 281 DIGKAKRLLGWEPEVGLDEGLQLTIEWF 308 >gi|284044630|ref|YP_003394970.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283948851|gb|ADB51595.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 329 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 154/337 (45%), Gaps = 37/337 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTGG G +G+ L R LV ++ VL D+ + L L E+ ++ + D+ D Sbjct: 7 VFVTGGYGLLGAWLVRALVERGDRVVVLQRDRTPRSALL--LGELERA--LDIVHGDLND 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + AL E++ D + + AA++ V +RS L E TN+ GT+ LLE RL Sbjct: 63 PGLVARALGEYEVDTVFHLAAQTIVGTANRSPLATFE---TNVRGTWTLLEACRL----- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R L ++D+ YG+ + ED P PY +KA++D + ++ HTY +P Sbjct: 115 ----HGAERVLVAASDKAYGASTTLPYREDHPLQARFPYDVSKAATDLIARSYWHTYALP 170 Query: 179 VLLSNCSNNYGPYHF-PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ +N YG +L+P AI + G + DG RD+LYVED V A L+ Sbjct: 171 VAVTRFANLYGGGDLNRSRLVPEAIGAALAGRAPVIRSDGTPERDFLYVEDAVAAYLLLA 230 Query: 238 KKGRI----------GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 GE +N GG D+V I + + +R Sbjct: 231 DALDADAGRDATLARGEAFNAGGGRPYAVGDVVARICAIAGTDVEPD------VRGAGTP 284 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G R +D SK++ GW P +++ GL +TV WY Sbjct: 285 AGEIDRQYVDPSKLRELTGWAPAVSLDEGLERTVAWY 321 >gi|220933110|ref|YP_002510018.1| Nucleoside-diphosphate-sugar epimerase [Halothermothrix orenii H 168] gi|219994420|gb|ACL71023.1| Nucleoside-diphosphate-sugar epimerase [Halothermothrix orenii H 168] Length = 318 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 33/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++ TGGAGFIGS + L+N + V+V+D L+ Y NLNS + + ++ S D Sbjct: 1 MIILATGGAGFIGSNIVDKLIN-IGHDVVVVDNLSTGYKTNLNSTAKFYKVDIISSDIED 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +E I +++ AA+ V RS+ NI GT LLE R Sbjct: 60 IIKKEKITH---------VIHHAAQIDVQRSVKDPIFDADNNIKGTINLLEACR------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + + S+ VYG D E P SPY +K + ++ + +G Y + Sbjct: 105 ---KNNVEKIIYASSAAVYGEPDYLPIDESHPIKAMSPYGISKHTPEHYIKMYGELYDLK 161 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + +N YGP P+ ++ + +M+ G +YGDG+ RD++YVED V A Sbjct: 162 YTILRYANVYGPRQDPKGEGGVVSIFTDKMVNGEQPAIYGDGKQTRDFIYVEDIVAANLK 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L +G + NI + I++ + +L I E I F +RPG R Sbjct: 222 ALNRGD-NQIVNISTRTQTSVIELFKTMKDILKMDI-------EPI-FNRERPGDIRHSY 272 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D+S+ K + W P+ +++SGL +T+ +Y Sbjct: 273 LDNSRAKEVLDWAPRYDLKSGLTRTISYY 301 >gi|258516021|ref|YP_003192243.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257779726|gb|ACV63620.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 313 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 98/331 (29%), Positives = 156/331 (47%), Gaps = 32/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+N+ +V V+D + G +++ + ++ + D+C Sbjct: 1 MRCLVTGGAGFIGSNLVHTLINE-GYKVRVLDNFS-TGKFENIETVIKN--IDLIVGDLC 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCL 118 + +R A+K D + + AA V RS+ AD + T NI GT + L Sbjct: 57 REDDVRRAVKGV--DIVFHQAALPSVPRSV--ADPYTTNRVNIEGTLNVF---------L 103 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + S+ VYGS +K E M P SPY+A+K + + + YG+ Sbjct: 104 AARDSGVKRVVYASSSSVYGSNEKLPKEETMLTRPMSPYAASKLAKEVYGRIFYDLYGLE 163 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +GP PE +IP IT +++G +YGDG+ RD+ Y+ D V+A Sbjct: 164 TVGLRYFNVFGPRQNPESQYAAVIPKFITALLKGKSPDIYGDGEQSRDFTYISDVVKANL 223 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + G GE +NI + I L I S + + RPG + Sbjct: 224 LAARGSGAAGEVFNIA-----RGTKINLNELLNLLKKITGSKAEAA---YAASRPGDVKH 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K +S +G+ P+ ++E+GL +TV W+ Sbjct: 276 SLAAIEKAQSILGYQPEVSLEAGLRQTVAWF 306 >gi|239945360|ref|ZP_04697297.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 15998] gi|239991816|ref|ZP_04712480.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 11379] Length = 342 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 94/338 (27%), Positives = 146/338 (43%), Gaps = 27/338 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 ++VTG GFIGS L LV +++ V K YA G+L + + F+ D+ Sbjct: 20 VLVTGAEGFIGSTLVDLLVERGARVRAFVHYK-PYADKGHLARYLDDPHGPV-EFIAGDV 77 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A++ D + + AA + S ++ TN++GT + E R Sbjct: 78 GDAGRVMDAVEGC--DTVFHLAALIGIPYSYDSPGAYVRTNVVGTENIAEACR------- 128 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R L ST EVYG+ ED P P SPYSA+K +D + L+ H + +PV Sbjct: 129 --RHSVRRLLHTSTSEVYGTALTAPIGEDHPLQPQSPYSASKIGADMMALSHWHAFELPV 186 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP + ++ G+ G RD+ YV D + Sbjct: 187 TVVRPFNTYGPRQSARAVIPAILAQLHSGAREIRLGSLTPTRDFTYVTDTAAGFLALAGC 246 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHD--RRYA 295 R +GE N+G E +G L ALI S E+ + RP R Sbjct: 247 DRALGESVNLGTGRE-------ISVGDLAKALIAASGRDAEIVVDPARLRPSGSEVHRLL 299 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D+++ ++ GW P+ +E GL +T W D+ + P Sbjct: 300 SDNTRARTWAGWEPEVGLEEGLERTSAWVADHLHLFAP 337 >gi|313675758|ref|YP_004053754.1| nad-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] gi|312942456|gb|ADR21646.1| NAD-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] Length = 320 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 30/332 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++I+TGGAGFIGS L +ND +++ V VID L+ G ++++E F F + DIC Sbjct: 5 KIIITGGAGFIGSNLVEKYLNDDRVEKVRVIDNLS-NGYYSNIEEFESHPKFEFFKEDIC 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F D I + AA V RSI + NI GT +L ++ + Q Sbjct: 64 DYDKMLELTGGF--DLISHQAALGSVPRSIENPMQSTKVNIDGTVNIL------YAAV-Q 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K D R + + YG ED+ NP SPY+ TK + + + TYG+ + Sbjct: 115 NKID--RVVLACSSSTYGDSPSLPKQEDIIGNPLSPYAVTKYAVELYAEVFQKTYGLNYV 172 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP P+ +IP+ I G+ + GDG+ RD+ +VE+ V A L Sbjct: 173 GLRYFNIFGPRQNPDNPYAAVIPIFCKAFIHGNEPTINGDGETSRDFTFVENAVHANDLA 232 Query: 237 L---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDR 292 L K + + YN+ ++ D+ IG L + S +L + +RPG + Sbjct: 233 LFTENKQALNQIYNVACGDQMSLNDM---IGLL------QELSGIDLKPNYGPERPGDVK 283 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SKI++ +G+ PQ + GL K WY Sbjct: 284 HSKADISKIENLLGYKPQVRFKEGLGKVYGWY 315 >gi|305431627|ref|ZP_07400797.1| NAD-dependent epimerase/dehydratase [Campylobacter coli JV20] gi|304445326|gb|EFM37969.1| NAD-dependent epimerase/dehydratase [Campylobacter coli JV20] Length = 322 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 3 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 59 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 110 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 168 NIARPFNTYGPRQSARAIIPTIITQILSGTKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 228 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 278 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 311 >gi|218562930|ref|YP_002344709.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|31324512|gb|AAM76273.1| Cj1319-like protein [Campylobacter coli] gi|112360636|emb|CAL35433.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 323 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 169 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 312 >gi|57238370|ref|YP_179498.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni RM1221] gi|88596043|ref|ZP_01099280.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|57167174|gb|AAW35953.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni RM1221] gi|88190884|gb|EAQ94856.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 84-25] Length = 323 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 169 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEYSMQEVLNLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 312 >gi|301168321|emb|CBW27911.1| UDP-glucose 4-epimerase [Bacteriovorax marinus SJ] Length = 331 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 30/321 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS LC L+N +V+ D L G + +++ + + F F++ I Sbjct: 1 MKVLVTGGAGFIGSHLCSELIN-CGDEVICYDNLE-DGQIQNIQHLINNEKFKFIEETIL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + + D I + A ++ + S+ + N+ G+F ++E R Sbjct: 59 NFEALLES--SVDVDVIYHLAGKADIVPSVNNPKLYFDVNVTGSFNVIEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ++ YG +D+ +E +P PY+ TK + +L WG YGI V Sbjct: 109 -ANNIKRVVYAASSSCYGLVDEYPTTETCALSPEYPYAQTKLMGESCLLHWGKVYGIEVN 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP ++ + + + + + G G+ VRD++YV D +A Sbjct: 168 SLRLFNVYGPRSRTNGAYGSVMGVFLAQKLASKKFTVVGSGEQVRDFVYVGDVAKAFMKA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K + GE NI NN + +V LLD + FI RPG R Sbjct: 228 GKCKKFGEIINIATNNPQSINHLV----SLLDGY---------GVEFIPKRPGEPDRTQG 274 Query: 297 DSSKIKSEIGWFPQENMESGL 317 DS+K K +GW + E G+ Sbjct: 275 DSTKAKEILGWSAETTFEEGV 295 >gi|312137032|ref|YP_004004369.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] gi|311224751|gb|ADP77607.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] Length = 314 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGFIGS L + + +VL +D GN ++K++ +S F F ++DI Sbjct: 1 MRILITGVAGFIGSHLAERFIKEGH-KVLGVDNFI-TGNFRNIKKLVKSPNFKFKKLDIS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +F D +++FA+ + E + GTF + L+ Sbjct: 59 KKTI------DFDADIVMHFASPASPVDYYRYPLETLKAGSYGTF----------NTLNI 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +K+ R++ ST EVYG + E P P + Y K ++ A+ + Sbjct: 103 ARKNDARYILASTSEVYGDPEVHPQKESYWGNVNPIGPRAVYDEAKRFAEATTAAYHREF 162 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP P+ ++IP IT+ ++G + +YGDG R + Y++D V + Sbjct: 163 GLDTRIIRIFNTYGPRMKPDDGRVIPNFITQALKGEKITVYGDGTQTRSFCYIDDLVEGI 222 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 Y L +K GE N+G E + ID+ I L+ + +Y + +D P + Sbjct: 223 YRLSIKDNLDGEVVNLGNPEEYRIIDLAKLIIDLVGKDLEITYK-----KLPKDDP---K 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K K IGW P+ ++ GL KT+ ++ Sbjct: 275 RRRPDITKAKKLIGWEPKTPLKIGLKKTIKYF 306 >gi|160945676|ref|ZP_02092902.1| hypothetical protein FAEPRAM212_03207 [Faecalibacterium prausnitzii M21/2] gi|158443407|gb|EDP20412.1| hypothetical protein FAEPRAM212_03207 [Faecalibacterium prausnitzii M21/2] Length = 343 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 35/345 (10%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQV 57 + +TG +GFIGS L R L + +V+ +D + ++ L E+ + ++F++ Sbjct: 5 VFITGASGFIGSNLAKRILTTEPDTKVIGLDNMNDYYDVRIKEARLAELQKFENYTFIKG 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ D+ I S +++ PD +VN A++ V SI D +I +N+IG + +LE +C Sbjct: 65 NLADKALINSIFEQYHPDIVVNLGAQAGVRYSITNPDAYIESNMIGFYNILE------AC 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 119 RHHPVE---HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYN 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ +++ G + ++ G RD+ YV+D V + V Sbjct: 176 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLVNGETIKIFNYGNCKRDFTYVDDIVEGVVRV 235 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHTE 279 + + R GE YNIG +N +D V + ++P Y +H E Sbjct: 236 MARAPEKRNGEDGLPIPPYAVYNIGNSNPENLLDFVQILSEELVRAGVLPADYDFEAHKE 295 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D+ ++ + G+ P + GL K WY Sbjct: 296 LVPM---QPGDVPVTFADTEPLERDFGFKPHTPLREGLRKFAEWY 337 >gi|205356823|ref|ZP_03223580.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345315|gb|EDZ31961.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni CG8421] Length = 321 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 2 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 58 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 109 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 166 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 167 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 226 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 227 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 276 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 277 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 310 >gi|283778335|ref|YP_003369090.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068] gi|283436788|gb|ADB15230.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068] Length = 328 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 106/353 (30%), Positives = 154/353 (43%), Gaps = 46/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID----------KLTYAGNLNSLKEISQSN 50 M +++TGGAGFIGS L L+ +++V+D K A +L +L S Sbjct: 1 MAVLITGGAGFIGSHLVELLLAKTSHRLVVVDNFDPYYSPIVKRNIAAHLAAL-----SP 55 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 + D D ++ L+E +IV+ AA V S+ + + NI T +LLE Sbjct: 56 RITIANADCLDAVALKKLLEEHAVRSIVHLAASPGVPASLRDPRQCLRNNIEATLVLLEL 115 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVL 169 R Q + +QF F ST VYGS F+ED P NP SPY +K +++ L Sbjct: 116 AR-------QHRVEQFLFASSST--VYGSGAAAPFAEDAPMGNPVSPYGVSKRAAEQLGF 166 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVED 228 + H Y IP + N YG PE L A TR I G + L+GDG +RD+ +V D Sbjct: 167 NYHHLYQIPFVSLRFFNAYGIRIRPE-LALAAFTRAILRGEPLKLFGDGSALRDFTHVTD 225 Query: 229 HVRALYLVLKKGRI-----GERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTEL 280 + L L+ GE +N+G R+ ID++ E ALI + S TE Sbjct: 226 IAQGLLQTLEHPHFATAVAGEAFNLGSCAPITVRQLIDMI-EAAAGRRALIEQLPSRTED 284 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + R K +G+ P +E + + V W L RP Sbjct: 285 M----------LRTHASLEKSARVLGYQPTRQIEIEVPRYVAWALQEESAGRP 327 >gi|242372200|ref|ZP_04817774.1| UDP-glucose 4-epimerase [Staphylococcus epidermidis M23864:W1] gi|242350139|gb|EES41740.1| UDP-glucose 4-epimerase [Staphylococcus epidermidis M23864:W1] Length = 313 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 39/335 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS + L N+ ++V VID L+ G L ++ I + + F DI Sbjct: 1 MKALITGGAGFIGSHISERLTNE-GVEVHVIDNLS-TGRLENIHFIPKEH---FYLKDIT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +K+ Q D I + AA V +I TNI T LLE TR W S + Sbjct: 56 DVTFVSELIKKEQFDYIFHLAAMVSVVETIEKPVISNETNINATINLLEATRKWDSQIK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSSPYSATKASSDYLVLAWGH 173 +F+ S+ VYG L D+P + P SPY+ K S + + H Sbjct: 115 ------KFIFASSAAVYGDL------PDLPKSTINSKVAPLSPYAIQKFSGEQYAHIYHH 162 Query: 174 TYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 Y +P + N YGP P ++ + + I YGDG+ RD++Y++D Sbjct: 163 LYNVPTVCLRFFNVYGPKQNPNSDYSGVLSILNAKFINKEQFTFYGDGEQTRDFVYIDDL 222 Query: 230 VRALYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V A++ VL K G +N+G +E +++ VF+ K + +T + E R Sbjct: 223 VSAIWTVLYSKDTNGGIFNVGAGSET-SLNTVFK-------SFEKVFGYTIPHIYKECRI 274 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G + D + +K +G+ PQ N+ SG+N V + Sbjct: 275 GDIKHSYADITPLK-RLGYSPQFNIHSGINAYVSY 308 >gi|239904650|ref|YP_002951388.1| putative UDP-glucuronate 5'-epimerase [Desulfovibrio magneticus RS-1] gi|239794513|dbj|BAH73502.1| putative UDP-glucuronate 5'-epimerase [Desulfovibrio magneticus RS-1] Length = 335 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE----ISQSNLFSFLQ 56 M ++VTG AGFIG LCR ++ + V +D L ++ KE +S F F++ Sbjct: 1 MNILVTGAAGFIGFHLCRRFLS-MGFHVTGLDNLNPYYSVALKKERIALLSADAKFRFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR + + +VN AA++ V S+ +++I NIIG F +LE R Sbjct: 60 EDMGDRASMDRLFDAGGFNYVVNLAAQAGVRHSLKCPEDYINANIIGYFNILENCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q K D F F S+ VYG K FS D +P S Y+A+K S++ + ++ + + Sbjct: 116 ---QHKVDHFVF--ASSSSVYGLNTKMPFSVHDNVDHPISLYAASKKSNELMAHSYSYLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L +IEG+ + ++ GQ RD+ Y++D V + Sbjct: 171 GLPCTGLRFFTVYGPWGRPDMALFLFTKAIIEGNPIQVFNHGQMERDFTYIDDIVEGVVR 230 Query: 236 VLKK------------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V + + YNIG NN + + I ++ Sbjct: 231 VTQNIPKPNPDWNPASPDPSSSVSPYKLYNIGNNNSVTLLQFI--------EAIEEALGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG D + ++G+ P N+++G+ + WY D Sbjct: 283 EAIKEFLPLQPGDVPATCADIDDLIKDVGFKPATNIKTGIANFIAWYRD 331 >gi|150019522|ref|YP_001311776.1| NAD-dependent epimerase/dehydratase [Clostridium beijerinckii NCIMB 8052] gi|149905987|gb|ABR36820.1| NAD-dependent epimerase/dehydratase [Clostridium beijerinckii NCIMB 8052] Length = 320 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 170/330 (51%), Gaps = 28/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++ +TGGAGFIG+ LC L ++ ++L+ D L ++ + K +++ N+ ++ DI + Sbjct: 6 KIFLTGGAGFIGTKLCEKLSSNN--ELLIYDNLK-RNSIKNTKLLNKDNI-KLVKGDILN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + EF+P+ +++ AA + +D I + N+IGT+ +LE + + Sbjct: 62 FNFLKHVIDEFKPNIVIHLAAIAGIDTVIKNPVSTMKVNMIGTYNILEALK--------N 113 Query: 122 KKDQFRFLQISTDEVYGS----LDKGLFSEDMPYNPSS-PYSATKASSDYLVLAWGHTYG 176 +K + F+ ST E++GS +D+ + P + YS +K + ++L ++ YG Sbjct: 114 QKIEI-FIDFSTSEIFGSYAYKVDEAHTTNLAPVGEARWTYSVSKLAGEHLAYSFYKEYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P++ N YG E I + R I+ + ++G+G +R W Y++D + + L Sbjct: 173 LPIVTIRPFNIYGDGQVGEGAIHQFVVRAIKNEQIQIHGEGNQIRSWCYIDDFITGVMLC 232 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDRPGHDRRY 294 L + IG+ +NIG N R I I +L LI + + S +E++ ++ + R Sbjct: 233 LDNEKAIGQAFNIG--NPRGTITIA-----MLAKLIKRIAKSKSEIVYVPKNYVDIELR- 284 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K K + + P+ +++ GL +T+ WY Sbjct: 285 SPSIEKAKEILKFVPKYDLDEGLERTIKWY 314 >gi|57168235|ref|ZP_00367374.1| probable nucleotide sugar dehydratase Cj1319 [Campylobacter coli RM2228] gi|57020609|gb|EAL57278.1| probable nucleotide sugar dehydratase Cj1319 [Campylobacter coli RM2228] Length = 330 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 11 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 67 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 118 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 175 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 176 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 235 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 236 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 285 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 286 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 319 >gi|169627607|ref|YP_001701256.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium abscessus ATCC 19977] gi|169239574|emb|CAM60602.1| Probable UDP-glucose 4-epimerase GalE1 [Mycobacterium abscessus] Length = 310 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTG AGFIGS L L+ D +V +D L G + +L+ + F+F++ DI Sbjct: 1 MRAMVTGAAGFIGSTLVDRLLADGH-EVTGLDNLA-TGKVANLEAAEANAKFTFVKDDIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + + + E+ P+ I + AA+ V S+ + N++GT L E R Sbjct: 59 EAD-LDAVVAEYSPEVIFHLAAQIDVRHSVADPQFDSSVNVVGTVRLAEAAR-------- 109 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + S+ +YG+ + SE +P +P SPY+A K + + + + H YG+ Sbjct: 110 -KAGVRKIVHTSSGGSIYGTPKQIPTSETVPTDPHSPYAAGKVAGEIYLNTFRHLYGLEC 168 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A Sbjct: 169 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGRSTKVFGDGGNTRDYVFVDDVVEAFVRA 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+N+G E + L +L+ + + F R G R+ + Sbjct: 229 SGPDGGGQRFNVGTGVETSDRQ--------LHSLVAAAAGAPDDPEFHPPRLGDLRQSCL 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K +GW P+ + G+ +TV ++ Sbjct: 281 DVGLAKRVLGWEPRVPLADGIRRTVDFF 308 >gi|254785444|ref|YP_003072873.1| NAD-dependent epimerase/dehydratase [Teredinibacter turnerae T7901] gi|237685928|gb|ACR13192.1| NAD-dependent epimerase/dehydratase [Teredinibacter turnerae T7901] Length = 332 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 146/334 (43%), Gaps = 35/334 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSFLQV 57 +R++VTG GFIGS +LV L Q + L +LN L+++ + Sbjct: 8 VRVLVTGADGFIGS----HLVERLLQQGYKVRALAQYNSLNHWGWLEDVPAHPHLEIITG 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D C R ++ + + AA + S +I TN+ GT + C Sbjct: 64 DILDATCCREITRDIH--TVFHLAALIAIPFSYRAPSRYIETNVTGTLNM---------C 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + RFLQ ST EVYG+ E P SPYSA+K +D L ++ ++ + Sbjct: 113 QAALDQGVVRFLQTSTSEVYGTAQYVPIDEAHPLQAQSPYSASKIGADALATSFHRSFEL 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 P+ + N YGP +IP IT++ G+ GD RD+ +V D + L Sbjct: 173 PLTIVRPFNTYGPRQSARAVIPTIITQIAAGAESIQLGDLSPTRDFSFVTDTCDGFIALA 232 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR 292 IGE N+G N E D + +I ++ + ++F+ D RP Sbjct: 233 NCPQAIGETVNVGSNFEISVADTLEKIREIMGS----------NVKFMTDQARLRPSASE 282 Query: 293 --RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+SK ++ G P+ +++ GL T+ W+ Sbjct: 283 VMRLWCDNSKYRALTGKQPEFSIDDGLRATIEWF 316 >gi|258517083|ref|YP_003193305.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257780788|gb|ACV64682.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 345 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 165/342 (48%), Gaps = 37/342 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLFSFL 55 ++TG AGFIG L + L+ + +V+ ID KL YA L LK Q F+F+ Sbjct: 17 LITGAAGFIGFFLSKRLL-EQGCRVIGIDNINDYYDVKLKYA-RLEQLKLFEQ---FTFV 71 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D++ I +E++P+ +VN AA++ V S+ D +I +NIIG F +LE R + Sbjct: 72 EGDISDKDVITGTFQEYRPNIVVNLAAQAGVRYSLENPDAYIQSNIIGFFNILEACR--Y 129 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 S + + S+ VYGS K F E D +P S Y+ATK S++ + + H Sbjct: 130 SPVDH-------LVYASSSSVYGSNKKVPFEESDFVDHPVSLYAATKKSNELMAHTYSHL 182 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN--VRDWLYVEDHV 230 Y IP YGP P+ R G + ++ GD +N RD+ Y++D V Sbjct: 183 YKIPSTGLRFFTVYGPMGRPDMAYFGFTQRYFAGEPIRIFNNGDFENDLYRDFTYIDDIV 242 Query: 231 RALYLVLKKGR----IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 + +L K + +NI GNN + + + E L+ + KS + I + Sbjct: 243 EGIERLLCKAPDKTVPHKVFNI-GNNSPEKLMVFIET---LEKCLSKSAGREIVFNKIYE 298 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG D+ ++ +G+ P+ ++E GL + WY++ Sbjct: 299 PIKPGDVPATYADTGLLQEAVGFKPETSIEEGLQRFADWYVE 340 >gi|86150012|ref|ZP_01068240.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839458|gb|EAQ56719.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 330 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 11 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 67 RDSFFCEKITKNI--DAIFHLGALIAIPYSYAAPQSYVDTNVNGTLNMLEAAK------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 118 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 175 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 176 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 235 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 236 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRFRPKNSEVFR 285 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 286 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 319 >gi|219849628|ref|YP_002464061.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543887|gb|ACL25625.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 339 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 102/355 (28%), Positives = 163/355 (45%), Gaps = 49/355 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 M ++TGGAGFIG L YL+ + QV ++D L+ NL L+E + F+Q Sbjct: 1 MTHLITGGAGFIGCNLADYLLRHGE-QVTIVDNLSRPRTPLNLAWLQE-RYGDQLRFVQA 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D +++ + + + + A + V S+ N +GT +LE RL Sbjct: 59 DIRDAAAMQAVIPGHR--VVYHLAGQVAVTTSVQDPRSDFEINALGTLNILEAARL---- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--------YNPSSPYSATK 161 + F ST++VYG ++ E D+P + SPY +K Sbjct: 113 ---APEPPIVFFS-STNKVYGGMETVAVVEEETRYRYRDLPNGVPEHQLLDFHSPYGCSK 168 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDG 217 ++D V + YG+ ++ S YGP F + AI ++E + +YGDG Sbjct: 169 GAADQYVRDYARIYGLKTVVFRQSCIYGPRQFGVEDQGWAAHFAIAALLE-RPITIYGDG 227 Query: 218 QNVRDWLYVEDHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 + VRD LYV+D + A L++ GRI YNIGG + + I E G +L L+ Sbjct: 228 KQVRDMLYVDDLIAAYMAALERIDRVSGRI---YNIGGGPQ-NALSIWAEFGPVLSRLVG 283 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ +R+ + RPG Y D + K E+GW P+ ++ G+ + V W DN Sbjct: 284 RAIE----VRYGDWRPGDQPVYISDIALAKQELGWEPRISVYEGIERMVSWIRDN 334 >gi|254380716|ref|ZP_04996082.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. Mg1] gi|194339627|gb|EDX20593.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. Mg1] Length = 331 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 144/337 (42%), Gaps = 25/337 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSN-LFSFLQVDIC 60 ++VTG GFIGS L LV+ +++ V K YA + + ++ + D+ Sbjct: 9 VLVTGAEGFIGSTLVDLLVSRGARVRAFVHYK-PYAEKGHLARYLADPDGPVEMWTGDVR 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ D + + AA + S ++ TN+ GT + E R Sbjct: 68 DAGRVSDAVAGC--DTVFHLAALIGIPYSYASPGAYVQTNVTGTQNVAEACR-------- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST EVYG+ SE P P SPYSA+K +D + L++ H + +PV Sbjct: 118 -RHGVRRLVHTSTSEVYGTALTAPISESHPLQPQSPYSASKIGADMMALSFHHAFELPVT 176 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP +IP + ++ GS G RD+ YV D V + Sbjct: 177 VVRPFNTYGPRQSARAVIPTILAQLHAGSREIRLGSLTPTRDFTYVTDTAEGFLAVAECD 236 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRPGHD--RRYAI 296 R +GE N+G E +G L +ALI S + ++ RP +R Sbjct: 237 RALGEVVNLGTGEE-------ISVGALAEALIAASGREAKVVVDPTRLRPSGSEVQRLLS 289 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D+S+ + GW P+ +E GL T W N + P Sbjct: 290 DNSRAREWAGWRPRVGLEEGLRHTSAWIAANQSLFAP 326 >gi|219116705|ref|XP_002179147.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409038|gb|EEC48970.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] Length = 593 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 24/344 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLV------IDKLTYAGNLNSLKEISQSNLFSFLQ 56 +++TG AGFIGS + L+ +LV D NL L+E S + Sbjct: 111 VLLTGAAGFIGSHVAEGLLARGDTVILVDEVNDYYDVRIKESNLQLLQETFGSARLRIYR 170 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ + I +P+ + + AA + V SI ++ +NI+GT LLE +R++ Sbjct: 171 GDLANASFISRVFAREKPEWVCHLAARAGVRPSIQNPYVYLNSNIVGTMRLLELSRIY-- 228 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + F+ S+ VYG LFSED + P SPY+ATK S + + + H Y Sbjct: 229 -------NIQNFVFASSSSVYGGSQSTLFSEDERVDRPISPYAATKKSCELMAYTYHHLY 281 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV YGP P+ + R+ G + +GDG + RD+ Y+ D V + Sbjct: 282 GLPVTALRFFTVYGPRGRPDMAPFKFVDRVSRGLPLQQFGDGSSSRDYTYISDIVDGVVR 341 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + + + N+G + K I+ + L+ K I+++ D+ G Sbjct: 342 AIDRPYDYQILNLGKGSGTKLIEFI--------KLVQKYTGKNATIQYLPDQAGDVPYTC 393 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 D K + +G+ P+ + E G+ TV W+ + + KE K Sbjct: 394 ADVRKAEHFLGYKPKVSFEEGIRLTVEWFSKTYVPQQSVKKETK 437 >gi|115523535|ref|YP_780446.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisA53] gi|115517482|gb|ABJ05466.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisA53] Length = 330 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/257 (31%), Positives = 126/257 (49%), Gaps = 20/257 (7%) Query: 74 PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQF-RFLQIS 132 P+ IVNFAA+ S + F TN + L EE K+D RF+QI Sbjct: 77 PEIIVNFAAQGEGAVSWKHSWRFFETNSMALSRLTEELM---------KRDWLERFIQIG 127 Query: 133 TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYH 192 T E+YGS++ +ED P P+SPY+A+K + D + + P+ + SN Y P Sbjct: 128 TSEMYGSVNHAT-NEDEPIKPTSPYAASKVAFDMYLESVAKFLKFPMNIIRPSNAYCPGQ 186 Query: 193 FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNN 252 ++IP AI + G+ + L+G G+ + +++ D RA+++V +K +G YN G Sbjct: 187 LLHRVIPKAIWCGLTGNKLPLHGGGRAEKSYIHARDLGRAIHMVAEKAPLGVIYNAGPAL 246 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 ++V L +L DR G D RY +DSS+IK+E+GW PQ Sbjct: 247 PTSIREVVERTAGAL------GMPFEQLCEVTGDRLGQDSRYWLDSSRIKNELGWEPQIG 300 Query: 313 MESGLNKTVCW---YLD 326 + GL + V W Y+D Sbjct: 301 WDEGLAEMVDWGRKYID 317 >gi|108805895|ref|YP_645832.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108767138|gb|ABG06020.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 306 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 29/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + L++ +V V+D NL++ K + F + D+ Sbjct: 1 MRVLVTGGAGFIGSHVAEQLLSRGH-EVAVLD------NLSTGKRENVPPGARFYEADV- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ ++F+P+A+ + AA+ V RS+ D N+IGT LLE +C+ Sbjct: 53 -RDGCAGVFEDFRPEAVSHQAAQMDVRRSVAEPDFDAEVNVIGTVRLLE------ACVRG 105 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST +YG ++ +E P P SPY +K + + + + YG+P Sbjct: 106 GVR---RVVFASTGGAIYGEQEEFPATERHPQYPISPYGVSKLAGERYLHYYNAQYGLPY 162 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 SN YGP P ++ + R+ G + G G+ RD++YV D RA L Sbjct: 163 AALRYSNVYGPRQDPHGEAGVVAIFCGRLAAGERATINGTGEQTRDYVYVGDVARANVLA 222 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ YNIG E +++ ++E L H +PG +R + Sbjct: 223 LENELPPGAYNIGTGVE-TSVNELYERLRRLSGRDDLDPEHGPA------KPGEQQRSCV 275 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S +GW P+ +++GL +T+ ++ Sbjct: 276 DPSLAGRVMGWRPEVGLDAGLKETLRFF 303 >gi|257052215|ref|YP_003130048.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690978|gb|ACV11315.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 328 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 153/347 (44%), Gaps = 30/347 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNL------ 51 M+++VTGGAGFIG L V D V+V+D YA + EI + Sbjct: 1 MQILVTGGAGFIGGHLAERFVADGH-DVVVLDNFDPFYAREIKEHTVEICRDTAADGDGS 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + ++ D+ D + + + E D + + AA++ V RS+ ++ N+ GT +L+ Sbjct: 60 YELVEGDVRDADLVAELVAE--ADYVYHEAAQAGVRRSVENPRKYDAVNVDGTLNVLDAA 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + R + S+ VYG + E+ P P SPY A+K + + A+ Sbjct: 118 R---------EHGIERVVVASSSSVYGKPISLPYDEEDPTMPVSPYGASKLAQERYTCAY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + Y +P + YGP P I ++R I +YGDG +RD+ Y+ED V Sbjct: 169 ANCYDLPAVALRYFTVYGPRMRPNMAISNFVSRAINDEAPVVYGDGSQIRDFTYIEDIVE 228 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A + L+ GE NIG N EI L + + + EL + E Sbjct: 229 ANVRLLSTDAADGEAVNIGSNG-------TIEIKTLAEEIRDQLAPELEL-EYAERHDAD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D SK + +G+ P ++ G++K V WY N W+ PL +E Sbjct: 281 AEATHADVSKAAALLGYEPSTSIREGVSKFVEWYRANREWYEPLVRE 327 >gi|148269553|ref|YP_001244013.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1] gi|147735097|gb|ABQ46437.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1] Length = 309 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V+V+D L+ +G + +L + F + I Sbjct: 1 MNVLVTGGAGFIGSHVVDKLIEN-GYGVIVVDNLS-SGKVENLNRNAL-----FYEQSIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +P+ + + AA++ V S+ TNIIG+ +LLE++ Sbjct: 54 DEEMMERIFSLHRPEYVFHLAAQASVAISVREPVRDAETNIIGSLVLLEKS--------- 104 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K +F+ ST +YG K + E +P SPY K S + + + YG+ Sbjct: 105 IKHGVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLK 164 Query: 179 VLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + +N YGP P ++ + RM+ G V ++GDG+ VRD++YV+D VRA L Sbjct: 165 YTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLL 224 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++KG E +NI G ++ +F+ L+ + + + + R G R+ Sbjct: 225 AMEKGD-NEVFNI-GTGRGTTVNQLFK-------LLKEITGYDKEPVYKPPRKGDVRKSI 275 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +K K ++GW P+ +E GL TV ++ Sbjct: 276 LDYTKAKEKLGWEPKIPLEEGLKLTVEYF 304 >gi|225850891|ref|YP_002731125.1| VI polysaccharide biosynthesis protein VipB/tviC [Persephonella marina EX-H1] gi|225646058|gb|ACO04244.1| VI polysaccharide biosynthesis protein VipB/tviC [Persephonella marina EX-H1] Length = 314 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 34/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L L+ + V+V+D L+ G + +L S+ F++ DI Sbjct: 1 MAVLVTGGAGFIGSHLVEELIKKDQ-TVIVVDNLS-TGKIENL---PCSDKVIFIEGDIS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ ++ + D + + AA + V +S+ +E TN T LLE S Sbjct: 56 EKGFVKELFSFYSFDKVFHLAAVASVAKSVELPEETHRTNFDATLYLLES--------SI 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K ++F F S+ VYG L + EDMP P +PY+ K +S+ V+ YG+ Sbjct: 108 GKVNRFVFA--SSAAVYGDLLELPKREDMPVKPLTPYAVDKYASERYVVNAFRLYGLDST 165 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMI-----EGSHVFLYGDGQNVRDWLYVEDHVR 231 N +G P +I + I R+ E + + +YGDG+ RD++YV+D V+ Sbjct: 166 AVRFFNVFGERQDPSSPYSGVISIFIDRIKRYKNGEDTEIVIYGDGKQTRDFIYVKDVVK 225 Query: 232 ALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ + + GE +N+G + ++I+ + ++ L P +RF ++R G Sbjct: 226 ALILLSESRDSSGEVFNLGTGSSISLLEILDILKEIVGDLPP--------VRFEKERKGD 277 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + D SKIKS +G+ P+ +++ GL K Sbjct: 278 IKHSQADISKIKS-LGFSPEYSLKEGLEK 305 >gi|312112978|ref|YP_004010574.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311218107|gb|ADP69475.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 324 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 32/339 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIG + + L+ + V+ D + Y +L L+ ++ F+F++ Sbjct: 1 MTILVTGAAGFIGFHVAKALLARGE-AVVGFDNINSYYDPSLKHARLEHLAGERAFTFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +R F+P +V+ AA++ V S+ ++ +N+IG +LE R Sbjct: 60 ADLADADAVRDTFARFEPRRVVHLAAQAGVRYSLQNPQAYLDSNVIGLLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F S+ VYG K F+E D P+S Y ATK S + + A+ H + Sbjct: 116 ---AHRPEHLVF--ASSSSVYGLNTKLPFAEADKTDAPASLYGATKKSGELMAHAYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P+ YGP+ P+ + P+ T+ +IEG + L+ +G + RD+ Y++D V + Sbjct: 171 NLPMTGLRFFTVYGPWGRPD-MSPIIFTKAIIEGRPIDLFNNGDHARDFTYIDDIVDGVL 229 Query: 235 LVL-------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+ G E YNIG N D V A I + + + + Sbjct: 230 RVVDMTPVAGASGPAFEIYNIGHNEPVPLNDFV--------ACIEDAIGKKAIRNLLPMQ 281 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG D ++ + G+ P +E G+ + V WY D Sbjct: 282 PGDVPETHADIERLAAATGFRPTTPIEVGIPRFVRWYRD 320 >gi|288939982|ref|YP_003442222.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] gi|288895354|gb|ADC61190.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] Length = 328 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 32/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----------SQSN 50 ++++TGG GFIG++L L+ + I G+ L E+ +Q+ Sbjct: 4 KVLITGGCGFIGTSLIHKLLARYPTAHIRIVDNFVTGSPADLAEVCVFQSTQAADLAQAT 63 Query: 51 LFS---FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 L + L+ DI D + + + D IV+ AA + V S+ + N++GTF Sbjct: 64 LTAGVFLLEGDIRDADFLLQCAQGV--DCIVHLAANTGVGPSVEDPRLDMDCNVVGTFNA 121 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE RL RF+ S+ G ++ + E++P +P SPY A+K + + Sbjct: 122 LEAARL---------NGVKRFIFASSGAPAGEVEPPI-HEELPPHPVSPYGASKLAGEGY 171 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 A+ T+GI + N YGP + ++ I + ++G +YGDG RD+LY+ Sbjct: 172 CSAYYRTFGIETICLRFGNVYGPRSKKKSSVVAKFIRQALQGEPCIIYGDGTQTRDFLYI 231 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +D VRA+ L +++ GE + I ER V E+ LL + K +H + I+ Sbjct: 232 DDLVRAVMLAMEQPVGGETFQIATGMERT----VGEVATLLAKALEKRGTHMD-IQHDSP 286 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R G RR D+SK + W + + G+ +T+ W+ + Sbjct: 287 RLGDVRRNFSDTSKAARLLEWRTEVEVPEGIERTLDWFFEQ 327 >gi|108758844|ref|YP_629891.1| CDP-tyvelose-2-epimerase [Myxococcus xanthus DK 1622] gi|108462724|gb|ABF87909.1| CDP-tyvelose-2-epimerase [Myxococcus xanthus DK 1622] Length = 366 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 43/348 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQVDI 59 R ++ GGAGFIGS L + ++ + V V+D LT G +++L+ + + D+ Sbjct: 13 RTVIFGGAGFIGSNLADHYLSAGRT-VRVVDNLTRPGVVHNLRWLQARHGARLEVVTADV 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++ ++ + +FAA+ V S+ N GT +LE R + Sbjct: 72 RDAHAVKQSV--VGASEVFHFAAQGAVTTSLETPVTDFEVNAGGTLNVLEALR------A 123 Query: 120 QDKKDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSAT 160 ++ F ST++VYG D GL ED P + SP + Sbjct: 124 MERPASLVF--TSTNKVYGCTPGVEFVQKPSRYAPRDAGLRGHGVGEDCPVDFESPDGCS 181 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K ++D VL + YG+ ++ S YGP F + + + M+EG + LYGDG Sbjct: 182 KGAADQYVLDYARAYGLRTVVFRMSCIYGPRQFGTEDQGWVAHFLLCMLEGRPLTLYGDG 241 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + VRD L V D VRAL L + GR+ G+ +NIGG R + ++ +G LI + Sbjct: 242 KQVRDILDVGDLVRALGLAQQHIGRLKGQAFNIGGGPSR-TVSLLDLLG-----LISQRT 295 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++F + R G R Y D K ++ GW PQ + G+++ W Sbjct: 296 GLRPALQFEDGRTGDPRYYVSDPRKFQAATGWAPQVGIAEGVDRLHDW 343 >gi|296270880|ref|YP_003653512.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] gi|296093667|gb|ADG89619.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] Length = 303 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 87/326 (26%), Positives = 144/326 (44%), Gaps = 30/326 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L L+ D +VLV+D L+ + N E+ + +D+ Sbjct: 1 MRALVTGGAGFIGSNLVDRLLADGH-EVLVVDDLSSGRHRNPAAELHE--------IDVR 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ ++P+ I + AA+ V +S+ N+ GT +LE R Sbjct: 52 D-PALQDLAARWRPEVICHLAAQISVRKSVADPVHDARVNVEGTINVLEAAR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + S+ VYG + D +P SPY+A+K + + + YG+ Sbjct: 103 -RSGARKVVYASSVAVYGRPKELPVPGDATPDPRSPYAASKLGGELYLATYRALYGLEYT 161 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN YGP PE ++ + ++ G +YGDG RD+++V D V A Sbjct: 162 TLVLSNVYGPRQSPEGEAGVVAIFTDALLNGKPTVVYGDGTQTRDYVFVADVVDAFARAC 221 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G R+NIG + + + L +L+ + + RF R G A+D Sbjct: 222 GPDGDGRRFNIGTGVQTTDRE--------LHSLVAAAAGVPDEPRFAPPRLGDLPAMAVD 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 +GW P+ ++ +G+ TV W Sbjct: 274 PGPAFDGLGWRPRYDLPTGIKITVDW 299 >gi|197105699|ref|YP_002131076.1| NAD-dependent epimerase/dehydratase family protein [Phenylobacterium zucineum HLK1] gi|196479119|gb|ACG78647.1| NAD-dependent epimerase/dehydratase family protein [Phenylobacterium zucineum HLK1] Length = 338 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 50/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIG L R L+ + QV+ +D L Y +L + L + + + Sbjct: 1 MAILVTGSAGFIGFHLSRRLLQRGE-QVIGVDNLNAYYDPSLKAARLALLEAEAGYRHAR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + +E +PD +VN AA++ V S+ + +N++G +LE Sbjct: 60 IDLADREAMAALFEETRPDGVVNLAAQAGVRYSLENPAAYADSNVVGFLNVLE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + + + ST VYG+ K FS D +P + Y+ATK +++ + A+ H + Sbjct: 114 CRAVQPR---HLVYASTSSVYGANGKLPFSVHDHAVHPITLYAATKLANEAMAHAYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ ++ ++EG + +YG G+ RD+ YV+D V + Sbjct: 171 GVPCTGLRFFTVYGPWGRPDMSPFKFLSAILEGRPIDVYGQGRMQRDFTYVDDIVDGVIA 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDI-------VFEIGFLLDALIPKSYSHTELIRFIED-- 286 L + + N + +R + ++ IG + EL+R+IE Sbjct: 231 ALDR---PAQANPEWDPQRPDPASSGVAPWRIYNIG---------ASEPVELMRYIETFE 278 Query: 287 --------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG A D S+ ++G+ P ++E G+ + V WYLD Sbjct: 279 RKLGCKAKLNLMPMQPGDVVSTAADVSETVRDLGYRPTTSIEEGVGRFVDWYLD 332 >gi|113374877|gb|ABI34795.1| UDP-glucose 4'-epimerase [Thermus aquaticus] Length = 311 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 35/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + L+ + ++V V+D NL++ K + F QVD+ Sbjct: 1 MRVLVTGGAGFIGSHIAEALLRE-GLEVAVLD------NLSTGKRENVPPGVPFYQVDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +EF+P + + AA++ V S+ N++G LLE R + Sbjct: 54 DGEGVERVFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACR-------R 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ F + +YG + +G +E+ P P SPY+A+KA+ + + A+G YG+ Sbjct: 107 HGVEKLVFAS-TGGAIYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLKW 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHVR 231 + N YGP P ++ + R+++G V LY GD VRD++YV D Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGEPVTLYARRTPGDEGCVRDYVYVGDVAE 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L L + YN+G ++++ + ++ T +R RPG Sbjct: 226 AHTLALLS--LEGVYNVGTGEGHTTLEVL--------KAVAEAALRTPEVRHAPPRPGDL 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + K+ + GW P+ G+ TV Sbjct: 276 ERSVLPPLKLMAH-GWRPRVGFREGIRLTV 304 >gi|160879360|ref|YP_001558328.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] gi|160428026|gb|ABX41589.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] Length = 337 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 38/337 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLFSFL 55 +VTG AGFIG L + L+ D V+ D K YA L + + N F+F+ Sbjct: 15 LVTGTAGFIGFHLAKMLL-DQGATVVGYDNINDYYDTKFKYA----RLNILEKYNNFTFM 69 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D++ I E +P +VN AA++ V SI + +I +NIIG F +LE R + Sbjct: 70 KGDLADKQAIDKLFIECKPQIVVNLAAQAGVRYSIEKPETYINSNIIGFFNILEACRHYG 129 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG+ K FS D P S Y+ATK S++ + + H Sbjct: 130 VE---------HLIFASSSSVYGANQKVPFSTYDKTDTPVSLYAATKKSNELMAYPYSHL 180 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGPY P+ ++E + ++ +G RD+ Y++D V+ + Sbjct: 181 YGIPTTGLRFFTVYGPYGRPDMAYFSFTKSIMESKPIKIFNNGDMYRDFTYIDDIVKGIE 240 Query: 235 LVL------KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 +L + +I + YNIG N K +D + L+ K + ++ + Sbjct: 241 QILCNPPEQDENKIKYKIYNIGNNKPVKLMDCI--------ELLEKYIGKKAIKEYLPMQ 292 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D ++ + + P ++E+GL+ V WY Sbjct: 293 LGEVYQTYADLCDLEEDFHFIPSTSIETGLSNFVEWY 329 >gi|261880328|ref|ZP_06006755.1| UDP-glucuronate 5'-epimerase [Prevotella bergensis DSM 17361] gi|270333019|gb|EFA43805.1| UDP-glucuronate 5'-epimerase [Prevotella bergensis DSM 17361] Length = 346 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-------------------TYAGNLN 41 M+++VTG AGFIG+AL + L+ + +V+ ID + + A + Sbjct: 1 MKILVTGAAGFIGAALVKALIGK-QHEVVGIDNINSYYDPALKYARLADVGIPSTAIAEH 59 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 S+ E ++S+L+ F+++D+ DR +++ D + N A ++ V SI ++ +NI Sbjct: 60 SMVESTRSSLYRFMKMDLTDRTAMKALFASEGFDIVFNLAGQAGVRYSIENPFAYVESNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 G +LE SC K + S+ +YG ++ +SE DM +P S Y+AT Sbjct: 120 FGFLNILE------SCRHHPVK---HLVYASSSSIYGMNNRVPYSETDMTDSPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS--HVFLYGDGQ 218 K S++ + A+ YGIP YGP+ P+ L + +++ + HVF +GD Q Sbjct: 171 KKSNELMAHAYSKLYGIPATGLRFFTVYGPWGRPDMAPSLFMKSVLDDTPIHVFNHGDMQ 230 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPK 273 RD+ Y++D V A+ LV GE YN+G ++ +D + +I + Sbjct: 231 --RDFTYIDDVVNAMLLVAGHPS-GETVPHTVYNVGHSSPVALMDFI--------RVIEE 279 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG D S+++ + G+ PQ +++ G++ WY D Sbjct: 280 ETGRKARLKMEPMQPGDVSCTYADISRLQHDFGFVPQVSVQQGIHAFYQWYKD 332 >gi|154685208|ref|YP_001420369.1| YfnG [Bacillus amyloliquefaciens FZB42] gi|154351059|gb|ABS73138.1| YfnG [Bacillus amyloliquefaciens FZB42] Length = 322 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L + L++ + LV D + + NL +++ Q N+ +Q + D Sbjct: 9 VFVTGCTGLLGSCLVKELIDQGANVTGLVRDTVPKS-NLYQGEQVKQMNI---VQGALED 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I AL E++ D + + AA++ V + NI+GT+ +LE R Sbjct: 65 LDVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRRHPLIK--- 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+D+ YG + E+MP PY +K+ +D L + +TYG+PV + Sbjct: 122 -----RVIVASSDKAYGDQPTLPYDENMPLQGKHPYDVSKSCADLLSHTYFNTYGLPVCI 176 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + C N YG ++IP I ++ G + DG +RD+ Y+ED V A L+ +K Sbjct: 177 TRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFIRDYFYIEDAVEAYLLLAEKM 236 Query: 241 R----IGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPGHDRRYA 295 GE +N + +++V +I +D+ L PK + ++ H+ ++ Sbjct: 237 EELNLAGEAFNFSNEIQLTVLELVEKILKAMDSDLKPK----------VLNQGSHEIKHQ 286 Query: 296 -IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W P ++ GL KT+ WY Sbjct: 287 YLSAEKARKLLNWTPAHTIDEGLEKTIEWY 316 >gi|295102850|emb|CBL00395.1| Nucleoside-diphosphate-sugar epimerases [Faecalibacterium prausnitzii L2-6] Length = 343 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 35/345 (10%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQV 57 + +TG +GFIGS L R L + +V+ +D + ++ L E+ + ++F++ Sbjct: 5 VFITGASGFIGSNLAKRILTTEPDTKVIGLDNMNDYYDVRIKEARLAELQKFENYTFIKG 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ D+ I S +++ PD +VN A++ V SI D +I +N+IG + +LE + Sbjct: 65 NLADKALINSIFEQYHPDIVVNLGAQAGVRYSITNPDAYIESNMIGFYNILEACHHYPVE 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 125 ---------HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYN 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ +++ G + ++ G RD+ YV+D V + V Sbjct: 176 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLVNGETIKIFNYGNCKRDFTYVDDIVEGVVRV 235 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHTE 279 + K + GE YNIG +N +D V + ++P Y +H E Sbjct: 236 MAKAPEKKNGEDGLPIPPYAVYNIGNSNPENLLDFVQILSEELVRAGVLPADYDFEAHKE 295 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D+ ++ + G+ P + GL K WY Sbjct: 296 LVPM---QPGDVPVTFADTEPLERDFGFKPHTPLREGLRKFAQWY 337 >gi|302875238|ref|YP_003843871.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307687909|ref|ZP_07630355.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302578095|gb|ADL52107.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 326 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 144/335 (42%), Gaps = 31/335 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSF--LQ 56 +++VTG GFIGS L L+ + + Y + N+ L + + L S Sbjct: 3 KVLVTGADGFIGSHLTELLLE----EGYDVRAFAYYNSFNTWGWLDTLPKDKLNSIDVFT 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R A++ D + + AA + S D ++ TNI GT +L+ R Sbjct: 59 GDIRDPNGVRKAMEGI--DEVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQAAR---- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R L ST EVYG+ E P+ SPYSATK +D + ++ ++ Sbjct: 113 -----DLNTERVLVTSTSEVYGTAQYVPIDEKHPFQGQSPYSATKIGADRIAESFYRSFN 167 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ + N YGP +IP IT+++ G G RD+ YV+D R + Sbjct: 168 MPITIVRPFNTYGPRQSARAVIPTIITQLLAGKEEIRLGSLTPTRDFNYVKDTARGFIEI 227 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGHDR 292 K + IGE NI NE IG L LI + ++I I Sbjct: 228 AKSEKAIGEEINIATENE-------ISIGELASELIRQINPKAKIICDDDRIRPEKSEVE 280 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + KIKS W P+ + E G+ +T+ W +N Sbjct: 281 RLLGSNKKIKSLTNWEPKYSFEEGIAETINWLKNN 315 >gi|261368339|ref|ZP_05981222.1| UDP-glucuronate 5'-epimerase [Subdoligranulum variabile DSM 15176] gi|282569635|gb|EFB75170.1| UDP-glucuronate 5'-epimerase [Subdoligranulum variabile DSM 15176] Length = 362 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 29/345 (8%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQV 57 +++TG AGFIG+ L R L ++V+ +D + ++ L E+++ F F++ Sbjct: 13 ILITGAAGFIGANLAKRLLQGGPTVRVVGLDNVNDYYDVRIKEARLAELARYENFVFVRG 72 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ D+ + ++++P +VN AA++ V SIL D ++ +N+IG + +LE R SC Sbjct: 73 NLADKALVTGLFEQYRPQIVVNLAAQAGVRYSILNPDAYVESNLIGFYNILEACR--HSC 130 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYGS K +S +D NP S Y+ATK S + + A+ Y Sbjct: 131 -DDGAAGVEHLVYASSSSVYGSNTKVPYSTDDKVDNPVSLYAATKKSDELMAHAYAKLYN 189 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ ++ G + ++ G RD+ Y++D V + V Sbjct: 190 IPCTGLRFFTVYGPAGRPDMAYFGFTDKLRAGKTIQIFNYGHCQRDFTYIDDIVEGVVRV 249 Query: 237 LKK------GRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHTE 279 ++K G G + YNIG N +D V + + ++P Y +H E Sbjct: 250 MQKPPEKKNGPDGLPVPPYKLYNIGNNQPENLLDFVTILQEELVRAGVLPADYDFEAHKE 309 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D++ ++ + G+ P + +GL + WY Sbjct: 310 LVPM---QPGDVPVTYADTAPLERDFGFKPSTPLRTGLRRFAEWY 351 >gi|284926543|gb|ADC28895.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni IA3902] Length = 323 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDMEVISGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYAAPQSYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNKISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 169 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 312 >gi|299138641|ref|ZP_07031819.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298599277|gb|EFI55437.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 331 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 150/329 (45%), Gaps = 22/329 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GFIGS L +V L + + + T G+L L + L DI D Sbjct: 11 RVLVTGAGGFIGSHLAEQMVQ-LGARTRCLLRYTSQGSLGWLATSPLRSDMEILHGDIRD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + A+K+ D + + AA + S ++ TNI GT +LE R Sbjct: 70 KESVLRAVKD--ADVVFHLAALVGIPYSYESPRSYVQTNIEGTLNVLEAAR--------- 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ST EVYGS E+ SPYSATK +D + ++ ++G+PV + Sbjct: 119 QSGTERLICTSTSEVYGSALYVPIDENHALQGQSPYSATKIGADKIAESYHLSFGLPVSI 178 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 + N YGP +IP IT+ + + V L G+ RD+ +V D V L + Sbjct: 179 ARPFNAYGPRQSSRAVIPTIITQALAQTSVKL-GNLHTTRDFNFVSDTVAGFLAIAESSA 237 Query: 241 RIGERYNIGGNNERKNIDI-VFEIGFLLDALI-PKSYSHTELIRFIEDRPGHDRRYAIDS 298 IG+ NIG IDI + E+ L+ L + E +R + DR A S Sbjct: 238 TIGKTLNIG-----SGIDISIHELAELIFELTGTRCPVDVEEVRLRPEASEVDRLCA-SS 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + GW P+ ++ GL +T+ W N Sbjct: 292 LQLNTLTGWKPRVSLREGLERTIEWIGQN 320 >gi|227890973|ref|ZP_04008778.1| UDP-glucuronate 4-epimerase [Lactobacillus salivarius ATCC 11741] gi|227867382|gb|EEJ74803.1| UDP-glucuronate 4-epimerase [Lactobacillus salivarius ATCC 11741] Length = 362 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 92/357 (25%), Positives = 165/357 (46%), Gaps = 45/357 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKE---------ISQ--S 49 R+++TGGAGF+G+ L L+ +K + +L +D + ++ SLKE I+Q Sbjct: 13 RILITGGAGFVGANLILSLLRTVKGVNILTVDNMNDYYDV-SLKEWRLQQIETEINQHAE 71 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 + F F++ DI D + +F+PD +VN AA++ V SI D +I +NIIG + +LE Sbjct: 72 SKFEFIKGDIADAGLVNQIFTDFKPDIVVNLAAQAGVRNSITNPDAYIKSNIIGFYNILE 131 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKA 162 R + +++ + F S+ +YG +++PY S Y+ATK Sbjct: 132 ACRHSYD--NENGVEHLVFA--SSSSIYGD------GKEIPYKIDSNTDKQISLYAATKK 181 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S + L + H +GIPV YGP P+ ++I + ++ G RD Sbjct: 182 SDEVLAHVYSHLFGIPVTGLRFFTVYGPGGRPDMAYFKFTKKLINDEKIQIFNYGNCRRD 241 Query: 223 WLYVEDHVRALYLVLKKGRIGER-----------YNIGGNNERKNIDIV--FEIGFLLDA 269 + Y++D V + V+ + E+ YNIG ++ ++ V + + Sbjct: 242 FTYIDDVVEGVKRVM--AGVPEKSEQDLEPAYRIYNIGNHHPENLMEFVQILQDELVKAD 299 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++PK Y + + +PG D S+++ + + P + GL + + WY D Sbjct: 300 ILPKDYDFEGHMELVPMQPGDVAVTYADISELEKDFNFKPDTKLRVGLKRFIKWYRD 356 >gi|300214664|gb|ADJ79080.1| UDP-glucuronate 4-epimerase [Lactobacillus salivarius CECT 5713] Length = 359 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 51/360 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKE-----------ISQS 49 R+++TGGAGFIG+ L L+ +K + +L +D + ++ SLKE + Sbjct: 10 RILITGGAGFIGANLILSLLQTVKSVNILTVDNINDYYDI-SLKEWRLQQIESEATQHEE 68 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 + F F++ DI D + +F+PD +VN AA++ V SI D +I +NIIG + +LE Sbjct: 69 SKFEFIKGDISDVGLVNQIFADFKPDIVVNLAAQAGVRNSITNPDAYIKSNIIGFYNILE 128 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKA 162 R + +++ + F S+ +YG+ +++PY N P Y+ATK Sbjct: 129 ACRHSYD--NENGVEHLVFA--SSSSIYGN------GKEIPYKTDSNTDKPIFLYAATKK 178 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S + L + H +GIP+ YGP P+ ++I + ++ G RD Sbjct: 179 SDEMLAHVYSHLFGIPITGLRFFTVYGPGGRPDMAYFKFTKKLINDEKIQIFNYGNCRRD 238 Query: 223 WLYVEDHVRALYLVLKKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALI 271 + Y++D V + V+ + E+ YNIG ++ ++ V L D L+ Sbjct: 239 FTYIDDVVEGVKRVMSG--VPEKSEQDLEPAYRIYNIGNHHPENLMEFV---KILQDELV 293 Query: 272 -----PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PK Y + + +PG D S+++ + + P + GL K WY D Sbjct: 294 RANVLPKDYDFEGHMELVPMQPGDVAVTYADISELEKDFNFKPDTRLRVGLRKFAEWYRD 353 >gi|168203418|gb|ACA21553.1| NAD-dependant epimerase and dehydratase [Candidatus Pelagibacter ubique] Length = 325 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 164/329 (49%), Gaps = 21/329 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI-C 60 ++++ G + F GS R+++N LV TY N +I + ++++ Sbjct: 4 KVLILGISSFAGSTFVRHILNK---DYLVYG--TYFSNKIIFSDIKKKKNLKLFKINLEK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + K+ +P I++F++ V+ S L +++ N I L+ + L Sbjct: 59 DKDGLFNIAKKIKPSLIIDFSSICMVNESWLYPEKYTYVNCISKLSLIRKISLI------ 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ +F+ +ST EV+G+ ++ L +NPS+PY+ TK + L+ + + Sbjct: 113 --KNLKKFIYVSTPEVFGNTNQPLKESLQIFNPSTPYATTKLFIENLIHNYQPAKNKKFI 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 ++ SN YGP +LIP I + + ++GDG++ R+++Y +D AL ++KKG Sbjct: 171 IARFSNFYGPRQPSYRLIPKLILSIKKNIRFPIHGDGKSKRNYIYSDDFSEALLKIIKKG 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 G+ Y+ IV EI ++ I ++RF DR G D Y ++S + Sbjct: 231 VTGKTYHFSSEKLYSVYQIVHEICKQMNVDI------NTVVRFENDRSGKDYVYKLNSLR 284 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNW 329 ++E+GW + +++ G++K V Y++ N+ Sbjct: 285 TQNELGWKAKVSLKVGISK-VIEYMNLNF 312 >gi|282165390|ref|YP_003357775.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282157704|dbj|BAI62792.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 319 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 40/335 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS LC YL+ +V+ ID L +G+ +++K I + F+F++ D+ Sbjct: 5 VVTGGAGFIGSHLCEYLLGKGD-RVIAIDNLG-SGSKDNIKGILNNASFTFIKHDVRKPL 62 Query: 64 CIRSALKEFQPDAIVNFAAESH---VDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + D + N A+ + DR + E + TN +GT+ + ++ Sbjct: 63 KVREKV-----DYVYNLASRASPVDFDRYPV---EIMMTNSVGTY----------NAVNA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + RFL ST E YG D E P P S Y +K S+ L +A+ Sbjct: 105 ALEHGARFLTASTSETYGDPDVSPQPETYWGHVNPVGPRSCYDESKRFSEALTMAFVRHQ 164 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP + +++P +T+ + G + +YGDG R + YV D VR + Sbjct: 165 GLDGRIIRIFNTYGPRMRLDDGRVVPNFVTQALAGRPLTVYGDGSQTRSFCYVSDLVRGI 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDR 292 YL++ G+ N+G E ++ I I K+ S + + R + + R Sbjct: 225 YLMMHSPVKGQVVNLGNPREMTVLEFARTI-------IEKTGSSSAIDYRPLPENDPLQR 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D K K +GW P+ ++ GL T+ W+ D+ Sbjct: 278 R--PDIRKAKELLGWEPEVGLDEGLESTIAWFKDS 310 >gi|185479423|gb|ACC77730.1| hypothetical protein [Campylobacter jejuni] Length = 323 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC LV + + L+ + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLVK----KGFKVRALSQYNSFNFWGHLEKSPFLKDIEVISGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQGYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G+ GD RD +V D +L Sbjct: 169 NIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEYSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 312 >gi|206895772|ref|YP_002247634.1| nucleoside-diphosphate-sugar epimerase [Coprothermobacter proteolyticus DSM 5265] gi|206738389|gb|ACI17467.1| nucleoside-diphosphate-sugar epimerase [Coprothermobacter proteolyticus DSM 5265] Length = 313 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 30/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS L + LV + +V+VID L+ G+ + + +Q + +D+ Sbjct: 4 RALVTGGAGFIGSHLVKRLVAE-GAEVVVIDDLSM-GDASKVDSGAQ-----LIALDVRS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E R +K+F+PD + + AA+ ++ RS+ E + NI+G+ +++ S + Sbjct: 57 LEASR-VIKDFKPDVVFHLAAQINLRRSLQQPLEDASINILGSINVMQSL-----VESAE 110 Query: 122 KKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ST +YG +D E + NP SPY K S + + + +G+P + Sbjct: 111 DISKVKFVFSSTGGAIYGDVDILPTPETVEPNPLSPYGVAKFSVEKYLYYYHVVHGLPYV 170 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN YGP + ++ + + +M+ G + GDG RD+++VED V A Sbjct: 171 ALRYSNVYGPGQSTKGEAGVVAIFLEKMLAGETPVINGDGTQTRDFVFVEDVVDANIKAA 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDRRYA 295 +G +NIG E +DI LL + K + H I PG +R Sbjct: 231 CSDAVG-VFNIGTGRESSVLDIF----RLLKQYVGKDFPKVHGPAI------PGELQRSC 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D K K +GW P+ ++E GL T + + + Sbjct: 280 LDYGKAKDVLGWEPRVDLEEGLEITAQAFAEEH 312 >gi|289577720|ref|YP_003476347.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] gi|289527433|gb|ADD01785.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] Length = 328 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 17/333 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L L+ + +V + N L+ + DI D Sbjct: 7 KVLVTGAGGFIGSHLVERLI-ERGAEVRAFVRYNSKNNWGWLETSPYKDEIEIYTGDIRD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ ++K + + + AA + S + +I TN+ GT+ +L+ R Sbjct: 66 YDSVKDSMKGIE--IVFHLAALIGIPYSYISPLAYIKTNVEGTYNVLQSAR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ST EVYG+ E P P SPYSATK S+D + L++ + + +PV + Sbjct: 115 ELGVERVIHTSTSEVYGTAKYVPIDESHPLQPQSPYSATKISADNIALSFYNAFNLPVTI 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N YGP +IP IT+++ G G+ + RD YV D V + + Sbjct: 175 VRPFNTYGPRQSARAVIPTIITQIMSGKKQIKLGNLRPTRDMNYVIDTVNGFIKIAECDE 234 Query: 242 -IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE NIG E D+ I L+ I E RF ++ R D++K Sbjct: 235 LLGEITNIGSGKEISIGDLARLISQLMGVKIE---IEQEEQRFRPEK-SEVERLLCDNTK 290 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 +K W PQ +E GL +T+ W + ++P Sbjct: 291 MKKFTDWEPQYTLEEGLIQTINWMKTHLNMYKP 323 >gi|300115346|ref|YP_003761921.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] gi|299541283|gb|ADJ29600.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] Length = 327 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 151/340 (44%), Gaps = 27/340 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQV 57 ++++VTG GFIGS L LV QV + + N L +L E N+ + Sbjct: 3 IQVLVTGAGGFIGSHLTEELVRT-GYQVRALVHYNFQNNWGWLETLPEEVMKNVEVY-PA 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD +R A+ D + + AA + S + ++ N+ GT +L+ +C Sbjct: 61 DICDPFAVRKAV--VGCDMVYHLAALIAIPYSYIAPASYVEVNVKGTLNVLQ------AC 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R + ST EVYG+ E P SPYSA+K ++D LV ++ ++ + Sbjct: 113 KEEGVR---RMVHTSTSEVYGTAQYTPIDEGHPLVGQSPYSASKIAADKLVESYFLSFDL 169 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV N +GP +IP I + + G+ V G VRD+ YV+D V A + Sbjct: 170 PVATIRPFNTFGPRQSGRAVIPTLIAQALSGAEVISLGSLNPVRDFNYVKDTVFAYRAIA 229 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGHDRR 293 IG+ NIG +G L+ A++ S ++ R I + Sbjct: 230 ACDAAIGKVINIGPGKG-------ISVGDLVSAILGICDSSARIVCDERRIRPEKSEVFK 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 DS + K + W PQ ++ GL +TV W +N ++P Sbjct: 283 LICDSERAKEILQWEPQYSLRQGLEETVRWMRENLSRYKP 322 >gi|308172589|ref|YP_003919294.1| CDP-glucose 4,6-dehydratase [Bacillus amyloliquefaciens DSM 7] gi|307605453|emb|CBI41824.1| CDP-glucose 4,6-dehydratase [Bacillus amyloliquefaciens DSM 7] Length = 322 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L + L++ + LV D + + NL +++ Q N+ +Q + D Sbjct: 9 VFVTGCTGLLGSCLVKELIDQGANVTGLVRDTVPKS-NLYQGEQVKQMNI---VQGALED 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I AL E++ D + + AA++ V + NI+GT+ +LE R Sbjct: 65 LDVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRRHPLIK--- 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+D+ YG + E+MP PY +K+ +D L + +TYG+PV + Sbjct: 122 -----RVIVASSDKAYGDQPTLPYDENMPLQGKHPYDVSKSCADLLSHTYFNTYGLPVCI 176 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + C N YG ++IP I ++ G + DG +RD+ Y+ED V A L+ +K Sbjct: 177 TRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFIRDYFYIEDAVEAYLLLAEKM 236 Query: 241 R----IGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPGHDRRYA 295 GE +N + +++V +I +D+ L PK + ++ H+ ++ Sbjct: 237 EELNLAGEAFNFSNEIQLTVLELVEKILKAMDSDLKPK----------VLNQGSHEIKHQ 286 Query: 296 -IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W P ++ GL KT+ WY Sbjct: 287 YLSAEKARKLLNWTPAHAIDEGLEKTIEWY 316 >gi|257885234|ref|ZP_05664887.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,501] gi|257821086|gb|EEV48220.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,501] Length = 318 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 34/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L YL + KI +V+D L+ N + +F++ D D Sbjct: 7 ILITGGAGFIGSMLANYLGKENKI--VVVDDLSMGKKEN----LDMEKRVTFIEGDASDP 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +K++Q I + AA + V S+ + N +LLE R + S L Sbjct: 61 QLMERIMKQYQFAYIFHLAAVASVADSVERPLDTHRVNFDSALLLLELVRKYQSGLK--- 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 118 ----RLVFSSSAAVYGDEPTLPKKEESVIRPLTPYAIDKFAAEQYVLDYCHLYDVPTSAV 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 N YGP P I+ ++ E + L+GDG RD++Y+ED ++AL Sbjct: 174 RFFNVYGPNQNPNSPYSGVISILVDRYKKQLAGEKTEFTLFGDGSQSRDFVYIEDVIQAL 233 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHD 291 LV K+ + +G+++N+G ++++ I +L TEL +++ +R G Sbjct: 234 LLVAKEEKALGQQFNVGTGKSTTLLELIHSIDQIL---------GTELALKYEAERSGDI 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D SKI+S +G+ P+ ++ +G+ + + +D Sbjct: 285 RDSLADISKIRS-LGYQPKFDILNGMERYLKTEID 318 >gi|229084135|ref|ZP_04216424.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-44] gi|228699171|gb|EEL51867.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-44] Length = 315 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M++++TGGAGFIGS L L+ K QV+++D YA + L+++ Q F + Sbjct: 1 MKVLITGGAGFIGSHLALKLLEQGK-QVVLLDNFHSYYAKSRKQFQLEQVQQYGNVPFYE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI +E +++ +++ + DA+++ A V S+ +I NI GT +L + Sbjct: 60 CDILHKEDVKAVMQQEKVDAVIHLAGFPGVRPSLEMPGAYIDINIKGTSNVL-------T 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 C ++ + S+ VYG E+M SPY+A+K ++ L A+ + Y Sbjct: 113 CAGEENVKHV--IVASSSSVYGEKKGMPLQEEMANGRVLSPYAASKYGAESLCHAYQYMY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G + + YGP+ P+ I I +++ G + +YG G RD+ Y++D + L Sbjct: 171 GFQLNILRFFTVYGPWGRPDMAIASFIRKLLNGEEIVVYGKGTG-RDYTYIDDITEGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHDRR 293 L+ R + YN+G N L+ L+ + H L+R + R G Sbjct: 230 TLESNR-SDVYNLGSNEP-----------ILMTELLTQLEKHFPLMRVRREAHRKGDVTS 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK + ++G+ P+ + GL +T+ W Sbjct: 278 TWADISKAREQLGYEPRVSFAEGLERTIAW 307 >gi|304316399|ref|YP_003851544.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777901|gb|ADL68460.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ D V+V+D N+++ K+ + + F VDI Sbjct: 1 MNILVTGGAGFIGSNIVDLLI-DNGYDVIVVD------NMSTGKKENINKKARFYNVDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ + D +++ AA+ + RSI NIIGT LLE R Sbjct: 54 DNDLYK-VFEDEKIDYVIHHAAQIDIQRSINDPVFDAKVNIIGTINLLECCR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D + + S+ VYG + E NP S Y +K + ++ + + YG+ Sbjct: 105 -KFDVKKIVYASSAAVYGDPEYLGVDEKHRVNPISYYGISKHTPEHYIKVYNELYGLKYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + I +M+ G + ++GDG RD++YV+D +A L L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANLLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G E NI N ++V + +++A + Y+ E R G +D Sbjct: 224 ENGD-NEIINISTNKATTINELVNIMNKIMNASLKPIYA--------EPRKGDIVHSYLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K K +GW P +E GL +TV +Y Sbjct: 275 NKKAKDVLGWKPDYELEDGLKETVEYY 301 >gi|242281084|ref|YP_002993213.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] gi|242123978|gb|ACS81674.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] Length = 319 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 32/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG IG L ++ +V+V+D L+ +G N L +F++ DI Sbjct: 5 RVLVTGGAGAIGLNLIERMLAAGVSKVMVLDDLS-SGYKNYL---PNDERITFVKADIGQ 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E R ++EF P+ + + AA S+ + + NIIGT LLE + + Sbjct: 61 IETYRQEMEEFLPEYVFHLAAHFANQNSVDHPFKDVQANIIGTMNLLE--------ICKA 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K+ +F+ S+ VYG+ + + +D Y +PY+ K +++ V + + IP + Sbjct: 113 NKELKKFVYTSSSCVYGNAEM-MNEKDYIYPHETPYAINKYTAELYVKYYASMFQIPAVS 171 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL-V 236 N YGPY P +IP I R I+G +F+ GDG RD+ +V + + L L Sbjct: 172 IRVFNTYGPYE-PHGAYRNVIPNFIVRAIKGEPLFITGDGTETRDFTFVGNTAQLLTLAA 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR---PGHDRR 293 L + G+ +N G K ID L +I + S +E++ F E R DR Sbjct: 231 LSEITDGDIFNGGTGKPTKIID-------LAKMIIEYTGSSSEIV-FKERRNWDAVKDR- 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK +G+ P+ +E GL KTV WY+++ Sbjct: 282 -LSDISKSWKVLGYDPEVPLEEGLRKTVDWYMND 314 >gi|153952532|ref|YP_001397595.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939978|gb|ABS44719.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 323 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++VTG GFIGS LC L+ + + L + N + +S ++V D+ Sbjct: 4 ILVTGADGFIGSHLCESLIK----KGFKVRALNQYNSFNFWGHLEKSPFLKDMEVISGDL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D K DAI + A + S ++ TN+ GT +LE + Sbjct: 60 RDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK------- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F+ ST EVYG+ E P P SPYSA+K ++D + L++ +++ + V Sbjct: 111 --KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ N YGP +IP IT+++ G GD RD +V D +L Sbjct: 169 NIARPFNTYGPRQSARAIIPTIITQILSGVKEIKLGDLSPKRDLNFVLDTCEGFISLLNL 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 GE YNIG E +++ I +LD+ ++ I+D RP + R Sbjct: 229 KHFGEVYNIGSGVEHSMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFR 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K+K W + ++E GL +++ ++ +N Sbjct: 279 LCCDANKLKKATNWQSKISLEEGLRQSIEYFKEN 312 >gi|257869641|ref|ZP_05649294.1| NAD-dependent epimerase/dehydratase [Enterococcus gallinarum EG2] gi|257803805|gb|EEV32627.1| NAD-dependent epimerase/dehydratase [Enterococcus gallinarum EG2] Length = 316 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 156/329 (47%), Gaps = 35/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ V+GGAGFIGS L L+ + +V+V+D L+ GN+N+L + + +F + DI Sbjct: 1 MKYFVSGGAGFIGSTLVNRLIEEGN-EVIVVDDLS-MGNVNNLID---NKRLTFFKADIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R K I + AA + V SI E N+ T LLE + + Sbjct: 56 DIELVREIFKNNSFSYIFHLAAVASVADSIERPFETHQVNMEATLDLLELAK-------E 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K+ RF+ S+ VYG SE P SPY+ K SS+ VL + YG+P Sbjct: 109 TQKNLKRFVFASSAAVYGDDQVLPKSEISRIKPLSPYAIDKYSSEQYVLLYNTLYGLPTS 168 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSH----------VF-LYGDGQNVRDWLYVEDH 229 N YGP P P + I +H VF ++GDG RD++YVED Sbjct: 169 AVRFFNVYGPNQNPSS--PYSGVLSIITNHFKKIRNNEKDVFTIFGDGSQTRDFVYVEDV 226 Query: 230 VRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 ++AL LV +K +GE +N+G D++ + + +I+F E R Sbjct: 227 LQALKLVSEKEEALGEVFNVGTGAPSSINDVL--------GIYESEMNIKPIIQFEESRK 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGL 317 G + D SK+K +IG+ P +++ G+ Sbjct: 279 GDIKDSVADISKLK-KIGFSPNYSLDEGI 306 >gi|256828185|ref|YP_003156913.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256577361|gb|ACU88497.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 326 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 33/331 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTG GFIGS L LV++ K++ L + Y G L++++ N L D+ Sbjct: 4 ILVTGADGFIGSHLVELLVHEGYKVKALSQYNSFNYWG---WLEDVACRNDIEVLSGDVR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D + + AA + S + D ++ TNI GT + C + Sbjct: 61 DPHFCKKITQGV--DTVFHLAALIAIPYSYVAPDSYVDTNIKGTLNI---------CQAA 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST EVYG+ E+ P SPYSATK ++D + +++ + + +PV Sbjct: 110 LENSVGRVVHTSTSEVYGTAQYVPIDENHPLQAQSPYSATKIAADAMAMSFFNAFSLPVT 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 ++ N YGP +IP IT++ G GD RD+ +V D L L + Sbjct: 170 IARPFNTYGPRQSARAVIPTIITQIANGVQKIKLGDVTPTRDFNFVTDTCLGFLALARSE 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 IG+ NIG E V E L+ L+ + FI D RP R Sbjct: 230 KTIGQTVNIGSGTEVS----VEETLNLIKELMRSD------VEFITDGKRIRPEKSEVFR 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S+I+ G+ P+ ++ GL +T+ W+ Sbjct: 280 LCCDNSRIRELTGFTPRHSLREGLQETINWF 310 >gi|219117381|ref|XP_002179485.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409376|gb|EEC49308.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] Length = 408 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 151/335 (45%), Gaps = 33/335 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEI-SQSNLFS 53 +++VTGGAGFIGS + YL+ V++ID++ NL L++ + Sbjct: 63 KVLVTGGAGFIGSHVAEYLLARGD-DVVIIDEMNDYYDIRIKQANLELLRQAYTDEKRLK 121 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DICD + ++ +P + + AA + V SI +I +NI GT L+E + Sbjct: 122 IYHGDICDEALMEQIFQDERPQWVCHMAARAGVRPSIQDPYVYIHSNIKGTTHLMELSA- 180 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWG 172 K + F+ S+ VYG FSE+ + NP SPY+A+K + + L + Sbjct: 181 --------KFNVKNFVFASSSSVYGGSKSTFFSEEEVVDNPVSPYAASKKACELLAYTYH 232 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y + + YGP P+ I R+ G + +GDG + RD+ Y+ D V Sbjct: 233 HLYQLNISALRFFTVYGPRGRPDMAPFKFIDRVSRGVEIQQFGDGSSSRDYTYISDIVDG 292 Query: 233 LYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + + + E +N+G G + ++ ID L+ K +IR + D+PG Sbjct: 293 VVRAIDRPHKYEVFNLGKGSGTSLKEFID-----------LVQKHTDRKAVIRVMPDQPG 341 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK +G+ + + E G+ +T WY Sbjct: 342 DVPYTCADVSKADRLLGYKSKISFEEGIRRTAHWY 376 >gi|167628839|ref|YP_001679338.1| nad-dependent epimerase/dehydratase, putative [Heliobacterium modesticaldum Ice1] gi|167591579|gb|ABZ83327.1| nad-dependent epimerase/dehydratase, putative [Heliobacterium modesticaldum Ice1] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 109/378 (28%), Positives = 167/378 (44%), Gaps = 75/378 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLT--YAGNL----------NSLKE 45 M ++VTGGAGFIG R++V L V V+D L+ A NL +SL + Sbjct: 1 MNILVTGGAGFIG----RWVVLQLLRAGHHVWVVDDLSNGRAENLAYGDEALVGSDSLAD 56 Query: 46 ISQSNLFS----FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSI-LGADEFITTN 100 + + + F DICDRE +R +E + D + AAE +V +SI AD F + Sbjct: 57 PCCTGIVTGTLIFEVGDICDRERLRRWFEEHRFDLCYHLAAEINVQKSIDFPADTF-RRD 115 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLD---------KGL------- 144 + GTF LLE R + + RF+ +ST VY + +GL Sbjct: 116 VEGTFGLLELCREFGT----------RFVFMSTCMVYAPFEEAAADRASRRGLELADGQG 165 Query: 145 --------------FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP 190 E P P+SPY+ K S ++L L++ H YG+PV + N YGP Sbjct: 166 MNGCGYGDGGAPAGIDERHPVLPASPYAGAKLSGEHLALSYYHAYGLPVTVIRPFNTYGP 225 Query: 191 YHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR-ALYLVLKKGRIGERY 246 Y ++ + + R + + ++GDG RD LYVED R + + + IG+ Sbjct: 226 YQKTNGEGGVVAIFVERALREEPLHIFGDGTQTRDLLYVEDCARFVIQAGMDRQAIGKTL 285 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RRYAIDSSKIKSEI 305 N G + ++ +G ++ A S H P + RR D + K + Sbjct: 286 NAGSGRDVSINELARLVGEVVQAGPGFSVCHV-----AHPHPQSEIRRLLCDFGEAKRLL 340 Query: 306 GWFPQENMESGLNKTVCW 323 GW PQ ++E G+ +T W Sbjct: 341 GWEPQVSLEEGIARTADW 358 >gi|283779788|ref|YP_003370543.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068] gi|283438241|gb|ADB16683.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068] Length = 310 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 30/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS L + LV QV V+D L+ N I Q + Q D+ D Sbjct: 5 LVTGGAGFVGSHLTQALVKRGH-QVRVLDNLSTGAAKNLTGLIDQIEIH---QADLLDAN 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +AL+ + + + AA + V RS+ E + T LL K Sbjct: 61 AVSAALQGV--EWVFHQAALASVPRSVAEPLETHAACVTATVQLLHLAV---------KA 109 Query: 124 DQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ++ YG+ + E D+P P SPY+A K +++Y +++ H+YG+ + Sbjct: 110 GVKRVVYAASSSAYGNQATPVKRETDLP-APLSPYAAAKLAAEYYCVSFYHSYGLETVAL 168 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +GP P +IP+ I R++E +YGDG RD+ +VE+ V A L Sbjct: 169 RYFNVFGPRQDPSGPYAAVIPIFIKRLLEAKSPIIYGDGLQTRDFTFVENVVEANLLAAT 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +G NIG ++++ I L I F +R G R D Sbjct: 229 STGAVGRVMNIGNGQSTSLVELLASINRALGTNIAA--------EFQPERTGDVRDSLAD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 S + +G+ P+ ++E GL +T+ +Y Sbjct: 281 ISLARELLGYVPRVDLEQGLARTIAYY 307 >gi|225856097|ref|YP_002737608.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Streptococcus pneumoniae P1031] gi|1870164|emb|CAB05928.1| unknown [Streptococcus pneumoniae] gi|68642278|emb|CAI32707.1| putative epimerase [Streptococcus pneumoniae] gi|125857150|emb|CAI30302.1| putative epimerase [Streptococcus pneumoniae] gi|225726175|gb|ACO22027.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Streptococcus pneumoniae P1031] gi|301793611|emb|CBW35991.1| putative epimerase [Streptococcus pneumoniae INV104] gi|332204375|gb|EGJ18440.1| NAD dependent epimerase/dehydratase family protein [Streptococcus pneumoniae GA47901] Length = 356 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 29/350 (8%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLT--YAGNLNSLKEISQSNLFS------ 53 +++TG AGFIGS L R L+ + + ++ +D L Y L + + + L Sbjct: 6 ILITGVAGFIGSNLVRKLLELEGTMTIIGLDNLNDYYDIALKDYRLLQLNKLIQDYPEKN 65 Query: 54 --FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F++ DI D+ I K + P +VN AA++ V SI D +I +NI+G +LE Sbjct: 66 WIFIKGDIADKMLINKIFKSYHPQIVVNLAAQAGVRYSITNPDVYIESNIVGFHNVLEAC 125 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLA 170 R + + + S+ VYG K F +ED NP S Y+ATK +++ A Sbjct: 126 RHSYEIYDGGVE---HLVYASSSSVYGGNKKIPFATEDKVDNPISLYAATKKTNELQAYA 182 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++ GS + +Y G RD+ Y++D V Sbjct: 183 YSKIYNIPSTGLRFFTVYGPAGRPDMAYFGFTDKLRSGSDIEIYNHGNCKRDFTYIDDIV 242 Query: 231 RALYLVLK---KGRIG---------ERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYS 276 + V++ K +G + YNIG + +D V + + ++P++Y Sbjct: 243 EGIVRVMQSAPKKLVGSDNLPLAPYKVYNIGNSKPENLLDFVDVLQQELIKAGVLPENYD 302 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +PG D+S ++ + G+ P+ ++ GL K WY D Sbjct: 303 FDSHKKLVPMQPGDVPVTYADTSDLERDFGFKPKTSLREGLRKFAEWYKD 352 >gi|124004204|ref|ZP_01689050.1| UDP-glucose 4-epimerase [Microscilla marina ATCC 23134] gi|123990274|gb|EAY29773.1| UDP-glucose 4-epimerase [Microscilla marina ATCC 23134] Length = 331 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 29/333 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS L YL+ +V V+D L+ GN ++++ + F F++ DI D Sbjct: 16 FLITGGAGFIGSNLIEYLLKYNAKEVRVLDNLS-TGNYDNIQPFEKHQQFKFIEGDIRDI 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A K D I + AA V RSI ++ TTN + L + + K Sbjct: 75 ETCQKACKGV--DYISHQAALGSVPRSI---NDPATTNAVNISGFL-------NMMIAAK 122 Query: 123 KDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + + S+ VYG ED +P SPY+ TK ++ +G YG+ ++ Sbjct: 123 DNHIKGMVYASSSSVYGDSKLLPKQEDKIGHPLSPYAVTKLVNEQYARVFGQVYGLKLIG 182 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA---LY 234 N +GP P+ +IPL I +++ ++GDG+ RD+ ++E+ V+A Sbjct: 183 LRYFNVFGPRQSPKGAYAAVIPLFIQALMDNQPPTIFGDGEQTRDFTFIENVVQANIKAM 242 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 K+ GE YNIG R +++ +F I L KS H + + R G R Sbjct: 243 FATKEAAWGEAYNIGVGG-RTSLNELFNI------LKEKSGKHFS-PAYSKPRVGDVRDS 294 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK + +G+ PQ ++ GL T+ W+ N Sbjct: 295 LADISKSNNLLGYAPQITIQEGLQLTLDWFKQN 327 >gi|314935467|ref|ZP_07842819.1| capsular polysaccharide biosynthesis protein I [Staphylococcus hominis subsp. hominis C80] gi|313656032|gb|EFS19772.1| capsular polysaccharide biosynthesis protein I [Staphylococcus hominis subsp. hominis C80] Length = 335 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 165/349 (47%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIGS L + L+N +V+ ID + Y+ L + LK I + + F+F + Sbjct: 1 MKVLITGVAGFIGSTLAKKLINQ-GYEVIGIDNINDYYSVELKEDRLKSIGKDH-FTFYK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D E + ++ +P+ +VN AA++ V S+ +I +NI+G +LE Sbjct: 59 TDLEDYEKVNQIFEDEKPEVVVNLAAQAGVRYSLENPKAYIDSNIVGFMNILE------G 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG+ +K + D +P S Y+ATK S++ + + H Y Sbjct: 113 CRHHEVK---HLIYASSSSVYGANTNKPFKTSDNIDHPLSLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + +++ + +Y G +RD+ Y++D V A+ Sbjct: 170 NLPTTGLRFFTVYGPWGRPDMALFKFTKAVVDDETIDVYNHGNMMRDFTYIDDIVEAISR 229 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +++K YNIG N+ + ++ V I L K+Y Sbjct: 230 LIQKPAQPNPEWSGANPDPSSSYAPYKIYNIGNNSPVRLMEFVEAIENKLGKTAKKNY-- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG + + I + PQ +++ G+NK + WYLD Sbjct: 288 ------MDLQPGDVPETYANVDDLFKNIDFKPQTSIQDGVNKFIDWYLD 330 >gi|116327928|ref|YP_797648.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330810|ref|YP_800528.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|4234783|gb|AAD12951.1| unknown [Leptospira borgpetersenii] gi|116120672|gb|ABJ78715.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124499|gb|ABJ75770.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 332 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 29/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNL---FSFLQ 56 +++VTG GFIGS L LV L +V Y + N+ + S++ F Sbjct: 3 KILVTGADGFIGSHLTEALVR-LGFEV---KAFVYYNSFNTWGWLDYCSSDVRGKFEIFT 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R+A+K DA+++ AA + S D ++ TNI GT +L+ R Sbjct: 59 GDVRDPNGVRTAMKGI--DAVLHLAALIGIPYSYHSPDTYVDTNIKGTLNVLQAAR---- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R + ST EVYG+ +E+ P SPYSA+K +D L ++ ++ Sbjct: 113 -----DLNLSRVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSFS 167 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV++ N YGP +IP IT+++ G G RD+ +V D V Sbjct: 168 TPVIIVRPFNTYGPRQSARAIIPTVITQLLSGKTKIQLGSTSPTRDFNFVTDTVNGFISA 227 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 LK K +GE NIG E D V I +LD K + I R Sbjct: 228 LKSKQGLGEVINIGNGFEISVGDTVKLIASILD----KEVEIVSDVNRIRPEKSEVERLW 283 Query: 296 IDSSKIKSEIGWFPQ----ENMESGLNKTVCWY 324 + K K GW P E + GL +T+ W+ Sbjct: 284 SSNQKAKDLFGWQPAYSGLEGFKRGLTETIEWF 316 >gi|271969517|ref|YP_003343713.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] gi|270512692|gb|ACZ90970.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] Length = 314 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 152/326 (46%), Gaps = 23/326 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ D +V+ +D L+ +G+ +L ++S LF Q+D+ Sbjct: 1 MRILVTGGAGFIGSNLVDRLLADGH-EVMAVDDLS-SGDRGNLVAAAESPLFRLHQMDVR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + E++P+ + + AA+ V +S+ N+ GT +L + Sbjct: 59 DPALI-GLVAEWKPEVVCHLAAQISVRKSVADPVHDARLNVEGTASVLT---------AA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG D +P SPY+A+K S++ + A+ +GI Sbjct: 109 HHGGTRKVVFASSVAVYGMPAVIPVPGDAAVDPRSPYAASKLSAETYLAAFKALHGIDYT 168 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P+ ++ + +I G+ LYGDG RD+++V+D V Sbjct: 169 TLVLANVYGPRQSPDGEAGVVAIFTDALINGTPTVLYGDGTQTRDYVFVDDVVDGFARAC 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G R+N+G E + L L+ ++ + E RPG A+D Sbjct: 229 GSAGNGRRFNLGTGVETTD--------RALHTLVAEAVGAADGPGRAEARPGDLPAMAVD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 + +GW PQ ++ +GL TV W Sbjct: 281 PAPAIEGLGWRPQTDLATGLKATVDW 306 >gi|303240158|ref|ZP_07326678.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] gi|302592249|gb|EFL61977.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] Length = 330 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 150/332 (45%), Gaps = 25/332 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQVD 58 ++ VTG GFIGS L LV V + + GN +++ E + + + + D Sbjct: 7 KVFVTGAEGFIGSHLTEALVGK-GCNVTALVQYNSFGNWGWIDTFPETVKKEI-NVVSGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D ++SAL + +++ AA + S D + TN++GT +++ R C Sbjct: 65 IRDYFGLKSAL--LGNEVVMHLAALIAIPYSYSAPDAYAKTNVLGTLNVMQACR---EC- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + + ST EVYG+ E+ P SPYSA+K +D +V ++ ++Y +P Sbjct: 119 -----DVLKVVHTSTSEVYGTAKYVPIDENHPVQGQSPYSASKIGADKIVESYFYSYNVP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YGP +IP IT+++ G G+ + RD YV D +R L + Sbjct: 174 AATIRPFNTYGPRQSARAIIPTVITQILSGKKEIKVGNLKPTRDLNYVSDTIRGFMLTAE 233 Query: 239 K-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + IG+ NIG E D+V +I ++ I + RP + + Sbjct: 234 RDDSIGQVINIGSGREISIGDLVNKIANIMGKEIDIISEEQRM------RPEKSEVFRLL 287 Query: 298 SS--KIKSEIGWFPQENMESGLNKTVCWYLDN 327 S K +G+ PQ +++ GL KT+ W +N Sbjct: 288 GSIEKASKILGYEPQVSLDEGLEKTIKWLSEN 319 >gi|330945923|gb|EGH47271.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 123 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%) Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHD 291 ++ +G +GE YNIGG+NE+KNID+V I LL+ L P+ + +++LI ++ DRPGHD Sbjct: 1 MVTEGEVGETYNIGGHNEQKNIDVVRGICALLNELAPQHPAGVAQYSDLITYVVDRPGHD 60 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +RYAID+SKI E+ W P+E ESGL KTV WYLDN W R Sbjct: 61 QRYAIDASKIDKELDWTPEETFESGLRKTVQWYLDNLDWCR 101 >gi|222109621|ref|YP_002551885.1| nad-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] gi|221729065|gb|ACM31885.1| NAD-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] Length = 336 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 157/346 (45%), Gaps = 41/346 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVDI 59 +VTG AGFIG + L+ + +V+ ID L ++ L + F+F Q+D+ Sbjct: 5 LVTGCAGFIGMHCAQRLLERGE-RVVGIDNLNAYYDVGLKHARLGRLHGQGDFTFEQIDV 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + +P +++ AA++ V SI D++ +N++G +L+ C + Sbjct: 64 ADRDAMHALFARVRPHRVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQ------GCRA 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q + + S+ VYG K FSE D +P S Y+ATK +++ + A+ H YGIP Sbjct: 118 QQVE---HLVFASSSSVYGGNAKLPFSERDAVDHPVSYYAATKKANEVMAHAYAHLYGIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 YGP+ P+ + M+ G + +YG+GQ VRD+ Y++D V + VL Sbjct: 175 TTGLRFFTVYGPWGRPDMALFKFTRAMLAGETIDVYGEGQLVRDFTYIDDIVEGVLRVLD 234 Query: 239 KGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 K + +NIG + +D + + ++ L Sbjct: 235 KPATPDAAFDPLSPSPGTGLAPYRIFNIGNSAPTLLMDYIHA--------LEEALGMVAL 286 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R + +PG A D + + S +G+ P + G+ + V WY D Sbjct: 287 KRMLPLQPGDMHSTAADMAALASWVGFAPHTPVRDGVARFVHWYKD 332 >gi|294632119|ref|ZP_06710679.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. e14] gi|292835452|gb|EFF93801.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. e14] Length = 343 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 32/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D V+ +D L+ + N + E+ + F F+ D D Sbjct: 31 RALVTGGAGFVGSHLCARLL-DAGTGVVCLDNLSTGAHAN-VAELERRRGFRFVHADATD 88 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R +F D +++FA + + E + GT LE R Sbjct: 89 PGAVRGLPGDF--DLVLHFACPASPADYLRLPLETLEVGSAGTRNALERAR--------- 137 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 D RFL ST EVYG + E P P S Y +K ++ LV A +G Sbjct: 138 -ADGARFLLASTSEVYGDPLEHPQRESYWGNVNPVGPRSVYDESKRFAEALVTAHRQVHG 196 Query: 177 IPVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP + +P I + ++G+ + + GDG R YV+D V + Sbjct: 197 TDTAIVRIFNTYGPRMRLGDGRAVPTFIAQALDGAPLTVAGDGGQTRSLCYVDDTVDGVL 256 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-R 293 + G G NIGG +E +++ I L + IRF+ DRP D R Sbjct: 257 ALAASGESGP-VNIGGGDEITVLELARRIVELTGS--------RSRIRFV-DRPVDDPGR 306 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+ + +GW P+ + GL +T+ W+ Sbjct: 307 RRPDTRLAREALGWQPRVDWTEGLARTIGWF 337 >gi|251780451|ref|ZP_04823371.1| NAD dependent epimerase/dehydratase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084766|gb|EES50656.1| NAD dependent epimerase/dehydratase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 334 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 29/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L++D +V+ +D L+ G L ++KE + + F F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKRLLDDGH-KVVALDNLS-NGQLENIKEFNGRD-FKFIKGDIQ 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 + + KE + D I + AA +V SI + +GTF +LE+ ++ Sbjct: 58 NEADLDEVFKE-KYDIIYHLAASINVQDSIDDPRTTFFNDTVGTFNILEKAKIQMFGKNG 116 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W S + + + +ST VY D E+ P P SPY +K +++ +V Sbjct: 117 EMDGDGWIVDSSENNHPCKVVFMSTCMVYDVADDKGIDENHPAKPISPYGGSKIAAENMV 176 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I + G + +YG GQ RD LY Sbjct: 177 LSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFINNSLHGRDINIYGSGQQTRDLLY 236 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+D R + + ++ GE N G D+ L +I K ++ I Sbjct: 237 VKDCARFVVMTGYSEKVNGEIVNAGTGR-----DVTVN---ELAEIITKERVKINHVKHI 288 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + + SK K +GW P+ +E G+ +T W Sbjct: 289 HPQS-EIMKLKCNYSKAKQFMGWEPEYTLEKGIEETEQW 326 >gi|189218496|ref|YP_001939137.1| nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] gi|189185354|gb|ACD82539.1| Nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 169/355 (47%), Gaps = 41/355 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 ++ ++G AGF+G + R L+ +L +V ID L Y+ L LK + + F F +V Sbjct: 9 KIFISGAAGFLGYSTARRLL-ELGYKVAGIDNLNPYYSVELKEARLKILQGYSEFIFGKV 67 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D++ + + +F+PD ++++AA++ V S++ + +N+ G +LE R Sbjct: 68 DLLDKKAVEALFFDFEPDCVIHYAAQAGVRYSLVDPYAYAQSNVSGVVPILECCR----- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 KK FL S+ VYG F + P + P S Y+ATK +++ + ++ H + Sbjct: 123 ----KKGIGHFLLASSSSVYGMNRLIPFKVNHPADHPLSIYAATKKAAELIAHSYSHLFA 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IPV YGP+ P+ + + + +Y +G+ RD+ YV+D V A+ + Sbjct: 179 IPVSCLRFFTVYGPWGRPDMAYYKFASSIYRDRPIEVYAEGKLKRDYTYVDDVVEAVIRL 238 Query: 237 LK--------KGRIGE-----------RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + +G++ + R + GN + +NI L LI K Sbjct: 239 IDSPPQPNRGEGQLEDCLDPSVSTAPFRIHNVGNKQPENI-------LKLVHLIEKYLDK 291 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I+F+ PG D++ ++ EIG+ PQ ++E G+ + + W+ + + ++ Sbjct: 292 KARIKFLPMPPGDVECTYADTTTLEKEIGYSPQTSLEEGIGRFIKWFCNEGYRFK 346 >gi|239933214|ref|ZP_04690167.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] gi|291441558|ref|ZP_06580948.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] gi|291344453|gb|EFE71409.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] Length = 333 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 31/332 (9%) Query: 5 VTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 VTG GFIGS L LV + +++ +V + + G L +L ++L +++ D+ Sbjct: 9 VTGAEGFIGSHLTEALVASGHRVRAMVQYNSFSSYGWLETLS----ADLLEHVEIVLGDV 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R L+ D + AA + S ++ TN+ GT +LE R + Sbjct: 65 RDPGSVRGLLE--GADCAYHLAALIAIPYSYRAPHSYVDTNVTGTLNVLEAVRALGTP-- 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST E YG+ +ED P N SPY+A+KA D L ++ ++ PV Sbjct: 121 -------RLVHTSTSETYGTAQTVPITEDHPINTQSPYAASKAGGDRLADSYHASFDTPV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N +GP +IP I ++ G GD + RD+ +VED +A V Sbjct: 174 VTLRPFNTFGPRQSMRAVIPTVIGQVAAGQRTITLGDLRPTRDFTFVEDTAQAFLAVGTA 233 Query: 240 GR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RY 294 +G +N G E D+V IG ++D+ + L RP R Sbjct: 234 PAERVVGRTFNSGTGEEVSVGDLVALIGKVMDSPLDVREDPERL------RPAGSEVMRL 287 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D++++ + GW P+ + GL +T ++ D Sbjct: 288 VADATRLTAATGWRPRRTLAEGLTRTAEFFGD 319 >gi|227824404|ref|ZP_03989236.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] gi|226904903|gb|EEH90821.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] Length = 333 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 30/340 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVD 58 + +TG AGFIG L L++ V +D L A LK +S FSF + D Sbjct: 10 IFITGAAGFIGYHLALRLLSK-GYAVHGMDNLNAYYEVALKKERLKRLSYYPGFSFTEGD 68 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D++ + + P +VN AA++ V SI ++I +NI+G F +LE R Sbjct: 69 ISDKDAVEGVFTKLSPKIVVNLAAQAGVRYSIDHPRDYIDSNIVGFFTILEACR------ 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ +K FS P + P S Y+ATK S++ + + H YG+ Sbjct: 123 ---HHSVNHLVYASSSSVYGNQEKTPFSVTDPVDHPISLYAATKKSNELMAYTYSHLYGV 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ ++++ + +Y G RD+ YV+D V + +L Sbjct: 180 PTTGLRFFTVYGPFGRPDMAYFKFANKIMKDEPITIYNHGDMYRDFTYVDDIVTGIENLL 239 Query: 238 ----KKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + G G+ YNIG + K + + ++ K+ ++ +PG Sbjct: 240 PHPPQDGFGGDPYRIYNIGNSTPVKLMTFI--------EILEKALGKEAQKEYLPMQPGD 291 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + D S ++ + G+ P +E GL K WY W Sbjct: 292 VYQTFADVSALEKDFGFKPTTTIEEGLKKFAQWYKAYYHW 331 >gi|188590600|ref|YP_001920196.1| putative UDP-glucose 4-epimerase [Clostridium botulinum E3 str. Alaska E43] gi|188500881|gb|ACD54017.1| NAD dependent epimerase/dehydratase family [Clostridium botulinum E3 str. Alaska E43] Length = 334 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 29/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L++D +V+ +D L+ G L ++KE + + F F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKRLLDDGH-KVVALDNLS-NGQLENIKEFNGRD-FKFIKGDIQ 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 + + KE + D I + AA +V SI + +GTF +LE+ ++ Sbjct: 58 NEADLDEVFKE-KYDIIYHLAASINVQDSIDDPRTTFFNDTVGTFNILEKAKIQMFGKNG 116 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W S + + + +ST VY D E+ P P SPY +K +++ +V Sbjct: 117 EMDGDGWIVDSSENNHPCKVVFMSTCMVYDVADDKGIDENHPAKPISPYGGSKIAAENIV 176 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I + G + +YG GQ RD LY Sbjct: 177 LSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFINNSLHGRDINIYGSGQQTRDLLY 236 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+D R + + ++ GE N G D+ L +I K ++ I Sbjct: 237 VKDCARFVVMTGYSEKVNGEIVNAGTGR-----DVTVN---ELAEIITKERVKINHVKHI 288 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + + SK K +GW P+ +E G+ +T W Sbjct: 289 HPQS-EIMKLKCNYSKAKQFMGWEPEYTLEKGIEETEQW 326 >gi|182412714|ref|YP_001817780.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] gi|177839928|gb|ACB74180.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] Length = 324 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 30/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + R L +VL +D L Y+ L L E+ Q F F+Q Sbjct: 1 MKVLVTGAAGFIGYHVARRLAETKHCEVLGLDNLNDYYSVELKRARLTELEQLEDFRFVQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D + F+PD +V+ A++ V S + +NI G +LE R Sbjct: 61 ADFGEAAAFEGIYSHFKPDYVVHLGAQAGVRHSAENPAAYTHSNITGFLNVLEACR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 ++ + S+ VYG+ F ED + P S Y ATK S++ + + H Y Sbjct: 117 -----RRPPKHLVFASSSSVYGAHAVVPFREDANTDHPISYYGATKKSNELMAHTYAHLY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+ V YGP+ P+ + P+ ++ I G + L+ G+N RD+ YV+D V + Sbjct: 172 GLTVTGLRFFTVYGPWSRPD-MAPILFSQAICAGRPIKLFNQGRNRRDFTYVDDIVDGVV 230 Query: 235 LVLKKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VL +NIG N + ++++ + L + L K+ ++ + +P Sbjct: 231 KVLLYPPATLPVPPFRLFNIGHN---RPVEVLLFVQMLEELLGKKA-----VVELVPPQP 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G +++ IG+ P+ ++E GL + V W+ Sbjct: 283 GDMLETCASIDRLREAIGYSPRISLEDGLRRFVDWF 318 >gi|225028235|ref|ZP_03717427.1| hypothetical protein EUBHAL_02507 [Eubacterium hallii DSM 3353] gi|224954414|gb|EEG35623.1| hypothetical protein EUBHAL_02507 [Eubacterium hallii DSM 3353] Length = 361 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 162/351 (46%), Gaps = 35/351 (9%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 + VTG AGFIGS L L+ I ++ +D + ++N LKEI + + Sbjct: 11 VFVTGSAGFIGSNLVLELLRTQSPIHIIGLDNMNDYYDVNIKEWRLKEIEKCVAEHNDST 70 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F + D+ ++ I E +PD +VN A++ V SI D +I +N+IG + +LE Sbjct: 71 YVFYKDDLANKAIIDKIFAEHKPDIVVNLGAQAGVRYSITNPDAYIQSNMIGFYNILEAC 130 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + ++ D + S+ VYG+ K +S ED NP S Y+ATK S++ + A Sbjct: 131 RHSYDN-GEEGVDHLVYA--SSSSVYGTNKKVPYSTEDKVDNPVSLYAATKKSNELMAHA 187 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++++G + ++ G RD+ YV+D V Sbjct: 188 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGETIQIFNYGNCKRDFTYVDDIV 247 Query: 231 RALYLVL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY- 275 + V+ K G G YNIG +N +D V + + ++P Y Sbjct: 248 EGVKRVMQGAPEKKNGEDGLPIPPYAVYNIGNSNPENLLDFVTILQEELIRAEVLPADYD 307 Query: 276 --SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +H EL+ +PG D+S ++ + G+ P ++ +GL WY Sbjct: 308 FEAHKELVAM---QPGDVPVTFADTSALERDYGFKPDTSLRTGLRHFAEWY 355 >gi|220923106|ref|YP_002498408.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219947713|gb|ACL58105.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 331 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 154/329 (46%), Gaps = 25/329 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF+GS + R L + V + L GN + ++++ N +++ D Sbjct: 11 RVLVTGSTGFLGSWMVRTLRESGALVVGYVRDLNAYGN-SLADDLAKPNFVVHGRLE--D 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R A+ E++ D + + AA+ V ++ NI GT+ LL+ RL+ Sbjct: 68 LETLRRAVNEYEVDTVFHLAAQPIVGTALRDPVGTFEANIRGTWNLLDACRLYGKV---- 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+D+ YG D ++EDMP +PY +K+ +D L ++ TY +P+ + Sbjct: 124 ----ERILVASSDKSYGHSDVLPYTEDMPLIGRAPYDVSKSCTDLLARSYFETYNLPICI 179 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--- 237 + N YG +L+P I + G L DG VRD++YV D V A YL + Sbjct: 180 TRAGNFYGGGDLNFNRLVPGTIRWALRGERPVLRSDGTLVRDYIYVRDVV-AGYLAIGEA 238 Query: 238 --KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G GE +N+ +NE + F L P E + E R D ++ Sbjct: 239 MHEPGVAGEAFNL--SNETPLSALAFTNEILRACRRPD----LEPVILAEARSEIDAQH- 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K++ +GW + + L +TV WY Sbjct: 292 LSAEKVRRIVGWTARWSTADALAETVAWY 320 >gi|119509616|ref|ZP_01628763.1| capsular polysaccharide biosynthesis protein I [Nodularia spumigena CCY9414] gi|119465805|gb|EAW46695.1| capsular polysaccharide biosynthesis protein I [Nodularia spumigena CCY9414] Length = 335 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/349 (27%), Positives = 168/349 (48%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+N +V+ ID L Y +L L ++ LF+F Q Sbjct: 1 MKILVTGAAGFIGFHLSQRLLNRGD-EVIGIDNLNNYYDVSLKQARLAQLQSQQLFTFTQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D+E I + Q D +VN AA++ V S+ +I +NI+G +LE R Sbjct: 60 LDLGDQEGINNLFTTHQFDVVVNLAAQAGVRYSLQNPHAYINSNILGFTNILEGCRH--- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 SQ K F S+ VYG+ K FS D +P S Y+A+K +++ + + H Y Sbjct: 117 --SQVKHLVFA----SSSSVYGANTKTPFSIHDNVDHPISLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++ G + ++ G+ RD+ Y++D + + + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILSGQPIDVFNYGKMKRDFTYIDDIIEGVVI 230 Query: 236 V---LKKGRI---GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V + +G G++ YNIG NN ++++ I + D L K+ + Sbjct: 231 VTDNIPQGNPHWSGDKPDPGTSKAPYKIYNIGNNNP---VELLHFIEVIEDCLGMKAQKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + +++G+ P +E G+ + + WY D Sbjct: 288 -----MLPLQPGDVTMTYADVDDLIADVGFKPATPIEVGIRRFIDWYRD 331 >gi|148265804|ref|YP_001232510.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146399304|gb|ABQ27937.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 345 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 41/353 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + + V D L G+L +L+ + F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLAAHALTSGGYDLAVFDSLYRDGSLENLRWLKSRGTFRFVHGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + ++EF+PDAI + A + + SI N++GT LLE R + Sbjct: 61 NQNDVSRLVQEFRPDAIFHLAGQVAMTTSIANPRMDFEVNVLGTHNLLEAVRQF------ 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL----------------FSEDMPYNPSSPYSATKASS 164 Q + ST++VYG L++ F E + SPY +K ++ Sbjct: 115 --NPQAAVIYSSTNKVYGDLEQYSYRETETRYECIERPVGFDETTQLDFHSPYGCSKGAA 172 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFL------YG 215 D +L + +G+ + S+ YG F + I + +E + L G Sbjct: 173 DQYMLDYARIFGLKTAVFRHSSMYGGRQFATYDQGWIGWFCQKAVESKNGVLKEPFTISG 232 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +G+ VRD L+ +D R + VL++ I G+ +NIGG + + Sbjct: 233 NGKQVRDVLHADDMARLYFSVLERIDISKGQAFNIGGGIHNSLSLLELFALLEELTGVKL 292 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 Y R + R R + D +K K +GW PQ + G+ + V W D Sbjct: 293 DY------RKLPPRESDQRLFVADIAKAKRMLGWEPQVSAREGVGRMVEWVGD 339 >gi|199599661|ref|ZP_03213037.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] gi|199589449|gb|EDY97579.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] Length = 150 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 17/157 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ N +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYKNHPDVQIMVLDKLTYAGNKANIEDV-LGDRVKLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R + Sbjct: 60 ADKELVDKLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAARKY----- 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP 156 RF ISTDEVYG L ED+P + P Sbjct: 113 -----DVRFHHISTDEVYGDLP---LREDLPGHGEGP 141 >gi|42784429|ref|NP_981676.1| NAD dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] gi|42740361|gb|AAS44284.1| NAD dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] Length = 341 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 25/336 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 ++TG AGF+G L + L+ D +V+ ID + Y NL L+++ F F++ DI Sbjct: 13 LITGAAGFVGYFLSKKLL-DQGCKVIGIDNINDYYDVNLKYARLEQLKPYEKFIFIKGDI 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ I +E++P+ +VN AA++ V SI D +I +NIIG + +LE R + Sbjct: 72 SDKDMITKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACRHFPVE-- 129 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYG+ K F E D NP S Y++TK S++ + + H Y IP Sbjct: 130 -------HLVYASSSSVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYKIP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN--VRDWLYVEDHVRALY 234 YGP P+ + G + ++ GD +N RD+ Y++D V + Sbjct: 183 ATGLRFFTVYGPLGRPDMAYFGFTDKYFAGDSIKIFNNGDFENDLYRDFTYIDDIVEGIQ 242 Query: 235 LVLK---KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 +L KG + + +NIG NN K + + + +L + + + ++ I +PG Sbjct: 243 RLLSNPPKGDVEHKVFNIGNNNPEKLMVFIETLEKVLGKALGREVAFEKVFEPI--KPGD 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ + + P+ ++E GL + WY++ Sbjct: 301 VPATYASTDLLQKAVDFKPETSIEKGLQEFANWYIE 336 >gi|182677789|ref|YP_001831935.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633672|gb|ACB94446.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] Length = 344 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQVD 58 ++VTG AGFIGS L L+++ + +V+ ID + A L ++S F FL+ D Sbjct: 8 ILVTGVAGFIGSFLAARLLDENR-EVVGIDNMNAYYDPALKRARLAQLSSRAGFRFLEGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +R+A E +P +VN AA++ V S+ ++ +NI+G +LE R Sbjct: 67 LVDTDFMRAAFTETRPKIVVNLAAQAGVRYSLENPRSYVDSNIVGFLNILENCRAMGVE- 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ FS D +P S Y+A+K +++ + ++ H YG+ Sbjct: 126 --------HLVYASSSSVYGANPTMPFSTRDNVDHPVSLYAASKKANELMAHSYAHLYGL 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV YGP+ P+ + +++ G + ++ G RD+ Y++D V + V+ Sbjct: 178 PVTGLRFFTVYGPWGRPDMAYFIFTRKILAGEPIDVFNHGDLSRDFTYIDDIVDGVRKVM 237 Query: 238 KKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 G + YNIG N + +D++ + LL K Sbjct: 238 DHVPKGDPNWATNGASPATSTAPYQLYNIGNNRPERLLDMIETLETLLGRKAEK------ 291 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 RF+ +PG D ++ + G+ P+ + GL+ V WY D Sbjct: 292 --RFLPLQPGDVLATWADIDDLQKDTGFAPKTTLAQGLSHFVDWYRD 336 >gi|317055134|ref|YP_004103601.1| NAD-dependent epimerase/dehydratase [Ruminococcus albus 7] gi|315447403|gb|ADU20967.1| NAD-dependent epimerase/dehydratase [Ruminococcus albus 7] Length = 354 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 42/351 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNL---------- 51 + VTG AGFIGS L L L + ++ +D + ++ SLKE + + Sbjct: 9 VFVTGAAGFIGSNLVTKLFGMLDGVCIIGLDNMNDYYDV-SLKEYRIAEIEKAEKNSKCT 67 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F + D+ D+ I +E +P+ +VN AA++ V SI D +I +N+IG + +LE Sbjct: 68 FKFYKGDLADKALITKIFEEHKPEIVVNLAAQAGVRYSIENPDAYINSNMIGFYNILEAC 127 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + S+ VYG K FS +DM +P S Y+ATK S++ A Sbjct: 128 R---------HNPVEHLVYASSSSVYGGNKKVPFSTDDMVDHPVSLYAATKKSNELFAHA 178 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ +++ G + ++ G RD+ +V+D V Sbjct: 179 YSKLYNIPTTGLRFFTVYGPAGRPDMAYFGFTNKLVNGETIKIFNYGNCKRDFTFVDDIV 238 Query: 231 RALYLVLKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSY- 275 + V++K + GE YNIGG +D V + + ++P+ Y Sbjct: 239 EGIVRVMQKAPEKKNGEDGLPVPPYALYNIGGGTPENLLDFVHILSEELVRAGVLPEDYD 298 Query: 276 --SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +H EL+ +PG DS+ ++ + G+ P ++ +GL + WY Sbjct: 299 FDAHKELVPM---QPGDVPVTYADSTALERDFGFKPTIDLRTGLRRFAEWY 346 >gi|15614867|ref|NP_243170.1| nucleotide sugar epimerase [Bacillus halodurans C-125] gi|10174924|dbj|BAB06023.1| nucleotide sugar epimerase [Bacillus halodurans C-125] Length = 315 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 152/330 (46%), Gaps = 24/330 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS LC L+ + K+ V+ +D +L +KE + NL + + Sbjct: 1 MRILVTGAAGFIGSHLCEQLLMNEKVSVVGVDG-HIDSSLCKVKERNVRNLLKHPRFTLL 59 Query: 61 DRECIRSALKEF--QPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLWWS 116 ++ + L+ Q D I + + V RS G D +++T NI+ T LLE R Sbjct: 60 KQDLLTIDLEPLVDQVDVIYHLSGIPGV-RSSWGTDFKKYVTHNIVATQQLLEACR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +F+ IST VYG G E P SPY +K + ++L + + Sbjct: 115 -----RHSLEKFIYISTSSVYGQ-KNGKVGEKASPTPLSPYGVSKLTGEHLCNVYYRNFS 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP ++ YGP + I +I+ + ++GDG RD+ Y++D + A V Sbjct: 169 IPTVILRYFTVYGPRQRQDMAFHRFIKAIIDNQPIPIFGDGNQSRDFTYIDDCIAATCAV 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L IGE NIGG ER V +I +L+++ K ++F+E G Sbjct: 229 LHADVIGETINIGG-KERAT---VLQIISMLESIFQKDAK----LQFLEKPFGEPMSTWA 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK + + + P + G+ K V LD Sbjct: 281 DISKAEKLLRYSPNVPLLQGIEKEVDDLLD 310 >gi|113374879|gb|ABI34796.1| UDP-glucose 4'-epimerase [Thermus aquaticus] Length = 311 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 35/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + L+ + ++V V+D NL++ K + F QVD+ Sbjct: 1 MRVLVTGGAGFIGSHIAEALLRE-GLEVAVLD------NLSTGKRENVPPGVPFYQVDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +EF+P + + AA++ V S+ N++G LLE R + Sbjct: 54 DGEGVERVFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACR-------R 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ F + +YG + +G +E+ P P SPY+A+KA+ + + A+G YG+ Sbjct: 107 HGVEKLVFAS-TGGAIYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLKW 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHVR 231 + N YGP P ++ + R+++G V LY GD VRD++YV D Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGEPVTLYARRTPGDEGCVRDYVYVGDVAE 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L L + YN+G +++ L A+ + E++ RPG Sbjct: 226 AHTLALLS--LEGVYNVGTGEGHTTLEV-------LKAVAEAALKTPEVVH-APPRPGDL 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + K+ + GW P+ G+ TV Sbjct: 276 ERSVLSPLKLMAH-GWRPRVGFREGIRLTV 304 >gi|163847195|ref|YP_001635239.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525035|ref|YP_002569506.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668484|gb|ABY34850.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222448914|gb|ACM53180.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 337 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 100/360 (27%), Positives = 164/360 (45%), Gaps = 33/360 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L L +V+V+D L G +L ++ +++ ++VDI Sbjct: 5 RILVTGGAGFIGSELVTQLAAAGH-RVVVVDNLVN-GKRANLAHLADADV-ELVEVDIRQ 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE I ++ + IV A V S+ E N GT ILL+ R Sbjct: 62 REVIARLVQGVE---IVYHLACLGVRHSLHDPFENHDVNATGTLILLDLAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + D RF+ +S+ EVYG+ +E+ P P + Y K + + A+ +Y P ++ Sbjct: 110 RADVPRFVYVSSSEVYGTARWVPMTEEHPTYPMTVYGGGKLAGECYTRAFWESYRYPTVV 169 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 N++GP E ++IP + R + G + ++GDG RD+ YV D R + L Sbjct: 170 VRPFNSFGPRSHHEGDSGEVIPKFMLRAMAGLPMVIFGDGTQTRDFTYVSDTARGIMLAG 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IG +N+G E + E+ + ++ + + I + RPG R Sbjct: 230 MVDAAIGGTFNLGQGREIS----INELARTVATVVGRPDA---AIVYDIPRPGDVLRLYA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCN 356 DS++ + +G+ P +++ GL + WYL L E + N WK E S N Sbjct: 283 DSTRAQHVLGFTPTVSLQEGLQRLQEWYLSRGVAIADLLAEERVHN----WK--KEESVN 336 >gi|108762835|ref|YP_632167.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus xanthus DK 1622] gi|108466715|gb|ABF91900.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus xanthus DK 1622] Length = 324 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 28/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN-------LNSLKEISQSNLFS 53 MR++VTG AGFI + L+ V+ +D L +G+ L L + + F+ Sbjct: 1 MRVLVTGAAGFIAHHVSARLLARGD-AVIGVDNLDPSGDVALKQARLTRLGTLPGATGFT 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F VD+ D +R+ +E +P+A+V+ AA V A ++ N+ G +LE Sbjct: 60 FRPVDVTDSPSLRALFEEMRPEAVVHLAARVGVRAPAGTAQAYVDANVSGFLQVLE---- 115 Query: 114 WWSCLSQDKKDQFRFLQ-ISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 Q + R L S+ VYG+ F E + P S Y+ATK + + L A+ Sbjct: 116 ------QASAARVRHLVYASSSSVYGAGSVPPFQEGAAADHPLSVYAATKRADELLAHAY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 H +G+P YGP+ P+ + PL + I +G+ + L+G+G+ RD+ YVED Sbjct: 170 SHLHGLPTSGLRFFTVYGPWGRPD-MAPLRFLQAIRDGTELSLHGEGRMQRDFTYVEDVA 228 Query: 231 RALYLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A+ VL + G R+ + + + + + L L ++ ++ +PG Sbjct: 229 EAVVRVLDRPLPGAPRHRVLNVGRGEPVSVRAFLSVLERILGARAR-----VKSTPAQPG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D S ++ E G+ P+ ++E GL + V W+ + + Sbjct: 284 EMDATWADPSALERETGFRPRVSVEEGLTRLVAWFHEQS 322 >gi|221312890|ref|ZP_03594695.1| hypothetical protein BsubsN3_04039 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221222996|sp|O06485|YFNG_BACSU RecName: Full=Putative sugar dehydratase/epimerase yfnG gi|291483177|dbj|BAI84252.1| hypothetical protein BSNT_01244 [Bacillus subtilis subsp. natto BEST195] Length = 322 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 22/328 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L + L+ + LV D + + NL + I + N+ ++ + D Sbjct: 9 VFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQS-NLYQGEHIKKMNI---VRGSLED 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I AL E++ D + + AA++ V + NI+GT W+ L Sbjct: 65 LAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGT----------WNILEAC 114 Query: 122 KKDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K R + S+D+ YG + + E+MP PY +K+ +D + + HTYG+PV Sbjct: 115 RKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPV 174 Query: 180 LLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ C N YG ++IP I ++ G + DG VRD+ Y+ED V+A L+ + Sbjct: 175 CITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAE 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 K E N+ G + +I + L++ ++ K S+ + + + + + + Sbjct: 235 K---MEENNLAGEAFNFSNEIQLTVLELVEKILKKMNSNLK-PKVLNQGSNEIKHQYLSA 290 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 K + + W P ++ GL KT+ WY + Sbjct: 291 EKARKLLNWTPAYTIDEGLEKTIEWYTE 318 >gi|239996825|ref|ZP_04717349.1| capsular polysaccharide biosynthesis protein I [Alteromonas macleodii ATCC 27126] Length = 338 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 172/352 (48%), Gaps = 44/352 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLF 52 M+++VTG AGFIG+A+ +YL+N QV+ ID KL +A L+ +K + ++LF Sbjct: 1 MKILVTGAAGFIGAAVSQYLINRGD-QVVGIDNINDYYEVKLKHA-RLDEIKSSTAADLF 58 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 SF+++ + +R+ + + +E + D +V+ AA++ V S+ + ++ +NI+G +LE R Sbjct: 59 SFIEMGVEERDKMAALFEEHKFDRVVHLAAQAGVRYSLENPNAYVDSNIVGFVNILEGCR 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAW 171 +K + + S+ VYG+ + FSE + S Y+A+K +++ + + Sbjct: 119 -------HNKVEHLVY--ASSSSVYGANETMPFSEQHNVDHQVSLYAASKKANELMAHTY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y +P YGP+ P+ + ++EG + +Y G + RD+ Y++D V Sbjct: 170 SHLYNLPTTGLRFFTVYGPWGRPDMALFKFTKAILEGKTIQVYNYGNHRRDFTYIDDIVE 229 Query: 232 ALYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---- 286 + L + E ++ GGN + +++ + + A P L++FIE Sbjct: 230 GVIRSLDNVAKPNENWD-GGNPDPSTSKAPYKV-YNIGAQTP-----VHLLKFIETLESA 282 Query: 287 ------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG D S + + G+ P ++E+G+ V WY D Sbjct: 283 LGIEAKKELLPMQPGDVPDTYADVSSLVEDTGYQPSTDVETGVKAFVDWYRD 334 >gi|255523726|ref|ZP_05390692.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] gi|296186730|ref|ZP_06855132.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] gi|255512595|gb|EET88869.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] gi|296048767|gb|EFG88199.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] Length = 335 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 157/340 (46%), Gaps = 30/340 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L+ D Q++ +D L+ G + +++E + F F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKRLLEDGH-QIVALDNLS-NGRIENIEEFQGNKNFKFIKGDIK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D + +E + D + + AA +V SI + IGTF +LE+ ++ Sbjct: 59 DEAVLDEIFRE-KFDIVYHLAASINVQDSIDDPRTTFYNDTIGTFNILEKAKIQMFGKNG 117 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W S++ + + +ST VY + E P P SPY +K +++ +V Sbjct: 118 RMDGDGWVLDSEEDTYPCKVVFMSTCMVYDVAAEAGIDEKHPVKPVSPYGGSKIAAENMV 177 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I I G + +YG G+ RD LY Sbjct: 178 LSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFINNSIHGRDINIYGSGEQTRDLLY 237 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGN--NERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V+D R ++V+ G N+ GN N D+ L +I K ++ Sbjct: 238 VKDCAR--FVVMS----GYSQNVNGNIINAGTGRDVTIN---ELAEIITKDRVKVNHVKH 288 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I + + + +K K I W P+ +E G+ +T W Sbjct: 289 IHPQS-EIMKLKCNYNKAKQLINWEPEYTLEQGIEETEQW 327 >gi|15805738|ref|NP_294434.1| UDP-glucose 4-epimerase [Deinococcus radiodurans R1] gi|6458415|gb|AAF10287.1|AE001927_6 UDP-glucose 4-epimerase, putative [Deinococcus radiodurans R1] Length = 344 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/338 (27%), Positives = 144/338 (42%), Gaps = 28/338 (8%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 + VTG GFIGS L LV +++ + I G+ L + + ++V D Sbjct: 19 VAVTGADGFIGSHLTEDLVRAGYRVRAMAI--YNSQGSYGWLDTVP-GEVMEHVEVQLGD 75 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +R+ +++ Q + + AA + S + ++ TNI GT +LE R + Sbjct: 76 VRDAGSVRALMRDVQ--TVYHLAALIAIPYSYVAPRSYVETNITGTLNVLEAARDLGTG- 132 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ E P SPYSATK +D L ++ ++G+P Sbjct: 133 --------RVIHTSTSEVYGTARSVPIHESHPLQGQSPYSATKIGADKLAESYFLSFGLP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ N YGP +IP I+++ G GD + RD+ YV D RA V + Sbjct: 185 VVTLRPFNTYGPRQSARAVIPTIISQLAAGRTEIKLGDLRPTRDFNYVADTARAFRAVGE 244 Query: 239 KGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RY 294 G +G N G E D V I ++ + L RP R Sbjct: 245 AGPEVLGRTLNAGSGREISVGDTVKLIAQVMGKDVEVKQEDERL------RPEGSEVMRL 298 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D ++++ GW PQ +E GL +T W+ D R Sbjct: 299 LADHRELQTLTGWQPQVTLEEGLKRTAEWFTDAGNLAR 336 >gi|182418448|ref|ZP_02949742.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum 5521] gi|237666568|ref|ZP_04526553.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377830|gb|EDT75374.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum 5521] gi|237657767|gb|EEP55322.1| NAD-dependent epimerase/dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 328 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 146/330 (44%), Gaps = 27/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSL-KEISQSNLFSFLQVD 58 +++VTG GFIGS L L+ + K++ V + G L+S+ KEI N D Sbjct: 3 KVLVTGADGFIGSHLTEILIKEGYKVKAFVNYNSFNSWGWLDSIDKEII--NEIEIFSGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D ++ ++K + + + AA + S D ++ TNI GT +L+ R + Sbjct: 61 IRDPNGVKVSMKGIE--EVYHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQAARELETS- 117 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R L ST EVYG+ E PY SPYSATK +D L ++ ++ +P Sbjct: 118 --------RVLITSTSEVYGTAKYIPIDELHPYQGQSPYSATKIGADRLAESFYRSFNMP 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + N YGP +IP IT+++ G G RD+ YV+D V + + Sbjct: 170 ISIVRPFNTYGPRQSARAVIPTIITQLLSGEKQIKLGALSPTRDFNYVKDTVNGFIKIAQ 229 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGHDRRY 294 K IGE NI +E IG L + LI + E++ + I R Sbjct: 230 SKKTIGEEINIATQHE-------ISIGKLAEELIKQINPSAEIVCDEQRIRPEKSEVNRL 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + KIK W Q E G+ +TV W+ Sbjct: 283 LGSNEKIKKLTDWEVQYTFEKGIKETVEWF 312 >gi|27381100|ref|NP_772629.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] gi|27354266|dbj|BAC51254.1| blr5989 [Bradyrhizobium japonicum USDA 110] Length = 339 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 35/339 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSFLQV- 57 R++VTG GFIGS ++V +L + + Y + NS L + + S V Sbjct: 8 RVLVTGSDGFIGS----HVVEELVKAGARVKAIVYYNSFNSWGWLDTVPADVMKSVEVVA 63 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +A +++ AA + S + D ++ TN+ GT +L+ RL Sbjct: 64 GDIRDPHFMIAAASGCTD--VLHLAALIAIPFSYVAPDSYVETNVRGTVNVLQAARL--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+Q ST EVYG+ E+ P SPYSA+K +SD + L++ ++ Sbjct: 119 ------AGVRRFVQTSTSEVYGTAQTVPIKENHPLVGQSPYSASKIASDQMALSFQASFD 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV++ N YGP +IP I+++ G G RD+ +V D R L Sbjct: 173 MPVVVIRPFNTYGPRQSARAVIPTIISQIATGKRKIRLGAVSPTRDFSFVTDTARGLIAG 232 Query: 237 L---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-- 291 L + +G+ N+G E I + + + D + T+ R RP + Sbjct: 233 LTAPAEQSVGQTINLGSGFE---ISVGATVEMIADVMGVDIEIETDEARL---RPANSEV 286 Query: 292 RRYAIDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 R D+SK + ++GW P+ E M G+ TV W+ + Sbjct: 287 ERLWADNSKARQQLGWAPEFGGLEGMRRGIENTVSWFTN 325 >gi|158333592|ref|YP_001514764.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris marina MBIC11017] gi|158303833|gb|ABW25450.1| NAD-dependent epimerase/dehydratase family protein, putative [Acaryochloris marina MBIC11017] Length = 323 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 30/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 MR++VTG AGFIG L + L+ D + QV ID L YA +L + L ++ + F F Sbjct: 1 MRVLVTGAAGFIGYHLSQRLLLD-RAQVFGIDNLNNYYAVDLKKSRLAQLEPNQNFQFQC 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + + D +++ AA++ V S+ ++ +N++G +LE R S Sbjct: 60 LDLSDRNGMETLFESNTFDGVIHLAAQAGVRYSLDNPHAYVDSNLVGFLHILEGCR--QS 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +S + S+ VYG+ K FS ED +P S Y+ATK S++ + ++ H Y Sbjct: 118 NISH-------LVYASSSSVYGANKKVPFSVEDNVDHPVSLYAATKKSNELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP+ YGP+ P+ + + + +Y G+ RD+ Y++D V + Sbjct: 171 QIPITGLRFFTVYGPWGRPDMAYFKFVDAIANNKSIDVYNHGKMQRDFTYIDDVVEGIVR 230 Query: 236 VLKKGRIG-------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VL + + YNI GNN+ + E+ I + T F+ +P Sbjct: 231 VLHQPPNPDTTTPPYKLYNI-GNNQPVTLMRFIEV-------IETAMGKTADKNFLPMQP 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G D + +++G+ P+ +E G+ K V WY Sbjct: 283 GDVPATYADVDALMNDVGFQPKTPIEDGIQKFVTWY 318 >gi|28378727|ref|NP_785619.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] gi|300768245|ref|ZP_07078150.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180919|ref|YP_003925047.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271564|emb|CAD64469.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] gi|300494309|gb|EFK29472.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046410|gb|ADN98953.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 313 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 16/257 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L +LV +V+V+D L+ G ++++K Q ++ D+C Sbjct: 1 MKALVTGGAGFIGSHLVDHLVES-GFEVVVVDDLSM-GAISNIKHWEQITIYV---ADVC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ L + +PD I AA + V SI E N F LLE R + Q Sbjct: 56 DDKFMQQLLADERPDYIYFLAAIASVADSIERPAETHAVNHTAVFNLLEHIRQIRLPIKQ 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG+L + ED P SPY+ K +++ VLA+G Y +P + Sbjct: 116 -------FLFTSSAAVYGNLPELPKREDSRVAPVSPYAIDKYATERFVLAYGELYDLPTV 168 Query: 181 LSNCSNNYGPYHFPEKL---IPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P + +T ++ F L+GDG RD++YV D ++AL+L+ Sbjct: 169 CVRFFNVYGPRQNPSSPYSGVLSILTDCLKTQRPFTLFGDGTQTRDFVYVSDVIKALWLI 228 Query: 237 LKKGRIGERYNIGGNNE 253 + E NI E Sbjct: 229 TEHQVQHEVINIANGLE 245 >gi|294506530|ref|YP_003570588.1| UDP-glucuronate 5'-epimerase [Salinibacter ruber M8] gi|294342858|emb|CBH23636.1| UDP-glucuronate 5'-epimerase [Salinibacter ruber M8] Length = 325 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 160/336 (47%), Gaps = 34/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M ++VTGGAGFIG +CR LVN+ I V ID Y ++ ++++ + + F F + Sbjct: 1 MHILVTGGAGFIGGHVCRRLVNEGHI-VSAIDNFDPYYDRSIKEEGIRDLHEHSNFHFHE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRL 113 DI + + S DAIV+ AA++ V SI +G F NI GT +LE R Sbjct: 60 GDINNTGFLLSIKDGHSIDAIVHLAAKAGVRASIENPVGCAHF---NITGTQSMLEFAR- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWG 172 + + D F F S+ VYG+ +K F+E D +NP SPY+A+K S + + + Sbjct: 116 ------EMEVDTFLFG--SSSSVYGNNEKVPFAEEDAVHNPISPYAASKRSGELIAHTYH 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y + V YGP P+ I +++ G + +YGDG + RD+ Y++D V Sbjct: 168 HLYDMTVHCLRFFTVYGPRQRPDLAIHKFARQLLMGDPITMYGDGTSSRDYTYIDDIVDG 227 Query: 233 LYLVLKKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + L +G E N+GG+ K +++ IG + + P+ I+ + Sbjct: 228 VTSSLHRGHALEEPEYEIINLGGSETTKLRELIEGIGRAM-GIEPE-------IKQLPMP 279 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G R D SK + + P ++ GL K W Sbjct: 280 AGDVERTYADISKAGELLDYSPDTPIDEGLEKFAEW 315 >gi|317130294|ref|YP_004096576.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315475242|gb|ADU31845.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 316 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 47/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + ++L++D V+V+D L+ N +SNL + DI Sbjct: 1 MNVLVTGGAGFIGRWVVKHLLHDGH-NVVVLDDLSNGQKKNLADFKDKSNLLEVVIGDIK 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S ++ D + A +V SI + +GTF ++E+ R Sbjct: 60 DEQLLDSLFSKYSFDICYHLGASINVQDSIDDPRTTFNNDTVGTFYVMEQCR-------- 111 Query: 121 DKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + +ST VY LD+ +E P P+SPY+ K +++ +VL++ Y +PV Sbjct: 112 --KHLVKVVFMSTCMVYDRCLDETGITEQHPTKPASPYAGAKIAAENMVLSYFFAYDLPV 169 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ N YGP+ ++ + I + +EG + +YGDG RD L+VED A ++V Sbjct: 170 VVVRPFNTYGPFQKTGGEGGVVAIFIKKKLEGESLHIYGDGTQTRDLLFVED--CANFVV 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI---EDRPGHDRR 293 G +E+ N G +++A + + S +L + I E+R H Sbjct: 228 Q-----------AGYSEKVN-------GEVINAGLGRDISINDLAKLIVEDENRIKHVEH 269 Query: 294 YAIDS---------SKIKSEIGWFPQENMESGLNKTVCW 323 S K +GW P+ ++E G+ +T W Sbjct: 270 IHPQSEIQKLLSNYEKAHLLLGWKPKVSLEEGIKRTEDW 308 >gi|225175766|ref|ZP_03729759.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] gi|225168690|gb|EEG77491.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] Length = 337 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 160/347 (46%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ D QV+ ID L Y +L L + + N F+F + Sbjct: 1 MKILVTGAAGFIGFHLSKKLL-DQSYQVIGIDSLNDYYDPSLKQSRLDILRKCNNFNFHK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ D+ + + + +QP ++N AA++ V SI ++ +N+ G +LE R + Sbjct: 60 VDLKDKAEVDNIFETYQPTHVINLAAQAGVRYSIENPYAYVDSNLTGFMNILEACRNYPV 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG FS + + P S Y+ATK S++ + + H Y Sbjct: 120 E---------HLLYASSSSVYGGNKVVPFSTNHNVDHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ +++G+ + ++ G+ RD+ Y++D V + Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMAYFSFTKDILKGTPIKVFNHGKMERDFTYIDDIVEGIVK 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ K + YNIG NN ++ ++AL Sbjct: 231 LIDKVPTANKEWDESKDDLSTSFAPYKIYNIGNNNP-------VQLMRFINALESALGRE 283 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E + +++ +PG R D S ++ +I + P ++E GL K V WY Sbjct: 284 AEKV-YVDMQPGDVHRTYADVSDLERDINFKPSISIEDGLAKFVDWY 329 >gi|170290383|ref|YP_001737199.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174463|gb|ACB07516.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum cryptofilum OPF8] Length = 311 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 151/329 (45%), Gaps = 35/329 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IV+GGAGFIGS L+ +L++ V VID Y+G+ +L+ + L VDI D Sbjct: 2 IIVSGGAGFIGSHTVDELL-ELRMDVCVIDNF-YSGSPENLRGYEK---LRILNVDIRDF 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I +K + + I++ AA +D + TN +GT +LE R K Sbjct: 57 NSIFEGIKG-EVEGIIHLAAIVSLDEARANPKLAFETNFLGTLNMLELAR---------K 106 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D RF+ S+ VYG E P P++ Y +K + L +++ YGI V+ Sbjct: 107 LDVGRFVYASSVAVYGEPVYLPIDESHPLKPANLYGLSKLMGEQLAMSYMEEYGIDVVAL 166 Query: 183 NCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRALYL 235 N YGP ++ + IT ++ G V ++GDG RD++YV+D +V++L+ Sbjct: 167 RYFNVYGPRMRSGPYSGVVHIFITSLLRGEPVRIFGDGDQTRDFVYVKDVAKANVKSLFS 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +K +N+G E +++ I LL Y R G RR Sbjct: 227 NVKGA-----FNVGTGVETSINELLSLISDLLGVRAEVKYESP--------RKGDVRRSR 273 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + I+ IGW P+ + GL +T+ WY Sbjct: 274 ASAEAIREAIGWTPEVGIREGLKRTIEWY 302 >gi|307823473|ref|ZP_07653702.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307735458|gb|EFO06306.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 328 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 136/321 (42%), Gaps = 31/321 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L R L ++ VID L+ G ++ ++ F F Q+DI Sbjct: 1 MKVLVTGGAGFIGSHLSRELWRQGH-EIKVIDNLS-GGRKETIADLLDQPNFEFHQLDIR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I + D + + A + + SI + TN+ GTF +LE R Sbjct: 59 DAEAIMPLFADV--DWVFHLAGLADIVPSIERPRAYYETNVSGTFNVLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF+ ++ YG ++ E P PY+ TK + LV+ W Y +PV+ Sbjct: 109 -DANVKRFVYAASSSCYGLAEQFPTPETAAIKPQYPYALTKYLGEELVMHWAQLYQLPVV 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP+ + + + + I + GDG RD+ YV D A Sbjct: 168 SLRLFNVYGPHARTTGAYGAVFGVFLAQKINNKPFTVVGDGTQTRDFTYVTDVANAFIAA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GE N+G + +G L A I +I RPG Sbjct: 228 ANSDICGEIMNVGSGG---TYSVNHLVGLLGGA-----------IEYIPKRPGEPDCTFA 273 Query: 297 DSSKIKSEIGWFPQENMESGL 317 D+ KIK ++ W PQ + E G+ Sbjct: 274 DTGKIKEKLDWQPQVSFEQGV 294 >gi|194335671|ref|YP_002017465.1| NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1] gi|194308148|gb|ACF42848.1| NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1] Length = 332 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 33/336 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQV 57 +++TG GFIGS L LV Q + + + NS + Q F Sbjct: 4 VLITGADGFIGSHLTEALVR----QGYNVRAFVFYNSFNSWGWLDQCATDIKGKFEVFAG 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D ++ A+K D +++ AA + S ++ TNI GT +L+ R Sbjct: 60 DIRDPHGVKEAMKGC--DVVLHLAALIAIPYSYHSPYTYVDTNIKGTLNVLQAAR----- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + ST EVYG+ +E+ P SPYSATK ++D L ++ ++G+ Sbjct: 113 ----ELGVKKIVHTSTSEVYGTARFVPITEEHPLQGQSPYSATKIAADQLAYSFFASFGL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+++ N YGP +IP IT++ G+ G + RD+ YV+D V + Sbjct: 169 PVIIARPFNTYGPRQSARAVIPTIITQIANGNRQIKLGAVRPTRDFNYVQDTVAGFIAAM 228 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRY 294 K + +GE N G N E D V I +++ I L RP + R Sbjct: 229 KSNQGLGEVVNFGSNFEISIGDTVQLIAEVMNTKIEIITDEDRL------RPANSEVERL 282 Query: 295 AIDSSKIKSEIGWFP----QENMESGLNKTVCWYLD 326 D+SK GW P +E + GL +T W+L+ Sbjct: 283 WADNSKASQLFGWEPSYGGREGFKRGLAETAEWFLN 318 >gi|251771726|gb|EES52301.1| UDP-glucose 4-epimerase [Leptospirillum ferrodiazotrophum] Length = 312 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 28/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + R LV K V + D + G ++++++ + D+ Sbjct: 1 MSILVTGGAGFIGSHIARTLVARGK-AVRIFDNFS-TGKKENIEDLAGKA--EVVHGDLR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + SAL + + AA V RSI E T N+ GT LL W C Sbjct: 57 DMKILESALSGVT--QVYHQAAVGSVPRSIADPFETQTANVNGTLNLL------WKCREA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + + VYG E + P SPY+ +K S + + TYG+ + Sbjct: 109 GVR---RVVIAGSSSVYGDTPGMPRVETLLPAPLSPYALSKLSQEMFGRIFTKTYGLETV 165 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GPY P+ +IP I MI G+ V + G G+ RD+ +VE+ V A L Sbjct: 166 TLRYFNIFGPYQDPDSEYAAVIPRFIRAMITGAPVTINGTGEQSRDFTFVENAVEANILA 225 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +GE +N+G + +D+V + +L T IR R G Sbjct: 226 METTSGVGEAFNVGCGSSYSILDLVKALSEILKV--------TPEIRHNPPRAGDPAASL 277 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK ++ +G+ P+ GL +T W+ Sbjct: 278 ADISKARAHLGYEPRVFFREGLERTAAWF 306 >gi|309790345|ref|ZP_07684911.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] gi|308227611|gb|EFO81273.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] Length = 339 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 MR ++TGGAGFIG L L+ + QV V+D L+ +L + Q + F+ D Sbjct: 1 MRHLITGGAGFIGCNLADTLLARGE-QVTVLDNLSRPRTDLNLAWLQQRYGSRMHFIHAD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL----- 113 I D E + +A+ D + + A++ V S+L N +G+F +LE RL Sbjct: 60 IRDAEAMHAAVPGH--DTVFHLASQVAVTTSVLDPRTDFEINALGSFNILEAARLAPHPP 117 Query: 114 --WWSCLSQ--DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 ++S ++ + ++ T Y L KG+ SE + SPY +K ++D V Sbjct: 118 IIFYSSTNKVYGGMEHVGVVEQPTRYAYRDLPKGV-SETNLLDFHSPYGNSKGAADQYVR 176 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + YG+ ++ S YGP + + + G + +YGDG+ VRD LY+ Sbjct: 177 DYARIYGLQTVVFRQSCIYGPRQMGVEDQGWAAHFVIAAVTGRPITIYGDGKQVRDMLYI 236 Query: 227 EDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +D + A L++ G YNIGG + + E G LL+ L +R+ Sbjct: 237 DDLIAAYLAALERIDQVSGHIYNIGGGPSNA-LSVWAEFGPLLEELTGNQIE----VRYG 291 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 RPG Y K ++E+GW PQ ++ G+++ V W Sbjct: 292 NWRPGDQPVYISAIEKAQAELGWQPQISVIEGMSRLVAW 330 >gi|188590569|ref|YP_001920841.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum E3 str. Alaska E43] gi|188500850|gb|ACD53986.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum E3 str. Alaska E43] Length = 329 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 23/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS LC L+ N ++ V + G L+SL + +S + F DI Sbjct: 4 KVLVTGADGFIGSHLCELLLENGYDVRAFVYYNSFNSWGWLDSLDKNKKSKIDIF-SGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R A+K D + + AA + S D ++ TNI GT +L+ +R Sbjct: 63 RDPNGVREAMKGI--DEVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R L ST EVYG+ E+ P+ SPYSATK +D + ++ ++ +P+ Sbjct: 114 --ELNTKRILITSTSEVYGTAKYVPIDENHPFQGQSPYSATKIGADRIAESFYRSFDLPL 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP IT+++ G G RD+ YV+D + + K Sbjct: 172 TIVRPFNTYGPRQSARAVIPTIITQLLCGEKQIKLGSLTPTRDFNYVKDTANGFFEISKS 231 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IGE NI + E D+ EI + DA I E +R R Sbjct: 232 EKTIGEEINIATSKEISIKDLASEIIRQINKDATI---ICDEERLR---PEKSEVNRLLG 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + KIK W P+ G+ +T+ W+ Sbjct: 286 SNEKIKKLTNWEPKFTFAEGIKETIDWF 313 >gi|311739614|ref|ZP_07713449.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305430|gb|EFQ81498.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] Length = 328 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 42/325 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V +ID + GN ++ E ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLVEQGHDVTIIDNFS-TGNHEAVPEAAR-----VIEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ L E + +++FAA S V S+ DE+ N++ T LL R Sbjct: 54 DKAA--EVLGEGGFEGVIHFAARSLVGESVEKPDEYWQHNVVTTLTLLNAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG D+ +EDMP P++PY ATK + DY++ ++ H YG+ Sbjct: 104 -DNDVKNLVFSSTAATYGEPDQVPITEDMPTQPTNPYGATKLAIDYMITSFAHAYGLGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIP+ + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPIVLQVALGHRDKIFMFGDDWDTADGTPVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L+ G YN+ G+ + ++ V E + K H Sbjct: 223 RDLADAHVLALESNESGTHRIYNL-GSGDGDSVKQVIE-------MCRKVTGHDIPAEVA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S KI+ E+GW P Sbjct: 275 PRRAGDPATLIASSEKIQRELGWNP 299 >gi|57640939|ref|YP_183417.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] gi|57159263|dbj|BAD85193.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] Length = 308 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 33/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ D V++ID L Y G KE + ++ DI D Sbjct: 7 VVVTGGAGFIGSHIAWELIKDN--DVVIIDNL-YTG-----KEENVPPGAKLVKADIRDY 58 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I + D + + AA+ V SI N++GT +++ + L Sbjct: 59 EAIAELIS--NADYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNIIK------ALLEGHG 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K F S+ VYG E P SPY TKA+++ + + YG+PV+ Sbjct: 111 KLIFA----SSAAVYGDNPNLPLKETERPRPLSPYGVTKATAEEYLRVFHELYGLPVVSL 166 Query: 183 NCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP + +I + I R ++G + ++GDG+ RD++YV+D V+A LV + Sbjct: 167 RYFNVFGPRQSTNQYAGVISIFINRALKGEPLVIFGDGKQTRDFIYVKDVVKANLLVAES 226 Query: 240 GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G +N+ E +++ +I + T + F + RPG R D Sbjct: 227 RKANGRVFNVATGRETTILELAMKIIEITGT--------TSSVVFDKPRPGDIRHSRADI 278 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 S+I+ ++G+ P+ ++E GL KTV WY NN Sbjct: 279 SEIR-KLGFEPEWSLEEGLKKTVEWYAKNN 307 >gi|254390054|ref|ZP_05005275.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294813513|ref|ZP_06772156.1| Putative GDP-D-mannose dehydratase [Streptomyces clavuligerus ATCC 27064] gi|326442080|ref|ZP_08216814.1| NAD-dependent epimerase/dehydratase [Streptomyces clavuligerus ATCC 27064] gi|197703762|gb|EDY49574.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294326112|gb|EFG07755.1| Putative GDP-D-mannose dehydratase [Streptomyces clavuligerus ATCC 27064] Length = 316 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 151/333 (45%), Gaps = 36/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVD 58 M++ +TGGAGFIGS L R L KI ++ VID NL++ + S + L F + D Sbjct: 1 MKIAITGGAGFIGSNLARVLTEQPKITRIQVID------NLSTGSKTSIAGLGIDFFEGD 54 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + + + DA+V+ AA V RSI N GT +LE R Sbjct: 55 IQDADLLDQVFRGA--DAVVHLAALPSVPRSIRDPLASHQANATGTLQVLEAAR------ 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + S+ VYG+ + ED+ P SPY+ TK +++ + A+ H+ +P Sbjct: 107 ---RAGGLQVIAASSSSVYGANPRLPKHEDLTTAPMSPYAVTKLATEAYLGAYHHSLDLP 163 Query: 179 VLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 VL N YGP H +IP I+ ++G V ++GDG RD+ YV R L Sbjct: 164 VLPFRFFNVYGPGQRADHAYAAVIPKWISAALDGRPVTVHGDGTQTRDFTYVGTVCRVLT 223 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L RI E + +++ F L LIP+ + T + E P Sbjct: 224 EALLH-RI---------VEPRPVNLAFGTRVSLLDLIPEVETATGRVVHREHMPARTGDV 273 Query: 295 A---IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 A DSS++++ +E G++ TV W+ Sbjct: 274 AHSQADSSRLRALFPTVAPVALEDGVSATVDWF 306 >gi|301301031|ref|ZP_07207192.1| RmlD substrate binding domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851388|gb|EFK79111.1| RmlD substrate binding domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 359 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 170/367 (46%), Gaps = 65/367 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEIS------QSN 50 R+++TGGAGFIG+ L L+ +K + +L +D + Y +L L++I + + Sbjct: 10 RILITGGAGFIGANLILSLLQTVKSVNILTVDNINDYYDVSLKEWRLQQIESEATQHEES 69 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F++ DI D + +F+PD +VN AA++ V SI D +I +NIIG++ +LE Sbjct: 70 KFEFIKGDISDVGLVNQIFADFKPDIVVNLAAQAGVRNSITNPDAYIKSNIIGSYNILEA 129 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKAS 163 R + +++ + F S+ +YG+ +++PY P S Y+ATK S Sbjct: 130 CRHSYD--NENGVEHLVFA--SSSSIYGN------GKEIPYKTDSNTDKPISLYAATKKS 179 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGP--------YHFPEKLIPLAITRMIEGSHVFLYG 215 + L + + +GIP+ YGP + F +KLI E +F YG Sbjct: 180 DEMLAHVYSYLFGIPITGLRFFTVYGPGGRSDMAYFKFTKKLIN------DEKIQIFNYG 233 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGER-----------YNIGGNNERKNIDIVFEIG 264 + + RD+ Y++D V + V+ + E+ YNIG ++ ++ V Sbjct: 234 NCR--RDFTYIDDVVEGVKRVMSG--VPEKSEQDLEPAYRIYNIGNHHPENLMEFV---K 286 Query: 265 FLLDALI-----PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 L D L+ PK Y + + +PG D S+++ + + P + GL K Sbjct: 287 ILQDELVRANVLPKDYDFEGHMELVPMQPGDVAVTYADISELEKDFNFKPDTRLRVGLRK 346 Query: 320 TVCWYLD 326 WY D Sbjct: 347 FAEWYRD 353 >gi|268316875|ref|YP_003290594.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] gi|262334409|gb|ACY48206.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] Length = 310 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 28/326 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS + L+ + +V ++D + +S +E + ++D+ D Sbjct: 3 KVLVTGGAGFIGSHVADALL-ERGYEVHILD------DFSSGREENVPAGAVVHRMDVRD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E P +++ AA+ V RS+ NI+G L+E R Q Sbjct: 56 EAVADLFARERFP-ILIHHAAQMDVRRSVADPKFDADVNIMGLLNLMEAGR-------QH 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F + +YG D ED P P SPY TK +S+ + + YGIP + Sbjct: 108 GLQKVIFAS-TGGAIYGEPDYVPQDEDHPVRPLSPYGITKLASEKYLYFYEQQYGIPYVA 166 Query: 182 SNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP P ++ + RM+EG +YG G+ RD++YV D V A L Sbjct: 167 LRYANVYGPRQNPHGEAGVVAIFTQRMLEGKQPVIYGSGEQTRDFVYVGDVVEANLAALA 226 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +NIG E + + L++ +P+ + E +PG +R + Sbjct: 227 YPGSGV-FNIGTGIETSVNQLFRTLRDLINPEVPEVHG--------EAKPGEQQRSVLGY 277 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 + + E+GW P+ +++ GL +TV W+ Sbjct: 278 ERARRELGWEPRVSLQEGLRRTVEWF 303 >gi|126178709|ref|YP_001046674.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125861503|gb|ABN56692.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 311 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 30/334 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR IVTGGAGFIGS L L D +V++ D L+ AG +++ + +F++ + Sbjct: 1 MRYIVTGGAGFIGSNLAERLARDGH-EVVIFDDLS-AGRRENIEHLLVHPRVTFVEGSVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A D I + AA + V RS+ E N+ GT +L W+ Sbjct: 59 DLALLVDACA--GADGIFHQAAVASVPRSVANPLETNEVNVTGTLNVL------WAA--- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ST +YG D +F E M P SPY+ +K + ++ + YGI Sbjct: 108 KECGVPAVVAASTSAIYG--DDPVFPKCETMAPGPLSPYAVSKLAGEHYGKVFADLYGIR 165 Query: 179 VLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +GP P +IP ITR++ +YGDG+ RD+++V D VRA Sbjct: 166 TVFLRYFNVFGPRQDPNSEYAAVIPKFITRLLGDKPPIIYGDGEQTRDFIFVGDVVRANI 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++ G G +NI G + + L L + H + + RPG R Sbjct: 226 QAMEGGASGV-FNIAGGSR-------ISLNHLASILAEITGIHHRPV-YEPPRPGDVRDS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + ++ + G+ P+ +E+GL +TV W+ D Sbjct: 277 LAEITRARDAFGFSPRCTLEAGLRETVAWFRDGG 310 >gi|319641648|ref|ZP_07996332.1| NAD-dependent epimerase/dehydratase [Bacteroides sp. 3_1_40A] gi|317386731|gb|EFV67626.1| NAD-dependent epimerase/dehydratase [Bacteroides sp. 3_1_40A] Length = 324 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 30/330 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS LCR L+ND + + +D L G + ++K++ F F++ DI Sbjct: 10 ILVTGGAGFIGSNLCRKLIND-GVSIWCLDNLI-TGKIENVKDLLHCERFHFIEQDI--- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + DAI+N A+ + + + T+++G + LL+ K Sbjct: 65 KTFDFKILPSDIDAIINLASIASPKAYYARPIDTLLTSVLGVYNLLQYA----------K 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHTYGI 177 K+ LQ ST EVYG + +E N P + Y K +++ L + + Y + Sbjct: 115 KEDIVLLQASTSEVYGDPACDILNESYCGNVSCTGPRACYDEGKRTAETLCMDYHRLYNV 174 Query: 178 PVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V + N YGPY + IP I R + + +YGDG+ R ++Y++D + A+Y Sbjct: 175 KVKIIRIFNTYGPYMDICDGRAIPEFIYRSLHNRDLIIYGDGKQTRSFMYIDDLLEAIYN 234 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+ I NIG NE I V E I ++ I + E + Sbjct: 235 VMNLDDIYTYPINIGNPNEEYTISEVAET-------IIRTLDSKSKIIYKEKLQDDPYKR 287 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +KI ++ W P +++ GL KT+ ++ Sbjct: 288 KPDITKIITKTNWRPLVSLKEGLLKTIDYF 317 >gi|284046756|ref|YP_003397096.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283950977|gb|ADB53721.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 309 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 87/326 (26%), Positives = 152/326 (46%), Gaps = 28/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR IVTGGAGFIGS L L+ V V+D L+ G +L ++ ++D+ Sbjct: 1 MRAIVTGGAGFIGSNLVDGLLA-AGHAVAVVDDLS-TGRRENLAADAR-----LHELDVL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +A +P+ + + AA+ V RS+ + + N+ GT +L R + Sbjct: 54 DTAALNAAFAHERPEVVFHLAAQIDVRRSVEDPAQDLRVNVEGTVNVLNAARAAGARRV- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +YG D ED P P +PY A+K +++ + + +G+ + Sbjct: 113 -------VFSSTGGAIYGDADVLPTGEDAPLRPLAPYGASKHAAEGYLGVFSALHGLSTI 165 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN YGP P ++ + + G+ ++GDG+ RD+++V D VRA L+ Sbjct: 166 ALRYSNVYGPRQDPLGEGGVVAIFCGALATGATPTIFGDGEQTRDYVFVGDVVRA-NLLA 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G +NIG E +D+V + G A + ++S R G R + Sbjct: 225 ASSELGGAFNIGSGVETSVLDLVDHLNGVGGGAGLTPTHSPA--------RQGEVARSCL 276 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVC 322 D S+ +S++GW P+ +++ GL +T+ Sbjct: 277 DPSRARSQLGWGPEVDLDEGLRRTLA 302 >gi|218296609|ref|ZP_03497327.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] gi|218242922|gb|EED09455.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] Length = 310 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 35/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS + L+ + ++V V+D NL++ K + F QVD+ Sbjct: 1 MRVLITGGAGFIGSHIAEALLRE-GLEVAVLD------NLSTGKRENVPPGVPFYQVDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +EF+P + + AA++ V S+ N++G LLE R + Sbjct: 54 DGEGVERVFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACR-------R 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ F + +YG + +G +E+ P P SPY+A+KA+ + + A+G YG+ Sbjct: 107 HGVEKLVFAS-TGGAIYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLRW 165 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHVR 231 + N YGP P ++ + R+++G V LY GD VRD++YV D Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGEPVTLYARRTPGDEGCVRDYVYVGDVAE 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L L + YN+G +++ L A+ + E++ RPG Sbjct: 226 AHTLALLS--LEGVYNVGTGEGHTTLEV-------LKAVAEAALKTPEVVH-APPRPGDL 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + K+ + GW P+ G+ TV Sbjct: 276 ERSVLSPLKLMAH-GWRPRVGFREGIRLTV 304 >gi|108804076|ref|YP_644013.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108765319|gb|ABG04201.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 331 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 96/343 (27%), Positives = 145/343 (42%), Gaps = 31/343 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYA-----GNLNSLKEIS------- 47 M +VTGG GFIG+AL R L + V V+D L+ G +E+S Sbjct: 1 MNWLVTGGCGFIGTALVRSLAQEGGGHAVRVVDNLSVGTREDLGAACGFREVSPEGAGPL 60 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 + + DI D R + +V+ AA + V S+ TN++GT Sbjct: 61 EGEGVELVVGDILDEGLARRVCA--GAEVVVHLAASTGVAPSVEDPRRDCVTNVLGTLNY 118 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE + RF+ S+ G ++ + P P SPY A K + + Sbjct: 119 LE---------AARAAGARRFVFASSGAAAGEVEPPIHEGVCP-RPVSPYGAGKLAGEAY 168 Query: 168 VLAWGHTYGIPVLLSNCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 A+ TYG+ + N YGP ++ I R G + +YGDG RD++Y+ Sbjct: 169 CSAYWRTYGLETVALRFGNVYGPGSGHKNSVVARFIRRAARGEVLEIYGDGTQTRDFIYI 228 Query: 227 EDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 +D VRAL L G + GE + I +E ++V LL L + R Sbjct: 229 DDLVRALRLAATAGGVGGEVFQIATGSETSVGEVVE---LLLPVLAAAGIKGVRVER-AS 284 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 RPG R D+SK + +GW + +E GL +TV W+L+ Sbjct: 285 PRPGDVARNYADTSKARRLLGWRAEVGLEEGLRRTVGWFLERG 327 >gi|223934755|ref|ZP_03626675.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223896710|gb|EEF63151.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 360 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 95/339 (28%), Positives = 163/339 (48%), Gaps = 38/339 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ D K V+ +D + G L +L+E ++ F FL Sbjct: 19 LITGVAGFIGSNLLEMLL-DAKQNVVGLDNFS-TGKLQNLEEALRSVQPAEQKRFQFLAG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLW 114 DI + R A ++ D +++ AA V +S+ +G++E N+ G +L+ R Sbjct: 77 DIRNLATCRHACEKV--DYVLHQAALGSVPKSVEDPIGSNEI---NVTGFLNMLQAAR-- 129 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF+ ++ VYG + E NP SPY+ TK +++ + T Sbjct: 130 -------ENKVRRFVYATSSAVYGDSPELPKVESRLGNPLSPYAVTKLINEFYADVFTRT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ + N +GP PE +IP + MI+ +YGDG RD+ +V + V Sbjct: 183 YGMETIGLRYFNVFGPRQDPEGPYAAVIPRWVAAMIKNEPTVIYGDGSTSRDFCFVANVV 242 Query: 231 RALYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--LIRFIE 285 +A L G +G+ +N+ N+ NI ++ E+ +L + +++ H + R+++ Sbjct: 243 QANILAATTGNPEALGKVFNVALNS---NISLM-ELFEMLRYKLVRTFPHLQDYKPRYLD 298 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RPG R D +K +G+ P ++E GLN + WY Sbjct: 299 FRPGDIRHSQADITKASDLLGYAPTHSVEEGLNTALDWY 337 >gi|23012819|ref|ZP_00052816.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 326 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 94/339 (27%), Positives = 152/339 (44%), Gaps = 34/339 (10%) Query: 1 MRLIVTGGAGFIG-SALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFL 55 M ++VTG AGFIG A R L + VL +D L+ Y L L+ + + FSF+ Sbjct: 1 MTVLVTGAAGFIGYHASLRLLARGQR--VLGVDCLSPYYDVRLKHTRLEHLRKHEGFSFV 58 Query: 56 QVDICDRECIRSALKEFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 Q DI DR + + P+ A +N AA++ V S+ ++ +NI G ++LE R Sbjct: 59 QADIADRSAMEEVARS-HPEVTAYINLAAQAGVRHSLTAPFDYTHSNIEGHLVMLEMARA 117 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 C F+ S+ VYG+ K FS ED P S Y+A+K S + + ++ Sbjct: 118 NPKCR--------HFVYASSSSVYGANTKLPFSVEDRVDTPISLYAASKRSGELMSHSYS 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + +P YGP+ P+ L ++ G + ++ +G RD+ Y++D V Sbjct: 170 HLFRVPTTGLRFFTVYGPWGRPDMAAYLFADAIVAGKPIKVFNNGDMRRDFTYIDDIVSG 229 Query: 233 LYLVLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 + VL + YNIG NN K +D + L+ S F Sbjct: 230 VVGVLDNPPADDGQAPPYRLYNIGNNNSEKLMDFI--------GLVESSLGRKASYDFHP 281 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D S I+ ++G+ P + G+ + + WY Sbjct: 282 MQPGDVKETYADISAIQRDVGFAPTTPISVGVPRFIEWY 320 >gi|1332591|emb|CAA66412.1| dNDP-glucose dehydratase [Streptomyces cinnamonensis] Length = 164 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 13/159 (8%) Query: 27 QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 V V+DKLTYAGN ++L +F++ DI + DA+V+FAAESHV Sbjct: 19 HVTVLDKLTYAGNRDNLPATHPR--MTFVRGDI--NDLPLLLDLLPGHDAVVHFAAESHV 74 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS 146 DRS+ A EFI TN+ GT LLE +CL + R + +STDEVYGS+ +G ++ Sbjct: 75 DRSLTAAAEFIRTNVCGTQNLLE------ACLRSGVQ---RVVHVSTDEVYGSIAEGSWT 125 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCS 185 E+ P P++PY+A+KA+SD + ++ T+G+ + ++ CS Sbjct: 126 EEWPLEPNTPYAASKAASDLVARSYWKTHGLDLSITRCS 164 >gi|323451597|gb|EGB07474.1| hypothetical protein AURANDRAFT_27982 [Aureococcus anophagefferens] Length = 329 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 30/332 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-------TYAGNLNSLKEISQSNLFSFL 55 ++VTG AGFIGS C +L+N + V+ ID++ N+ L+ + + F+F Sbjct: 16 IVVTGAAGFIGSHTCEFLLNRGE-HVVGIDEVNDYYDVRVKESNVALLERVG-GDRFTFY 73 Query: 56 QVDICDRECI-RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DICD + R +P +V+ AA + V SI ++ +N+ GT L++ Sbjct: 74 RGDICDVALLDRVWTGHGKPRRVVHMAARAGVRPSIEDPFVYVHSNVEGTTRLMD----- 128 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 +C K F+ S+ VYG + LFSE D P SPY+ATK + + L + H Sbjct: 129 VAC----KYGNDSFVFASSSSVYGGSKETLFSEKDSVDFPVSPYAATKKACELLAYTYHH 184 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLA-ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y + + +GP P+ + PL + ++ G+ + +GDG + RD+ YV+D V+ Sbjct: 185 LYKLNIAALRFFTVFGPRGRPD-MAPLKFVDKISRGAPIQQFGDGSSSRDYTYVDDVVQG 243 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + L L + YN+G + K D + AL+ ++ I + ++PG Sbjct: 244 IVLSLDTPLGYQVYNLGNGSPTKLGDFI--------ALVEEATGRKAEIEILPEQPGDVP 295 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK + +G+ P+ G+ K V WY Sbjct: 296 RTCADISKARELLGYDPKTPFPEGIRKLVAWY 327 >gi|298245004|ref|ZP_06968810.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] gi|297552485|gb|EFH86350.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] Length = 316 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGF+GS LC+ L+++ VL D G+ ++ ++ F F+Q D+ Sbjct: 1 MKIVVTGGAGFVGSHLCKRLLDEGHT-VLCADNCI-TGSTRNIDDLRTHPNFQFIQHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +++ DAI + A+ + + E I N GT +LE R Sbjct: 59 EP-------FDYEADAIFHMASPASPIGYMEHPIETILVNTQGTHRMLEAAR-------- 103 Query: 121 DKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K+ RFL ST E+YG +G + P P + Y +K S+ L + + Y Sbjct: 104 --KNNARFLVSSTSEIYGDPLVHPQTEGYWGNVNPIGPRACYDESKRLSETLTMEFVRQY 161 Query: 176 GIPVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + N YGP ++IP IT+ ++ + +YGDG R YV D + L Sbjct: 162 NVNARIVRIFNTYGPNSQIHDGRMIPNFITQALKNEPLVIYGDGSRTRSICYVSDLIDGL 221 Query: 234 YLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + GE +N+G NE ++ EI L ++ I F R Sbjct: 222 MRAMFSENTQGEVFNLGNPNEHTVLEYAHEIIKLCNS--------RSTILFEPVRVDDPE 273 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K + +GW P+ + GL +T+ W+ Sbjct: 274 RRRPDITKARRVLGWEPRIEKKEGLRQTIAWF 305 >gi|89897186|ref|YP_520673.1| hypothetical protein DSY4440 [Desulfitobacterium hafniense Y51] gi|219666948|ref|YP_002457383.1| NAD-dependent epimerase/dehydratase [Desulfitobacterium hafniense DCB-2] gi|89336634|dbj|BAE86229.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537208|gb|ACL18947.1| NAD-dependent epimerase/dehydratase [Desulfitobacterium hafniense DCB-2] Length = 328 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 28/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV D+++ + + GNL L E S N + D Sbjct: 6 KVLVTGAGGFIGSHLTEALVKAGADVRV-FIRYNSRDGRGNLEDL-EPSLLNQIEIIAGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + I A+K D + + AA + S E + TNI GTF +L R Sbjct: 64 LRDADVIDRAVK--GNDVVFHLAALVGIPYSYKNPREVVETNIFGTFNILIAGR------ 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST EVYGS E+ P SPYSA+K +D L ++ +Y +P Sbjct: 116 ---DHEVSRVVSTSTSEVYGSAQYVPIDENHPLQGQSPYSASKIGADKLAESFYASYNLP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 V N YGP +IP IT+ + S + L G+ + RD+ +V D V + L Sbjct: 173 VATIRPFNCYGPRQSARAIIPTLITQALASSEIKL-GNLEAKRDFTFVSDTVAGFMAAAL 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDR--RY 294 +G+ N+G E IG L ++ + S +L+ E RP R Sbjct: 232 SPKTVGKVINVGSGQE-------ISIGELAQIILETTQSSAKLVIDQERVRPSKSEVNRL 284 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 DS K + W PQ ++ G+ KT+ W N Sbjct: 285 LADSRLAKEIMDWEPQVSLTEGILKTMAWIEKN 317 >gi|282864495|ref|ZP_06273550.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] gi|282560434|gb|EFB65981.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] Length = 333 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 33/333 (9%) Query: 5 VTGGAGFIGSALCRYLVN-DLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 VTG GFIGS L LV +++ + + + G L +L E + + L D+ D Sbjct: 9 VTGAEGFIGSHLVETLVAAGHRVRAMAQYNSFSSYGWLETLSEEVLAEVEIVLG-DVRDP 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + D + + AA + S ++ TN+ GT +LE R + Sbjct: 68 GSVRGFAE--GADCVYHLAALIAIPYSYRAPHSYVDTNVTGTLNVLEAVRALGTP----- 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ST E YG+ +ED P + SPY+A+KA +D L ++ ++ PV+ Sbjct: 121 ----RLVHTSTSETYGTAQTVPITEDHPIHTQSPYAASKAGADRLADSYHASFSTPVVTL 176 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR- 241 N +GP +IP I ++ G GD + RD+ YV D RA V Sbjct: 177 RPFNTFGPRQSMRAVIPTVIGQLAAGERTITLGDLRPTRDFTYVRDTARAFLAVGTADAE 236 Query: 242 --IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--R 293 +G +N G E D+V IG + + TE + ED RP R Sbjct: 237 RVVGRTFNAGTGGEISVGDLVVLIGKV---------TGTE-VDVREDAERVRPAASEVMR 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+++++ GW P ++E GL +T ++ D Sbjct: 287 LVADATRLRETTGWAPAHDLEDGLARTAAFFQD 319 >gi|308535385|ref|YP_002140510.2| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter bemidjiensis Bem] gi|308052730|gb|ACH40714.2| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter bemidjiensis Bem] Length = 327 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 154/330 (46%), Gaps = 23/330 (6%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG GFIGS L LV +++ V + G L+ E + NL F DI D Sbjct: 1 MVTGADGFIGSHLTETLVRQGYEVRPFVFYNSFNSWGWLDQAPEEIRKNLDVFAG-DIRD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R+A+K ++++ AA + S D ++ TNI GT +++ R Sbjct: 60 PHGVRTAMKGC--GSVLHLAALIGIPYSYHSPDTYVDTNIRGTLNIVQAAR--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ + + ST EVYG+ +E+ P + SPYSA+K +D + L++ ++G PV + Sbjct: 109 EEGVEKVIHTSTSEVYGTARFVPITEEHPLHGQSPYSASKIGADQIALSFYSSFGTPVTV 168 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL-KKG 240 N YGP +IP IT++ G G RD+ +V D V L Sbjct: 169 VRPFNTYGPRQSARAVIPTIITQIAAGREEIRLGSLHPTRDFNFVSDTVGGFIAALNSNA 228 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GE NIG N E + V I L+ A K ++ +R ++ +R +A D++K Sbjct: 229 GTGEVVNIGSNFEISIGETVDMIAQLMGA---KLKVVSDDVRIRPEKSEVERLWA-DNAK 284 Query: 301 IKSEIGWFP----QENMESGLNKTVCWYLD 326 + +GW P +E + GL +T+ W+ D Sbjct: 285 AERLLGWSPAYAGKEGLRRGLEETIQWFKD 314 >gi|124021826|ref|YP_001016133.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9303] gi|123962112|gb|ABM76868.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9303] Length = 335 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 23/332 (6%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYA-GNLNSLKEISQSNLFSFLQVDICD 61 +VTG GFIGS L YL+N ++ + + G L+ + + + N+ L DI D Sbjct: 8 LVTGADGFIGSHLVEYLLNKGCNVRAFCLYNSNGSWGWLDRIDKEYKKNIEVVLG-DIRD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 C+++ALK D + + AA + S + ++ TNI+GT +++ R Sbjct: 67 PICVKNALKGC--DHVYHLAALIAIPYSYMAPASYVETNIMGTLNVIQAAR--------- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + D + + ST E YG+ +ED P SPY+A+K +D + L++ ++ PV + Sbjct: 116 ELDVSKVVHTSTSETYGTAQFVPITEDHPLVAQSPYAASKIGADQIALSYWRSFETPVSV 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KG 240 N YGP +IP IT++ G G RD+ ++ D A Y V K + Sbjct: 176 IRPFNTYGPRQSCRAVIPTIITQIAGGEKRIKLGSTTPTRDFNFILDTCSAFYEVGKSEA 235 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G+ N N E I I + + DA+ + +E R +R +R + D+S+ Sbjct: 236 CVGQVVNAASNYE---ISIGETVSLIADAMGARVEISSEAERVRPERSEVNRLFG-DNSR 291 Query: 301 IKSEIGWFP----QENMESGLNKTVCWYLDNN 328 IK W P ++ + G+ +TV W+ N Sbjct: 292 IKRLTEWRPKYDGKDGFKRGIARTVEWFTKPN 323 >gi|121592841|ref|YP_984737.1| NAD-dependent epimerase/dehydratase [Acidovorax sp. JS42] gi|120604921|gb|ABM40661.1| NAD-dependent epimerase/dehydratase [Acidovorax sp. JS42] Length = 336 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 41/346 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVDI 59 +VTG AGFIG + L+ + +V+ ID L ++ L + + F+F Q+D+ Sbjct: 5 LVTGCAGFIGMHCVQRLLERGE-RVVGIDNLNAYYDVGLKHARLDRLHCQSDFTFEQIDV 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + +P +++ AA++ V SI D++ +N++G +L+ C + Sbjct: 64 ADRDAMHALFARVRPHRVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQ------GCRA 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q + + S+ VYG K FSE D +P S Y+ATK +++ + A+ H YGIP Sbjct: 118 QQVE---HLVFASSSSVYGGNAKLPFSERDAVDHPVSYYAATKKANEVMAHAYAHLYGIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 YGP+ P+ + M+ G + +YG+GQ VRD+ Y++D V + VL Sbjct: 175 TTGLRFFTVYGPWGRPDMALFKFTRAMLAGETIDVYGEGQLVRDFTYIDDIVEGVLRVLD 234 Query: 239 KGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 K + +NIG + +D + + ++ L Sbjct: 235 KPATPDAAFDPLSPSPGTGLAPYRIFNIGNSAPTLLMDYI--------QALEEALGMVAL 286 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R +PG A D S + S +G+ P + G+ + V WY D Sbjct: 287 KRMRPLQPGDMHSTAADMSALASWVGFAPHTPVRDGVARFVHWYKD 332 >gi|315652020|ref|ZP_07905021.1| UDP-glucuronate 5'-epimerase [Eubacterium saburreum DSM 3986] gi|315485667|gb|EFU76048.1| UDP-glucuronate 5'-epimerase [Eubacterium saburreum DSM 3986] Length = 363 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 163/348 (46%), Gaps = 29/348 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 ++VTG AGFIGS L L+ + ++ ID + +++ L++I + + Sbjct: 13 VLVTGSAGFIGSNLVIELLRTQPCVHIIGIDNINDYYDVSIKEWRLEQIEKVAGECSDSG 72 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 ++F++ +I D+E I E +P +VN AA++ V SI D +I +NIIG + +LE Sbjct: 73 WTFIKGNIADKELINRVFDECKPSVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEAC 132 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + + + + S+ VYGS +K +S +D NP S Y+ATK S++ L A Sbjct: 133 RHSYDNGNIGVE---HLVYASSSSVYGSNEKVPYSTDDKVDNPVSLYAATKKSNELLAHA 189 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ +++ G + ++ G+ RD+ +++D V Sbjct: 190 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLNGESIEIFNYGKCKRDFTFIDDIV 249 Query: 231 RALYLVLKKGRIGER------------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 + V+K + YNIG +N +D V + + ++ K+Y+ Sbjct: 250 EGVKRVIKSAPEKKNGNDGLPLPPYAIYNIGNSNPENLLDFVDILQQELVNAGVLSKNYN 309 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+ +++ G+ P N+ G+ K WY Sbjct: 310 FEAHKKLVPMQPGDVPITFADTKAFENDFGFKPHTNLRDGIRKFAQWY 357 >gi|282898250|ref|ZP_06306241.1| Nucleoside-diphosphate-sugar epimerases [Raphidiopsis brookii D9] gi|281196781|gb|EFA71686.1| Nucleoside-diphosphate-sugar epimerases [Raphidiopsis brookii D9] Length = 335 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 161/349 (46%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L YL+ + V+ ID L Y +L L+++ + LF+F Sbjct: 1 MKILVTGAAGFIGFHLTNYLLRQGE-TVIGIDNLNNYYDVSLKQARLEQLQPNKLFTFAH 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V++ D++ I E + DA+VN AA++ V S+ +I +NI+G +LE S Sbjct: 60 VELADQQGIDKLFTEHEFDAVVNLAAQAGVRYSLKNPHAYINSNIVGFTNILE------S 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG+ K FS D +P S Y+ATK +++ + + H Y Sbjct: 114 CRHHQVK---HLVFASSSSVYGANTKVPFSTHDNVDHPISLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++ G + ++ G+ RD+ Y++D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILSGEPIEVFNYGKMKRDFTYIDDIVEGIVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V+ G YNIG NN +++ I + + L K+ + Sbjct: 231 VITSIPQGNTSWSGDDPNPGSSKAPYKIYNIGNNNP---VELSRFIEVIEECLGIKAKKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + ++G+ P +E G+ + V WY D Sbjct: 288 -----MLPLQPGDVTMTYADVDDLIQDVGFKPATPIEVGVKRFVEWYRD 331 >gi|83589603|ref|YP_429612.1| NAD-dependent epimerase/dehydratase [Moorella thermoacetica ATCC 39073] gi|83572517|gb|ABC19069.1| NAD-dependent epimerase/dehydratase [Moorella thermoacetica ATCC 39073] Length = 323 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 25/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-- 57 M ++VTG GFIGS L LV + K++ V + + N+ + +S + ++V Sbjct: 1 MHILVTGAGGFIGSHLTEKLVREGHKVRAFV-----HYNSRNTWGWLEESEVKDDIEVFT 55 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +R++L+ + + + AA + S + +I TN+ GT+ + Sbjct: 56 GDIRDYDSVRASLRGIE--VVFHLAALIGIPYSYVTPVAYIKTNVEGTYNI--------- 104 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + ++ R + ST EVYG+ E+ P SPY+A+K +D L L++ ++ Sbjct: 105 CQAAREEGLRRVVHTSTSEVYGTARYVPIDENHPLQAQSPYAASKIGADQLALSFYRSFD 164 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV + N YGP +IP IT+++ G G+ RD+ +VED V Sbjct: 165 LPVTIIRPFNTYGPRQSARAVIPTIITQLLSGREEIRLGNLAPTRDFNFVEDTVNGFITA 224 Query: 237 -LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L +GE NIG E ++V IG L+ + K E R R Sbjct: 225 GLSPHTVGEVVNIGSGREISIGELVELIGQLIGIKV-KVRVDAERYR---PEASEVERLC 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+ K GW P+ ++ GL T+ W+ Sbjct: 281 CDNRKANRLAGWRPEYSLSQGLAITIEWF 309 >gi|172037016|ref|YP_001803517.1| nucleotide sugar epimerase [Cyanothece sp. ATCC 51142] gi|171698470|gb|ACB51451.1| nucleotide sugar epimerase [Cyanothece sp. ATCC 51142] Length = 325 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 158/344 (45%), Gaps = 42/344 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS----------LKEISQSN 50 ++++VTG AGFIG + + L++ + +L ID NLNS LK+I Sbjct: 2 VKVLVTGAAGFIGFHVSQKLLHQGE-TILGID------NLNSYYDVFLKKARLKQIKTYE 54 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F Q+DI DR+ I + D +++ AA++ V S+ ++ +N++G +LE Sbjct: 55 KFRFYQLDIADRKSISELFTQHNFDYVIHLAAQAGVRYSLENPYAYVDSNLVGFVNILE- 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 C Q+ K + S+ VYG K FS +D +P S Y+ATK +++ + Sbjct: 114 -----GCRHQNIK---HLMYASSSSVYGKNKKIPFSTDDSVDHPVSLYAATKKANELMAH 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H YGIP YGP+ P+ L ++E + ++ G+ RD+ Y++D Sbjct: 166 TYSHLYGIPTTGLRFFTVYGPWGRPDMAYFLFTKAILEEKPIKVFNYGKMKRDFTYIDDI 225 Query: 230 VRALYLVLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V + V+ + YNIG N E+G ++ L + Sbjct: 226 VEGIIHVMNNIPQSDNSSVPYKVYNIGNNQP-------VELGHFIEVL-EDCIGKKAIKE 277 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+ +PG D ++ ++G+ P ++++GL K V WY D Sbjct: 278 FLPMQPGDVPMTYADVDELIKDVGFQPNTSLKTGLEKFVNWYRD 321 >gi|212224061|ref|YP_002307297.1| UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] gi|212009018|gb|ACJ16400.1| UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] Length = 308 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 33/326 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L D +V+VID NL++ K + F++ DI D Sbjct: 6 VVVTGGAGFIGSHIAWELSKDN--EVIVID------NLHTGKRENVPPAAKFVRADIRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E I + D + + AA+ V S+ N+IGT + L Sbjct: 58 ESIAELIS--HADYVFHEAAQVSVVESVRDPIFTEEVNVIGTL----------NILRALM 105 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + S+ VYG+ E P SPY TK +++ + + YGIP + Sbjct: 106 EGHGKLIFASSAAVYGNNPNLPLKETETPRPLSPYGVTKLTAEQYLRVFNELYGIPAVSL 165 Query: 183 NCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP + +I + I R ++ + ++GDG+ RD++YV+D VRA LV + Sbjct: 166 RYFNVFGPRQSANQYAGVISIFINRALKNEPLVIFGDGKQTRDFIYVKDVVRANILVAES 225 Query: 240 GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G +N+ + +++ +I + +A T I F + RPG R D Sbjct: 226 RKANGRVFNVATGRQTTILELAMKIIEITNA--------TSSILFDKPRPGDIRHSQADI 277 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 S+I+ ++G+ P+ +E GL KTV WY Sbjct: 278 SEIR-KLGFEPEWTLEDGLKKTVEWY 302 >gi|298693395|gb|ADI96617.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus ED133] Length = 323 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 43/339 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 3 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSRIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWGH 173 RF+ S+ VYG L D+P N P SPY+ K + L + Sbjct: 115 -------RFIFASSAAVYGDL------PDLPKNDQSLILPLSPYAIDKYYGERTTLNYCS 161 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDH 229 Y IP + N +GP P+ I++M E + F +GDG RD++YV D Sbjct: 162 LYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDV 221 Query: 230 VRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V+++ L+++ K IG YNIG +++ IG L KS H F E R Sbjct: 222 VQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFKEARK 273 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G + D S +K+ +G+ P+ +E+GL + +DN Sbjct: 274 GDIKHSYADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 311 >gi|291544022|emb|CBL17131.1| Nucleoside-diphosphate-sugar epimerases [Ruminococcus sp. 18P13] Length = 357 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 37/349 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNL---------- 51 ++VTG AGFIG+ L L+N +K I+++ +D + ++ S+KE S + Sbjct: 13 ILVTGAAGFIGANLVTALLNTVKDIKLVGLDNINDYYDV-SIKEYRLSEIRKLAAAKPDC 71 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 ++F++ ++ D+ I E +P+ +VN AA++ V SI D ++ +N++G + +LE Sbjct: 72 TWTFIKGNLADKALIEKIFTESKPEMVVNLAAQAGVRYSITNPDVYVESNLVGFYNILEA 131 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYGS K +S +D NP S Y+ATK S++ L Sbjct: 132 CR---------NHPVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELLAH 182 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ Y IP YGP P+ ++++G + ++ G RD+ YV+D Sbjct: 183 AYSKLYNIPSTGLRFFTVYGPAGRPDMAYFSFTNKLLKGETIQIFNFGNCKRDFTYVDDI 242 Query: 230 VRALYLVLKKGRIGER------------YNIGGNNERKNIDI--VFEIGFLLDALIPKSY 275 V + V+++ + YNIG + +D V + + ++P Y Sbjct: 243 VEGIKRVMERAPEKKNGDDGLPLPPYRIYNIGNSTPENLLDFVTVLQEELIRADVLPSDY 302 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+S ++ + G+ P + +GL K WY Sbjct: 303 DFESHKKLVPMQPGDVPVTYADTSALEQDTGFKPNTPLRTGLCKFAEWY 351 >gi|32475749|ref|NP_868743.1| nucleotide sugar epimerase [Rhodopirellula baltica SH 1] gi|32446292|emb|CAD76120.1| nucleotide sugar epimerase [Rhodopirellula baltica SH 1] Length = 330 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 35/339 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE------ISQSNLFSFLQ 56 +VTG AGFI + + L+ +V+ ID + ++ LKE SQ F+F++ Sbjct: 9 FLVTGCAGFIANEVASQLLA-AGHRVVGIDNVNDYYDVR-LKEHRLEKLTSQGGAFTFVR 66 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D+ ++ E DA++N AA + V S+ ++TTN +G+ LL++ + Sbjct: 67 GDIEDQSTLQHIFDENSFDAVLNLAARAGVRYSMENPHVYMTTNAMGSLNLLDQMQ---- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + +++ ST +Y F E +P N P SPY+A+K +++ + ++ H Y Sbjct: 123 -----RVGVKKYVLASTSSLYAG-QPMPFIETLPVNTPISPYAASKKAAEAMAYSYHHLY 176 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 I V + YGP P+ I I + EG+ + L+GDG+ RD+ YV D Sbjct: 177 DIDVSVCRYFTVYGPAGRPDMCIFRFIKWIDEGTPIELFGDGEQSRDFTYVSDIAAGTIA 236 Query: 236 VLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LK +G E N+GG +++ + IG L + L K+ +E + H Sbjct: 237 ALKP--VGYEVINLGGGGTPVSLNDI--IGRLENLLGKKAK--------VEHKTFHKADI 284 Query: 295 AI---DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 I D SK IGW P+ ++ GL +V WY +N W Sbjct: 285 KITSADISKANDLIGWTPKVELDEGLAASVDWYRENQPW 323 >gi|238928046|ref|ZP_04659806.1| possible UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] gi|238884006|gb|EEQ47644.1| possible UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] Length = 338 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 28/322 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGG GFIGS + L+ + +++VID + G + +L + + ++ DIC Sbjct: 8 MKSIVTGGCGFIGSHIVDRLLAEGH-ELIVIDNCS-TGRMENLAHHQGNIHLTIVEADIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + D + + AA + + SI E+ +N+ GTF +L+ + Sbjct: 66 DYGTIAPLFE--GADWVFHMAALADIVPSIQKPQEYFHSNVDGTFSVLQAAK-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RFL ++ YG D +E P PY+ TK + L L W Y +PV+ Sbjct: 116 -AANVKRFLYTASSSCYGIPDHFPTNEQADIRPEYPYALTKRLGEELALHWAKVYQLPVV 174 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP + + + + + G + G G+ RD+ YV D V A Sbjct: 175 SLCLFNVYGPRSRTSGTYGAVFGVFLGQKLAGKPYTIVGTGEQTRDFTYVADIVDAFLTA 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K IGER+N+G + + + L++ L + E++ I RPG Sbjct: 235 AKSDVIGERFNVGSEH-------TYSVNRLVELL---GGADAEVVH-IPKRPGEPDCTWA 283 Query: 297 DSSKIKSEIGWFPQENMESGLN 318 D++KI + W P+ +E G+ Sbjct: 284 DTTKINKMLNWHPKVTLEEGVQ 305 >gi|296110120|ref|YP_003617069.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] gi|295434934|gb|ADG14105.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] Length = 325 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 24/334 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIG L +YL+ + + V+ ID L N LKE L +SF+++ Sbjct: 6 ILVTGSAGFIGFHLSKYLLENYDVNVIGIDNLNNYYN-PLLKEKRNEILKSYEDYSFIKL 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D D + + +LK+ + D IV+ A++ V S+ +I +N +GT + E R Sbjct: 65 DFSDWDTLFKSLKDKEIDLIVHLGAQAGVRYSLRNPWAYIRSNDMGTLNIFELAR----- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + D + + S+ VYG K FS ED P S Y+ATK +++ + + H YG Sbjct: 120 ----RLDIEKVVYASSSSVYGGNKKVPFSEEDRVDKPISLYAATKRANELMAYTYHHLYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I ++ YG Y P+ ++ + +Y G+ RD+ Y+ D V + Sbjct: 176 IKMIGLRFFTVYGEYGRPDMAFWKFAKNILLEKPIEVYNYGKMERDFTYISDVVDGIIKS 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++K E +N+G +N +++ + I + L K+ + I +PG R Sbjct: 236 IEKDFDYEIFNLGNDNP---VNLEYAISLMEKYLGKKAIKDYKPI-----QPGDVERTWA 287 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D K + +G+ P+ +E GL + W+L+N W Sbjct: 288 DLRKSRELLGYDPKVKIEEGLKRFCWWFLENKDW 321 >gi|134102142|ref|YP_001107803.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|133914765|emb|CAM04878.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 324 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 28/317 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG+GF+G A+ R V + V VID+ L E + +L + + D+ D Sbjct: 18 RVVVTGGSGFVGRAVVRAFV-ERGTPVTVIDQ-------QPLPEDLRGDLVTHVAGDLGD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +A+ E IV+ AA + V RS+ E N+ T LLE RL Sbjct: 70 PAAREAAVTEGA-AGIVHLAAITSVLRSVDRPAETYAANVAVTQELLELARL-------- 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +F+ ST+ V G + +G SE +P P +PY ATKA+ + L+ + YG+ Sbjct: 121 -RGLGQFVLASTNAVVGDIGRGTISESLPLRPLTPYGATKAACEMLLSGYAGAYGLATCA 179 Query: 182 SNCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 +N YGP + IP + + G+ V +YGDG RD+++V+D VR + K Sbjct: 180 LRFTNIYGPGMGHKDSFIPRLMRAALAGAGVEVYGDGSQSRDFVHVDDVVRGVLAAWDKQ 239 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 G IG +++ + +P ++ + + G +D +K Sbjct: 240 YSGTAI-IGAGRSISVTELIEAVRTATGRPLPVTH--------VPAKNGEMPAVIVDVAK 290 Query: 301 IKSEIGWFPQENMESGL 317 E+G+ P + GL Sbjct: 291 AGRELGYTPSVELTDGL 307 >gi|152994833|ref|YP_001339668.1| NAD-dependent epimerase/dehydratase [Marinomonas sp. MWYL1] gi|150835757|gb|ABR69733.1| NAD-dependent epimerase/dehydratase [Marinomonas sp. MWYL1] Length = 328 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 90/340 (26%), Positives = 164/340 (48%), Gaps = 35/340 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ +VTG AGFIG +C+ L+ + V+ +D L A L +LK+ + L F F+ Sbjct: 1 MKFLVTGAAGFIGMNVCKRLL-EAGHDVVGLDSLN-AYYLPALKQHRLAQLLPYENFRFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ DRE + E Q +++ AA++ V S+ E++ +N++G +LE R Sbjct: 59 KLDLADREGMAQLFAEEQFQRVIHLAAQAGVRYSLEAPFEYVDSNLVGMMTILEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 Q K + + S+ VYG K FSE D +P S Y+ATK +++ + ++ H Sbjct: 116 ----QTKVEHLVY--ASSSSVYGMNAKIPFSESDTVDHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP P+ L ++ + ++ G+ +RD+ Y++D V + Sbjct: 170 YGIPTTGLRFFTVYGPGGRPDMAPWLFTEAILNDKPIKVFNHGKMMRDFTYIDDIVEGVI 229 Query: 235 L---VLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 VL + + + YNIG N ++ ++A+ E I ++ Sbjct: 230 RIQDVLPQAQHSQGTTAPYAIYNIGNNQP-------IQLSEFIEAIETACGKTAEKI-YM 281 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D++++ + +G+ P ++ G+ K V WY Sbjct: 282 DMQPGDVPKTYADTTQLGAVVGYKPATTIQEGMTKFVEWY 321 >gi|109897412|ref|YP_660667.1| NAD-dependent epimerase/dehydratase [Pseudoalteromonas atlantica T6c] gi|109699693|gb|ABG39613.1| NAD-dependent epimerase/dehydratase [Pseudoalteromonas atlantica T6c] Length = 330 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 37/343 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L + V+ +D L Y NL LK I F+F++ Sbjct: 1 MKYLVTGAAGFIGNYVAEKLCAEGH-DVIGLDNLNDYYDPNLKLARLKRIEHCKTFTFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR I + + + D +++ AA++ V SI +I +N+ G +LE R Sbjct: 60 ADISDRNTIAALFSQEKFDRVIHLAAQAGVRYSIENPMAYIDSNLTGMATILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ K F+E D P S Y+ATK S++ + + H Y Sbjct: 116 -----HNNVEHLVYASSSSVYGANKKIPFAEGDRVDYPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ L ++ + ++ DG+ RD+ Y++D V + Sbjct: 171 SLPTTGLRFFTVYGPWGRPDMAPFLFTDAVVNDRAIKVFNDGKMQRDFTYIDDIVEGILR 230 Query: 236 ---VLKKGRIG-----------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V+ K R + YNIG N +++ IG + +AL K+ + Sbjct: 231 IQNVIPKPREESNSSSESSPFYKLYNIGNNTP---VELEAFIGCIENALSKKAVKN---- 283 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + G R D + ++SEIG+ PQ ++ G+N V W+ Sbjct: 284 -YMPMQDGDVVRTFADITNLESEIGFKPQTELQDGINNFVGWF 325 >gi|310780221|ref|YP_003968553.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] gi|309749544|gb|ADO84205.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] Length = 326 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 21/332 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNL---NSLKEISQSNLFSFLQVD 58 +I+TGGAGFIGS LC L+ + + +++ ID Y + N++K + ++ F + D Sbjct: 2 IIITGGAGFIGSHLCENLIKNGE-KIICIDNFNEYYDPMIKENNIKTLISNDRFQLFKGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + E + + ++N AA + V S+ + NI G +LE + + Sbjct: 61 IRDMPFLEKIFSENRVEMVINLAAMAGVRPSLEDPLLYEEVNIKGLMNILELCKKYKIN- 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F+Q S+ VYG+ K FSE D+ SPY+ATK S + L + H Y I Sbjct: 120 --------KFIQASSSSVYGNNSKVPFSENDVVDYAISPYAATKKSGEILGHVFHHLYNI 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 ++ YGP P+ I + EG V +YGDG + RD+ Y++D + + + Sbjct: 172 DMIQLRFFTVYGPRQRPDLAIHKFTKFITEGKAVPVYGDGSSERDYTYIDDILDGIIKSI 231 Query: 238 KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 R + Y+I E + I + I + D L K+ +I + +PG + Sbjct: 232 DYLRENQGIYHILNLGESETISLNKMIQVIQDELGIKA-----IINHLPLQPGDVNKTYA 286 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D SK K +G+ P+ N + G+ + WY + N Sbjct: 287 DISKAKKLLGYSPKTNFKIGIKNFISWYQEFN 318 >gi|199599618|ref|ZP_03212999.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] gi|199589493|gb|EDY97618.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus rhamnosus HN001] Length = 150 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 17/157 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+L++TGGAGFIGS ++ + +Q++V+DKLTYAGN +++++ + + DI Sbjct: 1 MKLMITGGAGFIGSNFVHFVYQHHPDVQIMVLDKLTYAGNKANIEDVLGDRV-KLVVGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + + Q D +VNFAAESH D S++ D F+ +N+IGT+ LLE R + Sbjct: 60 ADKELVDQLMG--QVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAARKY----- 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP 156 RF ISTDEVYG L ED+P + P Sbjct: 113 -----DVRFHHISTDEVYGDLP---LREDLPGHGEGP 141 >gi|157413803|ref|YP_001484669.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] gi|157388378|gb|ABV51083.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] Length = 341 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 89/344 (25%), Positives = 166/344 (48%), Gaps = 30/344 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQ-----SNL 51 M++++TG AGFIG L + L+ + K V+ ID L Y NL L+E+++ + Sbjct: 1 MKILITGCAGFIGYHLSKRLIQE-KYHVVGIDNLNNYYDPNLKKARLEELNKLAKEKNQE 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F I + + K+++P ++N AA++ V SI +I +NI+G +LE Sbjct: 60 FNFDSFGIENSNLLEDFFKKYKPSRVINLAAQAGVRYSIENPSAYIQSNIVGFCNILELC 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLA 170 R + + S+ VYG K FSE+ +P S Y+A+K S++ + Sbjct: 120 R---------HTEVKHLVYASSSSVYGGNTKMPFSEEQSVAHPVSLYAASKKSNELMAHT 170 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y +P YGP+ P+ + L ++ G + ++ G +RD+ Y++D V Sbjct: 171 YSHLYNLPATGLRFFTVYGPWGRPDMALFLFTNAILSGKKIQVFNQGNMIRDFTYIDDIV 230 Query: 231 RALY-LVLKKGRIGERYNIGGNNERKN--IDIVFEIG-----FLLDAL--IPKSYSHTEL 280 +L+ L+ K+ + E ++ + + +F IG L++ + + S + + Sbjct: 231 ESLFRLIFKEAKPDENFDTSKPSLSTSWAPHRIFNIGNSKPVQLMEYINALENSLGVSAI 290 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG + D+S ++ IG+ P + G+N+ V WY Sbjct: 291 KEFLPMQPGDVPATSADTSALEDWIGFKPNTAITDGINRFVDWY 334 >gi|322382715|ref|ZP_08056567.1| UDP-glucose epimerase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153324|gb|EFX45760.1| UDP-glucose epimerase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 331 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 148/327 (45%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAGFIGS L LV +V VID L+ + +E + F +DI Sbjct: 26 MKVAVTGGAGFIGSHLVDELVESGH-EVHVIDNLS-----SGYREYVHPKAY-FHLLDIR 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + C R+ + + +P + AA++ V S+L NI GT LL+ +C Sbjct: 79 EESC-RAWIHKEKPALFYHLAAQADVQLSLLHPYVDGDVNITGTVKLLK------TCAES 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ST VYG L K +E P P S Y +K +++ + + +G+P Sbjct: 132 GVQ---KFVFASTSGVYGELQKERVTETDPVQPISFYGLSKCTAESYIRLFYMLFGLPFT 188 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + N YGP P+ ++ L + RM EG + +YGDG+ RD++YV D V AL Sbjct: 189 ILRFGNVYGPRQTPKGEGGVVALFVKRMKEGLPLTVYGDGEQTRDFIYVNDVVTALTASA 248 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG E Y++ D+V + K +S I RPG R + Sbjct: 249 SKGN-QEIYHVSTGTHTSVNDLVRHLA--------KVHSQPVEILSRPARPGDIRHSCLS 299 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + E+ W +E GL T Y Sbjct: 300 ALKAEKELEWKAGTALEVGLATTYHSY 326 >gi|258424243|ref|ZP_05687124.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus A9635] gi|282915461|ref|ZP_06323233.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus D139] gi|283767872|ref|ZP_06340787.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus H19] gi|257845509|gb|EEV69542.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus A9635] gi|282320564|gb|EFB50902.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus D139] gi|283461751|gb|EFC08835.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus H19] Length = 326 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 27/331 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS L +L D + VL D G ++K ++ ++F ++DI + Sbjct: 6 KVLITGGAGFIGSHLVDFLSQDYDVYVL--DNYR-TGKRENIKNLADDHVF---ELDIRE 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +K++Q + I++ AA V S+ N++ T LLE + + S + Sbjct: 60 YDAVEQIMKKYQFEYIIHLAALVSVAESVEKPILSQEINVVATLRLLETIKKYNSHIK-- 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG L S+ P SPY+ K + L + Y IP + Sbjct: 118 -----RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAV 172 Query: 182 SNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P+ I++M E + F +GDG RD++YV D V+++ L++ Sbjct: 173 VKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIM 232 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + K +G YNIG +++ IG L KS H F E R G + Sbjct: 233 EHKDAVGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEHD----FKEARKGDIKHSYA 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 285 DISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|323440342|gb|EGA98055.1| UDP-glucose 4-epimerase [Staphylococcus aureus O11] Length = 326 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 98/339 (28%), Positives = 162/339 (47%), Gaps = 43/339 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSRIK 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWGH 173 RF+ S+ VYG L D+P N P SPY+ K + L + Sbjct: 118 -------RFIFASSAAVYGDL------PDLPKNDQSLILPLSPYAIDKYYGERTTLNYCS 164 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDH 229 Y IP + N +GP P+ I++M E + F +GDG RD++YV D Sbjct: 165 LYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDV 224 Query: 230 VRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V+++ L+++ K IG YNIG + E+ ++ L KS H F E R Sbjct: 225 VQSVRLIMEHKDAIGHGYNIGTGTFTN----LLEVYRIIGELYGKSVDH----EFKEARK 276 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G + D S +K+ +G+ P+ +E+GL + +DN Sbjct: 277 GDIKHSYADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|254518142|ref|ZP_05130198.1| NAD dependent epimerase [Clostridium sp. 7_2_43FAA] gi|226911891|gb|EEH97092.1| NAD dependent epimerase [Clostridium sp. 7_2_43FAA] Length = 326 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 93/338 (27%), Positives = 162/338 (47%), Gaps = 42/338 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE--ISQSNLF---SFLQV 57 + +TGG GF+GS L + LVN Y N+ L I QSN++ + +V Sbjct: 11 VFITGGTGFLGSYLVKKLVN-------------YGANVTILVRDYIPQSNIYRGEEYKKV 57 Query: 58 DIC-----DRECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLE 109 ++ D I L E++ D + + AA++ V +R+ LG +NI GT+ +LE Sbjct: 58 NVVHGTLEDYLLIERTLGEYEIDTVFHLAAQAIVGVANRNPLGT---FKSNIEGTWNILE 114 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 R S L + R + S+D+ YG +K + E+MP PY +K+ +D + Sbjct: 115 AAR--KSPLIK------RVIVASSDKAYGDQEKLPYDENMPLQGKHPYDVSKSCADLIAQ 166 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + TY +PV ++ C N YG ++IP +I ++ + DG +RD+ Y+ED Sbjct: 167 TYYETYKLPVCITRCGNLYGGGDLNFNRIIPQSIQSILNNKAPVIRSDGSFIRDYFYIED 226 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V A Y+ L + + N+GG + +I + L++ ++ S + I + Sbjct: 227 AVDA-YINLAEKVV--ELNLGGQAFNFSNEIQLTVLELVNKILKIMGSSMKPIILNQGSN 283 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +Y + + K ++ +GW P ++ GL+KT+ WY D Sbjct: 284 EIIHQY-LSAKKARTILGWSPNYTIDEGLSKTIEWYKD 320 >gi|271967767|ref|YP_003341963.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] gi|270510942|gb|ACZ89220.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] Length = 326 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 151/337 (44%), Gaps = 45/337 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIG+ +CR LV + + + V+D L+ +G L +L + L VD+ Sbjct: 1 MRILVTGGAGFIGANVCRALVTRPEAESITVLDDLS-SGALTNLGD---------LGVDV 50 Query: 60 CDRECI-RSALKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + L E A +++ AA V RS++ T N+ G+ +LE R Sbjct: 51 VTGSILDEDLLAELVAGATHVIHLAARPSVPRSLMDPLATHTVNVTGSLRVLEACR---- 106 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + S+ VYG ++ ED+P P SPY A+K + + LA+ +YG Sbjct: 107 ------GSRPHLILASSSSVYGDCEEPHKHEDLPTRPLSPYGASKLAMEAYALAYAESYG 160 Query: 177 IPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +PVL N YGP H +IP ++ + G V +YGDG RD+ YV + Sbjct: 161 LPVLPFRFFNVYGPLQATDHAYAAVIPAFVSAALNGRPVPIYGDGNQARDFTYVG----S 216 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + VL I RK +++ F G + L K L R IE R Sbjct: 217 VTTVLADAAIRR------VTSRKPVNLAF--GTRVSLLSLKDALAAVLDRPIEPSFLPAR 268 Query: 293 RYAIDSSKIKSEI--GWFP---QENMESGLNKTVCWY 324 I S+ + G FP +++ GL TV W+ Sbjct: 269 TGDIRESQASPRLLAGLFPGVRPVSLDDGLRMTVAWF 305 >gi|284992781|ref|YP_003411335.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] gi|284066026|gb|ADB76964.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] Length = 316 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 51/339 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS + L+ +V V+D L+ G+ +++ ++ F+Q + Sbjct: 1 MRVLVAGGAGYIGSVVTAALLEGGH-EVTVLDDLS-TGHADAVPSGAR-----FVQASLH 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + +P+A+++FAA+S V S + + + TN+ GT LLE R Sbjct: 54 DSAPV---LADVRPEAVLHFAAKSLVGESQVKPEIYWDTNVSGTLALLEAMR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D R + ST YG ++ ED P P++ Y ATK + D ++ ++ Y + Sbjct: 103 -AADCRRIVFSSTAATYGEPEQVPIREDAPTRPTNTYGATKLAVDAMLTSYAAAYDFAAV 161 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDWLY 225 ++ + G H E LIP+A+ +++ G H+ +YG DG +RD+++ Sbjct: 162 SLRYFNVAGAAYGLGERHTTETHLIPIAL-QVVAGRREHLTIYGEDYPTEDGTCIRDYIH 220 Query: 226 VEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED A L L GE YN+G G + ++ ID V E+ H Sbjct: 221 VEDLSDAHLLALTAPSPGEHRIYNLGNGTGFSVQQVIDAVREV-----------TGHPVP 269 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + + R G + S +I++++GW P+ +G+ + Sbjct: 270 VEVGQRRAGDPAQLVASSDRIRADLGWTPKHTDLAGIVR 308 >gi|158313122|ref|YP_001505630.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158108527|gb|ABW10724.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 323 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 121/231 (52%), Gaps = 22/231 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIG+ L R L+ +V+V+D L+ N + ++ L S + Sbjct: 1 MRVVVTGGAGFIGAHLTRALLAR-GCEVVVVDDLSTGARSNLIGLPARLVLGS-----VT 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + A D++V+ AA V+RS+L D T ++ T L + L Sbjct: 55 DRELLEDACTGA--DSVVHLAARPSVERSLL--DPLATHHVNATGTL--------TVLDV 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ + + +S+ VYG+ SED P P+SPY+A+ +++ LA ++G+PVL Sbjct: 103 AQRGETHVVVVSSALVYGTSGGRSQSEDDPPRPTSPYAASALAAEGYALAHQASFGLPVL 162 Query: 181 LSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 ++ N YGPY H ++P I + G + ++GDG+ RD+ YVE Sbjct: 163 VARLFNVYGPYQPARHAHAAVVPSFIDAALRGRPLPVHGDGRQTRDFTYVE 213 >gi|51246568|ref|YP_066452.1| nucleotide sugar epimerase [Desulfotalea psychrophila LSv54] gi|50877605|emb|CAG37445.1| probable nucleotide sugar epimerase [Desulfotalea psychrophila LSv54] Length = 339 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 43/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQS--NLFSFLQV 57 +++VTG AGFIG+ L L+ +V+ +D L Y L + +Q+ F+ LQ+ Sbjct: 6 KVLVTGAAGFIGARLSGQLLA-AGAEVVGLDNLNDYYDPQLKRDRMQTQAVGEGFTHLQL 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + DA+VN AA++ V S+ ++ +NI+G LLE C Sbjct: 65 DIADRGAMEKLFSDHSFDAVVNLAAQAGVRYSLKNPHSYVDSNIVGFVNLLE------GC 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K F+ S+ VYG+ FS D +P S Y+A+K +++ + A+ H YG Sbjct: 119 RHSGVK---HFVYASSSSVYGANTNMPFSVHDNVDHPVSLYAASKKANELMAHAYSHLYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + P T+ I EG + ++ +G RD+ Y++D V + Sbjct: 176 LPTTGLRFFTVYGPWGRPD-MAPFLFTKAILEGRAIDVFNNGDMERDFTYIDDIVEGVCR 234 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V++K YNIG NN+ K +++ I + +AL K+ Sbjct: 235 VIEKQPEANPDWSGQNPDPATSYCPYRVYNIGNNNKEK---LLYFIELIEEALGKKA--- 288 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG R + + + + P ++ G+ + V W+ D Sbjct: 289 --IKNFMPMQPGDVRATYANVDDLVRDFAYKPATSLRHGVQQFVAWFRD 335 >gi|125974705|ref|YP_001038615.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|256005637|ref|ZP_05430595.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281418826|ref|ZP_06249845.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|125714930|gb|ABN53422.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|255990395|gb|EEU00519.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281407910|gb|EFB38169.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|316941839|gb|ADU75873.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 314 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L+ D +V V+D L+ N + +S N F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKRLLEDGH-KVWVLDDLSNGQRKNIEEFLSNPNFAGFVEGDIK 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L E + D + AA +V SI +++GTF +LE+ R Sbjct: 60 NIPVLET-LFENKFDICYHLAASINVQDSIDDPGTTFQNDVVGTFNVLEQCR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + +ST VY D+ +E P P+SPY+ +K + + +VL++ + Y +P Sbjct: 111 --KHNTKIVFMSTCMVYDRANDENGITEAHPTKPASPYAGSKIAGENMVLSYWYAYKLPA 168 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ N YGP ++ + I R +EG + +YGDG RD LYVED + Sbjct: 169 VVIRPFNTYGPMQKSSGEGGVVAIFIRRNLEGLPLNIYGDGCQTRDLLYVEDCAEFVVRA 228 Query: 237 LKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRR 293 R+ GE N G + D+ I + + +P + +E+ + + Sbjct: 229 GYSDRVNGEIINAGLGRDISINDLALLIAKDKEKIVHVPHIHPQSEIAKLL--------- 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K K +GW P+ ++E G+ +T W Sbjct: 280 --CNYQKAKELLGWTPKVSLEEGIKRTEEW 307 >gi|163781591|ref|ZP_02176591.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882811|gb|EDP76315.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 314 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 35/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGFIGS LC + + +V+ +D G+ +++ + + F F + D+ Sbjct: 1 MRVLITGAAGFIGSHLCDRFLREGH-EVIGLDNF-LTGSPDNVSHLFGNPNFRFFKYDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L D I++FA + + + + +GT L +L + Sbjct: 59 NFIYLEGEL-----DLILHFACPASPVDYMNHPIHTMKVDSMGTLHTLGLAKLKGA---- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 R++ ST EVYG+ + E P P S Y K S+ L +A+ + Sbjct: 110 ------RYVFASTSEVYGNPEVHPQPETYWGRVNPIGPRSVYDEAKRFSEALTMAYHREH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI ++ N YGP +++P I + I G + +YGDG R + Y++D V + Sbjct: 164 GIDTRIARIFNTYGPRMRVNDGRVVPNFIYQAITGKPLTVYGDGSQTRSFCYIDDLVEGI 223 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 Y L +++G GE +N+G E +D L +I + S +E++ DRP D Sbjct: 224 YRLAIEEGLSGEVFNLGNPTEHTILD-------LAKLIIDIAGSPSEIV--FTDRPVDDP 274 Query: 293 -RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K K IGW P+ ++E GL +TV W+ Sbjct: 275 DRRKPDITKAKKVIGWEPETSIEEGLKRTVNWF 307 >gi|312880523|ref|ZP_07740323.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] gi|310783814|gb|EFQ24212.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] Length = 311 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 31/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIGS L L+ D V V+D L+ +G +L + F FL+ D+ Sbjct: 1 MNCLVTGGAGFIGSNLVDALLADGH-GVTVLDDLS-SGYGENLAHLRGREGFRFLEGDVR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A + +A+ + AA RSI N++GT +LE R C Sbjct: 59 DEALLAQAAR--GQEAVFHLAASVGNKRSIDNPLTDADINVLGTLKVLEAAR-SAGC--- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F S+ ++G L +ED P P SPY TK ++ L LA+ Y + + Sbjct: 113 -RKVVFS----SSAGIFGELKTLPIAEDHPVEPDSPYGCTKLCAEKLCLAYAKLYDLEAV 167 Query: 181 LSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP + +IP+ + +++ G + ++GDG+ RD+++V D V+A Sbjct: 168 ALRYFNVYGPRQRFDAYGNVIPIFVFQILRGEPITVFGDGEQTRDFVHVRDVVQANVKAA 227 Query: 238 KKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + +NI +D++ E G L PK S RPG R Sbjct: 228 LSREVSGAFNIASGTRITLNDLVDLLRETG-----LSPKVLSGPP-------RPGDVRHS 275 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D + ++ +G+ P+ ++ GL + V W Sbjct: 276 LADLRQARTLLGFEPRVDLREGLKEYVAW 304 >gi|291485527|dbj|BAI86602.1| hypothetical protein BSNT_04492 [Bacillus subtilis subsp. natto BEST195] Length = 316 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 151/330 (45%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D K V+ ID ++ L +LK + Q F+F++ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLQEKRFTFIK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 ++ + + L E D I + AA V RS G + NI LLE R Sbjct: 61 ENLLTADL--APLLE-GVDVIFHLAAIPGV-RSSWGNHFHPYAAHNIQALQRLLEACR-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + F F ST VYG +G SE+ +P SPY TK + + L + + Sbjct: 115 -----EHSIQTFVF--ASTSSVYGE-KQGKVSENTSLSPLSPYGVTKLTGEKLCHVYQQS 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +GIP+++ YGP P+ I + ++ + ++GDGQ RD+ Y+ D V+ + Sbjct: 167 FGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYIGDCVKGIT 226 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 VL K R IGE NIGG I +V +LI + F + G R Sbjct: 227 AVLGKPRLIGETVNIGGAERASVIKVV--------SLIEDISGRKATLHFSDKIAGEPRN 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK K + + P +++ GL + + Sbjct: 279 TWADISKAKQLLHYNPATSLKDGLTNEITY 308 >gi|315659568|ref|ZP_07912429.1| UDP-glucose 4-epimerase [Staphylococcus lugdunensis M23590] gi|315495301|gb|EFU83635.1| UDP-glucose 4-epimerase [Staphylococcus lugdunensis M23590] Length = 312 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 35/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS + + I+V VID L+ +G L+++ I + ++F D+ Sbjct: 1 MKALITGGAGFIGSHVAEKFSKE-GIEVFVIDNLS-SGFLDNIPFIDKEHIFI---KDVT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +K +Q D +++ AA V ++ E NI T LLE R W S L Sbjct: 56 DFNFVTELIKVYQFDYVIHLAAMVSVVETVEKPIESNQVNIDSTINLLEACRKWNSNLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F+ S+ VYG L + S Y P SPY+ K S + V + Y +P Sbjct: 115 ------KFIFASSAAVYGDLPELPKSVSQSYICPLSPYAIQKFSGEQYVKIYNSLYNVPT 168 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YGP P ++ + + YGDG+ RD++Y++D V AL++ Sbjct: 169 SCLRFFNIYGPKQNPTSDYSGVLSILNNKFSHNQTFTFYGDGEQTRDFVYIDDLVAALWM 228 Query: 236 VLKKGRI-GERYNIGGNNER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 VL G YN+G ++ K++ FE SY ++ +R+ R G D Sbjct: 229 VLNHSCTNGLIYNVGTGHQTTLKDVFKAFE----------NSYGYSIPVRYEPPRVG-DI 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++++ K ++G+ PQ + +G + YLD N Sbjct: 278 KHSLADIKPLQQLGYTPQYTISTG----IAAYLDYN 309 >gi|78044276|ref|YP_359903.1| hypothetical protein CHY_1057 [Carboxydothermus hydrogenoformans Z-2901] gi|77996391|gb|ABB15290.1| conserved domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 313 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 164/332 (49%), Gaps = 30/332 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGS + LV D +V+V+D L+ +G +L E+ +F++ D+ D Sbjct: 3 KFLVTGGAGFIGSHIVERLVRD-GAEVVVLDDLS-SGKEENLSEVLDK--ITFIKGDVRD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I+ K+ D I++ AA + V SI + N+ GT +L LS Sbjct: 59 LDLIKGITKDV--DYILHEAAMASVPASIDDPLKCHEVNVTGTINVL---------LSAK 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ++ VYG+ + EDM P SPY+ +K + + + + YGI + Sbjct: 108 ENGVKRVVYAASSAVYGNNETLPKKEDMYPEPLSPYAVSKYAGELYLQVFARIYGIEAVG 167 Query: 182 SNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +IP I +++G +YGDG RD+++++D V A L L Sbjct: 168 LRYFNVFGPKQDPNSQYAAVIPKFIDALLKGMPPTIYGDGMQTRDFIFIDDVVEANMLAL 227 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +G G+ +NI ER +++ +++ I ++ I Y+ E R G R Sbjct: 228 TARGASGKVFNI-ACGERISLNRLYKVIKEIIGVDIEPVYA--------EARVGDVRDSL 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S ++ +G+ P+ ++E GL KTV W+ N Sbjct: 279 ADISLARNILGFEPKVSLEEGLKKTVEWHKRN 310 >gi|311067213|ref|YP_003972136.1| YfnG protein [Bacillus atrophaeus 1942] gi|310867730|gb|ADP31205.1| YfnG [Bacillus atrophaeus 1942] Length = 322 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 20/327 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTG G +GS L + LV+ +I NL + + + N+ +Q + D Sbjct: 9 VFVTGCTGLLGSYLVKELVDQGANVTGLIRDAVPKSNLYQGEYVQKINI---VQGALEDL 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I AL E++ D + + AA++ V + NI+GT W+ L + Sbjct: 66 SVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGT----------WNILEACR 115 Query: 123 KDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + S+D+ YG + + E+MP + PY +K+ +D + + HTYG+PV Sbjct: 116 KHPLIKRVIVASSDKAYGDQENLPYDENMPLQGNHPYDVSKSCADLISHTYFHTYGLPVC 175 Query: 181 LSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 ++ C N YG ++IP I ++ G + DG VRD+ Y+ED V+A L+ +K Sbjct: 176 ITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEK 235 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 E N+ G + +I + L++ ++ K+ + + + + + Sbjct: 236 ---MEENNLAGEAFNFSNEIQLTVLELVEKIL-KAMNSNLKPNVLNQGSNEIKHQYLSAE 291 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLD 326 K + + W P ++ GL KT+ WY + Sbjct: 292 KARKLLNWTPAYTIDEGLEKTIKWYTE 318 >gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] Length = 311 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 20/235 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L R L D I+V V+D LT GN+ ++ + ++ DI Sbjct: 1 MKALVTGGAGFIGSQLVRALA-DSGIRVHVLDNLT-TGNITNVDPRAVMHI-----ADIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E R+ L PD + + AA++ V +SI DE N++GT LL+ +C Sbjct: 54 SSEA-RTLLIRESPDIVFHLAAQADVQQSIHRPDEDADVNVLGTIHLLQ------AC--- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ST VYG L K ED P P S Y +K +++ + + YG+ Sbjct: 104 HEAGVSKFIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + N YGP + ++ L + R+ +GS + ++GDG RD++YV+D VRA Sbjct: 164 ILRYGNVYGPGQAAKGEGGVVALFMERLKKGSPLLIHGDGTQTRDFVYVKDVVRA 218 >gi|23321128|gb|AAN23068.1| CDP-tyvelose epimerase [Yersinia pseudotuberculosis] Length = 338 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + ++V+V D L+ G+ ++LK + F+++ DI Sbjct: 1 MKLLITGGCGFLGSNLASHAIKS-GMEVIVFDNLSRYGSSDNLKWLQSIGGFTYVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R I +++F+PD I + A + + SI N+ GTF LLE RL+ Sbjct: 60 NRNDITRLIQKFKPDNIFHLAGQVAMTTSIDNPQMDFEVNVGGTFNLLEAIRLF------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASS 164 + + ST++VYG L++ + E +MP ++ S SPY +K ++ Sbjct: 114 --NPECGIIYSSTNKVYGDLEQFTYRETDTRYECIEMPDGFDESTQLTFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSH-----VFLYGD 216 D +L + YG+ ++ S+ YG F + + + IE S + G+ Sbjct: 172 DQYMLDYARIYGLKTVVFRHSSMYGGRQFSTYDQGWVGWFCQKAIEASRGVNSPFTISGN 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+ ED + + L R+ G +NIGG E L + + Sbjct: 232 GKQVRDVLHAEDIISLYFSTLSNLERVKGNAFNIGGTIEHSLSL-------LELFSLLEK 284 Query: 275 YSHTEL-IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y+ TEL I R + + + +KI GW P+ + ESG+ + W Sbjct: 285 YTETELKYTRIPVRESDQKVFVANINKISESTGWIPKVSSESGIKIMLDW 334 >gi|160902769|ref|YP_001568350.1| NAD-dependent epimerase/dehydratase [Petrotoga mobilis SJ95] gi|160360413|gb|ABX32027.1| NAD-dependent epimerase/dehydratase [Petrotoga mobilis SJ95] Length = 313 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/327 (28%), Positives = 158/327 (48%), Gaps = 29/327 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L L+ + V+VID L+ GN+ L S + F Q DI D Sbjct: 8 RILVTGGAGFIGSNLVDRLMKEGH-SVVVIDNLS-TGNVEFL-----SPMALFYQQDIRD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + D + + AA+ V S+ + N++GT LL+ + Sbjct: 61 YNVLEKIFETHKFDYVFHLAAQISVPDSVKDPNWDAEINVMGTLNLLKLSV--------- 111 Query: 122 KKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D +F+ ST +YG SED +P SPY+ +K + + + + Y + Sbjct: 112 KYDIKKFIFSSTGGAIYGDNAPIPTSEDYCPHPISPYAISKLACEKYIEFYSLQYDLNYT 171 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP P+ ++ + M+E + +YGDG+ VRD+++V D V A +L + Sbjct: 172 ILRYANVYGPKQTPKGEAGVVAIFTQNMLEKKEIVIYGDGEQVRDFVHVFDVVEANFLSI 231 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K E NI N++ ++ +FE+ + + + + +R G + + Sbjct: 232 NKAD-KETINI-STNKKTTVNELFEV-------MKRKTGYENAPVYKPERDGDVKISLLS 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++K KS +GW P ++E G+ T+ WY Sbjct: 283 NAKAKSILGWEPNYDLEKGVENTIEWY 309 >gi|153004763|ref|YP_001379088.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152028336|gb|ABS26104.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 312 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 27/326 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS + + + V V+D +L+S K S F VD+ Sbjct: 4 RILITGGAGFIGSTIADLFL-EAGWDVAVLD------DLSSGKRESVPPAARFYPVDVRS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LK+ +P I + AA+ V RS+ N+ G L++ + Sbjct: 57 AAAL-EVLKKERPQVICHQAAQIDVRRSMAEPRFDADVNVGGLLNLMQGA-------VEA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + S YG D+ ED P P S Y A KA+S+ + + YGIP Sbjct: 109 KSVEHVLFASSGGATYGDTDRVPTPEDHPQLPVSHYGAAKAASELYLNVYRANYGIPFTA 168 Query: 182 SNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 SN YGP P ++ + R++EG ++GDG RD+++ D RA L + Sbjct: 169 LRYSNVYGPRQDPHGEAGVVAIFCGRLLEGRPCTIFGDGSQTRDYVFAGDVARANLLAAE 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 K R N+G E ++ + + P ++ L G +R ID Sbjct: 229 K-RYDGPLNVGTGVETDVNELYAHLARAAGSDRPAEHAPARL--------GEQKRSCIDP 279 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 S+ + +GW P+ + GL +T W+ Sbjct: 280 SRAGAAVGWRPEVRLADGLRRTFEWF 305 >gi|75676591|ref|YP_319012.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] gi|74421461|gb|ABA05660.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] Length = 334 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 146/338 (43%), Gaps = 35/338 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 +++VTG AGFIGS +LV +L + L + + ++ S + S + Sbjct: 5 KVLVTGAAGFIGS----HLVEELVRRNLTVRAFVHYNSMGSRGWLDMSPRYIRDALDVFA 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R A+K DA+ + AA + S D ++ TNI GT +++ R Sbjct: 61 GDIRDPNGVRDAMKGC--DAVFHLAALIAIPYSYHSPDTYVDTNIRGTLNVVQAARDLGV 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + ST EVYG+ +E P SPYSA+K +D + L++ ++G Sbjct: 119 A---------HVVHTSTSEVYGTAQFVPITEGHPLQGQSPYSASKIGADQIALSFERSFG 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP +IP IT++ G+ V G + RD+ +V D V Sbjct: 170 TPVTVVRPFNTYGPRQSARAVIPAIITQIAGGARVIRLGSTEPTRDFSFVSDTVAGFIAA 229 Query: 237 -LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH---DR 292 ++ IGE N+G E + I ++ I + RP DR Sbjct: 230 DEQRAAIGEVVNLGSGFEVSIGNTAELIAEIMGVEIQIELDQS------RQRPARSEVDR 283 Query: 293 RYAIDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 +A ++K + + W PQ + G+ KTV W+ D Sbjct: 284 LFA-SNTKAQKLLSWTPQFAGLDGFRRGIEKTVPWFRD 320 >gi|15923118|ref|NP_370652.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus Mu50] gi|15925832|ref|NP_373365.1| hypothetical protein SA0123 [Staphylococcus aureus subsp. aureus N315] gi|21281831|ref|NP_644917.1| hypothetical protein MW0102 [Staphylococcus aureus subsp. aureus MW2] gi|49485006|ref|YP_042227.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus MSSA476] gi|82749841|ref|YP_415582.1| UDP-glucose 4-epimerase [Staphylococcus aureus RF122] gi|148266554|ref|YP_001245497.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus JH9] gi|150392593|ref|YP_001315268.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus JH1] gi|156978458|ref|YP_001440717.1| hypothetical protein SAHV_0127 [Staphylococcus aureus subsp. aureus Mu3] gi|253316258|ref|ZP_04839471.1| hypothetical protein SauraC_08981 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255004925|ref|ZP_05143526.2| hypothetical protein SauraM_00610 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|269201780|ref|YP_003281049.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus ED98] gi|296275946|ref|ZP_06858453.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus MR1] gi|13700044|dbj|BAB41343.1| SA0123 [Staphylococcus aureus subsp. aureus N315] gi|14245895|dbj|BAB56290.1| similar to NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203266|dbj|BAB93967.1| MW0102 [Staphylococcus aureus subsp. aureus MW2] gi|49243449|emb|CAG41870.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus MSSA476] gi|82655372|emb|CAI79755.1| probable UDP-glucose 4-epimerase [Staphylococcus aureus RF122] gi|84993524|dbj|BAE75926.1| putative epimerase [Staphylococcus aureus] gi|147739623|gb|ABQ47921.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus JH9] gi|149945045|gb|ABR50981.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus JH1] gi|156720593|dbj|BAF77010.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|262074070|gb|ACY10043.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus ED98] gi|285815853|gb|ADC36340.1| UDP-glucose 4-epimerase [Staphylococcus aureus 04-02981] gi|302331876|gb|ADL22069.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus JKD6159] gi|312828645|emb|CBX33487.1| putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129109|gb|EFT85105.1| hypothetical protein CGSSa03_13862 [Staphylococcus aureus subsp. aureus CGS03] gi|329725761|gb|EGG62240.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus 21172] gi|329732269|gb|EGG68619.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus 21193] Length = 323 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 3 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 115 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 168 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 227 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K IG YNIG +++ IG L KS H F E R G + Sbjct: 228 IMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFKEARKGDIKHS 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 280 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 311 >gi|167461791|ref|ZP_02326880.1| nucleoside-diphosphate-sugar epimerases [Paenibacillus larvae subsp. larvae BRL-230010] Length = 306 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 148/327 (45%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAGFIGS L LV +V VID L+ + +E + F +DI Sbjct: 1 MKVAVTGGAGFIGSHLVDELVESGH-EVHVIDNLS-----SGYREYVHPKAY-FHLLDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + C R+ + + +P + AA++ V S+L NI GT LL+ +C Sbjct: 54 EESC-RAWIHKEKPALFYHLAAQADVQLSLLHPYVDGDVNITGTVKLLK------TCAES 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ST VYG L K +E P P S Y +K +++ + + +G+P Sbjct: 107 GVQ---KFVFASTSGVYGELQKERVTETDPVQPISFYGLSKCTAESYIRLFYMLFGLPFT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + N YGP P+ ++ L + RM EG + +YGDG+ RD++YV D V AL Sbjct: 164 ILRFGNVYGPRQTPKGEGGVVALFVKRMKEGLPLTVYGDGEQTRDFIYVNDVVTALTASA 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 KG E Y++ D+V + K +S I RPG R + Sbjct: 224 SKGN-QEIYHVSTGTHTSVNDLVRHLA--------KVHSQPVEILSRPARPGDIRHSCLS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + E+ W +E GL T Y Sbjct: 275 ALKAEKELEWKAGTALEVGLATTYHSY 301 >gi|84685369|ref|ZP_01013267.1| udp-glucuronic acid epimerase protein [Maritimibacter alkaliphilus HTCC2654] gi|84666526|gb|EAQ12998.1| udp-glucuronic acid epimerase protein [Rhodobacterales bacterium HTCC2654] Length = 337 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+ +TG AGFIG L R L+++ V D +T Y L + +SQS F+ + Sbjct: 3 RIFITGTAGFIGYHLARLLLDEGH-TVHGFDGMTDYYDVTLKQRRHAMLSQSERFAATEA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + +A+ F P+ IV+ A ++ V S+ ++ N++GTF ++E R Sbjct: 62 MLEDLAAVDTAIDGFVPEIIVHLAGQAGVRYSLENPRAYVDANVVGTFNIMEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + ST VYG+ + F E D P + Y+ATK +++ + ++ H Y Sbjct: 117 ----RHEVRHLMMASTSSVYGANTEMPFKETDKADTPMTIYAATKKATEAMGHSYAHLYD 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP+ P+ + + + G + +Y G+ RD+ YVED VRA+ L+ Sbjct: 173 LPTTMFRFFTVYGPWGRPDMALFKFVRATLGGEAIDVYNHGEMFRDFTYVEDLVRAIRLL 232 Query: 237 L--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + + G + E NIG + + +D V I DAL K+ + Sbjct: 233 MFDAVPARPEGGEVPEGDSLSPVAPYRVVNIGNSQSVRLLDFVDAIE---DALGMKTRRN 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ +PG D+ ++ G+ PQ ++ G+ V WY D Sbjct: 290 -----YMDIQPGDVPATWADAGLLERLTGYRPQTDVRDGVRAFVDWYRD 333 >gi|323443175|gb|EGB00794.1| UDP-glucose 4-epimerase [Staphylococcus aureus O46] Length = 326 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 165/343 (48%), Gaps = 51/343 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAA----ESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + + +K +Q D +++ AA V++ IL + N++ T LLE + + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAELVEKPILSQE----INVVATLRLLEIIKKYN 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVL 169 S + RF+ S+ VYG L D+P N P SPY+ K + L Sbjct: 114 SRIK-------RFIFASSAAVYGDL------PDLPKNDQSLILPLSPYAIDKYYGERTTL 160 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLY 225 + Y IP + N +GP P+ I++M E + F +GDG RD++Y Sbjct: 161 NYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVY 220 Query: 226 VEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V D V+++ L+++ K IG YNIG +++ IG L KS H F Sbjct: 221 VYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFK 272 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 E R G + D S +K+ +G+ P+ +E+GL + +DN Sbjct: 273 EARKGDIKHSYADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|150376037|ref|YP_001312633.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150030584|gb|ABR62700.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 373 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 98/354 (27%), Positives = 156/354 (44%), Gaps = 49/354 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++V GG+GF+GS L + D + V+V+D L+ G NL L E S + DI Sbjct: 24 ILVVGGSGFVGSNLADSFLRDGE-HVIVLDNLSRPGVERNLEWLVE-SHGRAVEAVTADI 81 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I+ A + + A+ +FAA++ V S+ E TN GT +LE RL Sbjct: 82 RDLAAIQPAFRNAK--AVFHFAAQTAVTTSLQQPTEDFETNARGTLNVLEAARL------ 133 Query: 120 QDKKDQFRFLQISTDEVYGSLD-------KGLF------------SEDMPYNPSSPYSAT 160 + F ST++VYG+L+ +G + E P + +PY + Sbjct: 134 AGRSSPVIF--ASTNKVYGALEHMEMRDVQGRYMPVDEATRAHGVGEAQPLDFCTPYGCS 191 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D VL + ++G+P + S YGP F + + + R + G + +YGDG Sbjct: 192 KGVADQYVLDYARSFGLPTAVLRMSCVYGPRQFGTEDQGWVAHFLIRALAGEPISIYGDG 251 Query: 218 QNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGG--NNERKNIDIVFEIGFLLDALIPK 273 + VRD L+V D V A VLK G G +N+GG +N ++++ EI L + Sbjct: 252 KQVRDILHVTDAVAAYRAVLKAIDGLKGRAFNLGGGPDNAVSIVEVLNEIEILTGRRLST 311 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S + R G + D+ I +GW GL W +++ Sbjct: 312 GKS--------DWRAGDQLYFVADTRAIADAVGWRAGMAWREGLRNLYAWLVED 357 >gi|258593082|emb|CBE69393.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 342 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/343 (29%), Positives = 159/343 (46%), Gaps = 34/343 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVD 58 +++TG AGFIG + L++ + V+ ID L A ++ L++I F F Q+D Sbjct: 16 IVLTGCAGFIGCKVAELLLHAGHL-VIGIDNLNDAYDVRLKQWRLEQILHHPGFQFHQLD 74 Query: 59 ICDRECIRSALKEF-------QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 I +R + SAL E +P AI+N AA + V +S+ + TN+ GT LL+ Sbjct: 75 ISNRAAL-SALFESACGTPGNRPSAIINLAARAGVRQSVEDPWVYFDTNVTGTLNLLDLC 133 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R LS +K F+ ST +YG + + ED + P SPY+A+K +++ Sbjct: 134 R----TLSINK-----FILASTSSLYGQGNAMPYREDANTDAPLSPYAASKKAAEAFCYT 184 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + + YGI V + YGP P+ + + + E V LYGDG+ RD+ +V+D Sbjct: 185 YHYLYGIDVTVFRYFTVYGPAGRPDMSLFRFVQWISEERPVMLYGDGRQSRDFTFVDDIA 244 Query: 231 RALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 R L +G E N+G + +D V L++AL+ K R P Sbjct: 245 RGTIAGLTP--LGFEIINLGSDTPIVLMDAV----RLVEALVGKRAEIVHASR----HPA 294 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + SK K + W PQ + G+ V WY N W R Sbjct: 295 DVQATWAEISKAKRLLDWQPQSTFQDGVGALVRWYQTNREWAR 337 >gi|222099136|ref|YP_002533704.1| UDP-glucose 4-epimerase [Thermotoga neapolitana DSM 4359] gi|221571526|gb|ACM22338.1| UDP-glucose 4-epimerase [Thermotoga neapolitana DSM 4359] Length = 309 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 165/330 (50%), Gaps = 32/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V+VID L+ +G + +L + + F + I Sbjct: 1 MNVLVTGGAGFIGSHVVDRLI-EKGYGVIVIDNLS-SGKVQNLNKNAL-----FYEQSIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +P+ + + AA++ V S+ TNI+G+ +LLE++ + Sbjct: 54 DEEMMERIFSLHKPEYVFHLAAQASVSISVKEPARDAKTNILGSLVLLEKSVKYGVK--- 110 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F+ ST +YG K + ++P+ P SPY K S + + + YG+ Sbjct: 111 ------KFIFSSTGGAIYGENVKVFPTPETEIPH-PISPYGIAKYSVEMYLDFFAREYGL 163 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +N YGP P ++ + RM++G V+++GDG+ VRD++YV+D V + Sbjct: 164 KYTVLRYANVYGPRQDPHGEAGVVAIFTERMLKGEEVYIFGDGEYVRDYVYVDDVVESNL 223 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L +++G + +NIG V E+ +L + Y+ + + R G R+ Sbjct: 224 LAMERGD-NDVFNIGTGRG----TTVNELFHMLKEIT--GYNREPVYK--PPRKGDVRKS 274 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +K K ++GW P+ +E GL TV ++ Sbjct: 275 ILDWTKAKEKLGWEPKVPLEEGLRLTVEYF 304 >gi|167623433|ref|YP_001673727.1| NAD-dependent epimerase/dehydratase [Shewanella halifaxensis HAW-EB4] gi|167353455|gb|ABZ76068.1| NAD-dependent epimerase/dehydratase [Shewanella halifaxensis HAW-EB4] Length = 336 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGS + L +V+ ID + Y NL + LK + LFSF + Sbjct: 1 MKYLVTGAAGFIGSKVSERLCA-AGHEVVGIDNINDYYDVNLKLDRLKNLQSQTLFSFKK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + E D +++ AA++ V SI + +N++G +LE R Sbjct: 60 LDLADREGIATLFAEEGFDRVIHLAAQAGVRYSIDNPMAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 ----HHKIQ-HLVYASSSSVYGLNSKMPFSTDDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++++G + +Y G RD+ Y++D V + Sbjct: 171 GVPTTGLRFFTVYGPWSRPDMALLKFTNKIVKGEAIDVYNHGNLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + + +NIG + K +D + + + KS Sbjct: 231 IQDSVPVANPEWNAAEATPATSSAPYRVFNIGNGSPVKLMDYI--------SALEKSLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ +PG D+ + +G+ PQ ++E G+ K V WY Sbjct: 283 EAIKNMMDMQPGDVHSTWADTEDLFKTVGYKPQTSVEEGVQKFVEWY 329 >gi|124515922|gb|EAY57431.1| UDP-glucuronate 5'-epimerase [Leptospirillum rubarum] Length = 341 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 165/349 (47%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIGS L L+ + V+ +D + Y +L L + + F+F + Sbjct: 1 MKILVTGAAGFIGSTLAFRLLCEGH-DVVGVDNMNDYYEVSLKEARLARLQSHSRFTFHR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + + A+ + AA+ V ++ +I TN+ G +LE Sbjct: 60 LDIVDRNRLLDLFRRENFPAVYHLAAQVGVRYALENPFSYIDTNLAGFGNILE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTY 175 + + + S+ VYG+ + FSE P +P S Y+ATK +++ + ++ H + Sbjct: 113 --GALRSNTLHLIYASSSSVYGANVRQPFSEHHPTEHPISLYAATKKANELMAHSYAHIH 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV YGP+ P+ + ++EG + +YG+G +RD+ YV+D V +L Sbjct: 171 GLPVTGLRFFTVYGPWGRPDMALFKFARLIVEGQSIPVYGEGNMIRDFTYVDDIVESLVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L K + YNIG N + ++ I L + L K+ Sbjct: 231 LLDKPPVPSPDWDARAADSATSHAPYRIYNIGNKNP---VPLMRYIEVLEECLGRKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG D++++++ G+ P ++E+G+ + V WYL+ Sbjct: 285 --VKEFLPVQPGDMTSTWADTAELEALTGFTPNTSIETGIRRFVDWYLE 331 >gi|260428694|ref|ZP_05782672.1| NAD-dependent epimerase/dehydratase family protein [Citreicella sp. SE45] gi|260420288|gb|EEX13540.1| NAD-dependent epimerase/dehydratase family protein [Citreicella sp. SE45] Length = 346 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 162/354 (45%), Gaps = 45/354 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL----FSFLQVD 58 +IVTG AGFIG LCR L++D QV+ +D L+ ++ SLKE + L F+ + Sbjct: 4 VIVTGSAGFIGYHLCRRLLDD-GFQVIGVDSLSDYYDV-SLKEARHAQLEHDRFTPVIGQ 61 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + PD +V+ AA++ V SI ++ +NI+GTF +LE R Sbjct: 62 VEAPGLMMELFERHTPDLVVHLAAQAGVRYSITHPRSYLESNIVGTFEILEAAR------ 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST YG+ + +MPY + S Y+ATK +++ + ++ Sbjct: 116 ---AHPPQHMLLASTSSAYGA------NTEMPYRETVKADHQMSFYAATKKATENMAHSY 166 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H YG+P + YGP+ P+ + ++EG + +Y G +RD+ YVED V Sbjct: 167 AHLYGLPTTMFRFFTVYGPWGRPDMALFKFTKAILEGQPIDVYNHGDMMRDFTYVEDLVE 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVF----------EIGFLLD--ALIPKSYSHTE 279 + L+L + ER G E ++ V E L D A I ++ Sbjct: 227 GIRLLLDA--VPERPVDGTVPEGDSLSPVAPYRVVNIGNSEAVQLTDFIAAIERATGLEA 284 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + +PG D+ +K+ G+ P+ ++E G+ + V WY ++RP Sbjct: 285 TRNMMPMQPGDVPATWADAELLKTLTGYSPRTSVEQGVARFVEWY---RAFYRP 335 >gi|161520318|ref|YP_001583745.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189353503|ref|YP_001949130.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|160344368|gb|ABX17453.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189337525|dbj|BAG46594.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] Length = 335 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C LV + V+ +D L LN + ++ S F F++ D+ Sbjct: 14 RVLVTGGAGFLGSYVCERLVVE-GAHVVCVDSLLTGRKLN-VADLKASGRFEFVKADVT- 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L + Q D I N A + + TN++G CL+ Sbjct: 71 -----LGLPQLQVDEIWNLACAASPPTYQHDPVHTMMTNVLG----------MNHCLALA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 +K R Q ST E+YG D + + Y P + Y K +++ L + T Sbjct: 116 RKTGARVFQASTSEIYG--DPSVHPQMETYRGNVNTIGPRACYDEGKRAAEALCYDYYRT 173 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ V ++ N YGP P +++ I + G + +YGDG R + +V D + Sbjct: 174 YGVDVRVARIFNTYGPRMSPRDGRVVSNFIVGALNGEPLEIYGDGLQTRSFCFVSDLIDG 233 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI-RFIEDRPGH 290 + ++ R +G NIG E I+ L ++ + SH+E++ R + H Sbjct: 234 FFCLMGAERNVGMPVNIGNPVEFTMIE-------LAQKVLALTGSHSEIVFRPLPIDDPH 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 RR D S +E+GW P +++ GL++TV Y W P+ + Sbjct: 287 QRRP--DISVAATELGWRPCIDLDEGLHRTV-DYFARELWIAPMLQ 329 >gi|83311258|ref|YP_421522.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] gi|82946099|dbj|BAE50963.1| Nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] Length = 326 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/338 (27%), Positives = 151/338 (44%), Gaps = 32/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIG L+ + +VL +D L+ Y L L+ + + FSF+Q Sbjct: 1 MTILVTGAAGFIGYHTSLRLLARGE-RVLGVDCLSPYYDVRLKQTRLEHLRKHEGFSFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAI--VNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DI DR ++ P+ +N AA++ V S+ ++ +NI G ++LE R Sbjct: 60 ADIADRAAMQQVATS-NPEVTDYINLAAQAGVRHSLTAPFDYTHSNIEGHLVMLEMARAN 118 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 C F+ S+ VYG+ K FS ED P S Y+A+K S + + ++ H Sbjct: 119 PKCR--------HFVYASSSSVYGANTKLPFSVEDRVDTPISLYAASKRSGELMSHSYSH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + +P YGP+ P+ L +I G + ++ +G RD+ Y++D V + Sbjct: 171 LFRVPTTGLRFFTVYGPWGRPDMAAYLFADAIIAGQPIKVFNNGDMRRDFTYIDDIVSGV 230 Query: 234 YLVLK-------KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 VL K YNIG NN K +D + L+ S F Sbjct: 231 VGVLDNPPADDGKAPPYRLYNIGNNNSEKLMDFI--------GLVESSLGRKATYDFHPM 282 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D S I+ ++G+ P + G+ + + WY Sbjct: 283 QPGDVKETYADISAIQRDVGFAPATPISVGVPRFIEWY 320 >gi|257794477|ref|ZP_05643456.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9781] gi|258407562|ref|ZP_05680698.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9763] gi|258419835|ref|ZP_05682797.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9719] gi|258438650|ref|ZP_05689873.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A9299] gi|258443892|ref|ZP_05692230.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8115] gi|258445092|ref|ZP_05693329.1| UDP-glucose 4-epimerase [Staphylococcus aureus A6300] gi|258447696|ref|ZP_05695835.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A6224] gi|258455680|ref|ZP_05703635.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A5937] gi|282894351|ref|ZP_06302581.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8117] gi|282928381|ref|ZP_06335984.1| UDP-glucose 4-epimerase [Staphylococcus aureus A10102] gi|295405398|ref|ZP_06815208.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8819] gi|297209371|ref|ZP_06925769.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244735|ref|ZP_06928615.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8796] gi|300911370|ref|ZP_07128819.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus TCH70] gi|257788449|gb|EEV26789.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9781] gi|257840787|gb|EEV65244.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9763] gi|257844117|gb|EEV68504.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9719] gi|257848209|gb|EEV72201.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A9299] gi|257850776|gb|EEV74720.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8115] gi|257856000|gb|EEV78919.1| UDP-glucose 4-epimerase [Staphylococcus aureus A6300] gi|257858978|gb|EEV81842.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A6224] gi|257861892|gb|EEV84665.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A5937] gi|282589965|gb|EFB95048.1| UDP-glucose 4-epimerase [Staphylococcus aureus A10102] gi|282763396|gb|EFC03526.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8117] gi|294969473|gb|EFG45492.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8819] gi|296885832|gb|EFH24767.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178252|gb|EFH37499.1| UDP-glucose 4-epimerase [Staphylococcus aureus A8796] gi|300887549|gb|EFK82745.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus TCH70] Length = 326 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIK 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 118 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 171 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 230 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K IG YNIG +++ IG L KS H F E R G + Sbjct: 231 IMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFKEARKGDIKHS 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 283 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|298293161|ref|YP_003695100.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] gi|296929672|gb|ADH90481.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] Length = 339 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+ +TG AGFIG L R L+++ +V D +T Y L + ++QS FS + Sbjct: 5 RVFITGTAGFIGFHLARLLLSE-GFRVHGYDGMTDYYDVRLKQRRHSMLAQSEGFSSTEA 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D E + ++EF+PD IV+ AA++ V S+ +I +NI+GTF ++E R + Sbjct: 64 MLQDMETLERTIEEFRPDIIVHLAAQAGVRYSLEKPRAYIDSNIVGTFNVMECAR---AV 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q L ST VYG+ ++ F E D P + Y+ATK +++ + ++ H YG Sbjct: 121 PVQ------HLLMASTSSVYGANEEMPFHETDKADTPLTIYAATKKATEAMGHSYAHIYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP+ P+ + ++EG+ + +Y G+ RD+ YV+D VR + L+ Sbjct: 175 LPTTMFRFFTVYGPWGRPDMALFKFTRGILEGTPIDIYNHGEMWRDFTYVDDLVRGIRLL 234 Query: 237 ------LKKGRIGE-------------RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L R E NIG +++ + +D V I L A ++Y Sbjct: 235 IDAVPPLPGARETEVPGDSLSPAAPFRVVNIGNSDKVRLLDFVDAIEQELGAKAIRNYMP 294 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + D P ++ I + G+ P G+ + V WY D Sbjct: 295 MQ----TGDVPAT----WANADLIHALTGYKPNTPFREGVARFVAWYRD 335 >gi|304405552|ref|ZP_07387211.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] gi|304345591|gb|EFM11426.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] Length = 332 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 33/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQS--NLFSFL 55 M+++VTG GFIGS L LVN Q + ++ + N+ L + + N + Sbjct: 8 MKVLVTGADGFIGSHLVELLVN----QGYEVRAFSFYNSFNTWGWLDSLQKDVLNQIEVV 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + ALK + + + AA + S D ++ TNI GT +L+ R Sbjct: 64 TGDIRDANGVYDALKGVE--QVFHLAALIAIPFSYSSPDMYVDTNIKGTLNVLQAAR--- 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + L ST EVYG+ E+ P+ SPYSATK +D L ++ ++ Sbjct: 119 ------RLHLSKILITSTSEVYGTAKYVPMDENHPFQGQSPYSATKIGADRLAESYYRSF 172 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 +P+ + N YGP +IP I++++ G G RD++YV+D V L Sbjct: 173 DMPIAIVRPFNTYGPRQSARAVIPNIISQLLSGKEEIELGSISPTRDFVYVKDTVNGFLK 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI----RFIEDRPGH 290 + + IG+ NI E +G L + +I + + +I R D+ Sbjct: 233 IAESEHTIGQEINIATQKE-------ISVGDLAEVIIKQINPNARIICKEERLRPDKSEV 285 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R + KI W PQ + E G+ TV W +N Sbjct: 286 NRLLG-SNEKIMRLTNWKPQYSFEQGIKDTVEWIKNN 321 >gi|218886408|ref|YP_002435729.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757362|gb|ACL08261.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 330 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 33/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LCR L+ D +VL +D + G+ + ++E+ F L+ DI Sbjct: 13 RILVTGGAGFIGSHLCRRLL-DRGAEVLCVDNF-FTGSRDHVQEMQDHPRFELLRHDI-- 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T + G+ + L Sbjct: 69 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTCVHGSI----------NMLGLA 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + +ED P P S Y K ++ L + +G Sbjct: 114 KRVKARILQASTSEVYGDPETHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFTDYHRQHG 173 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P+ ++ N +GP P +++ I + ++ + +YGDG R + YV+D V L Sbjct: 174 VPIRIARIFNTFGPRMHPNDGRVVSNFILQALQDKPITIYGDGSQTRSFCYVDDMVDGLT 233 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++ GN E + I + EI +++ + S S + +D P RR Sbjct: 234 ALMHAPDDAHLPVNLGNPEERTILNLAEI--IIEFV--NSRSTIDFRPLPQDDP---RRR 286 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ + ++GW P+ +ME GL KTV ++ Sbjct: 287 RPDIAQAREKLGWEPKVSMEEGLRKTVEYF 316 >gi|226227352|ref|YP_002761458.1| nucleoside-diphosphate-sugar epimerase [Gemmatimonas aurantiaca T-27] gi|226090543|dbj|BAH38988.1| nucleoside-diphosphate-sugar epimerase [Gemmatimonas aurantiaca T-27] Length = 322 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 34/332 (10%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS + R++ + +L +L+S +E + + F++ DI Sbjct: 5 VLVTGGAGFIGSHVADRFVAEGWSVTIL--------DDLSSGREENIPSAARFVRGDITS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +++ + D + + AA+ V RS+L T NI+GT L+E R Sbjct: 57 PEAA-TLVRDGRFDVMCHLAAQIDVRRSVLDPAYDATRNILGTLNLMEAIRTSGHATRT- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +YG D +E +P +PY K S +Y + +G +G+ + Sbjct: 115 ------VFSSTGGALYGDFDPPPSAETFSKDPEAPYGIAKLSVEYYLAYYGRVHGLDTVA 168 Query: 182 SNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED-----HVRAL 233 N YGP P ++ + R+++G + ++GDG+ RD++Y D A Sbjct: 169 LRYGNVYGPRQDPHGEAGVVAIFCNRLLDGRPLTVFGDGEQTRDYVYAGDVAAANFAAAT 228 Query: 234 YLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + +GR+ R +NIG E + + + A P I + RPG Sbjct: 229 GALPPRGRLDARAFNIGTGVETSVNTLAETLRAVSQASAP--------IEYAPARPGELA 280 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A+D++K +S +GW P ++ GL T ++ Sbjct: 281 RSALDTAKAQSVLGWKPAVSVRQGLENTYAFF 312 >gi|20559811|gb|AAM27586.1|AF498403_5 ORF_5; similar to NAD dependent epimerase/dehydratase f [Pseudomonas aeruginosa] Length = 326 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 151/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV + +++ L + Y G L + + Q L D+ Sbjct: 3 KVLVTGADGFIGSHLTELLVGEGYEVKALSQYNSFNYWGWLEDVACLKQ---IEVLNGDV 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + K+ D + + AA + S + D ++ TN+ G + C + Sbjct: 60 RDPHYCKKITKDV--DVVFHLAALIAIPYSYVAPDSYLETNVKGVLNI---------CQA 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ E P P SPYSA+K ++D + +++ + + +PV Sbjct: 109 ALENGVQRVVHTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIAADAMAMSFFNAFDLPV 168 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLK 238 ++ N YGP +IP I ++ +G GD RD+ YV D R L L Sbjct: 169 TIARPFNTYGPRQSARAVIPTIIAQIAKGMKQIKLGDVFPTRDFNYVIDTCRGFLELARC 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRRY 294 + IGE NIG N E D + I L+ + + F+ D RP + Sbjct: 229 EKAIGETVNIGSNYEISVGDTLKLIRELMGS----------DVEFVTDDQRLRPEKSEVF 278 Query: 295 AI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + D+SKI G+ P ++ GL +T+ NW+ RP Sbjct: 279 RLWCDNSKIHELTGFEPTYSIREGLQETI------NWFVRP 313 >gi|221209614|ref|ZP_03582595.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD1] gi|221170302|gb|EEE02768.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD1] Length = 381 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C LV + V+ +D L LN + ++ S F FL+ D+ Sbjct: 60 RVLVTGGAGFLGSYVCERLVVE-GAHVVCVDSLLTGRKLN-VADLKASGRFEFLKADVT- 116 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L + Q D I N A + + TN++G C++ Sbjct: 117 -----LGLPQLQVDEIWNLACAASPPTYQHDPVHTMMTNVLG----------MNHCVALA 161 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 +K R Q ST E+YG D + + Y P + Y K +++ L + T Sbjct: 162 RKTGARVFQASTSEIYG--DPSVHPQMETYRGNVNTIGPRACYDEGKRAAEALCYDYYRT 219 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ V ++ N YGP P +++ I + G + +YGDG R + +V D + Sbjct: 220 YGVDVRVARIFNTYGPRMSPRDGRVVSNFIVGALNGEPLEIYGDGLQTRSFCFVSDLIDG 279 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI-RFIEDRPGH 290 + ++ R +G NIG E I++ ++ L + SH+E++ R + H Sbjct: 280 FFCLMGAERNVGMPVNIGNPVEFTMIELAQKVLAL-------TGSHSEIVFRPLPIDDPH 332 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 RR D S +E+GW P +++ GL +TV Y W P+ + Sbjct: 333 QRR--PDISVAATELGWRPCVDLDEGLRRTV-DYFARELWIAPMLQ 375 >gi|312880544|ref|ZP_07740344.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] gi|310783835|gb|EFQ24233.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] Length = 331 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 148/334 (44%), Gaps = 25/334 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV--- 57 M ++VTG GFIGS L LV + + V + G+ L I+ L + L V Sbjct: 1 MSVLVTGADGFIGSHLAEALVREGYV-VRAVGLYNSLGSWGWLDRIA-PELATKLDVALG 58 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R A++ + A+++ AA + S D +I TN+ GT +L+ R Sbjct: 59 DVRDPRWVRGAMEGCE--AVLHLAALIAIPYSYRAPDSYIDTNVKGTLNVLQAAR----- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + ST EVYG+ E+ P SPYSA+K ++D L ++ ++G+ Sbjct: 112 ----ELGVRRVIHTSTSEVYGTARYVPIDENHPLQGQSPYSASKIAADQLAYSFYASFGV 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV+ N YGP +IP I+++ G+ G RD+ YV D V L Sbjct: 168 PVVTVRPFNTYGPRQSARAVIPTIISQIASGAREIRLGALSPTRDFNYVADTVSGFLAAL 227 Query: 238 KK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +GE N+G N E I I + D + K E R +R +A Sbjct: 228 ASDAGVGEVANLGSNYE---ISIGELAELIADVMGAKVSICCEEERLRPKNSEVERLWA- 283 Query: 297 DSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 D+ K GW P+ E + GL +TV W+ D Sbjct: 284 DNRKAMELFGWEPKYAGREGLRRGLEETVRWFSD 317 >gi|242398639|ref|YP_002994063.1| UDP-glucose 4-epimerase [Thermococcus sibiricus MM 739] gi|242265032|gb|ACS89714.1| UDP-glucose 4-epimerase [Thermococcus sibiricus MM 739] Length = 308 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 161/330 (48%), Gaps = 41/330 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD- 61 ++VTGGAGFIGS + L D V++ID L YAG + ++ N+ F++ DI D Sbjct: 7 IVVTGGAGFIGSHIAEELSKDN--DVIIIDNL-YAGKIENI----PPNV-KFIRADIRDY 58 Query: 62 ---RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 E I A F A+V+ V+R +L + N++GT +L+ L Sbjct: 59 KSMAELISQADYVFHEAALVSVV--ESVERPLLTEE----INVLGTLNVLK-------AL 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S+ +F+ S+ VYG E P SPY TK S++Y + YG+P Sbjct: 106 SEG---HGKFIFASSAAVYGDNQNLPLKESEKPKPLSPYGITKVSAEYYCKVFYELYGVP 162 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +G Y+ +I + I R ++G + +YGDG+ RD++YV+D V+A L Sbjct: 163 TVSLRYFNVFGERQGYNQYAGVISIFINRALKGEPLIIYGDGKQTRDFIYVKDVVKANIL 222 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + + G+ +N+ ER +I E+ + + S S I F + RPG R Sbjct: 223 AAESSKANGKVFNV-AKGERTSI---LELALKIIEITGSSSS----IIFDKPRPGDIRHS 274 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+I ++G+ P+ +++ GL KTV WY Sbjct: 275 QADISEIM-KLGFKPEYSLKEGLLKTVEWY 303 >gi|289549805|ref|YP_003470709.1| UDP-glucose 4-epimerase [Staphylococcus lugdunensis HKU09-01] gi|289179337|gb|ADC86582.1| UDP-glucose 4-epimerase [Staphylococcus lugdunensis HKU09-01] Length = 312 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 35/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS + + I+V VID L+ +G L+++ I + ++F D+ Sbjct: 1 MKALITGGAGFIGSHVAEKFSKE-GIEVFVIDNLS-SGFLDNIPFIDKEHIFI---KDVT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +K +Q D +++ AA V ++ E NI T LLE R W S L Sbjct: 56 DFNFVTELIKVYQFDYVIHLAAMVSVVETVEKPIESNQVNIDSTINLLEACRKWNSNLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F+ S+ VYG L + S Y P SPY+ K S + V + Y +P Sbjct: 115 ------KFIFASSAAVYGDLPELPKSVSQSYICPLSPYAIQKFSGEQYVKIYNSLYNVPT 168 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YGP P ++ + + YGDG+ RD++Y++D V AL++ Sbjct: 169 SCLRFFNIYGPKQNPTSDYSGVLSILNNKFSHNQTFTFYGDGKQTRDFVYIDDLVAALWM 228 Query: 236 VLKKGRI-GERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 VL G YN+G ++ D+ FE SY ++ +R+ R G D Sbjct: 229 VLNHSCTNGLIYNVGTGHQTTLNDVFKAFE----------NSYGYSIPVRYEPPRVG-DI 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++++ K ++G+ PQ + +G + YLD N Sbjct: 278 KHSLADIKPLQQLGYTPQYTISTG----IAAYLDYN 309 >gi|224007781|ref|XP_002292850.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971712|gb|EED90046.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 405 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 35/339 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQS----- 49 +++VTGGAGFIGS + L+ + V+V+D++ NL L+E ++ Sbjct: 65 KVVVTGGAGFIGSHVAHALL-ERGDDVVVVDEMNDYYDVSIKEDNLQLLREKAKEMESED 123 Query: 50 --NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 + + DI ++ + ++ QP+ I + AA + V SI ++ N+ GT + Sbjct: 124 RKERLAIYKGDINNQTLMHGLFEQEQPEWICHLAARAGVRPSIEDPLLYVKANVQGTTNM 183 Query: 108 LEETRLWWSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSD 165 LE +R + + R + S+ VYG + FSE N P SPY+ATK S + Sbjct: 184 LEYSRAY----------KVRNVVMASSSSVYGESESTYFSEAEDVNQPVSPYAATKRSGE 233 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 + + + YG+ V YG P+ I+R+ G + YGDG RD+ Y Sbjct: 234 LIAYTYHNLYGLNVTNLRFFTVYGARGRPDMAPFKFISRVTRGDQIEQYGDGSTSRDYTY 293 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 VED V + + + + +N+G + K + + +L+ K I+ + Sbjct: 294 VEDIVDGVIRAIDRPYPYQIFNLGKGSGTKLSEFI--------SLVEKHVGKKANIKLLP 345 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++PG D SK + +G+ ME G+ +TV WY Sbjct: 346 EQPGDVPFTNADVSKAQRLLGYESTVTMEEGIKRTVAWY 384 >gi|78061718|ref|YP_371626.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383] gi|77969603|gb|ABB10982.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383] Length = 335 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 153/344 (44%), Gaps = 37/344 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C LV + V ID L LN + ++ S F F++ D+ Sbjct: 14 RVLVTGGAGFLGSYVCERLVME-GASVTCIDSLLTGRKLN-VADLKASGRFEFVKGDVS- 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L + Q D I N A + + + TN++G CL+ Sbjct: 71 -----LGLPQLQVDEIWNLACAASPPTYQIDPVHTMMTNVLG----------MNHCLALA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHTYG 176 +K R Q ST E+YG D +E N P + Y K +++ L + T+G Sbjct: 116 RKTGARVFQASTSEIYGDPDVHPQTETYRGNVNTIGPRACYDEGKRAAEALCYDYYRTHG 175 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 I V ++ N YGP P +++ I + G+ + +YGDG+ R + + D + + Sbjct: 176 IDVRVARIFNTYGPRMSPRDGRVVSNFIVGALNGAPLEIYGDGKQTRSFCFASDLIDGFF 235 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI-RFIEDRPGHDR 292 ++ R +G NIG E I+ L + ++ + S +E++ R + H R Sbjct: 236 CLMSAERNVGTPVNIGNPGEFTMIE-------LAEKVLAMTGSKSEIVFRPLPIDDPHQR 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 + D S +E GW P +++ GL +TV Y W P+ + Sbjct: 289 KP--DISVASTEFGWRPGIDLDEGLRRTV-DYFSRELWLAPVLR 329 >gi|152984520|ref|YP_001347351.1| NAD-dependent epimerase/dehydratase [Pseudomonas aeruginosa PA7] gi|150959678|gb|ABR81703.1| NAD-dependent epimerase/dehydratase [Pseudomonas aeruginosa PA7] Length = 326 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 45/344 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAG---NLNSLKEISQSNLFSFLQ 56 +++VTG GFIGS L LV + +++ L + Y G ++ LKEI L Sbjct: 3 KVLVTGADGFIGSHLTELLVGEGYEVKALSQYNSFNYWGWLEDVACLKEIE------VLN 56 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + K+ D + + AA + S + D ++ TN+ G + Sbjct: 57 GDVRDPHYCKKITKDV--DVVFHLAALIAIPYSYVAPDSYLETNVKGVINI--------- 105 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + + R + ST EVYG+ E P P SPYSA+K ++D + +++ + + Sbjct: 106 CQAALENGVQRVVHTSTSEVYGTAQYVPIDEKHPLQPQSPYSASKIAADAMAMSFFNAFD 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 +PV ++ N YGP +IP I ++ +G GD RD+ YV D R L L Sbjct: 166 LPVTIARPFNTYGPRQSARAVIPTIIAQIAKGMKQIKLGDVFPTRDFNYVIDTCRGFLEL 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHD 291 + IGE NIG N E D + I L+ + + F+ D RP Sbjct: 226 ARCEKAIGETVNIGSNYEISVGDTLKLIRELMGS----------DVEFVTDDQRLRPEKS 275 Query: 292 RRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + + D+SKI G+ P ++ GL +T+ NW+ RP Sbjct: 276 EVFRLWCDNSKIHELTGFEPTYSIREGLQETI------NWFVRP 313 >gi|116329444|ref|YP_799164.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329952|ref|YP_799670.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122188|gb|ABJ80231.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123641|gb|ABJ74912.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 318 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 37/338 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK---IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+ ++TG AGF+G YL+ +LK L I ++ E+ QS + F+ Sbjct: 1 MKCLITGAAGFVGG----YLLKELKESYTDFLGIGIQPPGPDIEKDPELPQS--YRFVVC 54 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + + S + EF P+ + + AA+ V R++ E + N+ GT LLE R Sbjct: 55 DIRNIDQVHSVVHEFSPNTVFHLAAQPFVPRAVEDPGETLEINVQGTLNLLESLR----- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF--SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K++ RF+ IS+ +VYG++ + E + P +PYS++K ++ L + H + Sbjct: 110 ---SLKERVRFIYISSSDVYGNIPESCLPVQESVIPAPLNPYSSSKFCAEIYCLQY-HRW 165 Query: 176 GIP---VLLSNCSNNYGPYHFPEKLIP------LAITRMIEGSHVFLYGDGQNVRDWLYV 226 IP V+++ N+ GP P ++P L + E L GD + RD+L V Sbjct: 166 -IPELEVVIARPFNHTGPKQSPNFVVPNFCFQVLEALKRPESERKILVGDLSSTRDFLDV 224 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D VRA ++ +KG+ GE YNI E DI+ E+ IP + RF Sbjct: 225 RDVVRAYRILSEKGKPGEIYNICSGKETVIRDILDEVISASGRKIPVEVDPS---RF--- 278 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R RR + K++ ++GW P ++ + W+ Sbjct: 279 RSAEMRRLFGNKDKLQ-KLGWAPNFDLSDTIQDVYHWH 315 >gi|149185315|ref|ZP_01863632.1| NAD-dependent epimerase/dehydratase [Erythrobacter sp. SD-21] gi|148831426|gb|EDL49860.1| NAD-dependent epimerase/dehydratase [Erythrobacter sp. SD-21] Length = 332 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 38/344 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK----EISQSNLFSF 54 MR++VTG AGFIG+A+ L +VL ID L Y +L + E + F+F Sbjct: 1 MRILVTGAAGFIGAAVAERLCTRGD-EVLGIDSLNDYYQVSLKRDRVAHVEDGAAGRFAF 59 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 QVD D + +AL+ D IV+ A++ V S+ ++ N++G LLE R Sbjct: 60 KQVDFADWSALSAALEGESFDRIVHVGAQAGVRYSLENPRAYVEANLLGHLNLLEVARAR 119 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 S + S+ VYG ++ F+ ED +P S Y+ATK + + + + H Sbjct: 120 GSS---------HMVYASSSSVYGGNEQLPFAVEDRVDHPVSLYAATKRADELMSETYAH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YGIP+ YGP+ P+ L +++G + ++ G+ RD+ Y++D V + Sbjct: 171 LYGIPLTGLRFFTVYGPWGRPDMAAWLFTEAILKGEPIKVFNKGEMWRDFTYIDDIVAGV 230 Query: 234 YLVL----------KKG---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + K G + YNI GN+ + + V E LI ++ Sbjct: 231 LACIDSPPANDGAPKPGGSTKAHALYNI-GNHRSEKLTRVIE-------LIEEACGRKAK 282 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG R D I+ ++G+ P +E G+ K V WY Sbjct: 283 VELLPMQPGDVARTYADIDAIQRDLGYQPTTRIEDGIPKFVEWY 326 >gi|219116725|ref|XP_002179157.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409048|gb|EEC48980.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] Length = 397 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 153/341 (44%), Gaps = 42/341 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 +++VTGGAGFIGS + L+ + V++ID++ +L+ I QSNL LQ Sbjct: 48 KVLVTGGAGFIGSHVADVLL-ERGDDVVIIDEMNDYYSLD----IKQSNL-KLLQSKYGN 101 Query: 58 --------DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 D+CD E + + + P + + AA + V SI +I +NI GT L+E Sbjct: 102 DRLKIYFGDVCDEELVTNIFETEHPTWVCHMAARAGVRPSIQDPYVYIHSNIKGTTRLME 161 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLV 168 LS Q F+ S+ VYG FSED + NP SPY+A+K + + L Sbjct: 162 --------LSAKYGVQ-NFVFASSSSVYGGSKSTFFSEDEVVDNPVSPYAASKKACELLA 212 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + H Y + YGP P+ I R+ G + +GDG + RD+ Y+ D Sbjct: 213 YTYHHLYNLNTTGLRFFTVYGPRGRPDMAPFKFIDRVSRGVEIQQFGDGSSSRDYTYISD 272 Query: 229 HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V + + + + +N+G G + R+ ID L+ K I+ + Sbjct: 273 IVDGVVRAIDRPYRYQIFNLGKGSGTSLREFID-----------LVQKHVGQKAKIKILP 321 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+PG D SK +G+ + + E G+ T WY D Sbjct: 322 DQPGDVPYTCADVSKAARLLGYESEVSFEDGIRLTAEWYKD 362 >gi|260461383|ref|ZP_05809631.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259032920|gb|EEW34183.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 357 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 103/357 (28%), Positives = 157/357 (43%), Gaps = 49/357 (13%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDICDR 62 + GG+GFIGS L L++D + VLVID L+ G +L+ ++Q + S VDI D+ Sbjct: 15 IVGGSGFIGSNLADSLLSDGE-PVLVIDNLSRPGVEQNLQWLAQKHGSHLSVETVDIRDQ 73 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + SAL + AI + AA++ V S+ E + N+ GTF +LE RL Sbjct: 74 SSLVSALAPAK--AIFHLAAQTAVTTSLRDPTEDLDINLKGTFNVLEAARLA-------- 123 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS------------------SPYSATKAS 163 + ST++VYGSL + E D Y PS +PY +K + Sbjct: 124 --SVPVVFASTNKVYGSLPQVAVREADDRYEPSDEAIRANGVDETIGLNFCTPYGCSKGA 181 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNV 220 +D VL + +YG+P + S YGP F + + + + G + +YGDG+ V Sbjct: 182 ADQYVLDYAKSYGLPTAVLRMSCIYGPRQFGTEDQGWVAHFLLSALSGRPITVYGDGKQV 241 Query: 221 RDWLYVEDHVRALYLVLKKGRI----GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD L+V D V A +L RI G+ +N+GG + LL + + Sbjct: 242 RDILHVSDAVAAYRGLL--ARIEDLKGQAFNLGGGPRN-----AVSLRTLLSEIAAITGR 294 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 L R R G + D+ KI+ +GW G+ W L + P Sbjct: 295 DVAL-RHDLQRTGDQPFFVADTRKIEDALGWRAHVPWREGVRDLAGWLLRHRLQPAP 350 >gi|254526965|ref|ZP_05139017.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str. MIT 9202] gi|221538389|gb|EEE40842.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str. MIT 9202] Length = 340 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL-----NSLKEISQS--NL 51 MR++VTG AGFIG LC+ L+ +L +V+ D + Y NL + LK+ S++ + Sbjct: 1 MRILVTGAAGFIGFHLCKKLL-ELNKEVIGFDNVNDYYERNLKYSRLSFLKDFSENTKSK 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F + ++ D ++ K+ +PD + N A ++ V SI +I +N++G +LE Sbjct: 60 FTFYEKNLEDNIALKEVFKKHEPDIVFNLAGQAGVRYSIENPSSYIQSNLVGFGNILE-- 117 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 SC K+ + S+ VYG FSED + P S Y+ATK +++ + + Sbjct: 118 ----SCKESKVKN---LIYASSSSVYGGNRSYPFSEDQSVDHPVSLYAATKKANELMAHS 170 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y IP + YGP+ P+ + + E + ++ GQ +RD+ Y++D + Sbjct: 171 YSHIYKIPTIGLRFFTVYGPWGRPDMALFSFTKSIYEKKPIRIFNHGQMIRDFTYIDDII 230 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 L ++KK +NIG +N + + E I Sbjct: 231 ECLIRIIKKPPKPNPKYDHLKVESSSSWAPYKIFNIGNSNPVNLMTYIEE--------IE 282 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ F E +PG ++ + K+ S IG+ P+ ++ G+ + V WY Sbjct: 283 KATGIKAKKIFTEMQPGDVKKTFACTDKLDSWIGFTPKTKIKEGIYEFVKWY 334 >gi|302347865|ref|YP_003815503.1| NAD-dependent epimerase/dehydratase [Acidilobus saccharovorans 345-15] gi|302328277|gb|ADL18472.1| NAD-dependent epimerase/dehydratase [Acidilobus saccharovorans 345-15] Length = 309 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/336 (28%), Positives = 143/336 (42%), Gaps = 47/336 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGGAGFIGS L R L+++ V+V+D L+ N + D+ Sbjct: 1 MKFIVTGGAGFIGSNLSRLLLSEGH-DVIVVDDLSSGARENVPAGAR------LVIGDVS 53 Query: 61 DRECIRS--ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 DR + A+ AIV+ AA S V + + N++GT +L+ R Sbjct: 54 DRRALEGVEAMARGDEVAIVHLAAVSGVVEAREDPSRAVRANVLGTQEVLDMAR------ 107 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D + + S+ VYG + ED P P+S Y TK + L YG+ Sbjct: 108 ---RLDAYVTIA-SSAAVYGDVSDVPVKEDAPLRPTSLYGLTKLFDEQLAEQAYRDYGLR 163 Query: 179 VLLSNCSNNYGP-----------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 N YGP Y+F E I G +YGDG N RD++YV+ Sbjct: 164 SSYLRLFNVYGPGMRRGPYASVIYNFMEA--------AIRGLRPVIYGDGLNTRDFVYVD 215 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 D RA +++ G +N+G E +D++ LI K F E R Sbjct: 216 DVARAFVEAVRRRATGP-FNVGTGREVSVLDLL--------RLISKVAGVELRPEFREPR 266 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 PG RR D S+ + +GW P+ ++E GL T + Sbjct: 267 PGDIRRSCADVSRARESLGWEPRVSLEEGLRLTYSY 302 >gi|228999302|ref|ZP_04158882.1| Nucleotide sugar epimerase [Bacillus mycoides Rock3-17] gi|229006857|ref|ZP_04164490.1| Nucleotide sugar epimerase [Bacillus mycoides Rock1-4] gi|228754479|gb|EEM03891.1| Nucleotide sugar epimerase [Bacillus mycoides Rock1-4] gi|228760499|gb|EEM09465.1| Nucleotide sugar epimerase [Bacillus mycoides Rock3-17] Length = 315 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M++++TGGAGFIGS L L+ K QV+++D YA + L+++ + F + Sbjct: 1 MKVLITGGAGFIGSHLALKLLEQGK-QVVLLDNFHSYYAKSRKQFQLEQVQRYGNVPFYE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI +E +++ +++ + DA+++ A V S+ ++ NI GT +L + Sbjct: 60 CDILHKEDVKAVMQQEKIDAVIHLAGFPGVRPSLEMPGAYVDINIKGTSNVL-------T 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 C ++ + S+ VYG E+M SPY+A+K ++ L A+ + Y Sbjct: 113 CAGEENVKHV--IVASSSSVYGEQMGMPLKEEMANGRVLSPYAASKYGAESLCHAYQYMY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G + + YGP+ P+ I +++ G + +YG G RD+ Y++D + L Sbjct: 171 GFQMNILRFFTVYGPWGRPDMAIASFTRKLLNGEEIIVYGKGTG-RDYTYIDDITEGIAL 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ R + YN+G N L+ L+ + H L+R R GH + Sbjct: 230 TLESNR-SDVYNLGSNAP-----------ILMTELLTQLEKHFPLMRV--RREGHRKGDV 275 Query: 296 I----DSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK K ++G+ P+ + GL +T+ W Sbjct: 276 TSTWADISKAKEQLGYEPRVSFAEGLERTIAW 307 >gi|297531515|ref|YP_003672790.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] gi|297254767|gb|ADI28213.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] Length = 334 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG + L+ + +V+ ID L Y L + L E+ + + F+F+Q Sbjct: 1 MTILVTGAAGFIGMHFSKRLLEE-GYEVVGIDNLNDYYDPKLKEDRLLELKKYSRFTFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + + + +V+ AA++ V S+ ++ +NI+G +LE R Sbjct: 60 LDLADREGLFALFRNYAFTHVVHLAAQAGVRYSLQNPYAYVDSNIVGFVNILEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ K FS D +P S Y+ATK +++ + + H Y Sbjct: 116 -----HNPVNHLIYASSSSVYGANAKMPFSTSDNVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ ++EG + ++ G RD+ Y++D V + Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMAYFSFTKNILEGKPIKVFNHGNMKRDFTYIDDIVEGMAR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L + + YNIG N K +D + + LL K Sbjct: 231 LLDRPPLPNEQWDRFHPDPSSSYAPYKIYNIGHNQPVKLLDFIQTLESLLGVEAKK---- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D + +G+ P +++ GL + V WY Sbjct: 287 ----EFLPMQPGDVEATYADIDDLHQAVGFQPSTSIQDGLKRFVDWY 329 >gi|227543970|ref|ZP_03974019.1| possible dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri CF48-3A] gi|227186052|gb|EEI66123.1| possible dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri CF48-3A] Length = 129 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 8/121 (6%) Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 LYG G+NVRDW++ DH RA++ +L KG+IGE Y IG + E+ N + V E+ L Sbjct: 1 LYGSGKNVRDWIHTNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPK 59 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 +Y H ++DRPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW Sbjct: 60 DAYDH------VKDRPGHDLRYAIDATKLRTELGWEPEFTDFKTGLQHTIDWYTEHQDWW 113 Query: 332 R 332 + Sbjct: 114 K 114 >gi|226314917|ref|YP_002774813.1| dTDP-glucose 4,6-dehydratase [Brevibacillus brevis NBRC 100599] gi|226097867|dbj|BAH46309.1| putative dTDP-glucose 4,6-dehydratase [Brevibacillus brevis NBRC 100599] Length = 336 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 27/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLN-SLKEISQS-NLFSFLQV 57 +++VTG GFIGS L LV ++ ++ G L+ S EI++ N+F+ Sbjct: 7 KILVTGADGFIGSHLVEELVRQGYDVCAFVNYNSFNSWGWLDHSPHEITKELNVFAG--- 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D ++ A+ + D +++ A+ + S D ++ TNI GT +L+ R Sbjct: 64 DVRDPYGVKKAMTGY--DVVLHLASLIAIPYSYHSPDTYVDTNIKGTLNVLQAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + ST EVYG+ +E+ P SPYSA+K +D L L++ +++ + Sbjct: 117 ----ELNIEKVVHTSTSEVYGTAKFVPITEEHPLQGQSPYSASKIGADQLALSFYNSFNL 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + N YGP +IP IT++ G G RD+ YV+D V V Sbjct: 173 PVSIIRPFNTYGPRQSARAVIPTIITQIASGEKAIKLGSIHPTRDFNYVKDTVNGFISVA 232 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K + IGE NIG N E I I + + + TE R ++ +R +A Sbjct: 233 KSEKSIGEVINIGSNYE---ISIGETANLIAELMSVNIEILTEDQRLRPEKSEVERLWA- 288 Query: 297 DSSKIKSEIGWFP----QENMESGLNKTVCWY 324 D++K K +GW+P ++ + GL +T+ W+ Sbjct: 289 DNTKAKELLGWYPTYGERDGFKRGLKETIDWF 320 >gi|254478563|ref|ZP_05091937.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035492|gb|EEB76192.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 311 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + V+++D NL++ KE + F + DI Sbjct: 1 MKVLVTGGAGFIGSNIVDLLIGNGH-GVVIVD------NLSTGKEEFINKKAIFYKKDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE +PD +++ AA+ V +S+ NI+GT LLE R Sbjct: 54 DDDLYEIFEKE-EPDYVIHQAAQIDVQKSVNNPAFDAKVNILGTVNLLECCR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ + E NP S Y +K ++++ + YG+ Sbjct: 105 -KSGVKKIVYASSAAVYGNPEYLPIDEVHKINPISYYGISKHTAEHYFEVYSQLYGLKYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + I +M++G ++GDG+ RD++YV+D +A L L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFIDKMLKGERPIIFGDGKQTRDFVYVKDVAKANLLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+G E NI N ++V + +++ + Y+ E R G +D Sbjct: 224 KRGD-NEVVNISTNKPTSINELVEIMNKIMNTSLKPIYT--------EPRKGDIIHSYLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K +GW P+ ++E GL +T+ +Y Sbjct: 275 NKKALEVLGWKPEYSLEDGLRETIEYY 301 >gi|229094369|ref|ZP_04225443.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-42] gi|228689047|gb|EEL42872.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-42] Length = 329 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 35/341 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 ++TG AGF+G L + L+ + QV+ ID + Y NL L+ + F+F++ DI Sbjct: 1 MITGAAGFVGYFLSKKLL-EQGCQVIGIDNINDYYDVNLKYARLENLKPYENFTFIKGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ I +E++P+ +VN AA++ V SI D +I +NIIG + +LE R + Sbjct: 60 SDKDMIVKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACRHYPVD-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYG+ K F E D NP S Y++TK S++ + + H Y IP Sbjct: 118 -------HLVYASSSSVYGANKKVPFEETDYVDNPVSLYASTKKSNELMAHTYSHLYKIP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQN--VRDWLYVEDHVRAL 233 YGP P+ + T E +F GD +N RD+ Y++D V + Sbjct: 171 ATGLRFFTVYGPMGRPD-MAYFGFTNKYFNDESIKIFNNGDFENDLYRDFTYIDDIVEGI 229 Query: 234 YLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 +L I + +NIG NN K ++ I L AL S S I F ++ Sbjct: 230 QRLLSNPPIEDVKHTVFNIGNNNPEK---LMVFIKALEKAL---SNSLGRAIEFKKEFEP 283 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG + ++ + + P+ ++E GL + WY+D Sbjct: 284 IKPGDVPATYASTDLLQKAVDFKPETSIEKGLQEFTNWYVD 324 >gi|121998958|ref|YP_001003745.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1] gi|121590363|gb|ABM62943.1| NAD-dependent epimerase/dehydratase [Halorhodospira halophila SL1] Length = 336 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 155/347 (44%), Gaps = 40/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL------FSF 54 MR++VTG AGFIG R L+ + QV+ ID L ++ +LKE L F F Sbjct: 1 MRILVTGVAGFIGMHCARQLI-EAGHQVVGIDNLNDYYDV-TLKEARLDELRRCEGDFYF 58 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +VD+ D + + +E + D +++ AA++ V S+ +I +N++G +LE R Sbjct: 59 ARVDLADSAGVDALFREGRFDRVIHLAAQAGVRYSLENPRAYIDSNLVGFGNILEGCR-- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 D + S+ VYG+ + FS D +P S Y+ATK S++ + + H Sbjct: 117 -------HHDTGHLVYASSSSVYGANTRMPFSVHDNVDHPVSLYAATKKSNELMAHTYAH 169 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+PV YGP+ P+ + P TR ++ G + +Y G+ RD+ Y++D V Sbjct: 170 LYGLPVTGLRFFTVYGPWGRPD-MAPFKFTRSILAGEPIEVYNYGRMRRDFTYIDDIVDG 228 Query: 233 LYLVL---------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + V+ R Y + + + + I L DA K+ H Sbjct: 229 VLRVMDTLPEPDPEFSTDAPDPARSNAPYRVYNIGNHRPVALEDFIAALEDACGRKAQRH 288 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + + GW PQ +E GL + V WY Sbjct: 289 E-----LPMQPGDVAETYADIDDLTAATGWHPQTAIEQGLPQFVAWY 330 >gi|323143640|ref|ZP_08078314.1| NAD dependent epimerase/dehydratase family protein [Succinatimonas hippei YIT 12066] gi|322416573|gb|EFY07233.1| NAD dependent epimerase/dehydratase family protein [Succinatimonas hippei YIT 12066] Length = 364 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 163/350 (46%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-------------------TYAGNLN 41 M+++VTG AGFIG+AL + L+N + +V+ ID + T A N + Sbjct: 2 MKVLVTGSAGFIGAALVKALLNK-EHEVVGIDNINSYYDQNLKYARLSDAGIETNAINED 60 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L E ++ L+ F+++D+ DR + S + + D ++N A ++ V S+ ++ +NI Sbjct: 61 KLTESKKTPLYRFMKMDLTDRSSMNSLFVKEKFDIVINLAGQAGVRYSVENPFAYVESNI 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 G +LE +C K + S+ +YG D + E D P S Y+AT Sbjct: 121 YGFLNILE------NCRHHPVK---HLIYASSSSIYGMSDHIPYKEEDKTDKPVSLYAAT 171 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K + + + ++ YGIP YGP+ P+ L + ++EG + ++ G Sbjct: 172 KKADELMAYSYSKLYGIPATGLRFFTVYGPWGRPDMAPFLFMKSILEGKPIHVFNHGNMQ 231 Query: 221 RDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+ Y++D + + L+L+ + + YNIG ++ +D + I K Sbjct: 232 RDFTYIDDVICGILLLLEHPANEAVPHQIYNIGHSSPVALMDFI--------ETIEKETG 283 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ +PG D S+++ + + PQ ++E G++ WY++ Sbjct: 284 RKAILKMENMQPGDVCCTYADISRLQHDFSFNPQISIEQGIHAFYEWYMN 333 >gi|315503009|ref|YP_004081896.1| nad-dependent epimerase/dehydratase [Micromonospora sp. L5] gi|315409628|gb|ADU07745.1| NAD-dependent epimerase/dehydratase [Micromonospora sp. L5] Length = 335 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 140/330 (42%), Gaps = 23/330 (6%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 ++VTG GFIGS L L +++ LV + AG+ L L + DI Sbjct: 10 VVVTGAGGFIGSHLVEALAAAGHRVRALV--RYNGAGSHGWLDTFGPDQLAGVEVVASDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR ++ + + + AA + S L ++ TNI GT +LE R Sbjct: 68 RDRGMVQRLVD--GASTVYHLAALGGIPYSYLAPQSYVDTNITGTLNVLESAR------- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST EVYG+ +E SPYSA+K +D L ++ ++G+PV Sbjct: 119 --TAGVGRVVVTSTSEVYGTATTVPMTEQHRLRGQSPYSASKIGADKLADSYHLSFGLPV 176 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP I+++ +G V G + RD LYV D V A V Sbjct: 177 VTLRPFNTYGPRQSTRAVIPTIISQLAKGGGVVRLGALRTTRDLLYVTDTVAAFQAVGTA 236 Query: 240 ---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +G + E D+V +I + + P+ +R E R Sbjct: 237 PDDAVVGGVFQAATGRETSVGDLVRKIAAMF-GVQPEVVVTESRLRPAES---EVERLLG 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+ ++S GW P +++ GL TV W+LD Sbjct: 293 DAGLLRSRTGWQPATSIDEGLKATVEWFLD 322 >gi|153955092|ref|YP_001395857.1| hypothetical protein CKL_2474 [Clostridium kluyveri DSM 555] gi|219855531|ref|YP_002472653.1| hypothetical protein CKR_2188 [Clostridium kluyveri NBRC 12016] gi|146347950|gb|EDK34486.1| RfbB [Clostridium kluyveri DSM 555] gi|219569255|dbj|BAH07239.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 23/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSLKE--ISQSNLFSFLQV 57 +++ TG GFIGS L L+N ++ V + G L++L + + + +FS Sbjct: 3 KVLATGADGFIGSHLVEKLLNSGYSVKAFVHYNSFNSWGWLDTLPKHMLKEIEIFSG--- 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D+ +R ALK D + + AA + S D ++ TNI GT +L+ + Sbjct: 60 DIRDQNGVREALKNV--DDVYHLAALIAIPFSYYSPDSYVDTNIKGTLNVLQAAK----- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R + ST EVYGS +E+ P SPYSATK ++D L ++ ++ + Sbjct: 113 ----ELNTKRIIITSTSEVYGSAKFVPITEEHPCQAQSPYSATKIAADKLAESFYRSFSL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+ + N YGP +IP IT++ G RD+ YV+D + Sbjct: 169 PITIVRPFNTYGPRQSARAIIPTIITQLFSQKGQIKLGSLSATRDFNYVKDTADGFVEIA 228 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K + +GE NI E ++ E L+ L PK+ E R I R Sbjct: 229 KSDKTVGEVVNIASQREISIKNLAAE---LIKQLNPKAKIICETER-IRPEKSEVSRLLG 284 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + KIK W P+ E G+ +T+ W+ Sbjct: 285 SNEKIKRLTEWVPKFTFEEGIKETIEWF 312 >gi|134045539|ref|YP_001097025.1| UDP-glucuronate 5'-epimerase [Methanococcus maripaludis C5] gi|132663164|gb|ABO34810.1| UDP-glucuronate 5'-epimerase [Methanococcus maripaludis C5] Length = 325 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 29/344 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV--------IDKLTYAGNLNSLKEISQSNLF 52 M+++VTG AGFIG +LC+ L+ D I+ LV D + L+ L + S++N F Sbjct: 1 MKILVTGAAGFIGYSLCKNLL-DENIESLVGIDNLNSYYDPILKEKRLDMLNKFSKNN-F 58 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F ++D+ + + + + PD IV+ AA++ V S+ + +N IGT + E + Sbjct: 59 KFYKIDLDNFKELEDIFSKEMPDLIVHLAAQAGVRYSLENPWAYEYSNNIGTLNIFEIAK 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 K + + + S+ VYG K FSE D P S Y+ATK ++ L + Sbjct: 119 ---------KYNIKKIVFASSSSVYGGNQKIPFSERDNVGKPVSIYAATKKYNELLAHVY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y + ++ YG + P+ +++ G + +Y G RD+ Y+ D V Sbjct: 170 HHLYDMEMVGLRFFTVYGEFGRPDMAYWKFTKKILNGEQIDIYNFGDMNRDFTYISDIVE 229 Query: 232 ALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + + +G +N+GG+N +++ + I LI K + ++ +PG Sbjct: 230 GIKNAINTPNLGYNIFNLGGDNP---VNLEYMIN-----LIEKELGINAIKNYMPIQPGD 281 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D K K I + P+ ++E G+ K V WYL+N W + + Sbjct: 282 VPVTMADLEKSKKMINYRPKVSIEEGIQKFVNWYLENKQWLKDI 325 >gi|264676244|ref|YP_003276150.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni CNB-2] gi|299533420|ref|ZP_07046802.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni S44] gi|262206756|gb|ACY30854.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni CNB-2] gi|298718626|gb|EFI59601.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni S44] Length = 336 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 31/340 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVD 58 +++TG AGFIG + L+ + VL ID L A L E+ F F+++D Sbjct: 4 VLITGCAGFIGMHCAKRLLEQ-GVPVLGIDNLNNYYDVALKHARLAELRPHAHFRFVELD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + E P +++ AA++ V SI D++ +N++G +L+ R Sbjct: 63 LADRQGMADLFAEAAPSKVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQGCR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG + F+E D +P S Y+ATK +++ + ++ H YGI Sbjct: 117 ---KHQVEHLVYASSSSVYGGNTRMPFAESDAVDHPISYYAATKKANELMAHSYAHLYGI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + M+ G + +YG+G+ VRD+ Y++D V + VL Sbjct: 174 PTTGLRFFTVYGPWGRPDMALFKFTKAMLAGESIDVYGEGKLVRDFTYIDDIVEGIMRVL 233 Query: 238 KK------GRIGERYNIGGNNERKNIDIVFEIG-----FLLD--ALIPKSYSHTELIRFI 284 K G N G + I F IG L+D A + + T + + Sbjct: 234 DKPATPDAGYDSRNPNPGTSTAPYRI---FNIGNNSPTVLMDYIAALEGALKITARKQML 290 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D+ +++ +G+ P + +G+ V WY Sbjct: 291 PIQPGDMHSTSADTRALQAWVGFSPAMPVATGVQHFVDWY 330 >gi|147921179|ref|YP_685010.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110620406|emb|CAJ35684.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 306 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/322 (30%), Positives = 149/322 (46%), Gaps = 31/322 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GFIG RYLV+ L + + L+ G + + DI Sbjct: 7 RVLVTGAKGFIG----RYLVDALLNEGAEVTALSTDGAG------PEKEGLRWAGGDITK 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I KE D + + AA S+VD SI TN +GT +LEE R Sbjct: 57 PVSIEGLCKEV--DIVYHLAAISNVDASIRNPIRTFETNAMGTANVLEEAR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +F+ +S+ VYG E P P Y+A+K +++ +V A+G++YGI + Sbjct: 106 KAGVKKFVYVSSAHVYGVPQYLPIDEKHPVVPREAYAASKIAAENIVQAYGNSYGIEYAI 165 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N +GP P LIP I + +E + V G+ + RD+LY+ED VR + L +KG Sbjct: 166 LRPFNIFGPGQDPSFLIPGVIKQALE-NGVIKVGNTEPTRDFLYIEDAVRVMLLAGEKGT 224 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +NIG + K +DIV I +D IP + R G + ++ + Sbjct: 225 --GIFNIGSGQQTKILDIVQRIRDEIDPAIPIVSDQDRM------RAGKIEIPYMYANVL 276 Query: 302 KSE-IGWFPQENMESGLNKTVC 322 + E IGW +++ GL+KT+ Sbjct: 277 RIEAIGWHNSISLDDGLSKTII 298 >gi|119469403|ref|ZP_01612342.1| putative nucleotide sugar epimerase [Alteromonadales bacterium TW-7] gi|119447267|gb|EAW28536.1| putative nucleotide sugar epimerase [Alteromonadales bacterium TW-7] Length = 332 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 37/342 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L +D +V+ +D L Y L L+ I F F++ Sbjct: 1 MKYLVTGAAGFIGNFVAERLCDDGH-EVIGLDNLNDYYDPALKHARLERIKHLTTFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + K Q D +++ AA++ V SI +I +N++G +LE Sbjct: 60 MDLADREGIATLFKNEQFDRVIHLAAQAGVRYSIENPMAYIDSNMVGMATILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG+ K F+E D +P S Y+ATK S++ + + H Y Sbjct: 114 CRHNKVK---HLVYASSSSVYGANTKIPFAEEDRVDHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P T I + ++ +G+ RD+ Y++D V + Sbjct: 171 SLPTTGLRFFTVYGPWGRPD-MAPYLFTDAIANDRPIKVFNNGKMQRDFTYIDDIVEGIV 229 Query: 235 LV------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + + + YNIG N + +++ I + +AL K+ + Sbjct: 230 RIQDVIPAANQQAQTEGSPFYKLYNIGNN---QPVELEIFINCIENALEKKADK-----Q 281 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + G R D S ++SEIG+ P ++++G+ K V W+ Sbjct: 282 YLPMQEGDVVRTFADVSGLESEIGFKPNTDLQNGITKFVSWF 323 >gi|222824235|ref|YP_002575809.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter lari RM2100] gi|222539457|gb|ACM64558.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter lari RM2100] Length = 335 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 158/345 (45%), Gaps = 50/345 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF------- 54 ++++TG GFIGS +LV L +Q + Y S+K +SQ N F++ Sbjct: 3 KILITGADGFIGS----HLVEMLYMQSKDENSPFYG---YSIKALSQYNSFNYWGWLEDI 55 Query: 55 -----LQV---DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI 106 ++V DI D ++ K+ + + + AA + S + D ++ N+ GT Sbjct: 56 ECLKDIEVVCGDIRDPHFCKNITKDVE--ILFHLAALIAIPFSYVAPDSYVDVNVKGTLN 113 Query: 107 LLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDY 166 + C S + + R + ST EVYG+ E P SPYSA+K +D Sbjct: 114 I---------CQSALENNVKRIIHTSTSEVYGTALYVPIDEKHPLQAQSPYSASKIGADT 164 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + +++ + + +P+ ++ N YGP +IP IT++ G+ GD RD+ YV Sbjct: 165 MAMSFYNAFNLPLTIARPFNTYGPRQSARAVIPTIITQIANGARQIKLGDVSPTRDFNYV 224 Query: 227 EDHVRA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 +D L L + IGE NIG N+E D + I L+ + + FI Sbjct: 225 KDTCMGFLELAKCQKAIGEVVNIGSNHEISIKDTLELIKKLMKS----------DVEFII 274 Query: 286 D----RPGHDR--RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D RP + R D+SKIK+ + PQ ++E GL +T+ W+ Sbjct: 275 DTKRIRPENSEVFRLLCDNSKIKNLTNFTPQYDLEKGLAQTIKWF 319 >gi|282848992|ref|ZP_06258381.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294793485|ref|ZP_06758622.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|282581267|gb|EFB86661.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294455055|gb|EFG23427.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 307 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS L L+ +L VLVID L+ G + + E +Q F+++D+ Sbjct: 1 MNICVTGGAGFIGSHLVDRLI-ELGHDVLVIDNLS-TGMRSFVHEDAQ-----FIEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S +EF+P + + AA++ V S+ N+IG +L+ R Sbjct: 54 DPKLL-SVFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + +FL S+ VYG L +ED+ PSS Y TK +++ + + +G+ + Sbjct: 105 -KVNVEQFLMPSSAAVYGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTV 163 Query: 181 LSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP +I + ++EG + ++GDG+ RD++YV+D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIED-RPGHDRRY 294 G+ YNI N G ++ LI ++ S T+ + + ED R G + Sbjct: 224 GNGQCTGIYNISTNK-----------GTSVNELITRFRTISGTDFMVYYEDERIGDIKHS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + G+ +E GL KT+ ++ Sbjct: 273 RLSNVKAERDFGFTATTTLEDGLQKTLEYF 302 >gi|257424267|ref|ZP_05600696.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 55/2053] gi|257426943|ref|ZP_05603345.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429581|ref|ZP_05605968.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 68-397] gi|257432228|ref|ZP_05608591.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus E1410] gi|257435187|ref|ZP_05611238.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus M876] gi|282902719|ref|ZP_06310612.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus C160] gi|282907120|ref|ZP_06314968.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus Btn1260] gi|282912366|ref|ZP_06320162.1| dTDP-glucose 4,6-dehydratase [Staphylococcus aureus subsp. aureus WBG10049] gi|282912985|ref|ZP_06320777.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus M899] gi|282921401|ref|ZP_06329119.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus C427] gi|282922612|ref|ZP_06330302.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus C101] gi|283959576|ref|ZP_06377017.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293498039|ref|ZP_06665893.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus 58-424] gi|293511628|ref|ZP_06670322.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus M809] gi|293550238|ref|ZP_06672910.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus M1015] gi|297589126|ref|ZP_06947767.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus MN8] gi|304380089|ref|ZP_07362810.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|257273285|gb|EEV05387.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 55/2053] gi|257276574|gb|EEV08025.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 65-1322] gi|257280062|gb|EEV10649.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus 68-397] gi|257283107|gb|EEV13239.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus E1410] gi|257285783|gb|EEV15899.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus M876] gi|282314833|gb|EFB45219.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus C101] gi|282315816|gb|EFB46200.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus C427] gi|282323085|gb|EFB53404.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus M899] gi|282324062|gb|EFB54378.1| dTDP-glucose 4,6-dehydratase [Staphylococcus aureus subsp. aureus WBG10049] gi|282330019|gb|EFB59540.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus Btn1260] gi|282597178|gb|EFC02137.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus C160] gi|283789168|gb|EFC27995.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290919285|gb|EFD96361.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291096970|gb|EFE27228.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus 58-424] gi|291465586|gb|EFF08118.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus M809] gi|297577637|gb|EFH96350.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus MN8] gi|302750009|gb|ADL64186.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341325|gb|EFM07243.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436761|gb|ADQ75832.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus TCH60] Length = 326 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 KVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLKLLETIKKYNSHIK 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 118 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 171 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 230 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K +G YNIG +++ IG L KS H F E R G + Sbjct: 231 IMEHKDAVGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEHD----FKEARKGDIKHS 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 283 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|307299314|ref|ZP_07579115.1| NAD-dependent epimerase/dehydratase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915110|gb|EFN45496.1| NAD-dependent epimerase/dehydratase [Thermotogales bacterium mesG1.Ag.4.2] Length = 314 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 42/332 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS + +L++ KI V V+D L+ +G + +L + F + DI D+E Sbjct: 6 LVTGGAGFIGSHVVDHLISSGKIPV-VVDNLS-SGKIENLDPRAL-----FYEQDITDQE 58 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-------ETRLWWS 116 + +P + + AA+ V RS+ +E NIIG+ LL+ + ++ S Sbjct: 59 MMERVFMLHRPTVLFHLAAQISVSRSVREPEEDAMVNIIGSLRLLKIAAKYGLKKVIFSS 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D + +I TDE E++P P SPY K +++ + + G Sbjct: 119 TGGAIYGDDVK--RIPTDE-----------EELP-KPLSPYGIAKYATENYLRFFSSELG 164 Query: 177 IPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 I + +N YGP P ++ + RM+ V ++GDG+ VRD++YV D RA Sbjct: 165 IKYTVLRYANVYGPRQDPYGEAGVVAIFSERMLHNQEVVIFGDGECVRDYVYVGDVARAN 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP-KSYSHTELIRFIEDRPGHDR 292 L ++K NIG I + L D + P YS + + E RPG + Sbjct: 225 LLAIEKCE-NTVINIG-------TGIGTSVNELFDIMKPIAGYSREAVHK--EPRPGDVK 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ + +S +GW P +E G+ +T+ ++ Sbjct: 275 KSILNIERARSLLGWEPSTQLERGIKETIEYF 306 >gi|302387250|ref|YP_003823072.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] gi|302197878|gb|ADL05449.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] Length = 326 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 19/329 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV +++ + G L++L + + + DI Sbjct: 3 KVLVTGADGFIGSHLTETLVERGYEVRAFTFYNSFNTWGWLDTLPDAIKKEI-EIQAGDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R+A+ + ++ + AA + S D ++ TNI GT +L+ R L Sbjct: 62 RDPNGVRNAMTGME--SVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQAAR----SLG 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D R L ST EVYG+ E P+ SPYSATK +D L A+ ++ +PV Sbjct: 116 TD-----RVLVTSTSEVYGTARYVPIDETHPFQGQSPYSATKIGADRLAEAFYRSFSLPV 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK- 238 + N YGP +IP I++++ G+ G RD+ YV+D V + K Sbjct: 171 TIVRPFNTYGPRQSARAVIPSIISQLLSGTMEIRLGSLTPTRDFNYVKDTVNGFIEIEKS 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + +GE NI +K I I G L+ + P++ E R ++ +R + Sbjct: 231 ENTLGEEINIA---SQKEISIGGLAGELISQINPQARIICEPQRLRPEKSEVNRLLG-SN 286 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+K GW + ++ GL KT+ W N Sbjct: 287 KKLKELTGWNQEYSLSLGLEKTIRWMEKN 315 >gi|168699281|ref|ZP_02731558.1| NDP-sugar epimerase [Gemmata obscuriglobus UQM 2246] Length = 309 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 95/327 (29%), Positives = 142/327 (43%), Gaps = 27/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 MR IVTG AGFIGS LC L+ D V ID T Y +KE + ++L Sbjct: 1 MRCIVTGAAGFIGSHLCERLLADGH-AVTGIDCFTDYYP---RPVKERNLAHLIDKPHFT 56 Query: 59 ICDRECIRSALKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + + + A + + AA + + RS L D + N+ T LLE + Sbjct: 57 LRELDLSQGVPADVTAGAEWVFHLAAMAGLTRSWLDFDSYNRHNLTATHRLLESLK---- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + ST VYG G E +P P SPY TK +++ L + +G Sbjct: 113 ----GSPTLKRVIYASTSSVYGKYASG--DESLPTRPGSPYGITKLAAEQLCRVYADEFG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P ++ + YGP PE L I +++G + L GDG VR Y++D V A + Sbjct: 167 VPSVVLRYFSVYGPRQRPEMGYHLFINAILQGKPIKLTGDGLQVRGNTYIDDCVEAT-VR 225 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +N+GG + V E+ L+ +I K +I R G Sbjct: 226 ATQAMPGEAFNLGGG----ELVTVLEVFKKLERIIGKP----AIIERHPARAGDQLSTGA 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K+ +GW P + GL K V W Sbjct: 278 DVTKLFKHLGWKPTTGTDEGLAKQVEW 304 >gi|320160263|ref|YP_004173487.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] gi|319994116|dbj|BAJ62887.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] Length = 309 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 37/329 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG AGF+GSAL LV + V +D L+ L ++ + DI Sbjct: 1 MRFLITGAAGFLGSALANQLVREGH-SVRGLDDLSTGSPDALLPDVH------LTRGDIN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L++ D + + AA V S+L E+ N+ GT L+E R Sbjct: 54 DRPKLWTLLQDV--DCVYHLAARVSVPESVLYPREYNHVNVGGTVTLMEAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + IS+ VYG + SED P SPY+ +K S++Y V G +GI + Sbjct: 104 -DVGVRRVVLISSGAVYGEQEHQPLSEDARPQPRSPYAVSKLSAEYYVNTIGRLWGIETV 162 Query: 181 LSNCSNNYGP-YHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP H P +IP + + + ++GDG RD+++V+D V A+ Sbjct: 163 ILRVFNAYGPGQHLPPVHAPVIPHFLKQAWSNGTIVVHGDGNQTRDYVFVDDVVNAMVAA 222 Query: 237 LKKGRIGER-YNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +I +R N+G E R+ + ++ E+ + SH ++I + G + Sbjct: 223 ASATQINQRIINVGSGTETSVRELVQLILEV----------TGSHPQVI-YNPRNDGGVQ 271 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R D + + +G+ P + GL T+ Sbjct: 272 RMCADITLARELLGYQPTVGLRQGLQLTL 300 >gi|308270325|emb|CBX26937.1| Protein capI [uncultured Desulfobacterium sp.] Length = 345 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 41/346 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVDI 59 +VTG AGFIG L L+ + I V ID L Y +L + L ++++ F+F++ DI Sbjct: 9 LVTGAAGFIGFHLSLRLLKE-GIYVTGIDNLNPYYDVSLKESRLAQLTRYEKFTFVRADI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + D +VN AA++ V S+ +I +NI+G +LE C Sbjct: 68 SDKNATENVFANNRFDVVVNLAAQAGVRYSLKNPHSYINSNIVGFTNILE-------CCR 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F S+ VYG+ K FS D +P S Y+ATK +++ + ++ H YG+P Sbjct: 121 HNHVQHLVFA--SSSSVYGANTKMPFSVHDNVDHPVSLYAATKKANELMAHSYSHLYGLP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 YGP+ P+ + L ++E + ++ G+ RD+ Y++D + + ++K Sbjct: 179 CTGLRFFTVYGPWGRPDMALFLFADAILENKPIKVFNHGKMTRDFTYIDDIIEGVSRIMK 238 Query: 239 K---------------GRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 K G R YNIG N+ + + + LI K+ Sbjct: 239 KVPEPNPGWSGNNPDPGTSYARYKIYNIGNNSPVELMKFI--------ELIEKAVGKKAE 290 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +PG D + ++G+ P +E+G+ + V WY+D Sbjct: 291 MELLDLQPGDVVSTYADVDDLIKDVGFKPDTPLETGIKEFVNWYVD 336 >gi|332295144|ref|YP_004437067.1| UDP-glucose 4-epimerase [Thermodesulfobium narugense DSM 14796] gi|332178247|gb|AEE13936.1| UDP-glucose 4-epimerase [Thermodesulfobium narugense DSM 14796] Length = 322 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 34/342 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG AGFIGS + Y + +VL +D L+ +GN+N++ S F Q DIC Sbjct: 3 KIVVTGAAGFIGSNIVDYWIEKGH-EVLSVDDLS-SGNINNINSKSL-----FFQGDICS 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L EF PD I + AA+ V S+ NI+GT +LE C S+ Sbjct: 56 KKTSKKIL-EFSPDVICHQAAQISVPYSVTHPYIDAKINILGTIRMLE-------CASKL 107 Query: 122 KKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +FL ST +YG + K + +ED + +SPY+ +K +S+ + +G + Sbjct: 108 KA---KFLFASTGGAIYGEI-KDIANEDTEPSATSPYALSKLTSENYIKLMSQKFGFKYV 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGS----HVFLYGDGQNVRDWLYVEDHVRAL 233 + SN YGP P ++ + + +I + F + VRD+++V+D A Sbjct: 164 ILRYSNVYGPRQVPHGEAGVVSIFLENLINKRKSTINTFPEDNEGMVRDYVFVKDVAIAN 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGH 290 L+ + G +NI K I ++DAL +E I + + RPG Sbjct: 224 DRALELDKCGT-FNISTGIPTKTKRI---FSLIVDALKRYGIEVSESISVPNYADARPGD 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RR +DS++ K + W P N++ G+ TV W+L+ R Sbjct: 280 LRRSLLDSNRAKEILKWEPTVNLKEGIELTVKWFLERRGQVR 321 >gi|87310747|ref|ZP_01092874.1| nucleotide sugar epimerase [Blastopirellula marina DSM 3645] gi|87286504|gb|EAQ78411.1| nucleotide sugar epimerase [Blastopirellula marina DSM 3645] Length = 318 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 37/342 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID----------KLTYAGNLNSLKEISQSN 50 M +++TGGAGFIGS L L+ ++ +D K A + ++Q Sbjct: 1 MAILITGGAGFIGSHLIERLLVQSSDDLICLDNFNDYYDPALKRANAALFDDQPRVTQ-- 58 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 ++ D CD + S + Q ++V+ A + V S+ + TN+ GT LLE Sbjct: 59 ----IEADFCDSNAMESLFTQHQIKSVVHLGAYAGVRVSVAQPQLYQQTNVGGTLNLLET 114 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVL 169 R + RFL S+ VYG F+ED P+ P+SPY ATK +++ L L Sbjct: 115 VR---------RHPVQRFLLASSSTVYGRGAAIPFAEDAPHGVPASPYGATKRAAELLGL 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + + PV+ + YGP P+ + + + G+ + L+GDG RD+ +V D Sbjct: 166 TYAELHQTPVVCLRPFSVYGPRLRPDLALTIFAKAIHTGATIPLFGDGTIRRDFTHVSDI 225 Query: 230 VRALYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L L + IGE N+G + + ++ AL+ ++ I + +RP Sbjct: 226 CDGLIAALTAENVIGETINLGHSEPIEMRGLI--------ALLENAFGKKANIERLPERP 277 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + K + + + PQ +E G+ V W+ +W+ Sbjct: 278 EDLPVTFANLQKAQRLLNYEPQVPIEVGIRDYVAWF--QSWY 317 >gi|332708455|ref|ZP_08428431.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] gi|332352786|gb|EGJ32350.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] Length = 318 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 93/326 (28%), Positives = 155/326 (47%), Gaps = 26/326 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 IVTG AGF+GS L L+N + +V+ ID+ Y NL +++ + F ++ DI Sbjct: 5 IVTGAAGFVGSHLVETLLNQGE-RVIGIDQFNDYYDPNLKRRNIENFKEHPAFELIESDI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWSCL 118 + S L + + + + AA++ V S G ++ NI T ILLE Sbjct: 64 QTLDW-GSLLTDVE--VVYHQAAQAGVRASWGDGFRDYTERNINATQILLEA-------- 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++D K R + S+ VYG+ + SE + P SPY TK ++++L L + H +G+P Sbjct: 113 AKDAKHLTRLVYASSSSVYGNAEALPTSETILPQPVSPYGVTKLAAEHLCLLYYHNFGVP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 V YGP P+ + ++ + +YGDG+ RD+ +++D + A L Sbjct: 173 VTALRYFTVYGPRQRPDMAFHKFLKAILTDEAISIYGDGKQTRDFTFIKDIIAANLAAGS 232 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GE +NIGG + D++ I ++ I K+Y IE G R A D Sbjct: 233 TPAAVGEVFNIGGGSRVVLADVLDTIEQIVGHPIKKNY--------IEKAKGDARHTAAD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 +K K+ + + PQ ++ GL + W Sbjct: 285 ITKAKTLLNYQPQVSLSQGLAQEWEW 310 >gi|323488284|ref|ZP_08093533.1| NAD dependent epimerase/dehydratase family protein [Planococcus donghaensis MPA1U2] gi|323398036|gb|EGA90833.1| NAD dependent epimerase/dehydratase family protein [Planococcus donghaensis MPA1U2] Length = 344 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 30/340 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVDI 59 ++TG AGFIG L + L+ D +V+ ID L Y L + L ++ F+F++ DI Sbjct: 13 LITGAAGFIGYYLSKQLL-DSGCKVMGIDNLNDYYDVKLKYDRLSQLESYEKFTFIKGDI 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++E I +E++P+ +VN AA++ V SI D +I +NIIG + ++E R + Sbjct: 72 AEKELIMRLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNVIEACRHYPVD-- 129 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 L S+ VYG+ K F E D +P S Y++TK S++ + + H Y IP Sbjct: 130 -------HLLYASSSSVYGANKKVPFEETDFVDHPVSLYASTKKSNELMAQTYSHLYNIP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQN--VRDWLYVEDHVRAL 233 YGP P+ + T + E +F GD +N RD+ YV+D V + Sbjct: 183 ATGLRFFTVYGPLGRPD-MAYFGFTDKLFADEEIKIFNNGDFENDLYRDFTYVDDIVEGI 241 Query: 234 YLVL------KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +L K G + + +NIG ++ K + + + L + + + +F Sbjct: 242 QRLLINPPSSKAGEVPHKIFNIGNSSPEKLMVFIKTLEKCLSNSLDRKIEFKK--KFEPI 299 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG + ++ IG+ P+ ++E GL + WY + Sbjct: 300 KPGDVSATYASTKLLEEAIGFKPKTSIEEGLQRFTNWYCE 339 >gi|296134321|ref|YP_003641568.1| NAD-dependent epimerase/dehydratase [Thermincola sp. JR] gi|296032899|gb|ADG83667.1| NAD-dependent epimerase/dehydratase [Thermincola potens JR] Length = 308 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 32/335 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + +V+V D L+ N E F QVDI Sbjct: 1 MKVLVTGGAGFIGSHIVDRLILE-GYEVVVADNLSTGSPANINAE------SRFYQVDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + KE +P+ +++ AA++ V + TNI+GT LL+ C++ Sbjct: 54 GDDLQDLFAKE-KPEVVIHHAAQADVQVAQREPVFDSMTNILGTVNLLQ------CCITY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG+ E+ P NP S Y +K + + A+ + + Sbjct: 107 NAK---KLIYASSAAVYGAPCYLPVDENHPVNPISNYGISKYVPELYIKAFHKNFNLNYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP + ++ L R + G +YGDG+ RD+++VED V A L L Sbjct: 164 ILRYANVYGPRQGLKGEGGVVFLFARRFLAGEPPLIYGDGEQTRDFVFVEDIVNANLLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++G G NIG + D+ + + + Y +E RPG ++ D Sbjct: 224 EQGD-GMVINIGTGAQVSVNDLCSRFREIFKSDLRAEY--------LEPRPGDIKKSVFD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 S K+ +GW P ++E+GL +T+ +Y D WR Sbjct: 275 ISLAKNVLGWQPLVSLETGLRQTIEFYRD---IWR 306 >gi|310780516|ref|YP_003968848.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] gi|309749839|gb|ADO84500.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] Length = 321 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 27/336 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL----FSFLQV 57 + +VTGGAGFIGS LC YL+ D +V+V+D ++ + SNL + + Sbjct: 3 KYLVTGGAGFIGSHLCDYLL-DRGHKVVVVDNFNAYYDVEIKERNVGSNLDNPNYKLYRG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + ++ ++ + DA++N AA + + S+ + NI G LLE ++ Sbjct: 62 DIRDIDFLKKIFQDEKIDAVINLAAMAGIRPSLENPMLYEEVNIRGLMNLLELSKANGIN 121 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYG 176 +F+Q S+ VYG+ K F E + + SPY+ATK S + + + + Y Sbjct: 122 ---------KFIQASSSSVYGNNKKVPFKETAVVDFAISPYAATKKSGEVMGHVYHYLYN 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRA 232 I ++ YGP P+ I + G + YGDG RD+ Y++D V++ Sbjct: 173 IDMIQLRFFTVYGPRQRPDLAIHKFTGMITAGEAIPFYGDGTTQRDYTYIDDIIDGIVKS 232 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + + E +N+G E I + +G + + L ++ + + + +PG Sbjct: 233 IRYLENNDNVYEIFNLG---ESHTISLKEMVGTIEEELGIEAKINRQPM-----QPGDVE 284 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + D SK K +G+ P+ + G+ K V WY +NN Sbjct: 285 KTYADISKAKEILGYNPKTEFKDGIRKFVQWYRENN 320 >gi|282849018|ref|ZP_06258407.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|282581293|gb|EFB86687.1| NAD-binding protein [Veillonella parvula ATCC 17745] Length = 365 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-------YAGNLNSLKEISQ--SNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + L + E+S+ N++ Sbjct: 13 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKEYRLQQIDELSKDNKNIW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+ + ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 IFKKGNIADKSFVDEIFAIYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + +K + S+ VYG+ + +S ED NP S Y+ATK S++ L ++ Sbjct: 133 HSY---DDGEKGVEHLVYASSSSVYGANKQIPYSTEDKVDNPVSLYAATKKSNELLAYSY 189 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 190 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRNGGTIKIFNYGNCKRDFTYIDDIVE 249 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG +N +D V + + ++ + Y+ Sbjct: 250 GVSKVMTTAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSAGVLSEDYNF 309 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG D+S ++++ G+ P + GL + WY D Sbjct: 310 EEHKELVPMQPGDVPVTYADTSALEADFGFKPNTTLREGLKRFAIWYKD 358 >gi|49482371|ref|YP_039595.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus MRSA252] gi|221142236|ref|ZP_03566729.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|295426673|ref|ZP_06819312.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|49240500|emb|CAG39157.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus MRSA252] gi|269939655|emb|CBI48023.1| NAD dependent epimerase/dehydratase familyprotein [Staphylococcus aureus subsp. aureus TW20] gi|295129125|gb|EFG58752.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus EMRSA16] gi|329312827|gb|AEB87240.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus T0131] Length = 323 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 3 KVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLKLLETIKKYNSHIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 115 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 168 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 227 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K +G YNIG +++ IG L KS H F E R G + Sbjct: 228 IMEHKDAVGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEHD----FKEARKGDIKHS 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 280 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 311 >gi|206970174|ref|ZP_03231127.1| putative UDP-glucuronate 5'-epimerase [Bacillus cereus AH1134] gi|206734751|gb|EDZ51920.1| putative UDP-glucuronate 5'-epimerase [Bacillus cereus AH1134] Length = 341 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 33/339 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVDIC 60 VTG AGF+G L + L+ + +V+ ID + Y NL L+++ F+F++ DI Sbjct: 14 VTGVAGFVGYFLSKKLL-EQGCKVIGIDNINDYYDVNLKHARLEQLKPYENFTFMKGDIS 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ I +E++P+ +VN AA++ V SI D +I +NIIG + +LE R + Sbjct: 73 DKDMIIKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACRHYPVD--- 129 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + S+ VYG+ K F E D NP S Y++TK S++ + + H Y IP Sbjct: 130 ------HLVYASSSSVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYKIPA 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN--VRDWLYVEDHVRALYL 235 YGP P+ + G + ++ GD +N RD+ Y++D V + Sbjct: 184 TGLRFFTVYGPMGRPDMAYFGFADKYFAGESIKIFNNGDFENDLYRDFTYIDDIVEGIQR 243 Query: 236 VLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----R 287 +L I + +NIG NN K ++ I L AL S S ++ F ++ + Sbjct: 244 LLNNPPIEDVKHKVFNIGNNNPEK---LMVFIKALEKAL---SNSLGRVVEFKKEFEPIK 297 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG + ++ + + P+ ++E GL + WY+D Sbjct: 298 PGDVPATYASTDLLQKTVEFKPETSIEKGLQEFANWYVD 336 >gi|167841169|ref|ZP_02467853.1| NAD-dependent epimerase/dehydratase [Burkholderia thailandensis MSMB43] Length = 329 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 157/343 (45%), Gaps = 35/343 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGG GFIG+AL R L+++ V V+D L+ G L ++ +V Sbjct: 1 MNWLITGGCGFIGTALIRRLLDEGGHAVRVLDNLS-TGTRADLARVAAYEELVHYEVRSA 59 Query: 61 DR--ECIRSALKEFQP--------DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 R E I + + Q D IV+ AA + V S+ + N+IGTF LE Sbjct: 60 PRGVELIVGDIVDAQLAVDVATGCDIIVHLAANTGVVPSLQNPRADLGANVIGTFNYLEA 119 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R + RF+ S+ G ++ + E P P+SPY A+K + + A Sbjct: 120 AR---------RHGIRRFVFASSGASTGEVEPPIHEEIAP-RPASPYGASKLAGEAYASA 169 Query: 171 WGHTYGIPVLLSNCSNNYGP-----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 + H +GI ++ N YGP K I A+ +M + ++GDG RD++Y Sbjct: 170 YKHAFGIDTVMLRFGNVYGPGSARKSSVIAKFIRAALVQM----PLEIHGDGSQTRDFIY 225 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++D V A+ L I GE + I E ++ + L+ ++ T + Sbjct: 226 IDDLVDAVMLASIVPDIGGEVFQIASGAETTIDELAVRLARALERAGIRNLRVTRTDAYA 285 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + G RR++ D++K + +GW P+ +E GL +TV ++LDN Sbjct: 286 Q---GVRRRFS-DTTKARVLLGWQPKVTLEEGLQETVLYFLDN 324 >gi|288573433|ref|ZP_06391790.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569174|gb|EFC90731.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 318 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 33/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 + +VTGGAGFIGS LC L+ D V V+D L+ + N+ L + S DI Sbjct: 7 KALVTGGAGFIGSHLCGVLI-DRGWNVSVVDDLSSSDGSNIEGL-----GDRVSLHVGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ L++ DA+ N AA V +S+ E N+ +LE L Sbjct: 61 RDLDLMKGLLED--SDALFNLAAMVSVPKSVQKPRECYEVNVTAFSDMLE--------LL 110 Query: 120 QDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +D+ + S+ +YG D G E P SPY A+KA + + A +GIP Sbjct: 111 KDRP--VPVVYASSAAIYGEGADDGPRRETELPMPQSPYGASKAMDELVAAAAFRCWGIP 168 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP PE +IP T +++G V ++GDG+ RD+++VED R + Sbjct: 169 SVGLRFFNVYGPRQNPEGPYASVIPRFTTALLDGRAVTVFGDGEQTRDFVHVEDVARVMV 228 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + + IG G+ R +++ V+ +L+ + S E F +RPG R Sbjct: 229 KAADEAQSIGGSVMNVGSGRRASVNEVY-------SLLSRLVSEKESPSFEPERPGDIRH 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+++S + ++E G++ TV +Y Sbjct: 282 SFADLSELRSLMDLSSFRSLEDGIDDTVSYY 312 >gi|83647583|ref|YP_436018.1| nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] gi|83635626|gb|ABC31593.1| Nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] Length = 335 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIGS + L+ D +V+ +D L + SLKE + L F+ + Sbjct: 1 MKVLVTGTAGFIGSHVALRLL-DRGDEVIGVDNLNDYYEV-SLKEARLARLTPYKGFTDV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ DRE I + + +PD +V+ AA++ V SI +++ N++G +LE R Sbjct: 59 RLDVADREGIEALFAKHKPDRVVHLAAQAGVRYSIENPHAYVSANLVGHMNILEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 +K D + S+ VYG+ + FS D +P S Y+ATK S++ + + Sbjct: 116 ----HNKVDHLVYA--SSSSVYGANESMPFSVHDNVDHPLSLYAATKKSNELMSHTYSSL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + + ++I G + ++ G++ RD+ Y++D V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFIFTRKIIAGEPIDVFNYGKHKRDFTYIDDIVEGII 229 Query: 235 LVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L + R YNIG NN +++ I L + L K+ Sbjct: 230 RTLDHVAPSNPDWDGMQPDPGTSKAPYRIYNIGSNNP---VELSRYIEILEECLGKKAER 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +PG D + ++G+ P +E G+ K V WY D Sbjct: 287 N-----LLPMQPGDVPATYADVQALIDDVGYRPSTTVEEGVKKFVEWYRD 331 >gi|88799948|ref|ZP_01115520.1| predicted Nucleoside-diphosphate-sugar epimerase [Reinekea sp. MED297] gi|88777379|gb|EAR08582.1| predicted Nucleoside-diphosphate-sugar epimerase [Reinekea sp. MED297] Length = 333 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 45/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+L+VTG AGFIG+ L L D V+ ID L Y L + LK + + F+F++ Sbjct: 1 MKLLVTGAAGFIGNELALKLT-DAGHDVIGIDNLNDYYDVQLKKDRLKRLDNNPRFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + DR+ + + D I + AA++ V S+ + +I +N++G +LE R Sbjct: 60 MGVEDRQAMADLASQHTFDQIFHMAAQAGVRYSLENPNAYIDSNLVGFGNILELAR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 ++ + S+ VYG +K FSED P + P S Y+ATK S++ + ++ H Y Sbjct: 116 -----QQTVQHLIYASSSSVYGENEKQPFSEDDPVDHPVSLYAATKKSNEVMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ L ++ G + ++ G +RD+ Y++D V Sbjct: 171 SIPTTGLRFFTVYGPWGRPDMAPFLFTDAILAGRPIKVFNHGNMMRDFTYIDDIVDG--- 227 Query: 236 VLKKGRIG-------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+K ++ + NIG + K +D + I + Sbjct: 228 VIKSSQVPPVKTDKPKTDTPADSDAPYQVLNIGNSEPVKLMDFI--------EAIENASG 279 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T F++ +PG D+S ++ + G+ P ++ G+N V WY Sbjct: 280 KTAEKVFMDMQPGDVPVTYADTSLLQQKTGYQPNTAIQDGVNSVVQWY 327 >gi|6933885|gb|AAF31491.1|AF071519_1 putative TDP-glucose dehydratase [Streptomyces noursei ATCC 11455] Length = 186 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 13/145 (8%) Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 +F Q D+CD + + ++E + IV+FAAESH D + L F TN++GT LLE R Sbjct: 52 AFRQGDVCDTAFVSALVEELGIEVIVHFAAESHNDNAYLFPSRFAHTNVMGTVSLLEVVR 111 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYNPSSPYSATKASSDYLVL 169 R +STDEVYG L D F+ D PY P + YSA+KA +D+ V Sbjct: 112 ----------STGVRLHHVSTDEVYGQLALDDTEAFTPDTPYRPRNYYSASKAGADHFVR 161 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFP 194 A + +PV +S+CSNNYGP+ P Sbjct: 162 AAWTQFQLPVTISHCSNNYGPHQHP 186 >gi|297530956|ref|YP_003672231.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] gi|297254208|gb|ADI27654.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] Length = 318 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 29/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL---TYAG-NLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS LC L+ + + V+ +D T A ++ + F+FL+ Sbjct: 1 MNILVTGAAGFIGSHLCEKLLENDEHHVIGVDGFLGPTPAPLKAKNIAHLQSHPRFTFLE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 +D+ + + S L+ +A+ + A V R+ G + + NI T LLE Sbjct: 61 LDLLTAD-LPSLLQNV--EAVYHLAGMPGV-RTSWGTEFAAYAAHNISATQRLLE----- 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +C + K RF+ ST VYG G SE + P SPY TK + ++L + Sbjct: 112 -ACKGRPLK---RFIYASTSSVYGE-RSGPLSETLEPAPLSPYGITKLTGEHLCRVYFRE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P+++ YGP P+ I +++ G + ++GDG RD+ Y+ D V Sbjct: 167 FAVPIVILRYFTVYGPRQRPDMSFHRFIRQLLAGQPLTVFGDGTQSRDFTYISDCVDGTI 226 Query: 235 LVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L++ G IGE NIGG ER +++ E+ LL+ L K +I++ G ++ Sbjct: 227 AALERDGVIGETINIGG-KERASVN---EVIRLLETLTGKQ----AIIQYTPAARGEPKQ 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K + +G+ P +E GL K + Sbjct: 279 TWADLTKAERLLGYKPVVTLEGGLQKEI 306 >gi|224538596|ref|ZP_03679135.1| hypothetical protein BACCELL_03490 [Bacteroides cellulosilyticus DSM 14838] gi|224519780|gb|EEF88885.1| hypothetical protein BACCELL_03490 [Bacteroides cellulosilyticus DSM 14838] Length = 350 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 161/361 (44%), Gaps = 54/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M+++VTG AGFIGS +C+ L++ D+ ++ + L N + Sbjct: 1 MKILVTGAAGFIGSYVCKRLLSRGDEVVGLDNINSYYDVNLKYGRLGTLGIDKNTVDWYK 60 Query: 46 ISQSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 QSN F F+++++ D++ +R D +VN AA++ V SI ++ +NI Sbjct: 61 FVQSNTSEQFRFVRINLEDKQAMRMLFANESFDKVVNLAAQAGVRYSIENPYAYVESNID 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATK 161 G +LE R + + S+ VYG K FSE D +P S Y+ATK Sbjct: 121 GFLNVLEGCRHYKVK---------HLVYASSSSVYGLNGKVPFSEKDSIAHPVSLYAATK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H YGIP YGP+ P+ L M+ G + ++ +G +R Sbjct: 172 KSNELMAHTYSHLYGIPSTGLRFFTVYGPWGRPDMSPFLFADAMLHGRPIKVFNNGDMLR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ Y++D + + V+ + YNIG ++ K +D + Sbjct: 232 DFTYIDDIIEGILRVIDHIPTSNQDWSAQNPDPSSSTAPYKIYNIGNSHPVKLMDFI--- 288 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I + H ++ +PG + D+S +++E+G+ P + ++ G+ +T+ W Sbjct: 289 -----QAIEGAIGHPAEKIYLPMQPGDVYQTNADTSALQNELGFKPDKPIKEGVQETIDW 343 Query: 324 Y 324 Y Sbjct: 344 Y 344 >gi|294505718|ref|YP_003569778.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294352124|gb|ADE72447.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 305 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 32/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGGAGFIGS L L+ +V +ID + S K+ + L + DIC Sbjct: 1 MKAIVTGGAGFIGSHLVEELIIK-GFEVHIIDSMI------SGKQENIHPLATLHVEDIC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + L+E +P+ + + AA++ V SI N+ GT +LE R S Sbjct: 54 SKQARQIILQE-KPNIVFHLAAQADVSTSINDPQYDADVNVKGTINILEACR----DASV 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 DK + ST VYG L K L +E P P S Y +K +++ + + YG+ Sbjct: 109 DK-----IIFASTSAVYGELQKDLITEMDPTAPISYYGLSKLTAESYIRLFSRLYGLSYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + N YGP P+ ++ + + R+ +G+ + ++GDG+ RD++YV+D V+A + Sbjct: 164 ILRYGNVYGPRQTPKGEGGVVAVFLDRLDKGTMLNIHGDGEQTRDFIYVKDIVQANIAAI 223 Query: 238 KKGRIGERYNIGGNNERKNID-IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 KG + +R +++ ++ E+ + + I + SHT E RPG + + Sbjct: 224 DKGH--QEIIHASTTQRTSVNRLLKELEKIHGSKI--NISHT------EGRPGDIKHSCL 273 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 DS K + W Q ++ +GL +T +L NN Sbjct: 274 DSKKAHKLLEWRSQVSIFNGLTETYT-FLKNN 304 >gi|57652476|ref|YP_185017.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus COL] gi|262049765|ref|ZP_06022630.1| hypothetical protein SAD30_1864 [Staphylococcus aureus D30] gi|262052062|ref|ZP_06024272.1| hypothetical protein SA930_0166 [Staphylococcus aureus 930918-3] gi|284023138|ref|ZP_06377536.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus 132] gi|57286662|gb|AAW38756.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus COL] gi|259160040|gb|EEW45074.1| hypothetical protein SA930_0166 [Staphylococcus aureus 930918-3] gi|259162155|gb|EEW46732.1| hypothetical protein SAD30_1864 [Staphylococcus aureus D30] gi|315196454|gb|EFU26804.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus CGS01] gi|329731779|gb|EGG68139.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus 21189] Length = 323 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 3 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + + + Sbjct: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 115 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 168 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 227 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K IG YNIG +++ IG L KS H F E R G + Sbjct: 228 IMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFKEARKGDIKHS 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 280 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 311 >gi|170078425|ref|YP_001735063.1| NAD-dependent epimerase/dehydratase family protein [Synechococcus sp. PCC 7002] gi|169886094|gb|ACA99807.1| NAD dependent epimerase/dehydratase family [Synechococcus sp. PCC 7002] Length = 315 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 32/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQV 57 ++IVTG AGFIGS+L L+ I V+ +D++ Y L +L ++Q F ++ Sbjct: 3 KVIVTGAAGFIGSSLAETLLQQ-GITVVGVDQVNDYYDITLKRKNLAALAQYQNFQLIEA 61 Query: 58 DI--CDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLW 114 DI D E + + + + AA++ V S +G ++ NI T ++LE + Sbjct: 62 DIQHLDWEDLLKGVS-----VVYHQAAQAGVRASWGIGFRDYTERNINSTQVMLEAAKKV 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF+ T VYG + E + P SPY TK +++ L + Sbjct: 117 GTLE--------RFVYAGTSSVYGDAETMPTPETICPQPVSPYGITKLAAERLCWLYLKN 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV YGP P+ I G + +YGDG+ RD+ Y+ D V+A Sbjct: 169 YAVPVTSLRYFTVYGPRQRPDMAFHKFFRAAILGETIGIYGDGKQTRDFTYISDAVQANL 228 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L ++ + IGE +NIGG + D++ EI ++ IP++Y DR D R Sbjct: 229 LAAQEPKAIGEIFNIGGGSRVILNDVLDEIDQIVGKPIPRNYG---------DRARGDAR 279 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + D +K K+ +G+ PQ + GL + W Sbjct: 280 HTSADVTKAKTILGYDPQVKLSEGLQREWDW 310 >gi|255010925|ref|ZP_05283051.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis 3_1_12] gi|313148731|ref|ZP_07810924.1| nucleoside-diphosphate-sugar epimerase [Bacteroides fragilis 3_1_12] gi|313137498|gb|EFR54858.1| nucleoside-diphosphate-sugar epimerase [Bacteroides fragilis 3_1_12] Length = 336 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 40/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAGNLNS------ 42 M+++VTG AGFIGS + L+ N L D+L G Sbjct: 1 MKVLVTGAAGFIGSYTVKALIAQGCEVVGLDIINSYYDVQLKYDRLADTGIAKDSIEDGI 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L S+ + F+++D+ DR+ + + D +VN AA++ V SI +I +N++ Sbjct: 61 LLPSSKYPSYRFIKIDLTDRDGLNHLFESEHFDVVVNLAAQAGVRYSIENPYAYIESNVV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATK 161 G LLE R + + S+ +YG DK ++E D P S Y+ATK Sbjct: 121 GFLNLLECCRHYPVN---------HLVYASSSSIYGLNDKVPYAETDKADTPVSLYAATK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ YGIP YGP+ P+ L + ++ G + ++ +GQ R Sbjct: 172 KSNELMAHAYSKLYGIPTTGVRFFTVYGPWGRPDMAPCLFMKAILNGDPIKVFNNGQMRR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D+ Y++D + L ++ YNIG + + +D + ++I K+ Sbjct: 232 DFTYIDDIIAGLMKIIAHPSADPIPFYIYNIGNSAPVELMDFI--------SVIEKTAGK 283 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 T + + + +PG D+S+++++ G+ P ++E G+ K WY+ Sbjct: 284 TAVKQMMGMQPGDVVCTYADTSRLENDFGYKPSTSIEEGIRKFYDWYI 331 >gi|68643794|emb|CAI33990.1| putative epimerase [Streptococcus pneumoniae] gi|68644310|emb|CAI34414.1| putative epimerase [Streptococcus pneumoniae] gi|89994614|emb|CAJ84827.1| putative epimerase [Streptococcus pneumoniae] Length = 360 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 37/357 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-------YAGNLNSLKEISQSNL--- 51 ++VTG AGFIG+ L L+ + +Q++ ID L L++++E QS+L Sbjct: 12 ILVTGAAGFIGANLVMSLLQEENPLQIIGIDNLNDYYDVSLKEYRLSTIQEECQSSLNKK 71 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ DI D + + + ++P +VN AA++ V SI D ++ +NIIG +LE+ Sbjct: 72 WVFIKGDIADSDLMEEIFETYRPQIVVNLAAQAGVRYSITNPDVYMKSNIIGFHTILEKC 131 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLA 170 R + + + S+ VYG K FSE D NP S Y+ TK +++ A Sbjct: 132 RKYQENIEH-------LVYASSSSVYGGNTKIPFSELDAVDNPVSLYAVTKKTNELEAHA 184 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++I+ + ++ G RD+ Y++D V Sbjct: 185 YSKLYNIPTTGLRFFTVYGPAGRPDMAYFSFTKQLIDKKPIEIFNYGNCQRDFTYIDDIV 244 Query: 231 RALYLVLK---KGRIGER---------YNIGGNNERKNIDIVFEI---GFLLDALIPKSY 275 + V+ + IGE YNI GN++ +N+ EI + +++P+ Y Sbjct: 245 EGVKRVMTGAPQKEIGEDGLPIPPYAIYNI-GNHQPENLLNFVEILQEKLIAASILPEDY 303 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + + + G D S ++ + + P+ ++ +GL WY N++ R Sbjct: 304 DFSSAQKLVPMQAGDVVATYADISLLEKDFNFKPKTSLRNGLRNFAEWY--RNFYQR 358 >gi|16080937|ref|NP_391765.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. 168] gi|221311855|ref|ZP_03593702.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. 168] gi|221316179|ref|ZP_03597984.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321091|ref|ZP_03602385.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325375|ref|ZP_03606669.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. SMY] gi|1730193|sp|P55180|GALE_BACSU RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1429254|emb|CAA67713.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. 168] gi|1783241|dbj|BAA11718.1| galE [Bacillus subtilis] gi|2636421|emb|CAB15912.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. subtilis str. 168] Length = 339 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 164/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ +L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKDL-TFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + S E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 + +K + + S+ VYG + +ED P ++PY TK + ++ HT Sbjct: 110 AMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDL-HTADNE 168 Query: 178 -PVLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 V L N +G P P L+P +A + + + ++G DG Sbjct: 169 WSVALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTG 228 Query: 220 VRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V E HV+AL VL + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RF + RPG D +K K E+GW + +E +C ++W W+ Sbjct: 285 -----YRFADRRPGDIATCFADPAKAKRELGWEAKRGLEE-----MCA---DSWRWQ 328 >gi|223938792|ref|ZP_03630680.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223892490|gb|EEF58963.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 321 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 24/330 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQ-SNLFSFL 55 M +VTGGAGFIGS +C L+ V +D L + A ++L+E++ F F+ Sbjct: 1 MNFLVTGGAGFIGSHVCERLLQSGH-SVWALDDLNPFYSPAVKESNLREVAALGKPFKFV 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ D + + KE Q D +++ AA + V S+ + F N+ GT +LE R Sbjct: 60 LGELSDARIVGNVFKEVQFDQVIHLAARAGVRPSLDEPEFFQQVNVEGTVNILEAAR--- 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHT 174 + + L S+ VYG K F+E P ++ SPY+A+K + + L + H Sbjct: 117 ------RHGVKKVLIASSSSVYGVNRKIPFAESDPVFSVISPYAASKLACEALGHVYHHV 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+ V + YGP P+ I + G + +YGDG RD+ Y+ D V + Sbjct: 171 YGMDVSMLRFFTVYGPRQRPDLAIHKFAKLITTGKPIPVYGDGSTARDYTYISDIVDGVV 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++ E +N+GG +E N+ + E+ + +S +I+ +PG Sbjct: 231 ACTERKFTYEIFNLGG-SETVNLSRLIEV-------LEQSLGKKAIIQRHPAQPGDVPLT 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K + + P+ +E G+ V W+ Sbjct: 283 YADITKSHQLLNYAPKVKIEQGIPLFVDWF 312 >gi|53713127|ref|YP_099119.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] gi|60681393|ref|YP_211537.1| putative LPS biosynthesis related UDP-glucuronic acid epimerase [Bacteroides fragilis NCTC 9343] gi|11023514|gb|AAG26471.1|AF285774_11 putative UDP-glucuronic acid epimerase [Bacteroides fragilis] gi|52215992|dbj|BAD48585.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] gi|60492827|emb|CAH07601.1| putative LPS biosynthesis related UDP-glucuronic acid epimerase [Bacteroides fragilis NCTC 9343] Length = 350 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 97/362 (26%), Positives = 165/362 (45%), Gaps = 56/362 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-------GNLNSLK--------- 44 M ++VTG AGFIGS +C+ L+ +V+ +D + G L+SL Sbjct: 1 MNVLVTGAAGFIGSHVCKRLLQRGD-EVVGLDNINSYYDINLKYGRLSSLGVPQSELSWY 59 Query: 45 EISQSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + ++SN+ FSF+++++ DR+ ++ D ++N AA++ V SI ++ +NI Sbjct: 60 KFTRSNVYPRFSFVRMNLEDRQAMQMLFANGNFDVVINLAAQAGVRYSIENPYAYVESNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 G +LE R SQ K + S+ VYG + FSE D +P S Y+AT Sbjct: 120 DGFLNVLEGCRH-----SQVK----HLVYASSSSVYGLNGQVPFSEKDGIAHPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + H Y IP YGP+ P+ L ++ G + ++ +G + Sbjct: 171 KKSNELMAHTYSHLYNIPSTGLRFFTVYGPWGRPDMSPFLFADAILHGRPIKVFNNGNML 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ Y++D V + V G + YNIG + K +D + Sbjct: 231 RDFTYIDDIVEGVLRVADSIPEGNQCWDAEVADPSMSCAPYKIYNIGNSRPVKLMDFIRA 290 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 I + K Y + +PG + D+S + EIG+ P ++E+G+ KT+ Sbjct: 291 IEMSIGREADKIY--------LPMQPGDVYQTYADTSSLSREIGFQPNTSLEAGVKKTIS 342 Query: 323 WY 324 WY Sbjct: 343 WY 344 >gi|86158377|ref|YP_465162.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774888|gb|ABC81725.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] Length = 310 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 139/326 (42%), Gaps = 27/326 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS + V + V V+D +L+S K + F VD+ Sbjct: 4 RILITGGAGFIGSTVADLFV-EAGWDVAVLD------DLSSGKRENVPRGARFYPVDVRS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + KE +P I + AA+ V RS+ N+ G L++ S Sbjct: 57 AAAAEAVRKE-RPQVICHHAAQIDVRRSMADPRLDADVNVGGLLNLMQAAAAAGSV---- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + S YG + E P P S Y A KA+S+ + + GIPV Sbjct: 112 ---EHVLFASSGGATYGDTEAVPTPETHPQAPVSHYGAAKAASELYLGVYRAALGIPVAA 168 Query: 182 SNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP P ++ + R++EG +YGDG RD+++V D RA L + Sbjct: 169 LRYANVYGPRQDPHGEAGVVAIFCGRLLEGRPCTVYGDGGQTRDYVFVGDVARANLLAAE 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G N+G E +++ ++ A + ++ RPG RR ID Sbjct: 229 RRHDGP-LNVGTGVE-TDVNALY-------AHLARAAGVDRPAEHAPARPGEQRRSCIDP 279 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 S IGW P+ + GL +T+ W+ Sbjct: 280 SLAGRAIGWRPEVPLADGLARTLEWF 305 >gi|67925345|ref|ZP_00518699.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] gi|67852810|gb|EAM48215.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] Length = 329 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 141/333 (42%), Gaps = 37/333 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG +GFIGS LC L+ DL QV +D L GN +L+ + FSFL D+ D Sbjct: 5 LVTGASGFIGSHLCDRLL-DLGYQVTGLDSLI-VGNPKNLESAKTNPQFSFLHQDVAD-- 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 L+ D I + A + + SI + + +N+ GTF LL R + Sbjct: 61 LTPQTLENI--DWIFHLAGLADLVPSIQNPENYYHSNVHGTFALLNACR---------QA 109 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + RF+ ++ YG D E P +P PY+ TK + LV+ W Y +P L Sbjct: 110 NIKRFVYTASSTCYGIPDTYPTPETYPCSPEHPYALTKYLGEQLVMHWAKVYKLPALSLR 169 Query: 184 CSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP + + + + + G + GDG+ RD+ +V D V A + Sbjct: 170 LFNVYGPRSRTTGAYGAVFGVFLKQKLAGKPFTVVGDGKQTRDFTFVSDVVEAFVKAGQS 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 E N+ + + +V +G I +I RPG D + Sbjct: 230 DVTNEIINVCSGQPQSVLRLVELLG--------------GEITYIPKRPGEPDCTWGDIT 275 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K K+ +GW PQ + +G V LD+ WR Sbjct: 276 KAKTLLGWEPQVSFANG----VAQMLDHIELWR 304 >gi|148241284|ref|YP_001226441.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307] gi|147849594|emb|CAK27088.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307] Length = 337 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 42/345 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVD 58 ++VTG AGFIG+A+C+ ++ D + ++ ID + ++ LK I N + F ++D Sbjct: 5 ILVTGAAGFIGAAVCKRILADGE-SIIGIDNINDYYDPGLKISRLKTIEHGN-WQFEKLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + +P +++ AA++ V SI +I +N++G +LE C Sbjct: 63 ISNQSSMKELFAKHKPCRVIHLAAQAGVRYSIENPSAYIQSNLVGFGNILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 D K + S+ VYG F E N P S Y+ATK S++ + + H YG+ Sbjct: 117 HHDVK---HLVYASSSSVYGGNTNLPFQESQAVNHPISLYAATKKSNELMAHTYSHLYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ L ++ G + ++ +G RD+ Y++D V + VL Sbjct: 174 PATGLRFFTVYGPWGRPDMAPMLFAKAILSGQPIRIFNNGLMQRDFTYIDDIVEGIVRVL 233 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +K +NIG +N I ++ I + DAL ++ E Sbjct: 234 RKPAAANPKFDKMKPDPATSWAPHRLFNIGNSNP---IPLMEFINCMEDALGIEAIKQFE 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +PG A D++ + +G+ P ++E G+ WY Sbjct: 291 PI-----QPGDVEATAADTAALHEWVGFKPSTSIEEGVKAFARWY 330 >gi|260893801|ref|YP_003239898.1| NAD-dependent epimerase/dehydratase [Ammonifex degensii KC4] gi|260865942|gb|ACX53048.1| NAD-dependent epimerase/dehydratase [Ammonifex degensii KC4] Length = 310 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 35/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIG+ + R L+ +V V+D NL + + F +D+ Sbjct: 1 MRVLVTGGAGFIGAHVVR-LLQRSGHEVAVVD------NLCTGRRERIPPGVPFYLLDLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +P+A+++ AA++ S++ N++GT LLE + Sbjct: 54 SSP-LEEPFRCERPEAVIHLAAQTVAPLSLVRPVADAEANVLGTIRLLE---------AS 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-PV 179 K R + S+ VYG E P P SPY A+K +++ + + YGI PV Sbjct: 104 VKAGVQRIVYTSSAAVYGDPLYLPVDEKHPICPLSPYGASKYAAEVYLFTYRRLYGIVPV 163 Query: 180 LL--SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +L +N ++ + +M+ G +YGDG+ RD++YVED A+ L Sbjct: 164 VLRLANVYGPGQGEEGEGGVVAIFCRKMVAGEPPEIYGDGEQTRDFVYVEDVAEAILAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G GE G E ++++++ I L + K + + RPG R A+ Sbjct: 224 TAG--GEEVLNIGTGEGVSVNLLWRI---LSRVGGKELAPI----YRSPRPGDIRHSALS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K + ++GW P+ ++E GL T W NWW + Sbjct: 275 PLKAQEKLGWSPRRSLEEGLKAT--W----NWWLK 303 >gi|125975127|ref|YP_001039037.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|256003217|ref|ZP_05428209.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281418452|ref|ZP_06249471.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|125715352|gb|ABN53844.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|255992908|gb|EEU02998.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281407536|gb|EFB37795.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|316939294|gb|ADU73328.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 326 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 141/334 (42%), Gaps = 29/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-------LKEISQSNLFSF 54 +++VTG GFIGS L LV Q + Y + NS KEI + Sbjct: 3 KILVTGADGFIGSHLTEELVK----QGYKVRAFVYYNSFNSWGWLDTFPKEIMKE--VEV 56 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DI D + A+K D + + AA + S + ++ TNI GT +L+ R+ Sbjct: 57 FAGDIRDSNGVLEAMKGI--DKVFHLAALVSIPFSYHSPEAYVDTNIKGTLNVLQAARIL 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D R ST EVYG+ E PY SPYSATK +D L ++ + Sbjct: 115 ---------DTSRVFITSTSEVYGTAQYVPIDEHHPYQGQSPYSATKIGADRLAESFYRS 165 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP+ + N YGP +IP IT+++ G G RD+ YV+D V Sbjct: 166 FNIPITIVRPFNTYGPRQSARAVIPTIITQLLSGKEEIRLGSLTPTRDFNYVKDTVNGFI 225 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + K + IGE NI E I I G L+ + PK+ + R ++ +R Sbjct: 226 EISKTDKTIGEEINIASQQE---ISIGKLAGELIRQINPKAKIVCDEQRIRPEKSEVNRL 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + K+K W +E GL +T+ + N Sbjct: 283 LG-SNEKLKKLTNWKQNYTLEQGLAETIEFIRHN 315 >gi|291521074|emb|CBK79367.1| Nucleoside-diphosphate-sugar epimerases [Coprococcus catus GD/7] Length = 364 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 170/352 (48%), Gaps = 37/352 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEISQS------NL 51 ++VTG +GFIG+ L L+ + I+++ ID + +++ LK+I ++ + Sbjct: 13 VLVTGSSGFIGANLVLELLRTQQSIKIIGIDNMNDYYDVSIKKYRLKQIEKAVAEHPESS 72 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ I D+ I + ++P +VN AA++ V SI D +I +N+IG + +LE Sbjct: 73 WKFIKGSIADKALINEIFETYKPSVVVNLAAQAGVRYSITNPDVYIESNLIGFYNILEAC 132 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + + + S+ VYGS K +S ED NP S Y+ATK S++ L A Sbjct: 133 RHSY---DNGQTGVEHLVYASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELLAHA 189 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + Y IP YGP P+ ++ ++++ G RD+ YV+D V Sbjct: 190 YSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLRNNETIYIFNYGNCKRDFTYVDDIV 249 Query: 231 RALYLVLK---KGRIGER---------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY- 275 + V++ + ++GE YNIG N+ ++ V + + ++P+ Y Sbjct: 250 EGIKRVMQATPEKKLGEDGLPIPPYAVYNIGNNHPENLLEFVDILQQELIRAKVLPEDYD 309 Query: 276 --SHTELIRF-IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 SH +L+ + D P YA D+S ++++ G+ P ++ GL K WY Sbjct: 310 FESHKKLVPMQLGDVP---VTYA-DTSALEADFGFKPSTSLREGLRKFAEWY 357 >gi|187935341|ref|YP_001885036.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723494|gb|ACD24715.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B str. Eklund 17B] Length = 334 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 29/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L++D +V+ +D L+ G L ++KE + + F F++ +I Sbjct: 1 MNMLVTGGAGFIGRWVIKRLLDDGH-KVVALDNLS-NGQLENIKEFNGRD-FKFIKGNIQ 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 + + KE + D I + AA +V SI + +GTF +LE+ ++ Sbjct: 58 NEADLDEVFKE-KYDIIYHLAASINVQDSIDDPRTTFFNDTVGTFNILEKAKIQMFGENG 116 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W S D + + +ST VY + E P P SPY +K +++ +V Sbjct: 117 KMDGDGWVLDSSDDTYPCKVVFMSTCMVYDVAEDKGIDESHPVKPVSPYGGSKIAAENMV 176 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I + G + +YG GQ RD LY Sbjct: 177 LSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFINNSLHGRDINIYGSGQQTRDLLY 236 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+D R + + ++ GE N G D+ L +I K ++ I Sbjct: 237 VKDCARFVVMTGYSQKVNGEIVNAGTGR-----DVTVN---ELAEIIVKDRVRVGHVKHI 288 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + +SSK K + W P+ +E G+ +T W Sbjct: 289 HPQS-EIMKLKCNSSKAKELMDWEPEYTLEQGIEETEQW 326 >gi|251778002|ref|ZP_04820922.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082317|gb|EES48207.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 329 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 23/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS LC L+ N ++ V + G L+SL + +S + F DI Sbjct: 4 KVLVTGADGFIGSHLCELLLENGYDVRAFVYYNSFNSWGWLDSLDKDKKSKIDIF-SGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R A+K D + + AA + S D ++ TNI GT +L+ +R Sbjct: 63 RDPNGVREAMKGI--DEVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R L ST EVYG+ E+ P+ SPYSATK +D + ++ ++ +P+ Sbjct: 114 --ELNTKRILITSTSEVYGTAKYVPIDENHPFQGQSPYSATKIGADRIAESFYRSFDLPL 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK- 238 + N YGP +IP IT+++ G G RD+ YV+D + K Sbjct: 172 TIVRPFNTYGPRQSARAVIPTIITQLLCGEKQIKLGLLTPTRDFNYVKDTANGFLEISKY 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IGE NI + E D+ EI + DA I E +R R Sbjct: 232 EKTIGEEINIATSKEISIKDLASEIISQINKDATI---ICDEERLR---PEKSEVNRLLG 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + KIK W P+ G+ +T+ W+ Sbjct: 286 SNEKIKKLTNWEPKFTFAEGIKETIDWF 313 >gi|87162155|ref|YP_492847.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193903|ref|YP_498689.1| hypothetical protein SAOUHSC_00088 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161508397|ref|YP_001574056.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253730481|ref|ZP_04864646.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733770|ref|ZP_04867935.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus TCH130] gi|258452275|ref|ZP_05700289.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A5948] gi|294849063|ref|ZP_06789807.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9754] gi|87128129|gb|ABD22643.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201461|gb|ABD29271.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|160367206|gb|ABX28177.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725774|gb|EES94503.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728237|gb|EES96966.1| UDP-glucose 4-epimerase [Staphylococcus aureus subsp. aureus TCH130] gi|257860112|gb|EEV82946.1| NAD-dependent epimerase/dehydratase [Staphylococcus aureus A5948] gi|294823955|gb|EFG40380.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9754] gi|320139549|gb|EFW31420.1| NAD-binding domain 4 [Staphylococcus aureus subsp. aureus MRSA131] gi|320142134|gb|EFW33953.1| NAD-binding domain 4 [Staphylococcus aureus subsp. aureus MRSA177] Length = 326 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 RVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + + + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIK 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 118 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 171 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 230 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K IG YNIG + E+ ++ L KS H F E R G + Sbjct: 231 IMEHKDAIGHGYNIGTGTFTN----LLEVYRIIGELYGKSVEH----EFKEARKGDIKHS 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 283 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|15669244|ref|NP_248049.1| capsular polysaccharide biosynthesis protein I [Methanocaldococcus jannaschii DSM 2661] gi|2842588|sp|Q58455|Y1055_METJA RecName: Full=Uncharacterized protein MJ1055 gi|1591707|gb|AAB99057.1| capsular polysaccharide biosynthesis protein I [Methanocaldococcus jannaschii DSM 2661] Length = 326 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 25/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 ++VTG AGFIG L +YL+++ + ++V+ ID L N LKE L ++F++ Sbjct: 6 ILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYN-PVLKEKRNEILKNYENYTFIK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D D + + LK+ + D IV+ A++ V S+ +I +N +GT + E R + Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRF-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 D + + S+ VYG K FSED + P S Y++TK S++ + + H Y Sbjct: 123 -------DIEKVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLY 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI ++ YG Y P+ ++ G + +Y G RD+ Y+ D V + Sbjct: 176 GIKMIGLRFFTVYGEYGRPDMAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILR 235 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +KK E +N+G + K + +++ I LI K + +F+ + G R Sbjct: 236 AIKKDFDYEIFNLGNS---KPVKLMYFI-----ELIEKYLNKKAKKKFLPMQDGDVLRTY 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D SK + +G+ P+ +E GL + W+L+N W Sbjct: 288 ADLSKSEKLLGYKPKVTIEEGLKRFCNWFLENKDW 322 >gi|262193621|ref|YP_003264830.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262076968|gb|ACY12937.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 321 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 29/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ D V+V+D T+ + S +S+ ++ D+ D Sbjct: 6 RILITGGAGFIGSHLCERLLTDN--DVVVLD--TFRRDALSSTGLSEHPRIRVVRGDVLD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A+ DA+++ A+ + VD + + ++GT LLE R + Sbjct: 62 AATVADAMAGC--DAVIHMASIAGVDTVMRNPVLTMRIAMLGTMNLLEAAR--------E 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-----PYSATKASSDYLVLAWGHTYG 176 + RF+ ST EV+G + D + Y+ K ++++L + + +G Sbjct: 112 SGEVKRFIDFSTSEVFGRYAYQVTEFDSTVLGAVGEARWTYAVAKLATEHLAMNYQKEFG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P N YGP E I I R + G + ++ DG +R W Y++D V A+ L Sbjct: 172 LPACSIRPFNIYGPRQVGEGAIHHFIRRALTGETLQVHNDGAQIRAWCYIDDIVDAILLA 231 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L++ + +G +NIG N R + I + L I + + I F P D Sbjct: 232 LEREQSVGHAFNIG--NPRSTVTI-----YQLARDIVRLSGSSSAIEF-HPWPHPDVEIR 283 Query: 296 IDS-SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + +K + +G+ Q ++E GL +T+ WY D+ Sbjct: 284 VPAVAKARELLGFEAQVDLEQGLKRTIAWYRDHG 317 >gi|187932783|ref|YP_001885731.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum B str. Eklund 17B] gi|187720936|gb|ACD22157.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum B str. Eklund 17B] Length = 329 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 25/329 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS LC L+ N ++ V + G L+SL + +S + F DI Sbjct: 4 KVLVTGADGFIGSHLCEILLENGYDVRAFVYYNSFNSWGWLDSLDKNKKSKIDIF-SGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R A+K D + + AA + S D ++ TNI GT +L+ +R Sbjct: 63 RDPNGVREAMKGI--DEVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLQASR------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R L ST EVYG+ E+ P+ SPYSATK +D + ++ ++ +P+ Sbjct: 114 --ELNTKRILITSTSEVYGTAKYVPIDENHPFQGQSPYSATKIGADRIAESFYRSFDLPL 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP IT+++ G G RD+ YV+D + K Sbjct: 172 TIVRPFNTYGPRQSARAVIPTIITQLLCGEKQIKLGSLTPTRDFNYVKDTANGFLEISKS 231 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDR--RYA 295 + IGE NI + E I L +I + +I E RP R Sbjct: 232 EKTIGEEINIATSKE-------ISIKNLASEIISQINKDATIICDEERLRPEKSEVNRLL 284 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K+K W P+ G+ +T+ W+ Sbjct: 285 GSNEKVKKLTNWEPKFTFAEGIKETIDWF 313 >gi|319789066|ref|YP_004150699.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans HB-1] gi|317113568|gb|ADU96058.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans HB-1] Length = 324 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 50/350 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +++TG AGFIG + L+ +V+ +D L Y L L + ++ F F ++D Sbjct: 4 VLLTGAAGFIGYRTAKLLLEK-GYKVIGVDNLNNYYDPKLKEYRLNLLKENRNFKFYRLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E ++ +E + I+N AA + V SI + TTN +GT LLE + + Sbjct: 63 IENFEALKVVFEENSFEGIINLAARAGVRYSIENPFVYETTNSLGTLNLLELMKEFGLK- 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 +F+ ST +Y F ED+P N P SPY+A+K +++ + + + YG Sbjct: 122 --------KFVLASTSSLYAG-QPMPFKEDLPVNTPISPYAASKKAAEVMSYTYHYLYGF 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V + YGP P+ I I + EG V +YGDG RD+ YV+D Sbjct: 173 DVTVVRYFTVYGPAGRPDMSIFRFIKWIDEGRPVEVYGDGTQSRDFTYVDDIAEGTIRAY 232 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----------R 287 + + N+GGN + + E+IR IE+ + Sbjct: 233 ETETGYQIINLGGN---------------------RPHQLKEVIRLIEEYLGKKAEIIYK 271 Query: 288 PGHD---RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 P H + D +K + +GW P+ +E GL +TV W+ +N + R + Sbjct: 272 PFHKADLKATWADITKAREILGWEPKVPLEEGLRRTVEWHKENRDFLREI 321 >gi|38234000|ref|NP_939767.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae NCTC 13129] gi|38605712|sp|P33119|GALE_CORDI RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|38200262|emb|CAE49946.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae] Length = 328 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 54/332 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V ++D LT GN +++ + +F++ DI Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLEQGHEVTIVDNLT-TGNRDAVPLGA-----TFVEGDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + L DA+++FAA S V S+ DE+ N++ T LL+ Sbjct: 53 -KDVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAM--------- 102 Query: 121 DKKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ R + S T YG + +ED P +P++PY ATK S DY + ++ H YG Sbjct: 103 -KRNNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAA 161 Query: 180 LLSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 N G Y LIPL + + +F++G DG +RD+++ Sbjct: 162 TSLRYFNVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEI-GFLLDA-LIPKSYSHT 278 + D A L L+ G +N+G G + ++ ID E+ G L+ A + P+ Sbjct: 222 IRDLADAHILALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPR----- 276 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S+K +SE+GW PQ Sbjct: 277 --------RAGDPAVLIASSAKAQSELGWKPQ 300 >gi|319785041|ref|YP_004144517.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170929|gb|ADV14467.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 334 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 24/329 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV++ + L + + G L+ L + + L ++ D+ Sbjct: 7 KVLVTGADGFIGSHLTEALVHEGADVTALALYNSFDSHGWLDDLPDHVRGQL-QCIRGDV 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I ++ A+ + AA + S A ++ TN++GT +LE R W Sbjct: 66 RDSAFINRIVR--GQAAVFHLAALIAIPYSYAAAQSYVETNVLGTVNVLEAARHW----- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ E P SPYSA+K +D + ++ ++ +PV Sbjct: 119 ----ETERIVHTSTSEVYGTALTMPIDESHPLQGQSPYSASKIGADMMAASYARSFDVPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVED-HVRALYLVL 237 ++ N YGP ++P I + + E + GD +RD +VED + Sbjct: 175 VILRPFNTYGPRQSERAIVPTIIRQALDENCPAIMVGDTSPIRDLTFVEDTAAAFVAAGA 234 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI- 296 + G YN G D++ + L P + + RP + A+ Sbjct: 235 AELEFGHAYNAGSQRAVSVSDVLELVLELSGTRKPVRRDESRM------RPQNSEVRALL 288 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWY 324 DSS ++S++GW ++ GL KT+ W+ Sbjct: 289 ADSSNLESKVGWRAHTSLRDGLEKTIEWW 317 >gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 328 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/340 (27%), Positives = 149/340 (43%), Gaps = 30/340 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----F 52 MR+++TGGAGFIGS L L +D+ I D + A + E + + Sbjct: 1 MRILITGGAGFIGSHLAERLFLCGHDIIIVDNFNDFYSPAVKRRNFTETAGNAAACGRRL 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + DI D E IR+ + PDA+++ AA + V SI + N+ GT LLE + Sbjct: 61 LLCEGDIRDEEFIRAIFTQELPDAVIHLAAAAGVRPSIDNPLLYEEVNVRGTMNLLEAAK 120 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAW 171 L FL S+ VYG+ K F+E P NP SPY+ATK + + + + Sbjct: 121 AIGVRL---------FLFASSSSVYGNNPKVPFAEADPVDNPISPYAATKKAGELICHTY 171 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y I + YGP P+ I + + +G + YGDG RD+ Y+ D V Sbjct: 172 HHLYDINIACLRFFTVYGPRQRPDLAISKFVRLIEQGKPIPFYGDGSTSRDYTYIGDIVA 231 Query: 232 ALYLVLKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + L+ GE+ +N+GG++ +V +I ++ + + Sbjct: 232 GIEKALQWVNTGEKRYDIFNLGGSSPVALNRLV--------KIIEHQLGKKAVLECLPMQ 283 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G R + K S +G+ P +E G+ V WY D+ Sbjct: 284 AGDVERTFANIEKSSSVLGYKPVTPIEEGIANFVRWYQDS 323 >gi|169343017|ref|ZP_02864045.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Clostridium perfringens C str. JGS1495] gi|169298926|gb|EDS81000.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Clostridium perfringens C str. JGS1495] Length = 361 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 29/349 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEIS------QSN 50 ++ +TG GFIGS L L+ I ++ ID + ++N LKEI +++ Sbjct: 10 KIFITGAIGFIGSNLVLELLKTQNAIHIIGIDNMNDYYDVNIKDWRLKEIEKEVEKHENS 69 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 + F++ I D+E + +++PD +VN AA++ V SI+ D + +N++G + LLE Sbjct: 70 TWIFIKGSISDKELVDDIFNKYKPDIVVNLAAQAGVRYSIINPDSYFESNLLGFYNLLEA 129 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + +K + S+ VYG+ K +S +D NP S Y+ATK S++ + Sbjct: 130 CRHSY---DNGEKGVDHLVYASSSSVYGANKKVPYSTDDKVDNPVSLYAATKKSNELMAH 186 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ Y IP YGP P+ ++++G + ++ G RD+ Y++D Sbjct: 187 AYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGETIEIFNYGNCKRDFTYIDDI 246 Query: 230 VRALYLVLK------KGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY 275 V + V++ G G YNIG +N +D V + + ++ + Y Sbjct: 247 VEGVKRVMQAPPEKNNGEDGLPIPPYAVYNIGNSNPENLLDFVTILQEELIRAGVLSEDY 306 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + G D+ ++ + G+ P ++ +GL K WY Sbjct: 307 DFEAHKKLVPMQQGDVPVTYADTRPLEKDFGFKPSTDLRTGLRKFAEWY 355 >gi|312877249|ref|ZP_07737217.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] gi|311795963|gb|EFR12324.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] Length = 305 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 34/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V ++D L +GN+ ++ ++ F Q+DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-ERGYDVCIVDNLL-SGNVCNINPKAK-----FYQLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + +E + + ++ AA+ V +S+ A + N++GT LL+ C Sbjct: 53 -RDNLEKVFEENKIEYCIHQAAQVSVAKSMEDAYLDCSINVLGTVNLLD------YCAKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG + E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYI 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + CSN YGP P ++ + RM +V ++GDG RD++YVED A + L Sbjct: 163 IFRCSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEANCVAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KN+ + +FEI L L Y + + + RPG Sbjct: 223 ETSVSG-TFNL---STGKNVSVNELFEI---LSGL--TGYKKSPVYQ--PKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +KS +G+ PQ ++ GL KTV +++D Sbjct: 272 LSNNLLKSVLGFSPQFSLLEGLKKTVEYFID 302 >gi|56419374|ref|YP_146692.1| NDP-sugar epimerase [Geobacillus kaustophilus HTA426] gi|56379216|dbj|BAD75124.1| NDP-sugar epimerase [Geobacillus kaustophilus HTA426] Length = 318 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 29/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL---TYAG-NLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS LC L+ + + V+ +D T A ++ + F+FL+ Sbjct: 1 MNILVTGAAGFIGSHLCEKLLENDEHHVIGVDGFLGPTPAPLKAKNIAHLQSHPRFTFLE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 +D+ + + S L+ +A+ + A V R+ G + + NI T LLE Sbjct: 61 LDLLTAD-LPSLLQNV--EAVYHLAGMPGV-RTSWGTEFAAYAAHNISTTQRLLE----- 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +C + K RF+ ST VYG G SE + P SPY TK + ++L + Sbjct: 112 -ACKDRPLK---RFIYASTSSVYGE-RSGPLSETLEPAPLSPYGITKLTGEHLCRVYFRE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P+++ YGP P+ I +++ G + ++GDG RD+ Y+ D V Sbjct: 167 FAVPIVILRYFTVYGPRQRPDMSFHRFIRQLLAGQPLTVFGDGTQSRDFTYISDCVDGTI 226 Query: 235 LVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L++ G IGE NIGG ER +++ E+ LL+ L K +I++ G ++ Sbjct: 227 AALERDGVIGETINIGG-KERASVN---EVIRLLETLTGKQ----AIIQYTPSARGEPKQ 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K + +G+ P +E GL K + Sbjct: 279 TWADLAKAERLLGYKPVVTLEGGLQKEI 306 >gi|331268903|ref|YP_004395395.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum BKT015925] gi|329125453|gb|AEB75398.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum BKT015925] Length = 349 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 37/345 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVDI 59 +VTG AGFIG L + L+ + +V+ ID + Y NL L E+ F F++ I Sbjct: 13 LVTGAAGFIGFYLSKKLL-EKGCRVIGIDNINDYYDVNLKYTRLHELEAFEKFIFIKGSI 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ I K +P+ +VN AA++ V SI D +I +NI+G F +LE R Sbjct: 72 SDKSMIMDTFKNCKPNIVVNLAAQAGVRYSIENPDVYIESNIVGFFNILEACRY------ 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + S+ VYGS K F E D NP S Y+ATK S++ + + H Y IP Sbjct: 126 ---NNVEHLVYASSSSVYGSNKKVPFEECDFVDNPVSLYAATKKSNELMAHTYSHLYNIP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN----VRDWLYVEDHVRALY 234 YGP P+ + +G + ++ +G RD+ Y++D V + Sbjct: 183 ATGLRFFTVYGPMGRPDMAYFGFANKYFKGEPIKIFNNGDFEHDLYRDFTYIDDIVEGIQ 242 Query: 235 LVLKK--GRIGER----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 +L R+ E +NIG NN K + + L+ + KS + + Sbjct: 243 RLLSNPPSRLSENSVQEIAAHRVFNIGNNNPEKLMTFITT----LEKCLSKSLDRKIIFK 298 Query: 283 FIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 I + + G + K++ IG+ P ++E GL K WY+ Sbjct: 299 KIFEPLKAGDVPATYASTDKLQEYIGFKPSTSIEEGLQKFAEWYV 343 >gi|156933709|ref|YP_001437626.1| hypothetical protein ESA_01535 [Cronobacter sakazakii ATCC BAA-894] gi|156531963|gb|ABU76789.1| hypothetical protein ESA_01535 [Cronobacter sakazakii ATCC BAA-894] Length = 337 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ QV+ ID L Y NL L + Q F F + Sbjct: 1 MKFLVTGAAGFIGFHVSERLLA-AGHQVIGIDNLNDYYDVNLKLARLNLLKQHTAFYFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + + QP +++ AA++ V S+ + N+ G +LE R Sbjct: 60 IDLADRQAMETLFAQHQPQRVIHLAAQAGVRYSLENPHAYADANLTGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKVEHL--LYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + +++GS + +Y GQ RD+ Y++D A+ Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFKFTQAIVKGSSIDVYNHGQMRRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG ++ +D + + + K+ Sbjct: 231 LQDVIPQADPQWTVENGSPATSSAPYRVYNIGNSSPVALMDYI--------SALEKALGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D+S + IG+ PQ ++E G+ + V WY Sbjct: 283 EAQKNMLPMQPGDVLETSADTSALYEVIGFKPQTSVEEGVKRFVTWY 329 >gi|94969865|ref|YP_591913.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] gi|94551915|gb|ABF41839.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] Length = 324 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/330 (23%), Positives = 151/330 (45%), Gaps = 29/330 (8%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTG G +G L R+L+ + LV D + + + + +Q D+ Sbjct: 11 VLVTGATGLLGGWLTRHLLEQGASVTALVRDSVPQS----EFERCLMRQRVNVVQGDLSK 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + L E++ + + + AA++ V + +NI GT+ LLE R Sbjct: 67 PQLLERVLGEYEVETVFHLAAQTIVGIANRNPVSTFESNIRGTWNLLEACR--------R 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + S+D+ YG ++EDMP PY +K+ +D + ++ HT+ +PV + Sbjct: 119 SPNVSAIVLASSDKAYGDQTVLPYTEDMPLQGRHPYDVSKSCADLIAQSYAHTFRVPVAI 178 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV---- 236 + C N YG +++P I + G + DG+ VRD+ Y+ED A L+ Sbjct: 179 TRCGNFYGGGDLNWNRVVPGTIRSVFRGERPIIRSDGKFVRDYFYIEDGAAAYMLLAERL 238 Query: 237 -LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + K IG +N + +D+V + ++ K S+ L I+++ ++ R+ Sbjct: 239 TVDKKLIGSAFNFSNEAQINVLDLV-------NTILQKMNSN--LKPEIQNQANNEIRHQ 289 Query: 296 -IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + + ++ W Q ++ GL +T+ WY Sbjct: 290 FLSAERARKQLNWRAQYTLDEGLERTIAWY 319 >gi|284929761|ref|YP_003422283.1| nucleoside-diphosphate-sugar epimerase [cyanobacterium UCYN-A] gi|284810205|gb|ADB95902.1| nucleoside-diphosphate-sugar epimerase [cyanobacterium UCYN-A] Length = 329 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 47/346 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS----------QSNL 51 +++VTG AGFIG L +YL+ + ++ ID NLNS EIS Sbjct: 3 KILVTGAAGFIGFHLSQYLLKNNN-TIIGID------NLNSYYEISLKKARLDQLKTEKK 55 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F VDI D++ I E Q D +++ AA++ V SI ++ +N+ G +LE Sbjct: 56 FTFCLVDIADQKHISQIFTEHQFDYVIHLAAQAGVRYSIENPYTYVDSNLTGFINILE-- 113 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C + K + S+ VYG+ K FS D +P S Y+ATK +++ + Sbjct: 114 ----GCRHGNIK---HLVYASSSSVYGANKKIPFSISDNVDHPLSLYAATKKANELMAYT 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y IP YGP+ P+ L ++ G + ++ G RD+ Y+ED V Sbjct: 167 YSHLYNIPTTGLRFFTVYGPWGRPDMAYFLFTKSILSGQPINVFNQGNMKRDFTYIEDIV 226 Query: 231 RALYLVLKKGRIGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + V+ + + + YNIG N K +++ + I L + L K+ + Sbjct: 227 EGIAKVIDRIPMSSKTNGLESQVPHKLYNIGNN---KPVNLEYFIEVLEECLGCKAVKN- 282 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ +PG D ++ +IG+ P ++ GL K V WY Sbjct: 283 ----YLPMQPGDVPITYADIDDLEKDIGFKPNTDLRVGLEKFVSWY 324 >gi|253701147|ref|YP_003022336.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21] gi|251775997|gb|ACT18578.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21] Length = 685 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 105/355 (29%), Positives = 156/355 (43%), Gaps = 51/355 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ L ++LV + +V++ D L+ AG +L + N LQV I D Sbjct: 327 VLVTGGAGFIGTNLVQHLVAQGE-RVILYDNLSRAGVEKNLLWL-MDNCGERLQVVIGDT 384 Query: 63 E---CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + A+ E + + +FAA+ V SI + N GTF LLE R Sbjct: 385 RNSLLLEQAVSEAK--QVFHFAAQVAVTTSIDNPGNDFSVNAQGTFSLLEAIR------- 435 Query: 120 QDKKDQFRFLQISTDEVYGS---------------LDKGLFS----EDMPYNPSSPYSAT 160 K L ST++VYG+ LD L S E+ P + SPY + Sbjct: 436 -KAKTPPSLLYTSTNKVYGAIEGCGVRKNGVRYEPLDPQLRSHGLGEETPLDFLSPYGCS 494 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGD 216 K +D VL + ++GI + S YGP+ + + + AI M +G + LYGD Sbjct: 495 KGCADQYVLDYARSFGIAAAVFRMSCIYGPHQYGTEDQGWVAHFAIQTM-KGEPITLYGD 553 Query: 217 GQNVRDWLYVEDHVRALYLV--LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G +RD L+VED V A+ + G+ +NIGG R + L Sbjct: 554 GCQIRDLLFVEDLVDAMCRARDIMPRIAGQAFNIGGGPARTISLLE--------LLDLLR 605 Query: 275 YSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 H L + D R G R Y D+ K GW P+ ++ G+ + W L+ Sbjct: 606 ELHGGLPTILRDDWRTGDQRYYVSDTRKFCKATGWTPRHSVAEGVRRLYDWLLET 660 >gi|237737810|ref|ZP_04568291.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium mortiferum ATCC 9817] gi|229419690|gb|EEO34737.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium mortiferum ATCC 9817] Length = 349 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 65/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVND-----------------LKI-----------QVLVID 32 M ++VTGG GFIGS LC L+ + +KI Q + + Sbjct: 1 MNIVVTGGVGFIGSHLCETLLKEGHKVICIDNFDEFYQLNIKIRNLFESTGNKKQFKIFE 60 Query: 33 KLTYAGNL------NSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 K + NL NS+KE +++ + +DI D+E I +E +PD ++N A + V Sbjct: 61 KEILSKNLSKNEIINSIKEFIKNDNYKLYFMDIRDKE-IEKIFREEKPDIVINLAGLAGV 119 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS 146 S+L E+ + N+ G LLE + C +F+Q S+ VYG+ F Sbjct: 120 RPSLLNPLEYESVNVQGFINLLENCK---RCGIN------KFIQASSSSVYGNNKIVPFK 170 Query: 147 E-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM 205 E D+ SPY+ATK S + + + Y I ++ YG P+ I + + Sbjct: 171 ENDVVDFAISPYAATKKSCEVMGHVFHSLYNIDMIHLRFFTVYGERQRPDLAISKFVKNI 230 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG- 264 IEG + +YG+G RD+ YV D ++ G + +I N N+ + +G Sbjct: 231 IEGKEITMYGEGDTYRDYTYVADIIQ-----------GIKKSINYINSNTNVYEILNLGN 279 Query: 265 ---FLLDALIPKSYSHTELIRFIEDRPGH----DRRYAIDSSKIKSEIGWFPQENMESGL 317 L +I EL I+ P DR +A D +K K+ IG+ P+ E G+ Sbjct: 280 GNTIALKKMISVLEKKLELEAKIKKLPKQLGDVDRTFA-DITKAKNMIGYSPETTFEKGI 338 Query: 318 NKTVCWY 324 + + WY Sbjct: 339 ERFIKWY 345 >gi|167753448|ref|ZP_02425575.1| hypothetical protein ALIPUT_01722 [Alistipes putredinis DSM 17216] gi|167658073|gb|EDS02203.1| hypothetical protein ALIPUT_01722 [Alistipes putredinis DSM 17216] Length = 344 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID-------------KLTYAG---NLNSLK 44 M+++VTG AGFIG L + L+ + QV+ ID +L AG NL + Sbjct: 1 MKILVTGSAGFIGYHLSKRLL-EAGNQVVGIDSINDYYDVRLKYARLETAGIHRNLVAKG 59 Query: 45 EISQSN---LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + QS+ + F+Q+ + DR+ +++ + DA+VN AA++ V SI +I +NI Sbjct: 60 QPVQSDRYPAYRFIQMHLEDRQALQNLFGTEKFDAVVNLAAQAGVRYSIENPYAYIDSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 +G LLE C+ + F + S+ VYG K FSE D NP S Y+AT Sbjct: 120 VGFLNLLE-------CVRHNPVRHFVY--ASSSSVYGGNTKTPFSEEDRVDNPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + YGIP YGP+ P+ L + EG + ++ G Sbjct: 171 KKSNELMAHVYSGLYGIPTTGLRFFTVYGPWGRPDMAPMLFAGAIREGRPIKVFNHGNLS 230 Query: 221 RDWLYVEDHVRALYLVLKKGRI--------GERYNIGGNNERKNIDIVFEIGFLLDALIP 272 RD+ Y++D + + V+ K E YNIG + + +D + + Sbjct: 231 RDFTYIDDIIEGMVRVIGKAPAPTQDRPIPAEVYNIGCGHPVQLMDFIHT--------LE 282 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ ++ + + G D++K++ + G+ PQ ++ G+ WY Sbjct: 283 QALGKNAQLQMMPMQQGDVHTTYADTTKLERDFGYRPQVSLAEGIAIFAQWY 334 >gi|323703553|ref|ZP_08115198.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323531456|gb|EGB21350.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 34/333 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTG G IGS L LV + V ++ NL I+Q + ++ DI D Sbjct: 9 VLVTGCTGMIGSWLTSRLVQEGAQVVGIVRDHVACSNLF----INQLDKHIYIAYGDITD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E++ D + + A+++ V +RS L E +NI GT+ +LE RL Sbjct: 65 FNFITRVMAEYEVDTVFHLASQTIVTIANRSPLSTFE---SNIKGTWNILEACRL----- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + S+D+ YG D+ + E+ P PY +K+ +D + ++ +TYG+P Sbjct: 117 ---SPTVERVVVASSDKAYGPQDQLPYLEEYPLRGRHPYDVSKSCADLIAQSYFYTYGLP 173 Query: 179 VLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V +S N YG ++IP I ++E + + DG +R+++YV+D V A YL L Sbjct: 174 VAISRLVNVYGGGDLNFNRIIPGTIKSVLENRNPIIRTDGSPLREYIYVQDAVTA-YLTL 232 Query: 238 -----KKGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELIRFIEDRPGHD 291 ++ +G+ +N G + ++IV EI + L+P IR G Sbjct: 233 AQNLHRREVMGQAFNFGPHCPVSVLEIVQEIIKVSGRKLMPD-------IRGKGSSAGEI 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + DS+K + +GW P N+ GL +T+ WY Sbjct: 286 KYQYSDSTKAREILGWRPNWNLNQGLLETMAWY 318 >gi|293370203|ref|ZP_06616763.1| NAD-binding protein [Bacteroides ovatus SD CMC 3f] gi|292634700|gb|EFF53229.1| NAD-binding protein [Bacteroides ovatus SD CMC 3f] Length = 354 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 38/348 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLN----SLKEI-SQSNLFSFLQ 56 ++VTG AGFIGS L L +D + I+V+ ID +T ++N LKEI S + F++ Sbjct: 13 VLVTGAAGFIGSNLVMRLFHDFRNIRVIGIDSITDYYDVNIKYERLKEIESLDRDWIFVR 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 I D++ + E + +VN AA++ V SI D ++ +N+IG + +LE R + Sbjct: 73 ASIADKDAVERIFSENKISVVVNLAAQAGVRYSITNPDAYVQSNLIGFYNILEACRHY-- 130 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYGS K +S +D NP S Y+ATK S++ + A+ Y Sbjct: 131 -------EVEHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLY 183 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ ++++G + ++ G RD+ YV+D V + Sbjct: 184 NIPSTGLRFFTVYGPAGRPDMAYFGFTDKLVKGETIKIFNYGNCKRDFTYVDDIVEGVVR 243 Query: 236 VLKKGRIGER------------YNIGGNNERKNIDIV--FEIGFLLDALIPKSY---SHT 278 V++ E YNIG ++ ++ V + + ++ K Y SH Sbjct: 244 VMQHAPEKENGEDGLPIPPYKVYNIGNSHPENLLEFVTILQEELVRAGVLSKDYDFESHK 303 Query: 279 ELIRFIE-DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 EL+ + D P YA D++ ++ + + P ++ GL WY+ Sbjct: 304 ELVPMQQGDVP---VTYA-DTTSLEQDFAFKPGTSLRDGLRNFAEWYV 347 >gi|325680459|ref|ZP_08160008.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus albus 8] gi|324107828|gb|EGC02095.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus albus 8] Length = 355 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 40/350 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLT--YAGNLNSL------KEISQSNL-F 52 ++VTG GFIG+ L L+ ++ V+ +D + Y L S K +SN+ Sbjct: 13 ILVTGSPGFIGANLVLRLLGEMTSGTVISLDNMNDYYDPALKSYRLELIEKAAEKSNVRH 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F++ I D+ + S E++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 VFVKGSIADKALVDSIFAEYKPSVVVNLAAQAGVRYSIDHPDVYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + + S+ VYG K FS +D NP S Y+ATK S++ L ++ Sbjct: 133 HYPVE---------HLVYASSSSVYGGNKKVPFSVDDKVDNPVSLYAATKKSNELLAHSY 183 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ A ++++G ++ ++ G RD+ Y++D V Sbjct: 184 SKLYNIPSTGLRFFTVYGPAGRPDMFYFSATNKLVKGENIKIFNYGNCKRDFTYIDDIVE 243 Query: 232 ALYLVLK------KGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY-- 275 +Y V++ G G YNIGG +D + + + ++P++Y Sbjct: 244 GVYRVMQGAPEKANGEDGLPLPPYAVYNIGGGTPENLLDYISTLQEELVRAKVLPENYDF 303 Query: 276 -SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +H EL+ + G DS+ ++ + G+ P+ + GL WY Sbjct: 304 EAHRELVGM---QAGDVPVTYADSTALEKDYGFTPKIGIREGLRNFTEWY 350 >gi|158522335|ref|YP_001530205.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] gi|158511161|gb|ABW68128.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] Length = 335 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 154/354 (43%), Gaps = 51/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV--IDKLTYAGNLNS-LKEISQSNLFSFLQV 57 M ++VTG AGFIG L + L D V V I+ G N+ L + + FSF Q+ Sbjct: 1 MNILVTGAAGFIGFHLAKRLCEDGHTVVGVDNINDYYDPGLKNARLALLHPFSNFSFFQI 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + D +V+ AA++ V S+ + +I +N++G +LE C Sbjct: 61 DIADRPFMAKLFTSHKFDCVVHLAAQAGVRYSLEHPETYIDSNLVGFGNILE------GC 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLA 170 K + S+ VYG + MP+ +P S Y+ATK +++ + Sbjct: 115 RHAKVK---HLVYASSSSVYG------LNTTMPFSVFHNVDHPVSLYAATKKANELMAHT 165 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+P YGP+ P+ L ++EG+ + +Y G RD+ Y++D V Sbjct: 166 YSHLYGLPATGLRFFTVYGPWGRPDMAYFLFTRAILEGTPIKVYNQGNMKRDFTYIDDIV 225 Query: 231 RALYLVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIP 272 + V+ + R R YNIG N V +GF+ I Sbjct: 226 EGVVRVMDRVPAPDPEWSPEAPCPATSRAPYRLYNIGNNQP------VSLMGFI--EAIE 277 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ F+ +PG D ++ G+ P ++E+G+ K V WYLD Sbjct: 278 KALGKKAEKTFLPMQPGDVPATWADIDSLRQATGFSPATSLENGIAKFVAWYLD 331 >gi|296108815|ref|YP_003615764.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] gi|295433629|gb|ADG12800.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] Length = 299 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 39/325 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ D +VLVID LT GNL +L ++ FL+ DI Sbjct: 2 ILVTGGAGFIGSHVVDKLI-DQGYEVLVIDNLT-TGNLKNLNPKAK-----FLKHDI--- 51 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 R AL +AI++ AA+ +V S+ N++GT LLE R Sbjct: 52 ---REALDIKDVEAIIHHAAQINVRHSVEKPRYDADVNVLGTINLLELAR---------- 98 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K +F+ S+ VYG+ E+ +P SPY +K + + + + YG+ + Sbjct: 99 KADAKFIYASSMAVYGNPKYLPVDENHEIDPISPYGLSKYCGELYIKLYNNLYGLEYSIL 158 Query: 183 NCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 SN YG P+ +I + I++++ G ++G+G+ RD++YV D +A + L Sbjct: 159 RYSNVYGERQNPKGEAGVISIFISKILSGERPVIFGNGEQTRDFVYVGDVAKANVMALN- 217 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGF-LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 NE NI EI L +I + ++ E + + R G R +D Sbjct: 218 ----------WKNEVVNIGTGTEITINKLYKIIKEKMNYNEEPIYDKPRKGDVYRVYLDI 267 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 ++ K ++GW P+ ++ GL++ + W Sbjct: 268 TRAK-KLGWEPEVSLNEGLDRVISW 291 >gi|146280099|ref|YP_001170256.1| hypothetical protein Rsph17025_4099 [Rhodobacter sphaeroides ATCC 17025] gi|145558340|gb|ABP72951.1| hypothetical protein Rsph17025_4099 [Rhodobacter sphaeroides ATCC 17025] Length = 334 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 39/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R++VTG AGFIG L R L+ + +V D +T Y L + + Q FS + Sbjct: 3 RILVTGTAGFIGFHLARLLLAE-GFRVHGYDGMTDYYDVALKRRRHAMLLQDPNFSATEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ EF P+ IV+ AA++ V S+ ++ N+IGTF ++E R Sbjct: 62 LLEDQALFDRVADEFAPEVIVHLAAQAGVRYSVENPRAYLDANVIGTFSVMEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + ST VYG+ ++ F E D + + Y+ATK +++ + AW H +G Sbjct: 117 ----RLKVAHLMMASTSSVYGANEEMPFRETDKADHQLTIYAATKKANESMGHAWAHVHG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV + YGP+ P+ + + +++G + +Y G+ RD+ YV+D VRA+ L+ Sbjct: 173 VPVTMFRFFTVYGPWGRPDLALFKFVDAILDGRPIDIYNHGEMWRDFTYVDDLVRAIRLL 232 Query: 237 LKKGRIGER----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ G NIG +++ + +D V I L ++Y +L Sbjct: 233 IEAVPGGPETAVEEDSLSPAAPFRIVNIGNSDKVRLLDFVEAIEESLGRRAIRNYMPMQL 292 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D P D+ + G+ PQ ++ G+ + V WY D Sbjct: 293 ----GDVPA----TWADAGLLHRLTGYRPQTDVRDGIARFVAWYRD 330 >gi|325107114|ref|YP_004268182.1| UDP-glucuronate 5'-epimerase [Planctomyces brasiliensis DSM 5305] gi|324967382|gb|ADY58160.1| UDP-glucuronate 5'-epimerase [Planctomyces brasiliensis DSM 5305] Length = 336 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 41/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQV 57 + +VTG AGFIG L + L+ D QV+ ID L A L ++ + + FSF ++ Sbjct: 3 KYLVTGAAGFIGFHLSQKLM-DRGDQVIGIDNLNDYYEVALKEARLAQLQERDSFSFHKL 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ I + +PD +VN AA++ V S+ ++ +N++G +LE +C Sbjct: 62 DLSDRDGINALFAAQKPDVVVNLAAQAGVRYSLTNPHAYVDSNLVGFVNILE------AC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + K + S+ VYGS K FS + P S Y+A+K +++ + + H YG Sbjct: 116 RHNETK---HLVYASSSSVYGSNKKMPFSIHHSVDHPVSLYAASKKANELMAHTYSHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + L ++EG + ++ G+ RD+ YV+D V + V Sbjct: 173 LPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNYGKMQRDFTYVDDIVEGVIRV 232 Query: 237 L------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + YNIG N E+ +++ L K T Sbjct: 233 SDNTPQPNPEWSGDEADPGSSSAPYKLYNIGNNQP-------VELMHMIETL-EKCLGKT 284 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + ++G+ P +E+G++ V WY D Sbjct: 285 AEKNLMPIQPGDVPATYADVDDLVRDVGFSPATPIETGISNFVDWYRD 332 >gi|302527316|ref|ZP_07279658.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] gi|302436211|gb|EFL08027.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] Length = 326 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 134/331 (40%), Gaps = 28/331 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GFIGS L + L+ V G L E + D+ D Sbjct: 9 RVLVTGAEGFIGSTLVQELLR-AGATVRAFAHYKPYGTNGYLAEFLDD--VELVPGDVRD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A+ D + + AA + S D ++ TN+ GT + +CL D Sbjct: 66 PGRVAEAVSGC--DTVFHLAALIGIPYSYQAPDSYVETNVAGTH------HVAAACLRHD 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + ST EVYG+ SE+ P P SPY A+K +D L L++ H++G+PV + Sbjct: 118 A----RLVHTSTSEVYGTARSVPISEEHPLQPQSPYPASKIGADMLALSYWHSFGLPVTV 173 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 + N YGP +IP + ++ G G RD+ YV D V L L Sbjct: 174 ARPFNTYGPRQSARAVIPAILAQLHGGVREIRIGSTSPTRDFTYVTDTVAGFLALAGAPA 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD--RRYAI 296 G NIG NE IG L+D L+ + R D RP R Sbjct: 234 TCGRVVNIGTGNE-------ISIGGLID-LLAEITGTEATAREDPDRIRPAGSEVERLVC 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D+ I GW + ++ GL T W N Sbjct: 286 DNRLIGELTGWSTRVSLREGLRHTSDWLKAN 316 >gi|222056323|ref|YP_002538685.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221565612|gb|ACM21584.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 692 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 109/357 (30%), Positives = 155/357 (43%), Gaps = 63/357 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIG+ L L+ + +V++ D L+ G + NLF +LQ DR Sbjct: 332 VLITGGAGFIGTNLADRLLAAGE-RVIIYDNLSRPG--------VEKNLF-WLQEKYGDR 381 Query: 63 ECIRSA-------LKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 +R A L++ +A + +F+A+ V SI N G F LLE R Sbjct: 382 LDVRIADIRNSLLLEQAVSEAKNVFHFSAQVAVTTSIENPAADFAVNAAGAFALLEAIR- 440 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSL---------------DKGLFS----EDMPYNPS 154 L ST++VYG++ D+ L S ED+P N Sbjct: 441 -------KAPAPPTLLFTSTNKVYGAMEGMQLQKNNQRYEPVDRSLQSFGMGEDVPLNFL 493 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSH 210 SPY +K D VL + HTYGI + S YGP+ F + + AI + + Sbjct: 494 SPYGCSKGCVDQYVLDYAHTYGIAAAVFRMSCIYGPHQFGTEDQGWVAHFAIQTLCN-NP 552 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLV--LKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 + LYGDG VRD L+VED V A L L G+ +NIGG ER + Sbjct: 553 ISLYGDGCQVRDLLFVEDLVDAFLLARQLMPEIKGQAFNIGGGPERSTSLLE-------- 604 Query: 269 ALIPKSYSHTEL--IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L H +L + F R G R Y D K + GW P+ ++E G+ K W Sbjct: 605 LLQLLQEIHGDLPSVSFGNWRTGDQRYYISDIRKFSAVSGWEPRHSVEEGVKKLYHW 661 >gi|196230446|ref|ZP_03129308.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] gi|196225376|gb|EDY19884.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] Length = 315 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 148/332 (44%), Gaps = 30/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF------ 54 M++++TGGAGFIGS L+ + + D T+ I ++N+ F Sbjct: 1 MKILLTGGAGFIGSNFADLLLKEGHTLSVFDDFNTFYD-----PAIKRANIAGFGKDVPV 55 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + D+ D E + A++E +PD IV+ AA + V SI +I TNI GT+ +LE RL Sbjct: 56 YEADLRDWEAVERAVREQKPDCIVHLAARAGVRPSIKEPKLYIDTNITGTWHILEAARLH 115 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGH 173 + I T FSEDM N + SPY+ATK +++ + H Sbjct: 116 NVPRVVSASSSSVYGVIKT---------APFSEDMLINQTISPYAATKMATEQFCSNYSH 166 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YGI + YGP P+ I + EG + +GDG RD+ YV+D ++ + Sbjct: 167 LYGIRTISLRFFTVYGPRQRPDLAIHSFTKSIWEGKPINQFGDGTTRRDYTYVDDILQGM 226 Query: 234 YLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L G + + +N+G + +++ A I ++ +I + ++PG Sbjct: 227 RACLTYDGALCDVFNLGESQTTTLNELI--------AAIEQALGKKAIINKMPEQPGDVP 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + + + P + G+ K V W+ Sbjct: 279 LTYANIDKARRLLSYDPHTKIAEGIPKFVEWF 310 >gi|114571036|ref|YP_757716.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10] gi|114341498|gb|ABI66778.1| NAD-dependent epimerase/dehydratase [Maricaulis maris MCS10] Length = 322 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 32/336 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M VTG AGFIG R + + V+ ID L Y L L ++++ F F Sbjct: 1 MTSFVTGAAGFIGFHAARAQL-EAGEDVVGIDNLNPYYDPKLKQARLDQLTRYPGFRFEA 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D E + + + +P I++ A++ V S+ + +N+ G +LE R Sbjct: 60 IDLADHEAVAGLVADVRPQRILHLGAQAGVRYSLEAPFAYARSNLTGHLSVLEAARALGD 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 L + S+ VYG F E D +P+S Y+ATK S + + ++ Y Sbjct: 120 RLEH-------LVYASSSSVYGERSAVPFKECDAAESPASLYAATKRSDELMSASYCSLY 172 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ L M+ G + ++ +G RD+ Y++D V AL Sbjct: 173 GIPATGLRFFTVYGPWGRPDMAYWLFADAMLAGRPIQVFNNGNMERDFTYIDDIVEALSR 232 Query: 236 VLKKGRIGER---YNIGGNNERKNIDIV----FEIGFLLDALIPKSYSHTELIRFIEDRP 288 +L R YNIGG++ + +D++ E+G + D ++ + +P Sbjct: 233 ILADSPARGRHAIYNIGGSSPVRLLDMIETLETELGVVADKVM------------LPMQP 280 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G R D+S+++++ G+ P ++ +GL W+ Sbjct: 281 GDVTRTFADTSRLEADYGFRPSVDLATGLAGFATWF 316 >gi|257875243|ref|ZP_05654896.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC20] gi|257809409|gb|EEV38229.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC20] Length = 336 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL----NSLKEISQSNLFSFLQ 56 M++++TG AGFIG L + L+N + ID L ++ + LK + + F F + Sbjct: 2 MKILITGAAGFIGFHLAKKLLNK-GFDIDGIDNLNDYYDIRLKNSRLKILRDYDNFYFHK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ ++E + ++ +P+ ++N AA++ V SI +I +NI+G +LE R + Sbjct: 61 IDLKNKEKVEDYFEKNRPEIVINLAAQAGVRYSIENPYAYIDSNIVGFLNVLEGCRKYPV 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG FS + + P S Y+ATK S++ + + H + Sbjct: 121 S---------HLLYASSSSVYGGNTTVPFSTNHNVDHPVSLYAATKKSNELMAHTYSHLF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-Y 234 GIP YGPY P+ ++E + ++ G+ RD+ Y++D V + Sbjct: 172 GIPTTGLRFFTVYGPYGRPDMAYFSFTKDILEDKEIKVFNHGKMERDFTYIDDIVEGIDK 231 Query: 235 LVLKKGRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L+ K + E YN+G NN + + + KS Sbjct: 232 LISKVPQPLEEWSDNKNTLDTSFAPYKIYNLGNNNPVPLMRFI--------KALEKSLGK 283 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +++E +PG + D S +++EIG+ P ++E+GL++ V WY Sbjct: 284 EAKKKYLEMQPGDVYKTYADISDLENEIGFKPVTSIENGLDRFVEWY 330 >gi|238619128|ref|YP_002913953.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] gi|238380197|gb|ACR41285.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] Length = 307 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 94/338 (27%), Positives = 154/338 (45%), Gaps = 50/338 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +++GGAGF+GS L L N+ +I + +D L+ + K + Sbjct: 1 MKFLISGGAGFLGSHLIENLANEHEITI--VDDLSTTKYIQLPKNV-------------- 44 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + I+ ++ F+ D I++ AA + + E + +N IGT W+ Sbjct: 45 --KLIKDKIENFKTNEKFDYILHLAARPSPEDYMNNPIETLLSNSIGT----------WN 92 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAW 171 L +K F+ S+ E+YG+ + E+ P S Y K S+ L +A+ Sbjct: 93 ALEIARKSDAIFMYTSSSEIYGNAEVLPIPEEYWGKVNPIGVRSCYDEGKRFSEALTMAY 152 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 YG+ V + N YGP + ++I I + + G + ++GDG+ R +LYV Sbjct: 153 YREYGLDVRIQRPFNVYGPRLREDGNYGRVISRFIYQALRGEDITVFGDGKQTRAFLYVT 212 Query: 228 DHVRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D V A L+ KG G NIG + E K I++ I L KS S+ I+F+ Sbjct: 213 DWVEATKKLLFSKGIKGIVLNIGSDKEVKIIELARMIINLT-----KSKSN---IKFLPP 264 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP R A D +K K + W P+ ++E GL KT+ W+ Sbjct: 265 RPDDPSRRAADITKAKKLLNWEPKVSLEEGLRKTIDWF 302 >gi|320530313|ref|ZP_08031381.1| NAD-binding domain 4 [Selenomonas artemidis F0399] gi|320137456|gb|EFW29370.1| NAD-binding domain 4 [Selenomonas artemidis F0399] Length = 331 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 28/322 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGG GFIGS + L+ + V+VID + G +L ++ + ++ DIC Sbjct: 1 MKSIVTGGCGFIGSHIVDRLLAEGH-DVIVIDNCS-TGRRENLAHHEGNSHLTIIEEDIC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I D + + AA + + SI E+ +N+ GTF +L+ + Sbjct: 59 NYPVIAPLFVGV--DWVFHLAALADIVPSIQKPQEYFRSNVDGTFSVLQAAK-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF+ ++ YG D+ E P PY+ TK + L L W Y +PV+ Sbjct: 109 -AANVKRFMYTASSSCYGIPDRFPTDEQADIRPEYPYALTKRLGEELALHWAKVYNLPVV 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP + + + + + G + G G+ RD+ YV D V A Sbjct: 168 SLCLFNVYGPRSRTSGTYGAVFGVFLGQKLAGKPYTIVGTGEQTRDFTYVTDIVDAFLTA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K +GER+N+G + + + L+D L E++ I RPG Sbjct: 228 AKSDVVGERFNVGSEH-------TYSVNRLVDLL---GGPDAEVVH-IPKRPGEPDCTWA 276 Query: 297 DSSKIKSEIGWFPQENMESGLN 318 D+ KI + W P+ +E G+ Sbjct: 277 DTKKINEMLDWHPKVTLEEGVQ 298 >gi|260062600|ref|YP_003195680.1| putative udp-glucuronic acid epimerase [Robiginitalea biformata HTCC2501] gi|88784167|gb|EAR15337.1| putative udp-glucuronic acid epimerase [Robiginitalea biformata HTCC2501] Length = 340 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 47/355 (13%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDL--------KIQVLVIDKLTYAGNL 40 M+++VTG AGFIG R L +ND +++ L ID+ + A Sbjct: 1 MKILVTGAAGFIGFFATRLLAEKGHHVVGLDNINDYYDPELKFGRLRELGIDRGS-AETF 59 Query: 41 NSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 E S +F+++++ DRE +R+ + DA+ + AA++ V S+ + +I +N Sbjct: 60 GQETESSTLTNVAFVRLNLEDREELRALFERHSFDAVCHLAAQAGVRYSLENPEAYIDSN 119 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSA 159 I+G +LE R C + S+ VYG +K F + D +P S Y+A Sbjct: 120 IVGFLNILENCR---HC------GIGHLVYASSSSVYGQNEKIPFETTDRVDHPISLYAA 170 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 TK S++ + + H YG YGP+ P+ + L ++EG + ++ +G+ Sbjct: 171 TKKSNELMAHTYSHLYGFATTGLRFFTVYGPWGRPDMALFLFTRAILEGRPIQVFNNGEQ 230 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER--------YNIGGNNERKNIDIVFEIGFLLDALI 271 RD+ Y++D + VL+ G R YNIG + K +D + I Sbjct: 231 ERDFTYIDDIAEGVVRVLEDDLSGRRDHREKYKLYNIGNGSPVKLMDFI--------EAI 282 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K T + + +PG R D+ ++ + G+ +++ G+ K V WY++ Sbjct: 283 EKHTGKTAIREMLPAQPGDVTRTWADTGGLQKDYGYRAGSDLDDGIGKFVDWYVN 337 >gi|20090051|ref|NP_616126.1| UDP-glucose 4-epimerase [Methanosarcina acetivorans C2A] gi|19915023|gb|AAM04606.1| UDP-glucose 4-epimerase [Methanosarcina acetivorans C2A] Length = 311 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 26/327 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTGGAGFIGS L L+ + +V+ +D Y + N+++ ++ F ++ Sbjct: 1 MNILVTGGAGFIGSHLIEKLLGEGN-EVICLDNFDNYYDPQIKRNNVELFLENENFQLIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D+ + ++ D + + AA++ + S+ N GT LLE T Sbjct: 60 GDIRDKVLLEEIVQTV--DYVFHEAAQAGIRISVKEPMRPHEINATGTLNLLEAT----- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L+ + K + + S+ VYG ++ F E+ P +P SPY +K +++ + YG Sbjct: 113 -LNSNVK---KIINASSSSVYGKVEYLPFDENHPNHPVSPYGVSKLLAEHYCRVFEELYG 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + YGP P+ I + ++ V ++GDG+ RD+ Y++D VRA + Sbjct: 169 LKSVSLRYFTVYGPRMRPDLAINIFTKAALKNETVAIFGDGKKTRDFTYIDDIVRANLIC 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +KKG + YNIG + I L +I + S +E++ + + G Sbjct: 229 MKKG--SDVYNIGSGHS-------ITINELASKIIEINESESEIV-YTDSMKGDAEHTLS 278 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 +S K EIGW P+ +E GL + W Sbjct: 279 NSKKAWKEIGWKPEVTIEDGLERYAKW 305 >gi|153868723|ref|ZP_01998474.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] gi|152074694|gb|EDN71525.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] Length = 333 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 147/351 (41%), Gaps = 33/351 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS L L+ + +V+++D L G L++LK +F QVD+ Sbjct: 1 MRVLITGGAGFIGSHLAEMLLEEGH-EVVIVDNLA-CGRLDNLKGFQSHPNLTFHQVDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S + + + + A + + SI + TN+ GT +LE ++ Sbjct: 59 DRIALASCFEGV--NWVFHLAGRADIVPSIEDPVLYFETNVTGTLNVLECSK-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ++ YG D E P P PY+ TK + LVL W Y L Sbjct: 109 -AAGVKRLVYAASSSSYGIPDIYPTPESTPIKPQYPYALTKYMGEELVLHWAQLYNFSAL 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP + + + + I G + GDG RD+ YV D A Sbjct: 168 SLRLFNVYGPRSRTTGAYGAVFGVFLAQKINGKPFTVVGDGTQTRDFTYVTDVASAFVSA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K G N+G N + + L++ L E+I +I RPG Sbjct: 228 AKSNVSGIAMNVGSGNH-------YSVNRLVELL------KGEII-YIPKRPGEPDCTFG 273 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 D++ I+ + W P + E G+ + + N+W P++ + S W Sbjct: 274 DTTLIRKTLNWEPMISFEEGVQRMLEHI--NDWKKAPIWDKESIAQATSSW 322 >gi|255325137|ref|ZP_05366243.1| UDP-glucose 4-epimerase [Corynebacterium tuberculostearicum SK141] gi|255297702|gb|EET77013.1| UDP-glucose 4-epimerase [Corynebacterium tuberculostearicum SK141] Length = 328 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V +ID + GN ++ E ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLVEQGHDVTIIDNFS-TGNREAVPEAAR-----VIEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ L E + +++FAA S V S+ E+ N++ T LL R Sbjct: 54 DKAA--EVLGEGGFEGVIHFAARSLVGESVEKPVEYWQHNVVTTLTLLNAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG D+ +EDMP P++PY ATK + DY++ ++ H YG+ Sbjct: 104 -DNDVKNLVFSSTAATYGEPDQVPITEDMPTQPTNPYGATKLAIDYMITSFAHAYGLGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIP+ + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPIVLQVALGHRDKIFMFGDDWDTADGTPVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L+ G YN+ G+ + ++ V E + K H Sbjct: 223 RDLADAHVLALESNESGAHRIYNL-GSGDGYSVKQVIE-------MCRKVTGHDIPAEVA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S KI+ E+GW P Sbjct: 275 PRRAGDPATLIASSEKIQRELGWNP 299 >gi|197122331|ref|YP_002134282.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|196172180|gb|ACG73153.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] Length = 310 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ----VLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 R+++TGGAGFIGS + DL +Q V V+D +L+S K + F V Sbjct: 4 RILITGGAGFIGSTIA-----DLFVQAGWDVAVLD------DLSSGKRENVPQGARFYPV 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ + KE +P I + AA+ V RS+ N+ G L++ S Sbjct: 53 DVRSAAAAEAIRKE-RPQVICHHAAQIDVRRSMADPRFDADVNVGGLLNLMQAAAAAGSV 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + S YG + E P P S Y A KA+S+ + + GI Sbjct: 112 -------EHVLFASSGGATYGDTEVIPTPETHPQAPVSHYGAAKAASELYLGVYRAALGI 164 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 PV +N YGP P ++ + R++EG +YGDG RD+++V D RA Sbjct: 165 PVAALRYANVYGPRQDPHGEAGVVAIFCGRLLEGRPCTVYGDGGQTRDYVFVGDVARANL 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L ++ G N+G E +++ ++ A + ++ RPG RR Sbjct: 225 LAAERRHDGP-LNVGTGVE-TDVNALY-------AHLARAAGVDRPAEHAPARPGEQRRS 275 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ID S IGW P+ + GL +T+ W+ Sbjct: 276 CIDPSLAARAIGWRPEVPLADGLARTLEWF 305 >gi|84496950|ref|ZP_00995804.1| putative GDP-D-mannose dehydratase [Janibacter sp. HTCC2649] gi|84383718|gb|EAP99599.1| putative GDP-D-mannose dehydratase [Janibacter sp. HTCC2649] Length = 314 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 32/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS L R L+ +I +V+ ID L+ N + + L+ I Sbjct: 1 MKVVVTGGAGFIGSNLGRELLARPEIDEVVAIDNLSTGSRANL-----EGTDITLLEGTI 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A AIV+ A V RS++ N GT +L+ R Sbjct: 56 LDPAALDEACA--GASAIVHLGALPSVPRSVIDPLASHHANATGTLEVLQAAR------- 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYG+ + E M P SPY+ +K +++ L++GHTYG+P Sbjct: 107 --RAGDLHVISASSSSVYGANRELPKRESMRTAPISPYAVSKQATEAYTLSFGHTYGMPT 164 Query: 180 LLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 L N YGP H ++P I + G + ++GDG+ RD+ YV R + Sbjct: 165 LAFRFFNVYGPLQAAGHAYAAVLPAFIDAALRGVPLTIHGDGEQTRDFTYVGTVTRVIAD 224 Query: 235 LVLKKGRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 V+++ E N+ G+ N+ +V E+ +L + ++E R G R Sbjct: 225 AVVRRVNDLEAINLAFGSRTSLNV-VVDELADIL--------GERPAVEYVETRAGDVRD 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++++ S + GL TV W+ Sbjct: 276 SQADNARLLSHFPDVAPVPLREGLQATVDWF 306 >gi|313902580|ref|ZP_07835980.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] gi|313467146|gb|EFR62660.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] Length = 347 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 145/339 (42%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRY-LVNDLKIQVLVIDKLTYAGNLNS-------LKEISQSNLF 52 MRL++TGGAGFIGS L + LV + VL Y L L+ S F Sbjct: 1 MRLLITGGAGFIGSHLAEWALVQGADVVVLDAFASNYDPALKQANVELLRLRAARASGSF 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F++ D+ + E + + + + AA V S+ ++ N+ GT L E R Sbjct: 61 RFVRGDVRNGELLDRLFARHRFTHVAHLAALPGVRPSLAEPRRYLEANVGGTVALFEAIR 120 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + R + S+ VYG+ G + EDMP P SPY+A+KA+++ L + Sbjct: 121 -------RHPGTVRRVVVASSSSVYGA-QPGPWREDMPPAPLSPYAASKAAAEQYALTYQ 172 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 GI V YGP P+ I R + G + ++GD Q+ RD+ V D VR Sbjct: 173 RLLGIGVSCLRYFTVYGPRQRPDMAIARFTARALAGQPIPVFGDIQSRRDYTEVGDVVRG 232 Query: 233 LYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + L + G E YN+G ++ +G +L I + PG Sbjct: 233 TWAALLEPGTGFEIYNLGSGGPFTLQQLIAALGRVLHRPI--------ALDLQPPAPGDA 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D + + +G+ P+ ++E GL + V W ++ W Sbjct: 285 PATWADIGRARERLGYEPRVSLEQGLARYVAWVRWHHQW 323 >gi|260598179|ref|YP_003210750.1| hypothetical protein CTU_23870 [Cronobacter turicensis z3032] gi|260217356|emb|CBA31374.1| Uncharacterized 37.6 kDa protein in cld 5'region [Cronobacter turicensis z3032] Length = 337 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 156/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ QV+ ID L Y NL L + Q + F F + Sbjct: 1 MKFLVTGAAGFIGFHVSERLLA-AGHQVIGIDNLNDYYDVNLKLARLNLLKQHSAFHFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + + QP +++ AA++ V S+ + N+ G +LE R Sbjct: 60 IDLADRQAMETLFAQHQPQRVIHLAAQAGVRYSLENPHAYADANLTGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG K FS +D +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKVEHL--LYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + +++GS + +Y GQ RD+ Y++D A+ Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFKFTQAIVKGSSIDVYNHGQMRRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG ++ +D + + + K+ Sbjct: 231 LQDVIPQADPQWTVENGSPATSSAPYRVYNIGNSSPVALMDYI--------SALEKALGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D+S + IG+ PQ ++E G+ + V WY Sbjct: 283 EAQKNMLPMQPGDVLETSADTSALYKVIGFKPQTSVEEGVKRFVEWY 329 >gi|163849954|ref|YP_001637997.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661559|gb|ABY28926.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 367 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 154/350 (44%), Gaps = 49/350 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGF+G+ L L + V++ D L AG NL L E + + + DI Sbjct: 15 ILVTGGAGFVGANLADRLAAEGHT-VIIYDALARAGVERNLAWLTE-RHGDRIAPVIADI 72 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + A+ E A+ +FAA+ V S+ + + N+ GT LLE R Sbjct: 73 RDRDELARAVGEV--GAVFHFAAQVAVTTSLTAPRDDMEVNLGGTLNLLEALRA------ 124 Query: 120 QDKKDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSAT 160 + + L ST++VYGSL D L ED P + +PY + Sbjct: 125 --RGEAVPLLFASTNKVYGSLPDVALTLAGDAYLPEDPSLRQRGIGEDRPLDFHTPYGCS 182 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K ++D VL + TYG+P ++ S YGP + + + R ++G + LYGDG Sbjct: 183 KGAADAYVLDYARTYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALKGEPITLYGDG 242 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGN--NERKNIDIVFEIGFLLDALIPK 273 + VRD L+V D V A L + R+ G +N+GG N ++ G LL I Sbjct: 243 RQVRDILHVGDCVAAYQAALARIDRVAGRAFNLGGGPANAVSLRGLIAHAGQLLGREI-- 300 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + RPG R Y D S+ +G + G+ + W Sbjct: 301 ------AVETGPWRPGDQRYYVSDPSRAVEALGLARPLSWREGVAQLAGW 344 >gi|282923791|ref|ZP_06331468.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9765] gi|282593033|gb|EFB98034.1| UDP-glucose 4-epimerase [Staphylococcus aureus A9765] Length = 326 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIG+ +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 6 RVLITGGAGFIGA----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + + + Sbjct: 58 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIK 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 118 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 171 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 230 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K IG YNIG +++ IG L KS H F E R G + Sbjct: 231 IMEHKDAIGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH----EFKEARKGDIKHS 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 283 YADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 314 >gi|261340475|ref|ZP_05968333.1| UDP-glucuronate 5'-epimerase [Enterobacter cancerogenus ATCC 35316] gi|288317569|gb|EFC56507.1| UDP-glucuronate 5'-epimerase [Enterobacter cancerogenus ATCC 35316] Length = 334 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGS + + L+ DL QV+ +D L Y NL + ++ +SN FSF ++ Sbjct: 1 MKFLVTGAAGFIGSHVSKRLL-DLGHQVVGMDNLNDYYDPNLKLARLDLLKSNNFSFHKL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D +++ AA++ V S+ + N++G +LE R Sbjct: 60 DLADREGMAALFADEKFDRVIHLAAQAGVRYSLDNPHAYADANLVGHLNVLEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K Q L S+ VYG K FS +D +P S Y+ATK +++ + + H Y Sbjct: 115 ---HNKVQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLYN 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + MIEG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMIEGKPIDVYNYGKMKRDFTYIDDIAEAIIRL 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG ++ ++++ I L DAL ++ + Sbjct: 231 QDVIPQANAQWTVESGSPATSSAPYRVYNIGNSSP---VELMDYITALEDALGKEAEKNM 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +PG + D+ + IG+ PQ +++ G+ V WY Sbjct: 288 MPI-----QPGDVLETSADTQALYEVIGFKPQTSVKDGVKHFVDWY 328 >gi|332142009|ref|YP_004427747.1| capsular polysaccharide biosynthesis protein I [Alteromonas macleodii str. 'Deep ecotype'] gi|327552031|gb|AEA98749.1| capsular polysaccharide biosynthesis protein I [Alteromonas macleodii str. 'Deep ecotype'] Length = 338 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 166/351 (47%), Gaps = 42/351 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIG+A+ +YL+N QV+ ID + L+ +K + ++LFS Sbjct: 1 MKILVTGAAGFIGAAVSQYLINRGD-QVVGIDNINDYYDVNLKHARLDEIKSSTAADLFS 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+++ + +R+ + + +E + D +V+ AA++ V S+ + ++ +NI+G +LE R Sbjct: 60 FIEMGVEERDKMAALFEEHKFDRVVHLAAQAGVRYSLENPNAYVDSNIVGFVNILEGCR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWG 172 + + S+ VYG+ + FSE + S Y+A+K +++ + + Sbjct: 119 --------HNNVEHLVYASSSSVYGANETMPFSEQHNVDHQVSLYAASKKANELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP+ P+ + ++EG + +Y G + RD+ Y++D V Sbjct: 171 HLYDLPTTGLRFFTVYGPWGRPDMALFKFTKAILEGKTIQVYNYGNHRRDFTYIDDIVEG 230 Query: 233 LYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----- 286 + L + E ++ G N + +++ + + A P L++FIE Sbjct: 231 VIRSLDNVAKPNENWD-GSNPDPSTSKAPYKV-YNIGAQTP-----VHLLKFIETLESAL 283 Query: 287 -----------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG D S + + G+ P ++E+G+ V WY D Sbjct: 284 GIEAKKELFPMQPGDVPDTYADVSSLVEDTGYQPSTDVETGVKAFVDWYRD 334 >gi|291007607|ref|ZP_06565580.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 305 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 28/316 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGG+GF+G A+ R V + V VID+ L E + +L + + D+ D Sbjct: 1 MVTGGSGFVGRAVVRAFV-ERGTPVTVIDQ-------QPLPEDLRGDLVTHVAGDLGDPA 52 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +A+ E IV+ AA + V RS+ E N+ T LLE RL + Sbjct: 53 AREAAVTEGAA-GIVHLAAITSVLRSVDRPAETYAANVAVTQELLELARL---------R 102 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 +F+ ST+ V G + +G SE +P P +PY ATKA+ + L+ + YG+ Sbjct: 103 GLGQFVLASTNAVVGDIGRGTISESLPLRPLTPYGATKAACEMLLSGYAGAYGLATCALR 162 Query: 184 CSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +N YGP + IP + + G+ V +YGDG RD+++V+D VR + K Sbjct: 163 FTNIYGPGMGHKDSFIPRLMRAALAGAGVEVYGDGSQSRDFVHVDDVVRGVLAAWDKQYS 222 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIK 302 G IG +++ + +P ++ + + G +D +K Sbjct: 223 GTAI-IGAGRSISVTELIEAVRTATGRPLPVTH--------VPAKNGEMPAVIVDVAKAG 273 Query: 303 SEIGWFPQENMESGLN 318 E+G+ P + GL Sbjct: 274 RELGYTPSVELTDGLR 289 >gi|317121344|ref|YP_004101347.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] gi|315591324|gb|ADU50620.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] Length = 370 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 148/342 (43%), Gaps = 27/342 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQ--SNL 51 MRL++TGGAGFIGS L + V+V+D T N+ L+ + + Sbjct: 1 MRLLITGGAGFIGSHLAELALLQ-GADVVVLDNFTANYDTALKQANVELLRRRAARATGG 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F++ D+ + E + + + + AA V S+ ++ N+ GT L E Sbjct: 60 FRFVRGDVRNGELLDRLFARHRFTHVAHLAALPGVRPSLAEPRRYLEANVGGTVALFEAV 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + + R L S+ VYG+ G + EDMP P SPY+A+KA+++ L + Sbjct: 120 R-------RHGRGVERVLVASSSSVYGA-QPGPWREDMPLAPLSPYAASKAAAEQYALTY 171 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V YGP P+ I + G + + GD ++ RD+ V D VR Sbjct: 172 HRLLGVGVTCLRFFTVYGPRQRPDMAIAKFTACALAGRPIPVLGDIRSRRDYTEVGDVVR 231 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + +L+ G + YN+G D++ +G +L I + PG Sbjct: 232 GAWAALLEPGADFQVYNLGSGRPVTLQDLIAALGRVLHRPI--------ALDLQPPAPGD 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D S+ + +G+ P+ ++E GL + V W +R Sbjct: 284 APATWADISRARERLGYEPRVSLEQGLARYVAWVRARGPGYR 325 >gi|94986341|ref|YP_605705.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] gi|94556622|gb|ABF46536.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] Length = 334 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 48/334 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+V GGAG+IGS R L +V+V D NL+S + ++ D+ Sbjct: 1 MKLMVVGGAGYIGSHTVRQL-RQAGYEVVVFD------NLSSGHAAALPPEVPLVRGDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ AL+ +PDA+++FAA V S+ + N++G+ LL+ + + Sbjct: 54 DLEAVKGALEAHKPDAVIHFAALIEVGESMRAPGRYYRNNVVGSLNLLQ-------AIVK 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F ST VYG+ D ED P +P S Y TK ++ ++ A+ +G+P + Sbjct: 107 TRKVPLVF--SSTAAVYGTTDAVPIPEDAPLHPESVYGETKLMTERMIHAFHVAHGLPYI 164 Query: 181 L--------SNCSNNYGPYHFPEK--LIPLA-ITRMIEGSHVFLYG------DGQNVRDW 223 + + G H P K LI LA +T + + + ++G DG +RD+ Sbjct: 165 ILRYFNVCGAAPDGQIGEAH-PHKTHLIELACLTALGQREQMMIFGADYPTPDGTCIRDY 223 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 ++V D HV A+ + + R YN+G G + + +D V DA+I + Sbjct: 224 IHVLDLADAHVLAVQALAQGQRDAATYNVGLGYGFSVLQVLDAV-------DAVIAEDGL 276 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG R D+ +I E+G+ PQ Sbjct: 277 PPLKREIAPRRPGDPPRLVADARRIVEELGFKPQ 310 >gi|323487928|ref|ZP_08093185.1| dTDP-glucose 4,6-dehydratase [Planococcus donghaensis MPA1U2] gi|323398412|gb|EGA91201.1| dTDP-glucose 4,6-dehydratase [Planococcus donghaensis MPA1U2] Length = 322 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 25/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIGS L Y +N + Q++ ID T A + Q+ +S+ +VDI + Sbjct: 6 ILVTGGHGFIGSNLIHYYLNKYPQYQLVNIDYNTEAVSPEKPSGSDQAARYSYHRVDIRN 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + + I++ AAE+ ++ + + TN++GT LL+ + W + Sbjct: 66 AYAINHLFELYDITDIIHCAAETRSEKQVGEIRLYEQTNVLGTMNLLQAAQSAWMESAHQ 125 Query: 122 KKDQFR---FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K+++ F IS + Y S YS +K +D ++ + G+ Sbjct: 126 PKEKYATSCFHHISLTDAY---------------KPSLYSDSKKRADDMIGEFHKKTGLN 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + +GP E+LIP I + ++G +N+R+WL+V D A+ V Sbjct: 171 VITTASPEVFGPMQKEEELIPAYIDQALKGKLGIFEESAENIRNWLFVSDLCEAIDTVFH 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G G RY IG N + ++ + I L+ P +YSH + + Y+ + Sbjct: 231 LGDAGGRYEIGYNARMGDRELAWCITSLMGTHFPGNYSHQKQSNI------DNSAYSPEK 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + G P E GL T WY + N Sbjct: 285 PVQQKLPGIAPFTPFEKGLRITFNWYSNKN 314 >gi|224370058|ref|YP_002604222.1| CapD1 [Desulfobacterium autotrophicum HRM2] gi|223692775|gb|ACN16058.1| CapD1 [Desulfobacterium autotrophicum HRM2] Length = 353 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 156/343 (45%), Gaps = 38/343 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M++++TG AGFIG L + L+ + V +D L A L+ +++ + FSF + Sbjct: 22 MKIMITGAAGFIGFFLGKKLLENGH-TVFGVDNLNDYYEVALKKGRLEILNRFDSFSFER 80 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + + D +VN AA++ V SI ++ +N++G +LE R Sbjct: 81 LDISDRSGVERLFGANRFDVVVNLAAQAGVRYSIDNPHAYVDSNLVGFANILEGCRHGRV 140 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG K FS D +P S Y+ATK S++ + A+ H Y Sbjct: 141 G---------HLVYASSSSVYGQNKKMPFSVTDSVDHPVSLYAATKKSNELMAHAYAHLY 191 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 GIP+ YGP+ P+ + TR I G + +Y G RD+ Y++D V+ + Sbjct: 192 GIPMTGLRFFTVYGPWGRPD-MAYFKFTRAILAGEPIDVYNHGNMRRDFTYIDDIVKGVV 250 Query: 235 LVLKKGRI-GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V++K + GE YNIG N E+G ++ L K + Sbjct: 251 KVMEKPPVPGESLADSGTSAPYRLYNIGNNQP-------VELGHFIEVL-EKHLGQKAVK 302 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + + G+ P+ +++ GL + V WY Sbjct: 303 NMLPMQPGDVPETYADIETLVRDTGFTPETSIDEGLGRFVQWY 345 >gi|85714632|ref|ZP_01045619.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] gi|85698517|gb|EAQ36387.1| dTDP-glucose 4,6-dehydratase [Nitrobacter sp. Nb-311A] Length = 351 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 145/337 (43%), Gaps = 33/337 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 +++VTG GFIGS L +L+ Q + Y + NS + +++ Sbjct: 22 KVLVTGADGFIGSHLTEHLI----AQGANVRAFVYYNSFNSWGWLDETDAQVKRELDVFA 77 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R+A++ D + + AA + S D ++ TN+ GT +++ R Sbjct: 78 GDIRDPNGVRTAMRGC--DVVFHLAALIAIPYSYHSPDAYVDTNVRGTLNVVQAAR---- 131 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + ST EVYG+ +E+ P SPYSATK +D L +++ ++G Sbjct: 132 -----DLGVERVVHTSTSEVYGTARIVPITEEHPLQGQSPYSATKIGADQLAMSFHLSFG 186 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP +IP IT++ G G RD+ YV D VR V Sbjct: 187 TPVSIIRPFNTYGPRQSARAVIPTIITQIASGVKRIKLGAMTPTRDFNYVRDTVRGFVAV 246 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RR 293 + + +G+ N+G N E D I + + + RP R Sbjct: 247 GECDQAVGKVLNVGSNFEISIGDTASLIAQRMGKDVEFELDQQRV------RPAGSEVER 300 Query: 294 YAIDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 D++KI GW P+ + + GL++T+ W+ D Sbjct: 301 LWADNTKINELTGWTPEYARRDGLCRGLDETIAWFSD 337 >gi|75761580|ref|ZP_00741535.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218898581|ref|YP_002446992.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] gi|74490927|gb|EAO54188.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544627|gb|ACK97021.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] Length = 320 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 37/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIG + + L+ D K +V ++D L + N + NL +Q DI Sbjct: 1 MKILVTGGAGFIGRWVVKRLLQD-KHEVWILDNLANSTTANITEFAHDLNLKQCIQGDIK 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + D + AA +V SI A + IGTF LLE+ CL+ Sbjct: 60 DKKLVAQLFENNSFDLCYHLAASINVQDSIDDARATFENDTIGTFNLLEQ------CLNY 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D K F +ST VY DK SE P P+SPY+ +K +++ +VL++ + Y Sbjct: 114 DVKMVF----MSTCMVY---DKATNIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYK 166 Query: 177 IPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH---- 229 +PV++ N YGP+ ++ + I ++ + +YGDG+ RD LYVED Sbjct: 167 LPVVVIRPFNTYGPFQKTGGEGGVVAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFV 226 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A Y G I G + +I+ + E LI + + + I + Sbjct: 227 VAAGYSAKANGHIIN----AGTGQDISINKLAE-------LISGNKVSIQHVTHIHPQ-S 274 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ + K K+ + W P+ ++E G+ KT W Sbjct: 275 EIQKLLCNYEKAKTILNWEPKVSLEDGVIKTEEW 308 >gi|116753458|ref|YP_842576.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] gi|116664909|gb|ABK13936.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] Length = 310 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 151/326 (46%), Gaps = 35/326 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++ VTGGAGFIGS + R L ++ V VID ++ G +L+ + F++ DI D Sbjct: 5 KIAVTGGAGFIGSNIVRALCDEN--DVTVIDNMS-TGRRENLRGLE--GRIRFVECDIND 59 Query: 62 RECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I+ +EF+ D +++ AA V RSI+ +NI GT +L C + Sbjct: 60 ---IKMLKREFESVDYVLHQAALPSVQRSIMDPMATNRSNIDGTLSVLVAA---MDCGVK 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG + E + P SPY+ TK ++ + YGI + Sbjct: 114 ------RVVFASSSAVYGDSPELPKRESLIPRPMSPYAVTKLVGEHYCRVFYEIYGIECV 167 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 N +GP P +IP I ++ GS +YGDG+ RD++YV+D VRA + Sbjct: 168 SLRYFNVFGPGQDPASEYAAVIPKFIDAVLSGSQPVVYGDGEQTRDFVYVDDVVRANILA 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDRR 293 L G G NIG + LLDA+ + K Y H + E RPG R Sbjct: 228 CLSPGAPGLAINIGTG-------YATSLNRLLDAIGRVLKRYIHPI---YTEPRPGDVRD 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNK 319 D + + +G+ P+ +E GLN+ Sbjct: 278 SVADITLAREVLGYAPEYGLEDGLNE 303 >gi|115345676|ref|YP_771857.1| UDP-glucose 4-epimerase [Roseobacter denitrificans OCh 114] gi|115292997|gb|ABI93449.1| UDP-glucose 4-epimerase [Roseobacter denitrificans OCh 114] Length = 342 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 35/278 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAG++GSA RY V + V+V D L + + + L ++ DI Sbjct: 1 MRILITGGAGYVGSACLRY-VAEQGHDVMVYDSLV----MGHRRAVDGHPL---VRGDIA 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + LK+F DA+++FAA ++V S+ + + N+ GT LL R Sbjct: 53 DTALLTQTLKDFGADAVMHFAAATYVGESVENPEYYYRNNVSGTLSLLNAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R L ST YG + SE P +P SPY+ TK + ++++ + H YG+ Sbjct: 105 -AAGVNRLLFSSTCATYGMAEADTMSEATPLDPFSPYARTKLAVEWMIRDFAHAYGMGFT 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 L ++ +G H PE LIPL + + + + ++G DG +RD++ Sbjct: 164 LLRYFNASGADADGRHGEDHTPESHLIPLVLQVPLGQRDKIMVFGDDYPTPDGTCIRDYV 223 Query: 225 YVEDHVRALYLVLKKGRIG--ERYNIGGNNERKNIDIV 260 + D A L ++ +G E +NIG N + + I+ Sbjct: 224 HTRDLASAHLLAIEATEVGTDEIFNIGTGNGQSVMQII 261 >gi|206563874|ref|YP_002234637.1| putative UDP-glucuronic acid decarboxylase [Burkholderia cenocepacia J2315] gi|198039914|emb|CAR55891.1| putative UDP-glucuronic acid decarboxylase [Burkholderia cenocepacia J2315] Length = 335 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 152/345 (44%), Gaps = 39/345 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C LV + V +D L LN + ++ S F F++ D+ Sbjct: 14 RVLVTGGAGFLGSYVCERLVMEGAF-VTCVDSLLTGRKLN-VADLKASGRFEFVKGDVS- 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L + Q D I N A + + + TN++G CL+ Sbjct: 71 -----LGLPQLQVDEIWNLACAASPPTYQIDPVHTMMTNVLG----------MNHCLALA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 ++ R Q ST E+YG D G+ + Y P + Y K +++ L + + Sbjct: 116 RRTGARVFQASTSEIYG--DPGVHPQMETYRGNVNTIGPRACYDEGKRAAEALCYDYYRS 173 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ V ++ N YGP P +++ I + G+ + +YGDG+ R + +V D + Sbjct: 174 HGVDVRVARIFNTYGPRMSPRDGRVVSNFIVAALNGAALEIYGDGRQTRSFCFVSDLIDG 233 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ R +G NIG E I++ ++ I S S D P H Sbjct: 234 FFSLMDAPRNVGTPVNIGNPGEFTMIELAEQV-----LAITGSTSEIVFRPLPIDDP-HQ 287 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 R+ D S +E+GW P +++ GL +TV Y W P+ + Sbjct: 288 RKP--DISVAATELGWRPAIDLDEGLRRTV-DYFSRELWLAPVLR 329 >gi|228912645|ref|ZP_04076301.1| NDP-sugar epimerase [Bacillus thuringiensis IBL 200] gi|228846988|gb|EEM91986.1| NDP-sugar epimerase [Bacillus thuringiensis IBL 200] Length = 302 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 147/313 (46%), Gaps = 36/313 (11%) Query: 16 LCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSFLQVDICDRECIRSA 68 +C+ L+ + V+ ID GN+ SL+ S+ F F+Q DI + + + Sbjct: 1 MCQALLKNSAYHVVGIDHFIGPTPATLKTGNIQSLE---LSSRFQFIQEDILNTD-LSKL 56 Query: 69 LKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLWWSCLSQDKKDQF 126 L++ D + + AA V R+ G D ++T NI+ T LLE + K D Sbjct: 57 LQDI--DVVYHLAAIPGV-RTSWGKDFQPYVTNNIMVTQQLLEACK-------HIKLD-- 104 Query: 127 RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSN 186 +F+ IST VYG G SED+ P SPY TK S ++L + + IP+++ Sbjct: 105 KFIHISTSSVYGE-KSGAVSEDLLPTPLSPYGVTKLSGEHLCHVYHKNFHIPIVILRYFT 163 Query: 187 NYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--KKGRIGE 244 YGP P+ I +++E + ++GDG RD+ Y++D +R L KK IGE Sbjct: 164 VYGPRQRPDMAFHRLIKQLLEDKPLTIFGDGTQTRDFTYIDDCIRGTVAALETKKNIIGE 223 Query: 245 RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 NIGG + +DI+ +++ K + F++ PG ++ D SK + Sbjct: 224 VINIGGKEQASILDII--------SMLEKISGKSATKNFLKSVPGEPKQTWADISKASTL 275 Query: 305 IGWFPQENMESGL 317 + + P ++ GL Sbjct: 276 LQYSPTVSLSDGL 288 >gi|221200578|ref|ZP_03573620.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD2M] gi|221209235|ref|ZP_03582225.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD2] gi|221170891|gb|EEE03348.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD2] gi|221179919|gb|EEE12324.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia multivorans CGD2M] Length = 335 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C LV + V+ +D L LN + ++ S F FL+ D+ Sbjct: 14 RVLVTGGAGFLGSYVCERLVVE-GAHVVCVDSLLTGRKLN-VADLKASGRFEFLKADVT- 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L + Q D I N A + + TN++G CL+ Sbjct: 71 -----LGLPQLQVDEIWNLACAASPPTYQHDPVHTMMTNVLG----------MNHCLALA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 +K R Q ST E+YG D + + Y P + Y K +++ L + T Sbjct: 116 RKTGARVFQASTSEIYG--DPSVHPQMETYRGNVNTIGPRACYDEGKRAAEALCYDYYRT 173 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ V ++ N YGP P +++ I + G + +YGDG R + +V D + Sbjct: 174 YGVDVRVARIFNTYGPRMSPRDGRVVSNFIVGALNGEPLEIYGDGLQTRSFCFVSDLIDG 233 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI-RFIEDRPGH 290 + ++ R +G NIG E I+ L ++ + S +E++ R + H Sbjct: 234 FFCLMGAERNVGMPVNIGNPVEFTMIE-------LAQKVLALTGSPSEIVFRPLPIDDPH 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 RR D S +E+GW P +++ GL +TV Y W P+ + Sbjct: 287 QRRP--DISVAATELGWRPCVDLDEGLRRTV-DYFARELWIAPMLQ 329 >gi|144973|gb|AAA23297.1| ORF3 [Corynebacterium diphtheriae] gi|144977|gb|AAA23300.1| open reading frame [Corynebacterium diphtheriae PW8] Length = 328 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 50/330 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V ++D LT GN +++ + +F++ DI Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLEQGHEVTIVDNLT-TGNRDAVPLGA-----TFVEGDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + L DA+++FAA S V S+ DE+ N++ T LL+ Sbjct: 53 -KDVAENVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAM--------- 102 Query: 121 DKKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ R + S T YG + +ED P +P++PY ATK S DY + ++ H YG Sbjct: 103 -KRNNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAA 161 Query: 180 LLSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 N G Y LIPL + + +F++G DG +RD+++ Sbjct: 162 TSLRYFNVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + D A L L+ G +N+G G + ++ ID E+ H Sbjct: 222 IRDLADAHILALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREV-----------TGHPIP 270 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S+K +SE+GW PQ Sbjct: 271 AEVAPRRAGDPAVLIASSAKAQSELGWKPQ 300 >gi|157363944|ref|YP_001470711.1| NAD-dependent epimerase/dehydratase [Thermotoga lettingae TMO] gi|157314548|gb|ABV33647.1| NAD-dependent epimerase/dehydratase [Thermotoga lettingae TMO] Length = 305 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 29/326 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ +V+V+D L +G + +L + + F Q I D Sbjct: 4 VLVTGGAGFIGSHLVDALIEKGH-RVVVVDNLV-SGKIENLNKNAL-----FYQQSIEDD 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + D + + AA++ V S+ + TNI+G+ +LLE++ K Sbjct: 57 EMMERVFMLHRFDFVFHLAAQASVSVSVKEPIKDAKTNILGSLVLLEKSV---------K 107 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +F+ ST +YG +E + NP+SPY K S + + + + + + Sbjct: 108 HGVKKFIFSSTGGAIYGDNVPLPTNEAIGPNPASPYGIAKRSVEMYLEFYKNEKSLNYIA 167 Query: 182 SNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YGP P +I + +RM++G V ++GDG+ VRD++YV+D V A L ++ Sbjct: 168 LRYGNVYGPRQDPNGEAGVIAIFSSRMLKGEDVHIFGDGEYVRDYVYVKDVVTANLLAME 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 K G YNI G +++ +F+ +L + YS + + R G R+ +DS Sbjct: 228 KDFTG-IYNI-GTGVGTSVNALFK---MLSTI--TGYSKQPI--YSSPRKGDLRKSILDS 278 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 K + E+GW P + GL TV ++ Sbjct: 279 KKAELELGWHPVTELSDGLKMTVEFF 304 >gi|332702497|ref|ZP_08422585.1| CDP-paratose 2-epimerase [Desulfovibrio africanus str. Walvis Bay] gi|332552646|gb|EGJ49690.1| CDP-paratose 2-epimerase [Desulfovibrio africanus str. Walvis Bay] Length = 367 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 63/356 (17%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIG+ L L + +VL++D L+ G NL LK + +L + D+ Sbjct: 20 LVTGGAGFIGTNLSHRLAGQGR-RVLILDNLSRPGGERNLAWLKAM-HGDLVTAQTADVR 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + SA++ DA+ + AA+ V S+ N GT +LE R S Sbjct: 78 DARAVASAVQ--GADAVFHLAAQVAVTTSVRNPRADFEVNAAGTLNVLEALR------SL 129 Query: 121 DKKDQFRFLQISTDEVYGSL--------------------DKGLFSEDMPYNPSSPYSAT 160 + F ST++VYG L + G+ +ED P + SPY + Sbjct: 130 ENPPPLVF--TSTNKVYGKLANLELLEGDTRYAPVDALVAEHGV-AEDRPLDFYSPYGCS 186 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K ++D VL + YG+ + S YGP+ + + + +EG + +YG+G Sbjct: 187 KGAADQYVLDYARIYGLRAVAMRMSCIYGPHQSGTEDQGWVAHFLISALEGRGLTIYGNG 246 Query: 218 QNVRDWLYVEDHVRALYLVLK-----KGRIGERYNIGGNNER-----KNIDIVFEIGFLL 267 + VRD L+VED V A L +K +GR +N+GG + + +D++ E+G Sbjct: 247 KQVRDVLWVEDLVDAFLLAVKLADDLRGRA---FNMGGGPDNAISLLELLDMMRELG--- 300 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + P S + + + RPG + D+ ++ GW P+ + G+ W Sbjct: 301 --VTPASMA------YGKGRPGDQAWFVADTGGFEAATGWKPRMSKRDGVAALTKW 348 >gi|209548016|ref|YP_002279933.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533772|gb|ACI53707.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 326 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 139/325 (42%), Gaps = 21/325 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTG GFIGS L LV ++V + + + L + F + D+ D Sbjct: 3 KALVTGADGFIGSHLVETLVRS-GVEVRALCQYNSFSSWGWLDQSEYRGKFEVILGDVRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +RS ++ D I + AA + S +I TN+ GT +L+ Sbjct: 62 PAQMRSVARDV--DTIFHLAALIAIPYSYQAPSSYIDTNVHGTLNVLQGAL--------- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R +Q ST EVYG+ SE P SPYSA+K +D + ++ ++ +PV + Sbjct: 111 DAGVGRVIQTSTSEVYGTARFVPISESHPLQAQSPYSASKIGADAIAYSYHSSFDLPVTI 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 + N YGP +IP I++++ G G RD+ +V+D L L Sbjct: 171 ARPFNTYGPRQSARAVIPTVISQLLSGRRTLKLGALSPTRDFNFVQDTCDGFLALAACDK 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDS 298 IG+ NIG E D V I ++ I L RP + R D+ Sbjct: 231 AIGQTVNIGSGGEISIGDTVRLIADIIGVNIEIECDEQRL------RPANSEVERLCCDN 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 S IKS G+ P+ +++ GL T+ W Sbjct: 285 SLIKSLTGFSPRYSLKDGLQATIEW 309 >gi|34499490|ref|NP_903705.1| nucleotide sugar dehydratase [Chromobacterium violaceum ATCC 12472] gi|34105340|gb|AAQ61695.1| probable nucleotide sugar dehydratase [Chromobacterium violaceum ATCC 12472] Length = 307 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 26/259 (10%) Query: 75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTD 134 D + + AA + S + D ++ TN+ GT + C + R + ST Sbjct: 54 DTVYHLAALIAIPYSYVAPDSYVDTNVKGTLNI---------CQAALDNGVSRVIHTSTS 104 Query: 135 EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP 194 EVYG+ E P P SPYSA+K +D + +++ + + +P+ ++ N YGP Sbjct: 105 EVYGTAQYVPIDEKHPLQPQSPYSASKIGADAMAMSFYNAFDLPLTIARPFNTYGPRQSA 164 Query: 195 EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKGRIGERYNIGGNNE 253 +IP I+++ G GD RD+ YVED R L L + IGE NIG N E Sbjct: 165 RAVIPTIISQIANGKKQIKLGDVTPTRDFNYVEDTCRGFLALANCEQAIGETINIGSNYE 224 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRRYAI--DSSKIKSEIGW 307 D + I L+++ + F+ D RP + + D+ KI G+ Sbjct: 225 ISVGDTLNLIRELMNS----------DVEFLTDEQRIRPEKSEVFRLWCDNRKINQLTGF 274 Query: 308 FPQENMESGLNKTVCWYLD 326 PQ ++ SGL KT+ W+ + Sbjct: 275 MPQHDIRSGLAKTIEWFTN 293 >gi|78779696|ref|YP_397808.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9312] gi|78713195|gb|ABB50372.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9312] Length = 355 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 46/360 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN-------LNSLKEISQSNLFSFL 55 ++VTG AGFIG AL L+ + +I ++ ID L N + L + ++ L+ FL Sbjct: 10 ILVTGAAGFIGYALAERLLKEGEINIIGIDNLNSYYNPALKKRRIEILNQKDENRLWHFL 69 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +VD+ D+ + +++ P +VN AA++ V S+ D ++ +N++G +LE R + Sbjct: 70 KVDLKDKNKVNEIFEKYNPHLVVNLAAQAGVRYSLENPDTYLESNLLGFLNILEGCRNF- 128 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + + S+ VYG +SED + P S Y+ATK S++ L ++ H Sbjct: 129 --------NVEHLIYASSSSVYGGNIIMPYSEDHSVDHPLSLYAATKKSNEMLAHSYSHL 180 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGPY P+ + ++ + ++ +G RD+ ++ D V A+Y Sbjct: 181 FKIPSTGLRFFTVYGPYGRPDMAPMIFADSILNRKPINVFNNGDMSRDFTFISDIVEAIY 240 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 K I + +N+G NN I+++ I L D L S Sbjct: 241 KCCLKKPISNKSFYDHRPEPSTSFAPHRIFNVGSNNP---INLMSFIEKLEDEL---GIS 294 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD---NNWWWRP 333 + +R ++ PG + D +K+ I + P + G++ WY D ++++ +P Sbjct: 295 AIKKMRPMQ--PGDVKSTFADITKLSEWINYHPSTSFNKGIHLFAKWYKDYFKSDYYRKP 352 >gi|53714725|ref|YP_100717.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] gi|60682729|ref|YP_212873.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis NCTC 9343] gi|253565229|ref|ZP_04842685.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265765813|ref|ZP_06093854.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52217590|dbj|BAD50183.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] gi|60494163|emb|CAH08955.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis NCTC 9343] gi|251946694|gb|EES87071.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263253481|gb|EEZ24946.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301164205|emb|CBW23763.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis 638R] Length = 336 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTY--AGNLNSLKEISQSN 50 M+ +VTG AGFIGS + LV +V+ +D +L Y + KE + + Sbjct: 1 MKALVTGAAGFIGSYTVKALVAQ-GCEVVGLDNINSYYDVQLKYDRLADTGITKESIEKD 59 Query: 51 L---------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + + F+++D+ DRE + + K+ D +VN AA++ V SI +I +NI Sbjct: 60 ILLPSAKYPSYRFIKMDLTDREGLTNLFKDEHFDIVVNLAAQAGVRYSIENPYAYIESNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 +G LLE R + + S+ +YG DK ++E D +P S Y+AT Sbjct: 120 VGFLNLLECCRHYPVN---------HLVYASSSSIYGLNDKVPYAETDKADSPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ Y IP YGP+ P+ L + ++ G + ++ +GQ Sbjct: 171 KKSNELMAHAYSKLYSIPTTGVRFFTVYGPWGRPDMAPCLFMKAILNGDPIKVFNNGQMR 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+ Y++D + L ++ YNIG + + +D + ++I K+ Sbjct: 231 RDFTYIDDIIAGLMKIIAHPSADPIPFYIYNIGNSAPVELMDFI--------SVIEKTAG 282 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 T + + + +PG D+ +++ + G+ P ++E G+ K WY+ Sbjct: 283 KTAIKQMMGMQPGDVVCTYADTGRLEKDFGYKPSTSIEEGIQKFYDWYV 331 >gi|325107112|ref|YP_004268180.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] gi|324967380|gb|ADY58158.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] Length = 322 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 160/343 (46%), Gaps = 47/343 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+++VTGGAGFIGS ++V+ L+ +V+D L+ N E++ +V Sbjct: 1 MKVLVTGGAGFIGS----HIVDALQAAGHTAVVLDNLSTGRKENLPDEVT------LHEV 50 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DIC R+ +R L++ +PDA+ + AA+ V RS+ NI+G +LE Sbjct: 51 DICQRDAVRKVLEQERPDAVCHQAAQMSVGRSVQEPSFDAEVNILGFLNVLE-------A 103 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + F S +YG + + E P NP SPY +K + + + + +G+ Sbjct: 104 AAETGVKRIVFAS-SGGVLYGDVTEPQ-PETYPANPISPYGISKWAGERYLRFFTAEHGL 161 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + SN YGP P ++ + RM+ G + GDG+ +RD++YV D RA + Sbjct: 162 ETVALRYSNVYGPRQNPHGEAGVVAIFCQRMLAGEATRINGDGKYIRDYVYVTDVARANF 221 Query: 235 LVLKKGRIGER--YNIGGN-----NERKNIDIVF------EIGFLLDALIPKSYSHTELI 281 L L + + +N+G NE F + G +D +PKS Sbjct: 222 LALTQTLPEQHIAFNVGTGIGLDVNELSEKLHQFAGEQLKQAGQSID--VPKS------- 272 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + RPG R +D+ ++ W + +++ GL++TV W+ Sbjct: 273 TYGPARPGDLRSNLVDAGLLQRTWDWQAKTSLDEGLDETVRWF 315 >gi|325284119|ref|YP_004256660.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] gi|324315928|gb|ADY27043.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] Length = 331 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 155/333 (46%), Gaps = 49/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L+ +V V D NL+S + + Q D+ Sbjct: 1 MTILVTGGAGYIGSHTVRALLK-AGYEVAVFD------NLSSGHAAALPHGVRLFQADLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + AL E Q +AI++FAA V S+ + N++G+ LL+E Q Sbjct: 54 NPDAVMQALAETQAEAIIHFAARIEVGESMREPLGYYRNNVLGSLNLLQEI--------Q 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + + + ST VYG+ D ED P P S Y TK ++ ++ A +G P Sbjct: 106 NTGRRIPLVFSSTAAVYGTTDAVPIPEDAPLRPESVYGETKLMTEQMIRAAHAAHGQPYT 165 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLA-ITRMIEGSHVFLYG------DGQNVRDWL 224 V ++ + G H + LI LA +T + + + + ++G DG +RD++ Sbjct: 166 VLRYFNVCGASPEGDIGEAHASQTHLIELACMTALGKRAKMMVFGDDYPTPDGTCLRDYI 225 Query: 225 YVEDHVRALYLVLKK---GRIG-ERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSH 277 +V+D A L LK GR G YN+G G + R+ +D+V + + +P+ + Sbjct: 226 HVQDLAGAHVLALKALLDGRHGAATYNVGLGRGFSVREVLDMVDRV---VGTRLPREIA- 281 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 E R G R D ++I+ E+G+ PQ Sbjct: 282 -------ERRAGDPPRLVADGTRIREELGFTPQ 307 >gi|321313450|ref|YP_004205737.1| UDP-glucose 4-epimerase [Bacillus subtilis BSn5] gi|320019724|gb|ADV94710.1| UDP-glucose 4-epimerase [Bacillus subtilis BSn5] Length = 340 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ +L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKDL-TFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDAVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 + +K + + S+ VYG + +ED P ++PY TK + ++ HT Sbjct: 110 AMEKFGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDL-HTADNE 168 Query: 178 -PVLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 V L N +G P P L+P +A + + + ++G DG Sbjct: 169 WSVALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLNVFGNDYPTKDGTG 228 Query: 220 VRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V E HV+AL VL + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RF + RPG D +K K E+GW + +E +C ++W W+ Sbjct: 285 -----YRFADRRPGDIATCFADPAKAKRELGWEAKRGLEE-----MCA---DSWRWQ 328 >gi|315178447|gb|ADT85361.1| nucleotide sugar epimerase [Vibrio furnissii NCTC 11218] Length = 336 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 160/352 (45%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIGSA+ +L ++ +V+ ID N+N +IS Q L Sbjct: 1 MKYLVTGAAGFIGSAVVEHLT-EMGHEVVGID------NINDYYDISLKHARLDRIQHPL 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F+++DI DRE I Q D +++ AA++ V SI + +N++G +LE Sbjct: 54 FKFIKMDIADREAIPELFANEQFDRVIHLAAQAGVRYSIDNPLAYADSNLVGHLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS D + P S Y+ATK S++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNGKVPFSTDDSVDHPISLYAATKKSNELMSHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y IP YGP+ P+ + ++++G + +Y +G RD+ Y++D V Sbjct: 165 YSHLYNIPTTGLRFFTVYGPWGRPDMALFKFTNKIVKGETIDIYNNGDMRRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + +++G YNIG N K +D I L D+L Sbjct: 225 EGIIRIQNVIPEKNSEWTVEEGSPATSSAPYRVYNIGNGNPVKLMDY---IQALEDSLGI 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + F+ +PG + D++ + G+ P+ ++ G+ V WY Sbjct: 282 EAKKN-----FMPMQPGDVYQTYADTTSLFEATGYKPEVDVRKGVTAFVEWY 328 >gi|83309207|ref|YP_419471.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] gi|82944048|dbj|BAE48912.1| Nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] Length = 333 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 149/330 (45%), Gaps = 29/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L LV+ + V V+D + G +L E + L I D Sbjct: 4 RILVTGGAGFIGSHLVDLLVSQGQ-AVTVLDDFS-TGEAANLAEAGGAGDVRVLTGTILD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + +A++ D + + A + V +S+ E N GT LLEE R Sbjct: 62 RDAVAAAMEGC--DRVFHLAVQC-VRKSLGQPIENHDVNATGTLYLLEEAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ RF+ S+ EVYG+ L +ED P + Y A K + + A+ TYG+P + Sbjct: 110 KRQVSRFVYCSSSEVYGNGRDSLLNEDRTVCEPVTVYGAAKLAGELYAKAYHRTYGLPTV 169 Query: 181 LSNCSNNYGPY-HFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N+YGP H+ ++IP + R++ G ++GDG RD+ YV + R L + Sbjct: 170 VVRPFNSYGPREHYKGQRAEVIPRFLIRVLNGLPPTIFGDGSAGRDFTYVTETARGLAMA 229 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRY 294 + +G NI ++ I L I SY RPG + Sbjct: 230 AQCDALVGREINIAYGRMVTVKEVAESITRLCQRPDIAPSYG--------PGRPGDVKAL 281 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ +S +G+ + E GL + W+ Sbjct: 282 HADTALARSLLGFKAEIGFEQGLETYIDWF 311 >gi|296329802|ref|ZP_06872286.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|296152841|gb|EFG93706.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 339 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 62/361 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ +L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKDL-TFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + S E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 +K + + S+ VYG + +ED P ++PY TK A +++ Sbjct: 110 VMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLYTADNEW 169 Query: 167 LV--LAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------ 215 V L + + +G ++ S G P P L+P +A + + + ++G Sbjct: 170 SVALLRYFNPFG-----AHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTK 224 Query: 216 DGQNVRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V E HV+AL VL + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 P RF + RPG D +K K E+GW + +E +C ++W W Sbjct: 284 P--------YRFADRRPGDIATCFADPAKAKRELGWEAKRGLEE-----MCA---DSWRW 327 Query: 332 R 332 + Sbjct: 328 Q 328 >gi|254415694|ref|ZP_05029452.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] gi|196177400|gb|EDX72406.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] Length = 332 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/340 (27%), Positives = 154/340 (45%), Gaps = 33/340 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--------NLNSLKEISQSNLF 52 M+ ++TGG GF+G+ L + L + + V+D L + LK+ S Sbjct: 1 MKWLITGGCGFLGTNLIKKLYTEGNPHIRVVDNLCVGTREALAAVCDFVELKDAGLSGHP 60 Query: 53 SFLQV------DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI 106 S L DI D + + D IV+ AA + V SI TN+IGT Sbjct: 61 SSLSGTELVIGDILDSQLALRVTRGI--DVIVHLAANTGVQPSIQDPHGDCYTNVIGTLN 118 Query: 107 LLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDY 166 LE R +Q K RF+ S+ G + E P+ P SPY A+K + + Sbjct: 119 YLEAARH-----NQVK----RFIFASSGAPIGKCIPPIHEELAPH-PVSPYGASKLAGEG 168 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYH-FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 A+ H++G+ ++ N YGP ++ I + + G + +YGDG+ RD+++ Sbjct: 169 YCCAYFHSFGVETVVLRFGNVYGPASGHKNSVVAKFIRQALNGETLEIYGDGRQTRDFIF 228 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++D VRA+ L I GE + I N E ++V ++ +++ + K S+ + Sbjct: 229 IDDLVRAICLAAATDNIGGEVFQIATNRETTVRELVDKLSWVMSEMGIKLESN-----YA 283 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G RR D+SK K +GW + ++ GL +TV W+ Sbjct: 284 SPLIGDVRRNFSDTSKAKEMLGWQAEVELKDGLRRTVEWF 323 >gi|220917113|ref|YP_002492417.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954967|gb|ACL65351.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 310 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ----VLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 R+++TGGAGFIGS + DL +Q V V+D +L+S K + F V Sbjct: 4 RILITGGAGFIGSTIA-----DLFVQAGWDVAVLD------DLSSGKRENVPQGARFYPV 52 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ + KE +P I + AA+ V RS+ N+ G L++ S Sbjct: 53 DVRSAAAAEAVRKE-RPQVICHHAAQIDVRRSMADPRFDADVNVGGLLNLMQAAAAAGSV 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + S YG E P P S Y A KA+S+ + + GI Sbjct: 112 -------EHVLFASSGGATYGDTAVIPTPETHPQAPVSHYGAAKAASELYLGVYRAALGI 164 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 PV +N YGP P ++ + R++EG +YGDG RD+++V D RA Sbjct: 165 PVAALRYANVYGPRQDPHGEAGVVAIFCGRLLEGRPCTVYGDGGQTRDYVFVGDVARANL 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L ++ G N+G E +++ ++ A + ++ RPG RR Sbjct: 225 LAAERRHDGP-LNVGTGVE-TDVNALY-------AHLARAAGVDRPAEHAPARPGEQRRS 275 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ID S IGW P+ + GL +T+ W+ Sbjct: 276 CIDPSLAARAIGWRPEVPLADGLARTLEWF 305 >gi|228993934|ref|ZP_04153836.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] gi|228765732|gb|EEM14384.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] Length = 330 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + LV++ + V+V+D NL + E + + F + D+ D+ Sbjct: 4 ILVCGGAGYIGSHAVKKLVDEGQ-SVIVVD------NLQTGHEDAIAEGVKFYKGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L SE+ P NP++ Y TK + + ++ + + Sbjct: 110 IDKFIFS--STAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +D V A +L LK G + YN+G N +IV + + + IP + Sbjct: 228 DDLVAAHFLGLKDLQNGGDSDFYNLGNGNGFSVKEIVEAVREVTNHEIPAEVA------- 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 281 -PRRAGDPARLVASSQKAKEKLGWSPQ 306 >gi|197118070|ref|YP_002138497.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter bemidjiensis Bem] gi|197087430|gb|ACH38701.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter bemidjiensis Bem] Length = 684 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 102/355 (28%), Positives = 155/355 (43%), Gaps = 51/355 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ L ++LV + +V++ D L+ AG +L + N LQV I D Sbjct: 327 VLVTGGAGFIGTNLVQHLVAQGE-RVILYDNLSRAGVEKNLLWL-MDNCGERLQVVIGDT 384 Query: 63 E---CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + A+ E + + +FAA+ V SI N+ GTF LLE R Sbjct: 385 RNSLLLEQAVSEAK--QVFHFAAQVAVSSSIDNPANDFAINVQGTFSLLEAIR------- 435 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPS------------------SPYSAT 160 K L ST++VYG+++ G+ + Y P SPY + Sbjct: 436 -KAKTPPSLLYTSTNKVYGAIEGCGVRKNGVRYEPLDPQLRSHGLGEGTTLDFLSPYGCS 494 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGD 216 K +D VL + ++GI + S YGP+ + + + AI M +G + LYGD Sbjct: 495 KGCADQYVLDYARSFGIDAAVFRMSCIYGPHQYGTEEQGWVAHFAIQTM-KGEPITLYGD 553 Query: 217 GQNVRDWLYVEDHVRALYLV--LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G +RD L+VED V A+ + G+ +NIGG R + L Sbjct: 554 GCQIRDLLFVEDLVDAMCRARDIMPRIAGQAFNIGGGPARTISLLE--------LLDLLR 605 Query: 275 YSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 H L + D R G R Y D+ K GW P+ ++ G+ + W L+ Sbjct: 606 DLHGTLPTILRDDWRTGDQRYYVSDTRKFCKATGWTPRHSVAEGVRRLYDWLLET 660 >gi|116621368|ref|YP_823524.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116224530|gb|ABJ83239.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 326 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 39/335 (11%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVID-----KLTYAGNLNSLKEISQSNLFSFLQ 56 ++VTG G +GS L R L++ + LV D +L +G L+ +K ++ Sbjct: 10 VLVTGATGLVGSWLTRRLLDAGADVVCLVRDWVPQSELVRSGTLDRVK---------VVR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + + + E++ +++ AA++ V + +NI GT+ LLE R Sbjct: 61 GDIRDLDALERTIGEYETGTVIHLAAQTIVGIANRNPISTFESNIQGTWNLLEACR---- 116 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + I S+D+ YG +K +SED P PY +K+ +D + + +Y Sbjct: 117 -----RAPLVKSIVIASSDKAYGDQEKLPYSEDAPLQGQHPYDVSKSCADLISQTYAKSY 171 Query: 176 GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+PV ++ C N YG +++P I ++ G + DGQ +RD+ YVED A Sbjct: 172 GLPVAVTRCGNFYGGGDLNWNRIVPGTIRSILRGERPVIRSDGQFIRDYFYVEDGAAAYM 231 Query: 235 LVL-----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L+ + G +N + +D+V I + + + + E + I Sbjct: 232 LLAELLHSRPELRGCAFNFSNEIQVTALDLVRRILCAMGSTLQPDVRN-EAVNEI----- 285 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + + + K+ + W P +E GL T+ WY Sbjct: 286 --RHQYLTAERAKTMLNWSPLFTLEQGLQHTIAWY 318 >gi|320160985|ref|YP_004174209.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] gi|319994838|dbj|BAJ63609.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] Length = 308 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 157/327 (48%), Gaps = 30/327 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + + + V+V+D NL++ +E + + F +VDI Sbjct: 1 MKILVTGGAGFIGSHVVDQFI-EAGHDVVVVD------NLSTGREKNLNPKARFYRVDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R + +P+ + + AA+ +V RS+ N+ G+ LLE R + Sbjct: 54 DPE-LRKVFEIEKPEVVDHHAAQMNVRRSVADPLYDADVNVRGSVHLLELCREYGV---- 108 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + IS+ VYG E+ P P PY TK + + + + YGI Sbjct: 109 -----RKIIYISSGGAVYGEPVYLPCDEEHPVRPLCPYGLTKYAFELYLYIYQQNYGIDY 163 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P +I + +M+ G V +YG G VRD+++V D RA L Sbjct: 164 TVFRYPNVYGPRQDPLGEAGVIAIFTGQMLRGEPVTIYGTGDQVRDYVHVYDCARANLLA 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G G YN+ G+ + ++ +F+ L A+ ++ + + + G + + Sbjct: 224 LESGS-GRVYNL-GSGKGTTVNELFQ---RLKAIT----GYSGMPNYAPAKLGETFKIYL 274 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ + K E+GW P ++E GL TV + Sbjct: 275 NAQRAKEELGWVPTISLEEGLRNTVEY 301 >gi|303246819|ref|ZP_07333096.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] gi|302491836|gb|EFL51716.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] Length = 335 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG LCR ++ + V +D ++ A + + ++ F F + Sbjct: 1 MNILVTGAAGFIGFHLCRRFLS-MGHTVTGLDNMSPYYSVALKQDRIDILAAEKQFRFAK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR+ + E + +VN AA++ V S+ D +I TN++G F +LE R Sbjct: 60 ADMADRQAMDRLFDEGKFSHVVNLAAQAGVRHSLTHPDAYIQTNLLGYFNILENCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q K D F F S+ VYG FS D +P S Y+A+K S++ + ++ + Y Sbjct: 116 ---QHKVDHFVF--ASSSSVYGLNTTMPFSVHDNVDHPISLYAASKKSNELMAHSYSYLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++E + ++ G+ RD+ Y++D V + Sbjct: 171 GLPCTGLRFFTVYGPWGRPDMALFLFTKAILEDKPIQVFNHGRMERDFTYIDDIVEGVVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V + YNIG NN ++ ++ I + DAL K+ Sbjct: 231 VTQNTATPNPDWNPASPDPGSSVAPYRLYNIGNNN---SVSLMRFIETIEDALGKKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + + ++G+ P +E+G+ + + WY Sbjct: 285 --IKEMLPLQPGDVPATYANVDDLIRDVGFKPSTPIETGIARFIEWY 329 >gi|294791627|ref|ZP_06756775.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|294456857|gb|EFG25219.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 307 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS L L+ +L VLVID L+ G + + E ++ F+++D+ Sbjct: 1 MNICVTGGAGFIGSHLVDRLI-ELGHDVLVIDDLS-TGMRSFVHEDAR-----FIEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S +EF+P + + AA++ V S+ N+IG +L+ R Sbjct: 54 DPKLL-SVFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +FL S+ VYG L +ED+ PSS Y TK +++ + + +G+ + Sbjct: 105 -KVKVEQFLMPSSAAVYGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTV 163 Query: 181 LSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP +I + ++EG + ++GDG+ RD++YV+D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIE-DRPGHDRRY 294 + G+ YN+ N +G ++ LI ++ S T+ + + E +R G + Sbjct: 224 ENGQCTGIYNVSTN-----------MGTSVNELITRFRAISGTDFMVYYENERIGDIKHS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + G+ +E+GL KT+ ++ Sbjct: 273 RLSNVKAERDFGFIATTTLEAGLQKTLEYF 302 >gi|294793511|ref|ZP_06758648.1| capsular polysaccharide biosynthesis protein I [Veillonella sp. 3_1_44] gi|294455081|gb|EFG23453.1| capsular polysaccharide biosynthesis protein I [Veillonella sp. 3_1_44] Length = 365 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-------YAGNLNSLKEISQ--SNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + L + E+S+ N++ Sbjct: 13 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKEYRLQQIDELSKDNKNIW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+ + ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 IFKKGNIADKSFVDEIFAIYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + ++ + S+ VYG+ + +S +D NP S Y+ATK S++ L ++ Sbjct: 133 HSY---DDGERGVEHLVYASSSSVYGANKQIPYSTDDKVDNPVSLYAATKKSNELLAYSY 189 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 190 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRNGGTIKIFNYGNCKRDFTYIDDIVE 249 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG +N +D V + + ++ + Y+ Sbjct: 250 GVSKVMSTAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSSGVLSEDYNF 309 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG D+S ++++ G+ P + GL + WY D Sbjct: 310 EEHKELVPMQPGDVPVTYADTSALEADFGFKPNTTLREGLKRFAIWYKD 358 >gi|227829920|ref|YP_002831699.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|229582832|ref|YP_002841231.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|227456367|gb|ACP35054.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|228013548|gb|ACP49309.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|323476601|gb|ADX81839.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus HVE10/4] Length = 307 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 50/338 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +++GGAGF+GS L L N+ +I + +D L+ + K + Sbjct: 1 MKFLISGGAGFLGSHLIENLANEHEITI--VDDLSTTKYIQLPKNV-------------- 44 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + I+ ++ F+ D I++ AA + + E + +N IGT W+ Sbjct: 45 --KLIKDKIENFKTNEKFDYILHLAARPSPEDYMNNPIETLLSNSIGT----------WN 92 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAW 171 L +K F+ S+ E+YG+ + E+ P S Y K S+ L +A+ Sbjct: 93 ALEIARKSDAIFMYTSSSEIYGNAEVLPIPEEYWGKVNPIGVRSCYDEGKRFSEALTMAY 152 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 YG+ V + N YGP + ++I I + + G + ++GDG+ R +LYV Sbjct: 153 YREYGLDVRIQRPFNVYGPRLREDGNYGRVISRFIYQALRGEDITVFGDGKQTRAFLYVT 212 Query: 228 DHVRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D V A L+ KG G NIG + E K I+ L +I + I+F+ Sbjct: 213 DWVEATKKLLFSKGIKGIVLNIGSDKEVKIIE--------LARMIINLTNSKSNIKFLPP 264 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP R A D +K K + W P+ ++E GL KT+ W+ Sbjct: 265 RPDDPSRRAADITKAKKLLNWEPKVSLEEGLRKTIDWF 302 >gi|170747736|ref|YP_001753996.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170654258|gb|ACB23313.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 335 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 37/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++V GGAGFIGS L L+ D +V +D L G +L ++ F F++ D+ Sbjct: 8 IRVLVAGGAGFIGSHLIDALLAD-GARVTCVDSL-LTGRRANLAHLANEARFDFVEADVT 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + AL F D + N A + + T+++GT LLE R + Sbjct: 66 E---PLPALPRF--DWVFNLACAASPPHYQADPVHTMMTSVLGTGRLLEVARDAGA---- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 RFLQ ST EVYG ++ E P P + Y K S++ L + + Sbjct: 117 ------RFLQASTSEVYGDPERHPQQESYWGNVNPTGPRACYDEGKRSAETLTFDFERQH 170 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + ++ N YGP + +++ I + + G + +YG+G+ R + YV D V L Sbjct: 171 GLDIRVARIFNTYGPRMRADDGRVVSNVICQALAGDDITVYGNGEQTRSFCYVSDLVDGL 230 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L+ + + N+G E +G L+D ++ + + + ++R D P Sbjct: 231 LRLMAAETPLAGPVNLGNPRE-------LTVGALVDLVVRMTETPSRIVRRPLPVDDP-- 281 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ ++ +GW P+ +E GL T+ W+ Sbjct: 282 -QRRRPDITRAETLLGWSPRVPLEEGLEATIAWF 314 >gi|327192482|gb|EGE59436.1| putative nucleoside diphosphate epimerase protein [Rhizobium etli CNPAF512] Length = 680 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 45/364 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++VTGG+GF+G L L+ND + V+++D L +G NL+ L E + L D+ Sbjct: 331 IVVTGGSGFVGCNLADNLLNDGE-DVVILDSLARSGVDQNLSWLIERHGERVHPVL-ADV 388 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I +A + + A+ ++AA++ V S++ E TN GT +LE R Sbjct: 389 RDLMGIEAAFCDAK--AVFHYAAQTAVTTSLVDPLEDFETNARGTLNVLEAVR------K 440 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLF------------------SEDMPYNPSSPYSAT 160 ++ F ST++VYG+LD G+ ED P + +PY + Sbjct: 441 AGRRAPVIF--ASTNKVYGALDDLGMIELDDRYLPESEIVREQGIGEDRPLDFCTPYGCS 498 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D +L + ++GIP + S YGP F + + + R + G + +YGDG Sbjct: 499 KGVADQYILDYAKSFGIPAAVLRMSCIYGPRQFGTEDQGWVAHFLIRALGGEAISIYGDG 558 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + VRD L+V D V A +L R+ G +N+GG +N V + ++ L + Sbjct: 559 KQVRDILHVNDAVAAYRSLLANIDRVSGNAFNLGGGP--RNAVSVLGVLRAIEELTERPV 616 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + + F R G + ++ K++ E GW + GL W + N + R + Sbjct: 617 ATS----FGPWRAGDQFYFVANTQKLERETGWEARIGWRDGLRHLAEWLIVNRFGARQIP 672 Query: 336 KELK 339 +E + Sbjct: 673 REKR 676 >gi|310643727|ref|YP_003948485.1| nad dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] gi|309248677|gb|ADO58244.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] Length = 309 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 118/235 (50%), Gaps = 20/235 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L R L D I+V V+D LT GN ++ + ++ DI Sbjct: 1 MKALVTGGAGFIGSQLVRALA-DSGIRVHVLDNLT-TGNAANVDPRAVMHI-----ADIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E R+ L PD + + AA++ V SI DE N++GT LL+ R Sbjct: 54 SSEA-RTLLIRESPDIVFHLAAQADVQHSIHHPDEDADVNVLGTIHLLQACR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + ST VYG L K ED P P S Y +K +++ + + YG+ Sbjct: 105 -EAGVSKIIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + N YGP + ++ + + R+ +GS + ++GDG RD++YV+D VRA Sbjct: 164 ILRYGNVYGPGQAAKGEGGVVAIFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRA 218 >gi|310827385|ref|YP_003959742.1| UDP-glucuronate 5'-epimerase [Eubacterium limosum KIST612] gi|308739119|gb|ADO36779.1| UDP-glucuronate 5'-epimerase [Eubacterium limosum KIST612] Length = 350 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 34/345 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLT-------YAGNLNSLKEISQSNLFSF 54 +++TG AGFIGS L L+ + + ++ ID + A L ++ + S ++F Sbjct: 11 ILITGAAGFIGSNLVIELLRTVPSVSIIGIDNMNDYYDVSIKAWRLEQIEALGGS--WTF 68 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ +I D+E I + ++++P+ +VN AA++ V SI D +I +N+IG + +LE R + Sbjct: 69 VRGNIADKELIVNLFEKYKPEIVVNLAAQAGVRYSITNPDVYIESNLIGFYNILEACRHY 128 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 + S+ VYG K +S ED NP S Y+ATK S++ + A+ Sbjct: 129 ---------PVEHLVYASSSSVYGVNKKVPYSTEDKVDNPVSLYAATKKSNELMAHAYSK 179 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP YGP P+ ++ G + ++ G +RD+ Y++D V + Sbjct: 180 LYNIPSTGLRFFTVYGPAGRPDMAYFSFTNKLRAGETIKIFNYGNCLRDFTYIDDIVEGV 239 Query: 234 YLVLKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTE 279 V++ + GE YNIG + +D V + + ++P Y+ Sbjct: 240 KRVIQGAPDKKTGEDGLPIPPYAVYNIGNSKPENLLDFVQILSEELVKAEVLPDDYNFEN 299 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+S+++S + P ++ +GL + WY Sbjct: 300 HKELVAMQPGDVTVTYADTSELESTFEFKPNTDLRTGLRRFAEWY 344 >gi|153954716|ref|YP_001395481.1| CapI [Clostridium kluyveri DSM 555] gi|219855180|ref|YP_002472302.1| hypothetical protein CKR_1837 [Clostridium kluyveri NBRC 12016] gi|146347574|gb|EDK34110.1| CapI [Clostridium kluyveri DSM 555] gi|219568904|dbj|BAH06888.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 318 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 155/329 (47%), Gaps = 23/329 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN----LNSLKEISQSNLFSFLQVD 58 ++VTGGAGFIGS +C L+ DL +V+ +D N ++++ +S+ ++ + D Sbjct: 4 ILVTGGAGFIGSNICDKLL-DLNYRVVNLDNFNSYYNPKIKEKNIEKALKSDKYTLYRGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +++ + + E + +++ AA + V S+ E++ +I GT LL+ C+ Sbjct: 63 ILNKDLLNNIFDENNVELVIHLAAMAGVRNSLKDPLEYVDVDIKGTVNLLQ------ICV 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K +F+ S+ VYG K FSE D SPY+A K +++ + + I Sbjct: 117 ERGVK---KFINASSSSVYGINHKIPFSEEDNVELQISPYAAAKRAAELFCSTYTRLHDI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + YGP PE I + + EG + ++GDG + RD+ Y++D V + ++ Sbjct: 174 NIACLRFFTVYGPRQRPEMAIHMFTKSIYEGKSINMFGDGSSKRDYTYIDDVVDGIVSLI 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K E +N G + +D++ I ++ +I + + G D Sbjct: 234 DKDFKFEVFNFGNSQTISLLDLIKTIENIV--------GKKAIINRVRIQKGDVPVTYAD 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 SK K IG+ P N++ G+ K WY D Sbjct: 286 ISKAKKFIGYNPMVNIKQGIKKFYDWYCD 314 >gi|15789399|ref|NP_279223.1| GDP-D-mannose dehydratase [Halobacterium sp. NRC-1] gi|169235111|ref|YP_001688311.1| nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase) [Halobacterium salinarum R1] gi|10579719|gb|AAG18703.1| GDP-D-mannose dehydratase [Halobacterium sp. NRC-1] gi|167726177|emb|CAP12950.1| nucleoside-diphosphate-sugar epimerase (homolog to dTDP-glucose 4,6-dehydratase) [Halobacterium salinarum R1] Length = 309 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 29/327 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG AGFIGS L L+ D V +D G+ +L+ + + FSF + DI D + Sbjct: 5 LVTGVAGFIGSHLAAALL-DRGYDVRGVDNFA-TGHDQNLEPLRGTGDFSFYEADIRDAD 62 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWSCLSQD 121 + D + + AA+S V RS+ D TT++ GT +++ R Sbjct: 63 LVADVTNGV--DYVFHQAADSSVPRSV--EDPVTTTDVNCTGTATVIDAAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + D + S+ +YGS + E M P SPY+ +K ++ L L Y I Sbjct: 110 EADVDTVVVASSAAIYGSTETFPKVESMTEQPESPYALSKHYTEKLALQASELYDIDTAA 169 Query: 182 SNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P +IP I+ M++G +YGDG+ RD+ ++++ ++A Sbjct: 170 LRYFNIYGPRQDPNGDYAAVIPKFISLMLDGERPVIYGDGEQSRDFTFIDNAIQANIRAA 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + GE +N+G ++V + LLD I Y + RPG R D Sbjct: 230 EGDVTGEAFNVGCGGRVTVNELVDVLNDLLDTDIDPIYD--------DPRPGDVRHSHAD 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 SK + + + P+ GL +T+ +Y Sbjct: 282 ISKARELLSYEPEVGFSEGLEQTIPYY 308 >gi|311070404|ref|YP_003975327.1| UDP-glucose 4-epimerase [Bacillus atrophaeus 1942] gi|310870921|gb|ADP34396.1| UDP-glucose 4-epimerase [Bacillus atrophaeus 1942] Length = 340 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKEL-TFYKAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + S E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 +K + + S+ VYG + +ED P ++PY TK + ++ HT Sbjct: 110 VMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDL-HTADNE 168 Query: 178 -PVLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 V L N +G P P L+P +A + + + ++G DG Sbjct: 169 WSVALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTG 228 Query: 220 VRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V E HV+AL VL + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RF + RPG D +K K E+GW + +E +C ++W W+ Sbjct: 285 -----YRFADRRPGDIATCFADPAKAKRELGWEAKRGLEE-----MCA---DSWRWQ 328 >gi|190894632|ref|YP_001984925.1| putative nucleoside diphosphate epimerase [Rhizobium etli CIAT 652] gi|190700293|gb|ACE94375.1| probable nucleoside diphosphate epimerase protein [Rhizobium etli CIAT 652] Length = 680 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 45/364 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++VTGG+GF+G L L+ND + V+++D L +G NL+ L E + L D+ Sbjct: 331 IVVTGGSGFVGCNLADNLLNDGE-DVVILDSLARSGVDQNLSWLIERHGERVHPVL-ADV 388 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I +A + + A+ ++AA++ V S++ E TN GT +LE R Sbjct: 389 RDLMGIEAAFCDAK--AVFHYAAQTAVTTSLVDPLEDFETNARGTLNVLEAVR------K 440 Query: 120 QDKKDQFRFLQISTDEVYGSLDK-GLF------------------SEDMPYNPSSPYSAT 160 ++ F ST++VYG+LD G+ ED P + +PY + Sbjct: 441 AGRRAPVIF--ASTNKVYGALDDLGMIELDDRYLPESEIVREQGIGEDRPLDFCTPYGCS 498 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D +L + ++GIP + S YGP F + + + R + G + +YGDG Sbjct: 499 KGVADQYILDYAKSFGIPAAVLRMSCIYGPRQFGTEDQGWVAHFLIRALGGEPISIYGDG 558 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + VRD L+V D V A +L R+ G +N+GG +N V + ++ L + Sbjct: 559 KQVRDILHVNDAVAAYRSLLANIDRVSGNAFNLGGGP--RNAVSVLGVLRAIEELTERPV 616 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + + F R G + ++ K++ E GW + GL W + N + R + Sbjct: 617 ATS----FGPWRAGDQFYFVANTQKLERETGWEARIGWRDGLRHLAEWLIVNRFGGRQIP 672 Query: 336 KELK 339 +E + Sbjct: 673 REKR 676 >gi|300774404|ref|ZP_07084267.1| NAD-dependent epimerase/dehydratase [Chryseobacterium gleum ATCC 35910] gi|300506219|gb|EFK37354.1| NAD-dependent epimerase/dehydratase [Chryseobacterium gleum ATCC 35910] Length = 342 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/355 (27%), Positives = 155/355 (43%), Gaps = 47/355 (13%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKI------------QVLVIDKLTYAGNLNS----- 42 M +VTGG+GFIGS L R L N + QV + + L G ++ Sbjct: 1 MVYLVTGGSGFIGSHLTERLLRNGHSVINIDNFDDFYDYQVKIKNTLESIGKISDFEFSD 60 Query: 43 -------LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE 95 L +S S+ +S DI D + + + K D +++ AA + V SI E Sbjct: 61 KETDIRRLVSLSHSDQYSLYWQDIRDYKGLEAIFKNHHIDMVIHLAALAGVRPSIERPLE 120 Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS 154 + N+ GT LW C K +F+ S+ VYG+ +K F+E D NP Sbjct: 121 YEEVNVRGTM------NLWELCKEHQIK---KFICASSSSVYGNNEKIPFAETDNVDNPI 171 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 SPY+ATK S + + + + Y I ++ YGP P+ I + E + Y Sbjct: 172 SPYAATKKSGEVIGHVYHNLYHIDMIQLRFFTVYGPRQRPDLAIHKFTKLISENQEIPFY 231 Query: 215 GDGQNVRDWLYVEDHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 GDG RD+ Y++D + +++ + + E N+G N ++V I L+ Sbjct: 232 GDGNTARDYTYIDDIIDGITKSILYLENNTEVYEILNLGENQVVTLSEMVATIEMALEKS 291 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 K +F+ +PG + D +K K IG+ P + ++G+ K V W+L Sbjct: 292 ATK--------KFLPMQPGDVTKTNADITKAKELIGYKPATDFQNGIKKFVEWFL 338 >gi|15897713|ref|NP_342318.1| UDP-glucose 4-epimerase (galE-2) [Sulfolobus solfataricus P2] gi|6015668|emb|CAB57495.1| dTDP-glucose 4,6-dehydratase [Sulfolobus solfataricus P2] gi|13813992|gb|AAK41108.1| UDP-glucose 4-epimerase (galE-2) [Sulfolobus solfataricus P2] Length = 310 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 49/338 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++++GGAGF+GS L L+ + ++ ++D L+ A N K++ Sbjct: 3 MKILISGGAGFLGSHLTEALLEKGE-EITIVDDLSTAKYFNIRKDV-------------- 47 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 E I+ ++EF+ D +++ AA + I + +N +GT+ +LE R Sbjct: 48 --EFIKKKVEEFETEKKYDVVIHLAARPSPEDYIEHPVDTALSNSLGTYKMLEIAR---- 101 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAW 171 K RF+ S+ EVYGS E P S Y +K S+ L++A+ Sbjct: 102 ------KSNARFIYTSSSEVYGSASIIPTPETYWGYVNPIGIRSCYDESKRFSEALIMAY 155 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI----EGSHVFLYGDGQNVRDWLYVE 227 Y + + N YGP + ++R I +G V ++GDG R +LY+ Sbjct: 156 HRQYKLDTRIQRPFNVYGPGLREDGTYGRVVSRFIYQALKGEDVTVFGDGNQTRAFLYIS 215 Query: 228 DHVRA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D V A + L+ K G GE +NIG + E K I+ L +I K I+++ Sbjct: 216 DWVDATIKLIYKDGLEGEVFNIGSDKEIKIIE--------LANMIIKLTGSKSRIKYLPP 267 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP R A D +K K ++GW+P+ ++E GL T+ W+ Sbjct: 268 RPDDPPRRAADITKAKEKLGWYPKISLEEGLKLTINWF 305 >gi|147679101|ref|YP_001213316.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146275198|dbj|BAF60947.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 314 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 37/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L + V V D L+ G ++ +F +V + Sbjct: 1 MKILVTGGAGFIGSHIVDLLAGSGHV-VSVADDLS-TGRFENINPA-----VNFYRVSVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E +E +PDA+V+ AA+ V S+ TNI G+ LLE R + Sbjct: 54 SEEFGEVVARE-RPDAVVHQAAQVDVQHSLRDPLADAETNIQGSINLLEACRRFGVG--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG+ E+ P P SPY A+K ++++ + YG+ Sbjct: 110 ------KVVYASSAAVYGNPLSLPVDEEHPLVPRSPYGASKLAAEHYFRVYSEVYGVRYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP ++ + I R+++G ++GDG+ RD+++V D A L Sbjct: 164 VLRYANVYGPRQDAAGEGGVVAIFIDRLLKGEPPSIFGDGEQTRDFVFVRDVALANVAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 G G N+G D+ EI G L+AL + RPG Sbjct: 224 HGGD-GMVLNVGTGRATSVNDLFREIKKITGSPLEAL------------YCPPRPGDITH 270 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + + +I+ +GW P ++E GL +TV Y W Sbjct: 271 SYLANGRIRRVLGWNPSCSLEDGLRETVGHYRKVPGW 307 >gi|170747742|ref|YP_001754002.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170654264|gb|ACB23319.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 354 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 49/350 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIG+ L L D V+V D L+ G NL L++ + + + DI Sbjct: 6 ILVTGGAGFIGANLSDSLAADGH-AVIVYDILSRPGVEANLAWLRQRHGARIIPIV-ADI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + A+ E A+ +FAA+ V S++ + N++GT LLE R Sbjct: 64 RDIQELGRAVAE--AGAVFHFAAQVAVTTSLVAPRADMEINLLGTVNLLEALRA------ 115 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGL------------------FSEDMPYNPSSPYSAT 160 + L ST++VYG L D L E P + +PY + Sbjct: 116 --QARPVPLLYASTNKVYGDLPDIALEAVGDAYLPADPDLRRRGIGETRPLDFHTPYGCS 173 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K ++D VL + ++G+P + S YGP + + + R + G V LYGDG Sbjct: 174 KGAADQYVLDYARSFGVPAAVMRMSCIYGPRQMGNEDQGWVAHFLIRALAGEAVTLYGDG 233 Query: 218 QNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGG--NNERKNIDIVFEIGFLLDALIPK 273 + VRD L+V D V L + G +N+GG N + ++ +G LL + + Sbjct: 234 RQVRDILHVRDVVAVYRAALARIDDAAGHAFNVGGGPGNAVSLLQLLDHVGTLLGRPVSR 293 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 S+ RPG R Y D+ + + +G P G+ W Sbjct: 294 SFQAW--------RPGDQRYYVSDTRRAVARLGLAPFTGWRDGVADLAGW 335 >gi|325959041|ref|YP_004290507.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] gi|325330473|gb|ADZ09535.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] Length = 312 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 32/325 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDIC 60 +++VTGG GFIGS L V++ +V+++D + G + ++KE+ S + +F ++ Sbjct: 5 KIVVTGGLGFIGSHLVEKFVDNN--EVVIVDNQS-TGTIENIKELDISRIDTNFGSINDL 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E I D + + AA + V +S+ + NI GT +LE R Sbjct: 62 NLEEIFEGT-----DYVFHLAAVTSVPQSVEDPVKSNEVNITGTLKVLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D + + S+ VYG + SE++P NP SPY+ +KA+++ + Y +P Sbjct: 109 -KTDVKKLVFSSSSAVYGETEVLPISEEVPINPLSPYAVSKATAELYCNVYSEIYDLPTT 167 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP P +IP+ I ++++ +YGDG+ RD++ VE V A L Sbjct: 168 CLRYFNVFGPKQDPNSQYAAVIPIFINKLLKNERPTIYGDGEQTRDFVSVERVVEANELA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K G G +NIG + +I+ +FE L+ + K + R G + Sbjct: 228 AKSGETG-VFNIGL-GKSTSINQLFE---LVKECVKKDMEPV----YEPARSGEIKHSVA 278 Query: 297 DSSKIKSEIGWFPQENMESGLNKTV 321 D SK K+ IG+ P+ + L KT+ Sbjct: 279 DVSKAKA-IGFNPEAEYQQDLIKTI 302 >gi|108760627|ref|YP_631701.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622] gi|108464507|gb|ABF89692.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622] Length = 314 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 28/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS +C + V+ +D L+ G +L + + DI Sbjct: 1 MKVLVTGGAGFIGSHVCDEFLRGGH-DVIALDDLS-GGKRENLDPRVRLAVH-----DIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE +K +PD + + AA+ V RS+ NI G LLE R+ S Sbjct: 54 SREA-SELIKSEKPDVLCHLAAQMDVRRSVDDPSFDADVNIRGMLNLLEAARV-----SG 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F + +YG D E P P SPY +KAS + + + YG+P + Sbjct: 108 VKKVIF---SSTGGAIYGEQDVFPAPESHPTRPISPYGVSKASGELYLGYYRAQYGLPYV 164 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P ++ + R+I G ++G+G+ RD+++ D RA L Sbjct: 165 ALRYANVYGPRQNPHGEAGVVAIFSQRLIAGQGCTIFGEGKQTRDFVFGPDVARANRLAF 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +G NIG E +I+ ++ AL+ ++ + + +PG R +D Sbjct: 225 ENDYVGA-INIGTGVE-TDINRLY-------ALLAEAAGSSVSVAHAPGKPGEQMRSCVD 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + +GW P ++ GL +T+ ++ Sbjct: 276 NALARKVLGWEPSVDVREGLRRTLEYF 302 >gi|238928056|ref|ZP_04659816.1| NAD dependent epimerase [Selenomonas flueggei ATCC 43531] gi|238884016|gb|EEQ47654.1| NAD dependent epimerase [Selenomonas flueggei ATCC 43531] Length = 326 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS LC +++ L +V V+D L+ G+ +++ + ++ F F++ DI D Sbjct: 14 FLITGGAGFIGSNLCEAILS-LGHRVRVLDNLS-TGHTRNIENVCGNSKFEFIEGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 A ++ D +++ AAE V SI ++ TNIIGT ++E + K Sbjct: 72 AACHHACQDV--DYVLHLAAEVSVPESIDKPIDYTMTNIIGTVNMME---------AAAK 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F S+ VYG + E++ S Y+ TK +++ + YG+ Sbjct: 121 HGVKKFTYASSAAVYGDDETMPKREEIVGRRLSTYAVTKFAAEEYAHQYTMHYGLDCYGM 180 Query: 183 NCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--LYLV 236 N YG P +IP I ++ + GDG+ RD++YV+D V+A L Sbjct: 181 RYFNVYGRRQDPNGAYAAVIPTFIECLLRDEPPTINGDGEQSRDFVYVDDVVQANLLACA 240 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GE YN+ + + E+ +L L+ K F R G RR Sbjct: 241 APHEAAGEAYNVAAGKQLS----LNEMYAVLSKLLNKDLQPV----FGPVRKGDIRRSGA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +KI+ +G+ P+ + G+ + + WY +N Sbjct: 293 DIAKIRKYLGYHPEYDFARGITEAIQWYKEN 323 >gi|315636089|ref|ZP_07891345.1| NAD-dependent epimerase/dehydratase [Arcobacter butzleri JV22] gi|315479609|gb|EFU70286.1| NAD-dependent epimerase/dehydratase [Arcobacter butzleri JV22] Length = 363 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/376 (25%), Positives = 171/376 (45%), Gaps = 75/376 (19%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKE--- 45 M+++VTG AGFIGS L L +ND Q + +L G +N++++ Sbjct: 1 MKILVTGTAGFIGSHLAIKLLERGDEVVGLDNINDYYDQNVKYGRLQRTGIINNIEDGKN 60 Query: 46 ---------ISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF 96 I+ N + F+++++ D++ + + + DA+ N AA++ V S+ D + Sbjct: 61 IPYGKLITSITNPN-YKFIKINLEDKDSMMKLFETEKFDAVCNLAAQAGVRYSLTNPDAY 119 Query: 97 ITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ-ISTDEVYGSLDKGLFSEDMPY---- 151 + +NIIG +LE R + R L S+ VYG +E++P+ Sbjct: 120 MDSNIIGFMNILEACR----------HNNVRNLSYASSSSVYG------LNEELPFSTNH 163 Query: 152 ---NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 +P S Y+A+K S++ + + H +GI YGP+ P+ + L +EG Sbjct: 164 NVDHPISLYAASKKSNELMAHTYSHLFGISTTGLRFFTVYGPWGRPDMALFLFTKAALEG 223 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKK---------GRIGER---------YNIGG 250 + + ++ +G+ +RD+ Y++D V + V+ G+ GE YNIG Sbjct: 224 NKIDVFNNGEMLRDFTYIDDIVEGVIRVIDNPAKSDKNWDGKTGETSTSSAPYKIYNIGN 283 Query: 251 NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 NN K +D + I L +I K+ + D P YA D S + +G+ P Sbjct: 284 NNPVKLMDFINAIENKLGKIIEKNMMPIQA----GDVPA---TYA-DVSDLVENLGYKPA 335 Query: 311 ENMESGLNKTVCWYLD 326 ++ G++ V WYL+ Sbjct: 336 TPIQKGVDNFVDWYLE 351 >gi|294791653|ref|ZP_06756801.1| capsular polysaccharide biosynthesis protein I [Veillonella sp. 6_1_27] gi|294456883|gb|EFG25245.1| capsular polysaccharide biosynthesis protein I [Veillonella sp. 6_1_27] Length = 365 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-------YAGNLNSLKEISQ--SNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + L + E+S+ N++ Sbjct: 13 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKEYRLQQIDELSKDNKNIW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+ + ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 IFKKGNIADKSFVDEIFAIYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + ++ + S+ VYG+ + +S +D NP S Y+ATK S++ L ++ Sbjct: 133 HSY---DDGERGVEHLVYASSSSVYGANKQIPYSTDDKVDNPVSLYAATKKSNELLAYSY 189 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 190 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRNGGTIKIFNYGNCKRDFTYIDDIVE 249 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG +N +D V + + ++ + Y+ Sbjct: 250 GVSKVMSTAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSAGVLSEDYNF 309 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG D+S ++++ G+ P + GL + WY D Sbjct: 310 EEHKELVPMQPGDVPVTYADTSALEADFGFKPNTTLREGLKRFAIWYKD 358 >gi|212638417|ref|YP_002314937.1| nucleoside-diphosphate-sugar epimerase [Anoxybacillus flavithermus WK1] gi|212559897|gb|ACJ32952.1| Nucleoside-diphosphate-sugar epimerase [Anoxybacillus flavithermus WK1] Length = 324 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 25/327 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQV 57 ++ +TGGAGFIGS L R L+ +L +++VID + L++I F F V Sbjct: 12 KVCITGGAGFIGSHLGRKLL-ELDHELIVIDNFHPYYSTCRKQRQLQQIKNVGFFHFYDV 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + ++ QPD + + AA V S+L +I ++ T +L+ Sbjct: 71 DILQLDSLKQIFFHHQPDVVFHLAALPGVQPSLLEPLAYIDYDVKATVNVLQ-------- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYG 176 + + + L S+ VYG+ E+M SPY+A K S++ A+ H YG Sbjct: 123 -AAGEAEVQHVLFASSSSVYGNRAFQPLKEEMATGQVISPYAAAKYSAESFCHAYAHIYG 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + YGP+ P+ I I +++ + +YGD RD+ Y++D V + Sbjct: 182 YTMTIFRYFTVYGPWGRPDMAISKFIRQLLRNEPITVYGD-HTARDYTYIDDIVAGMIQA 240 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++ + +N+G ++ E L P H E R G Sbjct: 241 LERKGESDVFNLGAGQPVTMKQLLAE----LRNHFPHMRVHYEPPRL-----GDVVATWA 291 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K K +IG+ P+ ++ GL+KT+ W Sbjct: 292 DITKAKEKIGYEPRVSLREGLSKTIEW 318 >gi|187734545|ref|YP_001876657.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC BAA-835] gi|187424597|gb|ACD03876.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC BAA-835] Length = 308 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS + + D ++ V+D L Y NL L+ +F++ Sbjct: 1 MKILVTGGAGFIGSHIVEHY-QDKAEEIRVLDNLRTGYLKNLEGLRH-------TFIEGS 52 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICDRE +R A++ D I + AA V S+ E I N+ G +LEE + Sbjct: 53 ICDRELVRQAVQGV--DYIFHMAALVSVPESMSKISECIDINVNGLLNVLEE-----ASA 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + KK + S+ +YG E M P SPY+ TK +Y + + I Sbjct: 106 AGVKK----IVLASSAAIYGDNPTVPKLETMYPEPKSPYAITKLDGEYYLNMFRAEGKIN 161 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N +GP P+ +P+ I + ++G + +YGDG RD++YV+D V AL Sbjct: 162 TAAVRFFNVFGPRQDPKGAYAAAVPIFIEKAVKGEDITVYGDGSQTRDFIYVKDIVGALT 221 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V + + +N G + I L +I + S ++++ E RPG + Sbjct: 222 FVAEHPEVTGVFNAGYGGQ-------ITIEELAQNIIKAAGSSSKVLHAPE-RPGDVKHS 273 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K+++ GW P+ + GL T+ ++ Sbjct: 274 RACADKLRNA-GWQPRHTLPEGLATTLEYF 302 >gi|119509713|ref|ZP_01628858.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena CCY9414] gi|119465579|gb|EAW46471.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena CCY9414] Length = 316 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQV 57 + IVTG AGFIGS L L+ K +V+ ID+ Y L S+ + + F+ + Sbjct: 3 KTIVTGAAGFIGSHLVEALLQQGK-EVIGIDQFNDYYDPILKHKSIAHLQNAPNFTLIAG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWS 116 DI + ++ L++ + + + AA++ V S G + NI T ILLE + Sbjct: 62 DIQFLDW-QTLLQDV--EVVYHQAAQAGVRASWGEGFRNYTERNISATQILLEAAK---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D +D R + ST VYG + E +P P SPY TK +++ L + +G Sbjct: 115 ----DAQDLKRLVFASTSSVYGDAETLPTHEKIPPQPVSPYGITKLAAERLCRLYHKNFG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 +P++ YGP P+ +++ + +YGDGQ RD+ +V D + A L Sbjct: 171 VPMVALRYFTVYGPRQRPDMAFHKFFKAILQDEAIPIYGDGQQTRDFTFVSDVIAANLAA 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +GE +NIGG + +++ + ++ I K+Y IE G R A Sbjct: 231 ATVPQAVGEIFNIGGGSRVVLAEVLETMAEIVGKPIQKNY--------IEKAMGDARHTA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK + +G+ PQ ++ GL + W Sbjct: 283 ADVSKARQILGYQPQVSLREGLTQEWQW 310 >gi|255524621|ref|ZP_05391574.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] gi|255511645|gb|EET87932.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] Length = 341 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 25/336 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 ++TG AGFIG L + L+ + +V+ ID + Y NL LK + F F++ DI Sbjct: 13 LITGVAGFIGFYLSQKLL-EQGCRVIGIDNINDYYDVNLKYARLKILKPFEKFIFIKGDI 71 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + +E++P+ +VN AA++ V SI D +I +NIIG F +LE R ++ + Sbjct: 72 SDKAMMMNIFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFFNILEACR--YNSVD 129 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYGS K F E D +P S Y+ TK S++ + A+ H Y IP Sbjct: 130 H-------LVYASSSSVYGSNKKVPFEESDFVDHPVSLYAVTKKSNELMAHAYSHLYKIP 182 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN----VRDWLYVEDHVRALY 234 YGP P+ + G + ++ +G RD+ YV+D V + Sbjct: 183 TTGLRLFTVYGPMGRPDMAYFRFTQKYFAGEPISIFNNGNFEHDLYRDFTYVDDIVEGIE 242 Query: 235 LVLKKGRI----GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 +++ + + +NIG N+ K + + + L I + ++ +F +PG Sbjct: 243 ILISNPPLEIVPHKVFNIGNNSPEKLMIFIETLEKALSKAIGREVIFSK--KFEPMKPGD 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +G+ P +E GL + WY++ Sbjct: 301 VPATYASTDLLQETVGFKPSTTIEEGLQRFAEWYVE 336 >gi|148657680|ref|YP_001277885.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148569790|gb|ABQ91935.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 317 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 36/333 (10%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGF+GS LC R+L V+ +D L G+ +++ ++ FSF++ D+ Sbjct: 1 MRILITGGAGFLGSHLCDRFLAEGHT--VVAMDNLI-TGSTDNIAHLAGHPRFSFIKHDV 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L DAI++FA+ + + + + +GT L L+ Sbjct: 58 TNYIFVEGPL-----DAILHFASPASPVDYLELPIQTLKVGALGTHKAL--------GLA 104 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +DKK RFL ST EVYG + + P P Y K ++ + +A+ Sbjct: 105 KDKKA--RFLLASTSEVYGDPQIHPQPESYYGHVNPIGPRGVYDEAKRFAEAMTMAYHRY 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP +++P I + + G + +YGDG R + YV+D V Sbjct: 163 HGVETRIVRIFNTYGPRMRLRDGRVVPNFIQQALRGEPLTIYGDGSQTRSFQYVDDLVEG 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +Y +L + E NIG E F I + L+ +T + + + R D Sbjct: 223 VYRLLFSDEV-EPVNIGNPGE-------FTIKAFAE-LVNTLTGNTAGVVYKDLRTQDDP 273 Query: 293 RY-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D SK + +GW PQ ++E GL +T+ W+ Sbjct: 274 QVRQPDISKARRILGWEPQISLEEGLRRTIPWF 306 >gi|229000003|ref|ZP_04159574.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] gi|229007522|ref|ZP_04165117.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] gi|228753660|gb|EEM03103.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] gi|228759687|gb|EEM08662.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] Length = 330 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + LV++ + V+V+D NL + E + + F + D+ D+ Sbjct: 4 ILVCGGAGYIGSHAVKKLVDEGQ-SVIVVD------NLQTGHEDAIAEGVKFYKGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDIFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L SE+ P NP++ Y TK + + ++ + + Sbjct: 110 IDKFIFS--STAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +D V A +L LK G + YN+G N +IV + + + IP + Sbjct: 228 DDLVAAHFLGLKDLQNGGDSDFYNLGNGNGFSVKEIVEAVREVTNHEIPAEVA------- 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 281 -PRRAGDPARLVASSQKAKEKLGWSPQ 306 >gi|227826986|ref|YP_002828765.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|229584156|ref|YP_002842657.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] gi|227458781|gb|ACP37467.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|228019205|gb|ACP54612.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] Length = 307 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 50/338 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +++GGAGF+GS L L N+ +I + +D L+ + K + Sbjct: 1 MKFLISGGAGFLGSHLIENLANEHEITI--VDDLSTTKYIQLPKNV-------------- 44 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + I+ ++ F+ D I++ AA + + E + +N IGT W+ Sbjct: 45 --KLIKDKIENFKTNEKFDYILHLAARPSPEDYMNNPIETLLSNSIGT----------WN 92 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAW 171 L +K F+ S+ E+YG+ + E+ P S Y K S+ L +A+ Sbjct: 93 ALEIARKSDAIFMYTSSSEIYGNAEVLPIPEEYWGKVNPIGVRSCYDEGKRFSEALTMAY 152 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 YG+ V + N YGP + ++I I + + G + ++GDG+ R +LYV Sbjct: 153 YREYGLDVRIQRPFNVYGPRLREDGNYGRVISRFIYQALRGEDITVFGDGKQTRAFLYVT 212 Query: 228 DHVRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D V A L+ KG G NIG + E K I+ L +I + I+F+ Sbjct: 213 DWVEATKKLLFSKGIKGIVLNIGSDKEVKIIE--------LARMIINLTNSKSNIKFLPP 264 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP R A D +K K + W P+ ++E GL KT+ W+ Sbjct: 265 RPDDPSRRAADITKAKKLLNWEPKLSLEEGLRKTIDWF 302 >gi|162453060|ref|YP_001615427.1| hypothetical protein sce4784 [Sorangium cellulosum 'So ce 56'] gi|161163642|emb|CAN94947.1| galE5 [Sorangium cellulosum 'So ce 56'] Length = 332 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 46/348 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV-- 57 R++VTG +GFIGS L LV + +++ LV + G+L+ L E ++ + ++V Sbjct: 10 RVVVTGASGFIGSHLVEALVREGARVRALVRYTSGSRRGHLDRLPE----DVLAQVEVVP 65 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ D +RS ++ D + + AA + S + +++ TN+ GT +LE R + Sbjct: 66 GNVEDAGAVRSLVR--GADVVFHLAALIGIPYSYVAPQQYVATNVQGTLNVLEAAREHGA 123 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R + ST E YG+ E P SPYSATK +D L ++ ++G Sbjct: 124 ----------RVVHTSTSETYGTARYTPIDEAHPLTGQSPYSATKIGADKLAESYHLSFG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + V N YGP +IP + ++ GS G VRD +V D V LV Sbjct: 174 LEVATIRPFNTYGPRQSSRAIIPSVMQQLAAGSAALRIGSTAPVRDLNFVTDTVAGFLLV 233 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 R +G+ N+G IG L+ + + EL+ D R Sbjct: 234 GSSARAVGQTLNVGSGR-------AISIGDLVRLIFEVTGKRAELVT-------DDARVR 279 Query: 296 IDSSKI----------KSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D+S++ +G+ P+ +E GL +T + + +RP Sbjct: 280 PDASEVMVLLADFRRAAELVGYAPRVPLEEGLARTYAYVERHLTDYRP 327 >gi|254818968|ref|ZP_05223969.1| hypothetical protein MintA_03531 [Mycobacterium intracellulare ATCC 13950] Length = 271 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 31/280 (11%) Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E + A++E + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 1 MTDGETVHRAVREHH--VVFHLAANINVDQSLGDPESFLETNVMGTYRVLEAVRRYKN-- 56 Query: 119 SQDKKDQFRFLQISTDEVYGS----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 R + +ST EVYG D L E P+SPY A+KA++D L ++ + Sbjct: 57 --------RLIYVSTCEVYGDGHNLRDGELLDETAELKPNSPYGASKAAADRLCYSYYRS 108 Query: 175 YGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ V + N +G + LIP + + I G ++ ++GDG RD+LYV D VR Sbjct: 109 YGLDVTIVRPFNIFGVRQKTGRFGALIPRLVRQAINGENLTIFGDGSASRDYLYVSDIVR 168 Query: 232 ALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A LVL+ + G N + DIV + DA I + E R G Sbjct: 169 AYTLVLENSALRGRAINFASGINTRVKDIVEYVAGKFDAKIERR----------EARAGE 218 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R+ + KS +G+ P+ + G+++ + W D + Sbjct: 219 VARFPANIDFAKS-LGFKPEVGIWEGIDRYIQWAKDQPQY 257 >gi|94498205|ref|ZP_01304766.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58] gi|94422335|gb|EAT07375.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. SKA58] Length = 333 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 160/345 (46%), Gaps = 40/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M ++VTG AGFIG + L+ V+ ID L L+ L+E LF+ Sbjct: 1 MTILVTGAAGFIGMHVADRLMGQGH-AVVGIDNLNDYYPVALKQARLSRLRE-RHGKLFT 58 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++D D +++AL + +AIV+ A++ V S++ ++ +N+ G +LE R Sbjct: 59 FHELDFADMAAVQAALADQVIEAIVHLGAQAGVRYSLVNPHAYVRSNLSGHVNMLELAR- 117 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 ++ + S+ VYG + F ED +P S Y+ATK + + + + Sbjct: 118 --------ERHVRHLVYASSSSVYGGNESLPFRVEDRVDHPVSLYAATKRADELMSETYA 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + IP+ YGP+ P+ + + +R++ G + ++ G+ RD+ Y++D V Sbjct: 170 HLFRIPMTGLRFFTVYGPWGRPDMAMWIFTSRILAGEPIPVFNHGRMQRDFTYIDDIVDG 229 Query: 233 LY----------LVLKKG--RIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + LK G R R YNIG N +++ I L DA+ K+ Sbjct: 230 VIGCLDHPPTDDGALKAGGSRAPHRLYNIGNNRPE---ELMHLIAVLEDAIGMKAQ---- 282 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F +PG D S I +IG+FP+ +E+G+ + V WY Sbjct: 283 -VDFQPMQPGDVHATFADISAIVQDIGFFPRTAIETGVPRFVNWY 326 >gi|260760121|ref|ZP_05872469.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str. 292] gi|260670439|gb|EEX57379.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str. 292] Length = 337 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 20 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 77 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 78 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 125 ----RIFQASTSEVYGDPHVHPRPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + L+ Sbjct: 181 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGLHR 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 241 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 289 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 290 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 322 >gi|125654683|ref|YP_001033877.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] gi|221634556|ref|YP_002523244.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131] gi|77386343|gb|ABA81772.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] gi|221163429|gb|ACM04391.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131] Length = 334 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 51/352 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R++VTG AGFIG L R L+ + +V D +T Y L + + Q FS + Sbjct: 3 RILVTGTAGFIGFHLARLLLAE-GFRVHGYDGMTDYYDVALKRRRHAMLLQDPNFSATEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ EF P+ IV+ AA++ V S+ ++ N+IG+F ++E R Sbjct: 62 MLEDQALFDRVADEFAPEVIVHLAAQAGVRYSVENPRAYLDANVIGSFTVMEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + + ST VYG+ +E+MP+ + + Y+ATK +++ + A Sbjct: 117 ----RLKVAHLMMASTSSVYGA------NEEMPFRETDKADRQLTIYAATKKANESMGHA 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W H +G+P+ + YGP+ P+ + + ++E + +Y G+ RD+ YV+D V Sbjct: 167 WAHVHGLPITMFRFFTVYGPWGRPDLALFRFVEAILEDRPIEIYNHGEMWRDFTYVDDLV 226 Query: 231 RALYLVLKKGRIGER----------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 RA+ L+++ G NIG +++ + +D V I L +S Sbjct: 227 RAIRLLIEAVPGGPETAVEEDSLSPAAPFRIVNIGNSDKVRLLDFVEAIEESLGRRAIRS 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 Y + + D P D+ ++ G+ PQ ++ G+ + V WY D Sbjct: 287 YLPMQ----VGDVPA----TWADAGLLQRLTGYRPQTDIRDGIAQFVSWYRD 330 >gi|291327290|ref|ZP_06127677.2| UDP-glucuronate 5'-epimerase [Providencia rettgeri DSM 1131] gi|291310877|gb|EFE51330.1| UDP-glucuronate 5'-epimerase [Providencia rettgeri DSM 1131] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 152/345 (44%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG LC+ L+ +V+ ID L Y L L + Q LF F+ Sbjct: 3 MKYLVTGSAGFIGFTLCQRLLESGH-EVVGIDNLNAYYDQGLKQSRLHLLEQFPLFRFIH 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DRE +R + Q D +++ AA++ V S+ + +N+ G +LE R Sbjct: 62 LDITDRETVRVLCTQEQFDRVIHLAAQAGVRYSLENPFAYADSNLTGHLAILEGCR---- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 Q K + S+ VYG DK F+ DM + P S Y+ATK +++ + ++ H Y Sbjct: 118 ---QAKVKHLVY--ASSSSVYGVTDKTPFTTDMATDHPISLYAATKKANELMAHSYSHLY 172 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y +G RD+ +V+D V + Sbjct: 173 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEPIDVYNNGNLSRDFTFVDDIVEGVIR 232 Query: 236 V----------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + + YNIG K I+ + + + K+ Sbjct: 233 ISDIIPQANPNNHSASPAESSAPYRIYNIGNGQPVKLIEFI--------SALEKALGKEA 284 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ + G D+ + + G+ PQ ++E G+ V WY Sbjct: 285 IKNFLPMQAGDVYTTWADTEDLFNVTGYRPQVSIEQGVQAFVDWY 329 >gi|220919515|ref|YP_002494819.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957369|gb|ACL67753.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 324 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 32/334 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIG + + L+ + QV+ ID L ++ +LKE + L F F ++ Sbjct: 4 ILVTGAAGFIGHFVAKRLLAAGR-QVVGIDNLVPYYDV-ALKEARLARLTGIPGFRFERM 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR E +PD +++ AA+ V S+ ++ NI G +LE C Sbjct: 62 DLADRAAAERLFAEVRPDGVIHLAAQPGVRYSLENPHAYVDANITGFLNVLE------GC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + S+ VYG K FS D +P S Y+ATK +++ + + H +G Sbjct: 116 RHHAVQ---HLVYASSSSVYGGNTKVPFSVGDNVDHPVSLYAATKKANELMAHTYSHLFG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + P+ T+ I EG + ++ G RD+ YV+D V + Sbjct: 173 IPATGLRFFTVYGPWGRPD-MAPMLFTKAILEGRPIKVFNHGNMKRDFTYVDDIVEGVLR 231 Query: 236 VLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 V ++ G YNIG + +D++ IG L+ L+ + L D P Sbjct: 232 VYERPPPGAGVRARVYNIGNSTP---VDLMHFIG-TLERLLGREAEKQMLPMQAGDVPA- 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +A D S ++ +I + P+ ++E GL + V WY Sbjct: 287 --TFA-DVSDLEHDIDFRPRTSLEDGLRQLVEWY 317 >gi|149915934|ref|ZP_01904458.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149810257|gb|EDM70103.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 337 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 157/349 (44%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+ +TG AGFIG L L+++ ++V D +T Y L + +S F+ Q Sbjct: 3 RVFITGTAGFIGFHLAALLLDE-GVEVHGFDGMTDYYDITLKQRRHAILSGKPGFTATQA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + A+ PD IV+ AA++ V S+ ++ N+IG+F ++E R Sbjct: 62 MLEDTAALDRAVDACAPDVIVHLAAQAGVRYSLENPRAYLDANVIGSFNVMEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYG 176 + + L ST VYG+ + ++E M + + Y+ATK +S+ + A+ H +G Sbjct: 117 ----RHEVRHLLMASTSSVYGAETQMPYAETMKADTQMTIYAATKKASEAMAHAYAHLWG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP+ P+ ++ G + +Y G RD+ YV+D VRA+ L+ Sbjct: 173 VPTTMFRFFTVYGPWGRPDMAYFKFTDAILNGRPIDIYNHGDMYRDFTYVDDLVRAIRLL 232 Query: 237 L--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + I E NIG + + +D V I DAL K+ + Sbjct: 233 IDAAPERPATPADIAEGDSLSPVAPWRVVNIGNSTSVRLLDFVEAIE---DALGVKAQRN 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +E + G D+S ++ G+ PQ +M G+ + V WY D Sbjct: 290 -----LMEMQKGDVPATWADASLLQRLTGYKPQTDMRDGIARFVAWYRD 333 >gi|108757676|ref|YP_631700.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus xanthus DK 1622] gi|108461556|gb|ABF86741.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus xanthus DK 1622] Length = 319 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 40/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ V GGAGF+GS LC L++D V+ +D L GN +L+ ++ FSF++ DI + Sbjct: 5 RVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNL-ITGNEENLRTLNGRPGFSFVKADITE 63 Query: 62 RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + L D + N A+ S +D + L E + IGT + L Sbjct: 64 RIPVEGPL-----DYVFNMASPASPIDYAQLPL-ETLRVGSIGT----------ENGLKL 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + ++ FL ST EVYG ED P P S Y K S+ + A+G T Sbjct: 108 AEANKAVFLMASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAITAAYGRTK 167 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V + N YGP +++P + + ++G ++GDG R + YV+D V L Sbjct: 168 GVQVRIVRIFNTYGPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGL 227 Query: 234 YLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ++ NIG E R+ + V ++I K +D P Sbjct: 228 VRLMLSDE-SNPVNIGNPREMTIRQFAEAVRAAAGGGGSIIEKPLP--------KDDP-- 276 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D ++ ++ +GW P+ +E GL +T+ W+ Sbjct: 277 -KQRQPDITRARTLLGWEPKVPLEEGLRETIAWF 309 >gi|327189957|gb|EGE57081.1| putative nucleoside-diphosphate-sugar epimerase protein [Rhizobium etli CNPAF512] Length = 326 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/325 (27%), Positives = 139/325 (42%), Gaps = 21/325 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTG GFIGS L LV ++V + + + L + F + D+ D Sbjct: 3 KALVTGADGFIGSHLVETLVRS-GVEVRALCQYNSFSSWGWLDQSEYRGKFEVILGDVRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +RS K D I + AA + S +I TN+ GT +L+ Sbjct: 62 PAQMRSVAKGV--DTIFHLAALIAIPYSYQAPSSYIDTNVHGTLNVLQGAL--------- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R +Q ST EVYG+ SE P SPYSA+K +D + ++ ++ +PV + Sbjct: 111 DAGVGRVIQTSTSEVYGTARFVPISESHPLQAQSPYSASKIGADAIAYSYHSSFDLPVTI 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 + N YGP +IP I++++ G RD+ +V+D L L Sbjct: 171 ARPFNTYGPRQSARAVIPTVISQLLSARTTLKLGALSPTRDFNFVQDTCDGFLALAACDE 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDS 298 +G+ NIG +E D V I ++ A + L RP + R D+ Sbjct: 231 AVGQTVNIGSGSEISIGDTVRLIADIIGASVEIECDEQRL------RPVNSEVERLCCDN 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 S IKS G+ P+ ++E GL TV W Sbjct: 285 SLIKSLTGFSPRYSLEDGLKATVEW 309 >gi|309388545|gb|ADO76425.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM 2228] Length = 314 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 157/332 (47%), Gaps = 32/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ ++TG AGFIGS L + L+N + +V+ ID T Y+ +L ++K I + F+FL+ Sbjct: 1 MKHLITGAAGFIGSNLAKELLNAGE-EVIGIDCFTDYYSRDLKERNIKNILDNPNFTFLE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI--TTNIIGTFILLEETRLW 114 D+ ++ LK+ D I + AA++ V RS G D I NI+ T LLE R Sbjct: 60 KDLLQIN-LKKLLKDI--DYIYHQAAQAGV-RSSWGEDFEIYNQNNILLTQKLLEAAR-- 113 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + +F+ S+ VYG D+ E P SPY +K + + L + Sbjct: 114 ------EAEQLKKFVYASSSSVYGDTDQLPMQEKNRLQPVSPYGVSKLAGENLAYLYYKN 167 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P + YG P+ + I + G + ++GDG+ R++ YV D RA Sbjct: 168 FKVPTVSLRYFTVYGQGQRPDMAFHIFIKAFLTGKEINIFGDGKQSRNFTYVGDIARANI 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD---ALIPKSYSHTELIRFIEDRPGHD 291 L +K GE NIGG+ + G +L+ LI + + I + G Sbjct: 228 LAAQKAPAGEIINIGGSGK----------GIVLNDTLDLIKELTNCNTKINYTSKVKGDV 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + D+SK K +G+ PQ + + GL + V W Sbjct: 278 KHTSADTSKAKKLLGYQPQVSFKEGLKREVEW 309 >gi|283852486|ref|ZP_06369754.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. FW1012B] gi|283572094|gb|EFC20086.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. FW1012B] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG LCR ++ + V D L+ A + + +S+ F+F+Q Sbjct: 1 MNILVTGAAGFIGFHLCRRFLS-MGHAVTGCDNLSPYYSVALKKDRVALLSREARFTFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR + +VN AA++ V S+ D++I NI+G F +LE R Sbjct: 60 EDMADRAAMDRLFDAGGFTHVVNLAAQAGVRHSLTHPDDYINANILGYFNILENCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q K F F S+ VYG K FS D +P S Y+A+K S++ + ++ + + Sbjct: 116 ---QHKVGHFVF--ASSSSVYGLNTKMPFSVHDNVDHPISLYAASKKSNELMAHSYSYLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++E + ++ G+ RD+ Y++D V + Sbjct: 171 GLPCTGLRFFTVYGPWGRPDMALFLFTKAILEDKPIQVFNHGKMERDFTYIDDIVEGVVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V YNIG NN ++ ++ IG + +AL K+ Sbjct: 231 VTLNTAAPNPDWNPAAPDPSTSMAPYRLYNIGNNN---SVSLLRFIGAIEEALGKKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + +PG + + ++G+ P +E+G+ + + WY Sbjct: 285 --IMEMLPLQPGDVPATRANVDDLIRDVGFQPSTTIETGIGRFIEWY 329 >gi|332307670|ref|YP_004435521.1| NAD-dependent epimerase/dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174999|gb|AEE24253.1| NAD-dependent epimerase/dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 332 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 37/344 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L N +V+ +D L Y L LK I + F+F++ Sbjct: 1 MKYLVTGAAGFIGNYVAEKLCNQGH-EVIGLDNLNDYYDPELKLARLKRIEHFDNFTFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR+ I + + + D +++ AA++ V SI +I +N+ G +LE R Sbjct: 60 ADISDRDTIATLFSQQKFDRVIHLAAQAGVRYSIENPMAYIDSNLTGMATILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ K F+E D P S Y+ATK S++ + + H Y Sbjct: 116 -----HNNVEHLVYASSSSVYGANKKIPFAESDRVDYPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P T + + ++ DG+ RD+ Y++D V + Sbjct: 171 ALPTTGLRFFTVYGPWGRPD-MAPFLFTDAVANDRPIKVFNDGKMQRDFTYIDDIVEGIV 229 Query: 235 LV------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + + + YNIG N+ +++ I + +AL K+ + Sbjct: 230 RIQDVIPKPVEQAPTESSPYYKLYNIGNNSP---VELEAFITCIENALGKKAVKN----- 281 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + G R D + ++SEIG+ P+ +++ G+N V W+ D Sbjct: 282 YMPMQDGDVVRTFADITNLESEIGFKPKTDLQDGINHFVDWFKD 325 >gi|323454754|gb|EGB10623.1| hypothetical protein AURANDRAFT_69683 [Aureococcus anophagefferens] Length = 362 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 153/332 (46%), Gaps = 30/332 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSFL 55 ++VTGGAGF+GS + L+ + +V+V+D++ NL+ L+ N+ F Sbjct: 42 VLVTGGAGFVGSHVAEALLARGE-RVVVVDEVNDYYDVSRKEANLDVLRRAGGDNVRIF- 99 Query: 56 QVDICDRECIRSALKEF-QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DICD + + P +V+ AA + V SI ++ +N+ GT LLE Sbjct: 100 RGDICDVAFLEQVFETCPMPRRVVHMAARAGVRPSIDDPFVYVHSNVHGTTRLLELAA-- 157 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 K F+ S+ VYG K LFSE D P SPY+ATK + + L + H Sbjct: 158 -------KHGSDSFVFASSSSVYGGSKKALFSETDAVDLPVSPYAATKKACELLAYTYHH 210 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLA-ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y + + +GP P+ + PL + ++ G + +GDG + RD+ YV+D V Sbjct: 211 LYKMNIAGLRFFTVFGPRGRPD-MAPLKFVDKISRGEPIDRFGDGSSSRDYTYVDDVVDG 269 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + L + + YN+G + + D + L+ K +IR D+PG Sbjct: 270 VLKALDRPLGYQIYNLGNGSPTRLNDFI--------KLVEKYTGKNAVIRQKPDQPGDVP 321 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK K+ + + PQ G+ K V WY Sbjct: 322 RTCADISKAKTLLDYDPQTPFPEGIRKLVEWY 353 >gi|291486489|dbj|BAI87564.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. natto BEST195] Length = 339 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 97/357 (27%), Positives = 164/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ +L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKDL-TFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDAVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 + +K + + S+ VYG + +ED P ++PY TK + ++ HT Sbjct: 110 AMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDL-HTADNE 168 Query: 178 -PVLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 V L N +G P P L+P +A + + + ++G DG Sbjct: 169 WSVALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTG 228 Query: 220 VRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V E HV+AL VL + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RF + RPG D +K K ++GW + +E +C ++W W+ Sbjct: 285 -----YRFADRRPGDIATCFADPAKAKRDLGWEAKRGLEE-----MCA---DSWRWQ 328 >gi|303229691|ref|ZP_07316479.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515816|gb|EFL57770.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 305 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 30/328 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGGAGFIGS L L+ L VLVID LT ++E +F+++D+ Sbjct: 1 MRVCVTGGAGFIGSHLVDRLIA-LGHTVLVIDNLT-----TGVREFVNPKA-TFIEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S +F+P + + AA++ V S+ N++G +LE R Sbjct: 54 DAN-IESIFADFKPQVVFHEAAQTMVPASMENPKMDCDVNLMGLINMLEAAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + FL S+ VYG LD +EDM P+S Y TK +++ + + +G+ + Sbjct: 105 -KHNVSHFLMPSSAAVYGDLDTLPLTEDMSGKPTSFYGLTKLTAEGYLRIYEQAFGLKTV 163 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP E + R+I E + ++GDG+ RD++YV D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISIFNRLINEDKPLTIFGDGEQTRDFVYVADVVEANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE-DRPGHDRRYAI 296 + YNI N ++V G+ S S E++ E +R G R + Sbjct: 224 NHPDLTGIYNISTNTSTSVNELV---GYF------ASISGKEIVTNYEAERVGDIRHSRL 274 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K K + G+ +++ GL T ++ Sbjct: 275 CNKKAKKDFGFEATVSLDCGLGDTFSYF 302 >gi|238795491|ref|ZP_04639006.1| CDP-paratose 2-epimerase [Yersinia mollaretii ATCC 43969] gi|238720610|gb|EEQ12411.1| CDP-paratose 2-epimerase [Yersinia mollaretii ATCC 43969] Length = 340 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 160/343 (46%), Gaps = 28/343 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + L ++V+V D L+ G+ +L+ + F+ + DI Sbjct: 1 MKLLITGGCGFLGSNLASHAI-QLGMEVVVFDNLSRHGSYENLRWLESIGKFTHVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 ++ + ++++QP I + A + + SI + N+ GTF LLE RL+ Sbjct: 60 NKNDVVKLIQQYQPHNIFHLAGQVAMTTSIDNPQKDFDINVGGTFNLLEAIRLFNPNCGV 119 Query: 115 -WSCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +S ++ D +F TD Y ++ F E++ SPY +K ++D +L + Sbjct: 120 IYSSTNKVYGDLEQFTYRETDTRYECIEMPDGFDENVQLTFHSPYGCSKGAADQYMLDYA 179 Query: 173 HTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSH------VFLYGDGQNVRDW 223 YG+ + S+ YG F + + + IE S + G G+ VRD Sbjct: 180 RIYGLKTAVFRHSSMYGGRQFATVDQGWVGWFCQQAIETSKNNVITPFTISGTGKQVRDL 239 Query: 224 LYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 L+ +D ++ + ++K +I GE +NIGG IV + L I ++ + T+LI Sbjct: 240 LHADDMIKLYFSGMRKIDKISGEVFNIGGG-------IVNSLSLLELFKILENNTSTKLI 292 Query: 282 -RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + R R + + K W P + E G+ K + W Sbjct: 293 YKNLPARSSDQRVFVANIRKASEAFNWVPTVSSEEGVKKMLEW 335 >gi|269797719|ref|YP_003311619.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] gi|269094348|gb|ACZ24339.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] Length = 307 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS L L+ +L VLVID L+ G + + E ++ F+++D+ Sbjct: 1 MNICVTGGAGFIGSHLVDRLI-ELGHDVLVIDDLS-TGMRSFVHEDAR-----FIEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S +EF+P + + AA++ V S+ N+IG +L+ R Sbjct: 54 DPKLL-SVFEEFKPAIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +FL S+ VYG L +ED+ PSS Y TK +++ + + +G+ + Sbjct: 105 -KVKVEQFLMPSSAAVYGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTV 163 Query: 181 LSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP +I + ++EG + ++GDG+ RD++YV+D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIE-DRPGHDRRY 294 + G+ YN+ N G ++ LI ++ S T+ + + E +R G + Sbjct: 224 ENGQCTGIYNVSTNK-----------GTSVNELITRFRAISGTDFMVYYENERIGDIKHS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + G+ +E+GL KT+ ++ Sbjct: 273 RLSNVKAERDFGFIATTTLEAGLQKTLEYF 302 >gi|305676528|ref|YP_003868200.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. spizizenii str. W23] gi|305414772|gb|ADM39891.1| UDP-glucose 4-epimerase [Bacillus subtilis subsp. spizizenii str. W23] Length = 339 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 62/361 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ A LN +KEI+ +L +F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSAEALNRVKEITGKDL-TFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + S E + +A+++FA V S+ ++ N+ GTFIL C Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 +K + + S+ VYG + +ED P ++PY TK A +++ Sbjct: 110 VMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLYTADNEW 169 Query: 167 LV--LAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------ 215 V L + + +G ++ S G P P L+P +A + + + ++G Sbjct: 170 SVALLRYFNPFG-----AHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTK 224 Query: 216 DGQNVRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V E HV+AL VL + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLAEGHVKALEKVLNSTG-ADAYNLGTGTGYSVLEMVKAFEKVSGKEV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 P RF + RPG D +K K E+GW + +E +C ++W W Sbjct: 284 P--------YRFEDRRPGDIATCFADPAKAKRELGWEAKRGLEE-----MCA---DSWRW 327 Query: 332 R 332 + Sbjct: 328 Q 328 >gi|269797745|ref|YP_003311645.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] gi|269094374|gb|ACZ24365.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] Length = 365 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-------YAGNLNSLKEISQ--SNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + L + E+S+ N++ Sbjct: 13 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKEYRLQQIDELSKDNKNIW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+ + ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 IFKKGNIADKSFVDEIFAIYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 + ++ + S+ VYG+ + +S +D NP S Y+ATK S++ L ++ Sbjct: 133 HSY---DDGERGVEHLVYASSSSVYGANKQIPYSTDDKVDNPVSLYAATKKSNELLAYSY 189 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 190 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRNGGTIKIFNYGNCKRDFTYIDDIVE 249 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG +N +D V + + ++ + Y+ Sbjct: 250 GVSKVISTAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSAGVLSEDYNF 309 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG D+S ++++ G+ P + GL + WY D Sbjct: 310 EEHKELVPMQPGDVPVTYADTSALEADFGFKPNTTLREGLKRFAIWYKD 358 >gi|283798007|ref|ZP_06347160.1| UDP-glucuronate 4-epimerase [Clostridium sp. M62/1] gi|291074310|gb|EFE11674.1| UDP-glucuronate 4-epimerase [Clostridium sp. M62/1] gi|295091848|emb|CBK77955.1| Nucleoside-diphosphate-sugar epimerases [Clostridium cf. saccharolyticum K10] Length = 357 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 35/356 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDL--KIQVLVIDKLT--YAGNLNS----LKEISQ------ 48 +++TG AGFIG L ++ + ++++ ID L Y L L E Q Sbjct: 10 VLITGAAGFIGFHLTMAMLREKGKAVRIVGIDNLNDYYDPALKRERLFLAEEEQKKQRKA 69 Query: 49 --SNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI 106 S+ F F+Q D+ D + + ++++P +++ AA++ V S+ E+I TNI G F Sbjct: 70 GGSSSFLFIQADVADEKAVAQIFEDYKPSLVLHLAAQAGVRYSVDHPKEYIRTNIAGFFN 129 Query: 107 LLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSD 165 +LE R ++K + + S+ VYG K +S +D +P+S Y+ATK S + Sbjct: 130 ILEACRSL-----REKGEPLHLVFASSSSVYGDNQKIPYSVDDKTDSPASLYAATKKSGE 184 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L A+ Y IP YGP+ P+ RM++G + LY G RD+ Y Sbjct: 185 LLARAYSRLYKIPATGLRFFTVYGPFGRPDMAYFKFTERMVKGIPITLYNYGDMRRDFTY 244 Query: 226 VEDHVRALYLVLKKGRIGER-------YNIGGNNERKNIDIV--FEIGFLLDALIPKSYS 276 V+D V + + E +NIG ++ K D V E +I K Sbjct: 245 VDDVVGCILKISGHPPKSENGCVPFRIFNIGNSHPEKLEDFVCLLEESLKRHGVIKKD-- 302 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 TE + ++ +PG + D S+ + E G + GL++ WY + R Sbjct: 303 -TERV-YLPMQPGDVYQTYADMSEYEKEFGAVSFTRLREGLDRFAGWYAEYQRQKR 356 >gi|149909354|ref|ZP_01898010.1| putative nucleotide sugar epimerase [Moritella sp. PE36] gi|149807671|gb|EDM67619.1| putative nucleotide sugar epimerase [Moritella sp. PE36] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ ++TG AGFIGS C L+ QV+ +D L Y NL L ++S LF+FL+ Sbjct: 1 MKYLITGAAGFIGSR-CAELLCQQGHQVIGVDNLNDYYDVNLKHARLANTTKSALFTFLE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + E Q D +++ AA++ V SI + +N+ G +LE R Sbjct: 60 LDLADRDGVAALFAEHQFDRVIHLAAQAGVRYSIDNPMAYADSNLTGFLTVLEGCR---- 115 Query: 117 CLSQDKKDQFRFL-QISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 +Q + L S+ VYG +K FS D +P S Y+A+K S++ + + H Sbjct: 116 ------NNQVKHLVYASSSSVYGLNNKTPFSTSDSVDHPISLYAASKKSNELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ + +I G + +Y +G +RD+ Y++D V + Sbjct: 170 YGVPTTGLRFFTVYGPWGRPDMALFKFTKAIIAGETIDVYNNGDMLRDFTYIDDIVAGVL 229 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + K +D I L D+L K+ Sbjct: 230 QIQDVIPTPDTEWKVETGSPATSSAPYRVYNIGHGSPVKLMDY---IEALEDSLGIKAKK 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG D+ + + G+ + ++ G+ V WY D Sbjct: 287 N-----FMPMQPGDVYATYADTQDLFAVTGYTSKVKVKEGVKAFVDWYRD 331 >gi|163788985|ref|ZP_02183429.1| putative udp-glucuronic acid epimerase [Flavobacteriales bacterium ALC-1] gi|159875649|gb|EDP69709.1| putative udp-glucuronic acid epimerase [Flavobacteriales bacterium ALC-1] Length = 353 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 160/351 (45%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKEI-- 46 M+++VTG AGFIG + L +ND L +L G + E+ Sbjct: 15 MKVLVTGAAGFIGFYTSKVLLAKGHQVIGLDNINDYYDVNLKFSRLNELGVSRNDAEVFN 74 Query: 47 ----SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 S+++ FSF+++++ DRE + K Q D + N AA++ V S+ + +I +N++ Sbjct: 75 TICKSENDNFSFVRMNLEDREALPKLFKNEQFDIVCNLAAQAGVRYSLENPETYIDSNLV 134 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G +LE C D K + S+ VYG +K FS +D +P S Y+ATK Sbjct: 135 GFLNILE------CCRHNDIK---HLVYASSSSVYGLNEKIPFSTDDNVDHPISLYAATK 185 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H + +P YGP+ P+ + L ++ + ++ G+ R Sbjct: 186 KSNELMAHTYSHLFKVPTTGLRFFTVYGPWGRPDMAMFLFTDAIVNDRPIKVFNHGKMER 245 Query: 222 DWLYVEDHVRALYLVLKKG---RIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPK 273 D+ Y++D V + +++K RI YNIG NN K +D + EI LD + K Sbjct: 246 DFTYIDDIVEGVVRIIEKSPQQRIEANNYYKVYNIGNNNSVKLLDFIKEIEVNLDKVATK 305 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG R D ++ + + P +++ G+ + W+ Sbjct: 306 D--------MLPIQPGDVERTWADVDELIKDYDYRPNTSIKHGVKSFIDWF 348 >gi|144897507|emb|CAM74371.1| NAD-dependent epimerase/dehydratase [Magnetospirillum gryphiswaldense MSR-1] Length = 326 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 32/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L+ + QV+ +D L A L + Q FSF+Q Sbjct: 1 MSVLVTGAAGFIGYNTSLRLLARGE-QVVGVDSLNAYYDPALKAKRLDHLRQYPGFSFVQ 59 Query: 57 VDICDRECIRSALKEFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DI DR + + + PD A +N AA++ V S+ ++ +N+ G ++LE R Sbjct: 60 ADIADRAAMAAVAQA-HPDITAYINLAAQAGVRHSLTAPHDYSHSNVEGHLVMLEMARAN 118 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 +C F+ S+ VYG+ K FS +D P S Y+ATK + + + ++ H Sbjct: 119 KNCR--------HFVYASSSSVYGANTKLPFSVDDRVDQPISLYAATKRAGELMSHSYSH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP YGP+ P+ L T ++ G + ++ +G RD+ Y++D V + Sbjct: 171 LYRIPTTGLRFFTVYGPWGRPDMAAYLFATAILAGKPITVFNNGDMRRDFTYIDDIVSGV 230 Query: 234 YLVLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 VL + YNIG NN K +D + LI + F Sbjct: 231 VGVLDNPPADDGVAPPCRLYNIGNNNSEKLMDFI--------GLIEQCLGRKAEYDFRPM 282 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D S I+ ++G+ P + G+ K + W+ Sbjct: 283 QPGDVKETYADISAIQKDVGFAPTTPITVGVPKFIDWF 320 >gi|327404172|ref|YP_004345010.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] gi|327319680|gb|AEA44172.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] Length = 332 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 29/331 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-------LKEISQSNLFSF 54 +++VTG GFIGS +LV +L + + Y + N+ +E+ Q Sbjct: 7 KVLVTGADGFIGS----HLVENLIKEGAQVRAFCYYNSFNNWGWLDSFPRELLQQ--IEV 60 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D +R+A+K D + + AA + S D ++ TN+ GT +++ R Sbjct: 61 FTGDVRDPNGVRTAMKGI--DIVYHLAALIAIPYSYHSPDAYVDTNVKGTLNIVQAARDL 118 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + R L ST EVYG+ E P SPYSATK +D + ++ + Sbjct: 119 GTE---------RVLVTSTSEVYGTAQYVPIDEKHPRQGQSPYSATKIGADSIAESFYRS 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P+ + N YGP +IP IT+++ G + GD RD ++ +D + Sbjct: 170 FEMPITIVRPFNTYGPRQSARAIIPTIITQLLNGYNEINLGDLTPTRDLVFAKDTAQGFV 229 Query: 235 LVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + ++ G NI +NE D+ E L+ + P + E R ++ R Sbjct: 230 EISLCDKLNGHDVNIATHNEISIGDLANE---LIKQINPGATIQQEEQRLRPEKSEVFRL 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D+SK+ GW P+ +E GL +T+ W+ Sbjct: 287 FG-DNSKLFEYTGWKPETTLEEGLRQTIEWF 316 >gi|163847307|ref|YP_001635351.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|163668596|gb|ABY34962.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] Length = 361 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIG L YL+ + V ++D L+ NL L+E S L F+Q DI Sbjct: 26 LITGGAGFIGCNLADYLLARGE-HVTIVDNLSRPRTPLNLAWLQERYGSRL-RFVQADIR 83 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +++ + + + + A + V S+ N +GT +LE RL Sbjct: 84 DAAVMQAVIPGHR--VVYHLAGQVAVTTSVQDPRSDFEINALGTLNILEAARL------- 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED--------MPYNPS--------SPYSATKASS 164 + F ST++VYG ++ ED +P+ SPY +K ++ Sbjct: 135 ASEPPIVFFA-STNKVYGGMETVAVVEDETRYRYRDLPHGVPEHQLLDFHSPYGCSKGAA 193 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNV 220 D V + YG+ ++ S YGP F + AI ++ + +YG+G+ V Sbjct: 194 DQYVRDYARIYGLKTVVFRQSCIYGPRQFGVEDQGWAAHFAIAALLN-RPITIYGNGKQV 252 Query: 221 RDWLYVEDHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 RD LYV+D + A L + GRI YNIGG + + I E G LL LI + Sbjct: 253 RDMLYVDDLIAAYMAALDRIDQVSGRI---YNIGGGPQ-NALSIWAEFGPLLSRLIGREI 308 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R+ + RPG Y D S + ++ W PQ ++ G+ + V W D+ Sbjct: 309 P----VRYGDWRPGDQPVYISDISLAQRDLAWQPQVSVYEGVERMVGWIRDH 356 >gi|224826778|ref|ZP_03699878.1| NAD-dependent epimerase/dehydratase [Lutiella nitroferrum 2002] gi|224600998|gb|EEG07181.1| NAD-dependent epimerase/dehydratase [Lutiella nitroferrum 2002] Length = 325 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 61/352 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG A+C L++ + V+ +D L YA L L + F+F + Sbjct: 1 MKVLVTGAAGFIGRAVCEKLLDKGGVDVVAVDNLNDYYAVELKHARLATLQSRPGFAFHR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D + + + + D +++ AA++ V SI + +N+ G +LE + Sbjct: 61 LDIADWDGLEALFAAERVDYVIHLAAQAGVRYSIQNPHAYAQSNLTGFTNVLE------A 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG K FSED + P S Y+ATK +++ + ++ H Y Sbjct: 115 CRRHPVK---HLVYASSSSVYGQNAKVPFSEDDRVDAPVSFYAATKKANEVMAHSYAHLY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ L +++G + ++ G+ RD+ Y++D V + Sbjct: 172 ALPTTGLRFFTVYGPWGRPDMAPWLFTEAILKGETIKVFNHGKMQRDFTYIDDIVEGVLR 231 Query: 236 VLK---KGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V++ +G G+ +NIG +N EL++FI Sbjct: 232 VMEHVPQGADGQPPYRLFNIGNHNP------------------------VELMKFIRATE 267 Query: 289 GHDRRYAI----------------DSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A+ D++++++ +G+ P + G+ + V WY Sbjct: 268 AACGREAVKDYYPMQDGDVPVTYADTARLRAAVGFSPDTPLADGMQRFVAWY 319 >gi|330809787|ref|YP_004354249.1| UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377895|gb|AEA69245.1| putative UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 323 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 31/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + L +D QV+ ID L Y+ L L ++++ F F Sbjct: 1 MKVLVTGVAGFIGFHTAKRLCSDGH-QVIGIDNLNSYYSVELKQARLAQLTECRDFRFQL 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D++ + E D +V+ AA++ V SI D + +N++G +LE R Sbjct: 60 LDVADKQALLELFVEHAFDQVVHLAAQAGVRYSIDNPDVYAQSNLVGFLNILEACRAHRP 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG D+ ++ P + P S Y+ATK +++ + A+ H Y Sbjct: 120 A---------HLIFASSSSVYGLNDRLPYATTDPVDQPVSFYAATKRANELMAHAYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAIT-RMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 GIP YGP+ P+ + P T ++ G + +Y DG RD+ Y++D V L Sbjct: 171 GIPTTGLRFFTVYGPWGRPD-MAPFKFTDAILNGRTIDVYNDGAMSRDFTYIDDIVEGLV 229 Query: 235 LVL------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 ++ + G + YNIG + K + + I ++ + F+ + Sbjct: 230 RLIPLPPTDETGVRNKVYNIGFGSPVKLLQFI--------ECIEEALGIRAIKNFLPLQS 281 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 G D+ +++ +G+ PQ + G+ V WY D Sbjct: 282 GDVVNTWADTRELEERVGFRPQVAVPVGVQSFVDWYRD 319 >gi|289450943|gb|ADC93860.1| dTDP-glucose 4,6-dehydratase [Leptospira interrogans serovar Canicola] Length = 330 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 155/331 (46%), Gaps = 23/331 (6%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TG GFIGS L LV +++V V+ + G L+ + + F DI Sbjct: 2 ILITGADGFIGSHLTETLVRQGHEVRVFVLYNSFNSWGWLDQCPDDIKGK-FEVFSGDIR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+A+K DA+++ AA + S D +I TN+ GT +++ R Sbjct: 61 DPNGVRAAMKGC--DAVLHLAALIAIPYSYHSPDTYIDTNVKGTLNVVQAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + ST EVYG+ +E+ P SPYSA+K +D + +++ +++G PV Sbjct: 111 -DLNVSKVIHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYNSFGTPVS 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP +IP IT++ +G+ G RD+ +V+D V L Sbjct: 170 IIRPFNTYGPRQSARAVIPTIITQIAKGNRKIKLGAVHPTRDFNFVKDTVAGFIAALNSD 229 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 +GE N+G N E D V I ++ + ++ R ++ +R +A + Sbjct: 230 VCVGEVINLGSNYEISVGDTVRLIAEVMKVNVE---IESDDQRLRPEKSEVERLWA-SNQ 285 Query: 300 KIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 K K I W P+ + + GL++T+ W+ D Sbjct: 286 KAKDLINWSPEYGGRDGFKRGLSETIDWFSD 316 >gi|83950219|ref|ZP_00958952.1| hypothetical protein ISM_03955 [Roseovarius nubinhibens ISM] gi|83838118|gb|EAP77414.1| hypothetical protein ISM_03955 [Roseovarius nubinhibens ISM] Length = 336 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 165/340 (48%), Gaps = 31/340 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQ 56 ++++TG AGFIG L + L+ D V D +T ++ +LKE ++Q+ FS + Sbjct: 5 KVLITGTAGFIGFHLAQLLL-DEGFVVQGYDGMTDYYDV-TLKERRHAILNQNKAFSACE 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D+ + EF PD IV+ AA++ V S+ +I +N++GTF ++E R Sbjct: 63 GMLEDQARFDAVADEFAPDVIVHLAAQAGVRYSLENPRAYIESNVVGTFNVMEAAR---- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + K D L ST VYG+ ++ F+E + P + Y+A+K +++ + ++ H Y Sbjct: 119 ---RHKVDH--LLMASTSSVYGANEEMPFAETHKADTPLTIYAASKKANEAMGHSYAHLY 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P + YGP+ P+ + P T+ +++GS + +Y +G RD+ YV D VR + Sbjct: 174 DLPTTMFRFFTVYGPWGRPD-MAPYKFTKGILDGSTIDIYNNGDMWRDFTYVTDLVRGIR 232 Query: 235 LVLKKGRIGERYNIGGNNERK----------NIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++ GE + G++ N D V + F+ I + + ++ Sbjct: 233 GLIDAVPGGEETRVAGDSLSPAAPYRVVNIGNSDKVRLMDFI--EAIEAAAGRKAVRNYM 290 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + G D+ +K+ G+ PQ ++ G+ + V WY Sbjct: 291 PMQTGDVYATYADAELLKALTGYRPQTDIRDGMARFVAWY 330 >gi|313892787|ref|ZP_07826368.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442718|gb|EFR61129.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] Length = 365 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 28/349 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEI-----SQSNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + Y L L++I N + Sbjct: 13 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKDYRLQQIDAMSKGNKNTW 72 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + ++ D+ I ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 73 IFKKGNLADKAFIDDIFATYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 132 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAW 171 + + + S+ VYG+ + +S D NP S Y+ATK S++ L ++ Sbjct: 133 HSY---DNGESGVEHLVYASSSSVYGANKQIPYSTDHKVDNPVSLYAATKKSNELLAYSY 189 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 190 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRSGGIIKIFNYGNCKRDFTYIDDIVE 249 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG +N +D V + + ++P+ Y+ Sbjct: 250 GVSKVMCAAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSAGVLPEDYNF 309 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG D+S ++ + G+ P + GL + WY D Sbjct: 310 EEHKELVPMQPGDVPVTYADTSALEEDFGFKPNTTLREGLRRFAVWYKD 358 >gi|151220284|ref|YP_001331107.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus str. Newman] gi|150373084|dbj|BAF66344.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus str. Newman] Length = 319 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 31/331 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI + Sbjct: 1 MITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDIRE 52 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +K +Q D +++ AA V S+ N++ T LLE + + + + Sbjct: 53 YDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNNHIK-- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG L S+ P SPY+ K + L + Y IP + Sbjct: 111 -----RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAV 165 Query: 182 SNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P+ I++M E + F +GDG RD++YV D V+++ L++ Sbjct: 166 VKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIM 225 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + K IG YNIG + E+ ++ L KS H F E R G + Sbjct: 226 EHKDAIGHGYNIGTGTFTN----LLEVYRIIGELYGKSVEH----EFKEARKGDIKHSYA 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ P+ +E+GL + +DN Sbjct: 278 DISNLKA-LGFVPKYTVETGLKDYFNFEVDN 307 >gi|323698196|ref|ZP_08110108.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. ND132] gi|323458128|gb|EGB13993.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans ND132] Length = 336 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 93/335 (27%), Positives = 143/335 (42%), Gaps = 29/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L +LV D++ VL ++ S ++I S D Sbjct: 7 KILVTGSDGFIGSHLVEHLVRRGYDVRAFVLYNSFNSWGWLDESPRDIRDS--LDIFAGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +R+A+K D +++ AA + S D ++ TN+ GT +++ R Sbjct: 65 VRDPNGVRTAMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNIVQAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ +ED P SPYSATK +D + +++ + + P Sbjct: 117 ---DLGVERCVVTSTSEVYGTARFVPITEDHPLQGQSPYSATKIGADQIAMSFYNAFETP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V L N YGP +IP IT++ G+ G RD+ YV D VR V + Sbjct: 174 VSLIRPFNTYGPRQSARAVIPTVITQIANGAETIKLGALTPTRDFNYVSDTVRGFEAVTQ 233 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYA 295 +GE N+G E D I ++ A I + RP R Sbjct: 234 SDACVGEVVNVGSGFEVSIGDTARAIAEVMGADIEIVCEQERV------RPAKSEVERLF 287 Query: 296 IDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 + K K GW P+ + + GL T W+ D Sbjct: 288 AGNEKAKRLCGWEPEFGGLDGFKRGLKLTAEWFAD 322 >gi|148658167|ref|YP_001278372.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148570277|gb|ABQ92422.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 328 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 28/343 (8%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 ++VTG GFIGS L LV +++ V + G+ L+++ S++ + +++ D Sbjct: 7 VLVTGAGGFIGSHLVEALVARGFRVRAFV--RYNGRGDPGLLRDLP-SDMRAQIEIIFGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + A + D I + A + S + E + TNIIGT +LE R Sbjct: 64 LRDSHAVHEATRGV--DTIFHLGALIAIPYSYVHPRETVETNIIGTLNVLEAAR------ 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ +E+ P SPYSA+K +D LV ++ ++G+P Sbjct: 116 ---AHGVRRVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADKLVESFHLSFGVP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +IP IT+ + S V L GD + RD YV D V + Sbjct: 173 TVTVRPFNTYGPRQSARAVIPTIITQALTRSVVRL-GDLRPTRDLNYVSDTVAGFLAAAE 231 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI- 296 + + IG+ N+ N+E ++ +I L+ + + L RP + + Sbjct: 232 RDQAIGQAINLASNDEISIGELAEKIIALVGRQVTIDVDESRL------RPETSEVFRLH 285 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 D+ +GW P +++ GL +T+ W + + PL+ ++ Sbjct: 286 GDNRLAHELLGWKPLVSLDEGLRRTIDWIAQHIDRYDPLHYQV 328 >gi|85711332|ref|ZP_01042391.1| NAD dependent epimerase/dehydratase family protein [Idiomarina baltica OS145] gi|85694833|gb|EAQ32772.1| NAD dependent epimerase/dehydratase family protein [Idiomarina baltica OS145] Length = 330 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 30/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 ++++TG AGFIG + L+++ V+ ID L Y+ L + LK++ + + FSF + Sbjct: 4 KILITGAAGFIGFHTAKRLLSE-GFHVVGIDNLNDYYSVQLKYDRLKQLKKFDSFSFHSI 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + L ++ D +++ AA++ V SI + +N+IG +LE W Sbjct: 63 DIDNPIALSDCLADYTIDDVIHLAAQAGVRYSIDNPQAYGRSNLIGFLNILE----WVRS 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 D F+ S+ VYG+ ++ FS + + P S Y+ATK +++ + ++ H Y Sbjct: 119 HPVD-----HFIYASSSSVYGNTERVPFSTNATADKPVSLYAATKRANELMAESYSHLYN 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGPY P+ + P+ + I +G + +Y G RD+ +++D V +Y Sbjct: 174 IPATGLRFFTVYGPYGRPD-MAPMKFAKQIMQGGQIDVYNHGDLSRDFTFIDDIVEGIYR 232 Query: 236 VLKK----GRIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 +L K G R+ + G E N+ EI + ++ R++ + G Sbjct: 233 LLDKPIQTQSEGARHRVLNIGRGEPVNLLKFIEI-------LESAFEKPVKKRYLPMQDG 285 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +++ G+ PQ ++ESG+ K WY Sbjct: 286 DVSTTWADVTELSKITGYSPQVDIESGIQKFAEWY 320 >gi|307293718|ref|ZP_07573562.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum L-1] gi|306879869|gb|EFN11086.1| NAD-dependent epimerase/dehydratase [Sphingobium chlorophenolicum L-1] Length = 333 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 44/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN-----SLKEISQSNLFS 53 M ++VTG AGFIG A+ L++ + V ID + Y +L +L E LF+ Sbjct: 1 MTILVTGAAGFIGMAVADRLLSQGR-AVFGIDNMNDYYPVSLKRDRIAALHE-RHGGLFT 58 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++D D + +++AL + DAIV+ A++ V S++ ++ +N+ G +LE R Sbjct: 59 FAELDFADMDALQAALHDHPIDAIVHLGAQAGVRYSLINPHAYVRSNLAGHVNMLEVAR- 117 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 ++ + S+ VYG D F ED +P S Y+ATK + + + + Sbjct: 118 --------ERRVRHLVYASSSSVYGGNDSLPFRVEDRADHPVSLYAATKRADELMSETYA 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + IP+ YGP+ P+ + + ++++ G + ++ G+ RD+ Y++D V Sbjct: 170 HLFRIPMTGLRFFTVYGPWGRPDMAMWIFTSKILAGQPIPVFNHGRMQRDFTYIDDIVSG 229 Query: 233 LYLVL----------KKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + L K G G R YNIG N +++ I L DA K+ Sbjct: 230 VIGCLDHAPEDDGAAKAG--GSRSPHRLYNIGNNRPE---ELMHLISILEDACGRKAE-- 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I F +PG D S I +IG+ P +E G+ + V WY Sbjct: 283 ---IDFQPMQPGDVPATFADISAIAQDIGFAPTTGIEVGVPRFVDWY 326 >gi|240136921|ref|YP_002961388.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] gi|240006885|gb|ACS38111.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] Length = 363 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 43/347 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+G+ L L + + VLV D LT G +L +++ + + V R Sbjct: 12 VLVTGGAGFVGANLADQLAGEGQT-VLVYDALTRPGVEANLAWLTERHGARIVPVIADIR 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + AL + A+ +FAA+ V S+ E + N+ GT LLE R + Sbjct: 71 DGAELALAVREAGAVFHFAAQVAVTTSMSAPWEDMEVNLGGTLTLLEALRA--------R 122 Query: 123 KDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSATKAS 163 + L ST++VYG L D L ED P + +PY +K + Sbjct: 123 RGAVPLLFASTNKVYGGLPDVELAVEGDAYRPTDSNLRAHGVGEDRPLDFHTPYGCSKGA 182 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNV 220 +D VL + +YG+P ++ S YGP + + + R + V LYGDG+ V Sbjct: 183 ADAYVLDYARSYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALTNRTVTLYGDGRQV 242 Query: 221 RDWLYVEDHVRALYLVLKK-GRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 RD L+V D V A L + R+ G +N+GG +N ++ +G LLD + Sbjct: 243 RDILHVRDAVAAYRAALARIDRVAGRAFNLGGGPDNAVSLRGLIAYLGTLLDREVG---- 298 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I RPG R Y D+ + S +G P G+ W Sbjct: 299 ----IETGAWRPGDQRYYVSDTRRAASMLGLEPPLPWREGVADLAAW 341 >gi|261419074|ref|YP_003252756.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|319765891|ref|YP_004131392.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] gi|261375531|gb|ACX78274.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|317110757|gb|ADU93249.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] Length = 318 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 29/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL---TYAG-NLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS LC L+ + + V+ +D T A ++ + F+FL+ Sbjct: 1 MNILVTGAAGFIGSHLCEKLLENDERHVIGVDGFLGPTPAPLKAKNIAHLQSHPRFTFLE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 +D+ + + S L+ +A+ + A V R+ G + + NI T LLE Sbjct: 61 LDLLTAD-LPSLLQNV--EAVYHLAGMPGV-RTSWGTEFAAYAAHNISATQRLLE----- 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +C + K RF+ ST VYG G SE + P SPY TK + ++L + Sbjct: 112 -ACKGRPLK---RFIYASTSSVYGE-RSGPLSETLEPAPLSPYGITKLTGEHLCRVYFRE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +P+++ YGP P+ I +++ G + ++GDG RD+ Y+ D V Sbjct: 167 FAVPIVILRYFTVYGPRQRPDMSFHRFIRQLLAGQPLTVFGDGTQSRDFTYISDCVDGTI 226 Query: 235 LVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L++ G IGE NIGG ER +++ E+ LL+ L K +I++ G ++ Sbjct: 227 AALERDGVIGETINIGG-KERASVN---EVIRLLETLTGKQ----AIIQYTPAARGEPKQ 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K + + + P +E GL K + Sbjct: 279 TWADLTKAERLLEYKPVVTLEGGLQKEI 306 >gi|5814300|gb|AAD52168.1|AF144879_7 unknown [Leptospira interrogans] Length = 332 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 31/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNS---LKEISQS--NLFSFL 55 +++VTG GFIGS L LV + +++ V Y + N+ L S F Sbjct: 3 KILVTGADGFIGSHLTEALVRSGFEVKAFV-----YYNSFNTWGWLDYCSDDVRGKFEIF 57 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R+A+K DA+++ AA + S D +I TNI GT +L+ R Sbjct: 58 TGDVRDPNGVRTAMK--GTDAVLHLAALIGIPYSYHSPDTYIDTNIKGTLNVLQAAR--- 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + ST EVYG+ +E+ P SPYSA+K +D L ++ ++ Sbjct: 113 ------DLNLSKVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSF 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 PV++ N YGP +IP IT+++ G G RD+ +V D V Sbjct: 167 STPVIIVRPFNTYGPRQSARAIIPTVITQLLSGKTKVQLGSTSPTRDFNFVTDTVNGFIS 226 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LK K GE NIG E D V I ++ I + S + IR ++ +R + Sbjct: 227 ALKSKQGFGEVINIGNGFEISVGDTVKLIANIIGKEI-EIVSDSNRIR--PEKSEVERLW 283 Query: 295 AIDSSKIKSEIGWFPQEN----MESGLNKTVCWY 324 A + K K + W P N GL +T+ W+ Sbjct: 284 A-SNQKAKDLLNWQPAYNGLQGFRKGLEETIEWF 316 >gi|319949389|ref|ZP_08023456.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4] gi|319436946|gb|EFV91999.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4] Length = 312 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 154/332 (46%), Gaps = 26/332 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-NLFSFLQVDI 59 MR +VTGGAGFIGS L L+ + V V+D L+ G L +L ++ + F F Q+D+ Sbjct: 1 MRALVTGGAGFIGSTLVDRLLGEGH-DVTVVDNLSR-GRLENLAAAREAGDRFVFHQLDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I + + +P+ I + AA+ V S+ N++GT L E R Sbjct: 59 TD-PAIEDVVAQARPEVIFHLAAQIDVRLSVEDPVHDAEVNVVGTVRLAEAAR------- 110 Query: 120 QDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R + S+ +YG + + +E P +P SPY+A K + + + + YGI Sbjct: 111 --KAGVRRIVFTSSGGSIYGPVTELPVAETRPVDPLSPYAAGKVAGEIYLEMFSRLYGIE 168 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +N YGP P ++ + R++ G ++GDG N RD+++V+D V A Sbjct: 169 WAGVAPANVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVVDAFVR 228 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G R+N+G E + L L+ ++ + + R G R Sbjct: 229 AAEVPAAAGLRFNVGTGVETTDRG--------LHTLVAEAAGAADDPEYAPARLGDVARS 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 A+D+ + +GW PQ + G+ +TV ++ D Sbjct: 281 ALDAGRAAEVLGWVPQVTIREGVARTVDYFRD 312 >gi|289451218|gb|ADC94132.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Hebdomadis] Length = 332 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 31/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNS---LKEISQS--NLFSFL 55 +++VTG GFIGS L LV + +++ V Y + N+ L S F Sbjct: 3 KILVTGADGFIGSHLTEALVRSGFEVKAFV-----YYNSFNTWGWLDYCSDDVRGKFEIF 57 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R+A+K DA+++ AA + S D +I TNI GT +L+ R Sbjct: 58 TGDVRDPNGVRTAMK--GTDAVLHLAALIGIPYSYHSPDTYIDTNIKGTLNVLQAAR--- 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + ST EVYG+ +E+ P SPYSA+K +D L ++ ++ Sbjct: 113 ------DLNLSKVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSF 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 PV++ N YGP +IP IT+++ G G RD+ +V D V Sbjct: 167 STPVIIVRPFNTYGPRQSARAIIPTVITQLLSGKTKVQLGSTSPTRDFNFVTDTVNGFIS 226 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 LK K GE NIG E D V I ++ I + S + IR ++ +R + Sbjct: 227 ALKSKQGFGEVINIGNGFEISVGDTVKLIANIIGKEI-EIVSDSNRIR--PEKSEVERLW 283 Query: 295 AIDSSKIKSEIGWFPQEN----MESGLNKTVCWY 324 A + K K + W P N GL +T+ W+ Sbjct: 284 A-SNQKAKDLLNWQPAYNGLQGFRKGLEETIEWF 316 >gi|284165444|ref|YP_003403723.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284015099|gb|ADB61050.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 353 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 28/324 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS R+L + +L + N+N + +IS + DI D Sbjct: 42 RILVTGGAGFIGSNFARWLAPHAHVTILDDFRSGSRDNINDIDDIS------VIDGDIRD 95 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +A+++ D +V+ AA + V R++ + + N+ GT +LE + Sbjct: 96 AGLVANAVRD--QDVVVHMAAMAGVQRTLDNPVDTLEVNVEGTRTVLE---------AAV 144 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R L ST E+YG L + + ED P P + Y+ KA ++ V ++ GIP + Sbjct: 145 EASVDRVLFTSTSEMYGDLFEPPYREDGPIAPKTNYAVAKAVNERYVKSYCEAAGIPYTI 204 Query: 182 SNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YGP ++P + R + + +YG G+ RD+ Y++D + A L Sbjct: 205 LRYFNVYGPNQDGSTDGYVVPKFVRRALADDSIPVYGSGEQTRDFTYIDDALDATIRSLG 264 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 E +N+G E I F D + HTE + RP R D Sbjct: 265 PAGRNETFNVGTGYE---CSIRRLAEFAADVVGRGHIIHTE-----DPRPYRVERRCADI 316 Query: 299 SKIKSEIGWFPQENMESGLNKTVC 322 +K + +G+ P+ + G+ K Sbjct: 317 TKARGVLGYAPRTPLPDGIAKVAA 340 >gi|153007033|ref|YP_001381358.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152030606|gb|ABS28374.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 373 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 31/335 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +++TG AGFIGS + R L+ D +V +D L Y +L L ++ F F D Sbjct: 45 IVLTGCAGFIGSHVARRLLRDGH-EVSGLDNLNDYYDPSLKRARLALLAPERGFRFTAAD 103 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + L E +P+ +V+ AA+ V S+ + TN+ G F +L+ C Sbjct: 104 VADREALDAVLDEAEPEYVVHLAAQVGVRNSVRNPRAYAETNLDGFFNVLD------GCA 157 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ VYGS +K FSE+ P + P S Y+ATK +++ + A+ H + Sbjct: 158 RRGVR---HLVYASSSSVYGSNEKVPFSEEDPVDHPISFYAATKKANEIMAHAYSHLNRL 214 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P YGP+ P+ + P+ R I G + L+ G+ +RD+ YV+D V + + Sbjct: 215 PTTGLRFFTVYGPWGRPD-MAPILFGRAILRGEPITLFNHGRMLRDFTYVDDVVEVVTAL 273 Query: 237 LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + + E N+G + + V A++ + L ++ +PG Sbjct: 274 VPRPPEPEDAAPYRVLNVGNDRPVALEEFV--------AILERHLGRPALRKYAPMQPGD 325 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D ++++ +G+ P+ +E GL + W + Sbjct: 326 VPATWADVRRLQATVGFVPRTPIEEGLRRMTEWLV 360 >gi|295695831|ref|YP_003589069.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] gi|295411433|gb|ADG05925.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] Length = 329 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 140/330 (42%), Gaps = 24/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTG AGFIGS + LV +++ V + G L L Q L + D+ Sbjct: 8 VLVTGAAGFIGSHVTELLVRRGARVRPFVRYNSTRNLGWLAHLDPAIQQEL-DVVAGDLG 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + A + + I + A + S E + TN+IGT +L R Sbjct: 67 DAEAVLQAAQGME--VIFHLGAMISIPYSYAHPREVVETNLIGTLNILTAAR-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST EVYG+ E+ P SPYSA+K +D L ++ +Y +PV+ Sbjct: 117 -DLGVRRVIHTSTSEVYGTARFVPIDENHPLQGQSPYSASKIGADKLAESFFCSYELPVV 175 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YGP +IP + + + + L GD RD+ YV D + Sbjct: 176 TVRPFNAYGPRQSLRAVIPTILVQALTRDRIQL-GDLSTKRDFTYVVDTAAGFVRAAEVD 234 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAID 297 +GE +NIG E D+V E+ + +P L RP RR D Sbjct: 235 EAVGEVFNIGSGREITIGDLVEEVFSITGRRLPVEQEAKRL------RPTRSEVRRLWAD 288 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SSK +GW PQ ++ GL +T+ W D+ Sbjct: 289 SSKAARILGWRPQVDLREGLERTLAWVNDH 318 >gi|282163533|ref|YP_003355918.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282155847|dbj|BAI60935.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 306 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 31/325 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGG G +GS LC LV I V +ID L+ N S++N F++ DI D Sbjct: 4 RILLTGGLGQVGSYLCEELVQRGNI-VTIIDNLSSTVN----PYPSEAN---FVKGDIRD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ DA+++ AA+ +V RS+ NIIGT LL R Sbjct: 56 ASTV--SILMHSADAVIHCAAQIYVSRSMEDPLFDAQNNIIGTLNLLNAAR--------- 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K D RF+ S+ YG + E P P SPY A+K + + L + YG+P + Sbjct: 105 KADIKRFVYFSSAATYGDPVRLPVDESHPQEPLSPYGASKLAGEKYALMFHRAYGLPSTV 164 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N Y P P I++ ++ G ++GDG RD++ V D V + L+L Sbjct: 165 IRPFNIYSPRQDPSNPYSGVISKFMDSVSKGKPPVIFGDGSATRDFVSVHDVVNMVMLML 224 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IG+ +N G + + + E+ ++ L K EL + +RPG + Sbjct: 225 ENSAAIGKAFNCGAGTKTR----IDELARMVIRLYGKDSMRPEL---LPERPGDIKDSYA 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTV 321 D + + +G+ P+ + +GL + V Sbjct: 278 DITLARDILGYSPKITLSAGLKEIV 302 >gi|288959040|ref|YP_003449381.1| NAD-dependent epimerase/dehydratase [Azospirillum sp. B510] gi|288911348|dbj|BAI72837.1| NAD-dependent epimerase/dehydratase [Azospirillum sp. B510] Length = 328 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 147/341 (43%), Gaps = 37/341 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIGS + L+ D QVL ID L YA L L ++ F FL+ Sbjct: 1 MTILVTGAAGFIGSHVAAALL-DRGEQVLGIDNLNDYYAVPLKEARLARLTGRPGFRFLK 59 Query: 57 VDICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ DR + F +V+ AA+ V SI ++ N+ G LLE R Sbjct: 60 ADVADRATVEGLWPRFDDVTGVVHLAAQPGVRYSIENPYAYVDANVTGQVTLLEAARRMP 119 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 F+ ST VYG+ K FS ED +P S Y+ATK +++ L + H Sbjct: 120 GLR--------HFVYASTSSVYGANRKMPFSVEDRVDSPVSVYAATKKAAEMLAFTYSHL 171 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P+ YGP+ P+ L + G + ++ G+ RD+ Y++D V + Sbjct: 172 YQLPMTGLRFFTVYGPWSRPDMATWLFADAIAAGRPIRVFNGGKMKRDFTYIDDIVAGVL 231 Query: 235 LVLKK--------GRIGERYNIGGN--NERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 L + G +N+G N E V E F E ++ + Sbjct: 232 AALDRPAPVDAETGAPHRVFNLGNNRCEELMRFITVLEQAF-----------GREAVKVM 280 Query: 285 ED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E + G + A D + +G+ P+ +E+GL + V WY Sbjct: 281 EPMQAGDVQETAADIELSRQVLGFEPKTPIETGLPRFVEWY 321 >gi|222525151|ref|YP_002569622.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|222449030|gb|ACM53296.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 342 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIG L YL+ + V ++D L+ NL L+E S L F+Q DI Sbjct: 7 LITGGAGFIGCNLADYLLARGE-HVTIVDNLSRPRTPLNLAWLQERYGSRL-RFVQADIR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +++ + + + + A + V S+ N +GT +LE RL Sbjct: 65 DAAVMQAVIPGHR--VVYHLAGQVAVTTSVQDPRSDFEINALGTLNILEAARL------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED--------MPYNPS--------SPYSATKASS 164 + F ST++VYG ++ ED +P+ SPY +K ++ Sbjct: 116 ASEPPIVFFA-STNKVYGGMETVAVVEDETRYRYRDLPHGVPEHQLLDFHSPYGCSKGAA 174 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNV 220 D V + YG+ ++ S YGP F + AI ++ + +YG+G+ V Sbjct: 175 DQYVRDYARIYGLKTVVFRQSCIYGPRQFGVEDQGWAAHFAIAALLN-RPITIYGNGKQV 233 Query: 221 RDWLYVEDHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 RD LYV+D + A L + GRI YNIGG + + I E G LL LI + Sbjct: 234 RDMLYVDDLIAAYMAALDRIDQVSGRI---YNIGGGPQ-NALSIWAEFGPLLSRLIGREI 289 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R+ + RPG Y D S + ++ W PQ ++ G+ + V W D+ Sbjct: 290 P----VRYGDWRPGDQPVYISDISLAQRDLAWQPQVSVYEGVERMVGWIRDH 337 >gi|298706193|emb|CBJ29234.1| imm downregulated 26 [Ectocarpus siliculosus] Length = 504 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 26/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-------TYAGNLNSLKEISQSNLFSFL 55 ++VTG AGFIGS + L+ V+++D++ T N+ L E N F Sbjct: 90 VLVTGAAGFIGSWVADTLLARGD-DVVIVDEVNSYYDVRTKRSNVAMLLEKYGPNRVKFF 148 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+CD I + + +V+ AA + V SI ++ +N+ T LLE +RL Sbjct: 149 EGDLCDAPFITRIFETEGVEWVVHMAARAGVRPSIEDPFVYVHSNVEATTRLLELSRLHG 208 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 S+ VYG K +FSE D+ P SPY+ATK S + + + H Sbjct: 209 VKSFV---------FASSSSVYGGSQKEVFSEKDVVDFPVSPYAATKKSCELMAHTYSHL 259 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+ + YGP P+ I + G + +GDG RD+ Y+ D V + Sbjct: 260 YGLNIAGLRFFTVYGPRGRPDMAPYKFIDLVARGQEIMQFGDGSTSRDYTYISDIVDGVV 319 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L + + YN+G N V F+ L+ KS IR ++PG R Sbjct: 320 RSLDRPAGYQIYNLG------NGSPVSLSSFI--KLVEKSVGTPAKIRVCPEQPGDVPRT 371 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK ++ +G+ P G++KTV WY Sbjct: 372 CADISKARAMLGYNPSVAFADGIDKTVGWY 401 >gi|294013119|ref|YP_003546579.1| putative NAD-dependent epimerase/dehydratase [Sphingobium japonicum UT26S] gi|292676449|dbj|BAI97967.1| putative NAD-dependent epimerase/dehydratase [Sphingobium japonicum UT26S] Length = 331 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 42/346 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSN--LFSF 54 M ++VTG AGFIG A+ L+++ + V ID + Y +L + + + Q + LF+F Sbjct: 1 MTILVTGAAGFIGMAVADRLLSEGR-AVFGIDNMNDYYPVSLKRDRIAALHQRHGGLFTF 59 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++D D + +++AL + DAI++ A++ V S++ ++ +N+ G +LE R Sbjct: 60 AELDFADMDALQAALHDHPVDAIIHLGAQAGVRYSLINPHAYVRSNLAGHVNMLEVAR-- 117 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ + S+ VYG D F ED +P S Y+ATK + + + + H Sbjct: 118 -------ERRVRHLVYASSSSVYGGNDTLPFRVEDRADHPVSLYAATKRADELMSETYAH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP+ YGP+ P+ + + ++++ G + ++ G+ RD+ Y++D V + Sbjct: 171 LFRIPMTGLRFFTVYGPWGRPDMAMWIFTSKILSGQPIPVFNHGRMQRDFTYIDDIVSGV 230 Query: 234 YLVL----------KKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L K G G R YNIG N + + ++ +++ ++ Sbjct: 231 IGCLDHAPEDDGAAKAG--GSRSPHRLYNIGNNRPEELMHLI--------SVLEEACGRK 280 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I F +PG D S I +IG+ P +E G+ + V WY Sbjct: 281 AEIDFQPMQPGDVPATFADISAIAQDIGFAPTTGIEVGVPRFVDWY 326 >gi|153006071|ref|YP_001380396.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152029644|gb|ABS27412.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 354 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 156/356 (43%), Gaps = 61/356 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L + +VL++D L+ G +L ++LQ + DR Sbjct: 7 VLITGGAGFIGSNLADRLARAGE-RVLLLDDLSRPGVARNL---------AWLQAEHGDR 56 Query: 63 ---------ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + A + ++ + AA+ V S+ N GT +LE R Sbjct: 57 IDLERADVRDAAAVARAAREATSVFHLAAQVAVTTSLEDPVGDFEVNARGTLNVLEAVR- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLD--------------------KGLFSEDMPYNP 153 + + L ST++VYG+L+ +G+ SE P Sbjct: 116 -------GRSEPPPLLFTSTNKVYGALEDLALVRNGDRYGPPAGSPYARGV-SEARPVEF 167 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSH 210 SPY +K ++D VL W T+G+P ++ S YGP+ + + + + G Sbjct: 168 HSPYGCSKGAADQYVLEWARTFGVPAVVFRMSCIYGPHQHGNEDQGWVAHLLRAALRGDT 227 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERK-NIDIVFEIGFLL 267 V +YGDG+ VRD L+VED V A L R GE +N+GG + ++ + ++ L Sbjct: 228 VTIYGDGRQVRDVLFVEDLVDAFLLARGGARKLAGEAFNVGGGPDHTLSLLELVDLIEAL 287 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D PK + F R R Y D+SK+++ GW P+ + G+ + W Sbjct: 288 DGERPK-------VTFSGWRVADQRWYVSDTSKLRAVTGWAPRVPVAEGIGRLHAW 336 >gi|253575887|ref|ZP_04853221.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844681|gb|EES72695.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. oral taxon 786 str. D14] Length = 315 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 33/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIG + + L+ D Q+ ++D L+ N + L F++ I Sbjct: 1 MNILLTGGAGFIGRWVAKKLLEDGH-QLWILDDLSNGREANLQEFQGHPGLKQFIRGTIL 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + Q D + A +V SI + +GTF +LE+ R + + Sbjct: 60 DEPLLEELFAAHQFDICYHLGASINVQDSIDDPRTTFNNDTVGTFYILEQCRRYNT---- 115 Query: 121 DKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + +ST VY D+ +E P P+SPY+ K +++ +VL++ + YG+P Sbjct: 116 ------KVVFMSTCMVYDRCTDETGITELHPTKPASPYAGAKVAAENMVLSYYYAYGLPT 169 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ N YGP+ ++ + + ++G + +YG+G RD LYVED V Sbjct: 170 VVIRPFNTYGPFQKTGGEGGVVAIFLKNDLDGKELRIYGEGTQTRDLLYVEDCAN---FV 226 Query: 237 LKKGRIGERYNIGGNNERKNI----DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 + G Y+ N E N DI L+ A P H E I P + Sbjct: 227 VSAG-----YSDAVNGEIVNAGLGRDITINDLALMIAGDPSRIRHVEHI-----HPQSEI 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ +S K K +GW P+ +E G+ +T W Sbjct: 277 QKLLCNSEKAKRLLGWEPRVTLEEGIARTREW 308 >gi|126464833|ref|YP_001041809.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332561381|ref|ZP_08415696.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N] gi|126106648|gb|ABN79173.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332274180|gb|EGJ19497.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N] Length = 334 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 51/352 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R++VTG AGFIG L R L+ + +V D +T Y L + + Q FS + Sbjct: 3 RILVTGTAGFIGFHLARLLLAE-GFRVHGYDGMTDYYDVALKRRRHAMLLQDPNFSATEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ EF P+ IV+ AA++ V S+ ++ N+IG+F ++E R Sbjct: 62 MLEDQALFDRVADEFAPEVIVHLAAQAGVRYSVENPRAYLDANVIGSFSVMEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + + ST VYG+ +E+MP+ + + Y+ATK +++ + A Sbjct: 117 ----RLKVAHLMMASTSSVYGA------NEEMPFRETDKADRQLTIYAATKKANESMGHA 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 W H +G+P+ + YGP+ P+ + + ++E + +Y G+ RD+ YV+D V Sbjct: 167 WAHVHGLPITMFRFFTVYGPWGRPDLALFRFVEAILEDRPIEIYNHGEMWRDFTYVDDLV 226 Query: 231 RALYLVLKKGRIGER----------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 RA+ L+++ G NIG +++ + +D V I L +S Sbjct: 227 RAIRLLIEAVPGGPETAVEEDSLSPAAPFRIVNIGNSDKVRLLDFVEAIEESLGRRAIRS 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 Y + + D P D+ ++ G+ PQ ++ G+ + V WY D Sbjct: 287 YLPMQ----VGDVPA----TWADAGLLQRLTGYRPQTDIRDGIAQFVSWYRD 330 >gi|88860035|ref|ZP_01134674.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] gi|88818029|gb|EAR27845.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] Length = 332 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/350 (26%), Positives = 164/350 (46%), Gaps = 44/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L + QV+ +D L A L LK + F+F++ Sbjct: 1 MKYLVTGAAGFIGNFVSERLCA-MGHQVIGLDNLNDYYDPALKLARLKRLEHFTNFTFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + Q + +++ AA++ V SI +I +N++G +LE R Sbjct: 60 MDLADREAIANLFATEQFERVIHLAAQAGVRYSIENPMAYIDSNLVGMATILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG+ K F+E D P S Y+ATK S++ + + H Y Sbjct: 116 ----HNKVQ-HLVYASSSSVYGANTKIPFAEEDRVDYPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P T I + ++ +G+ RD+ Y++D V + Sbjct: 171 SLPTTGLRFFTVYGPWGRPD-MAPFLFTDAIANDKPIKVFNNGKMQRDFTYIDDIVEGII 229 Query: 235 LV-------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + + + YNIG N + +++ I + +AL K+ Sbjct: 230 RIQDVIPAPNKQADNKQAVNKAEGSPFYKLYNIGNN---QPVELEQFITCIENALGKKA- 285 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + +++ + G R D S ++SEIG+ P +++SG+N V WY+ Sbjct: 286 ----IKQYLPMQDGDVVRTFADVSGLESEIGFKPNTDLQSGINSFVQWYI 331 >gi|157736911|ref|YP_001489594.1| NAD-dependent epimerase/dehydratase family protein [Arcobacter butzleri RM4018] gi|157698765|gb|ABV66925.1| NAD-dependent epimerase/dehydratase family protein [Arcobacter butzleri RM4018] Length = 363 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 96/374 (25%), Positives = 169/374 (45%), Gaps = 71/374 (18%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSL---KE 45 M+++VTG AGFIGS L L +ND Q + +L G +N++ K Sbjct: 1 MKILVTGTAGFIGSHLAIKLLERGDEVVGLDNINDYYDQNVKYGRLQRTGIINNIEDGKN 60 Query: 46 ISQSNL--------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 I L + F+++++ D+ + + + DA+ N AA++ V S+ D ++ Sbjct: 61 IPYGKLITSITNPKYKFIKINLEDKNSMMKLFETEKFDAVCNLAAQAGVRYSLTNPDAYM 120 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY------ 151 +NIIG +LE +C + K+ S+ VYG +E++P+ Sbjct: 121 DSNIIGFMNILE------ACRHNNVKN---LSYASSSSVYG------LNEELPFSTNHNV 165 Query: 152 -NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 +P S Y+A+K S++ + + H +GI YGP+ P+ + L +EG+ Sbjct: 166 DHPISLYAASKKSNELMAHTYSHLFGISTTGLRFFTVYGPWGRPDMALFLFTKAALEGNK 225 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNN 252 + ++ +G+ +RD+ Y++D V + V+ G+ GE YNIG NN Sbjct: 226 IDVFNNGEMLRDFTYIDDIVEGVIRVIDNPAKSDKNWNGKTGETSTSSAPYKIYNIGNNN 285 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 K +D + I L +I K+ + D P YA D S + +G+ P Sbjct: 286 PVKLMDFINAIENKLGKIIEKNMMPIQA----GDVPA---TYA-DVSDLVENLGYKPATP 337 Query: 313 MESGLNKTVCWYLD 326 ++ G++ V WYL+ Sbjct: 338 IQKGVDNFVDWYLE 351 >gi|289642064|ref|ZP_06474217.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289508137|gb|EFD29083.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 326 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 147/335 (43%), Gaps = 26/335 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DIC 60 +VTG GFIG L LV +V + G SL E ++ ++V D+ Sbjct: 6 LVTGAGGFIGGHLAAALVCG-GSRVRAFLRYNSRGERGSL-EWHDQHVVRDMEVVFGDLR 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A+ D + + A+ + S + A +F TN++GT + E + Sbjct: 64 DVESVQRAVS--GADVVFHLGAQIAIPYSYVNARDFFETNVLGTLNVAE---------AA 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST EVYG+ +E+ P SPY+A+K D L+ A+ ++ +PV Sbjct: 113 LRAGVGRVVHTSTSEVYGTARTAPMTEEHPLTAQSPYAASKTGGDQLMGAFHRSHQLPVT 172 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 + N YGP+ + IT+ + G + L G+ RD +V D V L Sbjct: 173 VLRPFNTYGPHQSARAVTTTVITQALAGGTLRL-GELDTRRDLTFVSDTVAGFLAAAQSD 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 +G ++G ++ ++V +G LL + + T L RP H R + Sbjct: 232 AAVGRTVHLGTGHDVSVAELVTAVGDLLGRKLTVNVDETRL------RPPHSEVARLVSN 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + +GW PQ ++++GL T+ W N +R Sbjct: 286 PALARELLGWAPQVDLDAGLTATIGWIKSNMSRFR 320 >gi|291520140|emb|CBK75361.1| Nucleoside-diphosphate-sugar epimerases [Butyrivibrio fibrisolvens 16/4] Length = 326 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 150/337 (44%), Gaps = 35/337 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSFLQV- 57 +++VTG GFIGS +LV +L + + Y + N+ L + +S + ++V Sbjct: 3 KVLVTGSDGFIGS----HLVEELVKKGYEVKAFVYYNSFNNWGWLDTLDKS-IMDHVEVF 57 Query: 58 --DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R A+K DA+ + AA + S D ++ TNI GT +L+ R Sbjct: 58 AGDVRDPNGVREAMKGC--DAVFHLAALIAIPFSYHSPDAYVDTNIKGTLNILQAARDLG 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R L ST EVYG+ E PY SPYSATK +D L ++ ++ Sbjct: 116 TK---------RVLVTSTSEVYGTAQYVPIDEKHPYQGQSPYSATKIGADRLAESFYRSF 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV + N +GP +IP IT+++ G G RD+ YV+D Sbjct: 167 DLPVTIVRPFNTFGPRQSARAVIPTIITQLLAGKEEIKLGSLTPTRDFNYVKDTAAGFIA 226 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-- 292 + + + IG+ NI E IG L + LI + + ++I EDR ++ Sbjct: 227 MYESDKTIGQEINIATQKE-------ISIGQLAEELIHQINPNAKII-CDEDRLRPEKSE 278 Query: 293 --RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + KI W PQ E GL +T+ + N Sbjct: 279 VNRLLGSNQKILQLTDWKPQYTFEQGLAETIEFLRHN 315 >gi|269837187|ref|YP_003319415.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] gi|269786450|gb|ACZ38593.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] Length = 319 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+ V+ +D G ++ + + F+ ++ D+ Sbjct: 1 MRILVTGGAGFIGSHLCDALLA-AGHDVIAVDNFI-TGRRANVAHLMEHPRFTLVEHDVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A+ + + + E N +GT LL L+Q Sbjct: 59 EP-------LDIEADQIYHLASPASPEGYMRHPIETHLVNSVGTLNLLR--------LAQ 103 Query: 121 DKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R L ST E YG + + P P S Y +K + + + + Y Sbjct: 104 --RSGARLLFTSTSEAYGDPLVHPQPETYWGNVNPIGPRSCYDESKRFGESITMEFIRRY 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + N YGP + P+ +++P I R + G + ++GDG R YV D VR L Sbjct: 162 DLDARIVRIFNTYGPRNDPQDGRVVPNFIMRALRGEPLPIFGDGSQTRSLCYVSDLVRGL 221 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L +++ G+ N+G +ER +++ I L D S S E F+E RP Sbjct: 222 ILAMERDEARGQVINLGNPDERTVLELAQIILDLCD-----SPSEVE---FLEKRPDDPE 273 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D ++ ++ +GW P +++ GL +T+ ++ Sbjct: 274 RRCPDITRARTLLGWEPTVSIDDGLRETIAYF 305 >gi|212639920|ref|YP_002316440.1| nucleoside-diphosphate-sugar epimerase [Anoxybacillus flavithermus WK1] gi|212561400|gb|ACJ34455.1| Nucleoside-diphosphate-sugar epimerase [Anoxybacillus flavithermus WK1] Length = 314 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 27/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTG AGFIGS +C L+ V+ ID L ++K+ + L ++ + Sbjct: 1 MNILVTGAAGFIGSHVCEALLPHH--HVIGIDSLI-GPTPKAMKQKTVETLNTYDRFTWI 57 Query: 61 DRECIRSALKEF--QPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEETRLWWS 116 + + + L + Q D I +FA V R+ G D + T NI+ T LLE + Sbjct: 58 EGDLLSLPLDDIVQQVDVIYHFAGMPGV-RTSWGTSFDLYTTNNILATQRLLE------A 110 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C K +F+ ST +YG + G E+ P P SPY TK + ++L + + Sbjct: 111 CKQHRPK---QFIYTSTSSIYGETN-GRVHENTPPTPLSPYGMTKLAGEHLCRIYESAFH 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ + YGP P+ I +M+ + ++GDG RD+ Y+ D V V Sbjct: 167 VPITILRYFTVYGPRQRPDMAFHRFIRQMLFDEPITIFGDGTQTRDFTYISDCVNGTLAV 226 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L + IGE +NIGG ER +++ V +L+ I K +++ G + Sbjct: 227 LGNEKAIGETFNIGG-KERASVNDVIA---MLETFIGKQAKK----QYVNQAIGEPKHTW 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTV 321 D SK ++ + + P ++ GL + V Sbjct: 279 ADISKAENMLAYAPNVPLQEGLRREV 304 >gi|315194584|gb|EFU24973.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus aureus subsp. aureus CGS00] Length = 323 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 159/333 (47%), Gaps = 31/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK--IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TGGAGFIGS +LV+DL+ V V+D G ++K ++ ++F ++DI Sbjct: 3 KVLITGGAGFIGS----HLVDDLQQDYDVYVLDNYR-TGKRENIKSLADDHVF---ELDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + +K +Q D +++ AA V S+ N++ T LLE + + S + Sbjct: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLKLLETIKKYNSHIK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG L S+ P SPY+ K + L + Y IP Sbjct: 115 -------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P+ I++M E + F +GDG RD++YV D V+++ L Sbjct: 168 AVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRL 227 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ K +G YNIG +++ IG L KS H F E R G + Sbjct: 228 IMEHKDAVGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEHD----FKEARKGDIKHS 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S +K+ +G+ + +E+GL + +DN Sbjct: 280 YADISNLKA-LGFVTKYTVETGLKDYFNFEVDN 311 >gi|282601243|ref|ZP_05981178.2| NAD-dependent epimerase/dehydratase family protein [Subdoligranulum variabile DSM 15176] gi|282569665|gb|EFB75200.1| NAD-dependent epimerase/dehydratase family protein [Subdoligranulum variabile DSM 15176] Length = 322 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 19/327 (5%) Query: 4 IVTGGAGFIGSALCRYLVN-DLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +VTG GFIGS L LV K++ + + G +++L ++ + F+ D+ D Sbjct: 1 MVTGADGFIGSHLTEELVKRGEKVRAFCLYNSFGSLGWIDTLPPEIKNEIDIFMG-DVRD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R+A+ + + + AA + S D ++ TNI GT +L R + Sbjct: 60 PNGVRTAMH--GQERVFHLAALIAIPFSYHSPDSYVDTNIKGTLNVLNAARELGTQ---- 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L ST EVYG+ E P+ SPYSATK +D L ++ ++ +PV + Sbjct: 114 -----RVLVTSTSEVYGTAQYVPIDEKHPFQGQSPYSATKIGADRLAESFYRSFDLPVTI 168 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KG 240 N YGP +IP IT+++ G G RD+ YV+D + Sbjct: 169 VRPFNTYGPRQSGRAIIPTIITQLLAGQTEIKLGSLTPTRDFNYVKDTANGFMTIADCDA 228 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IG+ NI E D+ E L+ + P + E R ++ +R D++K Sbjct: 229 AIGQELNIATGVEHSIGDLAHE---LIAQINPNATIVCEAERLRPEKSEVNRLLG-DATK 284 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDN 327 +++ GW PQ E GL +T+ + N Sbjct: 285 LRNLTGWAPQYTFEQGLAETIEFLRGN 311 >gi|188580531|ref|YP_001923976.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179344029|gb|ACB79441.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 368 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 97/350 (27%), Positives = 156/350 (44%), Gaps = 49/350 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV--DIC 60 +++TGGAGF+G+ L L + + V+V D L AG +L +S+ + + V DI Sbjct: 15 ILITGGAGFVGANLADRLAAEGRT-VIVYDALARAGVERNLAWLSERHGDRIVPVIADIR 73 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + A ++ A+ +FAA+ V S+ + + N+ GT LLE R Sbjct: 74 DRDELARAARDV--GAVFHFAAQVAVTTSLTAPRDDMEVNLGGTLNLLEALRA------- 124 Query: 121 DKKDQFRFLQISTDEVYGSL--------------------DKGLFSEDMPYNPSSPYSAT 160 + + L ST++VYG L ++G+ ED P + +PY + Sbjct: 125 -RGEAVPLLFASTNKVYGGLPDVSLSLAGEAYLPEDPRLRERGI-GEDRPLDFHTPYGCS 182 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K ++D VL + TYG+P ++ S YGP + + + R ++G + YGDG Sbjct: 183 KGAADAYVLDYARTYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALKGEPITFYGDG 242 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGN--NERKNIDIVFEIGFLLDALIPK 273 + VRD L+V+D V A L + R+ G +N+GG N ++ G LL I Sbjct: 243 RQVRDILHVDDCVAAYRAALARIDRVAGRAFNLGGGPANAVSLRGLIAHAGQLLGRDI-- 300 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I RPG R Y D S+ +G G+ + W Sbjct: 301 ------TIETGPWRPGDQRYYVSDPSRAIEALGLERPLPWREGVAQLAGW 344 >gi|255262196|ref|ZP_05341538.1| UDP-glucuronate 5'-epimerase [Thalassiobium sp. R2A62] gi|255104531|gb|EET47205.1| UDP-glucuronate 5'-epimerase [Thalassiobium sp. R2A62] Length = 337 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 44/349 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVD 58 +++TG AGFIG L + L+ D+ +V+ D ++ Y +L + + Q+ FS ++ Sbjct: 4 VLITGTAGFIGFHLAKVLL-DMGHRVVGFDGMSDYYDVDLKKRRHQILLQNANFSCVEGQ 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + + + + +PD IV+ AA++ V S+ ++ TN+IGTF ++E C Sbjct: 63 LEDFDALHDLMMDAKPDVIVHLAAQAGVRYSLENPRAYVNTNLIGTFNVME-------CA 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + D L ST VYG+ + ++E + P + Y+ATK +++ + ++ H + + Sbjct: 116 RELGVDHL--LMASTSSVYGANTQMPYAETHKADLPMTIYAATKKANEAMGHSYAHLHNL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + YGP+ P+ + P T+ ++EG + +Y G RD+ YVED VR + L+ Sbjct: 174 PVTMFRFFTVYGPWGRPD-MAPHKFTKGILEGHEIDIYNHGDMYRDFTYVEDLVRGIGLL 232 Query: 237 LKKGRIGER-------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + + NIG + + + +D + I DA K+ + Sbjct: 233 VDVPPVRPETAEDIEEGDSLSPVAPFRVVNIGNSEKVRLLDFIEAIE---DAAGVKAKRN 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ +PG D+S +K G+ P N+ G K V WY D Sbjct: 290 -----YMDMQPGDVPATWADASLLKRLTGYSPNTNIRDGAAKFVAWYRD 333 >gi|221069655|ref|ZP_03545760.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni KF-1] gi|220714678|gb|EED70046.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni KF-1] Length = 336 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 43/346 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVD 58 +++TG AGFIG + L+ + + V+ ID L A L E+ F F+++D Sbjct: 4 VLITGCAGFIGMHCAKRLL-EQGVPVVGIDNLNNYYDVALKHARLAELRPHAHFRFVELD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ + + P +++ AA++ V SI D++ +N++G + + L Sbjct: 63 LAERQGMADLFAKVAPGKVLHLAAQAGVRYSIDQPDDYTDSNLLG----------FGNVL 112 Query: 119 SQDKKDQFRFL-QISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +K Q L S+ VYG K F+E D +P S Y+ATK +++ + ++ H YG Sbjct: 113 QGCRKHQIEHLVYASSSSVYGGNTKMPFAESDAVDHPISYYAATKKANELMAHSYAHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + M+ G + +YG+G+ VRD+ Y++D V + V Sbjct: 173 IPTTGLRFFTVYGPWGRPDMALFKFTKAMLAGESIDVYGEGKLVRDFTYIDDIVEGIMRV 232 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L K + +NIG N +D + A + + T Sbjct: 233 LDKPATPDASYDSRNPNPGTSTAPYRIFNIGNNTPTVLMDYI--------AALEGALQIT 284 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + D+ +++ +G+ P + +G+ V WY Sbjct: 285 ARKQMLPIQPGDMHSTSADTRALQAWVGFSPAMPVATGVQNFVDWY 330 >gi|310657676|ref|YP_003935397.1| nad-dependent epimerase/dehydratase [Clostridium sticklandii DSM 519] gi|308824454|emb|CBH20492.1| NAD-dependent epimerase/dehydratase [Clostridium sticklandii] Length = 326 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 143/335 (42%), Gaps = 31/335 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQV-- 57 +L++TG GFIGS L L+ Q + Y + N+ + +++ ++V Sbjct: 3 KLLITGADGFIGSHLTEELIR----QGHKVKAFAYYNSFNTWGWLDTLPADIMKEVEVFT 58 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R A+K + + + AA + S D ++ TNI GT +L+ R Sbjct: 59 GDIRDSNGVREAMKGME--EVYHLAALIAIPFSYHSPDTYVDTNIKGTLNVLQAAR---- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D R L ST EVYG+ E P+ SPYSATK +D L ++ ++ Sbjct: 113 -----DIDISRLLITSTSEVYGTAQYVPIDELHPFQGQSPYSATKIGADRLAESFYRSFN 167 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P+ + N YGP +IP IT+++ G G RD+ +V+D + Sbjct: 168 MPITIVRPFNTYGPRQSARAVIPTIITQLLAGKEEIELGSLTPTRDFNFVKDTANGFIEI 227 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGHDR 292 K + IGE NI E IG L LI + + ++I + + Sbjct: 228 AKSDKTIGEEINIATQQE-------ISIGELAQELIRQINPNAKIICDNQRLRPEKSEVN 280 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + KIK W P E G+ +TV ++ N Sbjct: 281 RLLGSNEKIKKLTNWKPNYTFEQGIAETVEFFKGN 315 >gi|156743027|ref|YP_001433156.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234355|gb|ABU59138.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 314 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 34/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ QV V D + G ++L I ++ D+ D Sbjct: 4 VLVTGGAGFIGSHLVEALLRRGD-QVRVFDNFS-TGRYDNLAHIRDD--IEIIEGDLRDE 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLWWSCLS 119 + +R A+ + I + A + V RS+ D+ ITTN + GT +L R Sbjct: 60 DAVRRAVAGVE--VIFHQGALASVQRSV---DDPITTNAVNVTGTLHVLTAAR------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + S+ VYG E +P SPY+ +K + + +A+ YG+P Sbjct: 108 --DAGAHRVVFASSSSVYGDTPTLPKVETQAPHPLSPYAVSKLAGEQYCMAFSSVYGLPA 165 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P +IP I RM+ G +YGDG RD+ Y+E+ V A Sbjct: 166 IALRYFNVFGPRQDPHSEYAAVIPRFIDRMVRGVPPIIYGDGLQSRDFTYIENVVDANLA 225 Query: 236 VLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +N+G +++ +I LL + + + RPG R Sbjct: 226 AADAPADCSAVFNVGAGARTSLLELAAQINHLLGSNLAPDHQ--------PPRPGDVRHS 277 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I+ +G+ P+ ++ GL +T+ W+ Sbjct: 278 QASIDAIRETLGYAPRISLTEGLARTLAWF 307 >gi|310830094|ref|YP_003962451.1| NAD dependent epimerase [Eubacterium limosum KIST612] gi|308741828|gb|ADO39488.1| NAD dependent epimerase [Eubacterium limosum KIST612] Length = 324 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 150/332 (45%), Gaps = 27/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGSA+C L++ + V +D L+ G+ +++ + F F++ DI D Sbjct: 13 RFLVTGGAGFIGSAVCEALLS-MGYFVRCLDDLS-TGSKENIRPFFNNPGFEFIKGDIQD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A D + + AA V RSI + N+ GT +LE R Sbjct: 71 YDICLEACGGI--DYVSHQAAWGSVPRSIKLPLLYEGINVKGTLNMLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K RF+ S+ VYG ++ +E N SPY+ TK +++ + YG+ + Sbjct: 120 QKGVRRFVYASSSSVYGDEERLPKTESQMGNCLSPYALTKKTAEEYAGLYTRLYGLETIG 179 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY--L 235 N +G PE +IP + ++ G + GDG RD+ Y+E+ V A + Sbjct: 180 FRYFNVFGKRQNPEGVYAAVIPKFVKSLMAGEAPRINGDGSQSRDFTYIENAVEANLKGM 239 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + K G YNI + + + + LL+ +P Y +RPG R Sbjct: 240 LAPKEAAGAAYNIACGGQISLNRLYYTLCGLLNRELPPVYG--------PERPGDIRHSC 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D + + + + P + E G+ KT+ WY ++ Sbjct: 292 ADITAARELLNYDPDYSFEDGIEKTIEWYREH 323 >gi|288554320|ref|YP_003426255.1| NAD dependent epimerase/dehydratase family protein [Bacillus pseudofirmus OF4] gi|288545480|gb|ADC49363.1| NAD dependent epimerase/dehydratase family protein [Bacillus pseudofirmus OF4] Length = 341 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 23/335 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++TG AGFIG + + L+ + V V + Y L+++ + F+F++ DI Sbjct: 13 LITGAAGFIGYYMSKKLLEQGCVVVGVDNVNDYYDVKLKHARLEQLQPFDKFTFIKGDIS 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ I S +E++P+ +VN AA++ V SI D +I +NIIG + +LE R + + Sbjct: 73 DKPMIDSVFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACR--YHPVEH 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + S+ VYG+ K F E D P S Y++TK S++ + + H Y IP Sbjct: 131 -------LIYASSSSVYGANKKVPFEETDFVDTPVSLYASTKKSNELMAHTYSHLYKIPA 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN----VRDWLYVEDHVRALYL 235 YGP P+ + G + ++ +G RD+ Y++D V + Sbjct: 184 TGLRFFTVYGPMGRPDMAYFGFTDKYFAGEPIKIFNNGDFDHDLYRDFTYIDDIVEGIER 243 Query: 236 VLKKGRIG----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ++ K + + +NIG NN K + + + L + + ++ I +PG Sbjct: 244 LIGKPPVDAVPHKVFNIGNNNPEKLMTFINTLERTLTKALGREVQFEKVYEPI--KPGDV 301 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +G+ P+ ++E GL + WY++ Sbjct: 302 PATYASTDLLQEAVGFKPKTSIEEGLQQFADWYVE 336 >gi|171059755|ref|YP_001792104.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] gi|170777200|gb|ACB35339.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] Length = 336 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG + L+ D QV+ ID L Y L + L +++ F+F+Q Sbjct: 1 MKILITGAAGFIGMHTAQRLIADGH-QVVGIDNLNDYYDVQLKRDRLARLAELPGFTFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ DR+ + + +V+ AA++ V SI + N++G +LE R Sbjct: 60 VDVADRDALMALFDAHAVTRVVHLAAQAGVRYSITNPHAYGEANLVGFLNMLEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q + + + S+ VYG K FSE D +P S Y+ATK +++ + A+ H Y Sbjct: 116 ---QHRIEHLVY--ASSSSVYGGNRKMPFSEGDSVDHPVSLYAATKKANELMAHAYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ ++EG + ++ +G +RD+ Y++D V + Sbjct: 171 AIPTTGLRFFTVYGPWGRPDMAYFSFTKAIVEGRPIQVFNNGDMLRDFTYIDDIVDGVVA 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L + + +NIG + D + A I + Sbjct: 231 TLYRPATADAAFDPLLPHPGRAQKPFRVFNIGNQDPVALGDFI--------AAIEAAVGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + +PG + D S + G P+ ++ +G+++ V WY Sbjct: 283 SAIKEMLPMQPGDVQATYADVSALAEWTGVQPKTSIRTGIDRFVAWY 329 >gi|309388627|gb|ADO76507.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM 2228] Length = 303 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 161/327 (49%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + LV +V+V+D NL+S K+ + ++ F Q+DI Sbjct: 1 MKVLVTGGAGFIGSNIVDALVEKGH-KVIVVD------NLSSGKKENLNDQVEFYQLDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +++ + ++ + +++ AA+ V SI NI+GT LLE C + Sbjct: 54 EQK-LAEVFEKNEITHVIHHAAQIDVQHSIKDPLYDAQNNILGTINLLE------CCRNN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + + S+ VYG + E+ P SPY +K + ++ + + Y + Sbjct: 107 NVQ---KIIYASSAAVYGEPNYLPIDEEHPIKAMSPYGISKHTPEHYIKMYSELYDLKYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP P+ ++ + + +M+ ++GDG+ RD+++V D V+A + L Sbjct: 164 IFRYANIYGPRQDPKGEGGVVSIFVDQMLAEERPIIFGDGKQTRDFIHVFDIVKANLMAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+G N+ N ++ D V ++ L+ ++P + E R G R ++ Sbjct: 224 KQGD-----NVLVNISTESRDSVKDLVAYLNQILPYKLDAI----YEEVRQGDIRHSSLA 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + +GW P + +GL +TV +Y Sbjct: 275 NRKAEELLGWTPDYDFRAGLEQTVEYY 301 >gi|312898930|ref|ZP_07758318.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359] gi|310620092|gb|EFQ03664.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359] Length = 310 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 31/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS + LV D +V+VID L+ N+N ++ L F D Sbjct: 1 MKILVTGGAGFIGSHIVDMLV-DRGDEVVVIDNLSTGVKENVND-----KARLLCF---D 51 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ + +E + DA+ + AA++ V S E N++G +LE R Sbjct: 52 IRDRDRLLQVCEEEKFDAVFHEAAQTQVPYSQEHPYEDSDENVMGLLSVLEGAR------ 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + S+ VYG D ED P P+S Y +K S+ + + +G+P Sbjct: 106 ---KTGVKKVVFSSSAAVYGDNDNLPLKEDEPLTPTSFYGLSKVISERYLEMYYKVFGLP 162 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ +N YG H ++ + + G + +YGDG+ RD++YV+D A Sbjct: 163 YVVLRYANVYGERQGVHGEGGVVFVFAHALTHGEDLTIYGDGEQTRDFVYVKDVAAANVA 222 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ YNI E ++ + EI F L + + + + ++R G R A Sbjct: 223 ALQDEVKPGIYNISTTIE-TTVNALKEILFHLSGI-------RKDVHYEDERTGDIVRSA 274 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +D+ K K + W P+E + SGL T +++ Sbjct: 275 LDNHKAKEFLKWRPKEKIISGLASTYEYFV 304 >gi|229087736|ref|ZP_04219859.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-44] gi|228695571|gb|EEL48433.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-44] Length = 337 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 43/326 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + LV++ + V+V+D NL + E + + F + D+ D+ Sbjct: 11 ILVCGGAGYIGSHAVKKLVDEGQ-SVIVVD------NLQTGHEDAIAEGVKFYKGDLRDK 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 64 SFLRDVFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L SE+ P NP++ Y TK + + ++ + + Sbjct: 117 IDKFIFS--STAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKVF 174 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 175 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 234 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +D V A +L LK G + YN+G N +IV + + + IP + Sbjct: 235 DDLVAAHFLGLKDLQNGGDSDFYNLGNGNGFSVKEIVEAVREVTNHEIPAEVA------- 287 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G R S K K ++GW P Sbjct: 288 -PRRAGDPARLVASSQKAKEKLGWSP 312 >gi|21673069|ref|NP_661134.1| NAD-dependent epimerase/dehydratase family protein [Chlorobium tepidum TLS] gi|21646139|gb|AAM71476.1| NAD-dependent epimerase/dehydratase family protein [Chlorobium tepidum TLS] Length = 350 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 54/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKEISQ 48 M+++VTG AGFIG LC L +ND Q + +L Y+G S E + Sbjct: 1 MKILVTGAAGFIGFHLCERLASRGDDVVGIDNINDYYDQRVKYGRLAYSGIAESAIEYGK 60 Query: 49 SNL------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 + + F+++++ D+E I + K + DA+ N AA++ V S+ ++++NI+ Sbjct: 61 TVQSSKYPNYRFVKLNLEDKEGIDNLFKAEKFDALCNLAAQAGVRYSLTNPASYVSSNIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G LLE R F S+ VYG ++ FS D +P S Y+A+K Sbjct: 121 GFVNLLEAAR---------HNSLGNFCYASSSSVYGLNERQPFSVHDNVDHPVSLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H +GIP YGP+ P+ + L +EG + ++ G R Sbjct: 172 KSNELMAHTYSHLFGIPTTGLRFFTVYGPWGRPDMALFLFTKAALEGRPIDVFNYGNMQR 231 Query: 222 DWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNNERKNIDIVFEI 263 D+ Y++D V + VL G + YNIG N K +D + + Sbjct: 232 DFTYIDDIVEGVVRVLDHPAQPNPDWSGAAPDPGTSSAPYRVYNIGNNKTVKLMDYIEAL 291 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L I K+ + +PG + S + + + P+ ++ G+N+ + W Sbjct: 292 ENALGVTIEKN--------LLPIQPGDVPSTWANVSDLVKDFDYKPETTVQEGVNRFIAW 343 Query: 324 Y 324 Y Sbjct: 344 Y 344 >gi|156744183|ref|YP_001434312.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156235511|gb|ABU60294.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGF+GS LC R+L V+ +D L GN +++ ++ FSF++ D+ Sbjct: 1 MRVLITGGAGFLGSHLCDRFLAEGHT--VVAMDNLI-TGNTDNIAHLAGHPRFSFIKHDV 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L DAI++FA+ + + + + +GT L L+ Sbjct: 58 TNYIFVEGPL-----DAILHFASPASPVDYLELPIQTLKVGALGTHKAL--------GLA 104 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +DKK RFL ST EVYG + + P P Y K ++ + +A+ Sbjct: 105 KDKKA--RFLLASTSEVYGDPQVHPQPETYYGHVNPIGPRGVYDEAKRFAEAMTMAYHRY 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP +++P I + + G + +YGDG R + YV+D V Sbjct: 163 HGVETRIVRIFNTYGPRMRLRDGRVVPNFIQQALRGEPLTIYGDGSQTRSFQYVDDLVEG 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +Y +L + E NIG E + L++AL +D P + Sbjct: 223 VYRLLFSNEV-EPVNIGNPGEF----TIKAFAELVNALTDNKAGVVYKDLRTQDDP---Q 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K + +GW P+ ++E GL +T+ W+ Sbjct: 275 VRQPDIAKARRILGWEPRVSLEEGLRRTIPWF 306 >gi|88810758|ref|ZP_01126015.1| probable nucleotide sugar dehydratase [Nitrococcus mobilis Nb-231] gi|88792388|gb|EAR23498.1| probable nucleotide sugar dehydratase [Nitrococcus mobilis Nb-231] Length = 309 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 41/303 (13%) Query: 43 LKEISQSNLFSF---------------LQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 +K +SQ N FS+ L D+ D + K+ D + + AA + Sbjct: 11 VKALSQYNSFSYWGWLEDVNCLDRVEVLTGDVRDPHYCKKITKDV--DLVFHLAALIAIP 68 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 S + D ++ TNI GT + C + + R + ST EVYG+ E Sbjct: 69 YSYVAPDSYVDTNIKGTLNI---------CQAAMENGVKRVIHTSTSEVYGTAQYVPIDE 119 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE 207 P P SPYSA+K +D + +++ + +G+P+ ++ N YGP +IP IT++ Sbjct: 120 KHPLQPQSPYSASKIGADAMAMSFYNAFGLPITIARPFNTYGPRQSARAVIPTIITQIAS 179 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 G+ GD RD+ YVED R L L + G+ NI N+E D + I L Sbjct: 180 GNTQIKLGDVSPTRDFNYVEDTCRGFLALASCESADGKAVNISSNHEISVEDTLAIIREL 239 Query: 267 LDALIPKSYSHTELIRFIED---RPGHDRRYAI--DSSKIKSEIGWFPQENMESGLNKTV 321 + S E I ED RP + + D++ I+ G+ P+ ++ +GL KT+ Sbjct: 240 MS-------SDVEFI--TEDQRLRPQRSEVFRLWGDNTLIRELTGFQPEHDICTGLQKTI 290 Query: 322 CWY 324 W+ Sbjct: 291 DWF 293 >gi|146342016|ref|YP_001207064.1| nucleotide sugar epimerase capsular polysaccharide biosynthesis protein [Bradyrhizobium sp. ORS278] gi|146194822|emb|CAL78847.1| nucleotide sugar epimerase; putative Capsular polysaccharide biosynthesis protein [Bradyrhizobium sp. ORS278] Length = 338 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 53/353 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNL-----F 52 ++VTG AGFIG L + L+ + + QV+ +D N+NS LKE + L F Sbjct: 6 ILVTGAAGFIGFHLTQQLLAEGR-QVVGLD------NINSYYDPTLKEARLALLQAQPGF 58 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 SF ++D+ DR I++ + A+V+ AA++ V S+ ++ N+ G +LE R Sbjct: 59 SFHKLDLVDRAAIKALFAAHRFPAVVHLAAQAGVRYSLENPHAYVDANLEGFINVLEGCR 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 C L S+ VYG+ K FS +D +P S Y+A+K +++ + ++ Sbjct: 119 -HHGC--------GHLLFASSSSVYGANTKLPFSVKDNVDHPISLYAASKKANELMAHSY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y +P YGP+ P+ + + ++ G V L+ GQ RD+ YV+D V+ Sbjct: 170 SHLYRLPATGLRFFTVYGPWGRPDMAMFIFAKAILAGQPVRLFNHGQMRRDFTYVDDIVQ 229 Query: 232 ALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 A+ ++ + G YNIG N+ + D++ L+ K Sbjct: 230 AIVRLIGRPPQGNPDWNGNTPDPSSSRAPWRIYNIGNNHPEQLTDVI--------TLLEK 281 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + +PG D S ++ +IG+ P ++ G+ + WY D Sbjct: 282 EFGRPAIKEMLPMQPGDVEATYADVSDLERDIGFRPATSIVDGIARFARWYRD 334 >gi|237817146|ref|ZP_04596138.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A] gi|237787959|gb|EEP62175.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A] Length = 343 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 26 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 84 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 130 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 131 ----RIFQASTSEVYGDPHVHPRPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 186 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 187 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 246 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 247 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 296 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 328 >gi|269103921|ref|ZP_06156618.1| putative nucleotide sugar epimerase [Photobacterium damselae subsp. damselae CIP 102761] gi|16945767|dbj|BAB72035.1| nucleotide sugar epimerase [Photobacterium damselae subsp. piscicida] gi|268163819|gb|EEZ42315.1| putative nucleotide sugar epimerase [Photobacterium damselae subsp. damselae CIP 102761] Length = 334 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 155/346 (44%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSN-LFSFLQV 57 M+ +VTG AGFIGSA+ L L QV+ +D L Y +L + +N LF+F+++ Sbjct: 1 MKYLVTGAAGFIGSAVTERLCA-LGHQVVGVDNLNDYYDVSLKQARLQRAANPLFTFIEL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + Q D +++ AA++ V SI + +N++G +LE C Sbjct: 60 DLADREGVAQLFADQQFDKVIHLAAQAGVRYSIDNPLAYADSNLVGHLTILE------GC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG K F + D +P S Y+ATK S++ + + H YG Sbjct: 114 RHHKVK---HLVYASSSSVYGLNHKTPFNTSDSVDHPISLYAATKKSNELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + ++EG + +Y G RD+ Y++D V + + Sbjct: 171 VPTTGLRFFTVYGPWGRPDMALFKFTNAIMEGKEIDVYNHGDMRRDFTYIDDIVEGVMRI 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG + K +D + + L K+ Sbjct: 231 QDVIPEPNPDWTVETGSPATSSAPYRVYNIGHGSPVKLMDYIEALEEALGIEAKKN---- 286 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F++ +PG D+ + + G+ P+ ++ G+ V WY Sbjct: 287 ----FMDMQPGDVYMTYADTEDLFNATGYKPEVKVKEGVKAFVDWY 328 >gi|330507325|ref|YP_004383753.1| NAD dependent epimerase/dehydratase [Methanosaeta concilii GP-6] gi|328928133|gb|AEB67935.1| NAD dependent epimerase/dehydratase [Methanosaeta concilii GP-6] Length = 329 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 151/332 (45%), Gaps = 26/332 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 +++VTG GFIGS L L+ DL V + + N L EI S LQ+ D Sbjct: 9 KVLVTGAGGFIGSHLIERLI-DLGADVKGFARYN-SRNDWGLLEIIPSQKLDSLQIISGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + + SA+++ D I + + + S + + I NI+ T +L R L Sbjct: 67 LQDYDAVFSAVRDV--DVIFHLGSLISIPYSYIRPRDTIENNILSTLNILTAAR----DL 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K + S+ EVYG+ E P SPYSA+K +D + ++ ++ +P Sbjct: 121 GVEK-----VVHTSSSEVYGTALYVPIDEKHPLQGQSPYSASKIGADKIAESFYCSFDLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V N YGP +IP IT+ IE + L G RD+ +V+D V + Sbjct: 176 VATIRPFNTYGPRQSARAIIPTIITQAIEQEKIKL-GSLFPTRDYTFVKDTVNGFIRTAE 234 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLL--DALIPKSYSHTELIRFIEDRPGHDRRYA 295 K IGE NIG N E D+ I LL D +I + S ++ +R Sbjct: 235 SKSSIGEVINIGSNFEISMGDLAQRISSLLNKDIMIMQDSSRVRPLK------SEVKRLW 288 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K K +GW PQ +++ GL +T+ W +N Sbjct: 289 CDNAKAKRLLGWEPQVSLDEGLKETIEWISEN 320 >gi|159903781|ref|YP_001551125.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9211] gi|159888957|gb|ABX09171.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9211] Length = 333 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 25/331 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQVDI 59 +++VTG GFIGS L L+ D +V +G+ L+E+ +S DI Sbjct: 4 KVLVTGADGFIGSHLVESLL-DNGYEVKPFCFYNSSGSWGWLEELCDEKSKELDVFLGDI 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCL 118 D C++ A+K D + + AA + S + A +I TNIIGT +LE + L S Sbjct: 63 RDPVCVKEAMKGC--DMVFHLAALIGIPYSYIAARSYIETNIIGTLNVLEAAKDLGVS-- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ST E YG+ +E P + SPYSA+K +D + L++ H++ IP Sbjct: 119 --------KIIHTSTSETYGTAQSVPINEKHPLSGQSPYSASKIGADQIALSFWHSFNIP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N +GP +IP I+++ G+ G RD+ YV D A + Sbjct: 171 VTVIRPFNTFGPRQSNRAVIPTIISQIASGAKKIELGSLSPTRDFTYVLDTCSAYIAIAN 230 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++ G+ N N E D I L+ + + + ++ IR I +R Y D Sbjct: 231 SNKVTGKVINAASNFEISIGDTASLIASLMQSKVDLC-TDSKRIRPINSEV--NRLYG-D 286 Query: 298 SSKIKSEIGWFP----QENMESGLNKTVCWY 324 +S IK W P + +GL KT+ W+ Sbjct: 287 NSLIKDLTDWQPKFSGKNGFNNGLKKTIEWF 317 >gi|224008156|ref|XP_002293037.1| hypothetical protein THAPSDRAFT_29728 [Thalassiosira pseudonana CCMP1335] gi|220971163|gb|EED89498.1| hypothetical protein THAPSDRAFT_29728 [Thalassiosira pseudonana CCMP1335] Length = 418 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 27/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEI-SQSNLFS 53 +++VTGGAGF+GS++ L++ V+++D++ NL L+ + + Sbjct: 72 KVLVTGGAGFVGSSVAEELLSRGD-DVVIVDEMNDYYDVRIKENNLRRLRMLCPDEKRLT 130 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + DICD + + ++ P I + AA + V SI +I +NI GT L+E Sbjct: 131 IYRGDICDEDFMLQLFEKEAPQWICHMAARAGVRPSIQDPYVYIHSNIRGTTHLMELAHK 190 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWG 172 + F+ S+ VYG FSE+ NP SPY+A+K + + L + Sbjct: 191 FGVK---------NFVFASSSSVYGGSTSTFFSEEENVDNPVSPYAASKKACELLAYTYH 241 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y + V YGP P+ I R+ G + +GDG + RD+ Y+ D V Sbjct: 242 HLYKLNVTGLRFFTVYGPRGRPDMAPFKFIDRVSRGLELQQFGDGSSSRDYTYIGDIVDG 301 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + + E +N+G + D + +++ K +I+ + D+PG Sbjct: 302 IIRAIDRPHPYEVFNLGKGSGTSLRDFI--------SIVEKHVGRDAIIKIMPDQPGDVP 353 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK +G+ + G+ +TV WY Sbjct: 354 YTCADVSKASELLGYRATVPFDEGIRRTVDWY 385 >gi|153954706|ref|YP_001395471.1| nucleoside-diphosphate-sugar epimerase [Clostridium kluyveri DSM 555] gi|219855173|ref|YP_002472295.1| hypothetical protein CKR_1830 [Clostridium kluyveri NBRC 12016] gi|146347564|gb|EDK34100.1| Predicted nucleoside-diphosphate-sugar epimerase [Clostridium kluyveri DSM 555] gi|219568897|dbj|BAH06881.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 335 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 28/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIG + + L+N+ V V+D L+ G L +++E + F F+ DI Sbjct: 1 MNTLVTGGAGFIGRWVTKRLLNE-NDSVTVLDNLS-NGTLENIEEFKNNTHFKFIGGDIK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D+ + K + D I + AA +V SI + + +GTF +LE+ R Sbjct: 59 DKNKLDEVFKN-KFDIIYHLAASINVQDSIDDPETTFFNDTLGTFNILEKARYQMFGKRG 117 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYL 167 W + + + +ST VY S D+G+ SE P P SPY +K +++ + Sbjct: 118 RMDGNSWVLDPNEDTYPCKIVFMSTCMVYDVSKDEGI-SETHPVKPVSPYGGSKIAAENM 176 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 VL++ + Y +P ++ N YG + ++ + I ++ G + +YG G+ RD L Sbjct: 177 VLSYYNAYKLPAVVIRPFNTYGSFQKTGGEGGVVAIFINNVLHGRDINIYGSGEQTRDLL 236 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 YV+D V++ G E+ N N D+ I L D +I S ++ I Sbjct: 237 YVKD---CADFVVESG-YSEKVNGQIVNAGTGRDVT--INELAD-IICGSKIKINHVKHI 289 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + D SK K IGW P+ +E G+ +T W Sbjct: 290 HPQS-EIMKLKCDYSKAKKLIGWQPKYTLEQGIEETRKW 327 >gi|321312625|ref|YP_004204912.1| putative UDP-glucose epimerase [Bacillus subtilis BSn5] gi|320018899|gb|ADV93885.1| putative UDP-glucose epimerase [Bacillus subtilis BSn5] Length = 316 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 150/330 (45%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D K V+ ID ++ L +LK + F+F++ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 ++ + + L E D I + AA V RS G+ + NI LLE R Sbjct: 61 ENLLTADL--APLLE-GVDVIFHLAAIPGV-RSSWGSHFHPYAAHNIQALQRLLEACR-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + F F ST VYG +G SE+ +P SPY TK + + L + + Sbjct: 115 -----EHSIQTFVF--ASTSSVYGE-KQGKVSENTSLSPLSPYGVTKLTGEKLCHVYQQS 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +GIP+++ YGP P+ I + ++ + ++GDGQ RD+ Y+ D V+ + Sbjct: 167 FGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYIGDCVKGIT 226 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 VL K IGE NIGG + +V +LI S + F + G Sbjct: 227 AVLGKPHLIGETVNIGGAERASVLKVV--------SLIEDISSRKATLHFSDKIAGEPSN 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK K + + P +++ GL + + Sbjct: 279 TWADISKAKQLLHYDPATSLKDGLTNEIAY 308 >gi|225628976|ref|ZP_03787010.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo] gi|225616822|gb|EEH13870.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo] Length = 343 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 26 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 84 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 130 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 131 ----RIFQASTSEVYGDPHVHPQPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 186 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 187 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 246 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 247 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 296 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 328 >gi|330993690|ref|ZP_08317624.1| UDP-glucuronate 5'-epimerase [Gluconacetobacter sp. SXCC-1] gi|329759264|gb|EGG75774.1| UDP-glucuronate 5'-epimerase [Gluconacetobacter sp. SXCC-1] Length = 346 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 82/343 (23%), Positives = 162/343 (47%), Gaps = 37/343 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD-- 58 MR++VTG AGFIG + R L+ + V +D +T ++ +LK+ + L +F Q Sbjct: 14 MRILVTGTAGFIGFHVARRLLREGH-AVTGVDGMTPYYDV-TLKQARHAMLRAFGQFTCH 71 Query: 59 ---ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D + + + +P+ +++ AA++ V SI +I+ NI+GT+ ++E+ R Sbjct: 72 EFMLEDMQAMERTFAQCRPELVIHLAAQAGVRHSIESPGGYISANIVGTYNVMEQVR--- 128 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLV 168 + F+ ST VYG+ + D+P+ +P S Y+ATK +++ L Sbjct: 129 ------QHRPRHFMLASTSSVYGA------NTDVPFVESQRCDHPLSLYAATKKATEELA 176 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H + +PV YGP+ P+ + + G + +Y +G+ RD+ Y++D Sbjct: 177 HSYSHIWQVPVTAFRFFTVYGPWGRPDMALFRFTANTLAGKPIDVYNNGRMERDFTYIDD 236 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIV-------FEIGFLLDALIPKSYSHTELI 281 V A+ L+ +K G G + ++ + ++A I K+ + Sbjct: 237 LVEAICLLCEKPPRGPGEPDPGASPVAPYRVINIGNSQPVSLMAFIEA-IEKALGRPCIR 295 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ +PG R D + ++ G+ P +++ G++ V WY Sbjct: 296 NYMPMQPGDVIRTWADCTALRDLTGFCPATSVQDGVDAFVAWY 338 >gi|62317595|ref|YP_223448.1| NAD-dependent epimerase/dehydratase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269578|ref|YP_418869.1| NAD-dependent epimerase/dehydratase [Brucella melitensis biovar Abortus 2308] gi|260544833|ref|ZP_05820654.1| NAD-dependent epimerase/dehydratase [Brucella abortus NCTC 8038] gi|260763359|ref|ZP_05875691.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|62197788|gb|AAX76087.1| NAD-dependent epimerase/dehydratase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939852|emb|CAJ12861.1| NAD-dependent epimerase/dehydratase [Brucella melitensis biovar Abortus 2308] gi|260098104|gb|EEW81978.1| NAD-dependent epimerase/dehydratase [Brucella abortus NCTC 8038] gi|260673780|gb|EEX60601.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str. 86/8/59] Length = 337 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 20 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 77 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 78 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 125 ----RIFQASTSEVYGDPHVHPRPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 181 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 241 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 289 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 290 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 322 >gi|332799706|ref|YP_004461205.1| UDP-glucuronate 5'-epimerase [Tepidanaerobacter sp. Re1] gi|332697441|gb|AEE91898.1| UDP-glucuronate 5'-epimerase [Tepidanaerobacter sp. Re1] Length = 353 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 R VTG AGFIG L + L+ + QV+ +D L Y NL L + Q F F+ Sbjct: 13 RYFVTGAAGFIGFHLSKRLLKE-DCQVIGLDNLNDYYDVNLKRARLDILKQDGNFQFIYA 71 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ D++ I KE++ + +VN AA++ V S+ +I +NI+G +LE R Sbjct: 72 NLEDKDAIDKVFKEYKINIVVNLAAQAGVRYSLKNPYAYIQSNIVGFMNILEACRY---- 127 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +K + + S+ VYGS +K FS D +P S Y+ATK S++ + + H YG Sbjct: 128 ---NKVEHLVY--ASSSSVYGSNEKMPFSTSDNVDHPISLYAATKKSNELMAHTYSHLYG 182 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + L ++ + ++ G+ RD+ YV+D + + V Sbjct: 183 IPTTGLRFFTVYGPWGRPDMALFLFTKAILNDEPIKVFNYGKMERDFTYVDDIIEGVIRV 242 Query: 237 LKK-GRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + ++ E YNIG N+ K I+ + EI L+ + K Sbjct: 243 ISNPPKLNENFNRLNPNPSTSFAPYKIYNIGNNHPVKLIEFI-EI---LERHLGKKAKKE 298 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L D P + YA D + ++G+ P +++ G+ K V WY Sbjct: 299 YLPLQAGDVP---KTYA-DVDDLVRDVGFKPNTSVDEGIRKFVEWY 340 >gi|116074490|ref|ZP_01471752.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9916] gi|116069795|gb|EAU75547.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9916] Length = 332 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 33/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L L++ D++ L ++ G L+SL +SNL L D Sbjct: 3 KVLVTGADGFIGSHLTEKLLSEGYDVRAFCLYNSNGSW-GWLDSLPHEVKSNLDVVLG-D 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D C+RSA+K D + + AA + S + ++ TNI GT +L+ R Sbjct: 61 IRDPLCVRSAMKNC--DVVYHLAALIAIPYSYIAPSSYVDTNIHGTLNVLQAAR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + R + ST E YG+ E P SPY+A+K +D + L++ ++ P Sbjct: 113 ---ELNVSRVVHTSTSETYGTAQYVPIDEKHPQVGQSPYAASKIGADQIALSYWRSFETP 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT++ G+H G RD+ +VED A V Sbjct: 170 VSVLRPFNTYGPRQSSRAVIPTIITQIASGNHQLRLGSLSPTRDFNFVEDTCNAFLSVAS 229 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR---FIEDRPGHDRRY 294 +G+ N + E IG ++ + S E+I + + R Sbjct: 230 CDTSLGQVLNSASSFE-------VSIGETVNMIANIMGSDVEIIEDTSRLRPKDSEVNRL 282 Query: 295 AIDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD--NNWWWRP 333 D++ ++S GW P E GL+ T+ W+ D N +RP Sbjct: 283 FGDNTLLRSLTGWQPSYSGLEGFRRGLSITIDWFSDPTNLRQYRP 327 >gi|24214306|ref|NP_711787.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|45658025|ref|YP_002111.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195227|gb|AAN48805.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|45601266|gb|AAS70748.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 330 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 29/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQV 57 +++TG GFIGS L LV Q + + NS + Q F Sbjct: 2 ILITGADGFIGSHLTETLVR----QGHEVRAFVLYNSFNSWGWLDQCPDDIKGKFEVFSG 57 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D +R+A+K DA+++ AA + S D +I TN+ GT +++ R Sbjct: 58 DIRDPNGVRAAMKGC--DAVLHLAALIAIPYSYHSPDTYIDTNVKGTLNVVQAAR----- 110 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + ST EVYG+ +E+ P SPYSA+K +D + +++ +++G Sbjct: 111 ----DLNVSKVIHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYNSFGT 166 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + N YGP +IP IT++ +G+ G RD+ +V+D V L Sbjct: 167 PVSIIRPFNTYGPRQSARAVIPTIITQIAKGNRKIKLGAVHPTRDFNFVKDTVAGFIAAL 226 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +GE N+G N E D V I ++ + ++ R ++ +R +A Sbjct: 227 NSDVCVGEVINLGSNYEISVGDTVRLIAEVMKVNVE---IESDDQRLRPEKSEVERLWA- 282 Query: 297 DSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 + K K I W P+ + + GL++T+ W+ D Sbjct: 283 SNQKAKDLINWSPEYGGRDGFKRGLSETIDWFSD 316 >gi|228943496|ref|ZP_04105938.1| NDP-sugar epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976635|ref|ZP_04137077.1| NDP-sugar epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228783073|gb|EEM31210.1| NDP-sugar epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816185|gb|EEM62368.1| NDP-sugar epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 302 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 30/310 (9%) Query: 16 LCRYLVNDLKIQVLVIDKLTYAG----NLNSLKEISQSNLFSFLQVDICDRECIRSALKE 71 +C+ L+ + V+ ID ++++ + ++ F F+Q DI + + + L++ Sbjct: 1 MCQALLKNSAYHVVGIDHFIGPTPTTLKTDNIQSLELNSRFQFIQEDILNID-LSKLLQD 59 Query: 72 FQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFL 129 D + + AA V R+ G D +++ NII T LLE SC K D +F+ Sbjct: 60 I--DVVYHLAAIPGV-RTSWGKDFQSYVSNNIIVTQQLLE------SC-KHIKLD--KFI 107 Query: 130 QISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYG 189 IST VYG G SED+ P SPY TK S ++L + + IP+++ YG Sbjct: 108 HISTSSVYGE-KSGAVSEDLLPTPLSPYGVTKLSGEHLCHVYRKNFHIPIVILRYFTVYG 166 Query: 190 PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--KKGRIGERYN 247 P P+ I +++E + ++GDG RD+ Y++D +R L KK IGE N Sbjct: 167 PRQRPDMAFHRLIKQLLEDKPLTIFGDGTQTRDFTYIDDCIRGTVAALETKKSIIGEVIN 226 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 IGG + +DI+ +++ K + +F++ PG ++ D SK + + + Sbjct: 227 IGGKEQASILDII--------SILEKISGKSATKKFLKSVPGEPKQTWADISKANTLLQY 278 Query: 308 FPQENMESGL 317 P ++ GL Sbjct: 279 SPTVSLSDGL 288 >gi|85858242|ref|YP_460444.1| dTDP-glucose 4,6-dehydratase [Syntrophus aciditrophicus SB] gi|85721333|gb|ABC76276.1| dTDP-glucose 4,6-dehydratase [Syntrophus aciditrophicus SB] Length = 331 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 32/340 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++VTG GFIGS L L + ++ V L L + + D+ Sbjct: 9 KVLVTGAGGFIGSHLVERLAGEGASVRAFVRYNSRADAGLLKLAPPEILSRIELIGGDLR 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +R A++ + + + A + S E TN++GT +L +C Sbjct: 69 DSDAVRKAVEGCR--IVFHLGALISIPYSYYHPVEVAETNLMGTLNVL------LACRDL 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST EVYG+ + E P SPYSA+K +D L ++ + +PV+ Sbjct: 121 GVE---RLIHTSTSEVYGTAQRVPIDEAHPLQGQSPYSASKIGADKLAESFFCAFSVPVV 177 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 N +GP +IP IT+++ + L G+ + RD+ YV+D V L K+ Sbjct: 178 TVRPFNTFGPRQSARAVIPTIITQVLARQSIRL-GNLETTRDFTYVDDTVSGFLCAAQKE 236 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR------- 292 G G +N+G +E IG L +I K +E P R Sbjct: 237 GIEGMTFNLGTGSE-------IAIGVLARTIIEKIGVPVS----VELDPERLRPEGSEVM 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R D+S+ +S++GW P+ ++ GLN+T+ W +N +R Sbjct: 286 RLLSDNSRARSQLGWGPEVGLDEGLNRTIAWIRENLGNYR 325 >gi|294620195|ref|ZP_06699529.1| UDP-glucuronate 5'-epimerase [Enterococcus faecium E1679] gi|314940183|ref|ZP_07847361.1| NAD-binding domain 4 [Enterococcus faecium TX0133a04] gi|314942400|ref|ZP_07849243.1| NAD-binding domain 4 [Enterococcus faecium TX0133C] gi|314952324|ref|ZP_07855335.1| NAD-binding domain 4 [Enterococcus faecium TX0133A] gi|314994233|ref|ZP_07859536.1| NAD-binding domain 4 [Enterococcus faecium TX0133B] gi|314997148|ref|ZP_07862134.1| NAD-binding domain 4 [Enterococcus faecium TX0133a01] gi|291593548|gb|EFF25088.1| UDP-glucuronate 5'-epimerase [Enterococcus faecium E1679] gi|313588722|gb|EFR67567.1| NAD-binding domain 4 [Enterococcus faecium TX0133a01] gi|313591320|gb|EFR70165.1| NAD-binding domain 4 [Enterococcus faecium TX0133B] gi|313595583|gb|EFR74428.1| NAD-binding domain 4 [Enterococcus faecium TX0133A] gi|313598800|gb|EFR77645.1| NAD-binding domain 4 [Enterococcus faecium TX0133C] gi|313640622|gb|EFS05202.1| NAD-binding domain 4 [Enterococcus faecium TX0133a04] Length = 363 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 95/357 (26%), Positives = 158/357 (44%), Gaps = 47/357 (13%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSN----------- 50 +++TG AGFIGS L L+ I+++ ID N+N ++S N Sbjct: 13 ILITGAAGFIGSNLVLELLRTQSSIKIIGID------NMNDYYDVSIKNYRLSEIETEAK 66 Query: 51 -----LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTF 105 ++F++ I D+ I ++P +VN AA++ V SI D +I +NIIG + Sbjct: 67 NHPGSTWNFIKGSIADKATIDFIFDNYKPSIVVNLAAQAGVRYSITNPDMYIESNIIGFY 126 Query: 106 ILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASS 164 +LE R + + + S+ VYG+ K +S ED N S Y+ATK S+ Sbjct: 127 NILEACRHSY---DNGESGVEHLVYASSSSVYGTNKKIPYSTEDKVDNQVSLYAATKKSN 183 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 + + A+ Y IP YGP P+ ++ G ++ ++ G RD+ Sbjct: 184 ESMAHAYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTDKLRAGDNIQIFNYGNCKRDFT 243 Query: 225 YVEDHVRALYLVLK------KGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDAL 270 Y++D V + V++ G G YNIG N +D V + + + Sbjct: 244 YIDDIVEGVKRVMQCAPEKIDGEDGLPIPPYHIYNIGNNTPENLLDFVDILQQELIAAGV 303 Query: 271 IPKSY---SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +P+ Y SHTEL+ +PG D+S ++ + + P ++ GL K WY Sbjct: 304 LPEDYDFESHTELVPM---QPGDVPVTYADTSALERDFEFKPSTSLRDGLRKFAQWY 357 >gi|254558779|ref|YP_003065874.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] gi|254266057|emb|CAX21809.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] Length = 363 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 151/347 (43%), Gaps = 43/347 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+G+ L L + + VLV D LT G +L +++ + + V R Sbjct: 12 VLVTGGAGFVGANLADQLAAEGQT-VLVYDALTRPGVEANLAWLTERHGARIVPVIADIR 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + AL + A+ +FAA+ V S+ E + N+ GT LLE R + Sbjct: 71 DGAELALAVREAGAVFHFAAQVAVTTSMTAPWEDMEVNLGGTLTLLEALRA--------R 122 Query: 123 KDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSATKAS 163 + L ST++VYG L D L ED P + +PY +K + Sbjct: 123 RGAVPLLFASTNKVYGGLPDVELAVEGDAYRPTDPNLRAHGVGEDRPLDFHTPYGCSKGA 182 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNV 220 +D VL + +YG+P ++ S YGP + + + R + V LYGDG+ V Sbjct: 183 ADAYVLDYARSYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALTNRTVTLYGDGRQV 242 Query: 221 RDWLYVEDHVRALYLVLKK-GRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 RD L+V D V A L + R+ G +N+GG +N ++ +G LL + Sbjct: 243 RDILHVRDAVAAYRAALARIDRVAGRAFNLGGGPDNAVSLRGLIAHLGTLLGREVG---- 298 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I RPG R Y D+ + S +G P G+ W Sbjct: 299 ----IETGAWRPGDQRYYVSDTRRAASMLGLAPPLPWREGVADLAAW 341 >gi|254171998|ref|ZP_04878674.1| UDP-glucose 4-epimerase [Thermococcus sp. AM4] gi|214033894|gb|EEB74720.1| UDP-glucose 4-epimerase [Thermococcus sp. AM4] Length = 310 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 33/326 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + LV D V+VID L Y G ++ ++ ++ DI D Sbjct: 6 IVVTGGAGFIGSHIAWELVKDN--DVIVIDNL-YTGKPENVPPGAK-----LVKADIRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + Q D + + AA+ V SI N++GT ++ + L Sbjct: 58 SAIAELIS--QADYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNIIR------ALLEGHG 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K F S+ VYG E P SPY TKA+++ + + YG+PV+ Sbjct: 110 KLIF----ASSAAVYGDNPNLPLKETERPRPLSPYGVTKATAEEYLRVYHELYGLPVVAL 165 Query: 183 NCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP ++ +I + I R + G + ++GDG+ RD++YV+D VRA LV + Sbjct: 166 RYFNVFGPRQSFNQYAGVISIFINRALAGEPLVIFGDGKQTRDFIYVKDVVRANLLVAES 225 Query: 240 GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G +N+ + +++ + I + T I F + RPG R D Sbjct: 226 RKANGRVFNVATGRQTSILELAMK--------IIEITGTTSSIIFDKPRPGDIRHSLADI 277 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 S+I+ ++G+ P+ ++E GL KTV ++ Sbjct: 278 SEIR-KLGFEPEFSLEEGLKKTVEFF 302 >gi|323703699|ref|ZP_08115340.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531352|gb|EGB21250.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 163/333 (48%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R L +VLV+D L G+ ++ +I ++VDI Sbjct: 1 MQILVCGGAGYIGSHAVRELYR-AGYEVLVLDNLV-KGHREAIGDIP------LVEVDIN 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + ++ + DA+++FAA S V S++ ++ N++GT L+E LS Sbjct: 53 DKPSLEQVFQKQKIDAVMHFAAYSLVGESVVEPAKYYHNNVLGTLNLME------VMLSY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + ST VYG + +E+ P P++PY ATK + + ++ +G YG+ + Sbjct: 107 GVK---RIIFSSTAAVYGEPVELPITEEHPTRPTNPYGATKLAVEGMLHWFGQAYGLNYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ + + G H PE LIPL + T + + ++G DG +RD++ Sbjct: 164 SLRYFNAAGADVAGDIGEDHQPETHLIPLVLQTALGVRPEIKIFGTDYPTPDGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +V D H+ AL ++ +G YN+G + GF + +I + T + Sbjct: 224 HVTDLANAHLLALEKIINEGG-SAIYNLGNGS-----------GFSVREVIQVAQEVTGK 271 Query: 280 LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 LI+ +E RPG S KIK E+GW P+ Sbjct: 272 LIKVMEAERRPGDPAVLVASSEKIKKELGWQPR 304 >gi|23500289|ref|NP_699729.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis 1330] gi|148558163|ref|YP_001257508.1| NAD-dependent epimerase/dehydratase family protein [Brucella ovis ATCC 25840] gi|256015321|ref|YP_003105330.1| NAD-dependent epimerase/dehydratase family protein [Brucella microti CCM 4915] gi|260568167|ref|ZP_05838636.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40] gi|260756690|ref|ZP_05869038.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str. 870] gi|260882507|ref|ZP_05894121.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str. C68] gi|261215998|ref|ZP_05930279.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str. Tulya] gi|261313389|ref|ZP_05952586.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M163/99/10] gi|261319373|ref|ZP_05958570.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94] gi|261750256|ref|ZP_05993965.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|261753528|ref|ZP_05997237.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|261756698|ref|ZP_06000407.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99] gi|265986627|ref|ZP_06099184.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M292/94/1] gi|265996275|ref|ZP_06108832.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1] gi|294853660|ref|ZP_06794332.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026] gi|297249638|ref|ZP_06933339.1| dTDP-glucose 4,6-dehydratase [Brucella abortus bv. 5 str. B3196] gi|23463899|gb|AAN33734.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis 1330] gi|148369448|gb|ABQ62320.1| NAD-dependent epimerase/dehydratase family protein [Brucella ovis ATCC 25840] gi|255997981|gb|ACU49668.1| NAD-dependent epimerase/dehydratase family protein [Brucella microti CCM 4915] gi|260154832|gb|EEW89913.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40] gi|260676798|gb|EEX63619.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str. 870] gi|260872035|gb|EEX79104.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str. C68] gi|260917605|gb|EEX84466.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str. Tulya] gi|261298596|gb|EEY02093.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94] gi|261302415|gb|EEY05912.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M163/99/10] gi|261736682|gb|EEY24678.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99] gi|261740009|gb|EEY27935.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|261743281|gb|EEY31207.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|262550572|gb|EEZ06733.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1] gi|264658824|gb|EEZ29085.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M292/94/1] gi|294819315|gb|EFG36315.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026] gi|297173507|gb|EFH32871.1| dTDP-glucose 4,6-dehydratase [Brucella abortus bv. 5 str. B3196] Length = 337 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 20 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 77 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 78 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 125 ----RIFQASTSEVYGDPHVHPQPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 181 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 241 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 289 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 290 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 322 >gi|16077795|ref|NP_388609.1| CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. subtilis str. 168] gi|2116765|dbj|BAA20116.1| YfnG [Bacillus subtilis] gi|2633041|emb|CAB12547.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. subtilis str. 168] Length = 301 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 25/292 (8%) Query: 46 ISQSNLF--------SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 + QSNL+ + ++ + D I AL E++ D + + AA++ V + Sbjct: 20 VPQSNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTF 79 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSS 155 NI+GT W+ L +K R + S+D+ YG + + E+MP Sbjct: 80 EANILGT----------WNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKH 129 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLY 214 PY +K+ +D + + HTYG+PV ++ C N YG ++IP I ++ G + Sbjct: 130 PYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIR 189 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 DG VRD+ Y+ED V+A L+ +K E N+ G + +I + L++ ++ K Sbjct: 190 SDGTFVRDYFYIEDAVQAYLLLAEK---MEENNLAGEAFNFSNEIQLTVLELVEKILKKM 246 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 S+ + + + + + + K + + W P ++ GL KT+ WY + Sbjct: 247 NSNLK-PKVLNQGSNEIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTE 297 >gi|288918195|ref|ZP_06412550.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288350365|gb|EFC84587.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 327 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 39/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAGF+GS LC L++D + V V + LT G N+++ + F L+ D+ Sbjct: 1 MRVVVAGGAGFLGSHLCDRLLDDGEEVVCVDNYLT--GRKNNIEHLLGRPGFELLEQDVS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + + DAI+ FA+ + E + GT L+ R Sbjct: 59 EQMTVPGTV-----DAILEFASPASPLDYARYPIETLKAGSHGTLHALDLAR-------- 105 Query: 121 DKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RFL ST EVYG ++ + P P S Y K ++ L A+ + + Sbjct: 106 --SKGARFLLASTSEVYGDPLVHPQEESYWGHVNPIGPRSMYDEAKRFAEALTTAYRNRH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + N YGP + + IP +++ + G V + GDG R YV+D V + Sbjct: 164 GIDTAIIRIFNTYGPRMRTDDGRAIPAFVSQALRGEPVTVAGDGMQTRSVCYVDDLVEGI 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-- 291 +L+ G G N+G +E ID + L+ A +P I+FI RPG D Sbjct: 224 VRMLRSGLPGP-VNLGNPHEMSIIDTARLVVELIGADVP--------IKFIP-RPGDDPM 273 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D + + ++ W P ++ GL +T+ W+ Sbjct: 274 VRRP--DITLARRQLDWEPVIDVRDGLLRTIEWF 305 >gi|167628897|ref|YP_001679396.1| nad-dependent epimerase/dehydratase [Heliobacterium modesticaldum Ice1] gi|167591637|gb|ABZ83385.1| nad-dependent epimerase/dehydratase [Heliobacterium modesticaldum Ice1] Length = 310 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 156/325 (48%), Gaps = 25/325 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGS + + +VLV+D L+ G ++ E + +F +D+ Sbjct: 1 MKLLVTGGAGFIGSHVVERCIARGD-EVLVVDDLS-TGKRENIPEKA-----AFFHLDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I+ + P+AI++ AA+ V S+ TNI+GT LLE +C Sbjct: 54 DDE-IKGVIAREAPEAIIHLAAQVDVQVSLRDPLHDARTNILGTLNLLE------ACRQS 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + S+ VYG + E+ P++PY +K + ++ + + YGI + Sbjct: 107 GVK---RMIVASSAAVYGDPLRLPVDEEHRLAPANPYGISKHTPEHYLQLYRELYGITGV 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP ++ + R++ G +YGDG+ RD++YV+D V A+ LVL Sbjct: 164 ALRFANVYGPRQDAAGEGGVVAIFTERLLRGIAPVIYGDGEQTRDFVYVDDVVDAMLLVL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + R+++ + + + L ALI + + RPG +D Sbjct: 224 EAETEQLRHSVYNVSTGRGTSV-----KALFALIRERVGVDLAAQMAPARPGDILHSYLD 278 Query: 298 SSKIKSEIGWFPQENMESGLNKTVC 322 + ++K +GW P+ + GL++TV Sbjct: 279 NRRLKDAVGWTPKTALPQGLDQTVA 303 >gi|258645828|ref|ZP_05733297.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403198|gb|EEW96745.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 337 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 51/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L+ + V D L+ G+ S+ E +F++ DI Sbjct: 1 MNILVTGGAGYIGSHTVRALMKSEEFTPFVFDNLS-TGHRESVPE-----EVAFIEGDIH 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +K ++ D +++FAA S V S++ ++ + N+ GT LL L Sbjct: 55 DIAFVAETMKRYEIDGVIHFAASSLVAESMVEPGKYYSNNVEGTLHLL---------LGM 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + ST VYG +K ED P+NP++ Y TK + ++ + YG+ + Sbjct: 106 RKAGVDKIVFSSTAAVYGEPEKTPIEEDFPHNPTNVYGRTKLVIEDMMRDFTAAYGLSYV 165 Query: 181 LSNCSNNYGPY--------HFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDW 223 N G H PE LIPL I + +G H+ +YG DG +RD+ Sbjct: 166 ALRYFNAAGAAEGGMIGEDHQPESHLIPL-ILKTAQGVRDHISIYGTDYPTPDGTCLRDY 224 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D A L +K G + + +N+G N GF + +I + T + Sbjct: 225 IHVLDLADAHVLAMKYLAGGGVSDVFNLGSEN-----------GFSVREIIEVAKKVTGV 273 Query: 281 -IRFIED--RPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWW 331 + +E+ R G S+K K +GW P + + E + W+L + + + Sbjct: 274 DFKVVEEGRRSGDPAALIASSAKCKKALGWNPTRSSTEEIIAAAWKWHLSHPYGY 328 >gi|221308565|ref|ZP_03590412.1| hypothetical protein Bsubs1_04083 [Bacillus subtilis subsp. subtilis str. 168] gi|221317814|ref|ZP_03599108.1| hypothetical protein BsubsJ_03993 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322088|ref|ZP_03603382.1| hypothetical protein BsubsS_04084 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314458|ref|YP_004206745.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis BSn5] gi|320020732|gb|ADV95718.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis BSn5] Length = 300 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 25/292 (8%) Query: 46 ISQSNLF--------SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 + QSNL+ + ++ + D I AL E++ D + + AA++ V + Sbjct: 19 VPQSNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTF 78 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSS 155 NI+GT W+ L +K R + S+D+ YG + + E+MP Sbjct: 79 EANILGT----------WNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKH 128 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLY 214 PY +K+ +D + + HTYG+PV ++ C N YG ++IP I ++ G + Sbjct: 129 PYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIR 188 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 DG VRD+ Y+ED V+A L+ +K E N+ G + +I + L++ ++ K Sbjct: 189 SDGTFVRDYFYIEDAVQAYLLLAEK---MEENNLAGEAFNFSNEIQLTVLELVEKILKKM 245 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 S+ + + + + + + K + + W P ++ GL KT+ WY + Sbjct: 246 NSNLK-PKVLNQGSNEIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTE 296 >gi|238019529|ref|ZP_04599955.1| hypothetical protein VEIDISOL_01398 [Veillonella dispar ATCC 17748] gi|237864228|gb|EEP65518.1| hypothetical protein VEIDISOL_01398 [Veillonella dispar ATCC 17748] Length = 370 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 158/347 (45%), Gaps = 28/347 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQ-----SNLF 52 ++VTG AGF+G+ L L+++ + Q++ ID + Y L L++I + N + Sbjct: 18 ILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKDYRLQQIDEMCKDNKNAW 77 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + +I D+ I ++P +VN AA++ V SI D +I +NIIG + +LE R Sbjct: 78 VFKKGNIADKAFIEEIFSTYKPRVVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACR 137 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAW 171 + + + S+ VYG+ + +S + NP S Y+ATK S++ L ++ Sbjct: 138 HSY---DNGESGVEHLVYASSSSVYGANKQIPYSTEHKVDNPVSLYAATKKSNELLAYSY 194 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y IP YGP P+ + G + ++ G RD+ Y++D V Sbjct: 195 AKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRSGGTIKIFNYGNCKRDFTYIDDIVE 254 Query: 232 ALYLVL------KKGRIG------ERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSH 277 + V+ + G G YNIG ++ +D V + + ++P+ Y+ Sbjct: 255 GVSKVMCAAPERRNGADGLPVPPYAIYNIGNSHPENLLDFVRILSEELVAAGVLPEDYNF 314 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+S ++ + G+ P ++ GL K WY Sbjct: 315 EDHKELVAMQPGDVPVTYADTSALEEDFGFKPNTSLREGLRKFAIWY 361 >gi|311069582|ref|YP_003974505.1| putative UDP-glucose epimerase [Bacillus atrophaeus 1942] gi|310870099|gb|ADP33574.1| putative UDP-glucose epimerase [Bacillus atrophaeus 1942] Length = 315 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 33/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG----NLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D V +D + + +++ + + F+F++ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKDNTVKGVDDMIGPTPFWLKVKNIETLLEEKRFTFVK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF---ITTNIIGTFILLEETRL 113 ++ + + L + DA+ + AA V S D+F + NI+ LLE Sbjct: 61 ENLLTAD-LSHLLADI--DAVYHLAAIPGVRTS--WGDQFHPYVHHNILALQRLLE---- 111 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +C Q K F+ ST VYG G SED +P SPY TK + + L + Sbjct: 112 --ACKQQPLK---AFIFASTSSVYGE-KLGKVSEDAELHPLSPYGVTKLTGEKLCRVYQK 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++ +PV+ YGP P+ I + ++ + +YGDG+ +RD+ ++ED V+ Sbjct: 166 SFNLPVITLRFFTVYGPRQRPDMAFHRFIKQHLDQKPLTIYGDGRQIRDFTFIEDCVKGT 225 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR-PGHD 291 VL++ IGE NIGG ++++ LL+ + S T++ DR G Sbjct: 226 AAVLQRQNLIGETLNIGGTARASLLEVI----SLLEEI-----SGTKIRLTFSDRVSGEP 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + D SK K + + P +++ GL K + Sbjct: 277 SQTWADISKAKQALNYAPAISLKDGLAKEFAY 308 >gi|56421831|ref|YP_149149.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] gi|56381673|dbj|BAD77581.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] Length = 323 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 160/349 (45%), Gaps = 51/349 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L + LV K QV+V+D NL++ + F+Q D+ ++ Sbjct: 2 ILVVGGAGYIGSHLVKELVE--KEQVIVLD------NLSTGHRYLVDDRAVFVQGDLGNK 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+++FAA S V S++ ++ N+ T LLE + L + Sbjct: 54 ADLEPIFGKYPIQAVMHFAANSLVGESVVNPLKYYQNNVAATLTLLE------TMLKYNV 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K+ F+ ST YG + L +ED P NP +PY +K + ++ + YG+ ++ Sbjct: 108 KN---FIFSSTAATYGIPNVELITEDCPTNPINPYGRSKLMIEQILADFASAYGLNYVVL 164 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPL + ++ + + ++G DG +RD+++V Sbjct: 165 RYFNAAGAHESGEIGEDHNPETHLIPLVLQHLLGQRDKISVFGTDYDTPDGTCIRDYIHV 224 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTE 279 D H+ AL +L + YN+G +G+ + +I K Sbjct: 225 TDLAKAHILALEALLSGKKKTAVYNLGNG-----------LGYSVKEVIETCEKVTGRKA 273 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +I + + RPG R S KI E+GW + ++E + W+ N Sbjct: 274 VIEYTDRRPGDPARLVASSQKIYEELGWKAEYSLEQIIESAWKWHSRNT 322 >gi|218248613|ref|YP_002373984.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801] gi|218169091|gb|ACK67828.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801] Length = 327 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 32/336 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +++TG AGFIG L + L++ ++ ID L Y +L L++I F F Q+D Sbjct: 4 ILITGAAGFIGFHLSQKLLHQ-GATIIGIDNLNSYYDVSLKKARLQQIETDKNFRFYQLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +R+ I + D +++ AA++ V S+ ++ +N++G +LE C Sbjct: 63 IANRKTISELFTQHTFDYVIHLAAQAGVRYSLENPHAYVDSNLVGFVNILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG+ K FS ED +P S Y+ATK +++ + + H Y + Sbjct: 117 HGRIK---HLVYASSSSVYGANKKIPFSTEDNVDHPISLYAATKKANELMAYTYSHLYRL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + ++ G + ++ +G+ RD+ Y++D V + V+ Sbjct: 174 PTTGLRFFTVYGPWGRPDMAYFMFTKAILAGEPIKVFNNGKMKRDFTYIDDIVEGIIRVM 233 Query: 238 KK---------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + G + YNIG N + ++++ I L L K+ + F+ +P Sbjct: 234 NRIPNPLESELGVPYKVYNIGNN---QPVELLKFIEILETCLGKKA-----IKNFLPMQP 285 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G D + ++G+ P +E GL + VCWY Sbjct: 286 GDVPMTYADIDDLMKDVGFRPDTPLEIGLEQFVCWY 321 >gi|168187551|ref|ZP_02622186.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum C str. Eklund] gi|169294549|gb|EDS76682.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum C str. Eklund] Length = 335 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 158/346 (45%), Gaps = 31/346 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L+ + VL +D L+ G L +++E ++ F F+Q DI Sbjct: 1 MNILVTGGAGFIGRWVVKTLLKEGH-NVLALDNLS-NGRLENIEEFKENKNFKFIQGDIK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D + + ++ Q D I + A +V SI + +GTF +LE+ ++ Sbjct: 59 DTKLLDDIFEKQQFDIIYHLGASINVQDSIDDPTTTFYNDTVGTFNILEKAKIQMFGKKA 118 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W ++K + + +ST VY ++ E P P SPY K +++ +V Sbjct: 119 KMDSDSWVIDKKEKTHLCKVVFMSTCMVYDKAEEKGIDELHPVKPVSPYGGAKIAAENMV 178 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I ++ + +YG G+ RD LY Sbjct: 179 LSYYNAYRLPTVVIRPFNTYGPFQKTGGEGGVVAIFIKNALDKKDLNIYGTGKQTRDLLY 238 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI---GFLLDALIPKSYSHTELIR 282 V+D R + + + + G I+ + +I G + + + +E+++ Sbjct: 239 VKDCARFVIMAGFNSNVDGQIVNAGTGRDVTINELADIISNGRVKINHVKHIHPQSEIMK 298 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + SK + + W P+ +E G+ +T W +N Sbjct: 299 LL-----------CNYSKAEKLMEWKPEYTLEEGIVETEGWIKTSN 333 >gi|148508213|gb|ABQ76001.1| predicted dTDP-D-glucose 4,6-dehydratase [uncultured haloarchaeon] Length = 132 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 9/140 (6%) Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYS 158 TN+ G LL + ++ D RFLQ STDE G + G FS + NP +PYS Sbjct: 2 TNVQGIQTLLN---------AANEADIDRFLQTSTDEACGQIIDGKFSGNDLLNPRNPYS 52 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQ 218 ATKA +D L ++ T+ +PV ++ SNN+GP E+LI I G + +YGDG Sbjct: 53 ATKADADLLAQSFQITHDLPVAITRTSNNFGPRRHSERLILKFIQNAAVGEILPVYGDGS 112 Query: 219 NVRDWLYVEDHVRALYLVLK 238 NVR+W+Y++D+ RA+ L L+ Sbjct: 113 NVREWIYIKDNCRAVDLTLR 132 >gi|224477831|ref|YP_002635437.1| capsular polysaccharide biosynthesis protein Cap I [Staphylococcus carnosus subsp. carnosus TM300] gi|222422438|emb|CAL29252.1| capsular polysaccharide biosynthesis protein Cap I [Staphylococcus carnosus subsp. carnosus TM300] Length = 337 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 MR+++TG AGFIGS L + L++ +V+ +D + Y L + L I + N F F + Sbjct: 1 MRILITGAAGFIGSHLAKKLISQ-GYEVIGVDNINDYYDPQLKEDRLASIGKDN-FKFYK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ + + + + +P+ +VN AA++ V S+ +I +NI+G +LE Sbjct: 59 TDLENFGELNAIFIKNKPEVVVNLAAQAGVRYSLENPMAYIDSNIVGFVNILE------C 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG+ K + D +P S Y+ATK S++ + + H Y Sbjct: 113 CRHHEVK---HLIYASSSSVYGANTSKPFATTDNIDHPLSLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G +RD+ YV+D V A+ Sbjct: 170 NLPTTGLRFFTVYGPWGRPDMALFKFTKAIVNDEEIDVYNHGNMMRDFTYVDDIVEAISR 229 Query: 236 VLKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +LK+ G+ YNIG N+ + ++ V I LD K+Y Sbjct: 230 LLKRPAQPNPEWSGDNPDPSSSYAPYKIYNIGNNSPVRLMEFVEAIENKLDKTAKKNY-- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG + + + I + P+ ++ G+NK + WYL+ Sbjct: 288 ------MDLQPGDVPETYANVDDLYNNIDFKPETTIQDGVNKFIDWYLN 330 >gi|219847095|ref|YP_002461528.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219541354|gb|ACL23092.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 318 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 30/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M +VTG AGFIGS L L+ + QV+ +D A +L + Q F+ ++ Sbjct: 1 MTYLVTGAAGFIGSHLVDRLLARGE-QVIGLDNFVAYYDPARKRRNLAQALQHAGFTLIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D E + + ++P A+ + AA SI + + N+ G+ ++LE+ + Sbjct: 60 GDIRDAETVAAIFSRYRPQAVAHLAAMPGPRPSIANPLLYESVNVGGSVVILEQ-----A 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C + + + ST VYG + F ED P + P SPY+ATK +++ L + Y Sbjct: 115 C----RAEVANIVIASTSSVYGKASRVPFREDDPTDRPLSPYAATKKAAEVLAYTFHSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALY 234 GIP + YGP P+ L + RM+ + L+ G N+ RD+ Y++D V + Sbjct: 171 GIPTSVVRFFTVYGPRGRPDMTPYLFVERMVRHQPITLFNGGVNLFRDYTYIDDIVSGVM 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L + R E +N+G + + V LL+ + T IE +P Sbjct: 231 NALDRPRPYEIFNLGHSQPVELCRFV----QLLEQI-------TGYAAKIEVKPLPATEP 279 Query: 295 AI---DSSKIKSEIGWFPQENMESGLNKTVCWY 324 I D++K + + P +E GL + WY Sbjct: 280 PITFADTAKAGQLLDFVPTIAIEEGLERFWAWY 312 >gi|148264348|ref|YP_001231054.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146397848|gb|ABQ26481.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 324 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 99/345 (28%), Positives = 157/345 (45%), Gaps = 38/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--------SLKEISQSN 50 MR++VTGGAGFIGS L L++ V++ID Y L E + N Sbjct: 1 MRILVTGGAGFIGSHLVERLISSGH-DVVIIDNFNDFYDPQLKRRNFSEIVGTAEEGEQN 59 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L + DI D + +++ + + DA+++ AA + V SI + NI GT +LE Sbjct: 60 LI-LCEGDIRDADFVKAVVLQESVDAVIHLAAAAGVRPSIENPLFYEEVNIRGTMNILEA 118 Query: 111 TRLWWSCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLV 168 R RFL S+ VYG+ K FSE P + P SPY+ATK + + + Sbjct: 119 ARTAG----------VRFLLFASSSSVYGNSFKTPFSESDPVDHPISPYAATKKAGELIC 168 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVE 227 + H Y + + YGP P+ I TR+I +G V YGDG RD+ ++ Sbjct: 169 HTYHHLYKMNIACLRFFTVYGPRQRPDLAIN-KFTRLIDQGKAVPFYGDGTTSRDYTFIN 227 Query: 228 DHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D + +AL V + +N+GG+ E+ L++ ++ ++ Sbjct: 228 DIIAGVEKALSWVCSVEPRYDIFNLGGSRP-------VELSRLVE-ILESELGKKAILDR 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + +PG D +K S +G+ P ++E GL + WY +NN Sbjct: 280 LPMQPGDVHITFADLAKSGSILGYQPVTSIEEGLRAFIRWYKENN 324 >gi|223940543|ref|ZP_03632390.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223890777|gb|EEF57291.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 437 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 97/352 (27%), Positives = 156/352 (44%), Gaps = 43/352 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQVDIC 60 +++TGGAGFIG+ + ++ + VL+ + L+ G +L+ + + +L I Sbjct: 38 VLITGGAGFIGTNVAHRFLSKGQ-PVLIYENLSRPGVQRNLEWLQKTHGDLLEVEIAGIQ 96 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + IR A + + +FAA+ V S+L N GT LLE R LS Sbjct: 97 DADKIRRAAR--HASKVFHFAAQVAVTSSLLDPVHDFEVNARGTLNLLEGLR----SLST 150 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNP------------------SSPYSATK 161 L ST++VYG L D L D Y P SPY +K Sbjct: 151 PPP----LLFTSTNKVYGDLHDVDLQMRDGRYEPVDPLLRTHGFNESRQLDFHSPYGCSK 206 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQ 218 + VL + T+ +P + + S YGP+ F + + + + + + +YGDG+ Sbjct: 207 GCACEYVLDYARTFKMPAVAFHMSCIYGPHQFGNEDQGWVAHFLIQALRNKPITVYGDGR 266 Query: 219 NVRDWLYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD L+VED + A L + G+ +NIGG+ N + E L ALI Sbjct: 267 QVRDILFVEDLIDAFLLAHENIGSFSGQAFNIGGSP--ANTSSLIE----LLALIKNLQG 320 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + F + RP R Y D K S GW P+ +++ G+++ W +N+ Sbjct: 321 NEPEVHFDDWRPADQRYYVSDIRKFSSATGWAPKVDVQQGVSRLFHWLKENH 372 >gi|152977625|ref|YP_001377142.1| UDP-glucose 4-epimerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026377|gb|ABS24147.1| UDP-glucose 4-epimerase [Bacillus cytotoxicus NVH 391-98] Length = 339 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 56/362 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + +N +KEI+ + F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSEEAINRVKEITGRS-FPFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALHAIFEENTIEAVIHFAGLKAVGESVEIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL----VLA---W 171 +K + + + S+ VYG + +ED P + ++PY TK + + V+A W Sbjct: 110 VMEKHNVKKMIFSSSATVYGIPETSPITEDFPLSATNPYGQTKLMIEQILRDVVVADPEW 169 Query: 172 GHTYGIPVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGS---HVFLY 214 V+L N +G P P L+P +A+ ++ E S + + Sbjct: 170 S------VVLLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPT 223 Query: 215 GDGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 DG VRD+++V D HV+AL VLK I + YN+G +++V + Sbjct: 224 KDGTGVRDYIHVVDLANGHVKALEKVLKTTGI-DAYNLGTGTGYSVLEMVKAFEKVSGRK 282 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +P + E RPG D+SK K E+GW + +E + W ++N Sbjct: 283 VP--------YKITERRPGDVAICYADASKAKRELGWEAKRGLEEMCADSWRWQVNNKNG 334 Query: 331 WR 332 +R Sbjct: 335 YR 336 >gi|206602020|gb|EDZ38502.1| UDP-glucuronate 5'-epimerase [Leptospirillum sp. Group II '5-way CG'] Length = 341 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 165/349 (47%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIGS L L+ + V+ +D + Y +L L + + F+F + Sbjct: 1 MQILVTGAAGFIGSTLSLRLLREGH-DVVGLDNMNDYYEVSLKEARLARLQAHDRFTFHR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR I + A+ + AA+ V ++ ++ TN+ G +LE + Sbjct: 60 LDIVDRNRILDLFWQENFPAVYHLAAQVGVRYALENPFAYMDTNLGGFGNILEGSL---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTY 175 + + + S+ VYG+ + FSE P +P S Y+ATK +++ + ++ H + Sbjct: 116 -----RGNTRHLIYASSSSVYGANVRQPFSEHHPTEHPISLYAATKKANELMAHSYAHIH 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV YGP+ P+ + ++EG + +YG+G+ +RD+ YV+D V +L Sbjct: 171 GLPVTGLRFFTVYGPWGRPDMALFKFARLIVEGHSIPVYGEGKMIRDFTYVDDIVESLVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L K YNIG N + ++ I L L K+ Sbjct: 231 LLDKPPAPSSNWDAMAADSATSHAPYRIYNIGNKNP---VPLMRYIEVLEQCLGRKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG D++++++ G+ P ++E+G+ + V WYL+ Sbjct: 285 --VKEFLPVQPGDMASTWADTAELEALTGFTPNTSIETGIRRFVDWYLE 331 >gi|190890456|ref|YP_001976998.1| nucleoside-diphosphate-sugar epimerase [Rhizobium etli CIAT 652] gi|190695735|gb|ACE89820.1| putative nucleoside-diphosphate-sugar epimerase protein [Rhizobium etli CIAT 652] Length = 326 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 138/325 (42%), Gaps = 21/325 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTG GFI S L LV ++V + + + L + F + D+ D Sbjct: 3 KALVTGADGFIASHLVETLVRS-GVEVCALCQYNSFSSWGWLDQSEYRGKFEVILGDVRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +RS K D I + AA + S +I TN+ GT +L+ Sbjct: 62 PAQMRSVAKGV--DTIFHLAALIAIPYSYQAPSSYIDTNVHGTLNVLQGAL--------- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R +Q ST EVYG+ SE P SPYSA+K +D + ++ ++ +PV + Sbjct: 111 DAGVGRVIQTSTSEVYGTARFVPISESHPLQAQSPYSASKIGADAIAYSYHSSFDLPVTI 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 + N YGP +IP I++++ G G RD+ +V+D L L Sbjct: 171 ARPFNTYGPRQSARAVIPTVISQLLSGRTTLKLGALSPTRDFNFVQDTCDGFLALAACDE 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAIDS 298 +G+ NIG +E D V I ++ + L RP + R D+ Sbjct: 231 AVGQTVNIGSGSEISIGDTVRLIADIIGVSVEIECDEQRL------RPVNSEVERLCCDN 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 S IKS G+ P+ ++E GL T+ W Sbjct: 285 SLIKSLTGFSPRYSLEDGLRATIEW 309 >gi|21227264|ref|NP_633186.1| UDP-N-acetylglucosamine 4-epimerase [Methanosarcina mazei Go1] gi|20905612|gb|AAM30858.1| UDP-N-acetylglucosamine 4-epimerase [Methanosarcina mazei Go1] Length = 334 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 26/338 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQV 57 ++++TGGAGFIGS + L D +++++D L Y+ +L +L S +F+ Sbjct: 3 KIVITGGAGFIGSHIAENLAKDGH-EIVIVDNLDPYYSVDLKKKNLNIALNSGDATFINA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I+ + + D + + AA++ V S+ + N+ GT +L+ + Sbjct: 62 DVTDLSGIKDVI-DSTVDYVYHEAAQAGVRISVEDPFKPNDVNVHGTLNVLK------AS 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L K + + S+ VYG + F E P P SPY +K ++++ + YG+ Sbjct: 115 LDAGVK---KVINASSSSVYGKVKYLPFDEQHPTEPVSPYGVSKLAAEHYCRVFYEVYGL 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 P YGP P+ I + +M+ + ++GDG+ RD+ Y+ED V A L+ Sbjct: 172 PTTSLRYFTVYGPRMRPDLAISIFTRKMLANEPITVFGDGEQTRDFTYIEDVVEANKRLL 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G+ NIGG N + L++ L + S +E+I D+ D + Sbjct: 232 YNRATDGKVLNIGGGNR-------ISVNNLIENLRFITGSTSEIIN--ADKQKGDTEDTL 282 Query: 297 DSSKIKSE-IGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + + + IG+ P N+ GLNK V W+ N P Sbjct: 283 ANVDLGNNMIGYTPLFNINKGLNKFVDWFKTENQCRDP 320 >gi|329922326|ref|ZP_08278003.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] gi|328942189|gb|EGG38460.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] Length = 392 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 33/325 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS L LVN +V VID LT G L+S + L V Sbjct: 80 MKMVVTGGAGFIGSHLVNGLVNQ-GYEVHVIDNLTTGDPGRLHSE---------AILHVA 129 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + + +PD + + AA++ V RSI N++GT +L+ R Sbjct: 130 DVNSQQTTAYISVLKPDVVFHLAAQADVQRSIQEPRLDADANVMGTINILDACR------ 183 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + ST VYG L++ +ED P NP S Y+ +K + + + + +G+ Sbjct: 184 ---KAGVRKIVFASTSGVYGDLERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQ 240 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + ++ + R+ +G + +YGDG RD++YV+D V A Sbjct: 241 YTILRYGNVYGPGQTAKGEGGVVAVFGERLYQGKPLPIYGDGLQTRDFIYVKDVVDANLA 300 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G + G + N L+D LI + + + ++ + G R Sbjct: 301 SILHGDQSVLHVSTGTDHSVNT--------LVD-LISRLHPDRIDVDYLPAKIGDIRHSC 351 Query: 296 IDSSKIKSEIGWFPQENMESGLNKT 320 +++ + + + W P ++E G+ +T Sbjct: 352 LNNERTRERLRWSPLFSLEEGMEET 376 >gi|71909541|ref|YP_287128.1| NAD-dependent epimerase/dehydratase [Dechloromonas aromatica RCB] gi|71849162|gb|AAZ48658.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [Dechloromonas aromatica RCB] Length = 335 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 159/361 (44%), Gaps = 65/361 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L+ +V+ +D + Y +L N LK ++ F F++ Sbjct: 1 MKILVTGAAGFIGMTTSLRLLARGD-EVVGLDNMNDYYEVSLKENRLKRLTALPGFRFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + + D +++ AA++ V SI ++ +N++G +LE R Sbjct: 60 LDVGDRAGMEKLFADEKFDKVIHLAAQAGVRYSIQNPHAYVDSNLVGFINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG K FSE D +P S Y+ATK +++ + + H Y Sbjct: 116 ----HHKVQ-HLVYASSSSVYGGNTKMPFSEHDSVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++EG + ++ G RD+ YV+D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGNMKRDFTYVDDIVEGVIR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLL---------- 267 V+ + +NIG NN + +D + I L Sbjct: 231 VMDRNAAANAEYDSLSADPATSNAPYRVFNIGNNNPVQLLDFIGAIETALGQKAEKRLLP 290 Query: 268 --DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D +P +Y++T+L + +G+ P +++ G++K + WY Sbjct: 291 LQDGDVPATYANTDL--------------------LNDWVGFVPGTSVQEGVSKFIAWYR 330 Query: 326 D 326 D Sbjct: 331 D 331 >gi|261406329|ref|YP_003242570.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] gi|261282792|gb|ACX64763.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] Length = 305 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 33/325 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS L LVN +V VID LT G L+S + L V Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQ-GYEVHVIDNLTTGEPGRLHS---------EAILHVA 50 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + + +PD + + AA++ V RSI N++GT +L+ R Sbjct: 51 DVNSQQTTAYISVLKPDVVFHLAAQADVQRSIQEPRLDADANVMGTLNILDACR------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + ST VYG L++ +ED P NP S Y+ +K + + + + +G+ Sbjct: 105 ---KAGVRKIVFASTAGVYGDLERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQ 161 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + ++ + R+ +G+ + +YGDG RD++YV+D V A Sbjct: 162 YTILRYGNVYGPGQTAKGEGGVVAVFGERLYQGAPLPIYGDGLQTRDFIYVKDVVDANLA 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G + G + N ++D LI + + + ++ + G R Sbjct: 222 SILHGDQSVLHVSTGTDHSVNT--------IVD-LISRLHPDRIDVDYLPAKIGDIRHSC 272 Query: 296 IDSSKIKSEIGWFPQENMESGLNKT 320 +++ + + + W P ++E G+ +T Sbjct: 273 LNNERTRERLRWSPLFSLEEGMEET 297 >gi|27381031|ref|NP_772560.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] gi|27354197|dbj|BAC51185.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] Length = 329 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 32/338 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQVD 58 ++VTG AGFIG + R L+ + + V+ +D L A L+ + + FSF++ D Sbjct: 6 ILVTGAAGFIGFHVARQLLAEGR-PVIGLDNLNSYYDPALKQARLELLRSDSRFSFVKAD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE I + + +V+ AA++ V SI + +N++G +LE C Sbjct: 65 LADRETIAALFGQHAFAKVVHLAAQAGVRYSIEHPQAYADSNLLGFLNVLE------GCR 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ VYG+ K F+ +D +P S Y+ATK +++ + ++ H Y + Sbjct: 119 NNGCR---HLVYASSSSVYGANTKLPFAVQDRTDHPVSFYAATKKANEVMAQSYSHLYRL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV YGP+ P+ + L + ++ G+ + L+ G+ RD+ Y++D R + ++ Sbjct: 176 PVTALRFFTIYGPWGRPDMAMFLFVNAIMAGTPIRLFNHGRMRRDFTYIDDVTRVVSKLI 235 Query: 238 KK---------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + + YN+G + + + +V L+ + T + + +P Sbjct: 236 DRVPADDPAAANAPSKVYNVGNHRPEELMHVV--------GLLEQELGRTAIKELLPMQP 287 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 G D + + G+ P +E G+ V WY D Sbjct: 288 GDVLETFADVEDLMRDTGFAPSTPIEHGVRNFVTWYRD 325 >gi|256830802|ref|YP_003159530.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256579978|gb|ACU91114.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 335 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 44/356 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG L R + V +D L Y+ L + LK + Q F F Sbjct: 1 MKILITGAAGFIGFHLARRFLA-TGTSVFGLDNLNDYYSVELKKDRLKLLQQDANFHFEP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D + + K + +VN AA++ V S+L +I +NI+G LLE Sbjct: 60 IDLADGAALDAYFKANKFTHVVNLAAQAGVRYSLLNPKSYIDSNIVGFANLLE------C 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C D K + S+ VYG FS D +P S Y+A+K S++ + + + Y Sbjct: 114 CRHNDTK---HLVYASSSSVYGLNTSMPFSVHDNVDHPVSLYAASKKSNELMAHTYSYLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L + E + ++ G+ RD+ Y++D V ++ Sbjct: 171 KLPTTGLRFFTVYGPWGRPDMALYLFTKAICENKPINVFNHGKMRRDFTYIDDIVEGVFR 230 Query: 236 VLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ G + YNIG NN +++ I L +AL K+ Sbjct: 231 IVSHVPTGNPDWDGKNPDPSTSPAPYKLYNIGNNN---TVELEQFITVLENALGRKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + +++ +PG + + E+G+ P ++E G+ K + WY D ++RP Sbjct: 285 --VRNYMDIQPGDVPATYANIDDLIKEVGFKPSTSIEEGIEKFIAWYKD---YYRP 335 >gi|91215544|ref|ZP_01252515.1| putative udp-glucuronic acid epimerase [Psychroflexus torquis ATCC 700755] gi|91186496|gb|EAS72868.1| putative udp-glucuronic acid epimerase [Psychroflexus torquis ATCC 700755] Length = 340 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 45/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLT-------YAGNLNS 42 +++VTG AGFIG LC+ L+ ND L D+L A N Sbjct: 3 KILVTGAAGFIGFHLCKTLIKENYLIIGLDNINDYYDVNLKFDRLKELGVEREKAAIFNK 62 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 + N F F+++++ D + I ++ + D +VN AA++ V SI ++ +N++ Sbjct: 63 ETSSNSFNNFKFIRLNLEDTDAISKLFEKEKFDEVVNLAAQAGVRYSIQNPRAYVQSNLV 122 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G +LE R D K + L S+ VYG K FS D +P S Y+ATK Sbjct: 123 GFLNILEGCR--------DTKVK-HLLYASSSSVYGENKKTPFSVPDNVDHPISLYAATK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H Y IP YGP+ P+ + L +IEGS + ++ G+ R Sbjct: 174 KSNELMAHTYSHLYDIPTTGLRFFTVYGPWGRPDMALFLFTKAIIEGSSINVFNKGKMSR 233 Query: 222 DWLYVEDHVRALYLVLK------KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 D+ Y++D + + + L K ++ R +NIG + D + + I KS Sbjct: 234 DFTYIDDIISGIEISLSLPPSKDKQQVPYRIFNIGKGSPETLEDFI--------SCIEKS 285 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + D S +K +G+ +E G++K V WY Sbjct: 286 LDKKAHKKMLPIQPGDVPKTWADISDLKG-MGYKSSTPIEKGVDKFVKWY 334 >gi|289665404|ref|ZP_06486985.1| NAD-dependent epimerase/dehydratase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 306 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 51/330 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L+VTG GF+G ++L++ + + + GN +L + + D+ D Sbjct: 7 KLLVTGAGGFVG----KHLLD-------AVGRGQF-GNFEALPLPAGT--------DLRD 46 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE-TRLWWSCLSQ 120 R I SAL + PDA+V+ AA+S V +S +E + N+IGT LL+ R +S Sbjct: 47 RAAIESALGDVCPDAVVHLAAQSFVPQSFDDPEETLQINLIGTLHLLQALARKGFSG--- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWGHT 174 RFL +S+ ++YG + + D+P + P SPY+ +K +++ L + W + Sbjct: 104 ------RFLYVSSGDIYGRVPE----SDLPVDETLLPEPRSPYAVSKCAAEQLCMQWHRS 153 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDH 229 + V+++ N+ G F + + + EG + V GD RD+ V D Sbjct: 154 EKLDVVIARPFNHVGAGQGDRFVLSSLARQVVAIAEGRQAAVIEAGDIDTTRDFSDVRDI 213 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A +L +GR GE Y + ER+ D++ E+ L ++ RP Sbjct: 214 VSAYAALLTRGRSGETYIVASGVERRVRDLLIEMCRLTGVEAEVRQDSAKM------RPA 267 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 RR +K++ + GW +++S L++ Sbjct: 268 EQRRMVASPAKLQRDTGWMQAFDIQSTLSE 297 >gi|302028151|gb|ADK90965.1| RfbB2 [Neisseria meningitidis] Length = 99 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 46/89 (51%), Positives = 68/89 (76%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL +I+ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSI 90 R + + +PDA+++ AAESHVDRSI Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSI 91 >gi|74318717|ref|YP_316457.1| nucleoside-diphosphate-sugar epimerase [Thiobacillus denitrificans ATCC 25259] gi|74058212|gb|AAZ98652.1| nucleoside-diphosphate-sugar epimerase [Thiobacillus denitrificans ATCC 25259] Length = 336 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 45/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIG + + L+ +V+ ID L A L L+++ F F++ Sbjct: 1 MKILVTGAAGFIGMHVAQILLQRGD-EVVGIDSLNDYYDPALKLARLEQLKPHPNFRFVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR + ++ DA++N AA++ V S+ ++ +N++G LLE Sbjct: 60 DDISDRMVMEDLFEKGHFDAVINLAAQAGVRYSLKNPHAYVQSNLVGFANLLE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C K F+ S+ VYG+ K FS P N P S Y+A+K +++ + + H Y Sbjct: 114 CRHHGVK---HFVYASSSSVYGANTKIPFSTHDPVNHPVSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ L + ++EG + ++ G +RD+ Y++D Sbjct: 171 GLPTTGLRYFTVYGPWGRPDMSPWLFTSAILEGRSIDVFNHGDMMRDFTYIDDIADGTVK 230 Query: 236 VLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VL RI + YNIG + + +D + I K+ Sbjct: 231 VLD--RIPQPDPNFDHANPDPASSHAPYRVYNIGNHTPVQLMDFI--------GTIEKAL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ + G + D + + G+ P +E G+ K V WY Sbjct: 281 GQEARKNFLPMQDGDVKMTYADVDDLIRDTGFKPATTLEYGIGKWVEWY 329 >gi|729026|sp|P39858|CAPI_STAAU RecName: Full=Protein CapI gi|506705|gb|AAA64648.1| type 1 capsule synthesis gene [Staphylococcus aureus] Length = 334 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIGS L + L+ V+ +D + Y+ +L + LK I + N F+F + Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHY-VIGVDSINDYYSVSLKEDRLKSIGKEN-FTFNK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V + + + + + QP+ +VN AA++ V SI +I +NI+G +LE +R + Sbjct: 59 VKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHF-- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ FS D +P S Y+ATK S++ + + H Y Sbjct: 117 -------NIQNLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G +RD+ YV+D V A+ Sbjct: 170 NLPTTGLRFFTVYGPWGRPDMALFKFTKAIVNDQAIDVYNHGNMMRDFTYVDDIVEAISR 229 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++KK + YNIG N+ + ++ V I L K+Y Sbjct: 230 LVKKPASPNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNY-- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG + + +I + P+ ++ G+NK V WYL+ Sbjct: 288 ------MDLQPGDVPETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLE 330 >gi|146296609|ref|YP_001180380.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410185|gb|ABP67189.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 305 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 161/327 (49%), Gaps = 30/327 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V V+D L+ AGNL ++ ++ F ++DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-EKNYDVCVVDNLS-AGNLKNINPKAK-----FYKLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + KE + + ++ AA+ V +S+ + NI+GT LL C Sbjct: 53 -RDNLEDIFKENKIEYCIHQAAQVSVTKSMEDPILDCSVNILGTLNLLS------FCAKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K +F+ S+ VYG E P NP S Y +K +++ + + ++G + Sbjct: 106 EIK---KFIYASSAAVYGEPQYLPIDESHPKNPMSFYGISKLTAEKYIERFAQSHGFEYV 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P +I + RM V ++GDG RD+++VED A YL L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVISIFCERMQNNKDVTIFGDGNQTRDFIFVEDVAEANYLAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + I +N+ N R +I+ +F +I + + + + RPG + +D Sbjct: 223 QN-PIKGTFNL-STNTRVSINELF-------GIISGLTGYQKSAVYTQKRPGDIQHSTLD 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 +S +KS + W P+ +++ GL KT+ ++ Sbjct: 274 NSLLKSLLSWSPKYSLKEGLTKTIEYF 300 >gi|257061677|ref|YP_003139565.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802] gi|256591843|gb|ACV02730.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802] Length = 327 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 157/336 (46%), Gaps = 32/336 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 +++TG AGFIG L + L++ ++ ID + Y +L L++I F F Q+D Sbjct: 4 ILITGAAGFIGFHLSQKLLHQ-GATIIGIDNINSYYDVSLKKARLQQIETDKNFRFYQLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +R+ I + D +++ AA++ V S+ ++ +N++G +LE C Sbjct: 63 IANRKTISELFTQHTFDYVIHLAAQAGVRYSLENPHAYVDSNLVGFVNILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG+ K FS ED +P S Y+ATK +++ + + H Y + Sbjct: 117 HSHIK---HLVYASSSSVYGANKKIPFSTEDNVDHPMSLYAATKKANELMAYTYSHLYRL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + ++ G + ++ +G+ RD+ Y++D V + V+ Sbjct: 174 PTTGLRFFTVYGPWGRPDMAYFMFTKAILAGEPIKVFNNGKMKRDFTYIDDIVEGIIRVM 233 Query: 238 KK---------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 K+ G + YNIG N + ++++ I L L K+ + F+ +P Sbjct: 234 KRIPNPLESELGVPYKVYNIGNN---QPVELLKFIEILETCLGKKA-----IKNFLPMQP 285 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G D + ++G+ P +E GL K V WY Sbjct: 286 GDVPMTYADIDDLMKDVGFRPDTPLEIGLEKFVSWY 321 >gi|218528253|ref|YP_002419069.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|218520556|gb|ACK81141.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] Length = 363 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 151/347 (43%), Gaps = 43/347 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+G+ L L + + VLV D LT G +L +++ + + V R Sbjct: 12 VLVTGGAGFVGANLADQLAAEGQT-VLVYDALTRPGVEANLAWLTERHGARIVPVIADIR 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + AL + A+ +FAA+ V S+ E + N+ GT LLE R + Sbjct: 71 DGAELALAVREAGAVFHFAAQVAVTTSMTAPREDMEVNLGGTLTLLEALRA--------R 122 Query: 123 KDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSATKAS 163 + L ST++VYG L D L ED P + +PY +K + Sbjct: 123 RGAVPLLFASTNKVYGGLPDVELAVEGDAYRPTDPNLRAHGVGEDRPLDFHTPYGCSKGA 182 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNV 220 +D VL + +YG+P ++ S YGP + + + R + V LYGDG+ V Sbjct: 183 ADAYVLDYARSYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALTNRTVTLYGDGRQV 242 Query: 221 RDWLYVEDHVRALYLVLKK-GRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 RD L+V D V A L + R+ G +N+GG +N ++ +G LL + Sbjct: 243 RDILHVRDAVAAYRAALARIDRVAGRAFNLGGGPDNAVSLRGLIAYLGTLLGREVG---- 298 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I RPG R Y D+ + S +G P G+ W Sbjct: 299 ----IETGAWRPGDQRYYVSDTRRAASMLGLEPPLPWREGVADLAAW 341 >gi|203287887|ref|YP_002222902.1| nucleotide sugar epimerase [Borrelia recurrentis A1] gi|201085107|gb|ACH94681.1| nucleotide sugar epimerase [Borrelia recurrentis A1] Length = 352 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 91/362 (25%), Positives = 165/362 (45%), Gaps = 54/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-----------------AGNLNSL 43 MR+++TG AGFIG + + L +D +VL ID L + N++S Sbjct: 1 MRVLLTGIAGFIGFHVAKKLADDGH-EVLGIDILNNYYDPSLKYERLEILGFNSENIDSK 59 Query: 44 KEIS--QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 K ++ + N SF+ +DI ++E + S ++ I + AA++ + SI D +I NI Sbjct: 60 KVVNSHKYNNLSFVNLDILNKEQVLSLFNNYKFTHICHLAAQAGIRDSIENPDSYIAINI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G F +L+ R++ + F+ ST VYG +K SED + +P + Y+A+ Sbjct: 120 VGFFNILDACRIYKDSIEH-------FVYASTSAVYGLNEKMPSSEDSITDHPLNLYAAS 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ ++ IP YGPY P+ + L ++ S + ++ +G Sbjct: 173 KKSNEVIAHAYSSSFNIPTTGLRFFTVYGPYGRPDMALYLFADGVMRQSTINVFNNGDMA 232 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ YV+D V + VLKK + YN+G K ++ + E Sbjct: 233 RDFTYVDDVVNGVCNVLKKPARSDSNFDKQNPNSSSSFAPYRIYNVGTGQAVKLMEFINE 292 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + L+ K++ + +E D SK+K++ + +++ G+ K Sbjct: 293 LEINLENKACKNFLPMQKADVVES--------CCDISKLKNDFAYEALTSIKDGIRKFAI 344 Query: 323 WY 324 WY Sbjct: 345 WY 346 >gi|95929367|ref|ZP_01312110.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM 684] gi|95134483|gb|EAT16139.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM 684] Length = 310 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 30/325 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +I+TGGAGFIGS L L+ D V VID + G ++L SN + ++DIC Sbjct: 1 MHIIITGGAGFIGSHLTEMLL-DQGHSVTVIDNFS-TGKRSNLP--GSSNHLTVHELDIC 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + + K DAIV+ AA + V S+ E N+ GT +LE R+ Sbjct: 57 NFEGVLNHTK--GADAIVHLAAIASVQASVEAPRETHAINLDGTINMLEVARI------- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D F+ S+ +YG+ + ED P P +PY+ K S+Y + + + + Sbjct: 108 --HDISTFVFASSAAIYGNNQQLPLKEDTPPAPLTPYAVDKLGSEYYIDFYCRQFKLKTT 165 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-YL 235 N YGP P +I + + R ++GDG RD+++V+D V L Sbjct: 166 TFRFFNVYGPRQDPSSPYSGVISILMDRAQNKRPFTVFGDGLQSRDFIFVKDLVEILCKA 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRY 294 ++ G N+G + ++++ + +S S+ +L F E RPG + Sbjct: 226 ATQQAPSGNTINLGNGIQTTLLELLSTV---------ESLSNHKLDTSFEEPRPGDIKHS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNK 319 D+++++ + P+ N+ GL + Sbjct: 277 CADNTRLRQLFSYTPKTNIAEGLKQ 301 >gi|289748306|ref|ZP_06507684.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T92] gi|289688893|gb|EFD56322.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T92] Length = 328 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 33/333 (9%) Query: 6 TGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECI 65 TG +G G+ L+ + V V+DK + + +++ + +F+ + D + I Sbjct: 8 TGVSGHAGAVQTESLLANGH-WVTVLDKSSRNA-VRNMQGFRSHDRAAFISGSVTDGQTI 65 Query: 66 RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQ 125 A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R + + Sbjct: 66 DRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRN--------- 114 Query: 126 FRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + +ST EVYG +L +G E P+SPY A+KA++D L ++ +YG+ V + Sbjct: 115 -RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTI 173 Query: 182 SNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +G + LIP + + I G + ++G G RD+LYV D V A LVL+ Sbjct: 174 VRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAYNLVLR 233 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G+ N + + DIV + A I + RPG +R+ D Sbjct: 234 TPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR----------DARPGEVQRFPAD 283 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 S KS IG+ PQ + +++ + W D + Sbjct: 284 ISLAKS-IGFQPQVEIWDSIDRYINWAKDQPQY 315 >gi|330507807|ref|YP_004384235.1| NAD-dependent nucleotide sugar epimerase [Methanosaeta concilii GP-6] gi|328928615|gb|AEB68417.1| NAD-dependent nucleotide sugar epimerase [Methanosaeta concilii GP-6] Length = 318 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 147/330 (44%), Gaps = 26/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQVD 58 ++VTGGAGFIGS L +ND VL +D A +++ F+ L+ D Sbjct: 5 IVVTGGAGFIGSYLVERFINDGH-DVLCLDNFDNYYDPAIKRDNVTRFKNKENFTLLKGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ + AL D + + AA++ V S+ + N +GT +L+ C Sbjct: 64 ILDRDMVHKALN--GADCVFHLAAQAGVRASVKDPIKVHEINTMGTLNILQAA---LDCG 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + S+ +YG + F E P P SPY +K ++ + YG+ Sbjct: 119 VK------RLVYASSSSIYGKVKYLPFDESHPRVPVSPYGLSKLMAEEYCRIFSEIYGLE 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + YGP P+ I + R ++ + ++G G+ RD+ Y++D V A L +K Sbjct: 173 TVSLRYFTVYGPRMRPDLAISIFANRALQDLPLEIFGPGEKTRDFTYIDDVVCANALAMK 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 R +NIG + + L + +I + S ++++ F ED G + ++ Sbjct: 233 CNR--GVFNIGSGHR-------ISVKELAELIIQLTGSRSKIV-FREDARGDAQHTWANT 282 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + K ++GW + +E GL + + W N Sbjct: 283 DRAKVKLGWSSKVGIEEGLKRYIKWLTTRN 312 >gi|83309176|ref|YP_419440.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] gi|82944017|dbj|BAE48881.1| Nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum AMB-1] Length = 339 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 146/334 (43%), Gaps = 26/334 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV D++ L + G L++ + +++L FL D Sbjct: 9 KILVTGADGFIGSHLTEELVRRGYDVRAFAL-YNSFGSWGWLDAAEPAVRNSLDVFLG-D 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D +R A++ DA+++ AA + S ++ TN+ GT +++ R Sbjct: 67 IRDPHGVRKAMEGC--DAVLHLAALIAIPYSYHSPATYVETNVTGTLNVVQAARDLGVS- 123 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ ED P SPYSATK +D + L++ ++ P Sbjct: 124 --------RVVCTSTSEVYGTARYVPIDEDHPLQGQSPYSATKIGADQMALSYHRSFATP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT++ G+ G RD+ YV D +L Sbjct: 176 VTVLRPFNTYGPRQSARAVIPTIITQIAAGARTLKLGALHPTRDFSYVADTAAGFIAMLN 235 Query: 239 KGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +GE NIG E D I ++ A + + R ++ +R +A Sbjct: 236 APETVLGEVINIGSGFEISIGDTARLIAEVMGAQVDITCDDQ---RLRPEKSEVERLFA- 291 Query: 297 DSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 + K +GW P E GL +TV W+ D Sbjct: 292 GTDKAARLLGWQPAHGGLEGFRRGLAETVRWFSD 325 >gi|115380334|ref|ZP_01467339.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|310821283|ref|YP_003953641.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|115362664|gb|EAU61894.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|309394355|gb|ADO71814.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] Length = 314 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 28/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + + +V+ +D N++S K + +++DI Sbjct: 1 MKVLVTGGAGFIGSHVSDEFLR-AGHEVIALD------NMSSGKRENLDPKVRLVELDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + ++ +P I + AA+ V RS+ NI+G LLE R S Sbjct: 54 SPEAA-ALIRSERPQVICHLAAQMDVRRSVEDPRFDADANILGMLNLLEAARA-----SG 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F + +YG D E P P SPY +KA+ + + + YG+ + Sbjct: 108 VKKVIF---SSTGGAIYGEQDVFPAPESHPTRPVSPYGVSKAAGELYLGYYRAQYGLSYV 164 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP P ++ + R++ G +YGDG RD+++ D RA L Sbjct: 165 ALRYANVYGPRQNPHGEAGVVAIFSQRLVAGRECAIYGDGGQTRDFVFGPDVARANLLAF 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +K +G NIG E +I L L + + T + +PG RR ID Sbjct: 225 EKDYVGA-VNIGTGVE-------TDINRLYALLAGAAGADTR-AQHAPGKPGEQRRSCID 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 +S + +GW P + GL +T+ ++ Sbjct: 276 ASLARKVLGWEPSVGLAEGLRRTLEYF 302 >gi|319761204|ref|YP_004125141.1| nad-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC] gi|317115765|gb|ADU98253.1| NAD-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC] Length = 336 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 31/339 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVDI 59 +VTG AGFIG + L+ + +V+ ID L ++ L + F+F Q+D+ Sbjct: 5 LVTGCAGFIGMHCAQRLLERGE-RVVGIDNLNAYYDVGLKHARLDRLRGQGDFTFEQIDV 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + +P +++ AA++ V SI D++ +N++G +L+ C + Sbjct: 64 ADRDAMHALFARVRPHRVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQ------GCRA 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q + + S+ VYG K FSE D +P S Y+ATK +++ + A+ H YGIP Sbjct: 118 QQVE---HLVFASSSSVYGGNAKLPFSERDAVDHPVSYYAATKKANEVMAHAYAHLYGIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 YGP+ P+ + M+ G + +YG G+ VRD+ Y++D V + VL Sbjct: 175 TTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYGQGRLVRDFTYIDDIVEGVLRVLD 234 Query: 239 K------GRIGERYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 K G N G + I F IG L+D + + + T + R + Sbjct: 235 KPATPDAGHDPLAPNPGTSTAPYRI---FNIGNSTPTLLMDYITALEAALGTTAIKRMLP 291 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A D++ + + +G+ P + G+ + V WY Sbjct: 292 IQPGDMHSTAADTAALAAWVGFTPATPVREGVARFVHWY 330 >gi|205372203|ref|ZP_03225018.1| NAD-dependent epimerase/dehydratase [Bacillus coahuilensis m4-4] Length = 335 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 80/338 (23%), Positives = 166/338 (49%), Gaps = 31/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG ++ + L+ + ++V+ +D L Y L L +++Q F+F Q Sbjct: 12 MKVLVTGAAGFIGYSISKRLLQE-GVEVVGVDNLNDYYDVRLKEARLHQLNQQG-FTFYQ 69 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + +R + + + +P +++FA ++ V S+ + +I N++G + ++E Sbjct: 70 ESVENRAAMDTIFHKERPTHVIHFAGQAGVRYSLENPEAYINGNLVGFYQMME------- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYG----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 LS++ Q FL S+ VYG DK ED P+S Y+ATK S++ + ++ Sbjct: 123 -LSKEYSIQ-HFLFASSSSVYGDRQHQKDKPFNEEDRTDTPASLYAATKKSNEMMSYSYS 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + IPV YGP+ P+ +M++G + ++ +G+ RD+ Y++D + + Sbjct: 181 QLFSIPVTGLRFFTVYGPWGRPDMAYYSFAQKMVQGESITVFHNGEMSRDYTYIDDAIES 240 Query: 233 LYLVL---KKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 ++ +L + R+ + YNIG ++ + ++ E+ L+ K++ H + + Sbjct: 241 VWRLLHNPSEERVPYQVYNIGSSSPVRLTSLIEELELGLNK---KAHIH-----YAPFQK 292 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 G D K+ + + P + G+ + W+ + Sbjct: 293 GDVTHTFADVEKLLERVNYKPTTSFRQGMKDFIGWFTE 330 >gi|317153690|ref|YP_004121738.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] gi|316943941|gb|ADU62992.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] Length = 336 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 25/333 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLN-SLKEISQSNLFSFLQVD 58 +++VTG GFIGS L +LV ++ V+ + G L+ S +EI+ + D Sbjct: 7 KILVTGADGFIGSHLVEHLVRQGHSVRAFVLYNSFNSWGWLDESAREITDA--IEIFAGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D +R ++K D +++ AA + S D ++ TN+ GT +++ R Sbjct: 65 IRDPNGVRESMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ +ED P SPYSATK +D + +++ + + IP Sbjct: 117 ---DLGVERVVHTSTSEVYGTARFVPITEDHPLQGQSPYSATKIGADQIAMSFHNAFEIP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT++ G+ G RD+ YV D VR V Sbjct: 174 VSIIRPFNTYGPRQSARAVIPTVITQIASGTRQIKLGALTPTRDFNYVMDTVRGFEAVAA 233 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GE N+G E D I ++ A I R ++ +R +A Sbjct: 234 SDACVGEVVNVGSGFEVSIGDTARAIAEVMGADIEIVCDQQ---RLRPEKSEVERLFA-G 289 Query: 298 SSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 ++K+ GW P+ + + GL T W+ + Sbjct: 290 NAKVLELCGWAPEFGGLDGFKRGLKLTAQWFAE 322 >gi|296268654|ref|YP_003651286.1| UDP-glucose 4-epimerase [Thermobispora bispora DSM 43833] gi|296091441|gb|ADG87393.1| UDP-glucose 4-epimerase [Thermobispora bispora DSM 43833] Length = 319 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 105/341 (30%), Positives = 155/341 (45%), Gaps = 53/341 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG+IGS + LV + V V+D L+ G+ +++ E ++ F++ I Sbjct: 1 MRLLVTGGAGYIGSVVAAQLVEEGH-DVTVLDDLS-TGHADAVPEGAR-----FVRGSIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D L DA+++FAA+S V S+ E+ N+ GT LLE R Sbjct: 54 DA----GGLLAEGFDAVLHFAAKSLVGESVERPGEYWACNLGGTLALLEAMR-------- 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG ++ E P P+SPY A+K + D + A+ YG+ + Sbjct: 102 -AAGVPRIVFSSTAAVYGEPERVPIEETDPTRPASPYGASKLAVDTALTAFAGLYGLAAV 160 Query: 181 LSNCSNNYGPY-HFPEK------LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 N G Y F E+ LIP + + E V L+G DG VRD+L+V Sbjct: 161 SLRYFNVAGAYGRFCERHAVETHLIPNVLKVALGERESVSLFGTDYPTEDGTCVRDYLHV 220 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D RA L L+ G YN+G G + ++ ID+ E+ IP + Sbjct: 221 ADLARAHLLALRACTPGTHRIYNLGNGTGFSVKEVIDVCREV---TGRPIP--------V 269 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 RPG + KIK E+GW P+ GL++ V Sbjct: 270 VVGPRRPGDPAVLVASAEKIKRELGWKPE---RPGLHEIVA 307 >gi|306820754|ref|ZP_07454380.1| GDP-mannose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551203|gb|EFM39168.1| GDP-mannose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 336 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 95/351 (27%), Positives = 168/351 (47%), Gaps = 38/351 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKEISQSNLFSFLQV-DI 59 ++++TG G +GS L YL+++ + + + + N+N L + S F+ D+ Sbjct: 4 KVLITGMTGMVGSHLADYLLDNTDWDIHGMQRWRSPLDNINHLMDRINSKDRVFVHYGDL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + LKE +PD I + AA+S+ S ++ + TNIIGT LLE R+ Sbjct: 64 NDQASLINVLKEVKPDYIFHLAAQSYPLTSFTAPEDTLNTNIIGTTRLLEAVRIL----- 118 Query: 120 QDKKDQFRFLQI-STDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + ++ EV+G + +K +E+ ++P+SPY+ +K +D + + YG Sbjct: 119 ----ELNPIIHVCASSEVFGRVPREKLPINEECSFHPASPYAISKVGTDLVGRYYAEAYG 174 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVR 231 + V+ + + GP F E I + G V G+ ++R W V D VR Sbjct: 175 MTVMTTRMFTHTGPRRGDVFAESTFAKQIALIEAGLIDPVVKTGNLDSLRTWADVRDAVR 234 Query: 232 ALYLVLKKGRI-GERYNIGGN---NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 A Y+++ I GE YNIGG+ + R+ +D + + + D + T+ IR R Sbjct: 235 AYYMLVTVNPIAGEYYNIGGSFSCSVREMLDKLLSLSTVKDIKV-----ETDPIRL---R 286 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 P D++K K+ GW P E NKT+ L+ +WR K++ Sbjct: 287 PIDADLQVPDTTKFKNHTGWQP----EIPFNKTMDDLLN---YWRDRIKKI 330 >gi|147920194|ref|YP_686040.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110621436|emb|CAJ36714.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 309 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 95/326 (29%), Positives = 150/326 (46%), Gaps = 33/326 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG G +GS + L+ +V+++D L+ N I S L ++ DI D Sbjct: 5 RYLVTGGLGQVGSYITESLLTS-GAEVVILDDLSS----NGRDSIPGSRL---VKGDIRD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R ++ +K+ DAIV+ AA+ V RS+ NI GT LL+ R Sbjct: 57 RALVKDLVKDV--DAIVHCAAQIFVARSVEDPSFDADNNIFGTINLLDAAR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + RF+ S+ VYG + E+ P NP SPY +K S + LA+ YG+ Sbjct: 106 NANIRRFVYFSSAAVYGDPLRLPVDEEHPQNPMSPYGVSKLSGEKYALAFQKIYGVHTTA 165 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N Y P P +I I R +G ++GDG RD++ V D V+ + L+L Sbjct: 166 IRPFNIYSPRQDPSNPYSGVISKFIDRASQGQPPIIFGDGTATRDFVSVHDVVQMVMLML 225 Query: 238 -KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYA 295 K+ +G+ +N G + IG L +I Y + +L +RPG + Sbjct: 226 EKEAAVGKVFNCGTGHSTT-------IGQLARTII-SLYGNEKLEPELHAERPGDIKYSY 277 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTV 321 D S+ + +G+ P+ +E+GL + V Sbjct: 278 ADISRARELLGYKPEVVLENGLREIV 303 >gi|145640983|ref|ZP_01796565.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R3021] gi|145274497|gb|EDK14361.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 22.4-21] Length = 91 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 45/75 (60%), Positives = 57/75 (76%) Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 AW TYG+P ++++ SNNYGPY +PEKLIPL I IEG + +YGDG +RDWL+VEDH Sbjct: 3 AWYRTYGLPTIITHSSNNYGPYQYPEKLIPLMILNAIEGKTLPIYGDGLQIRDWLFVEDH 62 Query: 230 VRALYLVLKKGRIGE 244 + ALY VL KG IG+ Sbjct: 63 IDALYNVLMKGNIGK 77 >gi|317492476|ref|ZP_07950904.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919468|gb|EFV40799.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 336 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG+ +C L+++ V+ +D L A L+ + Q++ F FL+ Sbjct: 1 MNILVTGAAGFIGANVCSRLLSNGN-SVVGLDNLNDYYDVALKEARLEPLIQNDDFHFLK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D I +E + D +++ AA++ V S+ + +N++G +LE Sbjct: 60 IDISDSLAIAKLFEEQRFDRVIHLAAQAGVRYSLTNPLSYAQSNLLGHLNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG K FS D +P S Y+ATK S++ + ++ H Y Sbjct: 114 CRHTKVK---HLVYASSSSVYGLNGKTPFSTSDSVDHPISLYAATKKSNELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + ++ G + +Y +G+ RD+ Y++D V + Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTKNILAGEPIDIYNNGEMQRDFTYIDDIVEGIIR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YN+G + K +D + + KS Sbjct: 231 ISDVIPQVNNEWTVETGSPATSSAPYRVYNLGNGSPVKLMDYITS--------LEKSLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ +PG R D+ + + G+ P+ ++ G+ V WY D Sbjct: 283 EAIKNFMPMQPGDVYRTYADTQDLFAATGYKPKVGVDEGVKAFVDWYRD 331 >gi|212212846|ref|YP_002303782.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] gi|215919017|ref|NP_819707.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] gi|206583902|gb|AAO90221.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] gi|212011256|gb|ACJ18637.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] Length = 345 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 52/357 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAGFIGS + L+ D QV VID L G+ +L+ + + +F DIC+ Sbjct: 8 IVTGGAGFIGSHMVDLLL-DCGFQVRVIDNLK-GGHRRNLEHRANNPDLTFEIKDICELS 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + D + +FA + SI +++ TN++GT +LE R Sbjct: 66 APHPLFENV--DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECAR---------AA 114 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + + + ++ YG D ED P P PY+ +K + W YG+PV Sbjct: 115 NVKKLVYAASSSCYGLADVPT-REDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIR 173 Query: 184 CSNNYGP-------------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 N YG F +KL T + GDG RD+LYV D Sbjct: 174 IFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFT---------VVGDGTQRRDFLYVTDVA 224 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA + ++GE +N+G N + +V IG + +I RPG Sbjct: 225 RAFLKAAETRKVGETWNLGAGNPQSINRLVELIG--------------GEVEYIPKRPGE 270 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 D SKIK ++GW P G+++ + W PL+ + N + W Sbjct: 271 PDCTWADISKIKRDLGWEPTITFADGVSRMMSEI--GVWHDAPLWNKESIANATATW 325 >gi|16080139|ref|NP_390965.1| UDP-glucose epimerase [Bacillus subtilis subsp. subtilis str. 168] gi|221311027|ref|ZP_03592874.1| hypothetical protein Bsubs1_16791 [Bacillus subtilis subsp. subtilis str. 168] gi|221315353|ref|ZP_03597158.1| hypothetical protein BsubsN3_16702 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320270|ref|ZP_03601564.1| hypothetical protein BsubsJ_16623 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324553|ref|ZP_03605847.1| hypothetical protein BsubsS_16767 [Bacillus subtilis subsp. subtilis str. SMY] gi|81637614|sp|O34886|YTCB_BACSU RecName: Full=Uncharacterized UDP-glucose epimerase ytcB gi|2293288|gb|AAC00366.1| YtcB [Bacillus subtilis] gi|2635571|emb|CAB15065.1| putative UDP-glucose epimerase [Bacillus subtilis subsp. subtilis str. 168] Length = 316 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 149/330 (45%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D K V+ ID ++ L +LK + F+F++ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 ++ + + S L+ D I + AA V RS G + NI LLE R Sbjct: 61 ENLLTAD-LASLLEGV--DVIFHLAAIPGV-RSSWGNHFHPYAAHNIQALQRLLEACR-- 114 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + F+ ST VYG +G SE+ +P SPY TK + + L + + Sbjct: 115 -------EHSIQTFVFASTSSVYGE-KQGKVSENTSLSPLSPYGVTKLTGEKLCHVYKQS 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +GIP+++ YGP P+ I + ++ + ++GDGQ RD+ Y+ D V+ + Sbjct: 167 FGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGIT 226 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 VL K IGE NIGG + +V +LI + F + G Sbjct: 227 AVLGKPHLIGETVNIGGAERASVLKVV--------SLIEDISGRKATLHFSDKIAGEPSN 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK K + + P +++ GL + + Sbjct: 279 TWADISKAKQLLHYDPATSLKDGLTNEIAY 308 >gi|54309836|ref|YP_130856.1| putative nucleotide sugar epimerase [Photobacterium profundum SS9] gi|46914274|emb|CAG21054.1| putative nucleotide sugar epimerase [Photobacterium profundum SS9] Length = 335 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG+A+C+ L+ D V+ +D Y NL L E+SQ F+FL+ Sbjct: 1 MNFLVTGAAGFIGAAVCKKLILD-GCNVIGLDNKCDYYDVNLKEARLSELSQYGDFTFLK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+C+ + I S E + D +++ A++ V SI + +NIIG +LE R Sbjct: 60 EDLCNNDGINSIFLENKFDRVIHLGAQAGVRYSIENPMAYADSNIIGHLNILEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG +K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 116 ---HHKIEHLVYA--SSSSVYGLNEKTPFETSDSVDHPVSLYAATKKSNELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + ++++G + + +G+ RD+ Y++D V + Sbjct: 171 NIPTTGLRFFTVYGPWGRPDMAPFIFTKKILDGDTIDINNNGEMWRDFTYIDDIVEGVIR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + ++ + EI L K+Y Sbjct: 231 IADVIPTRNDEWKVETGTPASSSAPYAVYNIGHGSPINLMEFISEIENTLGIEAKKNYRG 290 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + G + D+S + IG+ P+ ++ G+ V WY Sbjct: 291 MQ--------AGDVYKTYADTSDLFEAIGYTPKVGVKEGVAAFVKWY 329 >gi|197117251|ref|YP_002137678.1| CDP-paratose 2-epimerase [Geobacter bemidjiensis Bem] gi|197086611|gb|ACH37882.1| CDP-paratose 2-epimerase [Geobacter bemidjiensis Bem] Length = 342 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 149/356 (41%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + +++V D L G++ + K + F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLAAHALKRGD-ELVVFDSLYRQGSVANRKWLETQGHFHFIHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + ++EFQPDAI + A + + SI N++GT LLE RL+ S Sbjct: 60 NQNDVTRLIQEFQPDAIFHLAGQVAMTTSIANPRMDFEVNVVGTHNLLEAVRLFAPEAS- 118 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------------GLFSEDMPYNPSSPYSATKASS 164 ST++VYG L++ F E P SPY +K + Sbjct: 119 -------VFYSSTNKVYGDLEQYSYAETETRFVCSDRPNGFDESTPLEFHSPYGCSKGGA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK--------LIPLAITRMIEGSHVF-LYG 215 D +L + +G+ + S+ YG F A TR+ F + G Sbjct: 172 DQYMLDYARIFGLKTTVFRHSSMYGGRQFATYDQGWIGWFCQKAAETRLGLLKEPFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRI--GERYNIGGNNERKNIDIVF------EIGFLL 267 G+ VRD L+ +D + + L++ + G+ +NIGG E + IG L Sbjct: 232 TGKQVRDVLHADDMITLYFGALERAELLRGQVFNIGGGIENSLSLLELFELLQGHIGGAL 291 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D L + R R + D K + IGW P+ + G+ + + W Sbjct: 292 DYLK------------LAPRESDQRVFVADIGKAAALIGWQPRVSASEGVARMLEW 335 >gi|161831324|ref|YP_001596599.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] gi|14600133|gb|AAK71256.1|AF387640_2 dehydratase-like protein [Coxiella burnetii] gi|161763191|gb|ABX78833.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] Length = 344 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 52/357 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAGFIGS + L+ D QV VID L G+ +L+ + + +F DIC+ Sbjct: 7 IVTGGAGFIGSHMVDLLL-DCGFQVRVIDNLK-GGHRRNLEHRANNPDLTFEIKDICELS 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + D + +FA + SI +++ TN++GT +LE R Sbjct: 65 APHPLFENV--DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECAR---------AA 113 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + + + ++ YG D ED P P PY+ +K + W YG+PV Sbjct: 114 NVKKLVYAASSSCYGLADVPT-REDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIR 172 Query: 184 CSNNYGP-------------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 N YG F +KL T + GDG RD+LYV D Sbjct: 173 IFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFT---------VVGDGTQRRDFLYVTDVA 223 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA + ++GE +N+G N + +V IG + +I RPG Sbjct: 224 RAFLKAAETRKVGETWNLGAGNPQSINRLVELIG--------------GEVEYIPKRPGE 269 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 D SKIK ++GW P G+++ + W PL+ + N + W Sbjct: 270 PDCTWADISKIKRDLGWEPTITFADGVSRMMSEI--GVWHDAPLWNKESIANATATW 324 >gi|153007955|ref|YP_001369170.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] gi|151559843|gb|ABS13341.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] Length = 325 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 100/347 (28%), Positives = 159/347 (45%), Gaps = 44/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M+ IVTG AGFIG + L+ D QV+ ID N+N +LKE S L Sbjct: 1 MKAIVTGAAGFIGFHTAQRLL-DEGWQVIGID------NVNDYYPVALKETRLSKLHMRE 53 Query: 52 -FSFLQVDICDRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F F + DI D E +A+ + D IV+ AA++ V SI +I+ N+ G + E Sbjct: 54 GFRFAKADISDAEAFNAAIGADRDADIIVHLAAQAGVRYSIENPTVYISANVQGQVTVFE 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLV 168 + L DK+ + S+ VYG+ +K FSE P + P S Y+ATK S + L Sbjct: 114 ------TALRLDKRPPVVYA--SSSSVYGANEKVPFSESDPVDHPVSIYAATKRSGELLA 165 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H + + YGPY P+ L + +++G + ++ +G+ RD+ +V+D Sbjct: 166 YSYRHVHKLHSAGLRFFTVYGPYGRPDMAPWLFTSAILKGEPIRVFNNGEMQRDFTFVDD 225 Query: 229 HVR-----ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V A ++ K YN+G N D + I + + E IR Sbjct: 226 IVSGVVGAARRILDKPEDTAPVYNLGNNRPVMLNDFIAAI---------EKATGKEAIRK 276 Query: 284 IEDRPGHD--RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +E P D R YA D + ++G+ P+ ++ G+ V W+ N Sbjct: 277 LEPMPAADVPRTYA-DITLAAGDLGFSPKTTLDQGIPLFVEWFRGYN 322 >gi|256819544|ref|YP_003140823.1| NAD-dependent epimerase/dehydratase [Capnocytophaga ochracea DSM 7271] gi|256581127|gb|ACU92262.1| NAD-dependent epimerase/dehydratase [Capnocytophaga ochracea DSM 7271] Length = 339 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GF+GS L + ++ + +++V+D L G+ +L + F++ DI Sbjct: 1 MKYLITGGCGFVGSNLAQEVLKRGE-ELVVLDNLFRYGSAQNLDWLRTQGSFTYYPYDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +K+ QPD + + A + + SI N +GTF LL+ R + S Sbjct: 60 NTNDVETVIKKEQPDIVFHLAGQVAMTTSIENPRLDFEVNAMGTFNLLDAIRKYCPNAS- 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED----------------MPYNPSSPYSATKASS 164 L ST++VYG F E+ P + SPY +K ++ Sbjct: 119 -------ILYSSTNKVYGDFANLTFKEEKMRYTCQEYPNGFPETYPLDFHSPYGCSKGTA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIE-----GSHVF-LYG 215 D +L + YG+ L+ S+ YG + F + I + + IE +F + G Sbjct: 172 DQYLLDFHRIYGLKTLVFRHSSMYGSHQHATFDQGWIGWFVQKAIEIKQNTNQGLFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +G+ VRD LY ED V + +K + G+ +NIGG E N + E+ +L+ L+ Sbjct: 232 NGKQVRDVLYAEDVVNLYFQGVKYLEQAKGQTFNIGGGIE--NSLSLLELFAMLEKLLGI 289 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + EL R + D++K + + W P+ E G+ K V W Sbjct: 290 KMQYKEL----PFRESDQLVFVADNTKAQKILQWQPKMTSEQGIEKMVEW 335 >gi|156937783|ref|YP_001435579.1| NAD-dependent epimerase/dehydratase [Ignicoccus hospitalis KIN4/I] gi|156566767|gb|ABU82172.1| NAD-dependent epimerase/dehydratase [Ignicoccus hospitalis KIN4/I] Length = 293 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 41/319 (12%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGG+G+IGS L L+ + +++VL A + ++ N+ + + R+C Sbjct: 4 ITGGSGYIGSKLVEELLKEGEVKVL-----DLAPPPVPHVKFTRVNVLLLDDLKVELRDC 58 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + + + AAE + S+ + + N+ GT +LE RL D Sbjct: 59 ----------ELVYHLAAEIKAEESLREPAKVVRVNVEGTLNVLEAARL------ADASV 102 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 F ST VYG E+ P P + Y ATK + + LV ++ +G+ Sbjct: 103 VF----ASTAAVYGEAKVVPVPEEHPLEPVNVYGATKVAGEALVNSYRKAFGLRAWTLRL 158 Query: 185 SNNYGPYHFPEK-LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV--LKKGR 241 N YGP P + ++ + R ++G + +YGDG+ VRD+++V+D V+A LV + +G Sbjct: 159 FNVYGPSASPSRGVVGEFLRRALKGEPLRIYGDGRQVRDFVFVDDVVKAFKLVREIPEG- 217 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 YN+G + + I+ L +I + S +E++ F+ +RPG R D +K+ Sbjct: 218 ---TYNVGSG---RGVSII----TLAKKIIELTGSKSEMV-FLPERPGDVRVSVADVTKL 266 Query: 302 KSEIGWFPQENMESGLNKT 320 + GW P+ ++E GL T Sbjct: 267 AA-FGWRPRVSLEEGLRLT 284 >gi|330823071|ref|YP_004386374.1| UDP-glucuronate 5'-epimerase [Alicycliphilus denitrificans K601] gi|329308443|gb|AEB82858.1| UDP-glucuronate 5'-epimerase [Alicycliphilus denitrificans K601] Length = 336 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 31/339 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQSNLFSFLQVDI 59 +VTG AGFIG + L+ + +V+ ID L ++ L + F+F Q+D+ Sbjct: 5 LVTGCAGFIGMHCAQRLLERGE-RVVGIDNLNAYYDVGLKHARLGRLHGQGDFTFEQIDV 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + + +P +++ AA++ V SI D++ +N++G +L+ C + Sbjct: 64 ADRDAMHALFARVRPHRVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQ------GCRA 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q + + S+ VYG K FSE D +P S Y+ATK +++ + A+ H YGIP Sbjct: 118 QQVE---HLVFASSSSVYGGNAKLPFSERDAVDHPVSYYAATKKANEVMAHAYAHLYGIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 YGP+ P+ + M+ G + +YG G+ VRD+ Y++D V + VL Sbjct: 175 TTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYGQGRLVRDFTYIDDIVEGVLRVLD 234 Query: 239 K------GRIGERYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 K G N G + I F IG L+D + + + T + R + Sbjct: 235 KPATPDAGHDPLAPNPGTSTAPYRI---FNIGNSTPTLLMDYITALEAALGTTAIKRMLP 291 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A D++ + + +G+ P + G+ + V WY Sbjct: 292 IQPGDMHSTAADTAALAAWVGFTPATPVREGVARFVHWY 330 >gi|87201163|ref|YP_498420.1| NAD-dependent epimerase/dehydratase [Novosphingobium aromaticivorans DSM 12444] gi|87136844|gb|ABD27586.1| NAD-dependent epimerase/dehydratase [Novosphingobium aromaticivorans DSM 12444] Length = 332 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 38/346 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNS--LKEISQ--SNLFSF 54 M+++VTG AGFIG +L L+ D I V +++ Y L L ++Q F+F Sbjct: 1 MKVLVTGAAGFIGYSLATRLLARGDEVIGVDIVNDY-YDPRLKEARLARLAQQGGGRFTF 59 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 L+ D D + +AL+ D IV+ A++ V SI ++ +N++G LLE R Sbjct: 60 LRTDFADYPALTAALEGAHFDRIVHLGAQAGVRYSIENPHAYVQSNLVGHVNLLEVAR-- 117 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 + + S+ VYG K FS +D +P S Y+ATK + + + + H Sbjct: 118 -------HRGVEHMVYASSSSVYGGNTKLPFSVDDRVDHPLSLYAATKKADELMSETYAH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P+ YGP+ P+ ++ L ++ G + ++ G RD+ YV+D V + Sbjct: 171 LYRLPLTGLRFFTVYGPWGRPDMMMWLFTRAILAGEPIQVFNHGDMYRDFTYVDDIVSGV 230 Query: 234 YLVL----------KKG---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 L K G + YNIG + + ++ A++ Sbjct: 231 VACLDNPPLDDGAPKAGGSLKPHRLYNIGNHKSEHLMKVI--------AILEAELGRKAE 282 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +R + +PG R+ D I ++G+ P +E+G+ V WY D Sbjct: 283 MRMLPMQPGDVRQSFADIDAISGDLGYRPTTGIETGVPNFVRWYKD 328 >gi|163792518|ref|ZP_02186495.1| nucleotide sugar epimerase [alpha proteobacterium BAL199] gi|159182223|gb|EDP66732.1| nucleotide sugar epimerase [alpha proteobacterium BAL199] Length = 328 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 30/338 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG + + L+ D +VL ID L A L L EI N FSF + Sbjct: 1 MTVLVTGAAGFIGMHVAKALL-DRGERVLGIDNLNAYYDPALKLARLAEIEGRNGFSFDR 59 Query: 57 VDICDRECIRSALKEFQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D DR+ + +A PD IV+ A++ V SI +++ N++G +++E R Sbjct: 60 LDFADRDAM-AAFDAAHPDIDRIVHLGAQAGVRYSIEQPFDYLQANLMGHLVMMEMAR-- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 + +S+ K F+ S+ VYG+ + FS +D P S Y ATK +++ + ++ Sbjct: 117 -ARVSRGLK---HFVYASSSSVYGANREIPFSVDDRVDRPMSFYGATKRANEAMSYSYAS 172 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YGIP YGP+ P+ L R++ G + ++ GQ RD+ Y++D V + Sbjct: 173 LYGIPTTGLRFFTVYGPWGRPDMSPWLFTDRILNGRPIEVFNHGQMRRDFTYIDDIVAGV 232 Query: 234 YLVLKKGRIGE-------RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 L G YN+G N+ +D + +++A K ELI Sbjct: 233 VAALDHPPAGSAESPPIATYNLGNNSPVALLDYI----KVIEAACGKP---AELI-MKPM 284 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D + ++G+ P +E G+ + V W+ Sbjct: 285 QPGDVLETYADIEASRRDLGYQPTTLIEVGIPRFVDWF 322 >gi|294085508|ref|YP_003552268.1| putative nucleotide sugar epimerase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665083|gb|ADE40184.1| putative nucleotide sugar epimerase [Candidatus Puniceispirillum marinum IMCC1322] Length = 340 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/350 (26%), Positives = 155/350 (44%), Gaps = 45/350 (12%) Query: 1 MRLIVTGGAGFIG--SALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSF 54 ++++VTG AGFIG S+L D QV+ +D L Y +L L ++ FSF Sbjct: 2 VKILVTGAAGFIGMHSSLRLLARGD---QVIGVDNLNDYYDVSLKQARLARLTSHKNFSF 58 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 Q+ + D++ + S +PD +++ AA++ V S+ +I N+ G +LE R Sbjct: 59 HQISVEDKDAMESLFATQKPDRVIHLAAQAGVRYSLTNPHAYIDANLQGFINILEGCR-- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGH 173 D S+ VYG FSE + P S Y+ATK +++ + + H Sbjct: 117 -------HNDVVHLAYASSSSVYGGNVAMPFSEHHNIDHPVSLYAATKKANELMAHTYSH 169 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + L M+EG + ++ +G+ VRD+ Y++D V + Sbjct: 170 LYDLPTTGLRFFTVYGPWGRPDMALFLFTKAMMEGREIDVFNNGEMVRDFTYIDDIVEGV 229 Query: 234 YLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VL K +NIG N +D IG L AL ++ Sbjct: 230 IRVLDKTATANPDYDAHNPDPATAAAPYRVFNIGNGNPTPLMDY---IGALESALGIEAK 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG + D++++ +G+ P + G+ V WYL Sbjct: 287 KN-----FMPMQPGDVPATSADTTELGKWVGFQPDTAVRDGVQYFVEWYL 331 >gi|183985101|ref|YP_001853392.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium marinum M] gi|183178427|gb|ACC43537.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium marinum M] Length = 314 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTG AGFIGS L L+ D V+ +D G +L+ + + F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-TGRATNLEHLVDNLAHVFVEADIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++ ++ +P+ I + AA+ V S+ + N+IGT L E RL Sbjct: 59 DAD-LQAIFEQHRPEVIFHLAAQIDVRHSVADPQFDASVNVIGTLRLAEAARLTGV---- 113 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YG+ + SE +P +P+SPY+A K + + + + H YG+ Sbjct: 114 -----RKVVHTSSGGSIYGTPPQYPTSERVPTDPASPYAAGKVAGEIYLNTFRHLYGLEC 168 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A Sbjct: 169 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGTNTRDYVFVDDVVDAFVRA 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+NIG E + L + + + + F R G +R + Sbjct: 229 GSDVGGGQRFNIGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRSCL 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +GW PQ + G+ +TV ++ Sbjct: 281 DISRAEEVLGWRPQVELADGVRRTVDYF 308 >gi|284997372|ref|YP_003419139.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] gi|284445267|gb|ADB86769.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] Length = 304 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 44/334 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++ GGAGF+GS +LV L+ + V+D L+ L + I Sbjct: 1 MKYLIFGGAGFLGS----HLVESLEGDITVVDDLSTVKYLELPPNVKL----------IK 46 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++F D +++ AA + + E +N +GT+ LE R Sbjct: 47 DRVETFKTNEKF--DFVIHLAARPSPEDYMQHPVETALSNSLGTYNALEIAR-------- 96 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K FL S+ E+YG + ED P S Y +K S+ L++++ Y Sbjct: 97 --KSDAIFLYSSSSEIYGHAEIIPTPEDYWGKVNPIGVRSCYDESKRFSESLIMSYFREY 154 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V + N YGP + +++ I + ++G + ++GDG R +LYV D + Sbjct: 155 GLDVRIQRPFNVYGPRLREDGSYGRVVSRFIYQALKGEDITIFGDGNQTRAFLYVSDWIE 214 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A ++ +G GE +N+G + E K ID L +I + + I+F+ R Sbjct: 215 ATKKMLFTQGLKGEVFNVGSDKEVKIID--------LAKMIIRLTNSNSKIKFLPPRADD 266 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A D +K K +GW P+ ++E GL +T+ W+ Sbjct: 267 PPRRAADITKAKKILGWEPKVDLEEGLKRTIEWF 300 >gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 305 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 34/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V ++D L +GN+ ++ ++ F Q+DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-ERGYDVCIVDNLL-SGNVCNINPKAK-----FYQLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + +E + + ++ AA+ V +S+ A + N++GT LL+ C Sbjct: 53 -RDNLEKVFEENKIEYCIHQAAQVSVAKSMEDAYLDCSINVLGTVNLLD------YCAKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG + E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYI 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM +V ++GDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEANCVAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KN+ + +FEI L L Y + + + RPG Sbjct: 223 ETSVSG-TFNL---STGKNVSVNELFEI---LSGL--TGYKKSPVYQ--PKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +KS +G+ PQ ++ GL KTV +++D Sbjct: 272 LSNNLLKSVLGFSPQFSLLEGLKKTVEYFID 302 >gi|209363864|ref|YP_001424090.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] gi|212219092|ref|YP_002305879.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] gi|207081797|gb|ABS78009.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] gi|212013354|gb|ACJ20734.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] Length = 345 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 52/357 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAGFIGS + L+ D QV VID L G+ +L+ + + +F DIC+ Sbjct: 8 IVTGGAGFIGSHMVDLLL-DCGFQVRVIDNLK-GGHRRNLEHRANNPDLTFEIKDICELS 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + D + +FA + SI +++ TN++GT +LE R Sbjct: 66 APHPLFENV--DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECAR---------AA 114 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + + + ++ YG D ED P P PY+ +K + W YG+PV Sbjct: 115 NVKKLVYAASSSCYGLADVPT-REDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIR 173 Query: 184 CSNNYGP-------------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 N YG F +KL T + GDG RD+LYV D Sbjct: 174 IFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFT---------VVGDGTQRRDFLYVTDVA 224 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA + ++GE +N+G N + +V IG + +I RPG Sbjct: 225 RAFLKAAETRKVGETWNLGAGNPQSINRLVELIG--------------GEVEYIPKRPGE 270 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 D SKIK ++GW P G+++ + W PL+ + N + W Sbjct: 271 PDCTWADISKIKRDLGWEPTITFADGVSRMMSEI--GVWHDAPLWDKESIANATATW 325 >gi|118619383|ref|YP_907715.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium ulcerans Agy99] gi|118571493|gb|ABL06244.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium ulcerans Agy99] Length = 314 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTG AGFIGS L L+ D V+ +D G +L+ + + F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-TGRATNLEHLVDNLAHVFVEADIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++ ++ +P+ I + AA+ V S+ + N+IGT L E RL Sbjct: 59 DAD-LQAIFEQHRPEVIFHLAAQIDVRHSVADPQFDASVNVIGTLRLAEAARLTGV---- 113 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YG+ + SE +P +P+SPY+A K + + + + H YG+ Sbjct: 114 -----RKVVHTSSGGSIYGTPPQYPTSERVPTDPASPYAAGKVAGEIYLNTFRHLYGLEC 168 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A Sbjct: 169 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGTNTRDYVFVDDVVDAFVKA 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+NIG E + L + + + + F R G +R + Sbjct: 229 GSDVGGGQRFNIGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRSCL 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +GW PQ + G+ +TV ++ Sbjct: 281 DISRAEEVLGWRPQVELADGVRRTVDYF 308 >gi|153207365|ref|ZP_01946102.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165918450|ref|ZP_02218536.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] gi|120576674|gb|EAX33298.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165917818|gb|EDR36422.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] Length = 344 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 145/357 (40%), Gaps = 52/357 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAGFIGS + L+ D QV VID L G+ +L+ + + +F DIC+ Sbjct: 7 IVTGGAGFIGSHMVDLLL-DCGFQVRVIDNLK-GGHRRNLEHRANNPDLTFEIKDICELS 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + D + +FA + SI +++ TN++GT +LE R Sbjct: 65 APHPLFENV--DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECAR---------AA 113 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + + + ++ YG D ED P P PY+ +K + W YG+PV Sbjct: 114 NVKKLVYAASSSCYGLADVPT-REDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIR 172 Query: 184 CSNNYGP-------------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 N YG F +KL T + GDG RD+LYV D Sbjct: 173 IFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFT---------VVGDGTQRRDFLYVTDVA 223 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA + ++GE +N+G N + +V IG + +I RPG Sbjct: 224 RAFLKAAETRKVGETWNLGAGNPQSINRLVELIG--------------GEVEYIPKRPGE 269 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKW 347 D SKIK ++GW P G+++ + W PL+ + N + W Sbjct: 270 PDCTWADISKIKRDLGWEPTITFADGVSRMMSEI--GVWHDAPLWDKESIANATATW 324 >gi|33861813|ref|NP_893374.1| dTDP-glucose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640181|emb|CAE19716.1| possible dTDP-glucose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 329 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 15/267 (5%) Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + S + +P+ I++F + V S L + + TTNI ++RL + + Sbjct: 63 DVEEMISHINRLKPNFIIDFMGQGMVAPSWLKPEVWYTTNI------AIKSRLMNALI-- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D ++++I T EV+GS ++ ED +NPS+PY+ + A+ D+ + Y P L Sbjct: 115 DSSFLQKYIRIGTPEVFGS-NENFLKEDECFNPSTPYAVSHAAIDFNLRCLYKQYNFPYL 173 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N YG ++IP + L G G++ R +++ +D V A+ ++K Sbjct: 174 IGRFANFYGVGQQLYRIIPRLFLSCRSERNFILDGKGESRRSFIFSKDIVSAIDSMIKFD 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 IG+ +N N E + +V +I L + + +++F +RPG DR Y +D K Sbjct: 234 GIGQEFNFSSNEEISIMSLVNKICNLTNV------DKSRILKFGPERPGKDRYYRLDIKK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ +++ GLN W +N Sbjct: 288 SKNVLNWEPEVSLDEGLNIINIWISEN 314 >gi|148256900|ref|YP_001241485.1| nucleotide sugar epimerase [Bradyrhizobium sp. BTAi1] gi|146409073|gb|ABQ37579.1| nucleotide sugar epimerase [Bradyrhizobium sp. BTAi1] Length = 338 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 156/345 (45%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG L + L+ + + QV+ ID + Y L L ++ F F ++D Sbjct: 6 ILVTGAAGFIGFHLAQRLLAEGR-QVIGIDNINAYYDPKLKQARLDRLAAQPGFIFHKLD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR +++ A+V+ AA++ V S+ ++ N+ G +LE R C Sbjct: 65 LVDRAGVKALFAAHHFPAVVHLAAQAGVRYSLDNPHAYVDANLEGFINILEGCR-HHGCA 123 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L S+ VYG+ K FS +D +P S Y+A+K +++ + ++ H Y + Sbjct: 124 --------HLLFASSSSVYGANTKLPFSVKDNVDHPISLYAASKKANELMAHSYSHLYRL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + + ++ G V L+ GQ RD+ Y++D V+A++ ++ Sbjct: 176 PATGLRFFTVYGPWGRPDMAMFIFAKAILAGQPVRLFNHGQMRRDFTYIDDIVQAIHRLI 235 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + G YNIG N+ + +D++ L+ K + Sbjct: 236 GRPPQGNPDWDGTRPDPSSSRAPWRIYNIGNNHPEQLMDVI--------TLLEKEFGRPA 287 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S ++ +IG+ P + G+ + WY Sbjct: 288 IKEMLPMQPGDVEATYADVSDLERDIGFRPATPIADGIARFARWY 332 >gi|261323210|ref|ZP_05962407.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33] gi|261299190|gb|EEY02687.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33] Length = 337 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ ++ +D + G + +++ + + FSF++ DI + Sbjct: 20 VLVAGGAGFLGSHLCERLLNEGH-SLICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 77 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N A + + TN+IG+ LLE + + Sbjct: 78 LDLRV-------DEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 125 ----RIFQASTSEVYGDPHVHPQPENYWGNVNSFGPRSCYDEGKRSAEMLFHDFHQQYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 181 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 241 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 289 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 290 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 322 >gi|313681044|ref|YP_004058783.1| nad-dependent epimerase/dehydratase [Oceanithermus profundus DSM 14977] gi|313153759|gb|ADR37610.1| NAD-dependent epimerase/dehydratase [Oceanithermus profundus DSM 14977] Length = 313 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 163/340 (47%), Gaps = 38/340 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L + +V V+D + +G +L E + +VD+ Sbjct: 1 MKVMVTGGAGFIGSHIVDAL-REKGAEVAVLDDFS-SGRRENLPEGVR-----VYEVDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +++A +F P + + AA+ V S+ + N++G +LE R Sbjct: 54 DLPGVQAAFADFAPTHVSHQAAQISVAASVKDPLFDASVNVLGGLNVLEAAR-------- 105 Query: 121 DKKDQFRFLQIST--DEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + ++ +YG + +G + E P P+SPY+A KA+ ++ + + +G+ Sbjct: 106 --RVGVRHVVFASTGGAIYGEVPEGKRADESWPARPASPYAAAKAAFEHYLEVYRAQFGL 163 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDH 229 N YGP P ++ + R++ G V +Y GD VRD++YV D Sbjct: 164 RYAALRYGNVYGPRQDPHGEAGVVAIFARRLLAGEPVRVYARREKGDDGGVRDYVYVGDV 223 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A L L++G G YN+ R +++ + L+A + + E RPG Sbjct: 224 VAANLLALEQGLEGV-YNVAAGAGRSTREVLSAVARALEA--------EPEVEWAEVRPG 274 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 R ++ +++++ +GW P + G+ +TV W+ +N++ Sbjct: 275 DLERSVLEPARLRA-LGWEPATPFDQGIRRTVEWFKENDF 313 >gi|330813096|ref|YP_004357335.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. IMCC9063] gi|327486191|gb|AEA80596.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. IMCC9063] Length = 330 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 120/251 (47%), Gaps = 17/251 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG GFIGS L L+N K++ LV+ + AG L+ LK + NL + D Sbjct: 1 MNILVTGSEGFIGSHLVEKLLNVGHKVKALVLYNSFNSAGWLDHLK--NNKNL-KIIFGD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + K D + + AA + S + + F+ TNI GT +L +R Sbjct: 58 IRDENFLLENFKNI--DCVFHLAALISIPHSYVSFNSFLDTNIKGTTNILNASR------ 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + ST EVYGS E P +P SPY+ATK S+D + +++ ++ +P Sbjct: 110 ---KHKVKKIFVTSTSEVYGSAQYVPIDETHPLSPQSPYAATKVSADSIAISFFKSFDLP 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 V + N YGP +IP I +++ G+ ++ RD+ YV+D V L Sbjct: 167 VTVLRPFNAYGPRQSARAIIPSIIAQVLNSKKFIKVGNIKSFRDFTYVDDTVNGFICALT 226 Query: 238 KKGRIGERYNI 248 K +GE NI Sbjct: 227 AKNILGETINI 237 >gi|23099537|ref|NP_693003.1| UDP-glucose 4-epimerase [Oceanobacillus iheyensis HTE831] gi|22777767|dbj|BAC14038.1| UDP-glucose 4-epimerase (Vi polysaccharide biosynthesis) [Oceanobacillus iheyensis HTE831] Length = 309 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 149/328 (45%), Gaps = 28/328 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGF+GS + R L+++ + V ++D + GN N++ +I+ + D + Sbjct: 3 KYLVTGGAGFVGSNIVRKLISNGE-SVRLLDNFS-TGNKNNIADINDQ--VEIISGDFTN 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ A+K D I++ A V +SI N+ GT LL Sbjct: 59 KAVVKEAMKGV--DIILHQGAIPSVPKSIDNPILSNYANVNGTLTLLNAAV--------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ RF+ ++ YG+ + EDM NP SPY+ +K + + + YG+ + Sbjct: 108 EEGVSRFVYAASSSAYGNNKRLPKQEDMIANPMSPYAVSKYTGELYCKVFYEIYGLETIS 167 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 N +GP P +IP I +I+ +YGDG RD+ Y+++ V A L Sbjct: 168 LRYFNVFGPRQNPHSKYAAVIPAFIESIIQNQSPIIYGDGTQSRDFTYIDNVVSANLLAA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K GE NIG + + D+V I +L I S HT +DR G + Sbjct: 228 TAKNLKGEVVNIGTGTQIQLNDLVDRINNILGKNI--SAIHT------KDRAGDVKHSLA 279 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K I + P + GL KTV W+ Sbjct: 280 DIQRAKDIINYEPITTFDDGLIKTVEWF 307 >gi|312127797|ref|YP_003992671.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] gi|311777816|gb|ADQ07302.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] Length = 305 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 34/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V ++D L +GN+ ++ ++ F Q+DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-EKGYDVCIVDNLL-SGNVCNINPKAK-----FYQLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + +E + + ++ AA+ V +S+ A + N++GT LL+ C+ Sbjct: 53 -RDNLEKVFEENKIEYCIHQAAQVSVAKSMKDAYLDCSINVLGTVNLLD------YCVKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFILASSAAVYGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYI 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM V ++GDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVVSIFCERMQGSKDVIIFGDGTQTRDFIYVEDVAEANCIAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KN+ + +FEI L L Y + + + RPG Sbjct: 223 ESSVSG-TFNL---STGKNVSVNELFEI---LSGL--TGYKRSPVYQ--SKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +KS +G+ PQ ++ GL KTV +++D Sbjct: 272 LSNNLLKSVLGFSPQFSLLEGLKKTVEYFID 302 >gi|126660154|ref|ZP_01731273.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] gi|126618597|gb|EAZ89347.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] Length = 334 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 50/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+V D L+Y G+ +K++ ++ L + D DR Sbjct: 8 ILVTGGAGYIGSHAVLSL-QKAGYNVIVFDNLSY-GHPEIIKDVLKTEL---IVGDTNDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+++FAA V S+ + N++GT LLE + ++ + Sbjct: 63 PLLDELFSTRNIAAVMHFAAFIAVGESVKDPGIYYQNNVVGTLTLLE------AMMAANI 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K +F+ ST +YG + +E P NP SPY+++K + ++ + YG+ ++ Sbjct: 117 K---KFVFSSTCAIYGMPQEIPMTESHPNNPLSPYASSKYMVEKILKDFDKAYGLKSVIF 173 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S N G H PE LIPLA +T + + H+F++G DG +RD+++V Sbjct: 174 RYFNASGADPSGNLGEDHTPETHLIPLALLTALKKRDHLFIFGTDYDTPDGTAIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--- 279 D HV L +L G E +N+G N GF + +I S TE Sbjct: 234 NDLASAHVLGLEYLLDGGE-SEMFNLGNGN-----------GFSVRQVIEMSKKVTEIDF 281 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWY 324 L++ + R G S K KS +GW PQ +E+ +N W+ Sbjct: 282 LVKESDRRSGDVPMLVGSSKKAKSILGWKPQYFELETIVNHAWQWH 327 >gi|226313847|ref|YP_002773741.1| nucleotide sugar epimerase [Brevibacillus brevis NBRC 100599] gi|226096795|dbj|BAH45237.1| probable nucleotide sugar epimerase [Brevibacillus brevis NBRC 100599] Length = 327 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 28/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL---NSLKEISQSNLFSFLQV 57 M ++VTG AGFIG + R L+ + V + Y + N L+ + LF F++ Sbjct: 1 MSILVTGAAGFIGFHVARRLLEQGQTVWGVDNCNEYYDPVLKSNRLEILQAYPLFRFVKA 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D+ + +E +P+ +++ AA++ V S+ + T+NI G +LE R Sbjct: 61 DIADQSKMDELFREMEPETVIHLAAQAGVRYSLENPHAYTTSNITGFLNILEGCR----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K F+E P + P S Y+ATK +++ + + H YG Sbjct: 116 ----RSRVKHLLYASSSSVYGGNTKLPFAEYDPVDEPVSLYAATKKANELMAYTYSHLYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + ++ G V ++ G RD+ YV+D V + + Sbjct: 172 LPATGLRFFTVYGPWGRPDMALYTFTKAILSGEPVRIFNYGNMTRDFTYVDDIVEGMLRL 231 Query: 237 LKK--GRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + + R G++ +NIG + + ID++ + L + L K+ + ++ +PG Sbjct: 232 MNRIPQREGDKAPHEVFNIGNH---QPIDLLTFLSILEEKLGKKA-----VRDYLPIQPG 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + G+ P+ ++ G+++ V WY+ Sbjct: 284 DVPATYASVEALYEATGFRPKTPVDVGISRFVDWYV 319 >gi|295399444|ref|ZP_06809426.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|294978910|gb|EFG54506.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] Length = 313 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 26/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+++VTGGAGFIGS L L++ L V VID Y + ++ NL + Sbjct: 1 MKILVTGGAGFIGSHLVAKLLS-LGHDVAVIDNFHPYYPAERKKRQFRALTGGNLPVY-H 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D E +QPD + + AA V S+L +++ +I T +L+ + Sbjct: 59 IDLLDGEKTEELFCRYQPDCVYHLAALPGVPNSLLQPLDYVDYDIKATINVLKAAGM--- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 L S+ VYG+ E+M SPY+A K ++ A+ H + Sbjct: 116 ------AGVRHVLFASSSSVYGNQGNVPLKEEMAAGQVVSPYAAAKYGAESFCYAYAHLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G V + YGP+ P+ I I ++ G + +YG G RD+ +V+D V + Sbjct: 170 GYQVTIFRYFTVYGPWGRPDMAISKFIRHLLRGEEIVVYGTG-TARDYTFVDDVVSGMVA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L +G + +N+G ++ E+ K++ T ++ +R G + Sbjct: 229 ALGRGGGNDVFNLGSGRSIAMERLLQEL---------KAHFPTMKVKHAPERKGDVKATW 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P E GL +T+ W Sbjct: 280 ADITKAQRAFGYKPSITFEVGLARTIAW 307 >gi|242372319|ref|ZP_04817893.1| UDP-glucuronate 5'-epimerase [Staphylococcus epidermidis M23864:W1] gi|242350048|gb|EES41649.1| UDP-glucuronate 5'-epimerase [Staphylococcus epidermidis M23864:W1] Length = 333 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIGS L + L+N +V+ ID + Y+ L + LK I N F+F + Sbjct: 1 MKVLITGVAGFIGSHLSKKLINQ-GYEVVGIDNINDYYSVQLKEDRLKSIGNEN-FTFYK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D E I + +P+ +VN AA++ V SI +I +N++G +LE R Sbjct: 59 TDLEDNETIDQIFDKEKPEVVVNLAAQAGVRYSIDNPRAYIDSNVVGFLNILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ +K + D +P S Y+ATK S++ + + Y Sbjct: 115 -----HHKVGNLIYASSSSVYGANTNKPFKTSDNIDHPLSLYAATKKSNELMAHTYSDLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G +RD+ YV+D V A+ Sbjct: 170 DLPTTGLRFFTVYGPWGRPDMALFKFTKAVVNDESIDVYNHGNMMRDFTYVDDIVEAISR 229 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ K YNIG N+ + ++ V I + Sbjct: 230 LINKPAQPNPNWSGSNPDPSSSYAPYKIYNIGNNSPVRLMEFV--------EAIENKLNK 281 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ +PG + + +I + PQ +++ G+NK + WYL+ Sbjct: 282 KAKKNYLDLQPGDVPETYANVDDLYRDINFKPQTSIQDGVNKFIDWYLE 330 >gi|315928000|gb|EFV07321.1| NAD dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 272 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 25/259 (9%) Query: 75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTD 134 DAI + A + S ++ TN+ GT +LE + K + F+ ST Sbjct: 22 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAK---------KNEISHFIHTSTS 72 Query: 135 EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP 194 EVYG+ E P P SPYSA+K ++D + L++ +++ + V ++ N YGP Sbjct: 73 EVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQSA 132 Query: 195 EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNER 254 +IP IT+++ G+ GD RD +V D +L GE YNIG E Sbjct: 133 RAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGEVYNIGSGVEY 192 Query: 255 KNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR--RYAIDSSKIKSEIGWF 308 +++ I +LD+ ++ I+D RP + R D++K+K W Sbjct: 193 SMQEVLDLIQKILDS----------KVKIIQDEQRLRPKNSEVFRLCCDANKLKKATNWQ 242 Query: 309 PQENMESGLNKTVCWYLDN 327 + ++E GL +++ ++ +N Sbjct: 243 SKISLEEGLRQSIEYFKEN 261 >gi|117928883|ref|YP_873434.1| UDP-galactose 4-epimerase [Acidothermus cellulolyticus 11B] gi|117649346|gb|ABK53448.1| UDP-galactose 4-epimerase [Acidothermus cellulolyticus 11B] Length = 329 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 43/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG+IGS + R L+ D V+V+D L+ G+ +++ F+ DI Sbjct: 1 MKVLVTGGAGYIGSVVTRVLIEDGH-DVVVLDDLS-TGHRDAVPA-----GVPFVHADIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A + F D +++FAA+S V S+ + + TN+ GT LL+ R Sbjct: 54 DAGDVL-AREPF--DGVLHFAAKSLVGESMNRPELYWATNVCGTRHLLDAMR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY---GI 177 + R + ST VYG ED P P+SPY +K + D ++ Y + Sbjct: 103 -RHSVPRLIFSSTAAVYGEGGPDGIGEDTPPRPTSPYGTSKLAVDLMISDECRAYPLGAV 161 Query: 178 PVLLSNCSNNYGP----YHFPEKLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 + N + YGP + LIP+ + H+ +YG DG +RD+++V Sbjct: 162 SLRYFNVAGAYGPCGERHRTETHLIPITLDVAAGRRPHLEIYGNDWPTPDGTCMRDYIHV 221 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D RA + L+ R G YN+G ++V + + +P + Sbjct: 222 LDLARAHVVALQHARPGHHAIYNLGNGRGFSVREVVAAVERVTGRRVP--------VTVA 273 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 RPG D S+ ++E+ W PQ ++++ Sbjct: 274 PRRPGDPAWLVADDSRARAELNWQPQADLDT 304 >gi|332293418|ref|YP_004432027.1| NAD-dependent epimerase/dehydratase [Krokinobacter diaphorus 4H-3-7-5] gi|332171504|gb|AEE20759.1| NAD-dependent epimerase/dehydratase [Krokinobacter diaphorus 4H-3-7-5] Length = 333 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 156/346 (45%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKE--- 45 M+++VTG AGFIG LC+ L +ND L D+L G + E Sbjct: 1 MKILVTGAAGFIGYHLCKRLLSEGHTVVGLDNINDYYDPQLKFDRLKELGVVREQAEKWN 60 Query: 46 -ISQSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +S SNL F F+++++ DRE + K D + N AA++ V SI + ++ TNI Sbjct: 61 TLSTSNLEDNFLFIRLNLQDREGLPILFKRNSFDQVCNLAAQAGVRYSIDNPEVYVDTNI 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSAT 160 +G +LE R C + + S+ VYG+ + F+E + P S Y+AT Sbjct: 121 VGFLNILECCR---DCKVS------KLVYASSSSVYGNSKEVPFTEKQSVDEPISIYAAT 171 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + H + I + YGP+ P+ + L ++ + ++ +G Sbjct: 172 KKSNELMAHTYSHLFNIETIGLRFFTVYGPWGRPDMAMFLFTDAILNKRPIKVFNEGNLS 231 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 RD+ Y+ D + + V+ ++ YNIG + K +D + ++ T Sbjct: 232 RDFTYISDIIEGVITVITGTSRTKKPIYNIGNSEPVKLLDFI--------TVLESELGIT 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + + G R D S ++++ G+ P ++ G+ + WY Sbjct: 284 AIKQMMPMQDGDVHRTWADVSSLQNDFGYAPSVSVAEGIAAFLAWY 329 >gi|186681831|ref|YP_001865027.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] gi|186464283|gb|ACC80084.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] Length = 336 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 160/348 (45%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 ++++VTG AGFIG L + L+ +V +D L Y NL L ++ ++ F F Q Sbjct: 2 IKVLVTGAAGFIGFHLSQRLLARGN-EVFGLDNLNDYYDVNLKKARLAKLQDNSSFKFYQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ DRE + E D + N AA+ V S+ +I +N++G +LE R Sbjct: 61 VDLADRESMAMLFAEEGFDVVANLAAQPGVRYSLKNPHAYIDSNVVGFINVLEGCR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F S+ VYG+ K FS D +P S Y+ATK +++ + + H Y Sbjct: 117 ---HSRVKHLVF--ASSSSVYGANTKVPFSVHDKVDHPVSLYAATKKANELMAHTYSHLY 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+P YGP+ P+ + P T+ I G + ++ GQ RD+ Y++D V + Sbjct: 172 GLPTTGLRFFTVYGPWGRPD-MAPFLFTKAILAGESINVFNYGQMRRDFTYIDDIVEGVI 230 Query: 235 LVLKK-----GRIGER-------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+ K + E+ YNIG N ++++++ I + + L K+ Sbjct: 231 HVIDKIPKPNSSLSEKASDSEISNAAYKLYNIGNN---QSVELMRFIEVIENCLGMKAEK 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + +++G+ P +E G+ + V WY Sbjct: 288 N-----LLPMQPGDVPVTYADVDDLATDVGFRPNTPIEVGVERFVSWY 330 >gi|328552351|gb|AEB22843.1| CDP-glucose 4,6-dehydratase [Bacillus amyloliquefaciens TA208] Length = 300 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 28/293 (9%) Query: 39 NLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 NL +++ Q N+ +Q + D + I AL E++ D + + AA++ V + Sbjct: 23 NLYQGEQVKQMNI---VQGALEDLDVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFE 79 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYS 158 NI+GT+ +LE R R + S+D+ YG + E+MP PY Sbjct: 80 ANILGTWNILEACRRHPLIK--------RVIVASSDKAYGDQPTLPYDENMPLQGKHPYD 131 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDG 217 +K+ +D L + +TYG+PV ++ C N YG ++IP I ++ G + DG Sbjct: 132 VSKSCADLLSHTYFNTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDG 191 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR----IGERYNIGGNNERKNIDIVFEIGFLLDA-LIP 272 +RD+ Y+ED V A L+ +K GE +N + +++V +I +D+ L P Sbjct: 192 TFIRDYFYIEDAVEAYLLLAEKMEELNLAGEAFNFSNEIQLTVLELVEKILKAMDSDLKP 251 Query: 273 KSYSHTELIRFIEDRPGHDRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K + ++ H+ ++ + + K + + W P ++ GL KT+ WY Sbjct: 252 K----------VLNQGSHEIKHQYLSAEKARKLLNWTPAHAIDEGLEKTIEWY 294 >gi|284052279|ref|ZP_06382489.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str. Paraca] gi|291571405|dbj|BAI93677.1| nucleotide sugar epimerase [Arthrospira platensis NIES-39] Length = 333 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 161/345 (46%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG LC++L+ V+ ID L YA +L + + ++ F+F + Sbjct: 1 MKILVTGAAGFIGFHLCQHLLKRGD-TVIGIDNLNDYYAVSLKEDRIAQLKPLEKFTFYK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+CD+ I+ E Q +A+ + AA++ V S+ +I +N++G +LE R Sbjct: 60 LDLCDKVGIKKLFSEHQFEAVAHLAAQAGVRYSLKNPYAYIDSNLVGFINVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F S+ VYGS FS D P S Y+ATK +++ + ++ H Y Sbjct: 116 ---HHQIPHLVFA--SSSSVYGSNKTVPFSVGDYVDYPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP++ P+ + + ++ + ++ G RD+ YV+D V + Sbjct: 171 HIPTTGLRFFTVYGPWYRPDMAMFIFTKAILADQPIPVFNYGNMERDFTYVDDVVEGVIR 230 Query: 236 VL----------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 V+ K + YNIG N K +++++ I L + L K+ + Sbjct: 231 VIDKIPQPGSNQAEIEGVKTTAPYQIYNIGNN---KPVNLLYLIEVLENVLGKKAQKN-- 285 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + + +++G+ P +E G+ K V WY Sbjct: 286 ---MLPMQPGDVPITYANVDSLIADVGFKPSTPIEVGVEKFVAWY 327 >gi|239637688|ref|ZP_04678658.1| VI polysaccharide biosynthesis protein VipB/tviC [Staphylococcus warneri L37603] gi|239596713|gb|EEQ79240.1| VI polysaccharide biosynthesis protein VipB/tviC [Staphylococcus warneri L37603] Length = 309 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 30/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS + + + I+V VID L+ G + ++ + + F Q DI Sbjct: 1 MKALITGGAGFIGSHIAHKCLQN-NIEVHVIDNLS-TGRIENIPYVKKE---YFYQEDIN 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +K+ Q D +++ AA V ++ NI T +LE RL S + Sbjct: 56 NLKFVSDLIKKEQFDYVIHLAAVVSVVETVQQPGRSNQVNIDATLNILETLRLQHSNVK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RFL S+ VYG L+ + +P SPY+ K + + + Y +P + Sbjct: 115 ------RFLFASSAAVYGQLEGLPKAIHSRIDPRSPYAVQKYAGESYAKIYHQLYQLPTV 168 Query: 181 LSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P +I + + YGDG RD++Y++D V A +LV Sbjct: 169 SLRFFNVYGPKQNPYSDYSGVISILNHKFKHKETFTFYGDGLQTRDFIYIDDLVEACWLV 228 Query: 237 LKKGRI-GERYNIGGNNER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + G YN+G + K + +FE F + IP Y E+R G + Sbjct: 229 LHNDNVNGNVYNLGTGKQTTLKQMVNIFEQHF--NYSIPYVYD--------EERVGDIKH 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D S I+S +G+ PQ ++E G+ Sbjct: 279 SYADISPIQS-LGFNPQYSVEKGI 301 >gi|209963862|ref|YP_002296777.1| CDP-paratose 2-epimerase [Rhodospirillum centenum SW] gi|209957328|gb|ACI97964.1| CDP-paratose 2-epimerase [Rhodospirillum centenum SW] Length = 351 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 149/348 (42%), Gaps = 46/348 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 +++TGGAGF+G+ L L + + +V+V+D L+ G NL L+ + + L DI Sbjct: 1 MLITGGAGFVGTNLADRLAREGR-RVIVLDDLSRPGVERNLAWLRAMHGDRILPEL-ADI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + A+ A+ + AA+ V S+ N GT +LE R + Sbjct: 59 RDGERLGRAVARSA--AVFHLAAQVAVTTSLRDPVHDFEVNACGTLRVLEAVR------A 110 Query: 120 QDKKDQFRFLQISTDEVYGSLD------------------KGLFSEDMPYNPSSPYSATK 161 Q + F ST++VYG+L G ED P + SPY +K Sbjct: 111 QPEPPPLVF--SSTNKVYGALPDLELVEEADRCRPADPGHAGGVREDRPLDFHSPYGCSK 168 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQ 218 ++D VL + +YG+P + S YGP+ F + + + EG + L+G G+ Sbjct: 169 GAADQYVLDYARSYGLPATVFRMSCIYGPHQFGTEDQGWVAHFLIAAAEGRTITLFGTGR 228 Query: 219 NVRDWLYVEDHVRALYLVL--KKGRIGERYNIGGNNERK-NIDIVFEIGFLLDALIPKSY 275 VRD L+ +D V A L L + G +NIGG ++ V E LD +P Sbjct: 229 QVRDILHADDLVDAFLLALGNRDAVSGRAFNIGGGPANAVSLREVLEQIAGLDGRLPA-- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + R G Y D S+ + GW P G+ + W Sbjct: 287 -----VEYGPWRTGDQPWYVADISRFRQATGWTPGIAAADGIARLHRW 329 >gi|114321825|ref|YP_743508.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii MLHE-1] gi|114228219|gb|ABI58018.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii MLHE-1] Length = 335 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 86/355 (24%), Positives = 159/355 (44%), Gaps = 57/355 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ ++TG AGFIG + L+ +V+ +D L Y L L + F F++ Sbjct: 1 MKHLITGAAGFIGYHTAQALLARGD-EVVGLDNLNDYYDPRLKRARLARLEGQPGFRFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + + +++ AA++ V S+ ++ +N+ GT +LE R Sbjct: 60 LDLADRAGMAELFRAERFQRVIHLAAQAGVRHSLTDPYSYVDSNVSGTLNVLEGCRY--- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 D ST VYG+ EDMP+ +P + Y+ATK +++++ Sbjct: 117 ------NDVEHLTYASTSSVYGA------HEDMPFTEHRHTDHPLAIYAATKKATEHMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+P YGP+ P+ + L +++ G + +Y +G + RD+ YV+D Sbjct: 165 SYAHLYGLPCTGLRFFTVYGPWGRPDMALFLFTRKILAGEPIDIYNNGDHGRDFTYVDDI 224 Query: 230 VRALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDA 269 V ++ R+ R YNIG N + + ++ + L +A Sbjct: 225 VDG--VIRASDRVARRNPEWDPKRPDTATSNAPWRIYNIGAN---RPVRLMHYVEVLEEA 279 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L K+ + F+ +PG D S + + G+ P+ ++E G+ + V WY Sbjct: 280 LGRKAEKN-----FLPLQPGDVPETHADVSALAQDTGYSPKVSVEEGIRRFVDWY 329 >gi|119493841|ref|ZP_01624408.1| capsular polysaccharide biosynthesis protein I [Lyngbya sp. PCC 8106] gi|119452433|gb|EAW33622.1| capsular polysaccharide biosynthesis protein I [Lyngbya sp. PCC 8106] Length = 329 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 35/341 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG LC+ L+ V+ +D L Y +L ++++S F+F Q Sbjct: 1 MKILVTGAAGFIGFHLCQKLLQRGD-TVIGLDNLNSYYEVSLKKARIEQLSSLKKFTFYQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E Q DA+V+ AA++ V S+ ++ +N+ G +LE R Sbjct: 60 LDLVDREQLEKLFSEQQFDAVVHLAAQAGVRYSLENPYAYVDSNLTGFLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ K F+ ED P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HTHVGHLVFASSSSVYGTNKKIPFAVEDNVDYPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + L +++G + ++ G+ RD+ Y++D V + Sbjct: 171 NIPSTGLRFFTVYGPWGRPDMAVFLFTKAILDGKPIKVFNYGKMQRDFTYIDDLVEGIVR 230 Query: 236 VLKK------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V+ K + YNIG N K I+++ I L + L + Sbjct: 231 VVDKIPQPNLHPESNTKAPYKIYNIGNN---KPIELLRLIEVLENCL-----EKEAVKEM 282 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + + ++G+ P +E G+ + V WY Sbjct: 283 LPMQPGDVPITYANVDALIQDVGFSPDTPIEVGIKRFVEWY 323 >gi|93005447|ref|YP_579884.1| NAD-dependent epimerase/dehydratase [Psychrobacter cryohalolentis K5] gi|92393125|gb|ABE74400.1| NAD-dependent epimerase/dehydratase [Psychrobacter cryohalolentis K5] Length = 333 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 35/336 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 ++ +TGGAGFIGS L L+ + +++V D L N+LK +N + +Q ++ Sbjct: 8 KIFITGGAGFIGSTLIGRLIENN--EMIVYDNLER----NTLKSQPFANHKNLTLIQGNV 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E I A K + ++ AA + +D ++ +T N+IGT LE + Sbjct: 62 LDQEKIIEAAK--GSEIFIHAAAIAGIDNTVKSPVRTMTVNMIGTANALEAAHQAGTVQ- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKASSDYLVLAWG 172 RFL+ ST EV+GS + +++ + Y+ +K + ++L A+ Sbjct: 119 -------RFLEFSTSEVFGS--RAYRVDELNSTTTGAVGEARWTYAVSKLAGEHLTHAYN 169 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+P + N YGP E I + I + + ++++GDG +R W YV+D + A Sbjct: 170 REHGLPTVTFRPFNVYGPGQIGEGAISIMIRKALNNEDIYIFGDGSQIRAWCYVDDMIDA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L + IGE +NIG N + I L + S +E+I F E Sbjct: 230 LMKALSVPQAIGESFNIG------NARAITTIYGLAQTICRVLNSKSEII-FREALSADI 282 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + K + +G+ Q ++E GL +T W N Sbjct: 283 ELRIPNVDKSEELLGFKAQVDLEEGLIRTADWLSAN 318 >gi|145220024|ref|YP_001130733.1| NAD-dependent epimerase/dehydratase [Prosthecochloris vibrioformis DSM 265] gi|145206188|gb|ABP37231.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeovibrioides DSM 265] Length = 352 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 159/353 (45%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M+++VTG AGFIGS + R L+ D++T N+N SLKE L Sbjct: 15 MKVLVTGAAGFIGSNVSRRLLERG-------DRVTGIDNMNDYYDVSLKEARLERLTGQE 67 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F+++D+ DR+ + E D +VN AA++ V S++ +I +NI+G +LE Sbjct: 68 NFRFVKMDLADRKAMEELFAEGGFDRVVNLAAQAGVRYSLINPHSYIESNILGFTNILEG 127 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG+ + FS D +P S Y+A+K +++ + Sbjct: 128 CR---------HNGVEHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAH 178 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +P YGP+ P+ + L +I+G + ++ G++ RD+ Y++D Sbjct: 179 TYSHLYQLPTTGLRFFTVYGPWGRPDMALFLFTDAIIKGKPIKVFNYGKHRRDFTYIDDI 238 Query: 230 VRALYLVLK-----------------KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALI 271 V + L R R YNIG + K ++++ IG L Sbjct: 239 VEGVIRTLDHVAEPNPDWSGLQPDPGSSRAPWRVYNIGNS---KPVELMDYIGAL----- 290 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T F+ +PG D ++ ++ + PQ +++ G+ + V WY Sbjct: 291 ERELGKTAEKEFLPLQPGDVPDTYADVEQLMEDVQYKPQTSVDEGIKRFVVWY 343 >gi|328910699|gb|AEB62295.1| CDP-glucose 4,6-dehydratase [Bacillus amyloliquefaciens LL3] Length = 301 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 28/293 (9%) Query: 39 NLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 NL +++ Q N+ +Q + D + I AL E++ D + + AA++ V + Sbjct: 24 NLYQGEQVKQMNI---VQGALEDLDVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFE 80 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYS 158 NI+GT+ +LE R R + S+D+ YG + E+MP PY Sbjct: 81 ANILGTWNILEACRRHPLIK--------RVIVASSDKAYGDQPTLPYDENMPLQGKHPYD 132 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDG 217 +K+ +D L + +TYG+PV ++ C N YG ++IP I ++ G + DG Sbjct: 133 VSKSCADLLSHTYFNTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDG 192 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR----IGERYNIGGNNERKNIDIVFEIGFLLDA-LIP 272 +RD+ Y+ED V A L+ +K GE +N + +++V +I +D+ L P Sbjct: 193 TFIRDYFYIEDAVEAYLLLAEKMEELNLAGEAFNFSNEIQLTVLELVEKILKAMDSDLKP 252 Query: 273 KSYSHTELIRFIEDRPGHDRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K + ++ H+ ++ + + K + + W P ++ GL KT+ WY Sbjct: 253 K----------VLNQGSHEIKHQYLSAEKARKLLNWTPAHAIDEGLEKTIEWY 295 >gi|226354957|ref|YP_002784697.1| UDP-glucose 4-epimerase [Deinococcus deserti VCD115] gi|226316947|gb|ACO44943.1| putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Deinococcus deserti VCD115] Length = 330 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 50/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+V GGAG+IGS R L +V+V+D L+ +G+ +L E + +Q D+ Sbjct: 1 MKLLVVGGAGYIGSHTVRQLRRSGH-EVVVLDNLS-SGHREALPED-----VTLVQQDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +++ L+ +PDA+++FAA V S+ + N++G+ LL+ + + Sbjct: 54 DAEGVKATLQAHEPDAVIHFAALIEVGESMRAPARYYRNNVVGSLNLLQ-------AIVE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F ST VYG+ D E+ P P S Y TK ++ ++ A+ +G+P + Sbjct: 107 TRKIPLVF--SSTAAVYGTTDAVPIPENAPMQPESVYGETKLMTERMIHAFHTAHGLPYV 164 Query: 181 L--------SNCSNNYGPYHF-PEKLIPL-AITRMIEGSHVFLYG------DGQNVRDWL 224 + + + G H LI L A+T + + + ++G DG +RD++ Sbjct: 165 ILRYFNVCGAAPEGDIGEAHANKTHLIELAALTALGQREKMMIFGDDYPTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSH 277 +V+D HV A+ + YN+G G + R+ +D V DA+ K + Sbjct: 225 HVQDLADAHVLAVEALHSGKTQAATYNVGLGHGFSVREVLDAV-------DAVTGKPLTR 277 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R D P R D+++I ++G+ P+ Sbjct: 278 ELAPRRAGDPP----RLVADATRIVKDLGFKPR 306 >gi|15894018|ref|NP_347367.1| fused nucleoside-diphosphate-sugar epimerase/GAF domain-containing protein [Clostridium acetobutylicum ATCC 824] gi|15023612|gb|AAK78707.1|AE007588_5 FUSION: Nucleoside-diphosphate-sugar epimerase and GAF domain [Clostridium acetobutylicum ATCC 824] gi|325508145|gb|ADZ19781.1| FUSION: Nucleoside-diphosphate-sugar epimerase and GAF domain protein [Clostridium acetobutylicum EA 2018] Length = 725 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 34/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++ GG GFIGS + L + + +ID L+ GNL K ++ + F L ++ Sbjct: 1 MRILIVGGCGFIGSHVVERLYKEGH-KTYIIDNLS-TGNL---KNVTVPHKFYNLSIE-- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF-ITTNIIGTFILLEETRLWWSCLS 119 E K + DA+++ + S V + A F +T ++ G LL + + Sbjct: 54 -SESCEEVFKANKFDAVIDLS--SPVVNTNAEASSFELTPSVKGITNLLNFSSKYGVK-- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VYG+ + E+ NP SPY+ K ++ W YG+ Sbjct: 109 -------RFIFASSASVYGN-NNLTIKEEAEINPLSPYAVNKYVGEFYTQKWFEIYGLKT 160 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + SN +GP + ++ L I + ++ S + +GDG RD++YVED V A+Y Sbjct: 161 ISLRISNVFGPRQSIKGEGNVVALFINKALKSSEIDRFGDGTQTRDFIYVEDVVDAIYKA 220 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G NI N E + L+D L + + + + +R G ++ + Sbjct: 221 LESDYTG-VLNISTNTEH-------SLNELIDTL--EEFHPIRKVNYRLNRSGDIKKSKL 270 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D+SK K+E+GW + + + L KT WY N Sbjct: 271 DNSKAKTELGWDTKYSFRAALEKTYDWYKKN 301 >gi|312109997|ref|YP_003988313.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y4.1MC1] gi|311215098|gb|ADP73702.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y4.1MC1] Length = 313 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 26/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+++VTGGAGFIGS L L++ L V VID Y + ++ NL + Sbjct: 1 MKILVTGGAGFIGSHLVAKLLS-LGHDVAVIDNFHPYYPAERKKRQFRALTGGNLPVY-H 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D E +QPD + + AA V S+L +++ +I T +L+ + Sbjct: 59 IDLLDGEKTEELFCRYQPDCVYHLAALPGVPNSLLQPLDYVDYDIKATINVLKAAVM--- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 L S+ VYG+ E+M SPY+A K ++ A+ H + Sbjct: 116 ------AGVRHVLFASSSSVYGNQGNVPLKEEMAAGQVVSPYAAAKYGAESFCYAYAHLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G V + YGP+ P+ I I ++ G + +YG G RD+ +V+D V + Sbjct: 170 GYQVTIFRYFTVYGPWGRPDMAISKFIRHLLRGEEIVVYGTG-TARDYTFVDDVVSGMVA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L +G + +N+G ++ E+ K++ T ++ +R G + Sbjct: 229 ALGRGGGNDVFNLGSGRPIAMERLLQEL---------KAHFPTMKVKHAPERKGDVKATW 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P E GL +T+ W Sbjct: 280 ADITKAQRAFGYKPSITFEVGLARTIAW 307 >gi|115378431|ref|ZP_01465592.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Stigmatella aurantiaca DW4/3-1] gi|310823264|ref|YP_003955622.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Stigmatella aurantiaca DW4/3-1] gi|115364577|gb|EAU63651.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Stigmatella aurantiaca DW4/3-1] gi|309396336|gb|ADO73795.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Stigmatella aurantiaca DW4/3-1] Length = 315 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 43/332 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG GF G LC L D++ A + E SN +F DI Sbjct: 1 MRVLVTGADGFAGRHLCALLRAS-------GDEVVEAHGPRA--EGMNSNALNF---DIA 48 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R+A+++ +P+ +++ A + V RS N GT LL R Sbjct: 49 DEAAVRAAVEKARPEGVIHLAGFASVARSHGNPARVFAVNTQGTVNLLIALR-------- 100 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R L IS+ EVYG + +G +E+ +P P SPY+A+K +++ + +YG+PV Sbjct: 101 EAAPKTRVLLISSGEVYGPVTEGTRAEETLPPVPLSPYAASKIAAELAGEQFFRSYGLPV 160 Query: 180 LLSNCSNNYGPYHFPEKLIP--LAITRMI---EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +L+ N+ G P ++P A R I + S V G+ +RD+ +V+D V A Sbjct: 161 VLARPFNHLGEGQDPTFVVPSFAAQLRAIAQGKASPVLRTGNLDAIRDFSHVKDVVAAYR 220 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L+L G G+ YN+ R +I V E L + + IE P R Sbjct: 221 LLLTAGVPGQTYNVCSGTAR-SIRAVLEEMLALSGVAAR----------IELDPARLRPS 269 Query: 295 AIDS-----SKIKSEIGWFPQENMESGLNKTV 321 I S K+++ +GW P+ ++ L + + Sbjct: 270 EIPSLVGSPDKLRA-LGWQPKSSVTEALREVL 300 >gi|206895226|ref|YP_002246797.1| dTDP-glucose 4,6 dehydratase [Coprothermobacter proteolyticus DSM 5265] gi|206737843|gb|ACI16921.1| dTDP-glucose 4,6 dehydratase [Coprothermobacter proteolyticus DSM 5265] Length = 312 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 148/331 (44%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+N+ +V +D L G++ +++ ++ LF F+Q D+ + Sbjct: 3 RVLVTGGAGFIGSHLCERLLNEGN-EVFCMDNLE-TGSIRNIETFKENPLFHFIQQDVIE 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + D I NFA + R + T+++G LLE L+ + Sbjct: 61 P-------IELRVDEIFNFACPASPPRYQKDPVHTLKTSVLGALNLLE--------LATN 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 + +Q ST EVYG E P P S Y K ++ L +G +G Sbjct: 106 TGA--KIMQASTSEVYGDPAISPQPETYWGNVNPIGPRSCYDEGKRCAETLFFDYGRQFG 163 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N YGP PE +++ I + ++ + +YGDG R + Y++D + + Sbjct: 164 TKIKVIRIFNTYGPRMDPEDGRVVSNFIAQALKNEPLTVYGDGSQTRSFCYIDDLIEGIM 223 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ N+G E V E+ L+ L S S E +D P +R Sbjct: 224 SMMQTDESFSGPVNLGNPEEV----TVLEVAKLVLELT-CSKSEIEFRPLPQDDP---KR 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +GW P ++ GL T+ ++ Sbjct: 276 RKPDITLARQTLGWEPTVKLKEGLITTIQYF 306 >gi|195953829|ref|YP_002122119.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933441|gb|ACG58141.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 322 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 28/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVD 58 ++VTG AGFIG + L+ + ++ +D + L L + F F +D Sbjct: 4 ILVTGAAGFIGWKVSTLLLEE-GYNIVGVDNINDYYDVKVKLWRLDTLKSHENFKFYPID 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +++ + ++ DAI+N AA + V S+ +++TN +G LLE + + + Sbjct: 63 IENKQALEVIFQDNHIDAIINEAARAGVRYSLENPFVYLSTNTLGVLNLLELAKNFGTR- 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 +F+Q ST +Y K F E++P N P SPY+A+K ++ ++ ++ + YGI Sbjct: 122 --------KFVQASTSSLYAG-QKMPFVEELPVNTPISPYAASKKGAEAMLYSYHYLYGI 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V + YGP P+ I I + + + L+GDG RD+ Y++D + L Sbjct: 173 DVSILRYFTVYGPAGRPDMSIFRFIKWIYQEEPIELFGDGSQSRDFTYIDDIAKGTIKAL 232 Query: 238 KKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K +G E N+G N K +++ I LI I + E Sbjct: 233 KP--LGYEIINLGNNKPDK---LIYAI-----ELIESYLGKKAKINYKEFHKADMMATWA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 D +K K+ + W P ++E G+ V W L NW W Sbjct: 283 DITKAKNLLEWSPTVSLEEGIKNAVEWTL-KNWDW 316 >gi|118443711|ref|YP_877861.1| UDP-glucose 4-epimerase [Clostridium novyi NT] gi|118134167|gb|ABK61211.1| UDP-glucose 4-epimerase [Clostridium novyi NT] Length = 331 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 36/343 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV +L +V + + N +++ + + N+ + D Sbjct: 7 KVLVTGAEGFIGSHLTERLV-ELGAEVTALVQYNSFNNWGWIDTFDKNVKDNI-KVITGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + ++ + + I++ AA + S L ++ TN+ GT +LE R Sbjct: 65 VREYDSVKRMVS--GQEVIMHLAALIAIPYSYLSPMAYVRTNVEGTTNILEACR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+K+ + + ST E YG+ E P SPYSA+K +D + ++ ++ +P Sbjct: 117 --DEKNIEKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIGADKMAESFYRSFNLP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 175 IATIRPFNTYGPRQSARAVIPTIISQILAGKREIKLGSLTPTRDFNYVKDTAEAFVKIAE 234 Query: 239 KGR-IGERYNIGGNNE-------RKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + IGE N G N E +K ID++ ++ L D E IR ++ Sbjct: 235 SEKTIGEVINAGSNYEISIGDTAKKIIDLIGHDVKILCDE---------ERIR--PEKSE 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +R +A D++KIK+ W P+ +++ GL +T+ W +N +++ Sbjct: 284 VNRLWA-DNTKIKNLTDWTPKYSIDEGLKETIEWIKNNMQYFK 325 >gi|261220376|ref|ZP_05934657.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94] gi|260918960|gb|EEX85613.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94] Length = 337 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 41/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+N+ V+ +D + G + +++ + + FSF++ DI + Sbjct: 20 VLVAGGAGFLGSHLCERLLNEGH-SVICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNT 77 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R D I N + + TN+IG+ LLE + + Sbjct: 78 LDLRV-------DEIYNLVCPASPPHYQADPVHTMKTNVIGSLNLLELAAHYKA------ 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R Q ST EVYG E+ + P S Y K S++ L + YG+ Sbjct: 125 ----RIFQASTSEVYGDPHVHPQPENYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + + Sbjct: 181 DIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHR 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF---IEDRPGHD 291 L+ I NIG E F +G L + +I + S + ++ + ++D Sbjct: 241 LMYSPHAIRVPVNIGNPGE-------FTVGALAEQIIAMTGSRSRIVYYPLPVDD----P 289 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K E+GW P + GL T+ ++ Sbjct: 290 RQRRPDITVAKRELGWEPTVALAQGLEPTIAYF 322 >gi|229582895|ref|YP_002841294.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|228013611|gb|ACP49372.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] Length = 306 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 43/334 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +++GGAGF+GS L YL + +++V+D + S + F Sbjct: 1 MRFLISGGAGFLGSHLIEYLRDH---EIVVVD------------DFSTAKYFELYSNVKL 45 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +E I + + D +++ AA + E + +N +GT+ LE R Sbjct: 46 IKEKIENFNTNEKFDYVIHLAARPSPEDYTKYPVETMLSNSLGTYRTLEIAR-------- 97 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K ++ S+ EVYG+ + ED P S Y +K S+ L++++ Y Sbjct: 98 --KSDAIYMYTSSSEVYGNAEIIPTPEDYWGKVNPIGIRSCYDESKRFSEALIMSYYREY 155 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V + N YGP + +++ I + ++G + +YGDG+ R +LYVED V Sbjct: 156 GLDVRIQRPFNVYGPRLREDGSYGRVVSRFIYQALKGEDITIYGDGKQTRAFLYVEDWVE 215 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A L ++ KG GE NIG + E + ID L + +I + S ++ IR++ RP Sbjct: 216 ATLKMLFTKGLKGEVINIGSDKETRIID-------LANMIITLTGSKSK-IRYLPPRPDD 267 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A D SK K + W P+ ++E GL KT+ W+ Sbjct: 268 PPRRAADISKAKRLLNWEPKISLEEGLKKTIEWF 301 >gi|240103010|ref|YP_002959319.1| UDP-glucose 4-epimerase, putative (galE) [Thermococcus gammatolerans EJ3] gi|239910564|gb|ACS33455.1| UDP-glucose 4-epimerase, putative (galE) [Thermococcus gammatolerans EJ3] Length = 310 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 154/326 (47%), Gaps = 33/326 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS + LV D +V+VID L Y G ++ ++ ++ DI D Sbjct: 6 VVITGGAGFIGSHIAWELVKDN--EVIVIDNL-YTGRAENVPPGAK-----LVKADIRDY 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I + D + + AA+ V SI N++GT +L + L Sbjct: 58 DAIAELIS--HADYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNILR------ALLEGHG 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K F S+ VYG E P SPY TKA+++ + + YG+PV+ Sbjct: 110 KLIF----ASSAAVYGDNPNLPLKETERPRPLSPYGVTKATAEEYLRVYHELYGLPVVAL 165 Query: 183 NCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP + +I + I R + G + ++GDG+ RD++YV+D V+A LV + Sbjct: 166 RYFNVFGPRQSANQYAGVISIFIKRALAGEPLVIFGDGKQTRDFIYVKDVVKANLLVAES 225 Query: 240 GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 R G +N+ + +++ + I + T I F + RPG R D Sbjct: 226 RRANGRVFNVATGRQTSILELAMK--------IVEITGTTSSIIFDKPRPGDIRHSLADI 277 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 +I+ ++G+ P+ ++E GL +TV ++ Sbjct: 278 GEIR-KLGFEPEFSLEEGLKRTVEFF 302 >gi|203284353|ref|YP_002222093.1| nucleotide sugar epimerase [Borrelia duttonii Ly] gi|201083796|gb|ACH93387.1| nucleotide sugar epimerase [Borrelia duttonii Ly] Length = 352 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 54/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-----------------AGNLNSL 43 MR+++TG AGFIG + + L +D +VL ID L + N+++ Sbjct: 1 MRVLLTGIAGFIGFHVAKKLADDGH-EVLGIDILNNYYDPSLKYERLEILGFNSENIDNK 59 Query: 44 KEIS--QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 K ++ + N SF+ +DI ++E + S ++ I + AA++ + SI D +I NI Sbjct: 60 KVVNSHKYNNLSFVNLDILNKEQVLSLFNNYKFTHICHLAAQAGIRDSIENPDSYIAINI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G F +L+ R++ + F+ ST VYG +K SED + +P + Y+A+ Sbjct: 120 VGFFNILDACRIYKDSIEH-------FVYASTSAVYGLNEKMPSSEDSITDHPLNLYAAS 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ ++ IP YGPY P+ + L ++ S + ++ +G Sbjct: 173 KKSNEVIAHAYSSSFNIPTTGLRFFTVYGPYGRPDMALYLFADGIMRQSTINVFNNGDMA 232 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ YV+D V + VLKK + YN+G K ++ + E Sbjct: 233 RDFTYVDDVVNGVCNVLKKPARSDSNFDTQNPNSSSSFAPYRIYNVGTGQAVKLMEFINE 292 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + L+ K++ + +E D SK+K++ + +++ G+ K Sbjct: 293 LEINLENKACKNFLPMQKADVVES--------CCDISKLKNDFAYEALTSIKDGIRKFAI 344 Query: 323 WY 324 WY Sbjct: 345 WY 346 >gi|126652470|ref|ZP_01724642.1| dTDP-glucose 4,6-dehydratase [Bacillus sp. B14905] gi|126590741|gb|EAZ84856.1| dTDP-glucose 4,6-dehydratase [Bacillus sp. B14905] Length = 334 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 29/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQV-- 57 +++VTG GFIGS L LV Q + Y + NS + QS+ + S L V Sbjct: 5 KILVTGADGFIGSHLTETLVR----QGYEVRAFVYYNSFNSWGWLDQSSSEIKSSLDVFS 60 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D ++ A+K ++N AA + S ++ TN+ GT +++ + Sbjct: 61 GDIRDPYGVKEAMKGCT--HVLNLAALIAIPYSYHSPATYVDTNVTGTLNVVQAAK---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +K + ST EVYG+ E+ P SPYSA+K +D + L++ ++ Sbjct: 115 ELGVEK-----VVHTSTSEVYGTALYVPIDEEHPLQGQSPYSASKIGADQMALSFYRSFD 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP +IP I+++ G G RD+ YV+D V V Sbjct: 170 TPVSVVRPFNTYGPRQSARAVIPTIISQLASGKKNIKLGAVSPTRDFNYVKDTVNGFISV 229 Query: 237 LKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ IGE NIG N E + I + D + T+ R ++ +R +A Sbjct: 230 MESTNSIGEVINIGSNYE---VSIGETAQMIADIMGVDLTIETDEHRLRPEKSEVERLWA 286 Query: 296 IDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 ++ K K +GW PQ E GL +T+ W+ + Sbjct: 287 -ENKKAKELLGWEPQYGGKEGFHRGLEETIEWFTN 320 >gi|157961245|ref|YP_001501279.1| NAD-dependent epimerase/dehydratase [Shewanella pealeana ATCC 700345] gi|157846245|gb|ABV86744.1| NAD-dependent epimerase/dehydratase [Shewanella pealeana ATCC 700345] Length = 336 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L +V+ ID + Y NL + LK + LFSF + Sbjct: 1 MKYLVTGAAGFIGAKVSERLCA-AGHEVVGIDNINDYYDVNLKLDRLKNLEPLALFSFKK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + E D +++ AA++ V SI + +N++G +LE R Sbjct: 60 LDLADREGIAALFAEQSFDRVIHLAAQAGVRYSIDNPMAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 ----HHKIQ-HLVYASSSSVYGLNSKMPFSTDDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++++G + +Y G RD+ Y++D V + Sbjct: 171 SVPTTGLRFFTVYGPWSRPDMALLKFTNKIVKGEAIDVYNHGNLSRDFTYIDDIVEGIIR 230 Query: 236 V------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + +NIG + K +D + + + KS Sbjct: 231 IQDSIPSANAEWNAAEATPATSSAPYRVFNIGNGSPVKLMDYI--------SALEKSLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ +PG D+ + +G+ PQ ++E G+ K V WY Sbjct: 283 EAIKNMMDMQPGDVHSTWADTEDLFKTVGYKPQTSVEEGVQKFVEWY 329 >gi|311895041|dbj|BAJ27449.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae KM-6054] Length = 309 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGFIG+ L R L + ++ +V V+D L+ N L + + F + I Sbjct: 1 MRVVITGGAGFIGANLARELTSRREVTEVRVVDDLSTGSKAN-LAGVDAA----FFEGSI 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +A DA+V+ AA V RSI N GT +LE R Sbjct: 56 LDPALLDAAFT--GADAVVHLAALPSVPRSIAAPLATHRANATGTLEVLEAAR------- 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYG+ + E M P SPY+ +K +++ + A+ H YG+ V Sbjct: 107 --RAGGLYVVAASSSSVYGANRELPKRESMRTVPMSPYAVSKLAAESYLGAYHHCYGLGV 164 Query: 180 LLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 L N +GP H ++P + + G V ++GDG RD+ YV + L Sbjct: 165 LPLRFFNVFGPLQPAGHAYAAVVPAFLDAALAGRPVTVHGDGGQSRDFTYVGTVTQVLAE 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 VL++ + N+ ++++ +G +L P + H +E RPG R Sbjct: 225 AVLRRVVSADPVNLAFGTRTSLLELIDLLGGVLGG--PVAAEH------VEPRPGDVRDS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S+++ + GL +T W+ Sbjct: 277 QADNSRLRELFPDVVPVPLAEGLRRTADWF 306 >gi|256761418|ref|ZP_05501998.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T3] gi|256682669|gb|EEU22364.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T3] Length = 319 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P+ ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPDSPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LDLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|254294169|ref|YP_003060192.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814] gi|254042700|gb|ACT59495.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814] Length = 324 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 155/336 (46%), Gaps = 30/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIG C+ LV + VL +D + Y +L L+++ F+F++ Sbjct: 1 MTILVTGAAGFIGFHTCKALVARGET-VLGLDNVNGYYDVDLKQARLEQLLSQKNFTFVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D + + A+ + A+++ AA++ V SI + TN+ G F +LE R Sbjct: 60 MDISDNDALERAVSGQKIHAVLHLAAQAGVRYSIENPKVYADTNLQGFFNVLEYAR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ +YG K F+ED + P S Y+ATK S++ + ++ H Y Sbjct: 116 -----NSGVANVVYASSSSIYGGNTKMPFAEDDVTDTPVSFYAATKKSNELMAHSYAHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI + YG + P+ + ++ V ++ +G RD+ Y++D V + Sbjct: 171 GISLTGLRFFTVYGEWGRPDMAYWIFSEKLRRNEPVQIFNNGDMSRDFTYIDDIVTGVIA 230 Query: 236 VLKK--GRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + + +G YN+G + K +D+V I K++ + F + Sbjct: 231 AIDRPASALGLDVPHRVYNLGNDKPEKLMDLV--------GCIEKAFGQELIKEFQPMQL 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G R D S+ + E+G+ P ++E G+ + W+ Sbjct: 283 GDVERTWADISRARKELGFNPHTSLEEGIERFASWF 318 >gi|215425035|ref|ZP_03422954.1| hypothetical protein MtubT9_01028 [Mycobacterium tuberculosis T92] Length = 286 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 31/286 (10%) Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 +F+ + D + I A+++ + + AA +VD+S+ + F+ TN++GT+ +LE R Sbjct: 11 AFISGSVTDGQTIDRAVRDHH--VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVR 68 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYG---SLDKG-LFSEDMPYNPSSPYSATKASSDYLV 168 + + R + +ST EVYG +L +G E P+SPY A+KA++D L Sbjct: 69 RYRN----------RLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLC 118 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 ++ +YG+ V + N +G + LIP + + I G + ++G G RD+LY Sbjct: 119 YSYFRSYGLDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLY 178 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V D V A LVL+ + G+ N + + DIV + A I Sbjct: 179 VSDIVGAYNLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIEHR---------- 228 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + RPG +R+ D S KS IG+ PQ + +++ + W D + Sbjct: 229 DARPGEVQRFPADISLAKS-IGFQPQVEIWDSIDRYINWAKDQPQY 273 >gi|227544119|ref|ZP_03974168.1| possible UDP-glucose 4-epimerase [Lactobacillus reuteri CF48-3A] gi|300909825|ref|ZP_07127286.1| NAD-dependent epimerase/dehydratase [Lactobacillus reuteri SD2112] gi|112943390|gb|ABI26307.1| nucleoside-diphosphate-sugar epimerases [Lactobacillus reuteri] gi|227185890|gb|EEI65961.1| possible UDP-glucose 4-epimerase [Lactobacillus reuteri CF48-3A] gi|300893690|gb|EFK87049.1| NAD-dependent epimerase/dehydratase [Lactobacillus reuteri SD2112] Length = 309 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 151/334 (45%), Gaps = 35/334 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS L LV D I + ID L+ N I+ N+ +F D+CD Sbjct: 3 KVLITGGAGFIGSNLAHALVKDNDITI--IDDLSMGKEEN----IADINV-TFYHHDVCD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E + D I AA S V S++ E N L+ R + Sbjct: 56 SAFMHKLLSENEFDYIYYLAAVSSVADSVVRPLETHRVNQESVVDTLDYIR-------AE 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +FL S+ VYG+ E +P +PY+ K +S+ + +G+ Y +P + Sbjct: 109 KLPIKKFLFTSSAAVYGNAPDFPKMESSHVDPLTPYAIDKYASERFTIDYGNLYNLPTVA 168 Query: 182 SNCSNNYGPYHFPEKL---IPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP PE + IT ++ + F LYGDG RD++YV D V AL + Sbjct: 169 VRFFNVYGPRQNPESPYSGVLSIITECMKNNKPFTLYGDGSQTRDFVYVGDVVNALIKLA 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR----FIEDRPGHDRR 293 + YNI E I+++ ++Y + I+ + + R G + Sbjct: 229 TETDKPTVYNIANGGETTLINVI------------RTYENISGIKLNITYKDGRNGDIMK 276 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK+K+ IG+ PQ ++E GL +Y +N Sbjct: 277 SKADISKLKN-IGFEPQWSLEDGLRNYWKYYSEN 309 >gi|108804019|ref|YP_643956.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108765262|gb|ABG04144.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 317 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 31/329 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTG AGFIGS L L+ + +V+ +D T Y L+ +S + ++ Sbjct: 3 RILVTGAAGFIGSHLVDRLLAE-GCEVVGVDAFTRYYPRERKLRNLSSAAESGRFRLVEG 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEETRLWWSCL 118 D + L +A+ + A E V RS GA + ++ N++ T LLE +W Sbjct: 62 DLLELDLGLLLRGVEAVAHLAGEPGV-RSSWGAGFEVYLRRNVLCTERLLEA--VW---- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ S+ VYG +ED P P+SPY +K S++ LV + G+ Sbjct: 115 ---RAGTPRFVLASSSSVYGPDGGRPVAEDHPLRPASPYGLSKLSAEELVRLYARERGVR 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH----VFLYGDGQNVRDWLYVEDHVRALY 234 + YGP PE +A++R I +H V ++GDG VRD YV D V A Sbjct: 172 GTVLRYFTVYGPRQRPE----MALSRFIAAAHAGRPVEVFGDGGQVRDMTYVSDAVEATV 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L++G G YN+GG + + +L+A+ + E + + E G R Sbjct: 228 AALERG-AGGAYNVGGG-------VRVSVRGMLEAVREVTGRPVEAV-YGEAAAGDVRST 278 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 DS + + E+G+ P+ + G+ W Sbjct: 279 WADSRRAERELGYRPRVGLLEGVAAQAEW 307 >gi|67925414|ref|ZP_00518760.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] gi|67852736|gb|EAM48149.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] Length = 326 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 32/336 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 ++VTG AGFIG +C+ ++N + ID L Y NL + L+++ + FSF Q++ Sbjct: 4 ILVTGAAGFIGFYVCQDILNKGD-NIFGIDNLNNYYDVNLKKHRLQQLKNYDKFSFYQIN 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + + D +++ AA++ V S+ ++ +N++G +LE C Sbjct: 63 IANTNDLVKLFNNNNFDYVIHLAAQAGVRYSLENPYAYVDSNLVGFVNILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG+ K FS +D P S Y+ATK +++ + + H Y I Sbjct: 117 HSKIK---HLVYASSSSVYGANKKIPFSTKDNVDFPISLYAATKKANELMAYTYSHLYQI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ L ++EGS + ++ G+ RD+ Y++D V + V Sbjct: 174 PTTGLRFFTVYGPWGRPDMAYFLFTKAIMEGSPIKVFNHGKMKRDFTYIDDIVEGIVRVS 233 Query: 238 KKGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 K G YNIG N + + + ++ K + F+ +P Sbjct: 234 DKIPQGSELNNNVPAKVYNIGNNQPVQLMTFI--------EVLEKCIGKKAIKEFLPMQP 285 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G D + ++G+ P+ ++E GL+K V WY Sbjct: 286 GDVPMTYADIDDLIKDVGFSPRTSIEEGLDKFVKWY 321 >gi|318061861|ref|ZP_07980582.1| nucleotide-sugar dehydratase [Streptomyces sp. SA3_actG] gi|318080483|ref|ZP_07987815.1| nucleotide-sugar dehydratase [Streptomyces sp. SA3_actF] Length = 322 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D + V D L +GN ++ + ++ F F++ D+ + Sbjct: 12 RALVTGGAGFLGSHLCERLL-DAGLLVDCADNL-LSGNRENIAHLEETPGFRFVECDVSE 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 EC+ + D +++FA + + + + GT L+ Sbjct: 70 PECVERLPGPY--DLVLHFACPASPADYLRHPIQTLDVGSAGT----------RHALALA 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 +D RFL ST EVYG ED P P S Y +K ++ LV A G Sbjct: 118 ARDGARFLLASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDESKRFAEALVTAHASALG 177 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP +++P I + + G + + GDG R +V+D V + Sbjct: 178 TDAGIVRLFNTYGPRMRGHDGRVVPTFIAQALGGEPLTVAGDGTQTRSLCFVDDTVDGVL 237 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 LV R NIGG +E ++I +I L + T I F+E RP D R Sbjct: 238 LVAAS-RAVRPVNIGGGHEVSVLEIAEKILELTGS--------TSRIAFVE-RPADDPAR 287 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D++ + + W P + E GL +T+ Sbjct: 288 RRPDTTLARELLRWQPSVDWEEGLKRTI 315 >gi|315646705|ref|ZP_07899821.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] gi|315277911|gb|EFU41234.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] Length = 305 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 24/245 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS L LVN +V VID LT G L+S + L V Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQ-GYEVHVIDNLTTGDPGRLHS---------EAILHVA 50 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + + +PD + + AA++ V RSI NI+GT +LE R Sbjct: 51 DVNSQQTTAYISVLKPDVVFHLAAQADVQRSIKEPPLDADANIMGTINILEACR------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + ST VYG L+K +ED P +P S Y+ +K + + + + +G+ Sbjct: 105 ---KAGVRKIVFASTSGVYGDLEKPQLTEDDPVSPISFYAQSKITGEQYIRLYHQFFGLK 161 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + ++ + R+ +G + +YGDG+ RD++YV+D V A Sbjct: 162 YTILRFGNVYGPGQTAKGEGGVVAVFGNRLRQGIPLQIYGDGEQTRDFIYVKDVVEANLA 221 Query: 236 VLKKG 240 + +G Sbjct: 222 SIHQG 226 >gi|153011732|ref|YP_001372946.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] gi|151563620|gb|ABS17117.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] Length = 336 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 37/331 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+N+ V+ +D + G L +L+ + + + FSF++ DI + Sbjct: 19 RILVAGGAGFLGSHLCERLLNEGNF-VICVDNFS-TGRLENLRNLLRYDTFSFVRHDIVN 76 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I N A + + T++IG+ LLE + Sbjct: 77 P-------IDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHY------- 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 Q R Q ST EVYG E + P S Y K S++ L + YG Sbjct: 123 ---QARIFQASTSEVYGDPQTHPQPEAYWGNVNSFGPRSCYDEGKRSAETLFYDFHKQYG 179 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P+ +++ I + +E + +YGDG R + YV+D + + Sbjct: 180 VDIRIVRIFNTYGPRMRPDDGRVVSNFIVQALEREDITIYGDGSQTRSFCYVDDLIEG-F 238 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 L ++ + N+G E F + L + +I + S + ++ P D R+ Sbjct: 239 SRLMSSQVQKPVNLGNPGE-------FTVRELAEQIIALTNSSSRIV--YRPLPTDDPRQ 289 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K E+GW PQ + GL +T+ ++ Sbjct: 290 RRPDIMLAKRELGWEPQIALVEGLKQTIAYF 320 >gi|15894081|ref|NP_347430.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Clostridium acetobutylicum ATCC 824] gi|15023681|gb|AAK78770.1|AE007594_7 Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Clostridium acetobutylicum ATCC 824] gi|325508208|gb|ADZ19844.1| Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Clostridium acetobutylicum EA 2018] Length = 315 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 43/338 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++TGGAGFIG+ L L+N K+ VL T LN+ K + ++ + Sbjct: 1 MHYLITGGAGFIGTNLTLRLLNAGHKVTVLDNFSATLPDRLNNTKA-------TVIKGSV 53 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + S + + D I++ AA V ++L E + + GT +LE L+ + Sbjct: 54 LDRNLVFSLVN--KCDYIIHLAAVVGVRLAMLKGIEGLKVSCTGTDNMLEAAHLYNKGI- 110 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSED------MPYNPSSPYSATKASSDYLVLAWGH 173 F+ S+ +YG + K E+ PS YS K + ++LVLA+ Sbjct: 111 --------FIS-SSSAIYGKISKKSVDEEDDSVLGTSKKPSWLYSVGKLTEEHLVLAYHR 161 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V + N GPY ++P I +E + +YG+GQ R + Y+ED + Sbjct: 162 ELGVKVKIGRFFNVIGPYQVGNYGMVVPTFINVALEEKPIQVYGNGQQTRTFGYIEDILN 221 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LVL G IGE YNIGG E + +D+ +I ++ +S S+ L+ + D Sbjct: 222 GLQLVLNYGEIGEIYNIGGTEEIRILDLAKKI-----KVLTQSNSNINLVPY---EKAFD 273 Query: 292 RRY------AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + D SK+K ++G+ P +++ L + + Sbjct: 274 KNFEETLQRVPDISKLK-KLGYTPHYSLDEALKSIIKY 310 >gi|312622609|ref|YP_004024222.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] gi|312203076|gb|ADQ46403.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] Length = 305 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 162/333 (48%), Gaps = 34/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V V+D L +GN+ ++ S+ F Q+DI Sbjct: 1 MAILVTGGAGFIGSHIVDKLI-ERGYDVCVVDNLL-SGNVCNINPKSK-----FYQLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + +E + + ++ AA+ V +S+ + + NI+GT LL+ C+ Sbjct: 53 -RDNLEKVFEENKIEYCIHQAAQVSVAKSMEDSYLDCSINILGTVNLLD------YCVKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYI 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM+ V +YGDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIYVEDVAEANCIAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KNI + +FEI L L Y + + + RPG Sbjct: 223 ESSVSG-TFNL---STGKNISVNELFEI---LSGL--TGYKKSPVYQ--SKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + ++ +KS +G+ PQ ++ GL KTV ++ + Sbjct: 272 LSNNLLKSVLGFSPQFSLLEGLKKTVECFISKS 304 >gi|295695529|ref|YP_003588767.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] gi|295411131|gb|ADG05623.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] Length = 321 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 29/323 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGFIGS + L +V V+D L S Q + + L + Sbjct: 2 VRVMVTGGAGFIGSHVVDRLCEG-GYEVAVVDDL-------STGRKEQVHPSAVLYIQSV 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + F+P+ +++ AA+S+V RSI N++GT +L + R + Sbjct: 54 DSESVAHVFEAFRPEIVIHLAAQSNVPRSIQDPLSDTRINVLGTVNVLNQCRDYGV---- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG E+ P P S Y +K + + V +G YG+ Sbjct: 110 -----RKVIYASSAAVYGHPQYLAIDEEHPVRPVSFYGISKYTPELYVRTYGELYGLDYT 164 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP P ++ + + +++ G V + GDG+ RD++YVED A L Sbjct: 165 ILRFANVYGPRQDPTGEGGVVSIFVDKLLRGEPVIINGDGEQTRDFIYVEDVAAANVAAL 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G GE NIG I L + L + + I E+R R + Sbjct: 225 TLGS-GEVLNIG-------TGCPTSINELWNTLSSLTGTAARAIHR-ENRARDIRHSCLA 275 Query: 298 SSKIKSEIGWFPQENMESGLNKT 320 ++K + + W P+ + GL +T Sbjct: 276 NAKARRLLEWEPRFALRDGLERT 298 >gi|313677868|ref|YP_004055864.1| nad-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] gi|312944566|gb|ADR23756.1| NAD-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] Length = 315 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 153/323 (47%), Gaps = 31/323 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIG L ++N Q++V+D L+ NLN LK +SF+Q +I Sbjct: 12 IVVTGGAGFIGHHLVNEILNLQPKQLIVVDDLSTGKIENLNRLK-----TEYSFIQKEIL 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S + D I + AA V S ++ N G +LE + Sbjct: 67 D---IGSDDLPLEIDFIFHLAALVSVPLSFEKSELTHQINESGFIRILELAK-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K+ + + S+ +YG ++K +ED P P SPY+ +K ++ ++ YGI + Sbjct: 116 -EKNVKKVIYASSSAIYGEVEKMPVTEDFPMQPQSPYAVSKQMNEIHARSYFEFYGIQSI 174 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YG P +I L +M + +YGDG+ +RD+++V D V AL Sbjct: 175 GFRFFNVYGDGQDPSSPYSGVISLFTDKMNRSIPISIYGDGEQIRDFVHVNDVVNALIRG 234 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +N+G N +I+ +F I + + Y + + ++E R G ++ Sbjct: 235 ALSAVQNDVFNVGSGNP-TSINELFSI-------LKEIYGYDKDANYLEKRKGDIQKSLS 286 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 SKI++++G+ P ++ SGL K Sbjct: 287 SISKIRNQLGYEPSIDLFSGLKK 309 >gi|257418263|ref|ZP_05595257.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T11] gi|257160091|gb|EEU90051.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T11] Length = 319 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 161/329 (48%), Gaps = 34/329 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y++D + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIDDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAI-DSSKIKSEIGWFPQENMESGLNK 319 +Y++ DSS +KS +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKS-LGFSPVYSIQEGLQK 308 >gi|197120652|ref|YP_002132603.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|196170501|gb|ACG71474.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] Length = 324 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 31/333 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVDI 59 +VTG AGFIG L + L+ D +VL +D + Y L L ++S F+F ++D+ Sbjct: 5 LVTGAAGFIGFHLAKALL-DRGDEVLGVDSMVPYYDVRLKEARLAQLSGRPGFTFERLDL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + A+V+ AA+ V S+ ++ N+ G +LE R Sbjct: 64 ADREATSRLFERGGFGAVVHLAAQPGVRYSLENPHAYVDANVTGFLDVLEGCR------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + S+ VYG K F+ D +P S Y+ATK +++ + + H + IP Sbjct: 117 --RHPVRHLVYASSSSVYGGNTKVPFAVADNVDHPVSLYAATKKANELMAYTYSHLFAIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 YGP+ P+ + P+ R I EG + ++ GQ RD+ YV+D V + VL Sbjct: 175 ATGLRFFTVYGPWGRPD-MAPMLFARAILEGHPIKVFNHGQMRRDFTYVDDIVEGVIRVL 233 Query: 238 KKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + YNIG + + ++++ I + +AL K+ EL+ +PG Sbjct: 234 DRPPAAGVVPPHRLYNIGNS---QPVELLRFIEVMEEALGKKAVR--ELLPM---QPGDV 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+++ ++G+ P ++E G+ + V WY Sbjct: 286 PATFADVSELERDVGFRPATSIEEGVRRFVAWY 318 >gi|196045761|ref|ZP_03112991.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] gi|228930270|ref|ZP_04093278.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|196023592|gb|EDX62269.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] gi|228829411|gb|EEM75040.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 347 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 45/363 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ +V+V+D L+ + ++N ++EI+ F F + D Sbjct: 1 MAVLVTGGAGYIGSHTCVELLNN-DYEVIVVDNLSNSSVESINRVREITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + +E +A+++FA V S+ + NII T L C Sbjct: 59 LVNYEALNKIFEENTIEAVIHFAGLKAVGESVAKPLTYYHNNIISTLTL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K++ + + S+ VYG + +E+ P + ++PY TK + ++ +A+ T Sbjct: 110 VMQKRNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQMMRDVAFADTEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG + Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYSTKDGTGI 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLNTTGV-DAYNLGTGTGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN-NWWWRPLY 335 +F E RPG D+SK K E+GW +E + W +N N + + + Sbjct: 285 ----YKFTERRPGDVAVCFADASKAKCELGWEATRGLEEMCADSWRWQSENKNGYQKLVN 340 Query: 336 KEL 338 KEL Sbjct: 341 KEL 343 >gi|15668384|ref|NP_247180.1| UDP-glucose 4-epimerase GalE [Methanocaldococcus jannaschii DSM 2661] gi|2494668|sp|Q57664|GALE_METJA RecName: Full=Putative UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1590951|gb|AAB98196.1| UDP-glucose 4-epimerase (galE) [Methanocaldococcus jannaschii DSM 2661] Length = 305 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 40/334 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ + V+++D LT GN N++ ++ F+ DI D+ Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN-NYDVIILDNLT-TGNKNNINPKAE-----FVNADIRDK 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + + +++ AA+ +V S+ N++GT +LE R + Sbjct: 55 D-LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKY-------D 106 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D+ F S VYG + E+ P NP SPY +K + + + YGI + Sbjct: 107 IDKIVFAS-SGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAIL 165 Query: 183 NCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK- 238 SN YG P+ +I + I +M++ ++GDG RD++YV D +A + L Sbjct: 166 RYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNW 225 Query: 239 KGRIGERYNIGGNNE---RKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 K I NIG E + DI+ EIGF +A+ K R G R Sbjct: 226 KNEI---VNIGTGKETSVNELFDIIKHEIGFRGEAIYDKP------------REGEVYRI 270 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D K +S +GW P+ +++ G+ + V W +NN Sbjct: 271 YLDIKKAES-LGWKPEIDLKEGIKRVVNWMKNNN 303 >gi|257415217|ref|ZP_05592211.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis AR01/DG] gi|257157045|gb|EEU87005.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ARO1/DG] gi|315146907|gb|EFT90923.1| NAD-binding domain 4 [Enterococcus faecalis TX4244] Length = 319 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S++ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVVQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPSSPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|326792872|ref|YP_004310693.1| GDP-mannose 4,6-dehydratase [Clostridium lentocellum DSM 5427] gi|326543636|gb|ADZ85495.1| GDP-mannose 4,6-dehydratase [Clostridium lentocellum DSM 5427] Length = 309 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 155/331 (46%), Gaps = 37/331 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TG GF+G ++L N+L + Y ++ + E + L+ DI Sbjct: 1 MKALITGITGFVG----KHLANELHRN----NYEVYGADIIAKDE-------NTLECDIL 45 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I++ L++ +P+ I + A +S V +S + N+ GT LLE +++ Sbjct: 46 DRVSIQNVLEQVKPNVIFHMAGQSSVAKSWSNPNLTFDLNVKGTINLLETIKMF------ 99 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ + L I + + YG ++ G+ +E++P P++PY+ +K + + L + YG+ Sbjct: 100 --DNEIQVLLIGSSDQYGKITVQDGIVNEEVPLCPATPYAVSKCAQEELGKLYHSAYGMN 157 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRALY 234 + L+ N+ G +IP + + E S G+ RD+ V+D VRA Sbjct: 158 IYLTRSFNHIGIGQSKGFVIPDVASGIAEIEKHKSDTLKIGNLAVKRDFCDVKDIVRAYR 217 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDRR 293 L+++KGR G YN+G + I L+D LI S ++ R RP Sbjct: 218 LIVEKGRSGVVYNVGSGES-------YCIQELVDKLIAMSKCTIKIERDPSRMRPSDVPC 270 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S++ EIGW P+ +E L + ++ Sbjct: 271 IQCDHSRLTQEIGWQPEIEIEKTLKDILDYF 301 >gi|307265779|ref|ZP_07547330.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919174|gb|EFN49397.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] Length = 311 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 156/327 (47%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGS + L+ + +++++D NL++ KE + F + DI Sbjct: 1 MKVLVAGGAGFIGSHIGDLLIEN-GYEIVIVD------NLSTGKEKFINKKAIFYKKDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE +PD +++ AA+ V +SI + N++GT +LE R Sbjct: 54 DDDLYEIFRKE-KPDYVIHQAAQIDVQKSIDNSVFDAKVNVLGTVNILECCR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ + E NP S Y +K ++++ + Y + Sbjct: 105 -KSGVKKIIYASSAAVYGNPEYLPIDEGHKINPISSYGISKHTAEHYFEVYSQLYDLKYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + +M++G ++GDG RD++YV+D +A L L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFTDKMLKGERPVIFGDGNQTRDFVYVKDVAKANLLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 ++G E N+ N ++V + +++ + Y+ E R G +D Sbjct: 224 ERGD-NEVVNVSTNKPTSINELVDMMNKIMNTSLEPIYT--------EPRKGDIMHSYLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K +GW P+ ++E GL +T+ +Y Sbjct: 275 NKKALDVLGWKPEYSLEDGLRETIEYY 301 >gi|319793713|ref|YP_004155353.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] gi|315596176|gb|ADU37242.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] Length = 383 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 45/347 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF--LQVDICD 61 ++TGGAGF+G+ L L+++ + +VLV D L+ G +L + Q++ + D+ D Sbjct: 26 LITGGAGFVGANLAHRLLSEGQ-RVLVFDNLSRPGVERNLAWLQQTHPHGLDVMVADVRD 84 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + A+ + D + +FAA+ V S+ E N +GT +LE R S Sbjct: 85 ADAVERAVA--RADHVFHFAAQVAVTTSLDDPREDFAVNALGTLNVLEAARAQPVPPS-- 140 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF-------------------SEDMPYNPSSPYSATKA 162 + ST++VYG LD +E P + SPY +K Sbjct: 141 ------LVMTSTNKVYGGLDDVALELDGQRYGPADADIAAHGIAETRPLDFHSPYGCSKG 194 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQN 219 ++D V + +YG+ ++ S YG F + + + R + G + L+GDG+ Sbjct: 195 TADQYVRDYARSYGLRTVVFRMSCIYGWRQFGTEDQGWVAHFLLRALAGEPITLFGDGRQ 254 Query: 220 VRDWLYVEDHVRALYLVLKKG---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD L+V+D V A +L ++G G +NIGG N+ + E+ ++ AL Sbjct: 255 VRDILFVDDLVDA-FLRARRGIDALAGRVFNIGGGP--GNVVSLLELIDMIGAL----EG 307 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 H R G R Y D+ ++ GW P + G+ + W Sbjct: 308 HRPETAHEGWRTGDQRYYVSDTRAFQAATGWRPAVDARQGVERLHGW 354 >gi|255033878|ref|YP_003084499.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] gi|254946634|gb|ACT91334.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] Length = 341 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 42/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG-NLNSLK--E 45 M+++VTG AGFIG L +ND L +L AG S+K Sbjct: 1 MKVLVTGSAGFIGFHTVNKLLSEGFDVVGLDNINDYYSPQLKYARLQEAGIEQESVKWYS 60 Query: 46 ISQSNLFS---FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 + QS L S F+++D+ D++ + S + + D ++N AA++ V SI D ++ +N+I Sbjct: 61 LVQSKLHSAYRFVRMDLEDKQQLFSLFQSEKFDYVINLAAQAGVRYSIENPDVYVQSNVI 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATK 161 G +LE R + + S+ VYG+ K FSE D P S Y+ATK Sbjct: 121 GFHYILEACRHFPPK---------HLVHASSSSVYGANAKIPFSEEDKVDTPVSLYAATK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNV 220 S++ + A+ H YGIP+ YGP+ P+ + P+ R I EG + ++ +G+ Sbjct: 172 KSNELMAHAYSHLYGIPITCLRFFTVYGPWGRPD-MAPMLFARAISEGKPIKIFNNGEME 230 Query: 221 RDWLYVEDHVRALYLVLKKG-RIGERY---NIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+ +V D V + G +Y NIG + +D + E+ L+A K Sbjct: 231 RDFTFVGDIVNGITKTTVTGFDETPKYRVLNIGNGSPVNLMDFITELEKGLEAEAQKD-- 288 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG R K++ + + P+ + G+ + W+ Sbjct: 289 ------FMPMQPGDVPRTWASQDKLQDIVNYTPEVKLTDGILEFAKWF 330 >gi|284049269|ref|YP_003399608.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] gi|283953490|gb|ADB48293.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] Length = 329 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 49/334 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L + +V D + G+++++ S+ ++ DI Sbjct: 1 MNVLVTGGAGYIGSHVVEELTAN-GYTPIVYDNFS-TGHVDAV-----SDKVQLIEGDIH 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ L E++ D +++FAA S V S++ ++ N+ GT LL+ R + Sbjct: 54 DFNFLKHILGEYEIDGVLHFAASSQVGESMVNPGKYYYNNVAGTLGLLDAMR-------E 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +Q F ST VYG D+ +EDMP P++ Y TK + ++ + H YG+ + Sbjct: 107 AGVEQLVFS--STAAVYGEPDRVPITEDMPLQPTNVYGRTKLMIEKMMEDYSHAYGLRYV 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ N G H PE LIPL I + + V ++G DG +RD++ Sbjct: 165 ALRYFNAAGASLLGNIGENHRPETHLIPLIIQAALGQRESVSIFGTDYPTPDGTCLRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDA---LIPKSYSHT 278 +V+D A L + R G YN+G N F + ++DA + ++++ Sbjct: 225 HVKDLASAHVLAMDHLRNGGGCRTYNLGTENG-------FSVREIIDAVKTVTGRNFTVK 277 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 E R R G + S KIK E+ W P+ + Sbjct: 278 EEAR----RAGDPAKLIASSEKIKKELHWEPRHS 307 >gi|69248931|ref|ZP_00604823.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] gi|257882990|ref|ZP_05662643.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,502] gi|257891427|ref|ZP_05671080.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,410] gi|258614467|ref|ZP_05712237.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecium DO] gi|293572493|ref|ZP_06683472.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E980] gi|294621002|ref|ZP_06700201.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium U0317] gi|68194341|gb|EAN08853.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium DO] gi|257818648|gb|EEV45976.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,502] gi|257827787|gb|EEV54413.1| NAD-dependent epimerase/dehydratase [Enterococcus faecium 1,231,410] gi|291599460|gb|EFF30478.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium U0317] gi|291607410|gb|EFF36753.1| VI polysaccharide biosynthesis protein VipB/tviC [Enterococcus faecium E980] Length = 315 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 153/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L +L + V+V+D L+ + ++ + + +F++ D+ ++ Sbjct: 5 LITGGAGFIGSTLANHLGEEH--VVIVVDDLS----MGKVENLDMTKNITFIEGDVAEKS 58 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +K + D I + AA + V S+ E N ++LE R + + Sbjct: 59 LMEEIMKANKFDYIFHLAAVASVADSVARPVETHRVNFESVLMILELIRKY-------QP 111 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 D R + S+ VYG E+ P +PY+ K +++ VL + H Y +P Sbjct: 112 DLKRIVFSSSAAVYGDEPTLPKKEESVIRPLTPYAVDKFAAEQYVLDYCHLYDVPGSAVR 171 Query: 184 CSNNYGPYHFPEK----LIPLAITR-----MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P +I + + R + E + L+GDG RD++Y++D ++AL Sbjct: 172 FFNVYGPNQNPNSPYSGVISILVDRYKKQIVGEATSFTLFGDGSQSRDFVYIDDVIQALL 231 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LV ++ +G+++N+G ++++ I +L + Y E+R G Sbjct: 232 LVANEEAALGKQFNVGTGKATTLLELIHAINEILGVELTLEYK--------EERSGDIHD 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLN 318 D +KI+S IG+ P+ + SG+ Sbjct: 284 SLADITKIQS-IGYQPKYGILSGMT 307 >gi|300710052|ref|YP_003735866.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] gi|299123735|gb|ADJ14074.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] Length = 296 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 138/321 (42%), Gaps = 31/321 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGS L LV D ++ VL + +S + + + + ++ D+ Sbjct: 1 MNILITGGAGFIGSHLVDALVADHEVTVL--------DDFSSGRRSNVHDSATVVEGDVR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I A + D I + AA V+RS+ + N+ T LLE R Sbjct: 53 DEQTIAEAAGDV--DVIFHEAASVSVERSVAEPEYSHAVNVDATLSLLETAR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+D R + S+ VYG E P P+SPY K S D + Y +P + Sbjct: 103 -KRDA-RCVLASSAAVYGEPASVPIPESEPLAPTSPYGIEKTSIDQYARVYNELYDLPTV 160 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP +I + + + ++GDG RD+++VED VR L + Sbjct: 161 ALRYFNVYGPRQTAGDYSGVISTFLDQARANDPITVHGDGTQTRDFVHVEDVVRVNLLAM 220 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +GE YN+G + I L A+ S +E++ E R G + Sbjct: 221 ETDHVGEAYNVGTGD-------TVTIAELARAVREVVGSDSEIVH-TEGRAGDINHSCAE 272 Query: 298 SSKIKSEIGWFPQENMESGLN 318 +K + +G+ P + GL Sbjct: 273 ITKARERLGYEPTVPLADGLG 293 >gi|162148305|ref|YP_001602766.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic aci epimerase) [Gluconacetobacter diazotrophicus PAl 5] gi|209542940|ref|YP_002275169.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|161786882|emb|CAP56465.1| putative UDP-glucuronate 5'-epimerase (UDP-glucuronic aci epimerase) [Gluconacetobacter diazotrophicus PAl 5] gi|209530617|gb|ACI50554.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 332 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 89/339 (26%), Positives = 152/339 (44%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIG-SALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV 57 MR+++TG AGFIG CR L D +V ID +T Y L + + F + Sbjct: 1 MRILMTGTAGFIGFHVACRLL--DDGHEVTGIDGITAYYDVALKRERHDRLAMRPGFTRH 58 Query: 58 DICDRECIRSA--LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + +R A +E +PD +++ AA++ V S+ +I+ NI+GT LLE + Sbjct: 59 EFMLEDAVRLAETCREARPDIVIHLAAQAGVRYSLENPGAYISANIVGTHNLLEAIKTL- 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 F+ ST VYG+ + F+ED N P S Y ATK + + + + H Sbjct: 118 --------GVRHFVLASTSSVYGASAESPFTEDQACNHPLSLYGATKKACEEIGHSHAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P+ YGP+ P+ + + ++ G + +Y + Q RD+ Y++D V AL Sbjct: 170 YGLPITACRFFTVYGPWGRPDMALFRFTSNILGGRPIDVYNNAQMERDFTYIDDVVEALC 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV-------FEIGFLLDALIPKSYSHTELIRFIEDR 287 +L G + +V +G + A I ++ T + + + Sbjct: 230 RLLPHAPAVTTPTRRGVSPVAPFRVVNVGHGQPVALGDFIGA-IERATGRTAIRHNLPMQ 288 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG R D + ++ G+ P ++ G++ V WY D Sbjct: 289 PGDVPRTWADCTILEHLTGYRPATALQDGIDAFVAWYRD 327 >gi|307824555|ref|ZP_07654780.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307734539|gb|EFO05391.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 334 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+++VTG AGFIGS+L L+ + +V+ ID L Y NL L+ + + F F++ Sbjct: 1 MKILVTGAAGFIGSSLSLKLL-ERGDEVVGIDNLNDYYDVNLKLARLERLRGYDRFKFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + + +++ AA++ V SI +I +NI+G +LE RL Sbjct: 60 LDIADRAAVDELFAREKFQRVMHLAAQAGVRYSITHPHAYIDSNIVGFINILEGCRL--- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + S+ VYG+ K FS D +P S Y+A+K +++ + + H Y Sbjct: 117 CAVE------HLAYASSSSVYGANTKMPFSIHDNVDHPVSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P+ R +IEG + ++ G + RD+ Y++D V + Sbjct: 171 KLPTTGLRFFTVYGPWGRPD-MSPIKFARNIIEGKPIDVFNYGNHRRDFTYIDDIVEGVI 229 Query: 235 LVLKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+ K +G+ YNIG NN V + F+ + K Sbjct: 230 RVIDKPAQANADWVGDNPDPGTSFAPYRLYNIGSNNP------VHLLTFI--ETLEKCLG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S + ++G+ P +E G+ V WY Sbjct: 282 KEAIKNLLPIQPGDVLDTYADVSDLVHDLGYKPATLLEDGVRSFVEWY 329 >gi|78189149|ref|YP_379487.1| capsular polysaccharide biosynthesis protein I [Chlorobium chlorochromatii CaD3] gi|78171348|gb|ABB28444.1| capsular polysaccharide biosynthesis protein I [Chlorobium chlorochromatii CaD3] Length = 337 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M ++VTG AGFIGS LC+ L+ D++T NLN SLKE + L Sbjct: 1 MNVLVTGAAGFIGSTLCKRLLERG-------DRVTGIDNLNDYYDVSLKEARLAQLQPYE 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F++ D+ DR + + + + + +VN AA++ V SI ++ +NI+G +LE Sbjct: 54 NFTFVKGDLADRAGMEALFAKGEFEGVVNLAAQAGVRYSIENPHSYVESNIVGFLHILE- 112 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 C K + S+ VYG+ + FS D +P S Y+A+K +++ + Sbjct: 113 -----GCRHHGVK---HLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y IP YGP+ P+ + L +++ + ++ G++ RD+ Y++D Sbjct: 165 TYSHLYNIPTTGLRFFTVYGPWGRPDMALFLFTDAILKNKPIKVFNYGKHRRDFTYIDDI 224 Query: 230 VRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + L YNIG + + +D + + Sbjct: 225 VEGVIRTLDHTATPNPAWSGATPDPGSSKAPWRVYNIGNSQPVELMDYI--------QAL 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T + F+ +PG D ++ ++ + PQ ++ G+ + V WY Sbjct: 277 ENELGRTAIKEFLPLQPGDVPDTYADVDQLIEDVHYKPQTSVPEGVKRFVAWY 329 >gi|332982139|ref|YP_004463580.1| NAD-dependent epimerase/dehydratase [Mahella australiensis 50-1 BON] gi|332699817|gb|AEE96758.1| NAD-dependent epimerase/dehydratase [Mahella australiensis 50-1 BON] Length = 314 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/329 (27%), Positives = 151/329 (45%), Gaps = 26/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-LFSFLQVDI 59 M +++TGGAGFIG + + L+ D V ++D L+ G+ N++ E + N L +F + DI Sbjct: 1 MNVLLTGGAGFIGRWVAKRLLEDGH-DVWILDNLS-NGSRNNIAEFAGDNHLKAFAEGDI 58 Query: 60 CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + + QP D + AA +V SI + +GTF +LE+ C Sbjct: 59 KDTKLLEDIFQ--QPFDICYHLAASINVQDSIDDPAATFHNDAVGTFNILEQ------CR 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K F + D+ S K + E P P+SPY+ K + + +VL++ + Y +P Sbjct: 111 KHHTKMVFMSTCMVYDKANASSGKAI-DEHHPTKPASPYAGAKIAGENMVLSYWYAYNLP 169 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP+ ++ + I R +E + +YGDG RD LYVED R Sbjct: 170 TTVIRPFNTYGPFQKSSGEGGVVAIFIKRDLENQTLNIYGDGTQTRDLLYVEDCAR---F 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFL-LDALIPKSYSHTELIRFIEDRPGHDRRY 294 V++ G Y+ N N +I L A+I + + I + ++ Sbjct: 227 VVQTG-----YSDKANGHIINAGTGRDISVNDLAAIICPDKKRIKHVPHIHPQ-SEIQKL 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K K + W P+ +E G+ +T W Sbjct: 281 LCDYTKAKKLLDWQPEITLEKGIERTRQW 309 >gi|46200742|ref|ZP_00207829.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 338 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 27/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV---NDLKIQVLVIDKLTYAGNLNSLKEISQS-NLFSFLQV 57 +++VTG GFIGS L LV +D++ V ++ +S EI +S ++FS Sbjct: 9 KILVTGADGFIGSHLTEALVRRGHDVRAMVCYNSFNSWGWLDHSEPEIKRSLDVFSG--- 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D +R A+K DA+++ AA + S ++ TN+ GT +L+ R Sbjct: 66 DIRDPFGVREAVKGC--DAVLHLAALIAIPFSYHSPATYVDTNVTGTLNVLQAVR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 R + ST EVYG+ +ED P SPYSA+K +D + A+ ++ Sbjct: 119 ----DLGVGRLVHTSTSEVYGTARFVPITEDHPLVGQSPYSASKIGADQMAEAFWRSFAT 174 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + N +GP +IP IT+++ G G RD+ YV D VRA + Sbjct: 175 PVTILRPFNTFGPRQSARAVIPTIITQLLAGRRKIKLGAVHPTRDFNYVADTVRAFIAAM 234 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +G GE N N E D I + + E R ++ +R + Sbjct: 235 EAEGIEGETINAASNFEISIGDTARAIARAVGCDV---EIECEEARLRPEKSEVERLWG- 290 Query: 297 DSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 D++K +GW P+ + + L +TV W+ D Sbjct: 291 DNAKAARLLGWSPRYGGGDGFDRALAETVEWFRD 324 >gi|302378476|gb|ADL32309.1| Gla [Proteus vulgaris] Length = 336 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 M+ +VTG AGFIG L + L+ + V+ ID L ++ SLKE ++Q N FSF Sbjct: 1 MKYLVTGAAGFIGFHLIKKLIQQGET-VVGIDNLNDYYDV-SLKEERLNILNQLNNFSFS 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+ DRE I S + + D +++ AA++ V S++ + +N+ G +LE Sbjct: 59 LIDLADREKIASLFETEKFDRVIHLAAQAGVRYSLINPFSYADSNLTGFLTILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG D+ FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHNNVK---HLVYASSSSVYGLNDELPFSPHDQANHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + +I + +Y +GQ RD+ YVED V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTKAIINDDPIDIYNNGQMRRDFTYVEDIVEGVA 229 Query: 235 LVLK---------KGRIG---------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + K G + YNIG + +D + + L K+ Sbjct: 230 RIADVIPAPQQDWKVSTGTPANSSAPYKVYNIGNGSPVNLMDYISALETHLGKTADKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + G+ PQ ++ G+ + V WY Sbjct: 288 ------MLPMQPGDVYTTWADTEDLFKATGYKPQTSVNEGVKQFVDWY 329 >gi|260428727|ref|ZP_05782705.1| UDP-glucuronate 5'-epimerase [Citreicella sp. SE45] gi|260420321|gb|EEX13573.1| UDP-glucuronate 5'-epimerase [Citreicella sp. SE45] Length = 334 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 36/344 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 +++VTG AGFIG LC+ L+ D +V+ +D +T Y L +E + Q+ F + Sbjct: 3 KVLVTGSAGFIGLHLCQRLIAD-GFEVIGLDAMTDYYDVTLKQRREGLLLQTPAFRAVHE 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + + PD +++ AA++ V SI ++ +NI GTF LLE R Sbjct: 62 RVETPGVLMDLFASETPDVVIHLAAQAGVRYSIEEPRSYLESNITGTFELLEAAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 L ST YG+ + +MPY + S Y+ATK +++ + + Sbjct: 117 ----AHPPQHMLLASTSSAYGA------NTEMPYRETVKADHQMSFYAATKKATENMAHS 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+P+ + YGP+ P+ + ++E + +Y G RD+ YV D V Sbjct: 167 YAHLYGLPITMFRFFTVYGPWGRPDMALFKFTKAILEDRPIDVYNHGDMRRDFTYVTDLV 226 Query: 231 RALYLVLK----KGRIGERYNIGGNNERKNIDI----VFEIGFLLDALIPKSYSHTELIR 282 A+ L++ + +GE ++ + ++I ++ +DA I + Sbjct: 227 AAIRLLIDAVPGEAPVGEMDSLSPVAPHRVVNIGNSEPVQLTDFIDA-IEAALGRKASRN 285 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D+ +K+ G+ P+ + G+ V WYLD Sbjct: 286 LMPMQPGDVPATWADAELLKALTGYRPETRVREGVQAFVDWYLD 329 >gi|206890820|ref|YP_002249313.1| CDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742758|gb|ACI21815.1| CDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 336 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 29/328 (8%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 VTGG G +GS L + L+ V ++ L K I + ++ DI D Sbjct: 17 VTGGTGLLGSWLVKKLLELKADVVCLVRDWVPQSELVLSKTIEK---VKIVRGDIRDETL 73 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + L E++ D + + AA++ V + + TNI GT+ LLE +C Sbjct: 74 LERVLGEYEIDTVFHLAAQTIVTIANRNPISTLETNIQGTWALLE------ACRRSPTVK 127 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 Q + S+D+ YG + E+ P PY +K+ +D + + +T+ +PV+++ C Sbjct: 128 QI--IIASSDKAYGEQGVLPYDENTPLQGRHPYDVSKSCADLISQMYAYTFNLPVVITRC 185 Query: 185 SNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK---- 239 N YG +++P I +++G + + DG VRD+ YVED V A ++ +K Sbjct: 186 GNLYGGGDLNWNRIVPGTIRSVLKGENPIIRSDGTLVRDYFYVEDAVLAYIMLAEKLAED 245 Query: 240 -GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RRYAI 296 GE +N ++I I L+ +EL I + ++ ++Y + Sbjct: 246 RKLTGEAFNFSNEEPLSVLEITERILRLM---------KSELKPVILNEVCYEIPKQY-L 295 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ K + +GW P +++ GL T+ WY Sbjct: 296 NAKKAREILGWKPIYSLDEGLTLTIKWY 323 >gi|300861970|ref|ZP_07108050.1| NAD-binding protein [Enterococcus faecalis TUSoD Ef11] gi|300848495|gb|EFK76252.1| NAD-binding protein [Enterococcus faecalis TUSoD Ef11] gi|315144538|gb|EFT88554.1| NAD-binding domain 4 [Enterococcus faecalis TX2141] gi|315173955|gb|EFU17972.1| NAD-binding domain 4 [Enterococcus faecalis TX1346] Length = 319 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|319650316|ref|ZP_08004460.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] gi|317397995|gb|EFV78689.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] Length = 324 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 30/326 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + L+ + +V+++D L G +++ ++ F +DIC Sbjct: 18 MKVLLTGGAGFIGSHIAEELIKE-DYEVVILDSLV-TGQEHNIPAGAR-----FYHIDIC 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +PD +++ AA+ V S++ +NIIGT LL +C+ Sbjct: 71 GN--LDPIFLAEKPDYVIHQAAQVSVSNSLIHPKLDGESNIIGTINLLN------ACVRH 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ ST +YG+ + E+ P +P S Y +K +++ + + YG+ Sbjct: 123 QTK---KFIFASTAALYGNPNYLSIDEEHPVSPISFYGLSKLNAESYIKLFSDLYGLSYT 179 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG + ++ + I R I G + +YGDG RD+++V+D +A + Sbjct: 180 ILRYSNVYGMRQDTKGEAGVVAIFIERAITGQSMNIYGDGFQTRDFVFVKDVAKANAAAI 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G E NI N + DIV E+ +L+++ + Y E+R G R + Sbjct: 240 LYGD-NEIINISNNTQTSIKDIVNELNYLVESEVMPIYH--------EEREGDIRHSCLS 290 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 + K + W P+ GL +TV + Sbjct: 291 NKKALKLLKWEPRYTFIDGLRETVAF 316 >gi|126433566|ref|YP_001069257.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS] gi|126233366|gb|ABN96766.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS] Length = 324 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 147/333 (44%), Gaps = 34/333 (10%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQ-- 56 R+++TG AGF+GS L R + ND I+V+ ID+ T Y K I ++NL + Sbjct: 3 RVLITGIAGFVGSTLGERLIANDPSIEVIGIDRYTDYYP------KSIKEANLEVLREYG 56 Query: 57 VDICDRECIRSALKEF--QPDAIVNFAAESHVDRSILGA-DEFITTNIIGTFILLEETRL 113 V I D + + + L D + + A + V RS + D ++ NI+ + LLE R Sbjct: 57 VRILDEDILEANLDNLLDGVDVVFHQAGQPGVRRSWGDSFDAYLRDNILASQRLLEAARR 116 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 S RF+ S+ VYG ++ D P P SPY TK ++++L+ + Sbjct: 117 STSLR--------RFVYASSSSVYGDAERYPTLETDTP-QPRSPYGVTKLAAEHLMGLYA 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+P L +GP P+ I R + G + ++G G+ +RD+ +V+D V A Sbjct: 168 QNFGVPTLSLRYFTVFGPRQRPDMAFTRFIARTLAGRPIEIFGSGEQIRDFTFVDDVVSA 227 Query: 233 LYLVLKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + G YNI G +I+ + +LD I L E G Sbjct: 228 NLAAATAAGVLPGTVYNISGGASVTVNEILATLEEILDGPI--------LTHRAETVAGD 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R + + IGW P ++ GL + V W Sbjct: 280 VFRTGGSNEAARRGIGWEPTVSLHEGLRRQVEW 312 >gi|227503469|ref|ZP_03933518.1| UDP-glucose 4-epimerase [Corynebacterium accolens ATCC 49725] gi|227075972|gb|EEI13935.1| UDP-glucose 4-epimerase [Corynebacterium accolens ATCC 49725] Length = 327 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 42/326 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V +ID + GN +++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSAVLVEQGHDVTIIDNFS-TGNRDAVPPAAR-----VVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ L E + +++FAA S V S+ DE+ N++ T LL R Sbjct: 54 DKAA--EVLGEGGFEGVLHFAARSLVGESVEKPDEYWQHNVVTTLRLLNAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG ++ +EDMP P++PY A+K + DY++ ++ +G+ Sbjct: 104 -NNDVKSLVFSSTAATYGEPEQVPITEDMPTQPTNPYGASKLAIDYMITSFAQAFGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIP+ + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGSIGENREIETHLIPIVLQVALGHRDKIFMFGTDWDTPDGTPVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L G YN+ G+ E ++ V E + K H Sbjct: 223 RDLADAHVLALHSNAPGTHRIYNL-GSGEGYSVKQVIE-------MCRKVTGHEIPAEIA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S KIK E+ W PQ Sbjct: 275 PRRAGDPATLIASSDKIKRELDWNPQ 300 >gi|77919068|ref|YP_356883.1| nucleoside-diphosphate sugar epimerase [Pelobacter carbinolicus DSM 2380] gi|77545151|gb|ABA88713.1| nucleoside-diphosphate-sugar epimerase [Pelobacter carbinolicus DSM 2380] Length = 336 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 55/355 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 +++VTG AGFIG L + L+ + V+ +D L ++ SLK+ + L F F++ Sbjct: 3 KILVTGAAGFIGFHLAKVLL-ERGDDVVGLDNLNDYYDV-SLKQARLAQLEGLSRFRFIK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE I +E + D +VN AA++ V S+ ++ +N++G +LE Sbjct: 61 CDLADREGIARLFREEKFDRVVNLAAQAGVRYSLKNPHAYVDSNLVGFVNILE------G 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 C D K + S+ VYG+ + MP+ +P S Y+A+K +++ + Sbjct: 115 CRHNDVK---HLVYASSSSVYGA------NTSMPFSIHHNVDHPVSLYAASKKANELMAH 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +PV YGP+ P+ + L ++EG + ++ G+ RD+ Y++D Sbjct: 166 TYAHLYRLPVTGLRFFTVYGPWGRPDMALFLFSKAILEGRPIDVFNYGKMQRDFTYIDDI 225 Query: 230 VRALYLVLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALI 271 V + L YNIG NN + + ++ + Sbjct: 226 VEGVVRTLDHTAFSNPDWSGDHPDPGTSSAPYRLYNIGNNNPVELLALI--------QTL 277 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ T + +PG D + ++G+ P ++E G+ K V WY D Sbjct: 278 EKALGKTAEKNLLPMQPGDVPATYADVDDLTRDVGFKPSTSIEDGVAKFVQWYRD 332 >gi|198283742|ref|YP_002220063.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248263|gb|ACH83856.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] Length = 341 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 38/343 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 R+++TG AGFIG L R L+ D + V ID L Y L L ++ F F + Sbjct: 12 RILITGAAGFIGFHLARRLLADGWV-VSGIDNLNDYYDPGLKRGRLAQLEGHPAFQFQPL 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE +++ DA+VN AA++ V S+ ++ +N++G +LE C Sbjct: 71 DLADREGMQTLFAGPHFDAVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLE------GC 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 +Q L S+ VYG+ ++ +S P + P S Y+ATK + + + ++ H YG Sbjct: 125 RAQGVD---HLLFASSSSVYGANNRLPYSVHDPVDHPVSLYAATKRAGELMAHSYAHLYG 181 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ +++ G + ++ GQ RD+ Y++D + + + Sbjct: 182 IPSTGLRFFTVYGPWGRPDMAYFSFTQKILAGHPIPVFNHGQMQRDYTYIDDIIEGVARL 241 Query: 237 LKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 + + + NIG + D + +L+ + KS I Sbjct: 242 IPRAPEAQDIWPEDPASSAAPFCIQNIGNHTPVALTDFI----RILEECLGKSAQ----I 293 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + G D + ++ +G+ P + +GL + V WY Sbjct: 294 EWLPMQDGDVVATYADVTALQQSVGFAPNTPLRTGLQRFVTWY 336 >gi|187779689|ref|ZP_02996162.1| hypothetical protein CLOSPO_03285 [Clostridium sporogenes ATCC 15579] gi|187773314|gb|EDU37116.1| hypothetical protein CLOSPO_03285 [Clostridium sporogenes ATCC 15579] Length = 728 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 33/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGG GFIGS + + +V +ID ++ +G L ++ + F + D+ Sbjct: 1 MRVLVTGGYGFIGSHVVERFAKE-GYEVFIIDNMS-SGKLENV-----NCKHKFYEFDVE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI--TTNIIGTFILLEETRLWWSCL 118 D+ C K D +V+ AA+ +V S+ D F+ TNI+G +LE L Sbjct: 54 DKRC-EFVFKNNNFDIVVHLAAQINVITSL--EDPFLDTKTNILGLVNMLE--------L 102 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S K + +F+ S+ +YG+ + +E P SPY +K + W Y + Sbjct: 103 STKYKVK-KFIFASSAAIYGNNENIPLTEKEIAEPLSPYGISKYVGEGYCKKWNEIYSLD 161 Query: 179 VLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + SN YGP ++ + + + + + L GDG+ RD++YV D AL+ Sbjct: 162 TICFRFSNVYGPRQGIIGEGGVVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFK 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + YN+ N R +++ + +I L+ L + EDR G + + Sbjct: 222 AAESNISFGVYNLS-TNSRSSLNNLIKI---LNNLKKIKGIIKK-----EDRKGDIKHSS 272 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +D++KIK +GW P ++E G+ T WY N Sbjct: 273 LDNTKIKKALGWIPMVSLEQGIKNTFDWYSTN 304 >gi|95929386|ref|ZP_01312129.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM 684] gi|95134502|gb|EAT16158.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM 684] Length = 343 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 159/341 (46%), Gaps = 29/341 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ + +V+ +D + Y L + L +++ F+FL+ Sbjct: 1 MKYLVTGTAGFIGLHVSLRLLREGH-EVVGLDNMNSYYDPALKTYRLAQLNPYERFTFLE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + D +++ AA++ V S+ +++ +N++G +LE R Sbjct: 60 LDLTDRQGIAELFRGEHFDRVIHLAAQAGVRHSLKAPFDYVDSNLVGMMTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F S+ VYG FSE D P S Y+ATK S + + ++ H Y Sbjct: 116 ---HQQVEHLVF--ASSSSVYGMNSTIPFSETDSVDYPVSLYAATKKSCELMAHSYAHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV YGP P+ L ++ + ++ G+ RD+ Y++D V + Sbjct: 171 GLPVTGLRFFTVYGPGGRPDMAPWLFTEAIVNDQPIKVFNHGEMARDFTYIDDVVECVAR 230 Query: 236 V---------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 + ++G Y I + +++ I A I +S T +++ Sbjct: 231 LQNVIPGWQRQEEGTARAPYKIYNVGNHQPVELKRFI-----AAIEQSCGKTAEKIYLDM 285 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +PG + D+S++ + I + PQ ++E G+ V WY D+ Sbjct: 286 QPGDVLKTYADTSRLNAVISYAPQRSIEQGVEHFVRWYQDS 326 >gi|257083577|ref|ZP_05577938.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Fly1] gi|256991607|gb|EEU78909.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Fly1] Length = 319 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGQVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LDLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|222150906|ref|YP_002560059.1| NAD dependent epimerase/dehydratase family protein homolog [Macrococcus caseolyticus JCSC5402] gi|222120028|dbj|BAH17363.1| NAD dependent epimerase/dehydratase family protein homolog [Macrococcus caseolyticus JCSC5402] Length = 314 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 28/323 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M+ ++TGGAGFIGS + LVN+ +V ++D LT G ++++ I + ++ + DI Sbjct: 1 MKFLITGGAGFIGSNIAEKLVNNGN-EVHILDNLT-TGKISNVTFIKEE----YIHIEDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + IR+ L + + D I++ AA V +I E TNI T LLE + + L Sbjct: 55 RNYDFIRNLLIKHKFDYIIHLAAMVSVVETIDKPLESNQTNIDATINLLETIKSYNPELK 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F+ S+ +YG L S + P P SPY+ K + + + Y IP Sbjct: 115 -------KFIFASSAALYGDLPGLPKSTEDPLKPLSPYAIQKFAGESYAKIYNDLYDIPT 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAIT---RMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYL 235 N YGP PE I+ + E F + GDG RD++Y++D V A+ L Sbjct: 168 TSFRFFNVYGPKQNPESDYSGVISILNKKFESKSTFTFLGDGHQTRDFVYIDDLVSAVML 227 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L + G+ YN+G NE +++ S+S+ + F R G D +Y Sbjct: 228 ILDNDQTNGKVYNLGTGNETSLLEVY--------NAFKNSFSYEIPVEFKNSRKG-DIKY 278 Query: 295 AIDSSKIKSEIGWFPQENMESGL 317 ++ E+G+ + ++ G+ Sbjct: 279 SVAEITPLKELGYSAKYSIIDGI 301 >gi|159042020|ref|YP_001541272.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920855|gb|ABW02282.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 301 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 26/319 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ +TGGAGFIG YL + ++V+V+D L + +++ + + + S ++ D+ Sbjct: 1 MRVPITGGAGFIGHNTAIYL-RERGVEVVVLDSLERSTEY-AVRRLRDAGV-SIIRGDVG 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + D +++ AA V S+ +++ N++GT ++ E CL Sbjct: 58 DSSTVGPLVGD--SDVVIHAAAYIDVHESMQRPADYVRNNVVGTTVVAHE------CLRH 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F IS+ VYG+ + ED P P SPY +K S+ +V +G G+ + Sbjct: 110 GKPMVF----ISSAAVYGNPVRLPIPEDHPLRPISPYGLSKVLSEEVVRFFG-GLGLRFV 164 Query: 181 LSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +I I R+ G +YGDG RD+++V D R + V+ Sbjct: 165 ILRPFNVYGPGQNSAYAGVIMRFIERVKRGLPPVIYGDGNQARDFIHVLDVARVIERVIT 224 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 GE +N+G + ID L L+ + F + RPG R D Sbjct: 225 GDYWGETFNVGTGVPTRIID--------LARLVMGLFGMDGEPLFDKPRPGDIRDSYADI 276 Query: 299 SKIKSEIGWFPQENMESGL 317 SK +S +G+ P ++E GL Sbjct: 277 SKARSILGFTPSISLEDGL 295 >gi|296330056|ref|ZP_06872539.1| putative UDP-glucose epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675671|ref|YP_003867343.1| putative UDP-glucose epimerase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152781|gb|EFG93647.1| putative UDP-glucose epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413915|gb|ADM39034.1| putative UDP-glucose epimerase [Bacillus subtilis subsp. spizizenii str. W23] Length = 316 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 31/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS LC L+ D V+ ID ++ +L+ + F+F++ Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKTHDVIGIDDFIGPTPFSLKFKNLEALLPEKRFTFIK 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF---ITTNIIGTFILLEETRL 113 ++ + S L E D I + AA V RS G D F NI LLE R Sbjct: 61 ENLLTADL--SPLLE-GVDIIFHLAAIPGV-RSSWG-DHFHPYAAHNIQALQRLLEACR- 114 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + F F ST VYG +G SE+ +P SPY TK + + L + Sbjct: 115 ------EHPIQTFVF--ASTSSVYGE-KQGRVSENATLSPLSPYGVTKLTGEKLCHVYQQ 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++GIP+++ YGP P+ I + ++ + ++G+GQ RD+ Y+ D V+ + Sbjct: 166 SFGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGNGQQSRDFTYIGDCVKGI 225 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 VL K IGE NIGG+ + +V +LI + F + G Sbjct: 226 NAVLGKPHLIGETVNIGGSERASVLKVV--------SLIEDISGKKATLHFSDKIVGEPS 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + D SK K + + P +++ GL + + Sbjct: 278 KTWADISKAKQLLHYNPATSLKDGLANELAY 308 >gi|289641120|ref|ZP_06473288.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289509061|gb|EFD29992.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 321 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 33/339 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+++ V + + +T G ++ ++ F ++ D+ D Sbjct: 3 RSVVTGGAGFLGSHLCERLLDEGHAVVCLDNFIT--GTPANVAHLTGHEHFRLVRCDVTD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I ++ D +++FA+ + + + IGT L Sbjct: 61 YVHIAGSV-----DYVLHFASPASPIDYLNLPIHTLKVGSIGTL----------HALGLA 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + RF+ ST EVYG SED P P Y K + L +A+ ++G Sbjct: 106 KEKRARFVLASTSEVYGDPQIHPQSEDYWGHVNPVGPRGVYDEAKRFGEALTMAYRRSHG 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N +GP P + IP T+ + G + + GDG R +YV+D V + Sbjct: 166 VDAGIIRIFNTHGPRMRPNDGRAIPTFATQALRGEPITVAGDGSQTRSIIYVDDLVEGIV 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G G NIG +E + E+ L+ ++ KS S + ED P Sbjct: 226 RMTFSGHPGP-MNIGNPHELP----ILELAQLVREVV-KSESPITFVPRPEDDP---TVR 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 D S + +GW P ++ SGL+ TV W+ ++ RP Sbjct: 277 QPDISLARRILGWEPAVDLRSGLDSTVSWFREHPDVARP 315 >gi|218665304|ref|YP_002426373.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517517|gb|ACK78103.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 333 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 38/343 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 R+++TG AGFIG L R L+ D + V ID L Y L L ++ F F + Sbjct: 4 RILITGAAGFIGFHLARRLLADGWV-VSGIDNLNDYYDPGLKRGRLAQLEGHPAFQFQPL 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE +++ DA+VN AA++ V S+ ++ +N++G +LE C Sbjct: 63 DLADREGMQTLFAGPHFDAVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLE------GC 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 +Q L S+ VYG+ ++ +S P + P S Y+ATK + + + ++ H YG Sbjct: 117 RAQGVD---HLLFASSSSVYGANNRLPYSVHDPVDHPVSLYAATKRAGELMAHSYAHLYG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ +++ G + ++ GQ RD+ Y++D + + + Sbjct: 174 IPSTGLRFFTVYGPWGRPDMAYFSFTQKILAGHPIPVFNHGQMQRDYTYIDDIIEGVARL 233 Query: 237 LKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 + + + NIG + D + +L+ + KS I Sbjct: 234 IPRAPEAQDIWPEDPASSAAPFCIQNIGNHTPVALTDFI----RILEECLGKSAQ----I 285 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + G D + ++ +G+ P + +GL + V WY Sbjct: 286 EWLPMQDGDVVATYADVTALQQSVGFAPNTPLRTGLQRFVTWY 328 >gi|255971106|ref|ZP_05421692.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T1] gi|255962124|gb|EET94600.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T1] Length = 319 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTKQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|126667506|ref|ZP_01738477.1| Nucleoside-diphosphate-sugar epimerase [Marinobacter sp. ELB17] gi|126628098|gb|EAZ98724.1| Nucleoside-diphosphate-sugar epimerase [Marinobacter sp. ELB17] Length = 335 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIG L + L+ D +V+ +D L ++N LKE + L F+ + Sbjct: 1 MKILVTGSAGFIGFHLAQRLL-DRGDEVIGVDNLNDYYDVN-LKEARLARLTGKAGFTEV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI DR+ + + +E +P+ +V+ AA++ V SI ++ N++G +LE R Sbjct: 59 RQDIADRDLMAALFEEHKPERVVHLAAQAGVRYSIENPQAYVDANLVGFMNILEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 + D + S+ VYG+ + FS D +P S Y+A+K +++ + + H Sbjct: 116 ------RNDVQHLVYASSSSVYGANEAMPFSVHDNVDHPLSLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + +++ G + ++ G + RD+ Y++D V + Sbjct: 170 YNLPTTGLRFFTVYGPWGRPDMAPFIFTKKILAGEPIDVFNHGHHKRDFTYIDDIVEGVV 229 Query: 235 LVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L + R R YNIG NN E+ ++ + + Sbjct: 230 RTLDQVAQPNPQWSAAQPDPSTSRGPYRIYNIGSNNP-------VELARFIETIEQCTGK 282 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + +PG + + +++G+ P+ +E G+ + V WY D Sbjct: 283 KAEK-NLLPMQPGDVVATYANVDGLINDVGYKPETQLEQGIEQFVQWYRD 331 >gi|87300564|ref|ZP_01083406.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 5701] gi|87284435|gb|EAQ76387.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 5701] Length = 339 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 47/353 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----------TYAGNLNSLKEISQSNLF 52 ++VTG AGF+G+A+ L+ + +V+ +D L L + Q F Sbjct: 1 MLVTGAAGFVGAAVTEALLRRGE-RVVGLDNLNAYYDPALKRARLSRLQCMPAPDQGGGF 59 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F Q+D+ D + + +P A+++ AA++ V SI +I +N++G +LE R Sbjct: 60 RFRQLDLEDGSAMAELFESERPRAVIHLAAQAGVRYSIENPSAYIHSNLVGFGNILEGCR 119 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 + S+ VYG + FSE P N P S Y+ATK +++ + + Sbjct: 120 ---------HHGVEHLVYASSSSVYGGNRRMPFSEQHPVNHPVSLYAATKKANELMAHTY 170 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H YG+P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V Sbjct: 171 SHLYGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGEPIRVFNHGRMERDFTYIDDIVE 230 Query: 232 ALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + L K + +NI GN++ + E+ L DAL K Sbjct: 231 GVIRCLDKPATPDPSFDPLDPNPATAAAPHRLFNI-GNSQPTPLLRFIEV--LEDALGVK 287 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +F +PG A D+S +++ +G+ P +E G+ WY D Sbjct: 288 A-----IPQFEPMQPGDVAATAADTSALEAWVGFAPHTPLEVGIGHFARWYRD 335 >gi|306836283|ref|ZP_07469265.1| UDP-glucose 4-epimerase [Corynebacterium accolens ATCC 49726] gi|304567875|gb|EFM43458.1| UDP-glucose 4-epimerase [Corynebacterium accolens ATCC 49726] Length = 327 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 42/326 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V +ID + GN +++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSAVLVEQGHDVTIIDNFS-TGNRDAVPSSAR-----VVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ L E + +++FAA S V S+ DE+ N++ T LL R Sbjct: 54 DKAA--EVLGEGGFEGVLHFAARSLVGESVEKPDEYWQHNVVTTLRLLNAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG ++ +EDMP P++PY A+K + DY++ ++ +G+ Sbjct: 104 -NNDVKSLVFSSTAATYGEPEQVPITEDMPTQPTNPYGASKLAIDYMITSFAQAFGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIP+ + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGSIGENREIETHLIPIVLQVALGHRDKIFMFGTDWDTPDGTPVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L G YN+ G+ E ++ V E + K H Sbjct: 223 RDLADAHVLALHSNAPGTHRIYNL-GSGEGYSVKQVIE-------MCRKVTGHEIPAEIA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S KIK E+ W PQ Sbjct: 275 PRRAGDPATLIASSDKIKRELDWNPQ 300 >gi|296331822|ref|ZP_06874287.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673434|ref|YP_003865106.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150900|gb|EFG91784.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411678|gb|ADM36797.1| putative CDP-sugar-dehydratase/epimerase [Bacillus subtilis subsp. spizizenii str. W23] Length = 300 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 17/269 (6%) Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I AL E++ D + + AA++ V + NI+GT W+ L Sbjct: 42 DLPVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGT----------WNILEA 91 Query: 121 DKKDQF--RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K R + S+D+ YG + + E+MP PY +K+ +D + + HTYG+P Sbjct: 92 CRKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLP 151 Query: 179 VLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 V ++ C N YG ++IP I ++ G + DG VRD+ Y+ED V+A L+ Sbjct: 152 VCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLA 211 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +K E N+ G + +I + L++ ++ K S + + + + + Sbjct: 212 EK---MEENNLAGEAFNFSNEIQLTVLELVEKILKKMNSDLK-PKVLNQGSNEIKHQYLS 267 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + K + + W P ++ GL KT+ WY + Sbjct: 268 AEKARRLLNWTPAYTIDEGLEKTIEWYTE 296 >gi|120554607|ref|YP_958958.1| NAD-dependent epimerase/dehydratase [Marinobacter aquaeolei VT8] gi|120324456|gb|ABM18771.1| NAD-dependent epimerase/dehydratase [Marinobacter aquaeolei VT8] Length = 335 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 87/353 (24%), Positives = 161/353 (45%), Gaps = 49/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIGS L L+ D +V+ +D + ++N LKE + L F+ + Sbjct: 1 MKILVTGTAGFIGSHLAHRLL-DRGDEVIGVDNVNDYYDVN-LKEARLARLLNKPGFTEV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ DRE + + +E +P+ +V+ AA++ V S+ ++ N++G +LE Sbjct: 59 RQDVADREAMEAVFREHKPERVVHLAAQAGVRYSLENPHAYVDANLVGFMNILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG+ + FS D +P S Y+A+K +++ + + H Sbjct: 113 GCRHNEVK---HLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + + +++ G + ++ G + RD+ Y++D V + Sbjct: 170 YNLPTTGLRFFTVYGPWGRPDMALFIFTKKILAGEPIDVFNHGHHKRDFTYIDDIVEGVI 229 Query: 235 LVL-------------------KKG--RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 L KG RI YNIG NN E+ ++ +I + Sbjct: 230 RTLDNVAQPNQDWSGAQPDPGTSKGPYRI---YNIGSNNP-------VELSRFIE-IIEE 278 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + + +++G+ P +E G+ V WY D Sbjct: 279 RVGKKAEKNLLPLQPGDVPATYANVDDLINDVGYKPSTTVEEGIANFVDWYRD 331 >gi|288926382|ref|ZP_06420304.1| capsular polysaccharide biosynthesis protein [Prevotella buccae D17] gi|315608717|ref|ZP_07883695.1| NAD-dependent epimerase/dehydratase [Prevotella buccae ATCC 33574] gi|288336835|gb|EFC75199.1| capsular polysaccharide biosynthesis protein [Prevotella buccae D17] gi|315249567|gb|EFU29578.1| NAD-dependent epimerase/dehydratase [Prevotella buccae ATCC 33574] Length = 350 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 96/366 (26%), Positives = 166/366 (45%), Gaps = 60/366 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNL- 51 M+++VTG AGFIGS L + +V+ ID +L Y G L+ L I Sbjct: 1 MKILVTGAAGFIGSKTAMMLA-ERGDEVIGIDNVNEYYDVRLKY-GRLSHLLGICHDTGE 58 Query: 52 ------------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGA 93 F FL++ I DR + + E + D ++N AA++ V SI Sbjct: 59 PYTDLPFGVYYHSRRFPNFKFLRMGIDDRTAMENLFNEEKFDKVMNLAAQAGVRYSIQNP 118 Query: 94 DEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPY 151 ++ +N++G +LE R + R+L S+ VYG K FSE D Sbjct: 119 YSYMNSNMVGFMNVLECCRNY----------HVRYLVFASSSSVYGLNTKVPFSETDSVG 168 Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSH 210 P S Y+A+K +++ + A+ YG+ YGP+ P+ + P+ T++I GS Sbjct: 169 TPVSLYAASKRANELMAHAYCKLYGLKATGLRYFTVYGPWGRPD-MAPIKFTKLIMSGSS 227 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVF 261 + +Y +G RD+ Y++D V V+ K + E YNIG ++ K +D + Sbjct: 228 IDVYNNGNLSRDFTYIDDIVNGTLQVIDKEPVAEACPNGIPFTLYNIGCSHPVKLMDFIN 287 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 EI + K+ F+ +PG + D++++++E+G+ P ++ G+ Sbjct: 288 EIEQAIGIEARKN--------FLPMQPGDVYQTYADTTRLETEVGYKPSVSLHKGIGLLA 339 Query: 322 CWYLDN 327 WY+ + Sbjct: 340 EWYMSD 345 >gi|212218326|ref|YP_002305113.1| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii CbuK_Q154] gi|212012588|gb|ACJ19968.1| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii CbuK_Q154] Length = 339 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 119 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLF 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 176 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 235 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN D + A++ K+ + Sbjct: 236 TLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTDFI--------AILEKTLNK 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 288 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 335 >gi|169826742|ref|YP_001696900.1| dTDP-glucose 4,6-dehydratase [Lysinibacillus sphaericus C3-41] gi|168991230|gb|ACA38770.1| dTDP-glucose 4,6-dehydratase [Lysinibacillus sphaericus C3-41] Length = 334 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 29/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQV-- 57 +++VTG GFIGS L LV Q + Y + NS + QS+ + S L V Sbjct: 5 KILVTGADGFIGSHLTETLVR----QGYDVRAFVYYNSFNSWGWLDQSSSEIKSSLDVFS 60 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D ++ A+K ++N AA + S ++ TN+ GT +++ + Sbjct: 61 GDIRDPYGVKEAMKGCT--HVLNLAALIAIPYSYHSPATYVDTNVTGTLNVVQAAK---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +K + ST EVYG+ E+ P SPYSA+K +D + L++ ++ Sbjct: 115 ELGIEK-----VVHTSTSEVYGTALYVPIDEEHPLQGQSPYSASKIGADQMALSFYRSFD 169 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP +IP I+++ G G RD+ YV+D V V Sbjct: 170 TPVSVVRPFNTYGPRQSARAVIPTIISQLASGIKNIKLGAVSPTRDFNYVKDTVNGFISV 229 Query: 237 LKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ IGE NIG N E I I + D + T+ R ++ +R +A Sbjct: 230 MESTNSIGEVINIGSNYE---ISIGETAQMIADIMGVDLTIETDEHRLRPEKSEVERLWA 286 Query: 296 IDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 ++ K K +GW PQ E GL +T+ W+ + Sbjct: 287 -ENKKAKELLGWEPQYGGKEGFHRGLEETIEWFTN 320 >gi|229112672|ref|ZP_04242208.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-15] gi|228670804|gb|EEL26112.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-15] Length = 330 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 155/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAIMEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------LMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+M NP++ Y TK + + ++ + + Sbjct: 110 VDKFIF--SSTAATYGEVDVDLITEEMMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSKKAKEKLGWDPK 306 >gi|255973718|ref|ZP_05424304.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T2] gi|257086002|ref|ZP_05580363.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis D6] gi|307278264|ref|ZP_07559343.1| NAD-binding domain 4 [Enterococcus faecalis TX0860] gi|255966590|gb|EET97212.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T2] gi|256994032|gb|EEU81334.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis D6] gi|306505015|gb|EFM74206.1| NAD-binding domain 4 [Enterococcus faecalis TX0860] gi|315025646|gb|EFT37578.1| NAD-binding domain 4 [Enterococcus faecalis TX2137] Length = 319 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|227355782|ref|ZP_03840175.1| nucleotide sugar epimerase [Proteus mirabilis ATCC 29906] gi|227164101|gb|EEI48998.1| nucleotide sugar epimerase [Proteus mirabilis ATCC 29906] Length = 335 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 152/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ ++ V+ ID L Y L L +++Q + F F + Sbjct: 1 MKILVTGAAGFIGYHLSQRLI-EMSYHVVGIDNLNDYYDVRLKEARLAKLNQLDNFQFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D I + + D +++ AA+ V SI +I NI+G +LE R Sbjct: 60 IDITDSVSIAQLFADHRFDRVIHLAAQPGVRYSIENPMAYIDANIVGHINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG K FS ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HHNVGHLIYSSSSSVYGLNQKQPFSTEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y G RD+ YV+D V ++ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAMLAGEPIDVYNGGNMTRDFTYVDDIVSSVVR 230 Query: 236 VL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ ++G YN+G K +D + I KS + Sbjct: 231 LINIIPEPNPNWTVEQGETSSSSAPYKIYNVGNGQPTKLMDFI--------TAIEKSLNI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G D S + G+ P +E G+ + V WY+D Sbjct: 283 KAKLNLMPMQDGDVLSTCADCSDLAQTTGFSPNTAVEYGVKQFVDWYVD 331 >gi|312142464|ref|YP_003993910.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] gi|311903115|gb|ADQ13556.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] Length = 337 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/344 (24%), Positives = 160/344 (46%), Gaps = 41/344 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVDI 59 +VTG AGFIG + L+ + + QV+ +D L Y+ L + L + + + F F++ D+ Sbjct: 6 LVTGAAGFIGFHTSKKLLEEGQ-QVIGLDNLNDYYSVQLKKDRLAILKEYDNFIFIKGDL 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + + +++P+ ++N AA++ V S+ +I +N++G +LE R Sbjct: 65 ENNKLVANTFAKYKPEIVINLAAQAGVRYSLKNPHSYIDSNLVGFMNILEGCR------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + S+ VYGS +K FS D +P S Y+ATK S++ + ++ H Y +P Sbjct: 118 --HHDVEHLIFASSSSVYGSNEKVPFSTTDNVDHPVSLYAATKKSNELMAHSYSHLYDLP 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 V YGP+ P+ + + M++G + ++ G RD+ YV+D V+ +Y + Sbjct: 176 VTGLRFFTVYGPWGRPDMALFIFAENMLKGKPIQVFNHGDMKRDFTYVDDVVKGIYKLTS 235 Query: 238 -----------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 K G YNIG N+ +D + I L K + + Sbjct: 236 LPAQPDNSWNGKDPNPGTSKAPYRIYNIGNNSPVNLMDFIECIEDELGIEAEKEFKPMQ- 294 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG + D + ++G+ P+ +++G+ + + WY Sbjct: 295 -------PGDVKMTYADVKDLIEDVGYKPETPLKTGVKRFIDWY 331 >gi|84502180|ref|ZP_01000328.1| NAD-dependent epimerase/dehydratase [Oceanicola batsensis HTCC2597] gi|84389540|gb|EAQ02259.1| NAD-dependent epimerase/dehydratase [Oceanicola batsensis HTCC2597] Length = 661 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 46/352 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQVDIC 60 ++VTGGAGFIGS L + + + V+V+D L+ G +L +S +L VD+ Sbjct: 318 VVVTGGAGFIGSNLTESFLQEGR-DVVVLDNLSRPGVEENLAWLSARHGDLVHPAPVDLR 376 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++K+ A+ + AA++ V S+ + N GT LLE R Sbjct: 377 DSQALSDSVKDAS--AVFHLAAQTAVTSSLDAPVDDFDINARGTLNLLEAVRA------- 427 Query: 121 DKKDQFRFLQISTDEVYGSLDK------------------GLFSEDMPYNPSSPYSATKA 162 + + L ST++VYG+L E P + +PY +K Sbjct: 428 -TEREVPVLFASTNKVYGALADLEVRDRDEVVVPAEQRHLAGVDETRPLDFCTPYGCSKG 486 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQN 219 +D VL + +YG+ + S YGP F + + + ++G + +YG G+ Sbjct: 487 VADQYVLDYARSYGLKAAVLRMSCVYGPRQFGTEDQGWVAHFLISALKGEPITIYGSGRQ 546 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD L V D V A V RIG+ +N+GG E + +L+ IP+ Sbjct: 547 VRDLLEVSDAVAAYRQV--HARIGDLSGHAFNLGGGAEN-----AVSLRQVLNE-IPRLT 598 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 T +R R G + D+S + + GW + GL + W +N Sbjct: 599 GITPEVRHGPWRQGDQPWFVADTSALTAATGWHARTGWRDGLTRLASWLSEN 650 >gi|229083134|ref|ZP_04215521.1| NDP-sugar epimerase [Bacillus cereus Rock4-2] gi|228700171|gb|EEL52770.1| NDP-sugar epimerase [Bacillus cereus Rock4-2] Length = 302 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 30/311 (9%) Query: 16 LCRYLVNDLKIQVLVIDKL---TYAG-NLNSLKEISQSNLFSFLQVDICDRECIRSALKE 71 +C+ L+ + V+ ID T A +++++ + ++ F F+Q DI + + + L++ Sbjct: 1 MCQALLKNSAYHVVGIDHFIGPTPATLKIDNIQSLKLNSRFQFIQEDILNTD-LPKLLQD 59 Query: 72 FQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFL 129 D + + AA V R+ G D +++ NI+ T LLE + + DK F+ Sbjct: 60 I--DVVYHLAAIPGV-RTSWGKDFQPYVSNNIMVTQQLLEACK----HIQLDK-----FI 107 Query: 130 QISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYG 189 IST VYG G SED+ P SPY TK S ++L + + IP+++ YG Sbjct: 108 HISTSSVYGE-KSGAVSEDLLPTPLSPYGVTKLSGEHLCHVYHKNFHIPIVILRYFTVYG 166 Query: 190 PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL--KKGRIGERYN 247 P P+ I +++ + ++GDG RD+ Y++D +R L KK +GE N Sbjct: 167 PRQRPDMAFHRLIKQLLVDKPLTIFGDGTQTRDFTYIDDCIRGTVAALETKKNIVGEVIN 226 Query: 248 IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 IGG + +DI+ +L+ + KS S +F++ PG ++ D SK + + + Sbjct: 227 IGGKEQASILDII----SMLEKISGKSASK----KFLKSVPGEPKQTWADISKASTLLQY 278 Query: 308 FPQENMESGLN 318 P ++ GL Sbjct: 279 SPTVSLSDGLK 289 >gi|269121691|ref|YP_003309868.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] gi|268615569|gb|ACZ09937.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] Length = 342 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 154/353 (43%), Gaps = 50/353 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT---------------------------Y 36 +VTGGAGFIGS L L+ + +V+ ID Sbjct: 5 LVTGGAGFIGSHLVEKLLKNGN-KVINIDNFNEFYNYNIKVKNVLDSTGKIQKNDDGEIK 63 Query: 37 AGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF 96 L LK++ S + VDI + E + + + D +++ AA + V SI + Sbjct: 64 VNELQDLKKLVDSENYILEIVDITNMEILEEIFQRNEIDTVIHLAAMAGVRPSIEKPLLY 123 Query: 97 ITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSS 155 NI GT +LE +K + +F+ S+ VYG+ +K FSE D S Sbjct: 124 EKVNIRGTMNILELI---------NKYNIKKFICASSSSVYGNNEKVPFSEKDNVDRAIS 174 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 PY+ATK S + + ++ H Y I ++ YGP P+ I +IE + YG Sbjct: 175 PYAATKKSCEIIGHSYHHLYDIDTIMLRFFTVYGPRQRPDLAIHKFTKAIIEEKEIPFYG 234 Query: 216 DGQNVRDWLYVEDHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG RD+ Y++D + +++ + K I E N+G E + I + + L + + Sbjct: 235 DGTTQRDYTYIDDIIDGVLKSIIYLEKNKNIYEIINLG---ESETISLRKMVKTLENEIG 291 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ +++ + +PG R D SK K IG+ P+ E G+ K V WY Sbjct: 292 KKA-----VLKKLSMQPGDVNRTFADISKAKELIGYDPKTKFEEGIKKFVNWY 339 >gi|229546472|ref|ZP_04435197.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] gi|229548587|ref|ZP_04437312.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] gi|256854494|ref|ZP_05559858.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T8] gi|257089075|ref|ZP_05583436.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis CH188] gi|257420905|ref|ZP_05597895.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis X98] gi|307277069|ref|ZP_07558174.1| NAD-binding domain 4 [Enterococcus faecalis TX2134] gi|307289914|ref|ZP_07569844.1| NAD-binding domain 4 [Enterococcus faecalis TX0411] gi|312904336|ref|ZP_07763498.1| NAD-binding domain 4 [Enterococcus faecalis TX0635] gi|229306218|gb|EEN72214.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] gi|229308372|gb|EEN74359.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] gi|256710054|gb|EEU25098.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis T8] gi|256997887|gb|EEU84407.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis CH188] gi|257162729|gb|EEU92689.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis X98] gi|306499055|gb|EFM68543.1| NAD-binding domain 4 [Enterococcus faecalis TX0411] gi|306506240|gb|EFM75405.1| NAD-binding domain 4 [Enterococcus faecalis TX2134] gi|310632432|gb|EFQ15715.1| NAD-binding domain 4 [Enterococcus faecalis TX0635] gi|315030544|gb|EFT42476.1| NAD-binding domain 4 [Enterococcus faecalis TX4000] gi|315156707|gb|EFU00724.1| NAD-binding domain 4 [Enterococcus faecalis TX0043] gi|315159738|gb|EFU03755.1| NAD-binding domain 4 [Enterococcus faecalis TX0312] gi|315162710|gb|EFU06727.1| NAD-binding domain 4 [Enterococcus faecalis TX0645] gi|315578777|gb|EFU90968.1| NAD-binding domain 4 [Enterococcus faecalis TX0630] gi|323479827|gb|ADX79266.1| NAD dependent epimerase/dehydratase family protein [Enterococcus faecalis 62] gi|327534231|gb|AEA93065.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis OG1RF] Length = 319 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LDLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|55980560|ref|YP_143857.1| UDP-glucose 4-epimerase [Thermus thermophilus HB8] gi|146387343|pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad gi|146387344|pdb|2P5U|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad gi|146387345|pdb|2P5U|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad gi|146387346|pdb|2P5U|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad gi|146387347|pdb|2P5Y|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad gi|55771973|dbj|BAD70414.1| UDP-glucose 4-epimerase [Thermus thermophilus HB8] Length = 311 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 41/333 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 MR++VTGGAGFIGS ++V DL ++V V+D L N K + F +V Sbjct: 1 MRVLVTGGAGFIGS----HIVEDLLARGLEVAVLDNLATGKRENVPKGVP------FFRV 50 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D+E + A +EF+P + + AA++ V S+ ++ + L Sbjct: 51 DLRDKEGVERAFREFRPTHVSHQAAQASVKVSV-------EDPVLDFEVNLLGGLNLLEA 103 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYG 176 Q ++ F + +YG + +G +E+ P P SPY+A+KA+ ++ + +G +YG Sbjct: 104 CRQYGVEKLVFAS-TGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYG 162 Query: 177 IPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVED 228 + + N YGP P ++ + R+++G V LY GD VRD++YV D Sbjct: 163 LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGD 222 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 A L L + YN+G +++ + ++ ++ RP Sbjct: 223 VAEAHALALFS--LEGIYNVGTGEGHTTREVLMAVA--------EAAGKAPEVQPAPPRP 272 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G R + K+ + GW P+ + G+ TV Sbjct: 273 GDLERSVLSPLKLMAH-GWRPKVGFQEGIRLTV 304 >gi|212212700|ref|YP_002303636.1| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii CbuG_Q212] gi|212011110|gb|ACJ18491.1| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii CbuG_Q212] Length = 339 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 119 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLF 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 176 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 235 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN D + A++ K+ + Sbjct: 236 TLDHPPEPNSAYSANQANPAKSNAPYRIYNIGSNNPILLTDFI--------AILEKTLNK 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 288 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 335 >gi|88860028|ref|ZP_01134667.1| putative nucleotide sugar epimerase [Pseudoalteromonas tunicata D2] gi|88818022|gb|EAR27838.1| putative nucleotide sugar epimerase [Pseudoalteromonas tunicata D2] Length = 346 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 54/365 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGS + L ++ QV+ +D L A L LK I F+F++ Sbjct: 1 MKYLVTGAAGFIGSFVAERLC-EMGHQVIGLDNLNDYYDPALKLARLKRIEHFANFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + Q D +++ AA++ V SI +I +N++G +LE R Sbjct: 60 MDLADRDAIAALFARAQFDCVIHLAAQAGVRYSIDNPMAYIDSNLVGMATVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG+ K F+E D +P S Y+ATK S++ + + H Y Sbjct: 116 ----HNKVQ-HLVYASSSSVYGANTKVPFAESDQVDHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P T I + ++ G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPD-MAPFLFTDAIAHQRPIKVFNHGNMRRDFTYIDDIVEGVI 229 Query: 235 LV-------------------LKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLD 268 + L KG + YNI GNN+ + ++ Sbjct: 230 RIQALIPAPNKVELNKELNEELSKGTTQQSRSPYYQLYNI-GNNQPETLEHFI------- 281 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + I + + ++ + G + D S ++S I + P + G+++ V WY D Sbjct: 282 SCIETALGKKAIKEYLPMQAGDVIQTYADVSSLESAIDFKPNTTLADGISQFVNWYTD-- 339 Query: 329 WWWRP 333 +++P Sbjct: 340 -FYKP 343 >gi|254439602|ref|ZP_05053096.1| NAD dependent epimerase/dehydratase family [Octadecabacter antarcticus 307] gi|198255048|gb|EDY79362.1| NAD dependent epimerase/dehydratase family [Octadecabacter antarcticus 307] Length = 339 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 100/356 (28%), Positives = 152/356 (42%), Gaps = 54/356 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF---SFLQVD 58 + +VTG AGFIG LC++L+ V+ D +T ++ LKE Q+NL F V+ Sbjct: 3 KALVTGSAGFIGYHLCKHLLA-AGFDVIGFDAMTDYYDVR-LKERRQANLLQSSGFRAVN 60 Query: 59 ICDRECIRSALKEF----QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DR L + QPD +V+ A ++ V SI+ +I NIIGTF LLE R Sbjct: 61 --DRLEADGVLMDLVAAEQPDFVVHLAGQAGVRYSIVEPRSYIDANIIGTFNLLEAVR-- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 L ST YG+ K +SE D S Y+ATK S++ + ++ H Sbjct: 117 -------ATPVKHLLLASTSSAYGANTKMPYSETDKADTQMSFYAATKKSNEVMAHSYAH 169 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP + YGP+ P+ + ++ G + +Y G RD+ YV D VR + Sbjct: 170 LYDIPTTMFRFFTVYGPWGRPDMALFKFTKAILNGDPIDVYNHGDMSRDFTYVTDLVRGI 229 Query: 234 YLVLKKGRIGER-----------------------YNIGGNNERKNIDIVFEIGFLLDAL 270 +L+L I ER NI GN E + E Sbjct: 230 HLLLNA--IPERLDDVPAPQVFDGDSLSPVAPHRIVNI-GNGEPVQLMAFIEA------- 279 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I + F++ +PG D + ++ G+ P+ ++ +G+ V WY D Sbjct: 280 IEGALGQPAAKNFMDMQPGDVPATWADGALLQKLTGYTPKTDVTTGVKAFVDWYRD 335 >gi|217076508|ref|YP_002334224.1| nucleoside-diphosphate-sugar epimerase [Thermosipho africanus TCF52B] gi|217036361|gb|ACJ74883.1| nucleoside-diphosphate-sugar epimerase [Thermosipho africanus TCF52B] Length = 310 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 156/334 (46%), Gaps = 34/334 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS + L+ + +V+V+D L+ N K+ + + DI Sbjct: 1 MKALVTGGAGFIGSHVVDKLIEN-GYEVVVVDNLSRGKKENVNKDAT------LVVADIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + I KE + + AA++ V S+ E NIIG+ +LL+ + + Sbjct: 54 DEKTIEELFKEHNFSYVFHLAAQASVSVSVKDPVEDANVNIIGSLVLLKNSIKYGVK--- 110 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS--EDMPYNPSSPYSATKAS-SDYLVLAWGHTYG 176 +F+ ST +YG D +F E + P SPY K S +YL A +G Sbjct: 111 ------KFIFSSTGGAIYGD-DVDIFPTPESVFPKPISPYGIAKFSFENYLKFA-NKEFG 162 Query: 177 IPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + +N YGP P ++ + RM+ G V + GDG+ +RD++YVED A Sbjct: 163 LNYTVLRYANVYGPRQDPFGEAGVVAIFTMRMLNGEDVIINGDGEYIRDYVYVEDVADAN 222 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 LK G G NI G ++ +++ +F + K +T+ + R G R+ Sbjct: 223 LRALKAGD-GMEINI-GTSQGTSVNQLFN-------YLKKITGYTKDPVYGPPRKGDIRK 273 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + ++ E+ W P+ ++E GL TV W+ N Sbjct: 274 SLLCYTRALEELRWKPKVDIEKGLRLTVEWFKRN 307 >gi|227517609|ref|ZP_03947658.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] gi|227074947|gb|EEI12910.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] Length = 319 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSMICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LDLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|238919230|ref|YP_002932745.1| UDP-glucuronate 5'-epimerase [Edwardsiella ictaluri 93-146] gi|238868799|gb|ACR68510.1| UDP-glucuronate 5'-epimerase [Edwardsiella ictaluri 93-146] Length = 335 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIG+ LC L+ QV ID L ++ SLK+ + L F++ Sbjct: 1 MRVLVTGCAGFIGANLCGRLLA-AGHQVEGIDNLNDYYDV-SLKQARLAPLQADANFTYH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +DI D E + + D +V+ AA++ V S+ + +N++G +LE R Sbjct: 59 PIDIADSEAMAALFSAAHFDRVVHLAAQAGVRYSLANPLSYAQSNLLGHVNVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + S+ VYG +K FS D +P S Y+ATK S++ + ++ H Sbjct: 116 ------HSNVGHLIYASSSSVYGLNNKVPFSTADRVDHPISLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ + M+EG + +Y G RD+ Y++D V + Sbjct: 170 YGLPTTGLRFFTVYGPWGRPDMALFKFTKSMLEGKPIDIYNHGDMQRDFTYIDDIVEGVL 229 Query: 235 L---VLKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+ + G R YNIG + + +D I L +AL ++ Sbjct: 230 RIMDVIPQPNAGWRVEQDSPAASSAPYRIYNIGHGSPVRLMDY---ITALEEALGIEAQK 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H F+ +PG + D+ + + G+ PQ +++G+ V WY Sbjct: 287 H-----FMPMQPGDVYQTYADTEDLFAVTGYRPQVGVKAGVQAFVDWY 329 >gi|86158378|ref|YP_465163.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774889|gb|ABC81726.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] Length = 312 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 41/335 (12%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R ++ G AGFIGS L R+L + V +D L G L +L+ +++ F FLQ D+ Sbjct: 4 QRAVILGAAGFIGSHLTDRFLSEGWR--VTGVDNLI-TGTLRNLEHLAREPRFDFLQADV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C I + DA+++FA+ + + E + +G LE R Sbjct: 61 CAPIAISGRV-----DAVLDFASPASPVDYLRHPFETLHVGSVGVENALELAR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 + FL ST EVYG + E P P + Y K ++ + +A+ Sbjct: 109 ---RSGAPFLLSSTSEVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVAYRRY 165 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +PV ++ N YGP + +++P + + + G + ++GDG R + YV+D+V A Sbjct: 166 REVPVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPITVFGDGTQTRSFCYVDDNVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---G 289 ++ +L + N+G ++E ++ + L+ +P IE RP Sbjct: 226 IWRLLHSD-CQDPVNVGDDHEMTVLEFAQAVQRLVGRTVP-----------IEHRPLPQD 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D ++ + +GW P+ E G+ +T+ W+ Sbjct: 274 DPRVRRPDLTRARERLGWTPRIGFEEGMRRTIDWF 308 >gi|153207997|ref|ZP_01946531.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii 'MSU Goat Q177'] gi|165918926|ref|ZP_02219012.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii RSA 334] gi|120576197|gb|EAX32821.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii 'MSU Goat Q177'] gi|165917396|gb|EDR36000.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii RSA 334] Length = 334 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 1 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 60 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 114 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 171 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 230 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN D + A++ K+ + Sbjct: 231 TLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTDFI--------AILEKTLNK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 283 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 330 >gi|83858997|ref|ZP_00952518.1| NAD-dependent epimerase/dehydratase family protein [Oceanicaulis alexandrii HTCC2633] gi|83852444|gb|EAP90297.1| NAD-dependent epimerase/dehydratase family protein [Oceanicaulis alexandrii HTCC2633] Length = 324 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQVD 58 ++VTG AGFIG + + L+ + +V+ +D Y L + E+SQ F ++ D Sbjct: 5 VLVTGAAGFIGMHVAQRLLERGE-RVVGVDNYNDYYDPGLKEARAAELSQHTAFEMVRGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D I + +K+ IV+ AA++ V S+ + +N+ G LLE R Sbjct: 64 IADHAMIGALVKQHGVKRIVHLAAQAGVRYSLENPFAYERSNLAGHLSLLEAAR------ 117 Query: 119 SQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG LD FSED P P S Y+ATK S + L ++ H Y Sbjct: 118 ---HNGVTHMVYASSSSVYGDRPLDGKCFSEDDPTVTPVSLYAATKRSCELLSQSYAHLY 174 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G P+ YGP+ P+ M G + +YG+G+ RD+ Y++D V + Sbjct: 175 GFPLSGLRFFTVYGPWGRPDMAYFKFSQMMARGQAIEVYGEGKMARDFTYIDDIVDGVIG 234 Query: 236 VLKKGRIG---ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 VL E YNIG ++ +D++ E L+A +++R ++ PG Sbjct: 235 VLDNPPPTGGHEVYNIGDSHPVGLMDMISTLEQALGLEA--------EKIMRPMQ--PGD 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK+++ G+ P+ + GL + W Sbjct: 285 VTATYADVSKLRALTGYKPKVMLAEGLERFAAW 317 >gi|330818959|ref|YP_004385938.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] gi|329130095|gb|AEB74647.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] Length = 312 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 37/329 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGFIGS L LV + V V+D L+ G + +LK++ +F + D+C Sbjct: 2 VRVLVTGGAGFIGSNLVISLVKE-GCDVTVVDDLS-MGMMKNLKDVQGKIIF--YKHDVC 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL--LEETRLWWSCL 118 D + L + D I AA + V S+ +IT + ++ LE R+ Sbjct: 58 DHVFMHRVL-DANFDYIYYLAAVASVVDSV--ERPYITHQVNQESVVNSLEYLRI----- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +FL +S+ VYG+ + E+ P +PY+ K +S+ + +G YG+ Sbjct: 110 --NHYFPKKFLFVSSAAVYGNYPELPKKENGRVQPLTPYAVDKYASERFTIDYGTLYGLS 167 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 ++ N +GP P ++ + +++ +YGDG RD++YV+D VRAL Sbjct: 168 TVVVRFFNVFGPRQNPSSPYSGVLSIVTKCLLKSKKFIMYGDGSQTRDFVYVDDIVRALI 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFE----IGFLLDALIPKSYSHTELIRFIEDRPGH 290 + KK YNIG + K +D++ + G LD I F + R G Sbjct: 228 FISKKKETCGVYNIGYGEQNKLLDVIRQYEKIAGKRLD------------IEFKDPRSGD 275 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + D +++K + G+ + +E+GL K Sbjct: 276 IQESMADVTRLK-KTGFVAKWGLENGLKK 303 >gi|120598295|ref|YP_962869.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. W3-18-1] gi|120558388|gb|ABM24315.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. W3-18-1] Length = 109 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/105 (47%), Positives = 73/105 (69%), Gaps = 10/105 (9%) Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT---------ELIRF 283 ++LV +GR+G+ YNIGG+NER NI++V +I LL+ L P ++ H LI+ Sbjct: 1 MFLVATQGRLGQTYNIGGSNERSNIEVVQKICDLLEELAP-THPHAFAVNGIGFRGLIQH 59 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +EDRPG+D RYAID+SK++ E+GW P E+ ESGL KTV W ++ + Sbjct: 60 VEDRPGYDVRYAIDASKLEHELGWQPYESFESGLRKTVKWIVEQS 104 >gi|240136915|ref|YP_002961382.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] gi|240006879|gb|ACS38105.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens AM1] Length = 346 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 41/337 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D L G ++L +S+ F F++ DI + Sbjct: 8 VLVAGGAGFIGSHLVDALLAR-GARVVALDSL-LTGRRDNLAHLSREPRFEFVEADITE- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L F+ + N A + + T+++GT LLE R Sbjct: 65 --PLPRLPRFE--RVFNLACAASPPHYQADPIHTMLTSVVGTLRLLERAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHTY 175 D RFLQ ST EVYG D + + Y NP+ P Y K +++ L + Sbjct: 111 NDGARFLQASTSEVYG--DPLVHPQPEAYWGNVNPTGPRACYDEGKRAAETLAFDFERGQ 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ I + + + V +YGDG+ R + YV D V L Sbjct: 169 GLEVRVARIFNTYGPRMRADDGRVVSNVICQALADAPVTVYGDGEQTRSFCYVTDLVEGL 228 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L+ + G N+G E ++V + + + + + ++R D P Sbjct: 229 MRLMACEAASGGPVNLGNPREMTVAELVSLVSEM-------TGTRSPVVRRPLPVDDP-- 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R D ++ ++ +GW P+ +E GL T+ W+ D Sbjct: 280 -QRRRPDIARAQALLGWSPKVALEQGLEATIAWFADE 315 >gi|94970522|ref|YP_592570.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] gi|94552572|gb|ABF42496.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] Length = 369 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 99/348 (28%), Positives = 153/348 (43%), Gaps = 40/348 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++ GGAGFIGS L +L+ + +V + D L+ G NL+ L+ ++ ++ LQ+ + Sbjct: 12 LILGGAGFIGSNLASWLLQNTSAKVHIFDNLSRFGVRNNLDWLQGMAATS--GRLQITVG 69 Query: 61 D-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D R+ I +FAA+ V SI N+ GT +LE R Sbjct: 70 DVRDAAHVERVVRHATEIYHFAAQVAVTTSISDPRHDFEVNLGGTVNVLEAAR------- 122 Query: 120 QDKKDQFRFLQISTDEVYG---------------SLDKGLFSEDMPYNPSSPYSATKASS 164 + F F ST++VYG S + SE P + SPY +K ++ Sbjct: 123 KSDNQPFIFF-TSTNKVYGDFGAEDLYLDGKRYRSKNAAGTSETQPLDFHSPYGCSKGAA 181 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVR 221 D V + YG+ ++ S G F + + + + G+ + +YG+G+ VR Sbjct: 182 DQYVRDYARIYGLNTVVFRMSCIAGQQQFGNEDQGWVAHFLYSALRGAPITIYGNGKQVR 241 Query: 222 DWLYVEDHVRALYLV--LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D L V+D VRA+ L L G YNIGG E N + E L+D L+ H Sbjct: 242 DVLCVDDLVRAIDLARQLPASSEGRIYNIGGGAE--NALSLLE---LMD-LVKSVTGHGC 295 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + + RPG Y D +K K + GW P+ + E L K +Y N Sbjct: 296 DVTYDAARPGDQLYYVTDFAKFKRDSGWQPEISPEGTLKKIYDFYKKN 343 >gi|238019556|ref|ZP_04599982.1| hypothetical protein VEIDISOL_01425 [Veillonella dispar ATCC 17748] gi|237864255|gb|EEP65545.1| hypothetical protein VEIDISOL_01425 [Veillonella dispar ATCC 17748] Length = 319 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS L L+ +L VLVID L+ G + + E +Q F+++D+ Sbjct: 13 MNICVTGGAGFIGSHLVDRLI-ELGHNVLVIDNLS-TGMRSFVHESAQ-----FIEMDVR 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S +EF+P + + AA++ V S+ N++G +L+ R Sbjct: 66 DPKLV-SIFEEFKPSIVFHEAAQTMVQSSMENPGYDCDVNLLGLINVLDACR-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +FL S+ VYG L +E++ PSS Y TK +++ + + +G+ + Sbjct: 117 -KVKVEQFLMPSSAAVYGDLAVLPLTEELSGMPSSFYGLTKLTAEGYLRIYREAFGLNTV 175 Query: 181 LSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP +I + ++EG + +YGDG+ RD++YVED V A + Sbjct: 176 CFRYANVYGPRQGDGGEGGVISIFNRLIVEGKPLTVYGDGEQTRDFIYVEDVVEANIKAM 235 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE---LIRFIEDRPGHDRRY 294 YN+ N G ++ LI + + + ++ + +R G + Sbjct: 236 GNNNCTGIYNVSTNT-----------GTSVNELITRFRTISGADFMVHYEAERIGDIKHS 284 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++K + + G+ ++ GL KT+ ++ Sbjct: 285 RLSNAKAERDFGFVASTTLDDGLQKTLEYF 314 >gi|313892801|ref|ZP_07826382.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442732|gb|EFR61143.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] Length = 307 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 160/330 (48%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGGAGFIGS L L+ +L VLVID L+ G + + E +Q F+++D+ Sbjct: 1 MNICVTGGAGFIGSHLVDRLI-ELGHNVLVIDNLS-TGMHSFVHEAAQ-----FIEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + S +EF+P + + AA++ V S+ N++G +L+ R Q Sbjct: 54 DPKLV-SIFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLLGLINVLDACR-------Q 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +Q L S+ VYG L E++ PSS Y TK +++ + + T+G+ + Sbjct: 106 VKVEQV--LMPSSAAVYGDLAVLPLIEELSGMPSSFYGLTKLTAEGYLRIYRETFGLNTV 163 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP E + R+I EG + +YGDG+ RD++YV+D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISVFNRLIVEGQPLTVYGDGEQTRDFIYVDDVVDANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTE-LIRFIEDRPGHDRRY 294 + YN+ N G ++ LI ++ S + ++ + +R G + Sbjct: 224 GNSQCTGIYNVSTNK-----------GTSVNELITRFRAISGADFMVHYEAERVGDIKHS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++K + + G+ +E GL KT+ ++ Sbjct: 273 RLSNAKAERDFGFVATTTLEDGLQKTLEYF 302 >gi|20093250|ref|NP_619325.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] gi|19918603|gb|AAM07805.1| dTDP-glucose 4,6-dehydratase [Methanosarcina acetivorans C2A] Length = 298 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 145/315 (46%), Gaps = 32/315 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + Y + V ++D LT + N I Q F+Q DIC Sbjct: 1 MKVLITGGAGFIGSHIAEYFA-EAGHSVRILDNLTTGFSRN----IPQHRNVEFIQGDIC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ D + + AA V S E N +GT +L+ +C+ Sbjct: 56 DPSSVEKAVSGM--DCVFHEAALVSVPLSCEKPVEAFRINTLGTLNVLQ------ACVRA 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ S+ VYG+ + E+M P+SPY+ +K +YL + +G+ Sbjct: 108 GVE---KFVTASSAAVYGNNPELPKRENMYPEPASPYAISKLDGEYLARMFYEEHGLRTT 164 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P+ +IP+ + R G + +YGDG RD+++V+D V A Sbjct: 165 CLRYFNVYGPRQDPKSPYAAVIPIFLERAKAGKDLVIYGDGLQSRDFVHVKDVVMANVAA 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G G+ +N+ ++ L + +I + S +++I E R G R Sbjct: 225 LEHGD-GQVFNVAMGKSVTVLE-------LAENIIELTGSSSQIIH-AESRAGDVRDSRA 275 Query: 297 DSSKIKSEIGWFPQE 311 D SKI GW+ E Sbjct: 276 DVSKIS---GWWKGE 287 >gi|16263982|ref|NP_436774.1| putative CDP-tyvelose-2-epimerase protein [Sinorhizobium meliloti 1021] gi|307300165|ref|ZP_07579950.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] gi|307316482|ref|ZP_07595925.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|15140106|emb|CAC48634.1| putative CDP-tyvelose-2-epimerase [Sinorhizobium meliloti 1021] gi|306897680|gb|EFN28423.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|306905054|gb|EFN35637.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] Length = 373 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 53/356 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQVDIC 60 ++V GG+GF+G L + D + V+V+D L+ G +L+ + L DI Sbjct: 24 ILVVGGSGFLGCNLADSFLRDGE-HVIVLDNLSRPGVERNLEWLVDGHGRAVEALIADIR 82 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +A ++ + A+ +FAA++ V S+ + TN GT +LE RL Sbjct: 83 DLGAIEAAFRDAK--AVFHFAAQTAVTTSLERPTDDFETNARGTLNVLEAARL------A 134 Query: 121 DKKDQFRFLQISTDEVYGSLD-------KGLF------------SEDMPYNPSSPYSATK 161 ++ F ST++VYG+L +G + SE P + +PY +K Sbjct: 135 GRRAPVIF--ASTNKVYGALGHIEMQDMRGRYMPADEATREHGVSETQPLDFCTPYGCSK 192 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQ 218 +D VL + ++G+P + S YGP F + + + R + G + +YGDG+ Sbjct: 193 GVADQYVLDYARSFGLPTAVLRMSCVYGPRQFGTEDQGWVAHFLIRALAGEPISIYGDGK 252 Query: 219 NVRDWLYVEDHVRALYLVLK-----KGRIGERYNIGG--NNERKNIDIVFEIGFLLDALI 271 VRD L+V D V A +L KGR +N+GG N +D++ EI L + Sbjct: 253 QVRDILHVTDAVAAYRALLNSIDRLKGRA---FNLGGGPGNAVSIVDVLNEIELLTGRKL 309 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + S + R G + D+ I +GW GL W D+ Sbjct: 310 ATAKS--------DWRAGDQLYFVADTRAIADALGWKAGMPWREGLRDLYAWLHDD 357 >gi|308270588|emb|CBX27200.1| Putative UDP-glucose 4-epimerase [uncultured Desulfobacterium sp.] Length = 322 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 33/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M+ +V GG GFIGS + LV D K V + D L+ Y N++S + N F++ D Sbjct: 11 MKYLVIGGCGFIGSHIAEKLVRDGK-SVRIFDNLSSGYEENISSFR-----NKVEFIKSD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D I +A+ D + + AA V S+ + NI GT +L L Sbjct: 65 IRDISAINAAMAGI--DYVFHEAALVSVFDSVKRPKDNHDINITGTINVL---------L 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + R + ++ YG+ EDM P SPY K +S+ + + YG+ Sbjct: 114 AAREAGVKRLVFAASAAAYGNNPLLPKKEDMKPEPESPYGLAKVTSEQYLALFSKLYGLE 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP P + I+R +E G +YGDG RD+++VED V+A Sbjct: 174 TVNLRYFNVYGPRQDPGSMYSGVISRFVEAVLKGESPTVYGDGSQTRDFVFVEDIVQANL 233 Query: 235 LVLKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + I GE +NIG + +D LL+ L + S E I+F E R G + Sbjct: 234 LAMHTPGIGCGEIFNIGSGKQTSLLD-------LLEILKDITGSDFE-IKFAESRQGDIK 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D + ++ + P+ ++++GL + V + + Sbjct: 286 HSVADITLAVQKLSYSPKYDVQTGLKRLVDYVV 318 >gi|294506509|ref|YP_003570567.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] gi|294342837|emb|CBH23615.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] Length = 332 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 143/329 (43%), Gaps = 23/329 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDIC 60 ++VTG GFIGS L LV+ K +V + + L+ + L D+ Sbjct: 4 ILVTGADGFIGSHLVEGLVDQGK-EVRAFVRYNAFNSWGWLETVDDDVLEAIEIFSGDVR 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R +++ D + + AA + S D ++ TN+ GT +L+ R Sbjct: 63 DPNGVRESMRGV--DVVYHLAALISIPYSYHSPDTYVDTNVTGTLNVLQAAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + ST EVYGS +E+ P SPY+A+K +D + L++ ++ PV Sbjct: 113 -DSGTEKVVHTSTSEVYGSAQFVPITEEHPLQGQSPYAASKIGADQMALSFYRSFDTPVA 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP +IP IT++ G G+ RD+ YVED VR V Sbjct: 172 VIRPFNTYGPRQSTRAVIPTIITQIASGRRTLELGNLHPTRDFSYVEDTVRGFMAVADSD 231 Query: 241 RIGERYNIGGNNERKNI-DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 + G+ +I D+V I +D + T+ R ++ DR YA D S Sbjct: 232 EVVGEVVNVGSGFEISIGDLVDLIAEAMDVEVS---VETDKERTRPEKSEVDRLYA-DIS 287 Query: 300 KIKSEIGWFP----QENMESGLNKTVCWY 324 K + +GW P ++ + GL KT W+ Sbjct: 288 KAEKLLGWTPTHGGRDGFKRGLQKTAEWF 316 >gi|322807009|emb|CBZ04579.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 305 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 158/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L++ + V +ID L+ GN+N++ + ++ + L +I Sbjct: 1 MKILVTGGAGFIGSNLVDKLIS-MGNDVCIIDNLS-TGNINNVNKKARLYINDILDSNIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 59 N------IFKKEKFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + +SY I + E R G + + Sbjct: 224 CNGS-RNLFNIGTGVYTTVKDLA---QMMIDTMKVQSY-----IEYQEARKGDIEKSHFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ N++ GL KT+ +Y DN Sbjct: 275 IEKAKVELKWEPKYNLQKGLIKTINYYKDN 304 >gi|225851516|ref|YP_002731750.1| CDP-paratose 2-epimerase (CDP-tyvelose 2-epimerase) [Persephonella marina EX-H1] gi|225645922|gb|ACO04108.1| CDP-paratose 2-epimerase (CDP-tyvelose 2-epimerase) [Persephonella marina EX-H1] Length = 340 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GF+GS L ++ + ++++ D L G+ +L+ + F F+ DI Sbjct: 1 MKYLITGGCGFLGSNLATEVLGRNE-ELIIFDNLYRVGSYKNLEWLKTKGNFKFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE I S +K+ +PD I + A + + SI N +GTF LL+ R + Sbjct: 60 NREDIESVIKQEKPDIIFHLAGQVAMTTSIQNPRLDFEVNALGTFNLLDSVRKF------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLD-----------------KGLFSEDMPYNPSSPYSATKAS 163 + + ST++VYG L+ KG F E++P SPY +K S Sbjct: 114 --SPESIVIYSSTNKVYGDLEWVNYEETETRYIAPQFPKG-FPENIPLEFHSPYGCSKGS 170 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK---------LIPLAITRMIEGSHVFLY 214 +D +L + +GI ++ S+ YG F L + + I ++ Sbjct: 171 ADQYMLDFYRIFGIRTVVFRHSSMYGGRQFSTYDQGWIGWFCLKAVETKKGILKEPFTIH 230 Query: 215 GDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G+G+ VRD LY +D + + ++ + GE +NIGG E + I Sbjct: 231 GNGKQVRDVLYADDMIDLYFKTVENIEKVKGEVFNIGGGMENSLSLLELFNLLESMLDIK 290 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y + R + + D +K + I W P+ + E G+ + + W Sbjct: 291 LEYKK------LPPRESDQKVFVADITKAEKLINWKPKVSKEEGIKRMINW 335 >gi|406096|gb|AAA65536.1| UDP-N-acetyl-D-glucosamine-2-epimerase [Neisseria meningitidis] Length = 88 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/86 (50%), Positives = 66/86 (76%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGSA+ R+++ + + V+ +DKLTYAGNL SL E++ + ++F QVDICD Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVD 87 R + +++PDA+++ AAESHVD Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVD 88 >gi|163942946|ref|YP_001647830.1| UDP-glucose 4-epimerase [Bacillus weihenstephanensis KBAB4] gi|163865143|gb|ABY46202.1| UDP-glucose 4-epimerase [Bacillus weihenstephanensis KBAB4] Length = 330 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 EFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 ++F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VEKFIFS--STAATYGEVDVDLITEETKTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTKHEIPAEM 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWNPE 306 >gi|170761061|ref|YP_001788029.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] gi|169408050|gb|ACA56461.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] Length = 330 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 154/334 (46%), Gaps = 19/334 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDI 59 ++ +TG GFIGS L LV L V + + N + S+ + + + D+ Sbjct: 7 KVFITGAEGFIGSHLTEKLVQ-LGANVTALVQYNSFNNWGWIDTFSKEVKDSINVVTGDM 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + ++ +K D + + AA + S L ++ TN+ GT +LE R + Sbjct: 66 REYDGMKRIIK--GQDVVFHLAALIAIPYSYLSPMAYVKTNVEGTTNVLEACREY----- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + ST E YG+ E P SPYSA+K ++D + ++ ++ +PV Sbjct: 119 ----EVEKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIAADKMAESFYRSFNLPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP +IP I++++EG G RD+ YV+D A V + Sbjct: 175 AIIRPFNTYGPRQSARAVIPTIISQILEGKTEIKLGSLSPTRDFNYVKDTAEAFIKVAES 234 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + IG+ N G N E D V +I ++ + K E IR ++ +R +A D+ Sbjct: 235 DKTIGQVINAGSNYEISIGDTVKKIINIMGNDV-KILCDEERIR--PEKSEVNRLWA-DN 290 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK W P+ N++ GL +T+ W +N +++ Sbjct: 291 RKIKELTSWNPRYNLDDGLKETIEWIRNNMKYFK 324 >gi|108758739|ref|YP_633478.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Myxococcus xanthus DK 1622] gi|108462619|gb|ABF87804.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Myxococcus xanthus DK 1622] Length = 308 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 26/260 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG GF+G LC L D++ A E SN F D+ Sbjct: 1 MRILVTGADGFVGRHLCALLRA-------AGDEVVEAHGPRG--EGINSNALHF---DVA 48 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +++A+ E +P+ I++ A S V +S N +G LL R Sbjct: 49 NEASVKAAVAEVKPEGIIHLAGFSSVAKSHHNPSRVFAVNTMGVVHLLTAVR-------- 100 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + R + + + EVYG + +G +ED P P SPY+A+K++++ + + +YG+ V Sbjct: 101 ESVPKARVVLVGSGEVYGPVPEGTRATEDTPAVPLSPYAASKSAAELAAVQFHRSYGLEV 160 Query: 180 LLSNCSNNYGPYHFPEKLIP--LAITRMIE-GS--HVFLYGDGQNVRDWLYVEDHVRALY 234 +++ N+ G P ++P A R I G+ V G+ VRD+ +V D V A Sbjct: 161 VMARPFNHLGAGQDPTFVVPSFAAQIRAIGLGTVDPVLRTGNLDAVRDFSHVRDVVEAYR 220 Query: 235 LVLKKGRIGERYNIGGNNER 254 L+L KG G+ YNIG R Sbjct: 221 LLLDKGEPGQAYNIGSGEGR 240 >gi|91214608|ref|ZP_01251581.1| NAD-dependent epimerase/dehydratase family protein [Psychroflexus torquis ATCC 700755] gi|91187035|gb|EAS73405.1| NAD-dependent epimerase/dehydratase family protein [Psychroflexus torquis ATCC 700755] Length = 327 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 25/326 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R +VTGGAGFIGS + YL+ V V+D L+ G ++KE + F FL+ DI Sbjct: 14 FRFLVTGGAGFIGSNIVEYLLKFGAKHVRVLDNLS-NGYRTNIKEFESESNFEFLEGDIR 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E A+++ D +++ AA V RSI D+ I +N + L + +C + Sbjct: 73 KIEDCEQAVEDI--DIVLHQAALGSVPRSI---DDPILSNSVNVSGFL---NMLVAC--K 122 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K RF+ ++ YG E+ P SPY+ TK ++ + TYG+ V+ Sbjct: 123 NSKTVKRFVYAASSSTYGDSPTLPKVENTIGKPLSPYAVTKYVNELYADVFAKTYGLEVI 182 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP PE +IPL + + + + + GDG+ RD+ +VE+ V+A Sbjct: 183 GLRYFNVFGPKQSPEGAYAAVIPLFMQSLKDQNSPTMNGDGEQTRDFTFVENAVQANIKA 242 Query: 237 --LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 K E YN+ + + L AL S S + I + R G + Sbjct: 243 SFADKKATNEVYNVACGDR-------ISLNLLWSALEKASGSSLKAI-YGPPRQGDVKDS 294 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKT 320 D +K K IG+ P+ N+E GL T Sbjct: 295 LADINKAKELIGYEPKFNVEEGLKIT 320 >gi|228475494|ref|ZP_04060212.1| VI polysaccharide biosynthesis protein VipB/tviC [Staphylococcus hominis SK119] gi|228270276|gb|EEK11711.1| VI polysaccharide biosynthesis protein VipB/tviC [Staphylococcus hominis SK119] Length = 316 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 33/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + Y + +V +ID L+ +G L ++ ++ +++ DI Sbjct: 1 MKVLITGGAGFIGSHVAEYFMKH-DTEVHIIDNLS-SGFLKNIPFVNNEHIYI---KDIT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++ Q D +++ AA V +I + NI T +LE R++ + Sbjct: 56 DFEFVTQLIQKEQFDFVIHLAAMVSVVETIEKPELSNRINIDATVNILEAIRIYNPNI-- 113 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK F S+ +YG L + P+ P SPY+ K + + + H Y IP Sbjct: 114 -KKVIFA----SSAAIYGHLPDLPKSVEQSKPF-PLSPYAIQKYTGEQYTKIYNHLYQIP 167 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P +I + T+ + S YGDG+ RD++Y++D + AL Sbjct: 168 CTCLRFFNIYGPRQNPTSDYSGVISIMNTKFLNHSTFTFYGDGEQTRDFVYIDDLINALS 227 Query: 235 LVLKKGRI-GERYNIGGNNER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 +VL G YN+G + K + FE GF D IP +F R G Sbjct: 228 IVLNTTLTDGFIYNVGTGTQTNLKAVFQSFEHGF--DYHIPY--------QFEAPRLGDI 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + D + +K+ +G+ P+ ++E G+ + + NN Sbjct: 278 KHSCADITPLKA-LGYNPRYSIEEGITAYLTYNKHNN 313 >gi|251799454|ref|YP_003014185.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247547080|gb|ACT04099.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 345 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 153/354 (43%), Gaps = 48/354 (13%) Query: 5 VTGGAGFIGSALCRYL---------------VNDLKIQVLVIDKLTYA-----------G 38 VTGGAGFIGS LC L V D K ++ I T + G Sbjct: 6 VTGGAGFIGSHLCEQLLAQGHRVVNIDNFNDVYDYKTKIRNILNSTRSEFSFPCSGDKDG 65 Query: 39 NLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 +L L+ + +S+ + + DI + + + + DA+++ AA + V SI + Sbjct: 66 DLAKLQAVVESDDYRLVVADIRSMDELEAVFASERIDAVIHLAAMAGVRPSIEDPLLYED 125 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPY 157 N+ GT +LE R K ++L S+ VYG+ K FSE+ + S SPY Sbjct: 126 VNVKGTLHILEVMR---------KHGVRKWLCASSSSVYGNNRKVPFSEEDVVDYSISPY 176 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDG 217 +ATK + + L + H + I ++ YG P+ I + + + +YGDG Sbjct: 177 AATKKACEVLGHTYHHLHHIDTIMLRFFTVYGERQRPDLAIHKFAGMLDKDEELTMYGDG 236 Query: 218 QNVRDWLYVEDHVR----ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 + RD+ Y+ D + AL V + + E N+G N D++ + + Sbjct: 237 SSRRDYTYIGDIIAGILGALSYVERMENLYEVVNLGTNRTITLRDLITS--------LEQ 288 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + LIR + ++PG + D SK G+ PQ + G++K V WY N Sbjct: 289 EFGKRALIRTLPNQPGDVEQTYADVSKANQLFGYHPQTDFAEGIHKFVTWYRGN 342 >gi|237714670|ref|ZP_04545151.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406537|ref|ZP_06083086.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645686|ref|ZP_06723373.1| NAD-binding protein [Bacteroides ovatus SD CC 2a] gi|294806955|ref|ZP_06765778.1| NAD-binding protein [Bacteroides xylanisolvens SD CC 1b] gi|229445439|gb|EEO51230.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355240|gb|EEZ04331.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638965|gb|EFF57296.1| NAD-binding protein [Bacteroides ovatus SD CC 2a] gi|294445842|gb|EFG14486.1| NAD-binding protein [Bacteroides xylanisolvens SD CC 1b] Length = 344 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 48/354 (13%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNL-------N 41 M+++VTG AGFIGS L L +N+ L +L+ G + N Sbjct: 1 MKILVTGAAGFIGSKLMGVLASRGDEVVGIDSINNYYDVRLKYGRLSEMGIMLNDEFVWN 60 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + S+ F+++ I DR + + + +VN AA++ V SI ++ +N+ Sbjct: 61 QPIQSSRYETCRFIRMSIDDRHAMEELFEREHFEKVVNLAAQAGVRYSITNPYAYLQSNL 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 G +LE C + F S+ VYG K +SE D P S Y+AT Sbjct: 121 AGFLNVLE-------CCRHYEVKHLVFA--SSSSVYGLNSKVPYSEEDKVDTPVSLYAAT 171 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQN 219 K S++ + ++ YG+ V YGP+ P+ + P+ R I G + ++ +G Sbjct: 172 KKSNELMAHSYSKLYGLAVTGLRFFTVYGPWGRPD-MAPMLFARAISNGEQIKVFNNGDM 230 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFLLDAL 270 +RD+ Y++D V L + ++ YNIG ++ K +D + E Sbjct: 231 IRDFTYIDDIVEGTIRTLDHVPVTQKSSNGVAYKIYNIGCSHPVKLMDFIHE-------- 282 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I + H F+ +PG + D+S +K EIG+ P + G+ K + WY Sbjct: 283 IESAMGHEAEKIFLPMQPGDVYQTNADTSMLKKEIGYEPMVTLHDGVAKFIQWY 336 >gi|285019467|ref|YP_003377178.1| NDP-hexose oxidoreductase [Xanthomonas albilineans GPE PC73] gi|283474685|emb|CBA17184.1| probable ndp-hexose oxidoreductase protein [Xanthomonas albilineans] Length = 306 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 51/330 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L+VTG GF+G L + G ++ +S D+ D Sbjct: 7 KLLVTGAGGFVGKHLLDAVAR---------------GQFGHVEAMSLPA-----GTDLRD 46 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE-TRLWWSCLSQ 120 I SAL + PDA+V+ AA+S V +S DE + N+IGT LL+ R +S Sbjct: 47 MAAIESALGDACPDAVVHLAAQSFVPQSFDDPDETLQVNLIGTLHLLQALARKGFSG--- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWGHT 174 RFL +S+ ++YG + +G D+P + P SPY+ +K +++ L + W + Sbjct: 104 ------RFLYVSSGDIYGRVPEG----DLPVDETLLPEPRSPYAVSKWAAEQLCMQWHRS 153 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDH 229 + V+++ N+ G F + + + EG V GD RD+ V D Sbjct: 154 EKLDVVIARPFNHVGAGQGGRFVLSSLARQVVAIAEGRQPAVIEAGDIDTTRDFSDVRDV 213 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A +L +GR G Y + ER+ D++ E+ L ++ RP Sbjct: 214 VSAYAALLTRGRSGGIYIVASGVERRVRDLLLEMCRLTGVEAEVRQDPAKM------RPA 267 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 RR +K++S+ GW +++S L++ Sbjct: 268 EQRRMVASPAKLQSDTGWMQAFDIQSTLSE 297 >gi|46200722|ref|ZP_00207816.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 315 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 143/326 (43%), Gaps = 26/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAG +GS L R L + ++ + +A L L + + L+ D+ D Sbjct: 7 FLLTGGAGHLGSLLARRLADQGHRVFSLVRRGGHALRLEDL-----GDRITRLEADVSDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++A++ +PD + + ++ L ++TN+ G L+E + + Sbjct: 62 ASLKAAVEAARPDVVFHLSSSVFNPPPTLAT--HLSTNVSGAANLIE---------ALEA 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + ST +YG+ ++ ED P++ A+KAS+ L A G P+ Sbjct: 111 LPRTQIIYASTAAIYGNANRA--PEDQAPAPATWLGASKASASLLFAAHARMTGRPITEF 168 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +GP+ +LIP I ++G + +G+ RD+LY +D + L L + K R Sbjct: 169 RIYTPFGPWERITRLIPQIIFSALDGKPIRTT-EGRQTRDYLYADDLIDLLELAVDKPRD 227 Query: 243 GER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G R YN G IV + L+ + L I RP D S+ Sbjct: 228 GWRAYNAGAGEGVPVRTIVSTVLELMGNPV------EGLFGAIPTRPDEIMEMTADISRA 281 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+E GW P ++ GL +TV W+ N Sbjct: 282 KAEFGWQPTTSLREGLTRTVGWFTTN 307 >gi|292488436|ref|YP_003531318.1| DNA topoisomerase III [Erwinia amylovora CFBP1430] gi|292899626|ref|YP_003538995.1| uridine diphosphate galacturonate 4-epimerase [Erwinia amylovora ATCC 49946] gi|291199474|emb|CBJ46591.1| putative uridine diphosphate galacturonate 4-epimerase (nucleotide sugar epimerase) [Erwinia amylovora ATCC 49946] gi|291553865|emb|CBA20910.1| DNA topoisomerase III [Erwinia amylovora CFBP1430] gi|312172578|emb|CBX80834.1| DNA topoisomerase III [Erwinia amylovora ATCC BAA-2158] Length = 335 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 156/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+N QV+ +D L Y NL + L IS F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVAQRLLN-AGHQVVGLDNLNDYYDVNLKTARLALISHHASFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE + + + +++ AA++ V S+ + N++G +LE R Sbjct: 60 GDLADREGMAELFRCHRFQRVIHLAAQAGVRYSLENPLAYADANLVGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS +D +P S Y+ATK +++ + + H Y Sbjct: 116 -----HNQVEHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + +I G + +Y GQ RD+ Y++D V +++ Sbjct: 171 GIPTSGLRFFTVYGPWGRPDMALFKFTRAIIAGEKIDVYNHGQMRRDFTYIDDIVESVFR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D + + L + K+ Sbjct: 231 LQEVIPQADKDWTVEAGSPATSSAPYRVYNIGNSQPVTLMDYIGALESALGTVADKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ +PG + D S + IG+ PQ +++ G+ + V WY Sbjct: 288 -----MLQMQPGDVVDTSADISALYKAIGFKPQTSVKEGVARFVSWY 329 >gi|138894393|ref|YP_001124846.1| nucleotide sugar epimerase [Geobacillus thermodenitrificans NG80-2] gi|196247996|ref|ZP_03146698.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. G11MC16] gi|134265906|gb|ABO66101.1| Nucleotide sugar epimerase [Geobacillus thermodenitrificans NG80-2] gi|196212780|gb|EDY07537.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. G11MC16] Length = 318 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 36/347 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG----NLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS LC L+ + + QV+ +D + ++ + F+ ++ Sbjct: 1 MNILVTGAAGFIGSHLCEKLLENDQHQVIGVDGFIGPTPAPLKMKNIAHLQSHPRFTLVE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEETRLW 114 D+ + + + LK+ + A+ + A V R+ G D ++ NI T LLE Sbjct: 61 TDLLTAD-LPALLKDVE--AVYHLAGMPGV-RTSWGTDFADYAVHNISVTQRLLE----- 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +C K RF+ ST VYG G SE + P SPY TK + ++L + Sbjct: 112 -ACKDLPLK---RFIYASTSSVYGE-RSGPLSETLEPVPLSPYGITKLTGEHLCRVYFRE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +PV++ YGP P+ I +++ G + ++GDG RD+ Y+ D + Sbjct: 167 FAVPVVILRYFTVYGPRQRPDMSFHRFIRQLLAGQPLTVFGDGTQSRDFTYISDCIDGTA 226 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L++ IGE NIGG ER +++ V LL+ L + + I + G ++ Sbjct: 227 AALERDHVIGETINIGG-KERASVNDVIH---LLEVLTGRKAT----IHYTSAARGEPKQ 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 D +K + + + P + GL K + + R LYK +P Sbjct: 279 TWADLTKAEQLLAYEPTITLIDGLQKEI-------EYIRSLYKGEQP 318 >gi|282878946|ref|ZP_06287710.1| NAD-binding domain 4 [Prevotella buccalis ATCC 35310] gi|281298945|gb|EFA91350.1| NAD-binding domain 4 [Prevotella buccalis ATCC 35310] Length = 342 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 156/355 (43%), Gaps = 46/355 (12%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKEISQ 48 MR++VTG AGFIGSA+ + L +ND L +L G +NS + + Sbjct: 1 MRILVTGAAGFIGSAVMKALAERGDSVIGIDNINDYYDTRLKYARLAACG-INSDEASWE 59 Query: 49 SNLFS--------FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 SN+ F+++ I D + + + D +VN AA++ V SI ++ +N Sbjct: 60 SNIVKTTLPYDCHFVRMSISDEQKMDQLFSRYAFDKVVNLAAQAGVRYSISNPRAYLNSN 119 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSA 159 + G F LLE C D+ F S+ VYG F ED M P S Y+A Sbjct: 120 LNGFFNLLE-------CCRNHHVDRLVF--ASSSSVYGLNSHVPFREDDMTDTPVSLYAA 170 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 +K + + + ++ YG+ YGP+ P+ L + + + ++ GQ Sbjct: 171 SKKADELMAHSYCKLYGLKATGLRYFTVYGPWGRPDMAPMLFANAICKNEPIKVFNQGQM 230 Query: 220 VRDWLYVEDHVRALYLVL-------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +RD+ Y++D V L + G + +NIG ++ + +D + E+ L Sbjct: 231 LRDFTYIDDIVEGTLRCLDAEIVPNQNGIHYDIFNIGCSHPIQLLDFISELEHALGKKAK 290 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K F+ +PG + D+SK+++ G+ PQ + G+ V WYL + Sbjct: 291 KI--------FLPMQPGDVYQTYADTSKLEAATGFRPQYQLAEGIRHFVDWYLSD 337 >gi|168180897|ref|ZP_02615561.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|168183253|ref|ZP_02617917.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|237796117|ref|YP_002863669.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|182668314|gb|EDT80293.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|182673690|gb|EDT85651.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|229261008|gb|ACQ52041.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 305 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L++ + V +ID L+ GN+N++ + ++ DI Sbjct: 1 MKILVTGGAGFIGSNLVDKLIS-MGNDVCIIDNLS-TGNINNVNKKAR-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 54 DSN-ISSIFKKERFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + K SH E + E R G + + Sbjct: 224 CNGS-RNLFNIGTGVYTTVKDLA---QMMIDTM--KVQSHIE---YQEARKGDIEKSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ N++ GL KT+ +Y DN Sbjct: 275 IEKAKVELKWEPKYNLQKGLIKTINYYKDN 304 >gi|209363918|ref|YP_001424292.2| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii Dugway 5J108-111] gi|207081851|gb|ABS77216.2| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii Dugway 5J108-111] Length = 339 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 119 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYSHLF 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 176 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 235 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN D + A++ K+ + Sbjct: 236 TLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTDFI--------AILEKTLNK 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 288 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 335 >gi|149174381|ref|ZP_01853008.1| nucleotide sugar epimerase (biosynthesis of lipopolysaccharide O antigen) [Planctomyces maris DSM 8797] gi|148846926|gb|EDL61262.1| nucleotide sugar epimerase (biosynthesis of lipopolysaccharide O antigen) [Planctomyces maris DSM 8797] Length = 340 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 51/353 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS----------LKEISQSNL 51 ++VTG AGFIG + L++ ++T NLNS L E+ Q Sbjct: 3 HILVTGAAGFIGFHVTARLLSQGH-------RVTGVDNLNSHYDVRLKRDRLAELRQFET 55 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F + DI D E + + +++ AAE V S+L E++ +N++G LLE+ Sbjct: 56 FEFHEADITDVESLSHLFVQNPFQKVIHLAAEVGVRNSLLKPLEYVQSNVLGFVNLLEQC 115 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 RL K+ + S+ VYG+ K +S D +P S Y+ATK + + + + Sbjct: 116 RL---------KEVEHVVYASSSSVYGANRKIPYSTHDAVDHPISLYAATKRADELIAHS 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y +P YGP+ P+ + L ++EG+ + ++ G RD+ YV+D V Sbjct: 167 YSHLYDLPTTGLRFFTVYGPWGRPDMAVYLFTKAILEGTPIKVFNHGNLKRDFTYVDDIV 226 Query: 231 RALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 + VL++ + E + N++ ++ IG I + LI IE Sbjct: 227 SGVLGVLEQIPVRTEPVSEATAVDLNDQTVAPYRLYNIGNHQPVGIAR------LIDVIE 280 Query: 286 DR-------------PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R PG D S+++ G+ P ++E G+++ V WYL Sbjct: 281 QRIGKPAIRENFPMQPGDVLETYADISELQQATGFTPSTSIEQGIDRFVDWYL 333 >gi|187732343|ref|YP_001879849.1| NAD dependent epimerase/dehydratase family [Shigella boydii CDC 3083-94] gi|331668728|ref|ZP_08369576.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli TA271] gi|5739472|gb|AAD50494.1|AF172324_12 WbnF [Escherichia coli] gi|187429335|gb|ACD08609.1| NAD dependent epimerase/dehydratase family [Shigella boydii CDC 3083-94] gi|331063922|gb|EGI35833.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli TA271] Length = 334 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYVSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 115 ----HNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAI--I 228 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + I E+ YNIG ++ ++++ I L +AL ++ Sbjct: 229 RLQDVIPEKDPQWTVETGSPATSSAPYRVYNIGNSSP---VELMDYINALEEALGIEANK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 286 NMMPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|160933120|ref|ZP_02080509.1| hypothetical protein CLOLEP_01963 [Clostridium leptum DSM 753] gi|156868194|gb|EDO61566.1| hypothetical protein CLOLEP_01963 [Clostridium leptum DSM 753] Length = 337 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 107/359 (29%), Positives = 163/359 (45%), Gaps = 58/359 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ + QV+V+D L + +L ++EI+ L +F Q D Sbjct: 1 MSILVTGGAGYIGSHTCIELL-EAGYQVVVVDNLCNSSKKSLERVQEITGKEL-TFYQDD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E + + + DA+++FA V S+ E+ N+ GTFILLE+ Sbjct: 59 LLDSEALDAIFQRESIDAVIHFAGLKAVGESVQKPLEYYHNNLTGTFILLEKM------- 111 Query: 119 SQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-- 175 KK Q + F+ S+ VYGS ED P + ++PY TK + VL HT Sbjct: 112 ---KKYQVKNFVFSSSATVYGSPKSVPIREDFPLHVTNPYGRTKLILEE-VLTDVHTADP 167 Query: 176 GIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGS--HVFLYGD------G 217 V+L N G P P L+P IT++ G + ++GD G Sbjct: 168 AFNVILLRYFNPIGAHRSGRIGENPKGIPNNLLPY-ITQVAIGKLPKINVFGDDYDTPDG 226 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV+A+ LK+ E YN+G +DI+ +P Sbjct: 227 TGVRDYIHVVDLAKGHVKAIEK-LKENPGVEIYNLGTGIGYSVLDIIHNFEKACGRKLPY 285 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + RPG D SK K E+GW Q + K +C +++W W+ Sbjct: 286 EVT--------ARRPGDIAECYADCSKAKKELGWEAQYTL-----KDMC---EDSWRWQ 328 >gi|320102634|ref|YP_004178225.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319749916|gb|ADV61676.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 330 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 35/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIG LC L+ +VL +D L+ G+ ++L+ + F F + Sbjct: 1 MRYLVTGGAGFIGGHLCERLIAQGH-EVLALDDLS-TGSFDNLQRLDGHERFEFRCASVL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + ++E Q + + A+ V + + I T + GT ++L SC Sbjct: 59 ERRVVERCVRECQ--GVYHLASAVGVKLVVDQPVKTIETIVGGTEVVLN------SCARY 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHT 174 + L ST EVYG K F+E D P++ Y+ KA ++ LA+ H Sbjct: 111 RRP----VLLTSTSEVYGKSPKVPFAESDDCVMGPTTTRRWAYACAKALDEFHALAYWHQ 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +PV+++ N GP +IP + + + G + +YGDG+ R + +V+D V A Sbjct: 167 ARLPVVIARLFNTVGPRQTGRYGMVIPRFVAQGLAGEPITVYGDGRQSRCFAHVKDVVGA 226 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIED 286 L ++ R GE +NIG + E + + + L LIP ++T + F ED Sbjct: 227 LCGLMDHPRARGEVFNIGNDQEVTILQLAERVRDLTGGRSEIRLIPYHEAYT--VGF-ED 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R D SKI+ IG+ P ++++ L + Sbjct: 284 M----MRRVPDLSKIRRLIGYRPTYDLDAILRDVI 314 >gi|152971031|ref|YP_001336140.1| uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955880|gb|ABR77910.1| uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 334 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S Q+ L Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-NVVGID------NMNDYYDVSLKQARLDRLAYPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLVL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ VL + G YNIG ++ + +D I L +AL Sbjct: 225 EAVVRVLDVIPQANADWTVESGSPATSSAPYRVYNIGNSSPVELMDY---ITALEEALGM 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + I+ PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 282 EAQKNMMPIQ-----PGDVLDTSADTQPLYDLVGFKPQTSVKDGVKNFVDWYKD 330 >gi|328951978|ref|YP_004369312.1| UDP-glucuronate 5'-epimerase [Desulfobacca acetoxidans DSM 11109] gi|328452302|gb|AEB08131.1| UDP-glucuronate 5'-epimerase [Desulfobacca acetoxidans DSM 11109] Length = 335 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 54/352 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 ++++TG AGFIG+ L + LV Q++ ID L Y L + LK I + N F F+++ Sbjct: 3 KILITGAAGFIGAHLAQRLVQQGD-QIIGIDNLNDYYDPQLKIDRLKMIERGN-FEFIKL 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D+ + + D +VN AA++ V S+ ++ +N+ G +LE C Sbjct: 61 DLADKRGMADLFARHRFDMVVNLAAQAGVRYSLANPYAYVESNVFGFLNILE------GC 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLA 170 Q K + S+ VYG+ + +MP+ +P S Y+ATK +++ + Sbjct: 115 RHQQVK---HLVFASSSSVYGA------NTNMPFSVHQNVDHPMSLYAATKKANELMAHT 165 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + YG+P YGP+ P+ + L ++ G+ + ++ G+ RD+ Y++D Sbjct: 166 YASLYGLPTTGLRFFTVYGPWGRPDMALFLFTRAILSGTPLDVFNYGKMQRDFTYIDDIG 225 Query: 231 RALYLVLK---------KGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + VL +G + YNIG NN +++++ I + DAL Sbjct: 226 EGVRRVLDHLPEPNPRWRGDNPDPASSYAPYKLYNIGNNNP---VELMYFINVIEDALGK 282 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ + + +PG D + +G+ PQ +E G+ K + WY Sbjct: 283 KAVKN-----MLPMQPGDVPATYADIDDLMQAVGFKPQTPIEVGIRKFIDWY 329 >gi|92116858|ref|YP_576587.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14] gi|91799752|gb|ABE62127.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14] Length = 339 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG + L+ + + +V+ ID L Y L L+ + + + F F++ D Sbjct: 6 ILVTGAAGFIGFHVAGRLLKEGR-RVVGIDSLNDYYDPALKDGRLEILRKDSRFRFVKAD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + E + +++ AA++ V S+ D ++ +N+ +LE R Sbjct: 65 LADRAATAALFAENRRSVVLHLAAQAGVRYSLQNPDAYVDSNLTAFANVLEGCR------ 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + L S+ VYG+ K FS D +P S Y+ATK S++ + A+ H Y I Sbjct: 119 ---HAECPHLLFASSSSVYGANTKLPFSVRDNVDHPISLYAATKKSNELMAHAYSHLYRI 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P+ YGP++ P+ + ++ G + L+ G RD+ YV+D V A+ ++ Sbjct: 176 PITGLRFFTVYGPWYRPDMALYKFADAIVGGQPIRLFNHGDMRRDFTYVDDVVEAVIRLI 235 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 GE YNIG N + + +V A + K+ T Sbjct: 236 DHVPRGEANWSGDAPDPGTSPAPWRIYNIGNNKPAELMSVV--------AFLEKALGRTA 287 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D + ++G+ P +E G+++ WY Sbjct: 288 QKEMLPMQPGDVQATFADIDDLIRDVGFRPSTPLEDGIHRFAAWY 332 >gi|197285348|ref|YP_002151220.1| nucleotide sugar epimerase [Proteus mirabilis HI4320] gi|194682835|emb|CAR43125.1| probable nucleotide sugar epimerase [Proteus mirabilis HI4320] Length = 335 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 152/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ ++ V+ ID L Y L L +++Q + F F + Sbjct: 1 MKILVTGAAGFIGYHLSQRLI-EMGYHVVGIDNLNDYYDVRLKEARLAKLNQLDNFQFDK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D I + + D +++ AA+ V SI +I NI+G +LE R Sbjct: 60 IDITDSVSIAQLFADHRFDRVIHLAAQPGVRYSIENPMAYIDANIVGHINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG K FS ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HHNVGHLIYSSSSSVYGLNQKQPFSTEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y G RD+ YV+D V ++ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAMLAGEPIDVYNGGNMTRDFTYVDDIVSSVVR 230 Query: 236 VL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ ++G YN+G K +D + I KS + Sbjct: 231 LINIIPQPNPNWTVEQGETSSSSAPYKIYNVGNGQPTKLMDFI--------TAIEKSLNI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G D S + G+ P +E G+ + V WY+D Sbjct: 283 KAKLNLMPMQDGDVLSTCADCSDLAQTTGFSPNTAVEYGVKQFVDWYVD 331 >gi|295084065|emb|CBK65588.1| Nucleoside-diphosphate-sugar epimerases [Bacteroides xylanisolvens XB1A] Length = 344 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 89/358 (24%), Positives = 157/358 (43%), Gaps = 56/358 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQ--------VLVIDKLTYA 37 M+++VTG AGFIGS L L + D++++ +++ D+ + Sbjct: 1 MKILVTGAAGFIGSKLMGVLASRGDEVVGIDSINNYYDVRLKYGRLSEMGIILNDEFVWN 60 Query: 38 GNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 + SL+ F+++ I DR + + + +VN AA++ V SI ++ Sbjct: 61 QPIQSLR----YETCRFIRMSIDDRHAMEELFEREHFEKVVNLAAQAGVRYSITNPYAYL 116 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSP 156 +N+ G +LE C + F S+ VYG K +SE D P S Sbjct: 117 QSNLAGFLNVLE-------CCRHYEVKHLVFA--SSSSVYGLNSKVPYSEEDKVDTPVSL 167 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYG 215 Y+ATK S++ + ++ YG+ V YGP+ P+ + P+ R I G + ++ Sbjct: 168 YAATKKSNELMAHSYSKLYGLAVTGLRFFTVYGPWGRPD-MAPMLFARAISNGEQIKVFN 226 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFL 266 +G +RD+ Y++D V L + ++ YNIG ++ K +D + E Sbjct: 227 NGDMIRDFTYIDDIVEGTIRTLDHVPVTQKSSNGVAYKIYNIGCSHPVKLMDFIHE---- 282 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I + H F+ +PG + D+S +K EIG+ P + G+ K + WY Sbjct: 283 ----IESAMGHEAEKIFLPMQPGDVYQTNADTSMLKKEIGYEPMVTLHDGVAKFIQWY 336 >gi|268608359|ref|ZP_06142086.1| NAD-dependent epimerase/dehydratase [Ruminococcus flavefaciens FD-1] Length = 328 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 28/332 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ +TG GF+G+ + ++LV +L V V+ + A + S+ + + + DI + Sbjct: 7 RVFLTGATGFVGAHMAKHLV-ELGANVTVLIERCDATSYFSICGLDKK--VNIYYGDISN 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + E + + I + AA + D + NI+GT+ +L+ RL + Sbjct: 64 GSLIEQIIVEQKIEVIFHLAAVALQDLAYKMPKVTFQVNIVGTYNILDAARLHTDTVKA- 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 L S+D+VYG D ++E S+PY +K D L ++ H+YG+PV++ Sbjct: 123 ------VLVASSDKVYGDSDVLPYTESTTLQGSNPYDVSKVCQDMLARSFYHSYGLPVVV 176 Query: 182 SNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNV--RDWLYVEDHVRA----L 233 N YGP +F +LIP I ++ G + V RD+LY+ D V A L Sbjct: 177 GRFGNIYGPGDNNF-NRLIPGTIQKLENGESPLVRHPANGVFKRDFLYINDIVNAYMYML 235 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDR 292 Y + K+G G +N G IV ++ ++ IP + +E+ + + Sbjct: 236 YNIDKEGVAGNAFNFGTGIATDIETIVNKLKTIMGCENIPSNVQQSEVSEILMQQ----- 290 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D++K +GW + +++ GL +TV WY Sbjct: 291 ---LDATKAFERLGWKAEYSVDKGLAETVDWY 319 >gi|256959779|ref|ZP_05563950.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Merz96] gi|293384966|ref|ZP_06630801.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis R712] gi|293389237|ref|ZP_06633699.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis S613] gi|312905956|ref|ZP_07764969.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 512] gi|312909302|ref|ZP_07768158.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 516] gi|256950275|gb|EEU66907.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis Merz96] gi|291077784|gb|EFE15148.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis R712] gi|291081401|gb|EFE18364.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis S613] gi|310627951|gb|EFQ11234.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 512] gi|311290326|gb|EFQ68882.1| NAD-binding domain 4 [Enterococcus faecalis DAPTO 516] Length = 319 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ + + + Q+ F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS----MGQVSNLQQNEQLVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LDLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|288916930|ref|ZP_06411302.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288351639|gb|EFC85844.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 338 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 149/335 (44%), Gaps = 41/335 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGF+GS LC L+ + V+ +D G +++ + F D+ Sbjct: 1 MRVVITGGAGFVGSHLCDRLLTEGH-HVICLDNF-LTGRHSNVAHLQSEPRFQLHCQDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D S + + DA+++FA+ S VD E + +GT LE Sbjct: 59 D-----SVEVDGRVDAVLHFASPASPVDYQNFPL-ETLRVGALGTLHTLELA-------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-------PYNPSSPYSATKASSDYLVLAWG 172 +K RF+ ST EVYG D + + P P S Y K S+ L A+ Sbjct: 105 --EKHGARFVLASTSEVYG--DPAVHPQPETYWGNVNPIGPRSMYDEAKRYSEALTTAFR 160 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 T G + N YGP + + IP +T+ + G V + GDG+ R YV+D V Sbjct: 161 ATKGTNTAIIRIFNTYGPRMRQDDGRAIPTFVTQALNGYPVTVAGDGRQTRSVCYVDDLV 220 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + L G G NIG +E +++ + L A +P I F+ RPG Sbjct: 221 EGIVRTLASGVAGP-LNIGNPHEMSVLELARLVIDLCGADVP--------IVFVP-RPGD 270 Query: 291 DRRY-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D D + ++E+GW P ++++GL +T+ W+ Sbjct: 271 DPMVRQPDILRARTELGWNPTVDIQNGLLRTISWF 305 >gi|56420684|ref|YP_148002.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] gi|56380526|dbj|BAD76434.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] Length = 328 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 149/332 (44%), Gaps = 54/332 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + +V+V+D L +E + F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGE-RVVVVDNLQ-----TGHREAVHPDAV-FCQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R ++ +A+++FAA S V S+ ++ N+ GT +LLE R Sbjct: 55 DFLREVFRQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMR---------- 104 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 105 --EFGVKQIVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRS 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + ++++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTTIGEDHNPETHLIPLILKVPLGQREEIYIFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A +L L+K R G + YN+G N GF + +I + H Sbjct: 223 HVLDLVDAHWLALEKLRSGADSDVYNLGNGN-----------GFSVKEVIEAARQVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + RPG R S K K E+GW P+ Sbjct: 272 IPARVVARRPGDPARLVASSEKAKRELGWEPK 303 >gi|15616271|ref|NP_244576.1| nucleotide sugar epimerase (biosynthesis of lipopolysaccharide O antigen) [Bacillus halodurans C-125] gi|10176333|dbj|BAB07428.1| nucleotide sugar epimerase (biosynthesis of lipopolysaccharide O antigen) [Bacillus halodurans C-125] Length = 343 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG + + L+ + V+ ID L Y L + L ++ + F F + Sbjct: 1 MKILVTGAAGFIGMYVAKRLLEEGHF-VVGIDNLNDYYDPQLKNDRLLQLRELGNFEFHK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ +R+ +R + + ++N AA++ V S+ +I +N++G LLE S Sbjct: 60 MDLTERDRLRQLFLDKEITHVINLAAQAGVRYSLKNPHAYIDSNLVGFTNLLE------S 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG+ K F + D +P S Y+ATK +++ L ++ H Y Sbjct: 114 CRELNVK---HLIYASSSSVYGANRKMPFATSDEVNHPVSLYAATKKANELLAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ ++EG + ++ G+ +RD+ Y++D V + Sbjct: 171 HIPTTGLRFFTVYGPWGRPDMAYFSFTKNIVEGQTIKVFNHGEMMRDFTYIDDIVDGVVA 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L++ + YNIG N K +D + + K Sbjct: 231 LLEQPPQADPNWDFEHPMASSSYAPYKIYNIGNNQPVKLMDFI--------ETLEKHLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG + D ++ G+ P +++ GL K V W+ Sbjct: 283 EAKKEFLPMQPGDVQATYADIDDLQQATGFTPSTSIDEGLKKFVDWF 329 >gi|254450981|ref|ZP_05064418.1| NAD-dependent epimerase/dehydratase [Octadecabacter antarcticus 238] gi|198265387|gb|EDY89657.1| NAD-dependent epimerase/dehydratase [Octadecabacter antarcticus 238] Length = 335 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 159/343 (46%), Gaps = 33/343 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF---SFLQVD 58 +++VTG AGFIG LC++L+ + V+ +D +T ++ LKE +NL SF V+ Sbjct: 4 KVLVTGSAGFIGYHLCKHLLAE-GFDVIGLDAMTDYYDVR-LKERRLANLLQSGSFRAVN 61 Query: 59 ICDRECIRSALKEF----QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 DR L + +PD IV+ A ++ V SI +I NIIGTF LLE R Sbjct: 62 --DRLEADGVLMDLVAAEKPDFIVHLAGQAGVRYSIDEPRSYIDANIIGTFNLLEAVR-- 117 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 L ST YG+ + ++E D S Y+ATK S++ + ++ H Sbjct: 118 -------ATPVKHLLLASTSSAYGANTQMPYAETDKADTQMSFYAATKKSNEVMAHSYAH 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP + YGP+ P+ + ++ G + +Y G RD+ YV D VR + Sbjct: 171 LYDIPTTMFRFFTVYGPWGRPDMALFKFTKAILNGDPIDVYNHGDMSRDFTYVTDLVRGI 230 Query: 234 YLVLKKGRIGERYN---IGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRF 283 +L+L + ER + IG + + IG L+D + I ++ F Sbjct: 231 HLLLDA--VPERLDDVPIGDSLSPVAPHRIVNIGNGEPVQLMDFIDAIEEALGQPATKNF 288 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG D + ++ G+ P+ ++ +G+ V WY D Sbjct: 289 MDMQPGDVPATWADCALLQKLTGYTPKTDVVTGVKAFVDWYRD 331 >gi|51892508|ref|YP_075199.1| putative UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] gi|51856197|dbj|BAD40355.1| putative UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] Length = 330 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 24/327 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV--DI 59 +++VTGG GFIGS + + L+ + +V V+ G+L +L E++ V D+ Sbjct: 8 KVLVTGGTGFIGSHVVQALLAE-GARVRVLAHYNGGGHLGNLAELAPQERAEVEVVWGDL 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R A++ + +++ A + S L ++ N+ GT +L +C Sbjct: 67 RDPDSVRRAVQGM--ERVLHLGALISIPYSYLDPRSYVDVNVTGTLNVL------LACRD 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ D +E P SPY+A+K +D L ++ +YG+PV Sbjct: 119 LGVE---RLVHTSTSEVYGTPDTVPIAETHPLRGQSPYAASKIGADKLAESFHRSYGLPV 175 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N YGP LIP +T+ + + L G RD+ YV D +A Sbjct: 176 VTLRPFNAYGPRQSTRALIPTILTQALWAPEIRL-GSLWPRRDYTYVTDTAQAFL----- 229 Query: 240 GRIGERYNIGGN--NERKNIDI-VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 R G + G N D+ V E+ + L + E + R Sbjct: 230 -RAGSAPGVEGMVLNAGYGADVSVQELVEMALRLTGRRVPVVEAAERVRPAASEVARLLC 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D + + +GW PQ +E GL +T+ + Sbjct: 289 DRTLAERRLGWRPQVTLEEGLRRTLAF 315 >gi|115360385|ref|YP_777522.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] gi|115285713|gb|ABI91188.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] Length = 349 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 150/337 (44%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 9 RVLVTGGAGFLGSHLCERLVTSGH-DVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 107 GLAKRVKARILQASTSEVYG--DPDVHPQDEHYCGRVNPIGVRACYDEGKRCAETLFMDY 164 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG+ R + YV+D Sbjct: 165 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGRQTRSFCYVDDM 224 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G E N+G ++E IDI E+ ++ A +P E D P Sbjct: 225 VDALIRLMNEPGDACEPVNLGSDDEIAMIDIAREVVRIVGATVP-----IEFRPLPSDDP 279 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ D +GW + +GL T +++ Sbjct: 280 ---RQRRPDLEVAHRRLGWRATTPLATGLAHTARYFI 313 >gi|146278464|ref|YP_001168623.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] gi|145556705|gb|ABP71318.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] Length = 669 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 52/356 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDIC 60 ++TGGAGFIGS L L++D + +V+++D L AG NL LK L + D+ Sbjct: 320 VITGGAGFIGSNLADALLSDGE-EVILLDNLGRAGVEDNLRWLKARHGDRLHPVI-ADLR 377 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A ++ ++ + A ++ V S+ N GT LLE R Sbjct: 378 DERAMAEAARDAA--SVYHLAGQTAVTTSLDSPVADFEINARGTLNLLEAIRA------- 428 Query: 121 DKKDQFRFLQISTDEVYGSL--------------DKGL----FSEDMPYNPSSPYSATKA 162 L ST++VYG+L D G+ E P +PY +K Sbjct: 429 -TGRPVPLLFASTNKVYGALEDLEMQPGERHVPADAGIGTHGIPETRPLEFCTPYGCSKG 487 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQN 219 +D V+ + ++GIP + S YGP F + + + + ++G + ++GDG+ Sbjct: 488 VADQYVIDYAKSFGIPTAVLRMSCIYGPRQFGTEDQGWVAHFLIQALKGERISVFGDGRQ 547 Query: 220 VRDWLYVEDHVRALYLVLKK---GRIGER-YNIGGNNERKNI--DIVFEIGFLLDALIPK 273 VRD L+V D V A ++++ GRIG R +N+GG E ++ EIG + + Sbjct: 548 VRDVLHVSDAVAAYRRLMEEVGAGRIGGRAFNLGGGPENAVSLRQVLAEIGRITGRAVQV 607 Query: 274 SYSHTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++ ED RPG + D+ + +GW P +SG+ W ++ Sbjct: 608 TH---------EDWRPGDQLWFVADTRALGQAVGWQPTVGWQSGIAALADWLAEHR 654 >gi|319900839|ref|YP_004160567.1| NAD-dependent epimerase/dehydratase [Bacteroides helcogenes P 36-108] gi|319415870|gb|ADV42981.1| NAD-dependent epimerase/dehydratase [Bacteroides helcogenes P 36-108] Length = 343 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 47/348 (13%) Query: 2 RLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSLKEISQ- 48 ++VTG AGFIGS L L +N L +L AG + +EI Sbjct: 8 HILVTGAAGFIGSQLVNALLKQGYNVTGMDNINSYYDTSLKYARLLSAGIVQ--EEIHDG 65 Query: 49 ----SNLFS---FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 S +F F+++D+ DR + + D +VN A + V SI ++ +NI Sbjct: 66 RPVVSTIFPAYRFIKIDLADRVAMERLFENENFDIVVNLAGQPGVRYSIENPYAYVESNI 125 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G +LE R + L S+ VYG D +SED +P S Y+AT Sbjct: 126 LGFLNVLEACRHYAVK---------HLLYASSSSVYGMDDNVPYSEDDKTDHPVSLYAAT 176 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ YGIPV YGP+ P+ L + +++G + ++ G Sbjct: 177 KKSNELMAYAYSKLYGIPVTGLRFFTVYGPWGRPDMAPYLFMKAILDGKSIKVFNHGNLS 236 Query: 221 RDWLYVEDHVRALYLVLK---KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+ Y++D V L L+++ + I R YNIG + K +D + I + Sbjct: 237 RDFTYIDDIVNGLLLLIEHPSEEAIPARVYNIGHASPVKLLDFISAIECVT--------G 288 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H +++ + +PG D S + + G+ P+ +ME G+ C+Y Sbjct: 289 HKAVMQMEDMQPGDVYCTCADVSHLHHDFGYSPEVSMEEGIG---CFY 333 >gi|296166697|ref|ZP_06849122.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897962|gb|EFG77543.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 319 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +VTG AGFIGS L L+ D V+ +D G +L+ ++ + F++ DI Sbjct: 6 VRALVTGAAGFIGSTLVDRLLGDGHT-VVGLDNFA-TGRATNLEHLAGNPSHVFVEADIV 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +++ L E +P+ + + AA+ V S+ + N++GT L E RL Sbjct: 64 TAD-LQAILDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVVGTVRLAEAARLAGV---- 118 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YG+ SED P +P+SPY+A K + + + + H YG+ Sbjct: 119 -----RKIVHTSSGGSIYGTPPHYPTSEDAPTDPASPYAAGKVAGEIYLNTFRHLYGMDC 173 Query: 180 LLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG RD+++V+D V A Sbjct: 174 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGGKTRDYVFVDDVVDAFVKA 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+NIG E + L + + + + F DR G RR + Sbjct: 234 AGDAGGGQRFNIGTGIETSDRQ--------LHSAVAAAVGGPDDPEFHPDRLGDLRRSCL 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + +GW P+ ++ G+ +TV ++ Sbjct: 286 DIGLAERVLGWRPRVALDEGVRRTVEYF 313 >gi|257080888|ref|ZP_05575249.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis E1Sol] gi|256988918|gb|EEU76220.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis E1Sol] Length = 319 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P ++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIREGLQK 308 >gi|256617528|ref|ZP_05474374.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ATCC 4200] gi|256964569|ref|ZP_05568740.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis HIP11704] gi|307272459|ref|ZP_07553712.1| NAD-binding domain 4 [Enterococcus faecalis TX0855] gi|256597055|gb|EEU16231.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis ATCC 4200] gi|256955065|gb|EEU71697.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis HIP11704] gi|306510744|gb|EFM79761.1| NAD-binding domain 4 [Enterococcus faecalis TX0855] Length = 319 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGVEPTLPKRETSMICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|85375481|ref|YP_459543.1| nucleotide sugar epimerase [Erythrobacter litoralis HTCC2594] gi|84788564|gb|ABC64746.1| nucleotide sugar epimerase [Erythrobacter litoralis HTCC2594] Length = 362 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 150/343 (43%), Gaps = 38/343 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQ--SNLFSFL 55 R++VTG AGFIG+ALC L ++ +V ID L Y L + L EI F+F Sbjct: 32 RILVTGAAGFIGAALCVRLASEGH-RVFGIDNLNSYYDPQLKRDRLSEIEAIAGEAFTFS 90 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D DR + L + I + A+ V S+ +I NI+G +LE R Sbjct: 91 QCDFADRASFANCLADLDISRIAHLGAQPGVRYSLENPHAYIEANIVGHLNMLEFAR--- 147 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++ + S+ VYG +K FS +D +P S Y+ATK + + + + H Sbjct: 148 ------ERQVEHLVYASSSSVYGGNEKVPFSVDDRVDHPFSLYAATKKADELMSETYAHL 201 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YGP+ P+ + + +++ G + ++ G+ RD+ +++D V + Sbjct: 202 YRIPQTGLRFFTVYGPWGRPDMMPWIFTAKILRGEPIPVFNHGKMQRDFTFIDDIVSGIV 261 Query: 235 L----------VLKKG---RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 LK G + YNIG N + +D++ A+I ++ I Sbjct: 262 ACLGSPPADDGTLKPGGSTKPHAIYNIGNNRPEQLLDVI--------AIIERACGRKAEI 313 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G R D ++ + G+ P ++ G + V W+ Sbjct: 314 EMLPMQKGDVPRTYADIEAMERDHGYSPTTPVDVGFPRFVEWF 356 >gi|323476656|gb|ADX81894.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus HVE10/4] Length = 306 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 43/334 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +++GGAGF+GS L L + +++V+D + S + F Sbjct: 1 MRFLISGGAGFLGSHLIEQLRDH---EIVVVD------------DFSTAKYFELYSNVKL 45 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +E I + + D +++ AA + E + +N +GT+ LE R Sbjct: 46 IKEKIENFNTNEKFDYVIHLAARPSPEDYTKYPVETMLSNSLGTYRTLEIAR-------- 97 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K ++ S+ EVYG+ + ED P S Y +K S+ L++++ Y Sbjct: 98 --KSDAIYMYTSSSEVYGNAEIIPTPEDYWGKVNPIGIRSCYDESKRFSEALIMSYYREY 155 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V + N YGP + +++ I + ++G + +YGDG+ R +LYVED V Sbjct: 156 GLDVRIQRPFNVYGPRLREDGSYGRVVSRFIYQALKGEDITIYGDGKQTRAFLYVEDWVE 215 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A L ++ KG GE NIG + E + ID L + +I + S ++ IR++ RP Sbjct: 216 ATLKMLFTKGLKGEVINIGSDKETRIID-------LANMIITLTGSKSK-IRYLPPRPDD 267 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A D SK K + W P+ ++E GL KT+ W+ Sbjct: 268 PPRRAADISKAKRLLNWEPKTSLEEGLKKTIEWF 301 >gi|170702756|ref|ZP_02893613.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] gi|170132327|gb|EDT00798.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] Length = 349 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 153/337 (45%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 9 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 107 GLAKRVKARILQASTSEVYG--DPDVHPQDEHYCGRVNPIGVRACYDEGKRCAETLFMDY 164 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG+ R + YV+D Sbjct: 165 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGRQTRSFCYVDDM 224 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G E N+G ++E IDI E+ ++ A +P E D P Sbjct: 225 VDALIRLMNEPGDACEPVNLGSDDEIAMIDIAREVVRIVGATVP-----IEFRPLPSDDP 279 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RR +D + + +GW + +GL T +++ Sbjct: 280 -RQRRPDLDVAHRR--LGWRATTPLATGLAHTARYFI 313 >gi|300920270|ref|ZP_07136716.1| NAD-binding domain 4 [Escherichia coli MS 115-1] gi|56123322|gb|AAV74557.1| Gla [Escherichia coli] gi|300412772|gb|EFJ96082.1| NAD-binding domain 4 [Escherichia coli MS 115-1] Length = 334 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYVSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMATLFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNVLEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 115 ----HNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAI--I 228 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + I E+ YNIG ++ ++++ I L +AL ++ Sbjct: 229 RLQDVIPEKDPQWTVETGSPATSSAPYRIYNIGNSSP---VELMDYINALEEALGIEANK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 286 NMMPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|226326846|ref|ZP_03802364.1| hypothetical protein PROPEN_00706 [Proteus penneri ATCC 35198] gi|225204683|gb|EEG87037.1| hypothetical protein PROPEN_00706 [Proteus penneri ATCC 35198] Length = 336 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 M+ +VTG AGFIG L L+ + V+ ID L ++ SLKE ++Q N FSF Sbjct: 1 MKYLVTGAAGFIGFHLIEKLIQQGET-VVGIDNLNDYYDI-SLKESRLNILNQLNNFSFS 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+ DRE + S + + D +++ AA++ V S++ + +N+ G +LE Sbjct: 59 LIDLADREKMASLFETEKFDKVIHLAAQAGVRYSLINPFSYADSNLTGFLTILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG D+ FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHNNVK---HLVYASSSSVYGLNDELPFSPHDQANHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + +I + +Y +G+ RD+ YVED V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTKAIINDDPIDIYNNGEMKRDFTYVEDIVEGIA 229 Query: 235 LVLK---------KGRIG---------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + K G + YNIG + +D + + L + K+ Sbjct: 230 RIADVIPTPQQDWKVSTGTPANSSAPYKVYNIGNGSPVNLMDYISALETHLGKVADKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + G+ PQ +++ G+ + V WY Sbjct: 288 ------MLPMQPGDVYTTWADTEDLFKATGYKPQTSVDEGVKQFVDWY 329 >gi|193213441|ref|YP_001999394.1| NAD-dependent epimerase/dehydratase [Chlorobaculum parvum NCIB 8327] gi|193086918|gb|ACF12194.1| NAD-dependent epimerase/dehydratase [Chlorobaculum parvum NCIB 8327] Length = 350 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 158/361 (43%), Gaps = 54/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG-NLNSLKE-- 45 M+++VTG AGFIG L L +ND Q + +L ++G + ++++E Sbjct: 1 MKILVTGTAGFIGFHLAERLAQRGDEVVGLDNINDYYDQNVKYGRLAFSGIDRDAIEEGK 60 Query: 46 -ISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++ + + F+++D+ D+ I + Q DA+ N AA++ V S+ D +I +NI Sbjct: 61 LVTSTKYPNYRFIKLDLEDKAAIDALFAAEQFDAVCNLAAQAGVRYSLTNPDAYIKSNIT 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATK 161 G LLE R +K + S+ VYG ++ FS + P S Y+A+K Sbjct: 121 GFINLLEACR-------HNKVGNLSY--ASSSSVYGLNERQPFSVHHNVDHPVSLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H +GIP YGP+ P+ + L +EG + ++ G R Sbjct: 172 KSNELMAHTYSHLFGIPTTGLRFFTVYGPWGRPDMALFLFTKAALEGRPIDVFNYGNMQR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ Y++D + + V+ YNIG N + +D + I Sbjct: 232 DFTYIDDIIEGVVRVIDNPAKSNPNWSGQNPDPGTSSAPYRVYNIGNNEPVRLLDFIEAI 291 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L I K+ + +PG D + + E+G+ P ++ G+N+ V W Sbjct: 292 EKALGKTIEKN--------MLPIQPGDVPSTYADVTDLVEELGYRPATPVQEGINRFVAW 343 Query: 324 Y 324 Y Sbjct: 344 Y 344 >gi|221207870|ref|ZP_03580877.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD2] gi|221172367|gb|EEE04807.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD2] Length = 349 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 9 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 107 GLAKRVKARILQASTSEVYG--DPDVHPQDERYCGRVNPIGIRACYDEGKRCAETLFMDY 164 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG R + YV+D Sbjct: 165 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGTQTRSFCYVDDM 224 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + AL L+ + G E N+G ++E ID+ E+ ++ A +P E D P Sbjct: 225 IDALVRLMDEPGDACEPVNLGSDDEIAMIDVAREVVRVVGATVP-----IEFRPLPADDP 279 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RR +D+++ + +GW SGL T +++ Sbjct: 280 -RQRRPNLDAARKR--LGWRATTPFASGLAHTARYFI 313 >gi|161522484|ref|YP_001585413.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189348641|ref|YP_001941837.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|221198639|ref|ZP_03571684.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD2M] gi|221211840|ref|ZP_03584818.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD1] gi|160346037|gb|ABX19121.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189338779|dbj|BAG47847.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|221167925|gb|EEE00394.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD1] gi|221181090|gb|EEE13492.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Burkholderia multivorans CGD2M] Length = 348 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 106 GLAKRVKARILQASTSEVYG--DPDVHPQDERYCGRVNPIGIRACYDEGKRCAETLFMDY 163 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG R + YV+D Sbjct: 164 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGTQTRSFCYVDDM 223 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + AL L+ + G E N+G ++E ID+ E+ ++ A +P E D P Sbjct: 224 IDALVRLMDEPGDACEPVNLGSDDEIAMIDVAREVVRVVGATVP-----IEFRPLPADDP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RR +D+++ + +GW SGL T +++ Sbjct: 279 -RQRRPNLDAARKR--LGWRATTPFASGLAHTARYFI 312 >gi|331653454|ref|ZP_08354455.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli M718] gi|331048303|gb|EGI20379.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli M718] Length = 334 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYVSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCRY---- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 116 -----NNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAI--I 228 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + I E+ YNIG ++ ++++ I L +AL ++ Sbjct: 229 RLQDVIPEKDPQWAVETGSPATSSAPYRVYNIGNSSP---VELMDYINALEEALGIEANK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 286 NMMPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|300716979|ref|YP_003741782.1| UDP-sugar epimerase [Erwinia billingiae Eb661] gi|299062815|emb|CAX59935.1| UDP-sugar epimerase [Erwinia billingiae Eb661] Length = 335 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L++ QV+ ID L Y NL LK + F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVAERLLSAGH-QVVGIDNLNDYYDVNLKLARLKLLEPHAQFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I ++ + +++ A++ V S+ + N+IG +LE R Sbjct: 60 LDLADREGIAQLFRDQAFERVIHLGAQAGVRYSLDNPLAYADANLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG +K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HNHIGHLLYASSSSVYGLNNKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + M+ G + +Y +GQ RD+ Y++D A+ Sbjct: 171 GIPTTGVRFFTVYGPWGRPDMALFKFTRAMLAGEQIDVYNNGQMRRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + +++G YNIG +N + ++ I L AL + + Sbjct: 231 LQDVIPQANPDWTVEQGSPASSSAPYCVYNIGNSNP---VTLMAYIEALEKALGISAKKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D+ + + IG+ PQ +E G+ V WY Sbjct: 288 -----MLPMQPGDVLETSADTRALFNAIGFKPQTGVEEGIANFVSWY 329 >gi|224541676|ref|ZP_03682215.1| hypothetical protein CATMIT_00848 [Catenibacterium mitsuokai DSM 15897] gi|224525393|gb|EEF94498.1| hypothetical protein CATMIT_00848 [Catenibacterium mitsuokai DSM 15897] Length = 361 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 31/349 (8%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLN----SLKEISQ------SNL 51 ++VTG AGFIGS L L I ++ +D + +++ LKEI + + Sbjct: 11 VLVTGSAGFIGSNLVLELLKTQSPIHIIGLDNMNDYYDVSIKEWRLKEIKKCLKEHSDSS 70 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F + D+ ++ I +E +PD +VN A++ V SI D +I +N+IG + +LE Sbjct: 71 YVFYKDDLANKAIIDHIFEEHKPDIVVNLGAQAGVSYSISNPDAYIQSNMIGFYNILEAC 130 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVL 169 R + ++ L ++ S +K + +ED NP S Y+ATK S++ + Sbjct: 131 RHSYDNGAK----GVEHLVYASSSSVYSTNKKVPYSTEDKVDNPVSLYAATKKSNELMAH 186 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ Y IP YGP P+ ++++G + ++ G RD+ YV+D Sbjct: 187 AYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNKLLKGDTIQIFNYGNCKRDFTYVDDI 246 Query: 230 VRALYLVL------KKGRIG------ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSY 275 + + ++ K G G YNIG +N +D V + + ++P Y Sbjct: 247 LEGVKRIMQGAPEKKNGEDGLPIPPYAVYNIGNSNPENLLDFVTILQEELIRAEVLPADY 306 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+S ++ + G+ P ++ GL K WY Sbjct: 307 DFEAHKKLVPMQPGDVPITYADTSALERDYGFKPNTSLRDGLRKFAEWY 355 >gi|299534518|ref|ZP_07047850.1| putative UDP-glucose 4-epimerase [Lysinibacillus fusiformis ZC1] gi|298729891|gb|EFI70434.1| putative UDP-glucose 4-epimerase [Lysinibacillus fusiformis ZC1] Length = 313 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 30/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG GFIGSA+ R + V +ID L+ G+L ++ +S L + ++ ++C Sbjct: 1 MNVLVTGGYGFIGSAVGRRFFEE-GATVYIIDNLS-TGHLRNVDFEHKSYLLN-VEDEVC 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + KE D +V+ AA++ V +SI I TNI+G +L LS Sbjct: 58 EH-----LFKEINFDVVVHCAAQTSVQQSIQEPVRDILTNIVGLSQML--------FLSS 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K Q F+ S+ VYG E P S Y K+ + W Y +PVL Sbjct: 105 KYKVQ-HFVFASSAAVYGDSHYPPLEESDVCEPISMYGLNKSIGETYCEKWQKDYRLPVL 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N +GP + +IP + + G +YGDG+ RD++YV+D A+Y + Sbjct: 164 IYRFANVFGPRQQMQGEAAVIPSMLKSSMVGKPFTIYGDGEQTRDFIYVDDIADAIYAGV 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 R+ YN+ N + ++ LL L +H I++ R G ++ Sbjct: 224 -SARLQGTYNVSTNEAWS----IHQVILLLQHL-----NHPLEIQYAPAREGDIEHSFLN 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 ++K+ + IGW P+ + G+ +T+ Sbjct: 274 NNKLANAIGWKPKISFAEGIERTL 297 >gi|302341858|ref|YP_003806387.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301638471|gb|ADK83793.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 322 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 163/339 (48%), Gaps = 37/339 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG IGS +C YL+ D +V+ +D G+ ++ + ++ F F+Q I + Sbjct: 3 RILVTGGAGSIGSFVCEYLI-DRGHEVIALDN----GSSRKVEHLFETGRFKFVQDSIMN 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + ++ + D +++ AA + R + + N+ G+ LLE C ++ Sbjct: 58 KDVLERQVQ--RSDIVIHLAAIADPKRYVTEPLNVLNINVKGSIQLLE------LCAAKG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHTY 175 K F ST EV G + F+E+ P YS KA ++ + A+ Sbjct: 110 AKVIF----ASTSEVPGRNTQVPFNEEADRVLGPPSINRWCYSTGKALIEHFLYAYRQQE 165 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +P ++ N YGP ++IP+ + +++ G + ++GDG+ R + ++ED +A Sbjct: 166 NLPFVIMRFFNVYGPRCDDLGQGRVIPIFMEKLLGGQPLTIHGDGKQTRCFTFIEDACQA 225 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDI---VFEIGFLLDALIPKSYSHTELI-RFIEDR 287 + L L G +N+G + E +++ + ++G ++ K H E+ + ED Sbjct: 226 VVELALNPAAEGLCFNVGNDRETSILELAQTLIKVGQFESDIVFK--PHVEVFGKSYEDI 283 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 P R D +IKS I W ++E GL KT+ +Y D Sbjct: 284 P----RRIPDVRRIKSVINWEASTSLEDGLRKTIDFYRD 318 >gi|114777522|ref|ZP_01452503.1| capsular polysaccharide biosynthesis protein I [Mariprofundus ferrooxydans PV-1] gi|114551993|gb|EAU54510.1| capsular polysaccharide biosynthesis protein I [Mariprofundus ferrooxydans PV-1] Length = 407 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 27/341 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 ++++TG AGFIG L + L+ + V+ +D + Y +L L ++S + FSF+++ Sbjct: 72 KVLITGAAGFIGMHLAKRLLQRGDM-VVGLDNMNDYYDVSLKEARLAQLSGYDRFSFVKM 130 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR + E DA+VN AA++ V S+ +I +NI+G +LE C Sbjct: 131 DLADRAGMEKLFVESSFDAVVNLAAQAGVRYSLKNPHAYIDSNIVGFTNILE------GC 184 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG+ + FS D +P S Y+ATK +++ + + H YG Sbjct: 185 RHTGVK---HLVYASSSSVYGANESMPFSVHDNVDHPISLYAATKKANELMAHTYSHLYG 241 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + L ++E + ++ G RD+ YV+D V + V Sbjct: 242 LPTTGLRFFTVYGPWGRPDMALFLFTKAILESKPIDVFNHGDMKRDFTYVDDIVEGVVRV 301 Query: 237 LKKGRIGERYNIGGNNER---------KNIDIVFEIGFL--LDALIPKSYSHTELIRFIE 285 L + G G + + NI +G + ++AL ++ T F+ Sbjct: 302 LDQQATGNPQWDGAHPDPCSSRAPWRVYNIGNSVPVGLMAYIEAL-EEALGMTAEKNFLP 360 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + G D ++ ++G+ P +++ G+ + V WY D Sbjct: 361 LQAGDVPATWADVDELAKDVGYRPSMSVQEGVKRFVQWYRD 401 >gi|322384498|ref|ZP_08058180.1| dTDP-glucose-4,6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150708|gb|EFX44183.1| dTDP-glucose-4,6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 317 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 32/320 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ +VTG +GF+GS + YL L+I V +I + +N L++I ++ ++ Sbjct: 2 VKALVTGISGFVGSHMAEYL---LEIGVDIIGTIRNRSRMNHLEDILSE--IHLIECELR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +PD I + AA+S S + I N+ G + E R Sbjct: 57 DPFSVENLISREKPDLIFHLAAQSFAPTSWNSPIDTIHNNVAGQVNIFEAVR-------- 108 Query: 121 DKKDQFRFLQIS-TDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K+ +QI+ + E YG ++ G +ED P P SPY+ +K + DYL + +YG+ Sbjct: 109 -RKELPCKIQIACSSEEYGQVEPGEVPITEDNPLRPLSPYAISKVAQDYLGYQYHKSYGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIE------GSHVFLYGDGQNVRDWLYVEDHVR 231 ++ + N+ GP EK + + I V G+ Q RD+ V D VR Sbjct: 168 HIIRTRTFNHTGPRRG-EKFVTSNFAKQIAEIEKGIKPPVLYVGNLQAKRDFTDVRDVVR 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGH 290 A +L L+KG GE YNI + I +L+ L+ S E+ + E RP Sbjct: 227 AYWLALQKGEPGECYNIASGS-------CCTIEEMLEVLLSYSSVTIEVKQDPERLRPSD 279 Query: 291 DRRYAIDSSKIKSEIGWFPQ 310 D +K S+ GW PQ Sbjct: 280 VEILLGDYTKFHSQTGWTPQ 299 >gi|312142954|ref|YP_003994400.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] gi|311903605|gb|ADQ14046.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] Length = 314 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 29/333 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ +VTG AGFIGS L L+ + +V+ +D + SLKE + S+ F+ + Sbjct: 1 MKTLVTGAAGFIGSTLTEKLLEE-GYEVIGVDCFIDYYD-RSLKENNMSSFIDHENFTLI 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRL 113 + +I D + ++ LK+ D I + AA++ V RS G D I T NI+GT LLE + Sbjct: 59 EENINDLD-LKELLKDV--DYIFHQAAQAGV-RSSWGEDFEIYTHNNIMGTQRLLEAAK- 113 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + + +F+ S+ VYG D+ E P SPY +K + + L + Sbjct: 114 --------ESNIKKFVYASSSSVYGDTDQLPMQETNRLQPVSPYGVSKLAGENLCYLYYK 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + +P + +G P+ + I +++ + ++GDG+ R++ +V+D V+A Sbjct: 166 NFNVPTVSLRYFTVFGERQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVQDIVKAN 225 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + GE +NIGG+ +R ++ + L++ +I K ++ E + ++ G + Sbjct: 226 ILAAESDAAGEIFNIGGDGKRVVLNDSID---LMEEIIGKK-ANREYQKVVK---GDVKH 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + D+SK K +G+ P+ + E GL + V + D Sbjct: 279 TSADTSKAKEMLGYEPETDFEEGLEREVEFLKD 311 >gi|123968930|ref|YP_001009788.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. AS9601] gi|123199040|gb|ABM70681.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. AS9601] Length = 342 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 38/349 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL----NSLKEISQSNL-----F 52 R+++TG AGFIGSAL L+ + K ++ +D L ++ + LK I++ + + Sbjct: 5 RILITGAAGFIGSALILRLLENEK-TIIGVDNLNNYYDVRLKKSRLKLITEKSKKLKANW 63 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + I D++ + +++ P +++ AA++ V S+ + +N+IG F +LE + Sbjct: 64 IFHEFHIEDKKSLDFITEKYSPSIVIHLAAQAGVRYSLDNPKSYADSNLIGFFNILEFCK 123 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 ++K F F S+ VYG K F ED + P S Y+ATK S++ + ++ Sbjct: 124 -------ENKVKNFVFA--SSSSVYGLNKKIPFVEDDNVDHPISFYAATKKSNELMAHSY 174 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS---HVFLYGDGQNVRDWLYVED 228 H Y IP YGP+ P+ + P+ I S ++F YG+ RD+ Y++D Sbjct: 175 SHLYDIPTTGLRFFTVYGPFGRPD-MAPMIFANAILNSKPINIFNYGNLH--RDFTYIDD 231 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNID----IVFEIG----FLLD---ALIPKSYSH 277 V L+ K I N N + K+ +F IG +D +++ +++ Sbjct: 232 IVNGLFGCCYKPAIKSE-NFSSNYQNKSYSNAPFQIFNIGNSNPIKIDYFISMLELNFNK 290 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +I + +PG + D SKI+ IG+ P+ + E G+ + WYLD Sbjct: 291 KAIINLMPLQPGDVKFTYADISKIQKWIGYKPKVSFEKGIREFSKWYLD 339 >gi|289208996|ref|YP_003461062.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix] gi|288944627|gb|ADC72326.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix] Length = 335 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIGSAL L+ + +V+ +D L ++ SLKE + ++ + Sbjct: 1 MRILVTGSAGFIGSALALRLL-ERGDEVIGVDNLNDYYDV-SLKEARLARTQDHPGYTEV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI DR + +E +P+ +VN AA++ V S+ ++ TN++G +LE R + Sbjct: 59 REDIADRAAMERVFREHRPERVVNLAAQAGVRYSLENPAAYVDTNLVGFGNILEGCRHFG 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG+ FS D +P S Y+A+K +++ + + H Sbjct: 119 VE---------HLVYASSSSVYGANTTMPFSVHDNVDHPLSLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +PV YGP+ P+ + L +++ G + ++ G + RD+ Y++D V + Sbjct: 170 YDLPVTGLRFFTVYGPWGRPDMALFLFTKKILAGEPIDVFNYGHHRRDFTYIDDIVEGVI 229 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L + YNIG + + ++++ I L D L K+ Sbjct: 230 RALDRPARSNPAWTGAEPDSATSAAPYRLYNIGAH---RPVELMHYIEVLEDCLGCKAEK 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D ++++ G+ P ++E G+ + V WY Sbjct: 287 N-----LLPLQPGDVPDTYADVEALRTDTGYEPTTSVEEGVARFVEWY 329 >gi|295098228|emb|CBK87318.1| Nucleoside-diphosphate-sugar epimerases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 334 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGS + + L+ D +V+ ID L Y NL + E+ +S F+F ++ Sbjct: 1 MKFLVTGAAGFIGSHVSKRLL-DAGHEVVGIDNLNDYYDPNLKLARLELLKSESFTFHKL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + +++ AA++ V S+ + N++G +LE R Sbjct: 60 DLADREGMAALFANEKFNRVIHLAAQAGVRYSLENPHAYADANLVGHLNVLEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K Q L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 115 ---HNKVQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLYN 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + MIEG+ + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMIEGNSIDVYNYGKMKRDFTYIDDIAEAIIRL 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG ++ ++++ I L +AL ++ + Sbjct: 231 QDVIPQADTDWTVETGSPATSSAPYRVYNIGNSSP---VELMDYITALEEALGKEAVKNM 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +PG + D+ + IG+ PQ +++ G+ V WY Sbjct: 288 MPI-----QPGDVLETSADTKALYDVIGFKPQTSVKEGVKNFVNWY 328 >gi|229099687|ref|ZP_04230614.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-29] gi|228683757|gb|EEL37708.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-29] Length = 326 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 43/326 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F + D+ D+ Sbjct: 1 MVCGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYKGDLRDKS 53 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +R + DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 54 FLRDVFTQENIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFKV 106 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP----- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 107 DKFIFS--STAATYGEVDVDLITEETVTNPTNTYGETKLAIEKMLHWYSQASNLKYKVFR 164 Query: 179 ---VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVE 227 V + + G H PE LIPL + + + + ++G DG +RD+++VE Sbjct: 165 YFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHVE 224 Query: 228 DHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 225 DLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEVA 276 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 277 PRRAGDPARLVASSQKAKEKLGWDPQ 302 >gi|86748679|ref|YP_485175.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] gi|86571707|gb|ABD06264.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] Length = 338 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNL-FSFLQVD 58 ++VTG AGFIG + + L+ +V+ +D L Y L + +I Q N F+F+++D Sbjct: 6 VLVTGAAGFIGFHVTQQLLAKGS-KVVGLDVLNDYYDPALKRARLDILQRNPDFTFVKLD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR I++ E++ +++ AA++ V SI +I +N+ G +LE R Sbjct: 65 LADRGAIKALFAEYRFAVVIHLAAQAGVRYSIENPYAYIDSNLEGFINVLEGCR------ 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L S+ VYG+ K F+ +D +P S Y+ATK +++ + A+ H Y I Sbjct: 119 ---HNGCRHLLYASSSSVYGANTKLPFAVQDNVDHPISLYAATKKANELMAHAYSHLYRI 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + + + EG+ + L+ G RD+ YV+D A+ ++ Sbjct: 176 PTTGLRFFTVYGPWGRPDMAMFIFAKAITEGAPIKLFNRGMMRRDFTYVDDVSEAIVRLV 235 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 K G YNIG NN + + +V +L+ K + Sbjct: 236 DKPPQGNAAWSGDHPDPASSTAPWKIYNIGNNNPEELLHVV--------SLLEKEFGRPA 287 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + +IG+ P +E G+ WY Sbjct: 288 QKEMLPMQPGDVPATYADVEDLMRDIGFRPSTTIERGVAAFAAWY 332 >gi|253572911|ref|ZP_04850309.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251837543|gb|EES65636.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 350 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/368 (23%), Positives = 163/368 (44%), Gaps = 68/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------------- 47 M+++VTG AGFIGS +C+YL++ D++ N+NS +I+ Sbjct: 1 MKILVTGAAGFIGSYVCKYLLSRG-------DEVVGLDNINSYYDINLKYGRLLTLGIEE 53 Query: 48 ---------QSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE 95 +SN+ F F+++++ D++ ++ + D +VN AA++ V SI Sbjct: 54 NAVNWYLFVESNVYEKFRFIRMNLEDKQAMQMLFANERFDKVVNLAAQAGVRYSIENPYA 113 Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS 154 ++ +NI G +LE R + + S+ VYG K FSE D +P Sbjct: 114 YVESNIDGFLNVLEGCRHYRVK---------HLIYASSSSVYGLNGKVPFSENDSVAHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+ATK S++ + + H Y IP YGP+ P+ L + ++ + ++ Sbjct: 165 SLYAATKKSNELMAHTYSHLYAIPTTGLRFFTVYGPWGRPDMSPFLFASAILNNRPIKVF 224 Query: 215 GDGQNVRDWLYVEDHVRALYLVL------------------KKGRIGERYNIGGNNERKN 256 +G +RD+ Y++D V + V+ + YNIG ++ K Sbjct: 225 NNGDMLRDFTYIDDIVEGVLRVIDHVPEPNLNWNDQNPEPSSSKAPYKIYNIGNSHPVKL 284 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +D + I K+ H + +PG + D++ ++ E+G+ P +++ G Sbjct: 285 MDFI--------EAIEKAIGHPADKIYFPMQPGDVYQTNADTTALERELGFKPNKSIIEG 336 Query: 317 LNKTVCWY 324 + T+ WY Sbjct: 337 VRNTIDWY 344 >gi|215919056|ref|NP_819864.2| capsular polysaccharide biosynthesis protein [Coxiella burnetii RSA 493] gi|206583941|gb|AAO90378.2| UDP-N-acetylglucosamine 4-epimerase [Coxiella burnetii RSA 493] Length = 339 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 119 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLF 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 176 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 235 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN + F+ A++ K+ + Sbjct: 236 TLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNP------ILLTNFI--AILEKTLNK 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 288 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 335 >gi|330684676|gb|EGG96378.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus epidermidis VCU121] Length = 309 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 30/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS + + + + I+V VID L+ G + ++ + + F Q DI Sbjct: 1 MKALITGGAGFIGSHIAQKCIQN-NIEVHVIDNLS-TGRIENIPFVKKE---YFYQEDIN 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +K+ + D +++ AA V ++ NI T +LE RL S + Sbjct: 56 NLKFVSDLIKKERFDYVIHLAAMVSVVETVQQPGRSNQVNIDATLNILETLRLQHSNIK- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +FL S+ VYG L+ + +P SPY+ K + + + Y +P + Sbjct: 115 ------KFLFASSAAVYGQLEGLPKAIHSRIDPRSPYAVQKYAGESYAKIYHQLYHLPTV 168 Query: 181 LSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P +I + + YGDG RD++Y++D V A +LV Sbjct: 169 SLRFFNVYGPRQNPYSDYSGVISILNHKFNHKETFTFYGDGLQTRDFIYIDDLVEACWLV 228 Query: 237 LKKGRI-GERYNIGGNNER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + G YN+G + K + +FE F + IP Y E+R G + Sbjct: 229 LHNDNVNGNVYNLGTGKQTTLKQMVNIFEQHF--NYSIPYVYD--------EERVGDIKH 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D S I+S +G+ PQ ++E G+ Sbjct: 279 SYADISPIQS-LGFSPQYSVEKGI 301 >gi|32472708|ref|NP_865702.1| UDP-glucose 4-epimerase-like protein [Rhodopirellula baltica SH 1] gi|32443945|emb|CAD73387.1| UDP-glucose 4-epimerase homolog [Rhodopirellula baltica SH 1] Length = 371 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 33/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R +VTG AGFIGS + L+ D +V+ +D L+ + NL E Q + +F++ D Sbjct: 55 RCLVTGAAGFIGSQMVERLL-DAGAEVVALDNLSTGFKHNLTPFLEGPQRDRLTFVEGDA 113 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILG---ADEFITTNIIGTFILLEETRLWWS 116 DR C++ +++ D I +FAA + V RS+ ++ TT+ + L + Sbjct: 114 ADRACVQRSVEGV--DHIFHFAAMASVPRSMREPGMCHDWTTTSTV---------ELLAA 162 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K RF+ ST VYG+ ED P SPY+A K SS+ + + Sbjct: 163 GSAAGVK---RFVLSSTSAVYGNSPYVAKREDDMPAPLSPYAAAKLSSENYCQVFQREFP 219 Query: 177 IPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I ++ N +GP P+ +IP ++ ++ G +YGDGQ RD+++V D A Sbjct: 220 IETVVLRYFNVFGPRQDPKSEYSAVIPRFVSMILSGERPVIYGDGQQSRDFVFVRDVANA 279 Query: 233 LYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G +N+G ++++ + LL+ I + R G Sbjct: 280 NMLAATVADAAGGIFNVGRGQRTTLLELLDTLRELLEGDIQPIHE--------PPRAGDV 331 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+++I+S +G+ P +M GL +++ +Y Sbjct: 332 RDSLADTNQIRSRLGFEPTVDMTEGLRQSIEYY 364 >gi|163848788|ref|YP_001636832.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222526739|ref|YP_002571210.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163670077|gb|ABY36443.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222450618|gb|ACM54884.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 320 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 30/337 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M +VTG AGFIGS L L+ + QV+ D Y+ + +L + Q F+ ++ Sbjct: 1 MTYLVTGAAGFIGSHLVDRLLARGE-QVIGFDNFVDYYSPDRKRRNLAQAMQQPGFTLIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + + ++P + + AA SI + N+ G+ ++L+ R Sbjct: 60 GDIRDPDTVAHIFTRYRPRFVAHLAAMPGPRPSIANPQLYEAVNVGGSLVILDYAR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + + ST VYG ++ F ED + P SPY+ATK +++ L + Y Sbjct: 116 -----RSEVENLVLASTSSVYGKTNRVPFREDDNTDRPLSPYAATKKAAEVLAYTFHSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALY 234 GIP + YGP P+ L + RM+ G + L+ G+N+ RD+ Y++D V + Sbjct: 171 GIPTSVVRFFTVYGPRGRPDMTPYLFVERMVRGQPITLFNGGENLFRDYTYIDDIVSGVI 230 Query: 235 LVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + E +N+G + R+ ++++ +I + K TE Sbjct: 231 NALDRPHPYEIFNLGHSQPVELRRFVNLLEQITGYPAQIEIKPLPATE----------PP 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 YA D++K + + P+ +E GL + WY D + Sbjct: 281 ITYA-DTTKAGQLLDFAPRVAIEEGLARFWAWYCDEH 316 >gi|296117740|ref|ZP_06836324.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306] gi|295969471|gb|EFG82712.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306] Length = 329 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 50/329 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C + + +V +ID + GN ++ +Q+ L ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAATLVEAGHEVTIIDNFS-TGNREAVP--AQATL---VEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L + D +V+FAA S V S+ E+ N++ T LLE R Sbjct: 54 N--VVGDVLGQGGFDGVVHFAARSLVGESVAMPAEYWQHNVVTTLTLLEAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG ++ +E MP P++PY A+K + DY++ ++ YG Sbjct: 104 -ANDVSNLVFSSTAATYGEPEEVPITESMPTQPTNPYGASKLAIDYMITSYAKAYGFGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 N G Y LIP+ I ++ G +F++G DG VRD+++ Sbjct: 163 SLRYFNVAGAYGEIGENREVETHLIPI-ILQVALGHRDKIFIFGDDWDTVDGTAVRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 V D A L L+ GE +N+G G + ++ I+ E+ H Sbjct: 222 VRDLADAHLLALEANVSGEHRIFNLGSGDGYSVKQVIETCREV-----------TGHPIP 270 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S+KIKS++GW P Sbjct: 271 AEVAPRRAGDPATLIASSAKIKSQLGWNP 299 >gi|194336804|ref|YP_002018598.1| NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1] gi|194309281|gb|ACF43981.1| NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1] Length = 337 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M ++VTG AGFIG +C+ L+ +++T NLN +LKE S L Sbjct: 1 MNILVTGAAGFIGFHVCKRLLERG-------ERVTGVDNLNDYYDVTLKEARLSMLTPFE 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F++ DI DR + + + D ++N AA++ V SI ++ +NI+G +LE Sbjct: 54 GFTFVKADISDRAAMEELFGKGKFDGVINLAAQAGVRYSIQNPHSYVESNIVGFLNILE- 112 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 C D K + S+ +YGS + FS D +P S Y+A+K +++ + Sbjct: 113 -----GCRHNDVK---HLVYASSSSIYGSNETMPFSVHDNVDHPLSLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +P YGP+ P+ + L ++ + ++ G++ RD+ +++D Sbjct: 165 TYSHLYNLPTTGLRFFTVYGPWGRPDMALFLFTNAILNNKPIQVFNYGKHRRDFTFIDDI 224 Query: 230 VRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 + L + YNIG +N + +D + + Sbjct: 225 TEGVLRTLDHVAVPNPDWSGLTPDPGTSKAPWRVYNIGNSNPVELMDYI--------KAL 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T + F+ +PG D ++ ++ + P+ + G+ + V WY Sbjct: 277 EEQLGRTAIKEFLPLQPGDVPDTYADVDQLMQDVHYKPETTVPEGIRRFVAWY 329 >gi|320185797|gb|EFW60551.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri CDC 796-83] Length = 334 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG L + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYLSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + + ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMAALFADERFERVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 115 ----HNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAI--I 228 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + I E+ YNIG ++ ++++ I L +AL ++ Sbjct: 229 RLQDVIPEKNPQWAVETGSPATSSAPYRVYNIGNSSP---VELMDYINALEEALGIEANK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 286 NMMPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|323703743|ref|ZP_08115382.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531267|gb|EGB21167.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 99/352 (28%), Positives = 167/352 (47%), Gaps = 53/352 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + R L +VLV+D L G+L+++ + F+ DI Sbjct: 1 MHILVCGGAGYIGSHVVRQLQRS-GYEVLVLDNLA-NGHLSAIGDTP------FVWGDIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ ++ + + DA+++FAA S V S+ + N+ GT LLE + + Sbjct: 53 DKRDLQLVFHQNRIDAVMHFAAFSIVGESVQQPSTYYRNNVAGTLNLLE-------AMQE 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ++ F ST VYG + +ED P++PY ATK + + ++ + YG+ + Sbjct: 106 HRVNKLIF--SSTAAVYGEPKEIPITEDHQTKPTNPYGATKLAVEEMLKWFSQAYGLKYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S + G H PE LIPL + T + V ++G DG +RD++ Sbjct: 164 SLRYFNAAGADDSGDMGEDHNPETHLIPLVLKTALGVLPEVKIFGTDYPTPDGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +V D H+ AL +L G+ YN+G N GF + +I + T + Sbjct: 224 HVNDLANAHILALQSLLSGGK-SAVYNLGNGN-----------GFSVREVIDTAKKVTGK 271 Query: 280 LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNN 328 IR +E R G + KIK E+GW PQ +ME ++ W+ +++ Sbjct: 272 SIRVVETTRRIGDPAVLVASAEKIKRELGWQPQFRDMEQIISTAWHWHYNHS 323 >gi|170742162|ref|YP_001770817.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168196436|gb|ACA18383.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 318 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 152/332 (45%), Gaps = 39/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ +VL +D + G +++ + ++ F L+ DI Sbjct: 10 ILVTGGAGFLGSHLCESLIEQGH-EVLCVDNF-FTGARQNVEHLLKNPRFELLRHDI--- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ + D I N A + + T+++GT + L K Sbjct: 65 ----TSPLYVEVDEIYNLACPASPVHYQFDPVQTTKTSVLGTI----------NVLGLAK 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + LQ ST EVYG + +E P P S Y K ++ L + +G+ Sbjct: 111 RVKAKVLQASTSEVYGDPEMHPQAEHYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQHGL 170 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P+ ++ N YGP P+ +++ + + + + LYGDG+ R + YV+D V+ L Sbjct: 171 PIKVARIFNTYGPRMHPDDGRVVSNFVVQALSNKDITLYGDGRQTRSFCYVDDLVQGLIA 230 Query: 236 VLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDR 292 +++ + N+G E F + L + ++ + S +E++R +D P R Sbjct: 231 LMETDSTVTGPINLGNPGE-------FTVRDLAELVVELTGSRSEIVRRPLPQDDP---R 280 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + K +GW P ++ GL +T+ ++ Sbjct: 281 QRKPDIDRAKKVLGWQPTIDLREGLIRTIEYF 312 >gi|304396116|ref|ZP_07377998.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB] gi|304356485|gb|EFM20850.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB] Length = 335 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 151/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG + + L+ QV+ ID L Y NL L I + F+F++ Sbjct: 1 MNFLVTGAAGFIGFHVSQRLLA-AGHQVVGIDNLNDYYDVNLKHARLNLIKANPGFTFIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + S + + +++ A++ V SI + N+IG +LE R Sbjct: 60 MDLADRDAMASLFGQNRFQRVIHLGAQAGVRYSIENPHAYADANLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHL--LYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-- 233 +P YGP+ P+ + MI G + +Y GQ RD+ Y++D A+ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMIAGEAIDVYNQGQMKRDFTYIDDIAEAIVR 230 Query: 234 ----------YLVLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + I + I K+ Sbjct: 231 LQDVIPQKDDHWTVETGSPATSSAPYRVYNIGNSQPVTLISYI--------EAIEKALGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T + +PG + D+S + IG+ PQ +E G+ K V WY D Sbjct: 283 TANKNLMPMQPGDVLETSADTSALFEAIGFKPQTGVEEGVKKFVDWYRD 331 >gi|222529140|ref|YP_002573022.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] gi|222455987|gb|ACM60249.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] Length = 305 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 34/326 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V V+D L +GN+ ++ S+ F Q+DI Sbjct: 1 MTVLVTGGAGFIGSHIVDKLI-ERGYDVCVVDNLL-SGNVCNINPKSK-----FYQLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + +E + + ++ AA+ V +S+ + + NI+GT LL+ C+ Sbjct: 53 -RDNLEKVFEENKIEYCIHQAAQVSVAKSMEDSYLDCSINILGTVNLLD------YCVKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYI 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM+ V +YGDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPCGEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIYVEDVAEANCIAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KNI + +FEI L L Y + + + RPG Sbjct: 223 ESSVSG-TFNL---STGKNISVNELFEI---LSGL--TGYKKSPVYQ--SKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTV 321 + ++ +K+ G+ PQ ++ GL KTV Sbjct: 272 LSNNLLKNVFGFSPQFSLLEGLKKTV 297 >gi|209523309|ref|ZP_03271865.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328] gi|209496460|gb|EDZ96759.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328] Length = 333 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 45/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG LC++L+ V+ ID L YA +L + + +++ F+F + Sbjct: 1 MKILVTGAAGFIGFHLCQHLLKRGD-TVIGIDNLNDYYAVSLKEDRIAQLTPLEKFTFYK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D+ I+ E Q +A+ + AA++ V S+ +I +N++G +LE R Sbjct: 60 LDLYDKVGIKKLFSEHQFEAVAHLAAQAGVRYSLQNPYAYIDSNLVGFINVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F S+ VYGS FS D P S Y+ATK +++ + ++ H Y Sbjct: 116 ---HHQIPHLVFA--SSSSVYGSNKTVPFSVGDYVDYPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDHVRA 232 IP YGP++ P+ + T+ I + VF YG+ Q RD+ YV+D V Sbjct: 171 NIPTTGLRFFTVYGPWYRPDMAM-FIFTKAILADQAIPVFNYGNMQ--RDFTYVDDVVEG 227 Query: 233 LYLVL----------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + V+ K + YNIG N K +++++ I L + L K+ Sbjct: 228 VIRVIDKIPQPGSNQAEIQGVKTTAPYQIYNIGNN---KPVNLLYLIEVLENVLGKKAQK 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + + +++G+ P +E G+ K V WY Sbjct: 285 N-----LLPMQPGDVPITYANVDSLIADVGFKPSTPIEVGVEKFVAWY 327 >gi|172065660|ref|YP_001816372.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6] gi|171997902|gb|ACB68819.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6] Length = 349 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 150/337 (44%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 9 RVLVTGGAGFLGSHLCERLVTSGH-DVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 107 GLAKRVKARILQASTSEVYG--DPDVHPQDEHYCGRVNPIGVRACYDEGKRCAETLFMDY 164 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG+ R + YV+D Sbjct: 165 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGRQTRSFCYVDDM 224 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G E N+G ++E IDI E+ ++ A +P E D P Sbjct: 225 VDALIRLMNEPGDACEPVNLGSDDEIAMIDIAREVVRIVGATVP-----IEFRPLPTDDP 279 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ D +GW + +GL T +++ Sbjct: 280 ---RQRRPDLEVAHRRLGWRATTPLATGLAHTARYFV 313 >gi|119357538|ref|YP_912182.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides DSM 266] gi|119354887|gb|ABL65758.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides DSM 266] Length = 342 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG +CR L+ D V +D + Y +L + L ++ FSF++ Sbjct: 1 MNVLVTGAAGFIGFHVCRRLL-DRGDSVTGLDNMNDYYDVHLKESRLAQLEPEEAFSFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + D ++N AA++ V S++ +I +NI G +LE R Sbjct: 60 MDLADRAGMEELFDASRFDRVINLAAQAGVRYSLINPYSYIDSNIQGFLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ + FS D +P S Y+A+K +++ + + H Y Sbjct: 116 -----HNGIEHLVYASSSSVYGANESMPFSVHDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + L ++ G + ++ G + RD+ Y++D V + Sbjct: 171 GIPSTGLRFFTVYGPWGRPDMALFLFTEAILAGRPIEVFNFGNHRRDFTYIDDIVEGVLR 230 Query: 236 VLK------------KGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K G YNIG + + ++++ IG L + Sbjct: 231 TLDHPAEPNPDWTGLKPDPGTSRAPWRVYNIGNS---RPVNLMDYIGAL-----ERELGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T F+ +PG D ++ +IG+ P+ +++ G+ + V WY Sbjct: 283 TAEKNFLPMQPGDVPDTYADVDQLIEDIGYKPETSVDEGIRRFVAWY 329 >gi|297529688|ref|YP_003670963.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] gi|297252940|gb|ADI26386.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] Length = 328 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 148/332 (44%), Gaps = 54/332 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + +V+V+D L +E + F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGE-RVVVVDNLQ-----TGHREAVHPDAV-FCQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +R ++ +A+++FAA S V S+ ++ N+ GT +LLE R Sbjct: 55 EFLREVFRQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMR---------- 104 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 105 --EFGVKQIVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRS 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + + ++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTTIGEDHNPETHLIPLILKVPLGQREEISVFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A +L L+K R G + YN+G N GF + +I + H Sbjct: 223 HVLDLVDAHWLALEKLRSGADSDVYNLGNGN-----------GFSVKEVIEAARQVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + RPG R S K K E+GW P+ Sbjct: 272 IPARVVARRPGDPARLVASSEKAKRELGWEPK 303 >gi|332703546|ref|ZP_08423634.1| UDP-glucuronate 5'-epimerase [Desulfovibrio africanus str. Walvis Bay] gi|332553695|gb|EGJ50739.1| UDP-glucuronate 5'-epimerase [Desulfovibrio africanus str. Walvis Bay] Length = 335 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIGS +C L+ +V+ +D LT Y+ L + L ++ F+FL Sbjct: 1 MTVLVTGAAGFIGSHVCEKLLTQGH-EVVGLDNLTPYYSVQLKKDRLAKLLSLKGFTFLP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI +RE E + D +N AA+ V SI + ++ +N++G +LE Sbjct: 60 LDIKEREATARLFAEQRFDYAINLAAQPGVRYSIEHPESYVDSNLVGFGNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG + FS D +P S Y+ATK +++ + + H Y Sbjct: 114 CRHSGVK---HLVYASSSSVYGLNTRMPFSVHDNVDHPISLYAATKKANELMAHCYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ L + + EG + ++ G+ RD+ Y++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPDMSHFLFVKAIFEGKPIQVFNHGKMRRDFTYIDDIVEGVVR 230 Query: 236 VLKK------GRIGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V+ G+R +NIG NN +I++ I + +A+ Sbjct: 231 VMDAIPEPNLAWDGQRPDPGTSPAPYRIFNIGNNN---SIELEEYITAMEEAI-----GK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L +++ +PG + D + +G+ P ++ +G+ K V WY Sbjct: 283 PALRNYVDMQPGDVQATYADVDDLAKAVGFRPTTDIRTGIAKFVEWY 329 >gi|302527969|ref|ZP_07280311.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] gi|302436864|gb|EFL08680.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] Length = 314 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 30/316 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG+GFIG A+ R + V V+D++ Y ++ + D+ D Sbjct: 12 VVVTGGSGFIGRAVVRAF-RERGYPVTVVDRVRYETTDEGVRVVVG---------DLRDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +A++E IV+ AA + V +S+ + N+ T LLE R+ Sbjct: 62 ETREAAVEEGV-GGIVHLAALTSVLKSVELPRDTYAENVAVTQELLELCRV--------- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 ++ RF+ ST+ V G + + D+P P +PY ATKA+ + L+ + Y I Sbjct: 112 REVPRFILASTNAVIGDVGTNTITVDLPTKPLTPYGATKAACEMLLSGYAGAYSITTCAL 171 Query: 183 NCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +N YGP + +P + + V +YG G+ RD ++V+D VRA+ L + G Sbjct: 172 RFTNVYGPGMSHKDSFVPRMMRAALNNEGVRVYGTGEQRRDLVHVDDVVRAIALAYESGY 231 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 G R +G + +++V + + A +P + + G +D S Sbjct: 232 TG-RAIVGAGHSVSVLEMVETVRAVTGAELP--------VEHVPAPAGEMPAVVVDVSAS 282 Query: 302 KSEIGWFPQENMESGL 317 IG+ P+ ++ GL Sbjct: 283 AETIGYRPEISLADGL 298 >gi|308047868|ref|YP_003911434.1| NAD-dependent epimerase/dehydratase [Ferrimonas balearica DSM 9799] gi|307630058|gb|ADN74360.1| NAD-dependent epimerase/dehydratase [Ferrimonas balearica DSM 9799] Length = 333 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + L+ QV+ +D L Y +L L +++ + F F + Sbjct: 1 MKILVTGAAGFIGFYVSSRLLEQGH-QVVGLDNLNDYYDVSLKEARLAQLTAQDNFEFSR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE + + + Q D +V+ AA++ V S+ ++ +N+ G +LE R Sbjct: 60 TDLSDREAMAALFQNHQFDRVVHLAAQAGVRYSLDNPMAYVDSNLTGMVTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q K + S+ VYG K FSE D +P S Y+ATK S++ + + H Y Sbjct: 116 ---QTKVPHLVY--ASSSSVYGMNKKVPFSEADAVDHPISLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ +++ G + +Y G+ RD+ Y++D V + Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMAAFKFTKKILAGEPIDVYNYGKLSRDFTYIDDIVEGVLR 230 Query: 236 VLKK--GRIGER--------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 V++ ER YNIG + + ++++ I L AL ++ Sbjct: 231 VMEAIPSADAERDCDRPDRSTAPYALYNIGNH---QPVELLTFIQTLEKALGVEAN---- 283 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D+ ++ +G+ P ++ GL + WY Sbjct: 284 -LNMMPMQPGDVYTTYADTDNLRDAVGFSPDTSLADGLQRFADWY 327 >gi|161831548|ref|YP_001596860.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii RSA 331] gi|161763415|gb|ABX79057.1| capsular polysaccharide biosynthesis protein [Coxiella burnetii RSA 331] Length = 334 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR +VTG AGFIG L + L+ +L +D L Y NL L ++ + FSF + Sbjct: 1 MRTLVTGCAGFIGFHLTKRLLARGD-HILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + ++ D +V+ AA++ V S+ ++ +N++G +LE Sbjct: 60 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C Q K + S+ VYG+ +K FSE D +P + Y+A+K +++ + ++ H + Sbjct: 114 CRHQSVK---HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ + +Y G+ RD+ Y++D V + L Sbjct: 171 QLPCTGLRFFTVYGPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILL 230 Query: 236 VL------------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K YNIG NN + F+ A++ K+ + Sbjct: 231 TLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNP------ILLTNFI--AILEKTLNK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + F+ +PG D S+++ + + P+ ++ G+ V WYL Sbjct: 283 KAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYL 330 >gi|224369406|ref|YP_002603570.1| IspL [Desulfobacterium autotrophicum HRM2] gi|223692123|gb|ACN15406.1| IspL [Desulfobacterium autotrophicum HRM2] Length = 342 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 30/338 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 +VTG AGFIGS L L+ L QV +D + + NL++++ Q FSF++ D Sbjct: 18 LVTGAAGFIGSNLVETLLK-LDQQVTGLDNFSTGFQHNLDAVEATVTPGQWQRFSFIKGD 76 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD SA D +++ AA V RS+ NI G +L R Sbjct: 77 ICDPSTCESAC--VNQDYVLHQAALGSVPRSVEDPLTTNANNITGFLNMLVAAR------ 128 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ++ YG ED P SPY+ TK ++ + TYG Sbjct: 129 ---NAKVRRFVYAASSSTYGDHPGLPKREDEIGKPLSPYAVTKYVNELYADVFASTYGFK 185 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-- 232 + N +G P +IPL +I+ VF+ GDG+ RD+ Y+++ V+A Sbjct: 186 TVGLRYFNVFGRRQDPRGAYAAVIPLWFASLIKEEEVFINGDGETSRDFCYIDNTVQANL 245 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPG 289 L + + YN+ ER ++ +F ++ + + Y + ++ + + RPG Sbjct: 246 LAALAPDEDAVNRVYNVAFG-ERTTLNQLFS---MIRDRVMERYPNIAGVQPVYRDFRPG 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D S+ K+ +G+ PQ ++ GL+ WY++N Sbjct: 302 DVRHSLADISRAKNLLGYDPQFSVAQGLDLAAEWYMEN 339 >gi|304310698|ref|YP_003810296.1| Capsular polysaccharide biosynthesis protein I [gamma proteobacterium HdN1] gi|301796431|emb|CBL44639.1| Capsular polysaccharide biosynthesis protein I [gamma proteobacterium HdN1] Length = 335 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--------- 51 M+++VTG AGFIGS L L+ D++ N+N ++S + Sbjct: 1 MKILVTGAAGFIGSTLAHRLLARG-------DEVIGYDNINDYYDVSLKHARLDRLRSHA 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 FSF+Q + DR+ + +++QP +VN AA++ V SI ++ N+ G +LE Sbjct: 54 GFSFMQASLEDRKALDDVFRKYQPQRVVNLAAQAGVRYSIENPQAYLDANLQGFLNILEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R K + F S+ VYG+ K FS D +P S Y+ATK +++ + Sbjct: 114 CR-------HHKVEHLVF--ASSSSVYGANTKMPFSVSDTVDHPVSFYAATKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +P YGP+ P+ + L ++ G + ++ G + RD+ Y++D Sbjct: 165 TYSHLYQLPTTGLRFFTVYGPWGRPDMALFLFTKSILAGKPIQVFNHGHHRRDFTYIDDI 224 Query: 230 VRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 + + L + + + YNIG N + ++++ I L D L Sbjct: 225 IEGVVRTLDQVAVPDPDWSGDSPDPATSKAPYRLYNIGSN---RPVELLRYIEVLEDCLG 281 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ ++ + D P D +D+ + +++G+ P +E G+ V WY Sbjct: 282 KKAIKEMLPLQ-LGDVP--DTYANVDA--LINDVGYKPGTPIEEGVRHFVDWY 329 >gi|303257272|ref|ZP_07343286.1| GDP-mannose 4,6-dehydratase [Burkholderiales bacterium 1_1_47] gi|302860763|gb|EFL83840.1| GDP-mannose 4,6-dehydratase [Burkholderiales bacterium 1_1_47] Length = 343 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 158/348 (45%), Gaps = 36/348 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDI 59 ++++TG G +GS +++ + I+V+ + + N+ L + I++ + D+ Sbjct: 3 KILITGFTGQVGSQFADFILENTDIEVIGMMRWQEPMDNVYHLADRINKKDRIKICYADL 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R L+ +PD I + AA+S+ S E + TNIIGT LL+ R S Sbjct: 63 NDVTSLRRLLESERPDYITHLAAQSYPKTSFNIPIETLQTNIIGTANLLDSVR---SIRE 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ S+ EVYG G E+ ++ SSPYS +K +DYL + YG+ Sbjct: 120 SDRSYDPIIHVCSSSEVYGRAKVGSSLDEETTFHASSPYSLSKIGTDYLGRYYAEAYGLK 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDHVRAL 233 ++ + GP F E + I + G V G+ ++VR + D VRA Sbjct: 180 TFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGLQDPVIYVGNLESVRTYQDARDAVRAY 239 Query: 234 YLVLK-----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-- 286 +L+ + K R G+ +NI G F++ ++D LI S + I+ ++D Sbjct: 240 FLLFEAVESGKVRPGDYFNIAGQE-------AFKLNEIIDLLI--GMSTVDGIKVVQDPE 290 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RP D++KI+ I W P E + K +C LD+ WR Sbjct: 291 RLRPIDANYQMFDNTKIRKAINWKP----EIPVKKMLCDLLDH---WR 331 >gi|239827953|ref|YP_002950577.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. WCH70] gi|239808246|gb|ACS25311.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. WCH70] Length = 313 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 26/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQ 56 M+++VTGGAGFIGS L L++ V V+D + +E++ +L + + Sbjct: 1 MKILVTGGAGFIGSHLVAKLLS-FGHNVAVVDNFHPYYSVERKNRQFRELTGGSLPVY-R 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D E + +QPD + + AA V S+L +++ +I T +L+ Sbjct: 59 IDLLDGEKTEELFRRYQPDCVYHLAALPGVPNSLLKPLDYVDYDIKATINVLK------- 111 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTY 175 + + L S+ VYG+ E+M SPY+A K ++ A+ H + Sbjct: 112 --ASGEAGVGHVLFASSSSVYGNQGNVPLKEEMATGEVVSPYAAAKYGAESFCHAYAHLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G V + YGP+ P+ I I ++ + +YG Q RD+ +V+D V + Sbjct: 170 GYQVTIFRYFTVYGPWGRPDMAISKFIRHLLHDEEIVVYGT-QTARDYTFVDDIVNGMVA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L + + +N+G I E LL L +++ T +R+ +R G + Sbjct: 229 ALGRRSGNDVFNLGSGRP-----ITMER--LLQEL--RTHFPTMKVRYAPERKGDVKATW 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P E GL +T+ W Sbjct: 280 ADITKAERAFGYKPSVTFEDGLARTIAW 307 >gi|307138702|ref|ZP_07498058.1| uridine diphosphate galacturonate 4-epimerase [Escherichia coli H736] gi|331642660|ref|ZP_08343795.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli H736] gi|323940883|gb|EGB37071.1| NAD dependent epimerase/dehydratase [Escherichia coli E482] gi|331039458|gb|EGI11678.1| NAD dependent epimerase/dehydratase family protein [Escherichia coli H736] Length = 334 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 155/354 (43%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ + +D + + L Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGMEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ + +PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 285 KN--------MMPIQPGDVLDTSADTQPLYDLVGFKPQTSVKDGVKNFVEWYKD 330 >gi|257057349|ref|YP_003135181.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] gi|256587221|gb|ACU98354.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] Length = 313 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++VTGG GFIG A+ +V V+D+ + + + + + +Q ++ Sbjct: 9 LHVVVTGGCGFIGRAVVAAF-RRRGARVTVVDREPLS--------VHDAGVVA-VQGELT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E A+ D I++ AA + V RS+ + T N+ T LLE R+ Sbjct: 59 DPEVRERAVVPGV-DGIIHLAAVTSVLRSVEMPAKTYTENVAVTHELLELARIHGVP--- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RFL ST+ V G + +ED P +PY ATKA+ + L+ + YG+ Sbjct: 115 ------RFLMASTNAVVGDVGTTTITEDTALRPLTPYGATKAACEMLLSGYAGAYGMATC 168 Query: 181 LSNCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +N YGP + +P + + S V +YGDG+ RD ++++D VR + L + Sbjct: 169 ALRFTNVYGPGMSHKDSFVPRLMRAALNDSGVKVYGDGKQRRDLVFIDDVVRGVELAWDR 228 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 +G R IG ++++ + + IP + + G +D S Sbjct: 229 RHVG-RAIIGAGRSVSVLELIDTVREVTGRPIPAEH--------VPAPGGEMPAVVVDVS 279 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + IG+ P ++ GL T ++LD++ Sbjct: 280 RSAETIGYRPAYSLRDGLAATWRYFLDHH 308 >gi|238895614|ref|YP_002920349.1| uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae NTUH-K2044] gi|238547931|dbj|BAH64282.1| uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 334 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ ++++ I L +AL Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSP---VELMDYITALEEALGM 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + I +PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 282 EAQKNMMPI-----QPGDVLDTSADTQPLYDLVGFRPQTSVKEGVKNFVEWYKD 330 >gi|254445874|ref|ZP_05059350.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] gi|198260182|gb|EDY84490.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] Length = 310 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 36/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGF+GS LC L+ + +V+ +D L + G ++ + + F F + D+ Sbjct: 1 MRILITGGAGFLGSHLCERLLGEGH-EVVCLDNL-FTGRKANIAHLLSNPYFEFARHDVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +F+ D I N A + A + I T+++G +CL Sbjct: 59 DP-------FKFEVDQIYNLACPASPPHYQYNAIKTIKTSVMGAI----------NCLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R Q ST E+YG + +E P S Y K ++ L + Sbjct: 102 AKRLRARVFQASTSEIYGDPVEHPQTEAYWGNVNPIGIRSCYDEGKRCAETLFFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + ++ N YGP +++ I + ++G + +YGDG R + + D + Sbjct: 162 GVDIRIARIFNTYGPRMLANDGRVVSNFIVQALKGEDLTIYGDGSQTRSFCFYSDLIEGF 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ + NIG E F + L +A++ + S ++L+ D P D + Sbjct: 222 IRLMSQDETTGPVNIGNPGE-------FTMLELAEAVLREVGSKSKLVHL--DLPADDPK 272 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S K ++GW P+ +E GL +T+ ++ Sbjct: 273 QRQPDISIAKEKLGWEPKVPLEEGLRETIAYF 304 >gi|257077521|ref|ZP_05571882.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis JH1] gi|294780431|ref|ZP_06745796.1| NAD-binding protein [Enterococcus faecalis PC1.1] gi|307289660|ref|ZP_07569604.1| NAD-binding domain 4 [Enterococcus faecalis TX0109] gi|256985551|gb|EEU72853.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis JH1] gi|294452430|gb|EFG20867.1| NAD-binding protein [Enterococcus faecalis PC1.1] gi|306499474|gb|EFM68847.1| NAD-binding domain 4 [Enterococcus faecalis TX0109] gi|315166193|gb|EFU10210.1| NAD-binding domain 4 [Enterococcus faecalis TX1302] Length = 319 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQVSQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|86156650|ref|YP_463435.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773161|gb|ABC79998.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] Length = 324 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 158/334 (47%), Gaps = 33/334 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 +VTG AGFIG L + L+ + +VL ID + ++ LKE + L F+F ++D Sbjct: 5 LVTGAAGFIGFHLAKALL-ERGDEVLGIDSMVPYYDVR-LKEARLAQLTGRPGFTFERLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + A+V+ AA+ V S+ ++ N+ G +LE C Sbjct: 63 LADRDATARLFERARFGAVVHLAAQPGVRYSLENPHAYVDANVTGFLDVLE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG K F+ D +P S Y+ATK +++ + + H + I Sbjct: 117 HHPVR---HLVYASSSSVYGGNSKVPFAVTDNVDHPVSLYAATKKANELMAYTYSHLFAI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P YGP+ P+ + P+ R I EG + ++ GQ RD+ YV+D V + V Sbjct: 174 PATGLRFFTVYGPWGRPD-MAPMLFARAILEGQPIKVFNHGQMRRDFTYVDDIVEGVIRV 232 Query: 237 LKKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L + YNIG + + ++++ I + +AL K+ EL+ +PG Sbjct: 233 LDRPPAAGVVPPHRLYNIGNS---QPVELLRFIEVMEEALGKKAVR--ELLPM---QPGD 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+++ ++G+ P ++E G+ + V WY Sbjct: 285 VPATFADVSELERDVGFRPATSIEEGVRRFVAWY 318 >gi|225851526|ref|YP_002731760.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] gi|225646301|gb|ACO04487.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] Length = 324 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 55/354 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M++++TGGAG+IGS + + L + K ++LVID L+ K ++ ++ L V D+ Sbjct: 1 MKVLITGGAGYIGSHIVKVL-GEKKYEILVIDNLS--------KGHKEAVIYGDLVVIDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ + K F+PDA+++FAA V S+ ++ N T LL ET L + Sbjct: 52 KNKTALEDIFKRFKPDAVMHFAASIEVGESVKKPLKYYQNNTANTLNLL-ETMLEYGV-- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F+ ST VYG+ K ED P NP +PY +K+ + ++ + G+ Sbjct: 109 ------NKFIFSSTAAVYGTPVKVPIPEDHPINPINPYGQSKSFIEKVLQDLDRSSGLKY 162 Query: 180 LL--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 + ++ G H PE LIPL + T E + ++G DG +RD+ Sbjct: 163 ISLRYFNAAGADPEGRIGESHDPETHLIPLILKTAKGERESIKIFGTDYPTPDGTCIRDY 222 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V+D H+ AL +L G E +N G + G+ + +I + T+ Sbjct: 223 IHVDDLADAHLLALEYLLNGGE-SEVFNCG-----------YGHGYSVREVINTAKKVTD 270 Query: 280 LIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNW 329 + +E+ RPG DS+K+K ++ W PQ +++E + W L+ + Sbjct: 271 IDFKVEEADRRPGDPPVLVADSTKLKQKLNWIPQFDDLEYIIQTAWNWELNKKF 324 >gi|303244407|ref|ZP_07330743.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] gi|302485302|gb|EFL48230.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] Length = 326 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 155/335 (46%), Gaps = 25/335 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 +++TG AGFIG L +YL+ + IQ++ ID L N LKE L ++F++ Sbjct: 6 ILITGSAGFIGFHLSKYLLENYNDIQIIGIDNLNNYYN-PILKEKRNDILKNYENYNFIK 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D + + + LK D I++ A++ V S+ + ++NI+GT + E R Sbjct: 65 MDFSNWHDLVNNLKNKDIDLIIHLGAQAGVRYSLENPWAYESSNILGTLNIYELAR---- 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K + + + S+ VYG K FSED + P S Y+ATK S++ + + H Y Sbjct: 121 -----KLNIEKVVYASSSSVYGGNKKIPFSEDDNVDKPVSLYAATKKSNELMAYTYHHLY 175 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GI + YG Y P+ ++I + +Y G RD+ Y+ D V + Sbjct: 176 GIKMTGLRFFTVYGEYGRPDMAYFKFAKKIISNEPIDIYNYGNMERDFTYISDVVDGINS 235 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +KK E +N+G + K + V LI + + + F+ + G R Sbjct: 236 AIKKDFDYEIFNLGNSRPIKLMYFV--------ELIEQYLNKSAEKNFLPMQDGDVLRTY 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D SK + + + P+ ++E GL + W+L+N W Sbjct: 288 ADLSKSRKLLNYSPKVSIEEGLKRFCNWFLENKEW 322 >gi|229063922|ref|ZP_04200223.1| UDP-glucose 4-epimerase [Bacillus cereus AH603] gi|228716392|gb|EEL68100.1| UDP-glucose 4-epimerase [Bacillus cereus AH603] Length = 330 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 97/363 (26%), Positives = 166/363 (45%), Gaps = 55/363 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFKQESIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 R G R S K K ++GW P+ + V +++ W W K N Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWNPE-------HVNVKTIIEHAWDWHQ-----KQPNG 327 Query: 344 YSK 346 Y+K Sbjct: 328 YAK 330 >gi|254444253|ref|ZP_05057729.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] gi|198258561|gb|EDY82869.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] Length = 304 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 29/293 (9%) Query: 44 KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 +E+ + + F ++ DI + + DA+VN AA + V S+ ++ +N G Sbjct: 29 EELKKRDSFQLVEGDIENLGLLNYLFSNHHFDAVVNLAARAGVRYSMENPHVYLNSNADG 88 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKA 162 T LLE R K D + + ST +Y + F E +P N P SPY+A+K Sbjct: 89 TLNLLECMR---------KSDIKKLVLASTSSLYAGQEMP-FLETLPVNQPISPYAASKK 138 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVR 221 +++ + + H YG V + YGP P+ + PL + I EG+ + LYGDG R Sbjct: 139 AAEVMSYTYHHLYGFDVSILRYFTVYGPAGRPD-MSPLRFIKWIDEGTPITLYGDGSQSR 197 Query: 222 DWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNID---IVFEIGFLLDALIP-KSYSH 277 D+ YV+D R L E N+GG N +I FE A+I + ++ Sbjct: 198 DFTYVDDIARGTISALIDADY-EIINLGGGNNPVSISRMITTFEELLGKKAVIDHQPFNK 256 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 ++++ + ID K K + W PQ + E+G+ KTV WYL+N W Sbjct: 257 SDMMHTWAN---------ID--KAKKLLDWEPQIDFETGMQKTVEWYLENKNW 298 >gi|15077456|gb|AAK83183.1|AF333038_28 putative NDP-glucose 4,6-dehydratase [Streptomyces viridochromogenes] Length = 337 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 33/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS LC L+ + + V +D L+ G + +L ++ F+ L+ D+ + Sbjct: 10 RAVVTGGAGFIGSHLCERLI-ERGLSVTCVDNLS-TGRIANLDALADEERFTLLRADVTE 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +V+ A+ + + E + GT + L Sbjct: 68 PFSVEGPVHH-----VVHLASPASPLDYLALPLETLRVGSAGT----------ENALRLA 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+ ST E+YG + SE P P S Y K ++ L A+ T G Sbjct: 113 VAHGARFVVASTSEIYGDPAEHPQSESYWGNVNPIGPRSVYDEAKRFTEALTAAYARTLG 172 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 ++ N+YGP + +++P I + + G + + G G R YVED VR L Sbjct: 173 ADTGIARLFNSYGPRMRRDDGRVVPTFIDQALAGLPLTINGSGAQTRSLCYVEDTVRGLM 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++ G NIG E I I L + TE ED PG R Sbjct: 233 ALMDSSFPGP-VNIGATGEMTVRQIAEAIAALAGVEL-----RTEFRAPAEDEPG---RR 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++++GW P+ + GL +T+ W+ Sbjct: 284 CPDIETARTKLGWKPEVPLAEGLKRTLLWW 313 >gi|227833287|ref|YP_002834994.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] gi|262184272|ref|ZP_06043693.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] gi|227454303|gb|ACP33056.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] Length = 327 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 142/328 (43%), Gaps = 48/328 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V +ID + GN ++ E ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLVEKGHDVTIIDNFS-TGNREAIPEKAR-----LVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D R L E + +++FAA S V S+ ++ N++ T LL R + Sbjct: 54 D--VAREVLSEGGFEGVLHFAARSLVGESVEAPADYWQHNVVTTLKLLNAMREF------ 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + ST YG + +E MP P++PY A+K + DY++ ++ YG+ Sbjct: 106 ---EVTNLVFSSTAATYGEPAQVPITETMPTQPTNPYGASKLAIDYMITSYAQAYGLGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGDIGENREVETHLIPLVLQVALGHREKIFIFGDDYATADGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D A L L G YN+G G + ++ I+ E+ H Sbjct: 223 RDLAEAHVLALGSNSAGTHRIYNLGSGDGYSVKQVIEACREV-----------TGHPIPA 271 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S KIKSE+GW P Sbjct: 272 ELAPRRAGDPATLVASSDKIKSELGWNP 299 >gi|225849014|ref|YP_002729178.1| CDP-paratose 2-epimerase (CDP-tyvelose 2-epimerase) [Sulfurihydrogenibium azorense Az-Fu1] gi|225644264|gb|ACN99314.1| CDP-paratose 2-epimerase (CDP-tyvelose 2-epimerase) [Sulfurihydrogenibium azorense Az-Fu1] Length = 342 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GF+GS L ++ + ++++ D L G+ +L+ + F F+ D+ Sbjct: 1 MKYLITGGCGFLGSNLAAEVLKRNE-ELIIFDNLYRVGSYANLEWLKTQGEFKFIHGDVR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE I +K +PD I + A + + S+ N GTF LL+ R + Sbjct: 60 NREDIEVLIKNEKPDVIFHLAGQVAMTTSLENPRLDFEVNAWGTFNLLDVVRKF------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 + + S+++VYG L+ F E +P + +PY +K ++ Sbjct: 114 --SPESIVIYSSSNKVYGDLEWVEYEETETRYIAVDFPNRFPESIPLDFRTPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE-----------KLIPLAITRMIEGSHVFL 213 D +L + TYGI ++ S+ YG F K I + +++ E + Sbjct: 172 DQYILDFYKTYGIRTVVFRHSSMYGGRQFSTYDQGWIGWFCLKAIEIKNSKLKEPFTI-- 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 +G+G+ VRD L+ D V + ++ + GE +NIGG E N + E+ +L+ ++ Sbjct: 230 HGNGKQVRDVLHARDMVSLYFKTVENIEKVKGEAFNIGGGIE--NSLSLIELLDVLEKML 287 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ +L R + + D +K K IGW P+ + E G+ V W Sbjct: 288 DIKMNYEKLF----PRKSDQKVFVADITKAKKLIGWQPKVSKEEGIKLMVEW 335 >gi|126733359|ref|ZP_01749106.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. CCS2] gi|126716225|gb|EBA13089.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. CCS2] Length = 336 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 55/351 (15%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-----LQVD 58 +VTG AGFIGS +CR L+ + +V+ +D L+ ++ SLKE ++ L ++ + Sbjct: 5 LVTGAAGFIGSFVCRTLLEE-GWRVIGLDCLSDYYDV-SLKERREAGLMAYDDYRSIHGM 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + S KE +P+ +++ A ++ V SI ++ +NI+GTF LLE R + Sbjct: 63 VEDPGLLMSLFKEEKPNVVIHLAGQAGVRYSIENPRAYLESNIVGTFELLEAARAFAPE- 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST YG+ +EDMPY + S Y+ATK S + + ++ Sbjct: 122 --------HMLLASTSSAYGA------NEDMPYTETDRADHQMSFYAATKKSMESMAHSY 167 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + +PV + YGP+ P+ + + G + +Y +G RD+ YVED V Sbjct: 168 AHLFDLPVTMFRFFTVYGPWGRPDMALFKFTKATLAGDPIDVYNNGDMKRDFTYVEDLVH 227 Query: 232 ALYLVL-------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 A+ L++ G++ + NIG N+ + D + A I Sbjct: 228 AIRLLIDAVPARPADGKVDDGDSLSPVAPFRVVNIGNNDMVQLTDFI--------AAIEA 279 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + ++ + G ++ + G+ P+ +++ G+ V WY Sbjct: 280 AIGKPAIRNYMPMQAGDVPATWANADLLHKLTGYAPKTSVQDGVASFVRWY 330 >gi|153941178|ref|YP_001391977.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|152937074|gb|ABS42572.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|295319993|gb|ADG00371.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. 230613] Length = 305 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L++ + V +ID L+ GN+N++ + ++ + L +I Sbjct: 1 MKILVTGGAGFIGSNLVDKLIS-MGNDVCIIDNLS-TGNINNVNKKARLYINDILDSNIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 59 N------IFKKEKFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + K SH E + E R G + + Sbjct: 224 YNGS-RNLFNIGTGVYTTVKDLA---QMMIDTM--KVQSHIE---YQEVRKGDIEKSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ N++ GL KT+ +Y DN Sbjct: 275 IEKAKVELKWEPKYNLQKGLIKTINYYKDN 304 >gi|70909460|emb|CAJ01808.1| UDP-sugar epimerase [Erwinia amylovora] Length = 335 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 155/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+N QV+ +D L Y NL + L IS F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVAQRLLN-AGHQVVGLDNLNDYYDVNLKTARLALISHHASFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE + + +++ AA++ V S+ + N++G +LE R Sbjct: 60 GDLADREGRAELFRCHRFQRVIHLAAQAGVRYSLENPLAYADANLVGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HNQVEHLLYASSSSVYGLNRKMPFSADDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP + YGP+ P+ + +I G + +Y GQ RD+ Y++D V +++ Sbjct: 171 GIPTSGLHFFTVYGPWGRPDMALFKFTRAIIAGEKIDVYNHGQMRRDFTYIDDIVESVFR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D + + L + K+ Sbjct: 231 LQEVIPQADKDWTVEAGSPATSSAPYRVYNIGNSQPVTLMDYIGALESALGTVADKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ +PG + D S + IG+ PQ +++ G+ + V WY Sbjct: 288 -----MLQMQPGDVVDTSADISALYKAIGFKPQTSVKEGVARFVSWY 329 >gi|314935550|ref|ZP_07842902.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus hominis subsp. hominis C80] gi|313656115|gb|EFS19855.1| NAD-dependent epimerase/dehydratase family protein [Staphylococcus hominis subsp. hominis C80] Length = 316 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 33/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + Y + +V +ID L+ +G L ++ ++ +++ DI Sbjct: 1 MKVLITGGAGFIGSHVAEYFMKH-DTEVHIIDNLS-SGFLKNIPFVNNEHIYI---KDIT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++ Q D +++ AA V +I + NI T +LE R++ + Sbjct: 56 DFEFVTQLIQKEQFDFVIHLAAMVSVVETIEKPELSNRINIDATVNILEAIRIYNPNI-- 113 Query: 121 DKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK F S+ +YG L + P+ P SPY+ K + + + H Y IP Sbjct: 114 -KKVIFA----SSAAIYGHLPDLPKSVEQSKPF-PLSPYAIQKYAGEQYTKIYNHLYQIP 167 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P +I + T+ + S YGDG+ RD++Y++D + AL Sbjct: 168 CTCLRFFNIYGPRQNPTSDYSGVISIMNTKFLNHSTFTFYGDGEQTRDFVYIDDLINALS 227 Query: 235 LVLKKGRI-GERYNIGGNNER--KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 +VL G YN+G + K + FE GF D IP +F R G Sbjct: 228 IVLNTTLTDGFIYNVGTGIQTNLKAVFQSFEHGF--DYHIPY--------QFEAPRLGDI 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + D + +K+ +G+ P+ ++E G+ + + NN Sbjct: 278 KHSCADITPLKA-LGYNPKYSIEEGITAYLTYNKHNN 313 >gi|296103685|ref|YP_003613831.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058144|gb|ADF62882.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 334 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 160/346 (46%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGS + + L+ D QV+ ID L Y NL + ++ +S F+F ++ Sbjct: 1 MKFLVTGAAGFIGSHVSKRLL-DAGHQVVGIDNLNDYYDVNLKLARLDLLKSGNFTFHKM 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ DRE + + + D +++ AA++ V S+ + N++G +LE R Sbjct: 60 ELADREAMAALFASEKFDRVIHLAAQAGVRYSLENPHAYADANLVGHLNVLEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 115 ----HNNVQHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLYN 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + MIEG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMIEGKSIDVYNYGKMKRDFTYIDDIAEAILRL 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG ++ ++++ I L +AL ++ + Sbjct: 231 QDVIPQADENWTVETGSPATSSAPYRVYNIGNSSP---VELMDYITALEEALGKEAEKNM 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +PG + D+ + IG+ PQ +++ G+ V WY Sbjct: 288 MPI-----QPGDVLETSADTKALYDVIGFKPQTSVKDGVKNFVDWY 328 >gi|67925079|ref|ZP_00518457.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] gi|67853079|gb|EAM48460.1| NAD-dependent epimerase/dehydratase [Crocosphaera watsonii WH 8501] Length = 332 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 138/333 (41%), Gaps = 37/333 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG AGFIGS LC L++ L +V +D L GN +L+ F+FL D+ Sbjct: 8 LVTGAAGFIGSHLCDRLLS-LGHRVTGLDSLI-VGNPKNLENAKTHPQFTFLHQDVAG-- 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 L+ D I + A + + SI + + +N+ GTF LL +C + K Sbjct: 64 VTPQTLENI--DWIFHLAGLADLVPSIQNPENYYHSNVHGTFALLN------ACRHANIK 115 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 RF+ ++ YG D E P +P PY+ TK + LV+ W Y +P L Sbjct: 116 ---RFVYTASSTCYGIPDTYPTPETYPCSPEHPYALTKYLGEQLVMHWAKVYKLPALSLR 172 Query: 184 CSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP + + + + + G + GDG+ RD+ +V D V A + Sbjct: 173 LFNVYGPRSRTTGAYGAVFGVFLKQKLAGQPFTVVGDGKQTRDFTFVSDVVEAFVKAAQS 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 E N+ + + +V +G I I RPG D + Sbjct: 233 DVTNEIINVCSGQPQSVLRLVELLG--------------GEITHIPKRPGEPDCTWGDIT 278 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K K+ +GW PQ + G V LD+ WR Sbjct: 279 KAKTLLGWEPQVSFPDG----VAQMLDHIELWR 307 >gi|326777759|ref|ZP_08237024.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] gi|326658092|gb|EGE42938.1| dTDP-glucose 4,6-dehydratase [Streptomyces cf. griseus XylebKG-1] Length = 321 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVL-VIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIG L + L + L V+D L+ G+ +L ++ F + D+ Sbjct: 1 MQIVITGGAGFIGCNLVQALAEQPHVTRLRVVDNLS-TGDKANLGDLD----VDFFEGDV 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A + DA+V+ AA V RS+ N GT +LE R Sbjct: 56 QDAALLDQAFRGA--DAVVHLAALPSVPRSLQDPLASHHANATGTLQVLEAAR------- 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYGS E++ P SPY+ TK +++ + A+ H++ +PV Sbjct: 107 --RAGGPHVIAASSSSVYGSNPHLPKHENLATAPMSPYAVTKLTTEAYLSAYRHSFDLPV 164 Query: 180 LLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 L N YGP H +IP I + G V ++GDG RD+ YV R L Sbjct: 165 LPFRFFNVYGPGQRADHPYAAVIPKWINAALSGEPVTIHGDGTQTRDFTYVGTVCRVLTD 224 Query: 236 VLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L + +G R N+ + +D+V EI + ++ + + + R G Sbjct: 225 ALLRRVVGPRPVNLAFGSRTSLLDLVQEIEAAIGHVVKRQH--------VPARIGDVAHS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 DS ++++ ++ G++ T W Sbjct: 277 QADSGRLQALFPRVAPMTLDEGISATADW 305 >gi|239831366|ref|ZP_04679695.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG 3301] gi|239823633|gb|EEQ95201.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG 3301] Length = 325 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 159/347 (45%), Gaps = 44/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M+ IVTG AGFIG + L+ D QV+ ID N+N +LKE S L Sbjct: 1 MKAIVTGAAGFIGFHTAQRLL-DEGWQVVGID------NVNDYYPVALKETRLSKLHMRD 53 Query: 52 -FSFLQVDICDRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F F + DI D + +A+ + D IV+ AA++ V SI +I+ N+ G + E Sbjct: 54 GFRFAKADISDAAALTAAIGSDRDADVIVHLAAQAGVRYSIENPSAYISANVQGQVTVFE 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLV 168 + L +K+ + S+ VYG+ +K FSE P + P S Y+ATK S + L Sbjct: 114 ------TALRLEKRPPVVYA--SSSSVYGANEKVPFSESDPVDHPVSIYAATKRSGELLA 165 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H + + YGPY P+ L + +++G + ++ +G+ RD+ +V+D Sbjct: 166 YSYRHVHKLHSAGLRFFTVYGPYGRPDMAPWLFTSAILKGEPIRVFNNGEMQRDFTFVDD 225 Query: 229 HVRALY-----LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V + ++ K YN+G N D + I + + + +R Sbjct: 226 IVSGVVGAVRRIIDKPEDTAPVYNLGNNRPVMLNDFIAAI---------EKATGKQAVRK 276 Query: 284 IEDRPGHD--RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +E P D R YA D + ++G+ P+ ++ G+ V W+ N Sbjct: 277 LEPMPAADVPRTYA-DITLAARDLGFSPKTTLDQGIPLFVEWFRGYN 322 >gi|229187485|ref|ZP_04314627.1| UDP-glucose 4-epimerase [Bacillus cereus BGSC 6E1] gi|228596006|gb|EEK53684.1| UDP-glucose 4-epimerase [Bacillus cereus BGSC 6E1] Length = 330 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|134045537|ref|YP_001097023.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C5] gi|132663162|gb|ABO34808.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C5] Length = 296 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/331 (28%), Positives = 152/331 (45%), Gaps = 42/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + V ++D L+ GN +L ++ F+ DI Sbjct: 1 MKILVTGGAGFIGSHIVDILIENGH-DVSILDNLS-TGNEKNLNTSAK-----FINGDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ S + +++ AA+ +V++S+ NI+GT +LE+ + + Sbjct: 54 DKTLDLSGF-----ECVIHEAAQINVNKSLSAPMFDAEVNILGTVNILEKMKKYGV---- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK + S VYG + E+ P P SPY ++K ++ + + YGI Sbjct: 105 -KKIIY---SSSGGAVYGEPEYLPVDENHPIKPLSPYGSSKFCAEEYIELYNRLYGIEYC 160 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P +I + I ++ +G +YGDG RD++ V D +A L L Sbjct: 161 ILRYSNVYGERQDPLGEAGVISIFIDKIKKGETPVIYGDGNQTRDFINVRDVAKANLLAL 220 Query: 238 KKGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 G + NIG E + I FE+GF LDA+ K +R G R Sbjct: 221 --GWRNQIVNIGSGRETSVNELFKLISFELGFNLDAIYEK------------EREGEVYR 266 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ID K KS +GW P ++ G+ V + Sbjct: 267 TYIDYKKAKS-LGWIPDVELQDGIKNLVFAF 296 >gi|56122513|gb|AAV74385.1| Gla [Escherichia coli] Length = 334 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYVSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCRY---- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 116 -----NNVQHLLYASSSSVYGMNLKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAI--I 228 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + I E+ YNIG ++ ++++ I L +AL ++ Sbjct: 229 RLQDVIPEKDPQWAVETGSPATSSAPYRVYNIGNSSP---VELMDYINALEEALGIEANK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 286 NMMPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|27381115|ref|NP_772644.1| dTDP-glucose 4-6-dehydratase [Bradyrhizobium japonicum USDA 110] gi|27354282|dbj|BAC51269.1| dTDP-glucose 4-6-dehydratase [Bradyrhizobium japonicum USDA 110] Length = 320 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 45/336 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS +C L+ D +V+ D + G+ ++ + + LF ++ D+ Sbjct: 10 RILVTGGAGFIGSHICERLL-DAGAEVVSADNY-FTGSRRNIAHLIANPLFEAVRHDVTF 67 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + DAI N A + H R + + T++ G + L Sbjct: 68 PLYI-------EVDAIFNLACPASPIHYQRDPV---QTTKTSVHGAI----------NML 107 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + R Q ST EVYG +ED P S Y K ++ L + Sbjct: 108 GLAKRLKARIFQASTSEVYGDPLIHPQTEDYWGNVNPIGIRSCYDEGKRCAETLFFDYWR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+P+ ++ N YGP P +++ I + ++G + ++GDG R + YV+D V Sbjct: 168 QHGLPIKVARIFNTYGPRMQPNDGRVVSSFIVQALQGEPITVFGDGGQTRSFCYVDDLVE 227 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRP 288 A+ L++ K I NIG N+E F I L + +I + S ++L+ +D P Sbjct: 228 AIMRLMVTKEDITGPINIGNNSE-------FTIRELAEKVIELTGSRSKLVFKPLPQDDP 280 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D +K K+ + W P+ +E GL +T+ ++ Sbjct: 281 ---RQRQPDLTKAKTALNWEPKVALEDGLKETIAYF 313 >gi|315427598|dbj|BAJ49197.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 315 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/352 (27%), Positives = 159/352 (45%), Gaps = 58/352 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + + L++ V V+D L+ AG +++ E + +Q D+ R Sbjct: 8 ILVTGGAGFIGSHVVQLLLSKGH-NVTVVDDLS-AGRRSNIPEDVE-----LIQKDV--R 58 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +K+ D +++ AA+ +S+ E N GTF LLE R Sbjct: 59 EIANDDVKD--KDVVIHCAAQVSTFKSVDYPGEDFQRNAEGTFKLLETLR--------KH 108 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F+ S+ V+G++ + E+ PYNPS+ Y+ K + L + YGI ++ Sbjct: 109 NPKALFIYTSSRSVHGNIPSPHIADENWPYNPSTFYNVHKIYGEMLCKIYNGLYGINYVI 168 Query: 182 SNCSNNYGP---------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 SN YGP Y+F I + I+ + +YG G+ +RD+ YVED +A Sbjct: 169 LRPSNVYGPRQPYWAGGWYNF----IAYWFEQAIKNKPIPIYGTGEQIRDYTYVEDTAKA 224 Query: 233 LYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--- 288 L ++ IGE + + IG L+ L K TE +E P Sbjct: 225 YILAMENPAAIGETFLLPTG-----------IGTTLNQLAKKILEITESQAGVEYHPPRK 273 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 G +R+ K + ++GW P N++ GL + W + KEL+P Sbjct: 274 GDIQRFVGTYRKAEQKLGWKPTTNLDQGLKREYEW----------IRKELEP 315 >gi|239834581|ref|ZP_04682909.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG 3301] gi|239822644|gb|EEQ94213.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG 3301] Length = 322 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 147/331 (44%), Gaps = 37/331 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+N+ V+ +D + G L +L+ + + + FSF++ DI + Sbjct: 5 RILVAGGAGFLGSHLCERLLNEGNF-VVCVDNFS-TGRLENLRNLLRYDTFSFVRHDIVN 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I N A + + T++IG+ LLE + Sbjct: 63 P-------IDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHY------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 Q R Q ST EVYG E + P S Y K S++ L + YG Sbjct: 109 ---QARIFQASTSEVYGDPQTHPQPEAYWGNVNSFGPRSCYDEGKRSAETLFYDFHKQYG 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P+ +++ I + ++ + +YGDG R + YV+D + + Sbjct: 166 VDIRIVRIFNTYGPRMRPDDGRVVSNFIVQALKREDITIYGDGSQTRSFCYVDDLIEG-F 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 L ++ + N+G E F + L + +I + S + ++ P D R+ Sbjct: 225 SRLMNSQVRKPVNLGNPGE-------FTVRELAEQIIALTGSSSRIV--YRPLPTDDPRQ 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K E+GW PQ + GL +T+ ++ Sbjct: 276 RRPDIMLAKRELGWEPQIALVEGLKQTIAYF 306 >gi|312113190|ref|YP_004010786.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311218319|gb|ADP69687.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 341 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 49/356 (13%) Query: 1 MRLIVTGGAGFIGSALCRYL------VNDLKIQVLVIDKLTYAGNLNSLKEIS---QSNL 51 M+++VTG AGFIG + R L V + D L L E S +S Sbjct: 1 MKILVTGTAGFIGFHVARTLLARGADVVGFDVVNAYYDPSLKERRLELLAEASRAPESGS 60 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F++ ++ D+ + SA + D ++ AA++ V S+ +++ +NI+ +LE Sbjct: 61 FTFIRANLADQAAVNSAFAAHRFDRAIHLAAQAGVRHSLTHPHDYVQSNIVAFTNILEAC 120 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R D ST VYG+ FSE + + P Y+ATK +++ + A Sbjct: 121 R---------HNDTPHLTYASTSSVYGANTAMPFSEHVGVDHPLQFYAATKRANELMAHA 171 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H + +P YGP+ P+ + L ++ G + L+ G + RD+ YVED Sbjct: 172 YSHLFRLPTTGLRFFTVYGPWGRPDMALFLFTKAILAGEPIKLFNHGHHTRDFTYVEDIA 231 Query: 231 RALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDAL 270 ++ I E +NIG N + ++ V A Sbjct: 232 EG--VIRASDSIAEPNPDWSSDRPDPATSNAPFRIFNIGNNQPVRLMEYV--------AA 281 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ T + + +PG D S+++ +G+ P + G+++ V WY D Sbjct: 282 LEEALGRTAQVELLPLQPGDVPDTFADVSRLERAVGYKPATPVNEGVSRFVAWYRD 337 >gi|164665164|gb|ABY66025.1| glucuronic acid decarboxylase [Actinomadura madurae] Length = 328 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 146/338 (43%), Gaps = 30/338 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG+GFIG+ L LV +V V D + S +E ++ D Sbjct: 3 RALVTGGSGFIGAHLVDRLVARGD-EVTVFDAVPSRDGRGSPREHARHVTGDVRAADALA 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I+ + D + + AA VDR + + I N++GT +LE Sbjct: 62 -EVIKPGV-----DVVYHLAAIVGVDRYLTRPLDVIDINVLGTRNVLELA---------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSED--MPYNPSSP----YSATKASSDYLVLAWGHTY 175 + R L ST EV+G + ED P++ YS++KA ++++ A+G + Sbjct: 106 ARAGARVLVASTSEVFGKNPAVPWGEDGDRVLGPTTADRWTYSSSKALAEHMTFAFGRQH 165 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR-ALY 234 G+ + N YGP P ++ ++ R + G +Y G R + YV+D V AL Sbjct: 166 GLESRVVRFFNVYGPRQRPAYIVSRSVHRALNGVPPVVYDRGGQTRCFTYVDDAVEGALL 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFL--LDALIPKSYSHTELIRFIEDRPGHDR 292 G +NIG +E ++V + L ++A + + +L ED P Sbjct: 226 AAGNPAAAGYAFNIGTTDETTVAEVVALVNKLAGVEATPLQVDTAEKLGPVYEDLP---- 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R D+ + +GW P +E GL +T+ W N WW Sbjct: 282 RRVPDTVRAAGLLGWRPGTGLEDGLTRTIEWARANPWW 319 >gi|312900235|ref|ZP_07759547.1| NAD-binding domain 4 [Enterococcus faecalis TX0470] gi|311292596|gb|EFQ71152.1| NAD-binding domain 4 [Enterococcus faecalis TX0470] Length = 319 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQARQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|253682392|ref|ZP_04863189.1| UDP-glucose 4-epimerase [Clostridium botulinum D str. 1873] gi|253562104|gb|EES91556.1| UDP-glucose 4-epimerase [Clostridium botulinum D str. 1873] Length = 331 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 16/333 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L LV +L V + + N + + N+ ++V D Sbjct: 7 KVLVTGAEGFIGSHLTERLV-ELGADVTALVQYNSFNNWGWIDTFDK-NIKDSIKVITGD 64 Query: 62 -RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE + I++ AA + S L ++ TN+ GT +LE R Sbjct: 65 VREYDNVKRMVSGQEVIMHLAALIAIPYSYLSPMAYVRTNVEGTTNILEACR-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++K+ + + ST E YG+ E P SPYSA+K +D + ++ ++ +P+ Sbjct: 117 EEKNIEKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIGADKMAESFYKSFNLPIA 176 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 177 TIRPFNTYGPRQSARAVIPTIISQILAGKREIKLGSLTPTRDFNYVKDTAEAFVKIAESD 236 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 + IGE N G N E D V +I L+ + K E IR ++ +R +A D++ Sbjct: 237 KTIGEVINAGSNYEISIGDTVKKIIKLIGHDV-KVLCDEERIR--PEKSEVNRLWA-DNT 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK+ W P+ +++ GL +T+ W +N +++ Sbjct: 293 KIKNLTDWTPKYSIDEGLAETIEWIKNNMQYFK 325 >gi|170586980|ref|XP_001898257.1| dTDP-glucose 4,6-dehydratase [Brugia malayi] gi|158594652|gb|EDP33236.1| dTDP-glucose 4,6-dehydratase, putative [Brugia malayi] Length = 152 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 1/141 (0%) Query: 185 SNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGE 244 +N YGP KLIP I +EG L GDG + R+W+YV+D A+ V ++GRIGE Sbjct: 5 NNVYGPNQTLSKLIPKFILLAVEGKSYPLMGDGMHKRNWIYVDDCTNAIGRVCERGRIGE 64 Query: 245 RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 YNIG E N D+ I +++ L+ ++ + + + DRP HDRRY ID +KI E Sbjct: 65 IYNIGTEFEITNYDVTMLIHQIVNELLKRNNTSPQF-EPVMDRPYHDRRYCIDFTKITRE 123 Query: 305 IGWFPQENMESGLNKTVCWYL 325 + W + GL KT+ YL Sbjct: 124 LNWKSITPFKDGLRKTIKHYL 144 >gi|229008630|ref|ZP_04166042.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] gi|228752635|gb|EEM02251.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] Length = 304 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + +L+ + I +V+D L N +++ F DI Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLEN-NIDTVVVDNLVTGHKYNIPSKVA------FYHFDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E +PD +++ AA+ V S+ + N++ T +L+ +C+ Sbjct: 54 DPNIDKIFMVE-KPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQ------ACIKY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + ST VYG+ E+ NP S Y +K +S+ + + YG+ Sbjct: 107 NVK---KIIYASTAAVYGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P+ +I + + R+ + +YGDG RD+++V+D A +L Sbjct: 164 ILRYSNVYGARQNPDGEAGVISIFMDRLFKNDSPIVYGDGNQTRDFIFVKDVAHANFLAF 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + NI N + + LLD + + I + E+RPG + Sbjct: 224 RNAD-NQICNISSNQQ-------ISVNELLDTICNLMKIEDKRI-YKEERPGDVIHSYLS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + + W P+ ++ GL +T+ ++ Sbjct: 275 NDKARKYLNWHPKFSLLQGLRETISFF 301 >gi|163849703|ref|YP_001637746.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661308|gb|ABY28675.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 363 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 148/333 (44%), Gaps = 43/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+G+ L L + + VLV D LT G +L +++ + + V R Sbjct: 12 VLVTGGAGFVGANLADQLAAEGQT-VLVYDALTRPGVEANLTWLTERHGARIVPVIADIR 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + AL + A+ +FAA+ V S+ E + N+ GT LLE R + Sbjct: 71 DGAELALAVREAGAVFHFAAQVAVTTSMTAPWEDMEVNLGGTLTLLEALRA--------R 122 Query: 123 KDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPS------------------SPYSATKAS 163 + L ST++VYG L D L E Y P+ +PY +K + Sbjct: 123 RSAVPLLFASTNKVYGGLPDVELAVEGDAYRPTDSNLRAHGVGEDRRLDFHTPYGCSKGA 182 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNV 220 +D VL + +YG+P ++ S YGP + + + R + V LYGDG+ V Sbjct: 183 ADAYVLDYARSYGLPTVVMRMSCIYGPRQMGNEDQGWVAHFLIRALTNRTVTLYGDGRQV 242 Query: 221 RDWLYVEDHVRALYLVLKK-GRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 RD L+V D V A L + R+ G +N+GG +N ++ +G LL + Sbjct: 243 RDILHVRDAVAAYRAALARIDRVAGRAFNLGGGPDNAVSLRGLIAHLGTLLGREVG---- 298 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 I RPG R Y D+ + S +G P Sbjct: 299 ----IETGAWRPGDQRYYVSDTRRAASMLGLEP 327 >gi|86157488|ref|YP_464273.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773999|gb|ABC80836.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-C] Length = 352 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 46/349 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVD 58 R++V GGAGFIG+ L L++ +V ++D L G NL L+ + + + D Sbjct: 5 RVLVVGGAGFIGANLAHRLLS-AGTRVRLLDSLARPGVERNLAWLRA-THGDRLEVIAGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + A++ A+ + AA+ V S++ + N GT +LE R Sbjct: 63 VRDPGAVARAVEGAA--AVFHLAAQVAVTTSLVDPVQDFEVNARGTLNVLEAVR------ 114 Query: 119 SQDKKDQFRF-LQISTDEVYGSLDKGLFSED----MPYNPS--------------SPYSA 159 ++D F L ST++VYG+L+ L + P +P SPY Sbjct: 115 ---RQDPPPFVLFTSTNKVYGALEDVLLEDAGQRYAPVDPGLHRGISEARNLAFHSPYGC 171 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGD 216 +K +++ VL W TYG+P + S YGP+ F + + + + + + LYGD Sbjct: 172 SKGAAEQYVLDWARTYGVPATVFRMSCIYGPHQFGTEDQGWVAHFLIQAMARRPITLYGD 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+VED + A ++ R G +N+GG E + ++ + + + Sbjct: 232 GKQVRDILFVEDLLDAFLAARERPREVAGRAFNLGGGPE-NTVSLLELLELVEALEGVRP 290 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 E R + R Y D S + GW P+ + G+ + W Sbjct: 291 RVTLEPWRLAD-----QRWYVSDPSAFAALAGWAPRTGVREGVGRLHAW 334 >gi|158313510|ref|YP_001506018.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158108915|gb|ABW11112.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 319 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 39/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAGF+GS LC L+ D + +V+ ID G ++++ + F L+ D+ Sbjct: 1 MRVVVAGGAGFLGSHLCDRLLLDGE-EVVCIDNF-LTGRKSNVEHLLDRPGFELLEQDVA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + DA++ FA+ + E + GT L+ R + Sbjct: 59 ERVEVAGTV-----DAVLEFASPASPLDYARYPIETLKAGAHGTLNTLDLARAKGA---- 109 Query: 121 DKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 RFL ST EVYG ++ + P P S Y K ++ L A+ + + Sbjct: 110 ------RFLLASTSEVYGDPLVHPQEESYWGHVNPIGPRSMYDEAKRFAEALTTAYRNRH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP + + IP +++ + G V + GDG R YV+D V + Sbjct: 164 GLDTAIIRIFNTYGPRMRTDDGRAIPAFVSQALRGEPVTVAGDGMQTRSVCYVDDLVEGI 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-- 291 +L+ G G N+G +E ID + L+ + P I F+ RPG D Sbjct: 224 VRMLRSGLPGP-VNLGNPHEMTIIDTARLVVELIGSDAP--------ITFVP-RPGDDPM 273 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D + + ++GW P ++ GL +T+ W+ Sbjct: 274 VRRP--DITLARQQLGWEPVVDVRDGLVRTIEWF 305 >gi|313206827|ref|YP_004046004.1| naD-dependent epimerase/dehydratase [Riemerella anatipestifer DSM 15868] gi|312446143|gb|ADQ82498.1| NAD-dependent epimerase/dehydratase [Riemerella anatipestifer DSM 15868] gi|315023900|gb|EFT36902.1| UDP-N-acetylglucosamine 4-epimerase [Riemerella anatipestifer RA-YM] gi|325335734|gb|ADZ12008.1| Nucleoside-diphosphate-sugar epimerase [Riemerella anatipestifer RA-GD] Length = 343 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/352 (26%), Positives = 152/352 (43%), Gaps = 47/352 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLV---IDKLTYAGNLNSLKE---------ISQSNL 51 +VTGG+GFIGS L L+ + + V D Y +N+ E NL Sbjct: 7 LVTGGSGFIGSHLVEALLKNGHFVINVDNFDDFYNYKTKINNTLESLGITTNFDFENKNL 66 Query: 52 -------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 + F DI D+E + K +PD +++ AA + V SI E+ Sbjct: 67 DIKKLASLVNKGNYKFYYQDIRDKEGLEKIFKNHRPDVVIHLAALAGVRPSIERPLEYQE 126 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPY 157 NI GT + E + C +F+ S+ VYG+ +K FS ED P SPY Sbjct: 127 VNIKGTMNIWEVAKDLGIC---------KFVIASSSSVYGNNEKIPFSEEDNVDRPISPY 177 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDG 217 +ATK + L + H YG+ ++ YGP P+ I + + V YGDG Sbjct: 178 AATKKCVEVLGHTYHHLYGMDMVQLRFFTVYGPRQRPDLAIHKFAKIIKDNKQVPFYGDG 237 Query: 218 QNVRDWLYVEDHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 RD+ +V+D + +++ V + + E +N+G + V + +L + I + Sbjct: 238 NTARDYTFVDDIIDGIMKSIKYVEENAGVYEIFNLGESE-------VIPLHKML-STIEE 289 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + + G ++ D K + +IG+ P N ++G+ K V W+L Sbjct: 290 ELGVKATLNKLPMQAGDVQKTNADIRKAQQKIGYAPTTNFQNGIKKFVEWFL 341 >gi|197124801|ref|YP_002136752.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|196174650|gb|ACG75623.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] Length = 343 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 158/338 (46%), Gaps = 32/338 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFL 55 R +VTGGAGFIGS L + L++ L+ V+V+D L+ G+L++L + ++S +F+ Sbjct: 18 RWLVTGGAGFIGSHLVQKLLS-LRQDVIVLDDLS-TGHLSNLDDATKSVREDLRGTLTFI 75 Query: 56 QVDICD-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DI D C+R+ D +++ AA V RS+ N+ G + Sbjct: 76 KGDIRDLATCLRACAGV---DLVLHQAALGSVPRSLKDPRTSHDVNVTGAMNVF------ 126 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L+ R + S+ VYG ED SPY+ TK +++ +G Sbjct: 127 ---LAARDSGARRLVYASSSSVYGDHPALPKVEDQVGKQLSPYAVTKYANELYAHVFGQA 183 Query: 175 YGIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ ++ N +GP P ++P ++ G+ V + GDG+ RD+ YV + V Sbjct: 184 YGLELIGLRYFNVFGPRQDPNGPYAAVMPQWFAGLLSGTEVVINGDGETTRDFCYVANAV 243 Query: 231 RALYLVLK---KGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIED 286 +A L + +G YN+ + +++ +FE I + + P++ + + + Sbjct: 244 QANLLAATTSDREAVGRTYNVACGAQ-TSLNTLFELIRTEVARVRPEAANASPAYKPF-- 300 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RPG R + + ++ +G+ P ++ +GL + WY Sbjct: 301 RPGDIRHSLANVDRARALLGYVPTHDVAAGLREAAAWY 338 >gi|328952853|ref|YP_004370187.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] gi|328453177|gb|AEB09006.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] Length = 335 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 149/341 (43%), Gaps = 32/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 R++VTG GFIGS L L+ L QV + + L E+ +L L+V D Sbjct: 13 RVLVTGAGGFIGSHLTESLLQ-LGAQVRALVHYNSRSDWG-LLELIHPDLRGQLEVMAGD 70 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D C A+ + + + + AA + S + ++T N GT LLE R Sbjct: 71 IIDPFCAFRAMADCE--IVFHLAALIAIPYSYIAPANYVTVNCGGTLNLLEAAR------ 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ ST E YG+ E+ P SPYSA+K +D L ++ ++G P Sbjct: 123 ---QHRVRRFVHTSTSETYGTARYTPIDEEHPLKGQSPYSASKIGADKLAESYFLSFGTP 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V N YGP +IP I++ + G+ + L G +RD +V D V V + Sbjct: 180 VSTIRPFNTYGPRQSARAVIPTIISQGLSGNIIRL-GSLTPLRDLNFVSDTVAGFLKVAE 238 Query: 239 K-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPGHDRRY 294 +G+ N+G IG L +I + E+I ED RP Sbjct: 239 SDAAVGQVINVGSGKS-------VSIGQLAYMIITLLGGNKEII--CEDQRVRPEASEVM 289 Query: 295 AI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + D SK K+ + W P ++E GL+ T+ + +N ++P Sbjct: 290 ELLCDYSKAKALLDWEPMISLEEGLSHTIAFIRENLGQYKP 330 >gi|206970295|ref|ZP_03231248.1| UDP-glucose 4-epimerase [Bacillus cereus AH1134] gi|206734872|gb|EDZ52041.1| UDP-glucose 4-epimerase [Bacillus cereus AH1134] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G E YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESEFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSKKAKEKLGWDPK 306 >gi|322372069|ref|ZP_08046611.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] gi|320548491|gb|EFW90163.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] Length = 303 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 143/320 (44%), Gaps = 31/320 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS L LV + +++L D L+ N +E + ++ DI D Sbjct: 10 VLVTGGAGFVGSHLVDALVQENDVRIL--DDLSTGKRSNVNEEAT------LIEGDIRDS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A + D I + A V +S+ N+ T LLE R + Sbjct: 62 ETLDRATENV--DLIFHEAGVVSVQQSVEEPMRANEVNLDATLALLERARDLDA------ 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ +YG + SED ++PSSPY K++ D+ L + YG+ + Sbjct: 114 ----RVVLASSCAIYGQPTEVPISEDESFSPSSPYGLQKSALDHYALLYEELYGLETVAL 169 Query: 183 NCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP +I + + G + + GDG+ RD+++V+D VRA L Sbjct: 170 RYFNIYGPRQSSGDYSGVISIFKRQATNGDPITVDGDGEQTRDFVHVDDIVRANLLAATT 229 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 +GE YNIG + I L + + S S ++++ + RPG D S Sbjct: 230 EHVGEAYNIGTGDS-------VTIRELAETIRDVSASSSDIVH-TDPRPGDIDESEADIS 281 Query: 300 KIKSEIGWFPQENMESGLNK 319 K ++G+ P ++ GL+ Sbjct: 282 KATEKLGYEPTIPLDEGLSS 301 >gi|229014760|ref|ZP_04171863.1| UDP-glucose 4-epimerase [Bacillus mycoides DSM 2048] gi|228746526|gb|EEL96426.1| UDP-glucose 4-epimerase [Bacillus mycoides DSM 2048] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + L+ D + V+V+D L G+ +++ E ++ F + D+ D+ Sbjct: 4 ILVCGGAGYIGSHAVKKLI-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYKGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 GFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLINEETVTNPTNTYGETKLAIEKMLHWYSQASNLKYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N +IV + + + IP + Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVEAVREVTNHEIPAEVA------- 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 281 -PRRAGDPARLVASSQKAKEKLGWNPQ 306 >gi|90580916|ref|ZP_01236718.1| putative nucleotide sugar epimerase [Vibrio angustum S14] gi|90437987|gb|EAS63176.1| putative nucleotide sugar epimerase [Vibrio angustum S14] Length = 334 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+ ++TG AGFIGSA+ L QV+ ID NLN ++S Q+ L Sbjct: 1 MKYLITGVAGFIGSAITERLCAQGH-QVIGID------NLNDYYDVSLKQARLARIAHPS 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F+++D+ DRE I + E Q + +++ AA++ V SI + +N++G +LE Sbjct: 54 FTFIELDLADREGIANLFAEQQFNRVIHLAAQAGVRYSIDNPLAYADSNLVGNLTILEGC 113 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLA 170 R +K + + S+ VYG K F + D +P S Y+ATK S++ + Sbjct: 114 R-------HNKVEHLVYA--SSSSVYGLNHKTPFNTADSVDHPISLYAATKKSNELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+P YGP+ P+ + ++EG + +Y G RD+ Y++D V Sbjct: 165 YSHLYGVPTTGLRFFTVYGPWGRPDMALFKFTNAIMEGKEIDVYNHGDMRRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + ++ G YNIG + K +D + + L Sbjct: 225 EGVMRIQDVIPQPNADWTVEAGSPATSSAPYRVYNIGHGSPVKLMDYIEALEEALGIEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ F++ +PG D+ + G+ P+ ++ G+ V WY Sbjct: 285 KN--------FMDMQPGDVYMTYADTEDLFKATGYKPEVKVKEGVKAFVDWY 328 >gi|256784301|ref|ZP_05522732.1| nucleotide-sugar dehydratase [Streptomyces lividans TK24] gi|289768183|ref|ZP_06527561.1| nucleotide-sugar dehydratase [Streptomyces lividans TK24] gi|289698382|gb|EFD65811.1| nucleotide-sugar dehydratase [Streptomyces lividans TK24] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 32/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D +V+ +D L G+ ++ ++ + F F++ D D Sbjct: 18 RALVTGGAGFVGSHLCGRLL-DAGTEVVCLDNLA-TGSRANVADLERRRGFRFVRGDATD 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R F D +++FA + + E + GT LE Sbjct: 76 PAALRGLPGRF--DLVLHFACPASPADYLRLPLETLDVGSTGTRNALERA---------- 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 D RFL ST EVYG + E P P S Y +K ++ LV A +G Sbjct: 124 HADGARFLLASTSEVYGDPLEHPQRETYWGNVNPIGPRSVYDESKRFAEALVTAHRQVHG 183 Query: 177 IPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP + +P I + ++G + + GDG R YV+D V + Sbjct: 184 TDTAIVRIFNTYGPRMRTGDGRAVPTFIAQALDGMPLTVAGDGGQTRSLCYVDDTVAGVL 243 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-R 293 + G G NIGG++E +++ + L + IRF+E RP D R Sbjct: 244 ALAASGESGP-MNIGGDDEITMLELARRVVGLTGS--------GSRIRFVE-RPVDDPCR 293 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ + +GW P + GL +T+ W+ Sbjct: 294 RRPDTTLARERLGWRPGVSWNEGLERTIGWF 324 >gi|229076472|ref|ZP_04209434.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-18] gi|228706658|gb|EEL58869.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-18] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F + D+ D+ Sbjct: 4 ILVCGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYKGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFTQENIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETVTNPTNTYGETKLAIEKMLHWYSQASNLKYKVF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPK 306 >gi|269965956|ref|ZP_06180049.1| nucleotide sugar epimerase [Vibrio alginolyticus 40B] gi|269829509|gb|EEZ83750.1| nucleotide sugar epimerase [Vibrio alginolyticus 40B] Length = 335 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ L++ V+ +D + Y NL L I+ S F F++ Sbjct: 1 MKYLVTGAAGFIGAKTIEVLLSK-GASVVGVDNINDYYDVNLKEARLLTINNSERFEFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + Q D +++ AA++ V SI + +N++G +LE Sbjct: 60 MDLSDRQAVADFFANNQFDCVIHLAAQAGVRYSIENPMAYADSNLVGHLNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 114 CRHSKVK---HLVYASSSSVYGLNQKTPFETSDTVDHPVSLYAATKKSNELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + P T+ I EG + + +G RD+ Y++D V + Sbjct: 171 DLPTTGLRFFTVYGPWGRPD-MAPFIFTKKILEGDTIDINNNGDMWRDFTYIDDIVEGIV 229 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + +D + EI L K+ Sbjct: 230 RISEVIPQRNDDWTVESGTPASSSAPYSVYNIGHGSPVNLMDFITEIESALGIEAKKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E +PG + D+S + G+ PQ ++ G+ V WY Sbjct: 288 ------FREMQPGDVYKTYADTSDLFEATGYKPQVGLKQGVQALVDWY 329 >gi|21224504|ref|NP_630283.1| nucleotide-sugar dehydratase [Streptomyces coelicolor A3(2)] gi|4008544|emb|CAA22513.1| putative nucleotide-sugar dehydratase [Streptomyces coelicolor A3(2)] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 32/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D +V+ +D L G+ ++ ++ + F F++ D D Sbjct: 18 RALVTGGAGFVGSHLCGRLL-DAGTEVVCLDNLA-TGSRANVADLERRRGFRFVRGDATD 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R F D +++FA + + E + GT LE Sbjct: 76 PAALRGLPGRF--DLVLHFACPASPADYLRLPLETLDVGSTGTRNALERA---------- 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 D RFL ST EVYG + E P P S Y +K ++ LV A +G Sbjct: 124 HADGARFLLASTSEVYGDPLEHPQRETYWGNVNPIGPRSVYDESKRFAEALVTAHRQVHG 183 Query: 177 IPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP + +P I + ++G + + GDG R YV+D V + Sbjct: 184 TDTAIVRIFNTYGPRMRTGDGRAVPTFIAQALDGMPLTVAGDGGQTRSLCYVDDTVAGVL 243 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-R 293 + G G NIGG++E +++ + L + IRF+E RP D R Sbjct: 244 ALAASGESGP-MNIGGDDEITMLELARRVVGLTGS--------GSRIRFVE-RPVDDPCR 293 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ + +GW P + GL +T+ W+ Sbjct: 294 RRPDTTLARERLGWRPGVSWNEGLERTIGWF 324 >gi|189499921|ref|YP_001959391.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides BS1] gi|189495362|gb|ACE03910.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides BS1] Length = 340 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 159/352 (45%), Gaps = 51/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIG + R L+ + +V+ ID + L+ L+E + F Sbjct: 1 MKVLVTGAAGFIGYTVSRRLL-ERGDEVVGIDNINNYYDPALKESRLDLLREYEK---FR 56 Query: 54 FLQVDICDRECIRS--ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+++D+ DRE + AL++F + +VN AA++ V SI ++ +NI G +LE Sbjct: 57 FVRLDLADREGMEELFALEKF--NRVVNLAAQAGVRYSIENPHSYVESNITGFLHVLEGC 114 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 R + + S+ VYG+ + FS D +P S Y+A+K S++ + Sbjct: 115 R---------QHHVEHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKSNELMAHT 165 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y +P YGP+ P+ + L ++EG + ++ G++ RD+ Y++D Sbjct: 166 YSHLYSMPTTGLRFFTVYGPWGRPDMALFLFTRAILEGKPIKVFNYGKHRRDFTYIDDIA 225 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + L +G YNIG + + +D + + + Sbjct: 226 EGVLRTLDHIPVGNPDWSGLNPDPGSSRAPWRVYNIGNSEPVELMDYI--------SALE 277 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 KS T F+ +PG D +++ ++ + PQ + G+ K V WY Sbjct: 278 KSLGKTAEKEFLPLQPGDVPDTYADVAQLVQDVNYQPQTPVTEGIQKFVDWY 329 >gi|89067504|ref|ZP_01155017.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] gi|89047073|gb|EAR53127.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] Length = 664 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 153/354 (43%), Gaps = 47/354 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQVDIC 60 L+VTGGAGFIGS L +++ + V+V+D L+ G +L+ ++ + + VD+ Sbjct: 319 LVVTGGAGFIGSNLAASFLSEGR-DVVVLDNLSRPGVERNLRWLADRHGDRLHAVPVDLR 377 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R AL + DA+++ AA++ V S+ N GT +LE R Sbjct: 378 DEPSVREALHD--ADAVLHMAAQTAVTTSLTSPVADFDVNARGTLNVLEALRA------- 428 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED----MPYNPS---------------SPYSATK 161 L ST++VYG L ++ P +PS +PY +K Sbjct: 429 -TGRPVPLLFASTNKVYGDLADLTVTDSNEACAPDDPSVRAHGVGEGRPLDFCTPYGCSK 487 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQ 218 +D VL + +YG+P + S YGP F + + + + ++ + ++G G+ Sbjct: 488 GVADQYVLDYAKSYGLPAAVLRMSCIYGPRQFGTEDQGWVAHFLIQALKKRPITVFGTGR 547 Query: 219 NVRDWLYVEDHVRALYLVLKK--GRIGERYNIGG--NNERKNIDIVFEIGFLLDALIPKS 274 VRD L V D VRA VL + G G +N+GG N + ++ EI + I + Sbjct: 548 QVRDVLDVADAVRAYRAVLGQIDGLRGRAFNLGGGPGNAVSLMQVLREIESITGRDIDVT 607 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 Y + R G + D+ +++ GW + GL W D Sbjct: 608 YQ--------DWRQGDQPWFVADTRALEAATGWRARIGWRDGLRGLADWLTDGE 653 >gi|91201875|emb|CAJ74935.1| strongly similar to UDP-glucuronate 5'-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 337 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 44/353 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 +++VTG AGFIG + + L+ V ID + Y L + +K++ + FSF + Sbjct: 3 KILVTGAAGFIGYYVSKKLLAS-GFNVTGIDNINDYYDTTLKHDRVKQLINNKQFSFHTL 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D++ + K+ + D ++N AA+ V S++ +I +NI+G +LE R Sbjct: 62 DIIDKDALLLIFKKEKFDGVINLAAQPGVRYSLINPHAYIDSNIVGFINILEGCR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + + + S+ VYG K FSE + P+S Y+ATK +++ + + Y Sbjct: 117 ----QNNVQHLVYASSSSVYGKNTKIPFSEHHNVDHPASLYAATKKANELMAHTYSGIYN 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ L +IEG + ++ G+ RD+ Y++D V + V Sbjct: 173 IPCTGLRFFTVYGPWGRPDMAYFLFTKAIIEGKPINIFNHGKMKRDFTYIDDIVEGVVKV 232 Query: 237 LKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + + GE YNIG N K ++++ + L + L K+ Sbjct: 233 MMRIPCKNPDWDGENPDPATSNAPYRVYNIGNN---KPVELLRFVAILEEYLGKKAVK-- 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + + +PG + ++ ++G+ P +E+GL K WY W++ Sbjct: 288 ---KMLPMQPGDVPVTYANVDELIKDVGFKPATPIETGLKKFTDWY---KWYF 334 >gi|284176196|ref|YP_003406473.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284017853|gb|ADB63800.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 325 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 139/321 (43%), Gaps = 30/321 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS L L +++VL N +S + + ++ DI D Sbjct: 11 VLVTGGGGFIGSHLVEALAPHNEVRVL--------DNFSSGDRRHLPDSVTVVEGDIGDP 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ A + D I + AA V RS+ TN+ + ++LE+ R Sbjct: 63 IALQRAARGV--DVIFHHAALVSVSRSVDAPRRSNETNLDASLLVLEQAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 ++ R + S+ VYG D+ SE P+SPY K + D + Y + + Sbjct: 111 QEDARVVVASSAAVYGHPDELPVSETASTEPTSPYGIQKLAVDQYARRYADLYDLETVAL 170 Query: 183 NCSNNYGP-YHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YGP P +I + + G + + GDG+ RD+++V D VRA Sbjct: 171 RYFNAYGPRQQGPYSGVISTFLEQARAGEPITIEGDGEQTRDFVHVSDIVRANLQAATTD 230 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE YNI G R +I+ + E I + I + RPG R D SK Sbjct: 231 AVGEAYNI-GTGSRTSIEELAET-------ITDATGSDSPIVHRDSRPGDIRHSGADISK 282 Query: 301 IKSEIGWFPQENMESGLNKTV 321 + +G+ P+ ++ESG+ V Sbjct: 283 ARRTLGFEPRVSLESGIQSLV 303 >gi|260436535|ref|ZP_05790505.1| UDP-glucuronate 5'-epimerase [Synechococcus sp. WH 8109] gi|260414409|gb|EEX07705.1| UDP-glucuronate 5'-epimerase [Synechococcus sp. WH 8109] Length = 340 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 46/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+AL L+ +V+ +D L L ++ I+ + + F Sbjct: 5 VLVTGAAGFIGAALSTRLLQRGD-RVVGLDSLNDYYDPSLKQARLRQIEAIASEDAWRFA 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ + D + + + +P+ +VN AA++ V S+ +I +N++G LLE Sbjct: 64 EMALEDGDALMALFAAEKPEVVVNLAAQAGVRYSLENPAAYIQSNLVGFGYLLE------ 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 C K+ + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 118 GCRHHGTKN---LVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V + Sbjct: 175 YGLPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGKMQRDFTYIDDIVEGV 233 Query: 234 YLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 K +NIG + + + + A++ +++ Sbjct: 234 LRCCDKPATANAAFDPLHPDPATAAAPHRVFNIGNSQPTELLRFI--------AVMEQAF 285 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F +PG A D++ ++ +G+ P ++E+G++ WY D Sbjct: 286 GREAIKDFQPMQPGDVVATAADTNALEHWVGFKPSTSIETGVDAFARWYRD 336 >gi|114330187|ref|YP_746409.1| NAD-dependent epimerase/dehydratase [Nitrosomonas eutropha C91] gi|114307201|gb|ABI58444.1| NAD-dependent epimerase/dehydratase [Nitrosomonas eutropha C91] Length = 343 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 32/327 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDI 59 ++++TG G +GS L Y++ + V+ + + NL L + I++ + S D+ Sbjct: 4 KILITGITGQVGSQLADYILENTPYDVIGLMRWQEPMDNLYHLTDRINRKDRISLFYADL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I ++E QP+ I + AA+S+ S E + TNIIGT LLE R Sbjct: 64 NDYSAIARMIREIQPEYISHLAAQSYPKTSFNIPIETLQTNIIGTANLLENIRQLKEVDG 123 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D S+ EVYG G+ SE+ ++ +SPYS +K +DYL +G Y I Sbjct: 124 YDPVVHI----CSSSEVYGRAKPGIALSEETQFHGASPYSISKIGTDYLGQFYGEAYRIR 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRA 232 ++ + GP F E + I +IE + V G+ + R + D VRA Sbjct: 180 TFVTRMGTHSGPRRSDVFFESTVAKQIA-LIEAEYQEPVIHVGNLSSTRTFQDARDAVRA 238 Query: 233 LYLVL---KKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED- 286 +L+L ++G+I GE +NI G F++ +++ L+ S IR I D Sbjct: 239 YFLLLEASEQGKIPCGEYFNIAGEE-------AFKLPEVIEILLGMSTRRD--IRVITDQ 289 Query: 287 ---RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KI+S I W P+ Sbjct: 290 ERFRPIDADYQMFDNTKIRSTINWKPE 316 >gi|124025108|ref|YP_001014224.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. NATL1A] gi|123960176|gb|ABM74959.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. NATL1A] Length = 348 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 39/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFS----F 54 ++VTG AGFIG+AL + L+N L +V+ ID L Y+ +L + L EI + + + F Sbjct: 10 ILVTGAAGFIGAALVKALLN-LDFKVIGIDNLNDYYSTSLKRSRLTEIEKVSTVNGEWFF 68 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ I D + ++ + + P V+ AA++ V SI +I +N++G +LE R Sbjct: 69 YEIPIEDNKVLQDIINRYNPQVFVHLAAQAGVRYSITNPAAYIQSNLVGFANVLEGCR-- 126 Query: 115 WSCLSQDKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWG 172 ++Q + S+ VYG F E+ N P S Y+ATK S++ + + Sbjct: 127 --------QNQIPHLIYASSSSVYGGNKNLPFYEEQAVNHPVSLYAATKKSNELMAHTYS 178 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDH 229 H Y +P YGP+ P+ + P+ R I E VF YG Q RD+ Y++D Sbjct: 179 HLYDLPTTGLRFFTVYGPWGRPD-MAPMIFARSILNNEPIQVFNYGKMQ--RDFTYIDDV 235 Query: 230 VRALY-LVLKKGRIGERYN--IGGNNERKNIDIVFEIG--------FLLDALIPKSYSHT 278 V + KK I + +N + + +F IG + ++ L+ K+ Sbjct: 236 VEGIIRCCFKKASIDDEFNPLVPNPSTSSAPYRIFNIGNSRPTQLTYFIE-LLEKNLGKK 294 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F +PG A + S + + P ++E+G+ WYLD Sbjct: 295 AIKNFQPMQPGDVVSTAARMDLLNSWVDYKPITSIENGIKLFSEWYLD 342 >gi|189426414|ref|YP_001953591.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] gi|189422673|gb|ACD97071.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] Length = 335 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 30/340 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGG GFIGS L LV L QV ++D L Y GNL +++ + + + D+ Sbjct: 8 RVLITGGLGFIGSNLAIRLVQ-LGAQVTLVDSLIPEYGGNLWNIEPVKEQVRVNI--SDV 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D ++ ++ D + N A + SH+D S+ + N +LE R Sbjct: 65 RDEHAMKYLIQG--QDFLFNLAGQTSHLD-SMQNPYPDLEINARAQLSILEACR------ 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ST ++YG+ E P P K + ++ L + + YGI Sbjct: 116 --HHNPAIKLVFASTRQMYGAPRYLPVDEKHPLAPVDVNGINKMAGEWYHLVYNNVYGIR 173 Query: 179 VLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +N YGP + + + I ++ G V ++GDG+ VRD+ YV+D V A+ Sbjct: 174 ASVLRLTNTYGPRMRVKDARQTFLGIWIRNILTGQPVLVFGDGRQVRDFNYVDDVVEAML 233 Query: 235 L-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L GE +N+G ++ D L+ A S++ L+ F DR D Sbjct: 234 LCAASDAANGEIFNLGADDPANLQDTA---QLLVQAAGQGSFA---LVPFPPDRKAIDIG 287 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY-LDNNWWW 331 Y D KIK+ +GW P ++ GL +T+ +Y D +W Sbjct: 288 DYYADYGKIKATLGWQPAVALQEGLQRTLAYYRTDGAHYW 327 >gi|187918310|ref|YP_001883873.1| UDP-glucuronate 4-epimerase [Borrelia hermsii DAH] gi|119861158|gb|AAX16953.1| UDP-glucuronate 4-epimerase [Borrelia hermsii DAH] Length = 352 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 54/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--------------SLK 44 MR+ +TG AGFIG + + L ++ +VL +D + Y NL K Sbjct: 1 MRVFLTGIAGFIGFHVAKRLADNGH-EVLGVDVINDYYEPNLKYERLKALGFDRENICGK 59 Query: 45 EISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +I QSN + SF+ +DI ++E + S ++ + + AA++ + SI D +I+ NI Sbjct: 60 KILQSNKYDNLSFICLDILNKEQVLSLFSRYKFTHVCHLAAQAGIRDSIENPDSYISVNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G F +L+ R+ S + F+ ST VYG +K ED + +P + Y+A+ Sbjct: 120 VGFFNVLDACRIHKSHIEH-------FVYASTSAVYGINEKMPSDEDSITDHPLNLYAAS 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ ++ IP YGPY P+ + L + + + + ++ +G Sbjct: 173 KKSNEVIAHAYSSSFNIPTTGLRFFTVYGPYGRPDMALYLFADGITKQTPINVFNNGNMA 232 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ YV+D V +Y VLKK +R YNIG + K ++ + E Sbjct: 233 RDFTYVDDVVDGVYSVLKKPAESDRNFNTQNPNSSSSLAPYKIYNIGTGHAIKLMEFIDE 292 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + L K++ + +E SK+K++ + +++ G+ K Sbjct: 293 LETNLGNKACKNFLPMQKADVVES--------CCSISKLKNDFAYEALTSIKEGIKKFAH 344 Query: 323 WY 324 WY Sbjct: 345 WY 346 >gi|295398886|ref|ZP_06808868.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] gi|294978352|gb|EFG53948.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] Length = 328 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 146/329 (44%), Gaps = 48/329 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + QV+V+D NL + + F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVHRLIEKGE-QVIVVD------NLQTGHREAVHPEAIFYQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++ + DA+++FAA S V S+ ++ N+ GT +LLE +++ Sbjct: 55 AFLRDVFRKHEIDAVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLE-------VMNESS 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 Q F ST VYG + E P P++ Y TK + + ++ YGI + Sbjct: 108 VKQIVFS--STAAVYGEPKQIPIVETDPTMPTNTYGETKLAVEKMMKWVEQAYGIRYISL 165 Query: 183 NCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G Y H PE LIPL + + + + ++G DG +RD+++V Sbjct: 166 RYFNVAGAYGTLIGEDHDPETHLIPLILKVPLGQRDEIHIFGDDYDTHDGTCIRDYIHVL 225 Query: 228 DHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIP---KSYSHTELI 281 D V A L ++K R G YN+G N GF + +I K H Sbjct: 226 DLVDAHILAVEKLRSGAESNVYNLGNGN-----------GFTVKEVIEAARKVTGHPIPA 274 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + RPG + + K K E+GW P+ Sbjct: 275 RVMARRPGDPAKLVASAEKAKRELGWEPK 303 >gi|172058630|ref|YP_001815090.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sibiricum 255-15] gi|171991151|gb|ACB62073.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sibiricum 255-15] Length = 342 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 43/348 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQ--SNLFSFL 55 ++++TG GFIG L L++ + I+V+ +D Y NL N ++I + F F Sbjct: 5 KILITGALGFIGFHLSNKLLS-MGIEVIGLDNENNYYDVNLKKNRFEKIKSDYKDSFYFY 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI DRE + + ++ + ++N AA++ V SI ++ +N+ G +LE Sbjct: 64 KIDITDREKLNTLFEKHNIEIVINLAAQAGVRYSIENPYAYLDSNLTGFLNILE------ 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 +C + K L S+ VYG FS + + P S Y+ATK S++ + + H Sbjct: 118 ACRNYPVK---HLLYASSSSVYGGNKVAPFSTNHNVDHPVSLYAATKKSNELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YGP+ P+ ++EG+ + ++ G+ RD+ Y++D V + Sbjct: 175 YDIPTTGLRFFTVYGPWGRPDMAYFSFTKDIVEGNPIKVFNHGKMERDFTYIDDIVEGIV 234 Query: 235 LVL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 ++ K +G YNIG N + + + +L+ I K + Sbjct: 235 KLIPRAPQKNPDWDESKDELGASFAPYRVYNIGNNQPVQLMKFI----NVLEEKIGKEAN 290 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +++E +PG R D S+++ +I + P ++E GL K V WY Sbjct: 291 K----KYMEMQPGDVLRTYADVSELERDIDFKPSTSIEEGLGKFVDWY 334 >gi|315170788|gb|EFU14805.1| NAD-binding domain 4 [Enterococcus faecalis TX1342] Length = 319 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLSNFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQARQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|15807195|ref|NP_295924.1| UDP-glucose 4-epimerase [Deinococcus radiodurans R1] gi|6460005|gb|AAF11751.1|AE002053_6 UDP-glucose 4-epimerase [Deinococcus radiodurans R1] Length = 394 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/335 (28%), Positives = 154/335 (45%), Gaps = 54/335 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+V GGAG+IGS R L +V V D NL+S + ++ D+ Sbjct: 1 MKLLVVGGAGYIGSHTVRQL-RAAGHEVAVFD------NLSSGHAEALPGEVELIRGDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D IR+AL+ +PDAI++FAA V S+ + N++GT LL+ + + Sbjct: 54 DAASIRAALEAQKPDAIIHFAALIEVGESMRAPGRYYRNNVVGTLNLLQ-------SIVE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 +K F ST VYG+ D ED P S Y TK S+ ++ A+ +G+P Sbjct: 107 TRKVPLVF--SSTAAVYGTTDAVPIPEDAAMQPESVYGETKRMSEQMIHAFHVAHGLPYT 164 Query: 179 ------VLLSNCSNNYGPYHFPEK--LIPLA-ITRMIEGSHVFLYG------DGQNVRDW 223 V + + G H P K LI LA +T + + + ++G DG +RD+ Sbjct: 165 VLRYFNVCGAAPGGDIGEAH-PNKTHLIELACLTALGQREKMMIFGDDYPTPDGTCIRDY 223 Query: 224 LYVEDHVRALYLVLKKGRIGE----RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 ++V+D A L ++ G+ YN+G G + R+ +D V DA++ Sbjct: 224 VHVQDLADAHVLAVEALHAGKTDAATYNVGLGHGFSVREVLDAV-------DAVV----- 271 Query: 277 HTELIR-FIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 T L R R G R D+S+I ++G+ P+ Sbjct: 272 GTPLQRELAPRRAGDPPRLVADASRIVDQLGFAPK 306 >gi|330810642|ref|YP_004355104.1| UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378750|gb|AEA70100.1| UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/370 (23%), Positives = 161/370 (43%), Gaps = 60/370 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAGNLNSLKEISQ 48 M ++VTG AGFIG+ + L+ ND L D++T+ + Q Sbjct: 1 MNILVTGAAGFIGAHVVLRLLRDGHRVCGLDNFNDYYDPQLKHDRVTWVND--------Q 52 Query: 49 SNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL 108 + F ++D+ D I + +PD +++ AA++ V S+ ++ +NI G +L Sbjct: 53 AGEFPLARIDLVDAPAIDELFQTRRPDVVIHLAAQAGVRYSLENPQAYVDSNITGFLNIL 112 Query: 109 EETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYL 167 E R + + S+ VYG+ + +S +D +P S Y+A+K +++ + Sbjct: 113 ENCRRYPVK---------HLIYASSSSVYGANPRTPYSVQDNVDHPLSLYAASKKANELM 163 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYV 226 ++ H +GIP YGP+ P+ + P+ R I V L+ G++ RD+ Y+ Sbjct: 164 AHSYSHLFGIPCTGLRFFTVYGPWGRPD-MSPIQFARAIVEDRVLQLFNHGEHQRDFTYI 222 Query: 227 EDHVRALYLVLKKG-----------------RIGER-YNIGGNNERKNIDIVFEIGFLLD 268 +D V ++ ++ + R R YNIGG + V Sbjct: 223 DDIVESIARLIDRAPQVTPLLDHEQPDPATSRAPWRIYNIGGQHPVALRSYV-------- 274 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 AL+ K T I + + G D+S + G+ P+ ++ GL + + W+LD Sbjct: 275 ALLEKHLGQTARIELLPLQAGDVLNTCADASDLARATGFKPRIELDEGLGRFIQWFLD-- 332 Query: 329 WWWRPLYKEL 338 ++ RP + L Sbjct: 333 YYARPAHAPL 342 >gi|153939585|ref|YP_001391998.1| polysaccharide biosynthesis protein [Clostridium botulinum F str. Langeland] gi|152935481|gb|ABS40979.1| polysaccharide biosynthesis protein [Clostridium botulinum F str. Langeland] gi|295320013|gb|ADG00391.1| polysaccharide biosynthesis protein [Clostridium botulinum F str. 230613] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 157/330 (47%), Gaps = 21/330 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV +L +V + + N +++ + + N+ + + D Sbjct: 7 KVLVTGSEGFIGSHLTERLV-ELGAEVTALVQYNSFNNWGWIDTFSKEVKDNI-NIVTGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + + ++ +K D + + AA + S L ++ TNI GT +LE R + Sbjct: 65 IREYDGMKRIIK--GQDVVFHLAALIAIPYSYLSPMAYVKTNIEGTTNVLEACREY---- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + ST E YG+ E P + SPYSA+K +D + ++ ++ +P Sbjct: 119 -----EVEKIVHTSTSETYGTALYVPIDEKHPMHGQSPYSASKIGADKIAESFYRSFNLP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ N YGP +IP I++++ G RD+ YV+D V A V++ Sbjct: 174 VVTIRPFNTYGPRQSARAVIPTIISQILAEKTEIKLGGLSPTRDFNYVKDTVEAFIKVVE 233 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + IG+ N G N E D V +I ++ + K E IR ++ +R +A D Sbjct: 234 SNKTIGQVINAGSNYEISIGDTVRKIINIIGKDV-KILCDEERIR--PEKSEVNRLWA-D 289 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + KIK W P+ +++ GL +T+ W +N Sbjct: 290 NRKIKELTSWNPRYSLDDGLKETIEWIRNN 319 >gi|163849697|ref|YP_001637740.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661302|gb|ABY28669.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 346 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 41/334 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D L G ++L +S+ F F++ DI + Sbjct: 8 VLVAGGAGFIGSHLVDALLAR-GARVIALDSL-LTGRRDNLAHLSREPRFEFVEADITE- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L F+ + N A + + T+++GT LLE R Sbjct: 65 --PLPRLPRFE--RVFNLACAASPPHYQADPIHTMLTSVVGTLRLLERAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHTY 175 D RFLQ ST EVYG D + + Y NP+ P Y K +++ L + Sbjct: 111 NDGARFLQASTSEVYG--DPLVHPQPEAYWGNVNPTGPRACYDEGKRAAETLAFDFERGQ 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ I + + + V +YGDG+ R + YV D V L Sbjct: 169 GLEVRVARIFNTYGPRMRADDGRVVSNVICQALADAPVTVYGDGEQTRSFCYVTDLVEGL 228 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L+ + G N+G E ++V + + + + + ++R D P Sbjct: 229 MRLMACEAAPGGPVNLGNPREMTVAELVSLVSEM-------TGTRSPVVRRPLPVDDP-- 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ ++ +GW P+ +E GL T+ W+ Sbjct: 280 -QRRRPDIARAQALLGWSPKVALEQGLEATIAWF 312 >gi|197121531|ref|YP_002133482.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|196171380|gb|ACG72353.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] Length = 352 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 46/349 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVD 58 R++V GGAGFIG+ L L++ +V ++D L G NL L+ + + + D Sbjct: 5 RVLVVGGAGFIGANLAHRLLSS-GTRVRLLDSLARPGVERNLAWLRA-THGDRLEVITGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + A++ A+ + AA+ V S++ + N GT +LE R Sbjct: 63 VRDPGAVARAVE--GASAVFHLAAQVAVTTSLVDPVQDFEVNARGTLNVLEAVR------ 114 Query: 119 SQDKKDQFRF-LQISTDEVYGSLDKGLFSED----MPYNPS--------------SPYSA 159 ++D F L ST++VYG+L+ L + P +P SPY Sbjct: 115 ---RQDPPPFVLFTSTNKVYGALEDVLLEDAGRRYAPVDPGLHRGISEARNLAFHSPYGC 171 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGD 216 +K +++ VL W TYG+P + S YGP+ F + + + + + + LYGD Sbjct: 172 SKGAAEQYVLDWARTYGVPATVFRMSCIYGPHQFGTEDQGWVAHFLIQAMARRPITLYGD 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+VED + A ++ R G +N+GG + + ++ + + + Sbjct: 232 GKQVRDILFVEDLLDAFLAARERPREVAGRAFNLGGGPD-NTVSLIELLELVEALEGVRP 290 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 E R + R Y D S + GW P+ ++ G+ + W Sbjct: 291 RVTLEPWRLAD-----QRWYVSDPSAFAALAGWAPRTGVQEGVGRLHAW 334 >gi|30250207|ref|NP_842277.1| NAD-dependent epimerase/dehydratase family protein [Nitrosomonas europaea ATCC 19718] gi|30181002|emb|CAD86189.1| NAD dependent epimerase/dehydratase family [Nitrosomonas europaea ATCC 19718] Length = 335 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIGS L L+ + V+ ID Y L + L + ++ L+ Sbjct: 1 MKVLITGSAGFIGSTLALRLL-ERGDTVIGIDNHNDYYDPKLKEDRLARFADHPDYTHLR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I++ + ++P +VN AA++ V SI +I +NI+G +LE R Sbjct: 60 LDLADREGIKTCFETYKPQRVVNLAAQAGVRYSIENPLAYIDSNIVGFAHILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 D + S+ VYG+ FS + P S Y+A+K S++ + + H Y Sbjct: 116 -----HNDVEHLVYASSSSVYGANTMMPFSVHHNIDHPLSLYAASKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + ++ G++ RD+ YV+D V + Sbjct: 171 NLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEKIPVFNYGKHRRDFTYVDDIVEGVIR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL + YNIG N+ + +D + A + K+ Sbjct: 231 VLDQPARSNPAWSGANPDAGTSLAPWRVYNIGNNSPVELMDYI--------AALEKALGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S + + + P +E G+ V WY Sbjct: 283 KAEMEMLPLQPGDVPDTYADVSDLVEQFDYKPATPVEQGIANFVTWY 329 >gi|146277376|ref|YP_001167535.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] gi|145555617|gb|ABP70230.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] Length = 345 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 37/328 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+++ V+ +D L G + ++ + F F++ DI DR Sbjct: 26 VLVAGGAGFVGSHLCETLISEGH-SVVCLDNL-QTGRIQNISALQAHPQFRFIEQDILDR 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L D I N A + + + I TF E L + L K Sbjct: 84 LNWQGPL-----DEIYNLACPA--------SPPLYQRDPIHTFRTCTEGVL--NLLGLAK 128 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 R LQ ST EVYG + L E P + Y K +++ L +G G+ Sbjct: 129 ATGARILQASTSEVYGDPEITLQHEGYRGCVNTVGPRACYDEGKRAAETLFWEFGTHMGV 188 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP PE +++ I + + G+ + +YGDG R + YV+D V L Sbjct: 189 EVRIARIFNTYGPRMSPEDGRVVSNFIVQALTGADITIYGDGMQTRSFCYVDDLVAGLK- 247 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDRR 293 L + N+G E F + L D ++ ++ S + L++ D P R+ Sbjct: 248 ALMASETSDPVNLGNPGE-------FTMRELADMVLRQTDSRSRLVQCPLPVDDP---RQ 297 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D S+ + +GW P +E G+ +T+ Sbjct: 298 RRPDISRAAARLGWAPTVALEEGIARTI 325 >gi|331269185|ref|YP_004395677.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] gi|329125735|gb|AEB75680.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] Length = 331 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 16/333 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GFIGS L LV +L V + + N + + N+ ++V D Sbjct: 7 KVLVTGAEGFIGSHLTERLV-ELGADVTALVQYNSFNNWGWIDTFDK-NIKDSIKVITGD 64 Query: 62 -RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE + I++ AA + S L ++ TN+ GT +LE R Sbjct: 65 VREYDNVKRMVSGQEVIMHLAALIAIPYSYLSPMAYVRTNVEGTTNILEACR-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++K+ + + ST E YG+ E P SPYSA+K +D + ++ ++ +P+ Sbjct: 117 EEKNIQKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIGADKMAESFYKSFNLPIA 176 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 177 TIRPFNTYGPRQSARAVIPTIISQILAGKREIKLGSLTPTRDFNYVKDTAEAFVKIAESD 236 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 + IGE N G N E D V +I L+ + K E IR ++ +R +A D++ Sbjct: 237 KTIGEVINAGSNYEISIGDTVKKIIELIGHDV-KVLCDEERIR--PEKSEVNRLWA-DNT 292 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 KIK+ W P+ +++ GL +T+ W +N +++ Sbjct: 293 KIKNLTEWTPKYSIDEGLAETIEWIKNNMQYFK 325 >gi|289522135|ref|ZP_06438989.1| UDP-glucose 4-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503971|gb|EFD25135.1| UDP-glucose 4-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 330 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 96/339 (28%), Positives = 151/339 (44%), Gaps = 47/339 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + + + +V+VID L+ G L +L + F ++DICD Sbjct: 16 VLVTGGAGFIGSHIVDAFIEEGH-RVIVIDNLS-QGKLENLNSKA-----GFYKLDICDS 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E PD + + AA+ V +S+ NI G +L SC + Sbjct: 69 R-VSEVFDEVHPDYVCHHAAQIDVRKSVANPMYDAEVNIKGLLNIL-------SCAIRTG 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 F S VYG SE P P SPY +K SS+Y + + +G+P + Sbjct: 121 VKGVIFAS-SGGVVYGEPTLLPVSETHPKGPLSPYGVSKLSSEYYLYYYNKVFGLPYIAL 179 Query: 183 NCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 +N YGP P ++ + +M++ +YGDG VRD++YV D A L L+ Sbjct: 180 RYANVYGPRQDPMGEAGVVAIFSNKMLKEEVPTIYGDGTQVRDYVYVGDVAMANILSLQ- 238 Query: 240 GRIGER----------YNIG---GNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIE 285 R+ E YNIG G + + DI+ + IGF ++ R Sbjct: 239 -RLKETRAPSSIDDHAYNIGTSIGTSVNELYDILSDIIGF------------QKMARHDA 285 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R G + + K K E+G+ P ++ GL +T+ ++ Sbjct: 286 PRKGELYKTYLSIDKAKEELGFVPSVSLRDGLKRTLAYF 324 >gi|262195081|ref|YP_003266290.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262078428|gb|ACY14397.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 331 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 26/331 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGS L+ +V+V+D L+ G +L + + F ++ DI D Sbjct: 11 VAVTGGAGFIGSHTVDRLLA-AGCRVVVLDNLS-TGKRENLAQHAGEPRFHLVETDIADG 68 Query: 63 --ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + E P I++ AA++ V RS+ I N GT +LE R Sbjct: 69 LFAPLAALTDEHGPVQRIIHLAAQTSVVRSVEQPLHDIRINYAGTAQVLEYAR------- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + S+ VYG ++ E +P P SPY A K S+ L+ + +G+ Sbjct: 122 --HRGVAKVVLASSAAVYGDTEELPVRETLPTRPLSPYGANKLGSEQLLYYYSAVHGVGT 179 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YGP P+ +I + R + G + ++GDG+ RD++YV D RA+ Sbjct: 180 TALRFFNVYGPRQDPKSPYSGVISIFADRAMAGKPLTIFGDGEQTRDFVYVGDVSRAVAQ 239 Query: 236 VLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDR 292 G G+R NIG +E V E+ + +L ++ E+ I + RPG Sbjct: 240 AC-LGDEGDRAIINIGTGSE----TTVNELARTIVSLCGEAAGAPEVAISHSDARPGEIA 294 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R +++ +G + + +GL +T+ W Sbjct: 295 RSVAAVERMRDILGLRAETELAAGLRETLAW 325 >gi|300786160|ref|YP_003766451.1| dTDP-glucose 4,6-dehydratase [Amycolatopsis mediterranei U32] gi|299795674|gb|ADJ46049.1| dTDP-glucose 4,6-dehydratase [Amycolatopsis mediterranei U32] Length = 316 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 141/330 (42%), Gaps = 33/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+G+ LC L+ + I+V+ +D L + + +SL + + F F++ D+ Sbjct: 7 RAVVTGGAGFVGAHLCELLLEE-DIEVIAVDNLATS-SADSLDHLRRYAGFRFVRHDVT- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D + + A+ + + E + GT LE R Sbjct: 64 ----QPMPPSCEADVVFHLASAASPRDYLALPLETLRAGSHGTENALELAR--------- 110 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF+ ST EVYG +G + P P S Y K ++ L A+ +G Sbjct: 111 -RARARFVLASTSEVYGDPLEHPQQEGYWGNVNPIGPRSVYDEAKRYAEALTSAYRREFG 169 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + ++ N YGP ++IP + + ++ + + G G+ R YVED R L Sbjct: 170 VDTAIARIFNTYGPGMRAHDGRMIPAFLDQALKNEPITVTGTGEQTRSICYVEDTARGLL 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + + G NIG E + I L + P Y I + D P +R Sbjct: 230 ALARADHPGP-VNIGNPEELTVRQVAERIKHLTGSRSPIEY-----IDAVVDDP---QRR 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + +GW P+ + E GL +T W+ Sbjct: 281 CPDISLARDVLGWEPKVDSEDGLRRTAAWF 310 >gi|229082476|ref|ZP_04214939.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-2] gi|228700908|gb|EEL53431.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-2] Length = 330 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAIMEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEQPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSKKAKEKLGWDPK 306 >gi|149174385|ref|ZP_01853012.1| UDP-glucose 4-epimerase, putative [Planctomyces maris DSM 8797] gi|148846930|gb|EDL61266.1| UDP-glucose 4-epimerase, putative [Planctomyces maris DSM 8797] Length = 333 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 38/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVI----DKLTYAGNLNSLKEISQSNLFSFLQ 56 +++VTG GFIGS L LV + +++ LV +++ + +L++ E+ QS +Q Sbjct: 9 QVLVTGADGFIGSHLVEQLVASGARVRALVYYNSWNQIGWLSDLSN--EVLQS--IEIIQ 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D E ++ A+ + + ++ + S + A ++ TNI G +L+ + Sbjct: 65 GDIRDTERVKGAVTGC--GYVFHLSSLIAIPYSYVAARSYVDTNITGALNVLQ------A 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C S D R + +ST EVYGS + ED P SPYSA+K +D + ++ ++ Sbjct: 117 CRSSDSLT--RLVHVSTSEVYGSAQRVPIDEDHPLVGQSPYSASKIGADKMAESYYLSFE 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-L 235 +PV+ + N YGP +IP ++++ G G RD+ + D + L Sbjct: 175 LPVVTARPFNTYGPRQTARAVIPTIASQLLSGCSELKLGALTPTRDFNFATDTAAGMIAL 234 Query: 236 VLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L K GE NIG E + I+ E+ +P I EDR ++ Sbjct: 235 ALCKQAEGEVVNIGSGREWSIEETAKILMEV---TGCEVP--------ILCDEDRIRPEK 283 Query: 293 ----RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D++KI+ W Q + ++GL T W Sbjct: 284 SEVNRLLADNTKIQKLTDWKSQVSFQAGLGATADW 318 >gi|27380532|ref|NP_772061.1| dehydratase-like protein [Bradyrhizobium japonicum USDA 110] gi|27353696|dbj|BAC50686.1| dehydratase-like protein [Bradyrhizobium japonicum USDA 110] Length = 342 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 34/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGGAGFIGS L L++D +V+ +D G +L + S+ ++ D+ Sbjct: 1 MKCIVTGGAGFIGSHLVDRLLDDGH-EVIALDNFVI-GRSENLSSRADSSRLKIVRADVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE I D + + AA + + SI + N+ GT +LE R Sbjct: 59 DRESISPYFSGI--DWVFHLAALADIVPSIESPIPYHRANVDGTVNVLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RF+ ++ YG D E P PY+ TK + V+ W Y +P + Sbjct: 109 -EAGVSRFVYAASSSCYGIPDIYPTPESAEIRPMYPYALTKNLGEQCVMHWCQVYKLPAV 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP H + + + + + G + GDG+ RD+ +V D A Sbjct: 168 ALRLFNVFGPRHRTTGTYGAVFGVFMAQKLAGKPFTVVGDGEQTRDFTFVSDVADAFVTA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + E +N+G +N + + L++ L+ H I RPG Sbjct: 228 ARSDVSHEIFNVGSDN-------TYSVNRLVE-LLGGDKVH------IPKRPGEPDCTYA 273 Query: 297 DSSKIKSEIGWFPQENMESGLN---KTVCWYLDNNWW 330 D +KIK + W P+ E G+ K++ Y D W Sbjct: 274 DITKIKRVLKWTPKVKFEDGVATMLKSMDQYKDAPLW 310 >gi|268325713|emb|CBH39301.1| putative Vi polysaccharide biosynthesis protein vipB/tviC [uncultured archaeon] Length = 312 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 143/333 (42%), Gaps = 41/333 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ I+TGGAGFIGS L L D +V+++D L+ GN +++ + ++ + Sbjct: 2 MKAIITGGAGFIGSNLAEVLSRDN--EVIIVDDLS-TGNEANIRGLE----IELVKGSVT 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +R K D + + AA V RSI N+ GT +L R C + Sbjct: 55 DLDLLRKIFK--GADYVFHQAAIPSVPRSIKDPVSTNEANVTGTLNVLIAAR---DCSVK 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ YG + EDM NP SPY+ TK +Y + Y + + Sbjct: 110 ------KVIFASSSSAYGDTPELPKREDMNPNPLSPYAVTKLIGEYYCNVFDEVYDLKTV 163 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P +IP I R+ EG +YGDG RD+ V+D V A L Sbjct: 164 ALRYFNVYGPKQDPHSDYAAVIPKFIKRIQEGKPPIIYGDGTQTRDFTSVDDVVSANILA 223 Query: 237 LKKGRIGERYNIGGN-----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + G YN+ NE N+ I+ +G LD + K R G Sbjct: 224 AESDAKG-VYNVATGKRITINELANV-IMAIMGRDLDPIHEKQ------------REGDV 269 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K K + G+ P + +E L +TV W+ Sbjct: 270 LHSLGDITKAKKDFGYAPGDKLEENLKETVKWF 302 >gi|183597200|ref|ZP_02958693.1| hypothetical protein PROSTU_00443 [Providencia stuartii ATCC 25827] gi|188023514|gb|EDU61554.1| hypothetical protein PROSTU_00443 [Providencia stuartii ATCC 25827] Length = 333 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG LC+ L+ D +V+ ID + Y L L + Q F F+ Sbjct: 1 MKYLVTGSAGFIGFRLCQRLL-DSGHEVVGIDNMNAYYDQGLKQSRLHILEQYPHFRFIP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DRE + + D +++ AA++ V S+ + +N+ G +LE Sbjct: 60 LDITDREKVVVLCTQEDFDRVIHLAAQAGVRYSLQNPFAYADSNLSGHLAILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG ++ FS DMP + P S Y+ATK +++ + ++ H Y Sbjct: 114 CRQANVK---HLVYASSSSVYGMSEQTPFSTDMPTDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 +P YGP+ P+ + ++ G + +Y +G RD+ +++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEPIDVYNNGNLSRDFTFIDDIVEGVIR 230 Query: 235 --------------LVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 L + R R YNIG K D + + KS Sbjct: 231 ISDIIPQADPENGSLSPAQSRAPYRLYNIGNGQPVKLTDFI--------TALEKSLGKKA 282 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ + G D+ + G+ PQ ++E G+ V WY Sbjct: 283 IKNFLPMQAGDVYTTWADTEDLFKVTGYRPQVSIEQGVQAFVDWY 327 >gi|114798701|ref|YP_761327.1| UDP-glucuronate 5'-epimerase [Hyphomonas neptunium ATCC 15444] gi|114738875|gb|ABI77000.1| UDP-glucuronate 5'-epimerase [Hyphomonas neptunium ATCC 15444] Length = 334 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 163/349 (46%), Gaps = 32/349 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIGS + L+ + V +D T + LKE + L F Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGH-SVTGVDCFTPYYD-PQLKEDRAARLTAFDDFRLE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ I D E + + + P+ +++FAA++ V S+ +FI NI+G+F +++ +R Sbjct: 59 RIRIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSPYSATKASSDYLVLAWGH 173 + + ST YG+ K F E PY P + Y+ATK +S+ + + H Sbjct: 116 ------RHGTQHLVMASTSSAYGANQKFPFEERDSAPY-PLTIYAATKLASELIAHSHAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+P + + YGP+ P+ L ++ +G + ++ G +RD+ Y++D V A+ Sbjct: 169 LYGVPTTVLRFFSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAI 228 Query: 234 YLVLKKGRIGERYNIGGNNERK-------NIDIVFEIGFLLDAL--IPKSYSHTELIRFI 284 ++ + + I G++ NI + L+D + I + I Sbjct: 229 RRLMDTPPVVGNHIIRGDSLSPVAPYRLVNIGNASPVR-LMDYIEAIEGAIGRKAEKNMI 287 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + +PG ++ D + + G+ P + +G+ + V WY D +++P Sbjct: 288 DMQPGDVKQTFADVRLLDALTGYTPDTDYRTGIARFVDWYRD---YFKP 333 >gi|317124397|ref|YP_004098509.1| NAD-dependent epimerase/dehydratase [Intrasporangium calvum DSM 43043] gi|315588485|gb|ADU47782.1| NAD-dependent epimerase/dehydratase [Intrasporangium calvum DSM 43043] Length = 351 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 150/346 (43%), Gaps = 59/346 (17%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFS-------- 53 ++VTG GFIGS LV D +++ + Y N SL + QS +F+ Sbjct: 25 VLVTGSDGFIGSHTVERLVADGARVKAFCL----YNSN-GSLGWLDQSEVFAQALRDGQA 79 Query: 54 -FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + DI D E + ++++ D +++ AA + S + ++ TN+IGT +LE R Sbjct: 80 EVVLGDIRDPEHVAASIEGV--DVVLHLAALIAIPFSYVAPRSYVETNVIGTLNVLEAVR 137 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + R + ST EVYG+ ++ +E P SPYSATK S+D L ++ Sbjct: 138 ---------RHGTPRLVNTSTSEVYGTPEEVPITEHHPLRGQSPYSATKISADKLCESYA 188 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH--- 229 ++ PV+ N +GP +IP +++++ G+ GD RD+ YV D Sbjct: 189 LSFETPVVTLRPFNTFGPRQSARAVIPTVLSQLLAGADQVRLGDLTPKRDFTYVTDTADG 248 Query: 230 -VRA--------LYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VRA + L GR IGE + +IV E +A I S Sbjct: 249 FVRAALCDVAPGTTIQLGTGRTVSIGEVVELCRTVTGSTAEIVTE-----EARIRPEGSE 303 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +++ D ++ +GW P ++E GL +T W Sbjct: 304 VQILLS-------------DPTRAHEVLGWAPTVSLEEGLARTAEW 336 >gi|138895729|ref|YP_001126182.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] gi|134267242|gb|ABO67437.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] Length = 328 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 151/331 (45%), Gaps = 54/331 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS L+ + +V+V+D L G+ ++ ++ F Q DI DR Sbjct: 2 ILICGGAGYIGSHAVYRLLEKGE-EVIVVDNLQ-TGHREAVHPDAR-----FCQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R+ +++ +A+++FAA S V S+ ++ N+ GT +LLE + Sbjct: 55 DFLRTVFQQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMK---------- 104 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 105 --EFDVRQIVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRS 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + +F++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTTIGEDHNPETHLIPLILKVPLGQREEIFIFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A L L K R G + YN+G N GF + +I + H Sbjct: 223 HVLDLVDAHVLALNKLRNGADSDVYNLGNGN-----------GFSVKEVIEAARQVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R + RPG + S K K E+GW P Sbjct: 272 IPARVMARRPGDPAKLVASSDKAKRELGWEP 302 >gi|196248608|ref|ZP_03147308.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] gi|196211484|gb|EDY06243.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] Length = 328 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 151/331 (45%), Gaps = 54/331 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS L+ + +V+V+D L G+ ++ ++ F Q DI DR Sbjct: 2 ILICGGAGYIGSHAVYRLLEKGE-EVIVVDNLQ-TGHREAVHPDAR-----FCQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R+ +++ +A+++FAA S V S+ ++ N+ GT +LLE + Sbjct: 55 DFLRTVFQQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMK---------- 104 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 105 --EFDVRQIVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRS 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + +F++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTTIGEDHNPETHLIPLILKVPLGQREEIFIFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A L L K R G + YN+G N GF + +I + H Sbjct: 223 HVLDLVDAHVLALNKLRNGADSDVYNLGNGN-----------GFSVKEVIEAARQVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R + RPG + S K K E+GW P Sbjct: 272 IPARVMARRPGDPAKLVASSDKAKRELGWEP 302 >gi|315149383|gb|EFT93399.1| NAD-binding domain 4 [Enterococcus faecalis TX0012] Length = 319 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ + + R I+ S ++GDGQ RD++Y++D + A Sbjct: 170 VRFFNVYGPNQNPASPYSGVLSILMDRYIQLEQGQASQFPIFGDGQQTRDFIYIDDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P ++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIREGLQK 308 >gi|254430817|ref|ZP_05044520.1| WbnF [Cyanobium sp. PCC 7001] gi|197625270|gb|EDY37829.1| WbnF [Cyanobium sp. PCC 7001] Length = 340 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 30/344 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+A+C L+ + +VL D L L L ++ + F+ Sbjct: 1 MLVTGAAGFIGAAVCERLLARGE-RVLGFDNLNAYYDPALKRARLARLATLAAPQQWGFV 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D I + + +P+ +V+ AA++ V SI ++++N++G +LE R Sbjct: 60 PQALEDAAAIEALFQAERPNRVVHLAAQAGVRHSIENPAAYLSSNLLGFGHVLEACR--- 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG FSE N P S Y+ATK +++ + ++ H Sbjct: 117 ------HHGVEHLVYASSSSVYGGNTNLPFSEAQAVNHPVSLYAATKKANELMAHSYSHL 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V + Sbjct: 171 YGLPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIQVFNHGRMRRDFTYIDDVVEGV 229 Query: 234 YLVLKKGRIGERYNIGGNNERKN---IDIVFEIG-------FLLDALIPKSYSHTELIRF 283 L K + + + VF IG AL+ ++ + Sbjct: 230 IRCLDKPATPDPGFEAMHPDPATSWAPHRVFNIGNSQPVELLCFIALLEQALGRPAIKVL 289 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +PG A D+S +++ +G+ P +E G+ + WYL + Sbjct: 290 LPMQPGDVEATAADTSLLEAWVGFRPFTPLEQGVERFAHWYLSD 333 >gi|258654323|ref|YP_003203479.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM 44233] gi|258557548|gb|ACV80490.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM 44233] Length = 334 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--EISQSNLFSFLQVD 58 M +VTG AGFIGS L L+ D + +VL +D + G + +L+ + + + +++D Sbjct: 1 MTALVTGAAGFIGSTLVDRLLADGQ-RVLAVDDFSR-GRMENLRFAQAAGGERLATIRLD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT---TNIIGTFILLEETRLWW 115 I D + + +P+ + + AA+ V S+ D+ +T N++GT Sbjct: 59 IGDPR-LAEVMAAARPEVVYHLAAQVDVRCSV---DDPVTDARINVLGTIA-------VA 107 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F S +YG D+ E P SPY+ K + + + A+ + Sbjct: 108 DAARAAGVRKIVFTS-SGGSIYGVPDRLPVDEGAALQPRSPYAVAKVAGELYLNAYSGLH 166 Query: 176 GIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ +N YGP P ++ + ++ G L+GDG N RD+++VED A Sbjct: 167 GVQCTHLALANVYGPRQDPSGEAGVVAIFTHALLTGRPTRLFGDGSNTRDYVFVEDVAAA 226 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L G R+NIG + + ++ + L A P +H RPG Sbjct: 227 LQAAAAPGWDRVRFNIGTGRQTSDRELHSVLAGLAGA--PDEPTHAPA------RPGDLH 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTV 321 A+DS++ ++GW P+ + GL +TV Sbjct: 279 HSAVDSTRAHRDLGWTPEHTLAQGLRRTV 307 >gi|46200716|ref|ZP_00207811.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 334 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 139/333 (41%), Gaps = 35/333 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L+ + +V VID + G +L + + S +DI DR+ Sbjct: 7 LITGGAGFIGSHLVDRLLAEGH-RVTVIDNCS-TGRPQNLDHVKGHPMLSAHWLDINDRD 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I + D + + AA + + SI A ++ N+ GTF +LE R Sbjct: 65 AIGPLFQGV--DRVFHLAALADIVPSIQNATDYHHANVDGTFAVLEAAR---------HA 113 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 RF+ ++ YG D E P PY+ TK + ++ + W YG+PV+ Sbjct: 114 GVKRFIYTASSSCYGIPDVTPTPETAEMRPMYPYALTKMAGEFYAMHWAQCYGLPVVSLR 173 Query: 184 CSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP + + + + + G + GDG RD+ +V D A + + Sbjct: 174 LFNVYGPRSRTSGTYGAVFGVFLAQKLAGKPYTIVGDGNQSRDFTFVTDVADAFFTASES 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 N+G + + L++ L +I RPG D++ Sbjct: 234 NLTNVVMNVGSGGH-------YSVNRLVELLGGDK-------TYIPKRPGEPDITFADTT 279 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +I +GW + ++E G V LDN +WR Sbjct: 280 RIHDLLGWKAKVSLEEG----VKIILDNIDYWR 308 >gi|218438953|ref|YP_002377282.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] gi|218171681|gb|ACK70414.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] Length = 317 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 28/327 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVDI 59 IVTG AGFIGS L + L+ + +V+ ID++ Y +L+ ++ F ++ DI Sbjct: 5 IVTGVAGFIGSHLAQALLKQGE-RVIGIDQINDYYDPQFKRQNLQTLTHDPNFELIEADI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSC 117 + + + D I + AA++ V R+ G + T NI T I+LE T+ Sbjct: 64 QGLDWQKLLID---VDVIYHQAAQAGV-RASWGESFRLYTERNINATQIILEATK----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K R + ST VYG+ + E + P SPY TK +++ L + +G+ Sbjct: 115 ---EAKSLKRLVVASTSSVYGNAETLPTPETICPQPVSPYGITKLAAERLCWLYHQNFGV 171 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 PV YGP P+ I + +YGDGQ RD+ +V D + A L Sbjct: 172 PVTALRYFTVYGPRQRPDMAFHKFFKAAIADEGISIYGDGQQTRDFTFVSDIIGANLAAA 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 K +GE +NIGG + DI+ ++ ++ + + Y IE G R Sbjct: 232 TIKEAVGEVFNIGGGSRVVLADILDKMETIIGRPLRREY--------IEKARGDARHTGA 283 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + +G++PQ ++ GL + W Sbjct: 284 DITKAQKILGYYPQVSLTEGLTQEWEW 310 >gi|220916296|ref|YP_002491600.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954150|gb|ACL64534.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 352 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 46/349 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVD 58 R++V GGAGFIG+ L L++ +V ++D L +G NL L+ + + + D Sbjct: 5 RVLVVGGAGFIGANLAHRLLSS-GTRVRLLDSLARSGVERNLAWLRA-THGDRLEVITGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + A++ A+ + AA+ V S++ + N GT +LE R Sbjct: 63 VRDPGAVARAVE--GASAVFHLAAQVAVTTSLVDPVQDFEVNARGTLNVLEAVR------ 114 Query: 119 SQDKKDQFRF-LQISTDEVYGSLDKGLFSED----MPYNPS--------------SPYSA 159 ++D F L ST++VYG+L+ L + P +P SPY Sbjct: 115 ---RQDPPPFVLFTSTNKVYGALEDVLLEDAGRRYAPVDPGLHRGISEARNLAFHSPYGC 171 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGD 216 +K +++ VL W TYG+P + S YGP+ F + + + + + + LYGD Sbjct: 172 SKGAAEQYVLDWARTYGVPATVFRMSCIYGPHQFGTEDQGWVAHFLIQAMARRPITLYGD 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+VED + A ++ R G +N+GG + + ++ + + + Sbjct: 232 GKQVRDILFVEDLLDAFLAARERPREVAGRAFNLGGGPD-NTVSLIELLELIEALEGARP 290 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 E R + R Y D S GW P+ ++ G+ + W Sbjct: 291 RVTLEPWRLAD-----QRWYVSDPSTFAVLAGWAPRTGVQEGVRRLHAW 334 >gi|331002851|ref|ZP_08326364.1| hypothetical protein HMPREF0491_01226 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413144|gb|EGG92518.1| hypothetical protein HMPREF0491_01226 [Lachnospiraceae oral taxon 107 str. F0167] Length = 345 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 34/339 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDI 59 + ++TG G +GS L +L+ + ++ + + + N++ L E +++ + F D+ Sbjct: 4 KALITGITGMVGSHLADFLLEETDWEIYGVCRWRSPLDNVDHLLERVNRKDRVFFEYADL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + + E +P+ I + AA+S+ S + + TNI+GT LLE + + Sbjct: 64 NDQMSLYRVVSEIKPEYIFHLAAQSYPQTSFTAPIDTLNTNILGTCRLLEAVHV---AMK 120 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D K + ++ EV+G + DK +ED P++P+SPY+ +K +D + + Sbjct: 121 ADDKYKPVIHVCASSEVFGKIPADKKPEDGINEDCPFHPASPYAISKVGTDLVGRYYAEA 180 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVED 228 +G+ V+ + + GP F E I MIE V G+ +++R + V D Sbjct: 181 FGMVVMTTRMFTHTGPRRGDVFHESTFAKQIA-MIEAGMLPPVVKVGNLKSLRTYADVRD 239 Query: 229 HVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED- 286 VRA Y+++ K + GE YNIGG E+G L+ALI S + I+ ED Sbjct: 240 AVRAYYILVTKNPVAGEYYNIGGR-------YTCEVGDTLEALINMS-PMKDQIKVEEDP 291 Query: 287 ---RPGHDRRYAIDSSKIKSEIGWFP----QENMESGLN 318 RP D K + GW P ++ ME LN Sbjct: 292 ERLRPIDADLQVPDCRKFTAHTGWEPVIPFEQTMEDLLN 330 >gi|72383517|ref|YP_292872.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. NATL2A] gi|72003367|gb|AAZ59169.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. NATL2A] Length = 348 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 39/348 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFS----F 54 ++VTG AGFIG+AL + L+N L +V+ ID L Y+ +L + L EI + + + F Sbjct: 10 ILVTGAAGFIGAALVKALLN-LNFKVIGIDNLNDYYSTSLKRSRLTEIEKVSTVNGEWFF 68 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ I D + ++ + + P V+ AA++ V SI +I +N++G +LE R Sbjct: 69 YEIPIEDNKVLQDIINRYNPQVFVHLAAQAGVRYSITNPAAYIQSNLVGFANVLEGCR-- 126 Query: 115 WSCLSQDKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWG 172 ++Q + S+ VYG F E+ N P S Y+ATK S++ + + Sbjct: 127 --------QNQIPHLIYASSSSVYGGNKNLPFYEEQAVNHPVSLYAATKKSNELMAHTYS 178 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDH 229 H Y +P YGP+ P+ + P+ R I E VF YG Q RD+ Y++D Sbjct: 179 HLYDLPTTGLRFFTVYGPWGRPD-MAPMIFARSILNNEPIQVFNYGKMQ--RDFTYIDDV 235 Query: 230 VRALY-LVLKKGRIGERYN--IGGNNERKNIDIVFEIG--------FLLDALIPKSYSHT 278 V + KK I + +N + + +F IG + ++ L+ K+ Sbjct: 236 VEGIIRCCFKKASIDDDFNPLVPNPSTSSAPYRIFNIGNSRPTQLTYFIE-LLEKNLGKK 294 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F +PG A + S + + P ++E+G+ WYLD Sbjct: 295 AIKNFQPMQPGDVVSTAARMDLLNSWVDYKPITSIENGIKLFSEWYLD 342 >gi|86142323|ref|ZP_01060833.1| NAD dependent epimerase [Leeuwenhoekiella blandensis MED217] gi|85831075|gb|EAQ49532.1| NAD dependent epimerase [Leeuwenhoekiella blandensis MED217] Length = 334 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 158/336 (47%), Gaps = 30/336 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS L L+ + + V +D L+ G +++ + + F+F++ DI D Sbjct: 11 VLVTGGCGFIGSNLIEALL-EAEAFVTCLDDLS-TGKKKNIEPFLERDNFTFIEGDIRDF 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A++ + + + AA V RS+ + N+ G ++E +RL Sbjct: 69 ETCKKAVEGCE--YVSHQAALGSVPRSLKTPLLTHSVNVTGFLNMMEASRLAGVS----- 121 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ ++ YG + E P SPY+ TK ++Y + YG + Sbjct: 122 ----KFVYAASSSTYGDNEALPKIESEIGRPLSPYAVTKLVNEYYAGVYKRNYGFNSIGL 177 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 N +GP P +IP I+ ++ + GDG RD+ Y+++ V+A L L Sbjct: 178 RYFNVFGPKQDPNGAYAAVIPKFISSLMNNESPVINGDGSFSRDYTYIDNVVQANLLALV 237 Query: 238 --KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI----RFIEDRPGHD 291 K + E YNI I++V L D L+ +YS ++LI +F +RPG Sbjct: 238 TDNKNALNEVYNIAYGERTSLIELV---NLLKDRLL--NYS-SDLIDVQPKFGPERPGDV 291 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +K K+ +G+ P+ ++E+G+NK + WY N Sbjct: 292 PHSLASIAKAKNLLGYDPEYDLEAGINKAIDWYKQN 327 >gi|149197673|ref|ZP_01874723.1| putative udp-glucuronic acid epimerase [Lentisphaera araneosa HTCC2155] gi|149139243|gb|EDM27646.1| putative udp-glucuronic acid epimerase [Lentisphaera araneosa HTCC2155] Length = 344 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 47/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEI---------SQ 48 ++++TG AGFIG L + L+ +L +V+ ID L Y NL + L+E+ ++ Sbjct: 5 KILITGVAGFIGFHLAKKLI-ELDFEVVGIDNLNDYYDVNLKLSRLQELGIAKKQHTSTK 63 Query: 49 SNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL 108 F+F ++ + D++ + ++ DA+ N AA++ V SI +E+I +N++G LL Sbjct: 64 HRNFTFKKIALQDKDSLDKLFRDEDFDAVCNLAAQAGVRYSIENPNEYIQSNLVGFGNLL 123 Query: 109 EETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYL 167 E R + + + S+ YG FSE + P S Y+ATK S++ + Sbjct: 124 EACRHF---------NIKHLVYASSSSFYGLNSLSPFSESHTTDHPVSLYAATKKSNEMM 174 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 ++ H Y +P YGP+ P+ + L ++ + ++ +G+ RD+ Y++ Sbjct: 175 AHSYSHLYDLPTTGLRFFTVYGPWGRPDMALFLFTDAILNNREIKVFNNGEMSRDFTYID 234 Query: 228 DHVRALYLVL---------KKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIP 272 D V +Y L K R E YNIG N+ +D + I Sbjct: 235 DIVDGIYKALLSPPKRTQEDKLRTDNSSAPYELYNIGNNSPVPLMDFI--------RAIE 286 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 KS ++ +PG D +KI + + P +++ G+++ V WY Sbjct: 287 KSTGIEAKKNYMPLQPGDVVSTHADCTKIIQNLHYSPSTSLQKGVDQFVQWY 338 >gi|170755592|ref|YP_001782294.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] gi|169120804|gb|ACA44640.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] Length = 305 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L + + V +ID L+ GN+N++ + ++ + L +I Sbjct: 1 MKILVTGGAGFIGSNLVDKFIG-MGNDVCIIDNLS-TGNINNVNKKARLYINDILDSNIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 59 N------IFKKEKFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + K SH E + E R G + + Sbjct: 224 YNGS-RNLFNIGTGVYTTVKDLA---QMMIDTM--KVQSHIE---YQEARKGDIEKSHFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ N++ GL KT+ +Y DN Sbjct: 275 IEKAKVELKWEPKYNLQKGLIKTINYYKDN 304 >gi|308187043|ref|YP_003931174.1| nucleotide-diphosphate sugar epimerase [Pantoea vagans C9-1] gi|308057553|gb|ADO09725.1| putative nucleotide-diphosphate sugar epimerase [Pantoea vagans C9-1] Length = 335 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/349 (26%), Positives = 150/349 (42%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG + + L+ QV+ ID L Y NL L I + F+F++ Sbjct: 1 MNFLVTGAAGFIGFHVSQRLLA-AGHQVVGIDNLNDYYDVNLKHARLDLIKADSGFTFIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I S + +++ A++ V SI + +N+IG +LE R Sbjct: 60 MDLADRDAIASLFDQHTFQRVIHLGAQAGVRYSIENPHAYADSNLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHL--LYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + MI G + +Y GQ RD+ Y++D A+ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMIAGEAIDVYNQGQMKRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + ++ + I K+ Sbjct: 231 LQDVIPQQDDNWTVETGSPATSSAPYRVYNIGNSQPVTLMNYI--------EAIEKALGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T + +PG + D+ + IG+ PQ +E G+ V WY D Sbjct: 283 TAKKNLMPMQPGDVLETSADTEALYKAIGFKPQTGVEEGVKNFVDWYRD 331 >gi|228911100|ref|ZP_04074907.1| UDP-glucose 4-epimerase [Bacillus thuringiensis IBL 200] gi|228848604|gb|EEM93451.1| UDP-glucose 4-epimerase [Bacillus thuringiensis IBL 200] Length = 330 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 43/326 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G R S K K ++GW P Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDP 305 >gi|226950090|ref|YP_002805181.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|226841170|gb|ACO83836.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 305 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFI S L L++ + V +ID L+ GN+N++ + ++ DI Sbjct: 1 MKILVTGGAGFIASNLVDKLIS-MGNDVCIIDNLS-TGNINNVNKKAR-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 54 DSN-ISSIFKKERFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + K SH E + E R G + + Sbjct: 224 CNGS-RNLFNIGTGVYTTVKDLA---QMMIDTM--KVQSHIE---YQEARKGDIEKSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ N++ GL KT+ +Y DN Sbjct: 275 IEKAKVELKWEPKYNLQKGLIKTINYYKDN 304 >gi|148263747|ref|YP_001230453.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146397247|gb|ABQ25880.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 309 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 146/332 (43%), Gaps = 39/332 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 MR +VTGGAGFIGS L + L+ D +V V+D L Y N+ + E+ ++ D Sbjct: 1 MRTLVTGGAGFIGSNLVKQLLKDGH-EVTVLDNLLSGYRSNIATFPEV------CLIEGD 53 Query: 59 ICDRECIRSALKEFQPDAIVNFAA----ESHVDRSILGADEFITTNIIGTFILLEETRLW 114 I D + A+K + + + AA + +D IL A+ N+IGT +LE R Sbjct: 54 IRDDVVVAEAMKGVE--VVFHLAASVGNKRSIDHPILDAE----INVIGTLKILEAAR-- 105 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K + + S+ ++G L ED P P SPY +TK + L++ Sbjct: 106 -------KFGIRKIVASSSAGIFGELKTLPIKEDHPVEPDSPYGSTKLCMEKECLSYAKL 158 Query: 175 YGIPVLLSNCSNNYG---PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 Y + + N YG + +IP+ +M+ G + ++GDG+ RD+L V D V+ Sbjct: 159 YDLEAVCLRYFNVYGLNQRFDAYGNVIPIFAYKMLRGEPLTIFGDGEQTRDFLDVRDVVQ 218 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A + +NI + R I+ + E+ A+ P L++ RPG Sbjct: 219 ANIKAAMTLGVSGAFNI-ASGSRITINRLVELLSAASAINP-------LVQHGPPRPGDV 270 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D + P+ N+E GL + + W Sbjct: 271 MHSLADIRAAHEAFDFTPEINLEDGLREYMVW 302 >gi|85714999|ref|ZP_01045984.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A] gi|85698196|gb|EAQ36068.1| NAD-dependent epimerase/dehydratase [Nitrobacter sp. Nb-311A] Length = 339 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG L L+ + +V+ ID L Y L L+ + + + F F++ D Sbjct: 6 ILVTGAAGFIGFHLTDRLLKQGR-RVVGIDSLNDYYDPALKDGRLEILRRDSHFRFVKAD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + E + +++ AA++ V S+ +I +N+ +LE R +C Sbjct: 65 LADREAAAALFAEHRLSVVLHLAAQAGVRYSLQNPGAYIDSNLTAFANVLEGCR--HACC 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L S+ VYG+ K FS D +P S Y+ATK S++ + A+ H Y + Sbjct: 123 PH-------LLFASSSSVYGANTKLPFSVHDNVDHPISLYAATKKSNELMAHAYSHLYRV 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP++ P+ + ++ G + L+ G RD+ YV+D V A+ ++ Sbjct: 176 PTTGLRFFTVYGPWYRPDMALYKFADAIVGGRPIKLFNHGNMQRDFTYVDDVVEAVVRLI 235 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 YNIG N + + +V +L+ K++ + Sbjct: 236 DHAPRANANWSGDAPDAGTSSAPWRIYNIGNNKPAELMSVV--------SLLEKAFGRSV 287 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D + ++G+ P ++E G+++ WY Sbjct: 288 QKELLPMQPGDVQTTFADIDDLIRDVGFRPSTSLEDGIHRFAAWY 332 >gi|317506831|ref|ZP_07964604.1| NAD dependent epimerase/dehydratase [Segniliparus rugosus ATCC BAA-974] gi|316254867|gb|EFV14164.1| NAD dependent epimerase/dehydratase [Segniliparus rugosus ATCC BAA-974] Length = 314 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 23/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDI 59 MR +VTGGAGFIGS L L+ D +V V+D L+ +G +L + +++ F L +VD+ Sbjct: 1 MRALVTGGAGFIGSTLVDRLLADGH-EVGVLDDLS-SGKAGNLVQAERNDRFQRLWEVDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L + +P+ + + AA+ V +S+ N++GT + + Sbjct: 59 -NSPAVADVLADSKPEVVFHLAAQIDVRKSVADPAHDARVNVLGTV-----NLALAAAAA 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F S +YG E+ P P SPY+A+KA + + + +G+ Sbjct: 113 GARKIVF---TSSGGSIYGDPTGFPVDEETPVAPLSPYAASKACGELYLNMFRRLHGLDC 169 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P +I + ++ G ++G G N RD++YV+D V A L Sbjct: 170 SHLALANVYGPRQNPHGEAGVIAIFAGALLAGKPTKVFGAGTNTRDYVYVDDVVDAFVLA 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GER+NIG E + + L +L+ ++ + F R G R + Sbjct: 230 SGASGGGERFNIGTGVETSDRE--------LHSLVAQAVGVPDDPEFAPARLGDLARSCL 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K +S +GW P ++ G+ ++V ++ Sbjct: 282 DPAKARSVLGWEPSTDLAEGIRRSVAYF 309 >gi|237725319|ref|ZP_04555800.1| DNTP-hexose dehydratase-epimerase [Bacteroides sp. D4] gi|229436006|gb|EEO46083.1| DNTP-hexose dehydratase-epimerase [Bacteroides dorei 5_1_36/D4] Length = 337 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 158/353 (44%), Gaps = 49/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGG GF+GS L ++ + ++ +ID L G+ ++L + F + D+ Sbjct: 1 MRYLITGGCGFVGSNLAAEVLRRGE-ELYIIDNLFRFGSADNLTWLRTLGEFKYYPFDVR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE +PD I + A + + SI TN +GTF LL+ R + S Sbjct: 60 NINDVETVIKEVKPDYIFHLAGQVAMTTSIANPRLDYETNALGTFNLLDSVRKY----SP 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED----------------MPYNPSSPYSATKASS 164 D L ST++VYG + F E+ + + SPY +K + Sbjct: 116 DS----VILYSSTNKVYGDFEYLHFKEESTRYVCEEYPDGFPETISLDFHSPYGCSKGCA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH-----------FPEKLIPLAITRMIEGSHVFL 213 D +L + YG+ ++ S+ YG F +K L I + + Sbjct: 172 DQYLLDFHRIYGLKTIVFRHSSMYGTNQHATYDQGWIGWFCQK--ALEIKNGVSKEPFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL- 270 G G+ VRD L+ ED V LY K K G+ +NIGG E ++ ++ G L + L Sbjct: 230 SGTGKQVRDVLHGEDIVN-LYFTAKDVKEAYGQVFNIGGGIE-NSLSLLELFGILEEKLS 287 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I SY + R + + D +K++S +GW P+ + E GLN+ + W Sbjct: 288 IKMSYKQ------LPWRESDQKVFVADYTKVQSIVGWKPKISKEDGLNRMLDW 334 >gi|254558773|ref|YP_003065868.1| dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] gi|254266051|emb|CAX21803.1| putative dTDP-glucose 4,6-dehydratase [Methylobacterium extorquens DM4] Length = 346 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 41/334 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D L G ++L +S F F++ DI + Sbjct: 8 VLVAGGAGFIGSHLVDALLAR-GARVVALDSL-LTGRRDNLAHLSHEPRFEFVEADITE- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L F+ + N A + + T+++GT LLE R Sbjct: 65 --PLPRLPRFE--RVFNLACAASPPHYQADPIHTMLTSVVGTLRLLERAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHTY 175 D RFLQ ST EVYG D + + Y NP+ P Y K +++ L + Sbjct: 111 NDGARFLQASTSEVYG--DPLVHPQPEAYWGNVNPTGPRACYDEGKRAAETLAFDFERGQ 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ I + + + V +YGDG+ R + YV D V L Sbjct: 169 GLEVRVARIFNTYGPRMRADDGRVVSNVICQALADAPVTVYGDGEQTRSFCYVTDLVEGL 228 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L+ + G N+G E ++V + + + + + ++R D P Sbjct: 229 MRLMACEAAPGGPVNLGNPREMTVAELVSLVAEM-------TGTRSPVVRRPLPVDDP-- 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ ++ +GW P+ +E GL T+ W+ Sbjct: 280 -QRRRPDIARAQALLGWSPKVALEQGLEATIAWF 312 >gi|228996406|ref|ZP_04156048.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] gi|228763369|gb|EEM12274.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] Length = 304 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + +L+ + I +V+D L N +++ F DI Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLEN-NIDTVVVDNLVTGHKYNIPSKVA------FYHFDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E +PD +++ AA+ V S+ + N++ T +L+ +C+ Sbjct: 54 DPNIDKIFMVE-KPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQ------ACIKY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + ST VYG+ E NP S Y +K +S+ + + YG+ Sbjct: 107 NVK---KIIYASTAAVYGNPQYLPIDEKHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P+ +I + + R+ + +YGDG RD+++V+D A +L Sbjct: 164 ILRYSNVYGARQNPDGEAGVISIFMDRLFKNDSPIIYGDGNQTRDFIFVKDVAHANFLAF 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + NI N + + LLD + + I + E+RPG + Sbjct: 224 RNAD-NQICNISSNQQ-------ISVNELLDTICNLMKIEDKRI-YKEERPGDVIHSYLS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K K + W P+ ++ GL +T+ ++ Sbjct: 275 NDKAKKYLNWQPKCSLLKGLEETISFF 301 >gi|325685523|gb|EGD27615.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 329 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 159/347 (45%), Gaps = 50/347 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS R LV D V+V+D L + G+ ++ + ++ F QVD+ Sbjct: 1 MRILVVGGAGYIGSHAVRRLVADGN-DVVVLDSL-FTGHKEAIDQKAK-----FYQVDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL---EETRLWWSC 117 D++ + LK+ + +A+++FAA S V S+ ++ N+ G LL EET + + Sbjct: 54 DKDAVADVLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLV 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S S+ YG +K +E+ P NP +PY TK + ++ GI Sbjct: 114 FS------------SSAATYGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVR 221 V ++ + G H PE LIP + + G F ++G DG NVR Sbjct: 162 KSIALRYFNVAGASLDGSIGEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVR 221 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++V D + A L LK + + +N+G N++I+ + IP + Sbjct: 222 DYVHVVDLIDAHVLALKHLMETNQSDVFNLGTATGFSNLEILKAAIKVTGVDIPYTIG-- 279 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ------PRRGGGPDSLVADSSKARKVLGWSPKYENVDDIIASAWNWH 320 >gi|225180900|ref|ZP_03734348.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] gi|225168381|gb|EEG77184.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] Length = 306 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 35/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS---FLQV 57 ++++VTGGAGFIGS + L+ +V+V+D L S+SN+ + F +V Sbjct: 2 LKVLVTGGAGFIGSHIVDLLIQK-GYEVVVVDNLVTG---------SKSNVNAHAVFYEV 51 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + I +K+ P+ I++ AA V +SI T N IGT LL L Sbjct: 52 DILHPQ-IDEVIKKEAPEVILHQAALVFVQQSIKDPLADGTVNTIGTLNLLRSAHL---- 106 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF+ ST VYG + +ED P +P S Y A+K + V + Y + Sbjct: 107 -----NNVGRFIYASTCAVYGDAQGRVATEDDPVSPISFYGASKYMGEMYVRLFYDLYKL 161 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +N YGP P +IP+ + M + ++G G RD++YV+D A Sbjct: 162 DYTILRYANVYGPRQQPHGEGGVIPIFMQNMKKEISPTIFGTGLQSRDFIYVQDVATANL 221 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L + KG+ + NIG D+ I +L +P Y EL+ G + Sbjct: 222 LAIAKGK-QQTLNIGTGVATSIYDLHQHINEILGRNLPAQYK-PELM-------GDVKHI 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 A++ + + E+ W +++ GL +T Y Sbjct: 273 ALNPERAQKELNWKTGYSLKKGLAETAAVY 302 >gi|168180874|ref|ZP_02615538.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] gi|182668248|gb|EDT80227.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] Length = 330 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 159/335 (47%), Gaps = 21/335 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV +L +V + + N +++ + + N+ + + D Sbjct: 7 KVLVTGSEGFIGSHLTERLV-ELGAEVTALVQYNSFNNWGWIDTFSKEVKDNI-NIVTGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + + ++ +K D + + AA + S L ++ TNI GT +LE R + Sbjct: 65 IREYDGMKRIIK--GQDVVFHLAALIAIPYSYLSPMAYVKTNIEGTTNVLEACREY---- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + ST E YG+ E P + SPYSA+K +D + ++ ++ +P Sbjct: 119 -----EVEKIVHTSTSETYGTALYVPIDEKHPMHGQSPYSASKIGADKIAESFYRSFNLP 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ N YGP +IP I++++ G RD+ YV D V A V + Sbjct: 174 VVTIRPFNTYGPRQSARAVIPTIISQILAEKTEIKLGGLSPTRDFNYVIDTVEAFIKVAE 233 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + IG+ N+G N E D V +I ++ + K E IR ++ +R +A D Sbjct: 234 SNKTIGQVINVGSNYEISIGDTVRKIINIIGKDV-KILCDEERIR--PEKSEVNRLWA-D 289 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + KIK W P+ +++ GL +T+ W +N +++ Sbjct: 290 NRKIKELTSWNPRYSLDDGLKETIEWIRNNMKYFK 324 >gi|305666594|ref|YP_003862881.1| putative UDP-glucuronic acid epimerase [Maribacter sp. HTCC2170] gi|88708865|gb|EAR01100.1| putative UDP-glucuronic acid epimerase [Maribacter sp. HTCC2170] Length = 341 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 49/354 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNL----- 51 MR+++TG AGFIG L + LV + V+ +D + Y NL LKE+ S Sbjct: 1 MRVLITGAAGFIGFYLSKALVANGH-YVVGLDNINDYYDVNLKYARLKELGISRTSSEPY 59 Query: 52 -----------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 F F+++ + DRE + + K+ D + N AA++ V S+ + ++ +N Sbjct: 60 NNMTASTILKDFYFVRLGLEDRENLPNLFKKECFDVVCNLAAQAGVRYSLENPEAYMDSN 119 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSA 159 ++G +LE +C D K + S+ VYG +K F + D NP S Y+A Sbjct: 120 MVGFLNILE------NCRHNDIK---HLVYASSSSVYGLNEKVPFETTDAVDNPISLYAA 170 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 TK S++ + + H YG P YGP+ P+ + L ++ G + ++ G+ Sbjct: 171 TKKSNELMAHTYSHLYGFPTTGLRFFTVYGPWGRPDMAMFLFTDAIVNGKPIKVFNHGKM 230 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFLLDAL 270 RD+ Y++D V+ + L++ +G R YNIG N + +D + E Sbjct: 231 ERDFTYIDDIVQGVTLII-EGDTSNRKTISDLYKIYNIGNNKSVRLMDFIEE-------- 281 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +S + +PG + + + + + P +E G+ + V WY Sbjct: 282 IEQSLGINAKKEMLPMQPGDVGKTWANVEDLVRDYNYSPNTPIEKGVKEFVIWY 335 >gi|300868569|ref|ZP_07113186.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506] gi|300333447|emb|CBN58378.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506] Length = 316 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/324 (28%), Positives = 145/324 (44%), Gaps = 22/324 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNLFSFLQVDICDR 62 IVTG AGFIGS L L+N K V+ +D+ Y + K IS +++ D Sbjct: 5 IVTGAAGFIGSHLVETLLNQGK-NVIGVDQFNDYYDSALKRKNISNFENNPAFKMEEGDI 63 Query: 63 ECIR-SALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + S+L E + + I + AA++ V S G + NI T +LLE + Sbjct: 64 LALNWSSLLE-ETEVIYHQAAQAGVRASWGEGFRAYTERNINATQVLLEAAK-------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + RF+ S+ +YG+ + SE P SPY TK S + L + +G+P Sbjct: 115 DAPNLNRFVYASSSSIYGNAESFPTSETACPQPVSPYGITKLSGERLCFLYYKNFGVPAT 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 YGP P+ ++ + +YGDGQ RD+ +V D + A L Sbjct: 175 ALRYFTVYGPRQRPDMAFHKFFKAILLDEAITIYGDGQQTRDFTFVSDCIAANLAAANVP 234 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 +GE +NIGG + ++ EI ++ ++ + I FIE G R + D S Sbjct: 235 ESVGEVFNIGGGSRV----VLAEIIKTMEKIVGRPIR----ISFIESAMGDARHTSADVS 286 Query: 300 KIKSEIGWFPQENMESGLNKTVCW 323 K + +G+ PQ ++ GL K W Sbjct: 287 KAEQILGYQPQVSLVEGLTKEWQW 310 >gi|303231086|ref|ZP_07317826.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514217|gb|EFL56219.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 305 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 28/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGGAGFIGS L L+ L VLVID L+ ++E F+++D+ Sbjct: 1 MRVCVTGGAGFIGSHLVDRLIA-LGHTVLVIDNLS-----TGVREFVNPEA-RFVEMDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I S +F+P + + AA++ V S+ N++G +LE R Sbjct: 54 DSN-IDSIFADFKPQVVFHEAAQTMVPASMENPKMDCDVNLMGLINMLEAAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + FL S+ VYG LD +E M P+S Y TK +++ + + +G+ + Sbjct: 105 -KHEVEHFLMPSSAAVYGDLDTLPLTEAMSGKPTSFYGLTKLTAEGYLRIYEQAFGLKTV 163 Query: 181 LSNCSNNYGPYH--FPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP E + R++ E + ++GDG+ RD++YV D V A + Sbjct: 164 CFRYANVYGPRQGDGGEGGVISIFNRLVNEDKPLTIFGDGEQTRDFVYVADVVEANIKAM 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + YNI N ++V + I +Y +R G R + Sbjct: 224 NHPDLTGIYNISTNTSTSVNELVAYFTSISGKQIATNYE--------AERVGDIRHSRLC 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K K + G+ +E GL T+ ++ Sbjct: 276 NEKAKKDFGFEATIGLERGLGDTLSYF 302 >gi|302038999|ref|YP_003799321.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] gi|300607063|emb|CBK43396.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] Length = 307 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 157/330 (47%), Gaps = 28/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + V+V+D L G ++ + +Q F ++DI Sbjct: 1 MKVLVTGGAGFIGSHVVDRLLQEGH-DVVVVDNLV-TGKRKNVPKAAQ-----FYKLDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + R + +P + + AA+ +V RS+ N++GT +LE+ S+ Sbjct: 54 NPKLER-IFRNERPSIVFHLAAQMNVRRSVEDPMFDAQVNVLGTLNVLEQA-------SK 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F S +YG E P SPY +K ++ + + GI V+ Sbjct: 106 HGARKVIFSS-SGGAIYGEQLAFPAPETHITQPLSPYGISKLCGEHYLGYYHRLSGIQVV 164 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP PE ++ + I +M+ G + G+G+ RD+++VED V + + + Sbjct: 165 SLRYANVYGPRQDPEGEAGVVAIFIQKMLRGEQAVVNGNGRQTRDFVFVEDVVESNLMAM 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + YN+G E +++ +F+I L + K H R G R ID Sbjct: 225 GP-EVEGVYNVGTGIE-TSVNDLFKIVVDLTKVEFKEV-HGPAKR------GEQARSVID 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S+K+ ++GW P+ ++ GL +TV ++ D Sbjct: 276 STKLHRDLGWEPKVDLREGLRRTVEYFRDG 305 >gi|316935543|ref|YP_004110525.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] gi|315603257|gb|ADU45792.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] Length = 327 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 30/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQVD 58 ++VTG AGFIG + R L+ + V+ +D L + A L ++ FSF++ D Sbjct: 6 VLVTGAAGFIGYHVARELLEAGR-SVVGLDSLNHYYDPALKQARLDLLTPYPGFSFVRGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + +++ AA++ V S+ ++ +N+ G +LE R C Sbjct: 65 LADRSATAELFATRRFPVVIHLAAQAGVRHSLSHPHDYADSNLEGFLNVLEGCR-HHGCE 123 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ K FS D P + P S Y+ATK +++ + + H Y + Sbjct: 124 --------HLIYASSSSVYGANTKLPFSVDDPTDHPISLYAATKKANELMAHCYSHLYRL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA---LY 234 P YGP++ P+ + L + EG + L+ GQ RD+ YV+D R L Sbjct: 176 PTTGLRFFTIYGPWYRPDMALYLFAKAITEGRPIKLFNHGQMRRDFTYVDDVTRVVTRLI 235 Query: 235 LVLKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ++ GR G YN+G ++ + + +V AL+ ++ + + +PG Sbjct: 236 DLVPTGRDGHAPARVYNVGNHSPEELMHVV--------ALLERALGRPAVREMLPMQPGD 287 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++G+ P +E G+ V W+ Sbjct: 288 VPATFADVEALVRDVGFRPSTPIEDGIGAFVAWF 321 >gi|117924370|ref|YP_864987.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] gi|117608126|gb|ABK43581.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] Length = 329 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 133/327 (40%), Gaps = 32/327 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAGFIGS LC L+ V +D + N I+ F+ + DI Sbjct: 1 MIALVTGGAGFIGSHLCEMLLEQGHT-VRALDNFSTGRRANVAHLINHPK-FTLYEGDIR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + + + + + A + + S+ + N+ GT +LE R Sbjct: 59 DPETLVTPFQGV--EWVFHLAGLADIVPSVENPTTYFEVNVHGTLNVLEFAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ++ YG + E+ P P PY+ TK + LVL W + Y +P L Sbjct: 109 -RNQAKRLVYAASSSSYGIPELYPTPEESPIQPQYPYALTKYMGEELVLHWANVYKMPNL 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP + + + + + + GDGQ RD+ YV D A Y Sbjct: 168 SLRMFNVYGPRSRTTGAYGAVFGVFLAQRLNNKPYTVVGDGQQSRDFTYVTDVCAAFYAA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + +GE +N+G + +V +G I +I RPG Sbjct: 228 AQSTWVGEAFNVGSGGHQTINRLVELLG--------------GEITYIPKRPGEPDCTFA 273 Query: 297 DSSKIKSEIGWFPQENMESGL-NKTVC 322 D+ KI +++ W Q + E G+ N C Sbjct: 274 DTRKIHAKLNWQAQVSFEQGVANMLAC 300 >gi|256957490|ref|ZP_05561661.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis DS5] gi|307268193|ref|ZP_07549578.1| NAD-binding domain 4 [Enterococcus faecalis TX4248] gi|312953022|ref|ZP_07771875.1| NAD-binding domain 4 [Enterococcus faecalis TX0102] gi|256947986|gb|EEU64618.1| NAD-dependent epimerase/dehydratase [Enterococcus faecalis DS5] gi|306515462|gb|EFM83992.1| NAD-binding domain 4 [Enterococcus faecalis TX4248] gi|310629051|gb|EFQ12334.1| NAD-binding domain 4 [Enterococcus faecalis TX0102] gi|315034425|gb|EFT46357.1| NAD-binding domain 4 [Enterococcus faecalis TX0027] gi|315153909|gb|EFT97925.1| NAD-binding domain 4 [Enterococcus faecalis TX0031] gi|329576917|gb|EGG58400.1| NAD dependent epimerase/dehydratase family protein [Enterococcus faecalis TX1467] Length = 319 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGVEPTLPKRETSMVCPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ ++ + S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPSSPYSGVLSILMDHYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|225873117|ref|YP_002754576.1| exopolysaccharide biosynthesis protein [Acidobacterium capsulatum ATCC 51196] gi|225792353|gb|ACO32443.1| exopolysaccharide biosynthesis protein [Acidobacterium capsulatum ATCC 51196] Length = 320 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 91/344 (26%), Positives = 150/344 (43%), Gaps = 36/344 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGFIGS+L + V + V+ +D L GN +L I + F DI Sbjct: 1 MRILITGAAGFIGSSLAKRAVAEGH-SVIGVDNLI-TGNRENLAAIDAA--IDFRVADIR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE ++ + + I + AA V +S+L N+ GT +L L+ Sbjct: 57 NREQMQELCRGV--EIIFHEAALPSVPKSVLDPLTSHEHNVEGTVSVL---------LAA 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ R + ++ YG E M P SPY+ K + +Y + ++ YG+ + Sbjct: 106 KEQKVRRVVYAASSSAYGESPTLPKHEAMIPAPISPYAVQKLTGEYYMQSFQRVYGMETV 165 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP+ + ++ IT +++G ++GDGQ RD+ Y+++ V A +L Sbjct: 166 CLRYFNVFGPFQAADSPYSGVLAKFITSLLQGEAPTIFGDGQQSRDFTYIDNVVDANFLA 225 Query: 237 LKKGR---IGERYNIGGNNERKNID---IVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 G+ YN+ +D I+ E+ A + F R G Sbjct: 226 ATAPADVVSGKVYNLACGERHSLLDTFRILAEMTGFAGAPV-----------FGAARNGD 274 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D S I E+G+ PQ N E GL +TV WY + PL Sbjct: 275 ILHSLADISLIAREMGYQPQVNFEEGLRRTVAWYAEALKMQTPL 318 >gi|84496590|ref|ZP_00995444.1| putative nucleotide-sugar dehydratase [Janibacter sp. HTCC2649] gi|84383358|gb|EAP99239.1| putative nucleotide-sugar dehydratase [Janibacter sp. HTCC2649] Length = 314 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 39/343 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGF+GS LC L+ +V+ +D G ++ + + F ++ D+ Sbjct: 1 MRVVVTGGAGFLGSHLCETLIRRGD-EVVCLDNF-LTGTPANVAHLMEEPGFQLIRSDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +++FA+ + + E + IGT L L++ Sbjct: 59 DFVHVGGKV-----DLVLHFASPASPIDYLKLPIETLKVGSIGTLHAL--------GLAR 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGH 173 DK R + ST EVYG D + + Y NP P Y K ++ L LA+ + Sbjct: 106 DKG--ARIILASTSEVYG--DPKVHPQPETYWGHVNPVGPRGVYDEAKRYAEALTLAYRN 161 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 T+ + + N +GP P + IP I + + G V + GDG R YV+D V Sbjct: 162 THQVDTGIVRIFNTFGPRMRPNDGRAIPNFIRQSLAGEPVTVAGDGSQTRSICYVDDLVE 221 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A+ L + G NIG +E +D+ ++ I + S +E++ + DRP D Sbjct: 222 AI-LRMADGEHQGPINIGNPHEISMLDLARKV-------ISLTESSSEIV--LIDRPVDD 271 Query: 292 RRYAIDSSKIKSEI-GWFPQENMESGLNKTVCWYLDNNWWWRP 333 + + EI W P+ +M+ GL +T+ W+ + + W P Sbjct: 272 PTVRQPDTTLAREILKWEPKVDMDEGLARTIAWFREVHPWSAP 314 >gi|78188649|ref|YP_378987.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3] gi|78170848|gb|ABB27944.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3] Length = 327 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 31/337 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TGG GFIGS+L R LV V ++D L Y GNL ++ +I L +++ Sbjct: 7 QVLITGGLGFIGSSLARSLVKQ-GAHVTIVDSLIPQYGGNLFNISDIRGK-----LTINV 60 Query: 60 CD-RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 CD R+ D + N A + SH+D S+ + N +LE +C Sbjct: 61 CDVRDPFAMDYLLQGQDYLFNLAGQTSHMD-SMSDPKTDLDINATAQLSILE------AC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F ST ++YG D E P P K + ++ L + + YGI Sbjct: 114 HKTNSDIKIVF--ASTRQLYGKPDYLPVDEKHPIRPVDVNGINKLAGEWYHLLYNNVYGI 171 Query: 178 PVLLSNCSNNYGP----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +N YGP + + + + +IEG + ++GDG +RD+ YV+D V AL Sbjct: 172 RACALRLTNTYGPGMRVKDARQTFLGIWVRLLIEGKPIKVFGDGMQLRDFNYVDDCVDAL 231 Query: 234 YLV-LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 L + G+ YN+G + E + + E+ +++ +Y EL+ F +R D Sbjct: 232 LLAGVNDSANGKVYNLG-STEVVGLKTLAEM--MVNFYDGATY---ELVPFPPERKAIDI 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 Y D S I E+GW P+ ++ GL KTV +Y N+ Sbjct: 286 GDYYSDFSLITKELGWEPKVGLQDGLKKTVAYYQVNH 322 >gi|218528247|ref|YP_002419063.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|218520550|gb|ACK81135.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] Length = 346 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 41/334 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D L G ++L +S F F++ DI + Sbjct: 8 VLVAGGAGFIGSHLVDALLAR-GARVVALDSL-LTGRRDNLAHLSHEPRFEFVEADITE- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L F+ + N A + + T+++GT LLE R Sbjct: 65 --PLPRLPRFE--RVFNLACAASPPHYQADPIHTMLTSVVGTLRLLERAR---------- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHTY 175 D RFLQ ST EVYG D + + Y NP+ P Y K +++ L + Sbjct: 111 NDGARFLQASTSEVYG--DPLVHPQPEAYWGNVNPTGPRACYDEGKRAAETLAFDFERGQ 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ I + + + V +YGDG+ R + YV D V L Sbjct: 169 GLEVRVARIFNTYGPRMRADDGRVVSNVICQALAEAPVTVYGDGEQTRSFCYVADLVEGL 228 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L+ + G N+G E ++V + + + + + ++R D P Sbjct: 229 MRLMACEAAPGGPVNLGNPREMTVAELVSLVAEM-------TGTRSPVVRRPLPVDDP-- 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ ++ +GW P+ +E GL T+ W+ Sbjct: 280 -QRRRPDIARAQALLGWSPKVALEQGLEATIAWF 312 >gi|331695737|ref|YP_004331976.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] gi|326950426|gb|AEA24123.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] Length = 319 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 141/335 (42%), Gaps = 36/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS + LV VLV+D L++ N + ++D+ Sbjct: 1 MRAVVTGGAGFIGSTIVDELVARGD-DVLVVDDLSHGSEANLTSAFAAGTRLE--RLDVR 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +A F+PD + + AA+ V RS+ TN++G+ + + RL + Sbjct: 58 DGAGVAAAFTAFRPDVVFHLAAQIDVRRSMTEPAFDAATNVLGSVNVFDAARLAGA---- 113 Query: 121 DKKDQFRFLQIST-DEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST +YG E P P S Y +K +++ + +G+ V Sbjct: 114 -----RRVVNTSTGGAIYGETSTVPTPETEPARPLSAYGLSKRTAEEYGAWFRRAHGLDV 168 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P +I + R++ G ++GDG RD+++V D A Sbjct: 169 VTLRYGNVYGPRQDPTGDAGVIAIFCDRVLTGRRPTIFGDGTQTRDYVFVGDIAAANLAA 228 Query: 237 LKKGRIG-ERYNIGGNNERKNIDI-------VFEIGFLLDALIPKSYSHTELIRFIEDRP 288 G + YN+G E +D+ G DA P+ F+ R Sbjct: 229 ADAGSPAHDHYNVGTGTE---VDVVELAAAIAEAAGVGADAFAPE---------FLPARA 276 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G R +D S+ ++++G + G+ T+ W Sbjct: 277 GEVLRSCLDVSRARADLGLRAPTPLRDGIATTLGW 311 >gi|220915364|ref|YP_002490668.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953218|gb|ACL63602.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 324 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 33/334 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 +VTG AGFIG L + L++ + VL +D + ++ LKE + L F+F ++D Sbjct: 5 LVTGAAGFIGFHLAKALLDRGDV-VLGVDSMVPYYDVR-LKEARLAQLTGRPGFTFERLD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + A+V+ AA+ V S+ ++ N+ G +LE R Sbjct: 63 LADREATSRLFERGGFGAVVHLAAQPGVRYSLENPHAYVDANVTGFLDVLEGCR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG K F+ D +P S Y+ATK +++ + + H + I Sbjct: 117 ---RHPVRHLVYASSSSVYGGNTKVPFAVTDNVDHPVSLYAATKKANELMAYTYSHLFAI 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P YGP+ P+ + P+ R I EG + ++ GQ RD+ YV+D V + V Sbjct: 174 PATGLRFFTVYGPWGRPD-MAPMLFARAILEGQPIKVFNHGQMRRDFTYVDDIVEGVIRV 232 Query: 237 LKKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L + YNIG + + ++++ I + AL K+ + +PG Sbjct: 233 LDRPPAAGVVPPHRLYNIGNS---QPVELLRFIDVMEAALGKKAVRE-----LLPMQPGD 284 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S ++ ++G+ P ++E G+ + V WY Sbjct: 285 VPATFADVSDLERDVGFRPATSIEEGVRRFVAWY 318 >gi|197122330|ref|YP_002134281.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|220917112|ref|YP_002492416.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|196172179|gb|ACG73152.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|219954966|gb|ACL65350.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 312 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 41/335 (12%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R ++ G AGFIGS L R+L + V +D L G L +L+ + + F FLQ D+ Sbjct: 4 QRAVILGAAGFIGSHLTDRFLAEGWR--VTGVDNLI-TGTLRNLEHLGREPRFDFLQADV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 C I + DA+++FA+ + + E + +G LE R Sbjct: 61 CAPLAISGRV-----DAVLDFASPASPVDYLRHPFETLHVGSVGVENALELAR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 + F+ ST EVYG + E P P + Y K ++ + +A+ Sbjct: 109 ---RSGAPFVLSSTSEVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVAYRRY 165 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + V ++ N YGP + +++P + + + G + ++GDG R + YV+D+V A Sbjct: 166 REVQVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---G 289 ++ +L G + N+G ++E ++ + L+ +P IE RP Sbjct: 226 IWRLL-HGDCQDPVNVGDDHEMTVLEFAQAVQRLVGRTVP-----------IEHRPLPQD 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D ++ + +GW P+ E G+ +T+ W+ Sbjct: 274 DPRVRRPDLTRARERLGWAPRIGFEEGMRRTIDWF 308 >gi|229032885|ref|ZP_04188840.1| UDP-glucose 4-epimerase [Bacillus cereus AH1271] gi|228728430|gb|EEL79451.1| UDP-glucose 4-epimerase [Bacillus cereus AH1271] Length = 330 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWVPQ 306 >gi|257061920|ref|YP_003139808.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8802] gi|256592086|gb|ACV02973.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8802] Length = 332 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 162/346 (46%), Gaps = 50/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+++D L+Y G+ +KE+ + L + D DR Sbjct: 7 ILVTGGAGYIGSHAVLALQKS-GYDVIILDNLSY-GHPELVKEVLKVEL---IVGDTNDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+++FAA V S++ + N++GT LLE + K Sbjct: 62 PLLDQLFANREITAVMHFAAYIAVGESVVNPSIYYRNNVVGTLTLLE-------AMLAAK 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 ++F F ST +YG + +E+ P +P SPY+A+K + ++ + H YG + Sbjct: 115 INKFVF--SSTCAIYGMPQEIPMTENHPQDPLSPYAASKFMVEQILQDFDHAYGFKSVAF 172 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ N G H PE LIPLA +T + + + ++G DG VRD+++V Sbjct: 173 RYFNASGADPQGNLGEDHHPETHLIPLALLTALKKRDSLSIFGTDYETPDGTAVRDYIHV 232 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--- 279 D HV L +L G+ E +N+G N GF + +I + T Sbjct: 233 NDLASAHVLGLEYLLNGGK-SEVFNLGNGN-----------GFSVREVIETAKKITGIDF 280 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 L++ + RPG S K ++ +GW PQ ++E+ ++ W+ Sbjct: 281 LVKESDRRPGDAPILVGSSEKARNILGWQPQYADLETIIDHAWSWH 326 >gi|116754384|ref|YP_843502.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] gi|116665835|gb|ABK14862.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] Length = 343 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 34/333 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS +C L+ V+ +D L+ +G ++++ + ++ F F+Q D+ D Sbjct: 26 ILVTGGAGFLGSWICDALIAQ-GANVVCVDNLS-SGLISNISHLLDADRFEFIQHDVSD- 82 Query: 63 ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + LK Q D +++ A+ + E + N IG L+ R Sbjct: 83 --LSRPLKIDQKLDLVIHMASRASPFEFEHYPIEILKANTIGLMASLDIAR--------- 131 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 R L ST EVYG+ E P P Y K + V+A+ + YG Sbjct: 132 -NHDARLLYTSTSEVYGNPTVVPTPESYNGNVNPIGPRGCYDEAKRCGEAYVMAYRNQYG 190 Query: 177 IPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + V ++ N YGP + +P I + I G + ++GDG R + YV D + Sbjct: 191 LDVRIARIFNTYGPRIRWDCIYARAVPRFIAQAIRGEPITIFGDGTQTRSFTYVTDQIEG 250 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + + G NIG + E ++ E+ ++ I S S ED P Sbjct: 251 LLRLASIDEVKGAVVNIGNDRE----TMIIELAKIV-LKITGSDSGIVYQPLPEDDP--- 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K + +GW P+ +E GL +TV W+ Sbjct: 303 LRRCPDITKARELLGWAPKVALEDGLRRTVEWF 335 >gi|239944818|ref|ZP_04696755.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Streptomyces roseosporus NRRL 15998] gi|239991283|ref|ZP_04711947.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Streptomyces roseosporus NRRL 11379] gi|291448285|ref|ZP_06587675.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 15998] gi|291351232|gb|EFE78136.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL 15998] Length = 328 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 36/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGGAGFIGS L +L+ L +V+V+D + + N L ++ +C Sbjct: 1 MRCLITGGAGFIGSHLTEHLLG-LGHEVVVLDDFSTGSDRNLAPFSGHPGLVRVVRGSVC 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGAD-EFITTNIIGTFILLEETRLWWSCLS 119 DRE + S + DAI + AA V +ILG + + TN+ GT +LE R Sbjct: 60 DRETVESCMPGV--DAIYHLAAAVGV-FTILGNTLDCLRTNLHGTETVLETARAHG---- 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGH 173 L ST E+YG SE+ SP Y+ KA + L +G Sbjct: 113 ------VPILVASTSEIYGKNTADGLSEEADRVLGSPLKNRWSYAEAKALDETLAHLYGV 166 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ ++ N GP + +IP + + + G + ++GDG VR + +V D V Sbjct: 167 EYGVSTVIVRLFNTVGPRQSGQYGMVIPRFVGQALAGEPITVFGDGTQVRCFCHVHDIVP 226 Query: 232 ALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR--- 287 AL +L+ G YN+ GN E+ +I L ++ + S + +++ ++ Sbjct: 227 ALVTLLENADTHGTVYNL-GNAEQISITA------LAQRVVEATGSSSPVVKVPYEQAYG 279 Query: 288 PGHD--RRYAIDSSKIKSEIGWFPQENME 314 PG + +R D ++ + IG+ P+ ++ Sbjct: 280 PGFEDMQRRIPDCTRARERIGFRPRRTLD 308 >gi|311694914|gb|ADP97787.1| UDP-glucuronic acid epimerase [marine bacterium HP15] Length = 335 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/351 (23%), Positives = 155/351 (44%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIGS L L+ D +V+ +D + Y NL LK ++ F+ ++ Sbjct: 1 MKILVTGTAGFIGSHLAHRLL-DRGDEVIGVDNVNDYYDVNLKEARLKRLTDKAGFTEVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR + + E +P+ +V+ AA++ V SI ++ N++G +LE Sbjct: 60 QDVADRAAMEALFAEHKPERVVHLAAQAGVRYSIENPHAYVDANLVGFMNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG+ + FS D +P S Y+A+K +++ + + H Y Sbjct: 114 CRHNKVK---HLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + +++ G + ++ G + RD+ Y++D V + Sbjct: 171 NLPTTGLRFFTVYGPWGRPDMALFIFTKKILAGEPIDVFNHGHHRRDFTYIDDIVEGVIR 230 Query: 236 VLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 L + E YNIG NN E+ ++ +I + Sbjct: 231 TLD--HVAEPNGEWSGATPDPGTSKAPYRLYNIGSNNP-------VELSRFIE-IIEERV 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + + ++G+ P +E G+ + V WY D Sbjct: 281 RKKAQKNLLPLQPGDVPATYANVDDLIDDVGYKPATPVEEGIARFVDWYRD 331 >gi|197105546|ref|YP_002130923.1| dTDP-glucose 4,6-dehydratase protein [Phenylobacterium zucineum HLK1] gi|196478966|gb|ACG78494.1| dTDP-glucose 4,6-dehydratase protein [Phenylobacterium zucineum HLK1] Length = 336 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 38/334 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L + V+ +D G +L+ + + F ++ DI D Sbjct: 9 ILVAGGAGFLGSHLCERLAAE-GAHVVCLDNFQ-TGRRENLQRLEGRDGFQVVEADIVD- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S L + + D + N A + + + T++IGT LL+ + Sbjct: 66 -ALPSRLAKMRFDRVYNLACAASPPLYQADPEHTLMTSVIGTRQLLKLAEASGA------ 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHTY 175 RFLQ ST E+YG D + Y P + Y K +++ L + Sbjct: 119 ----RFLQASTSEIYG--DPASHPQPESYWGNVNCTGPRACYDEGKRAAETLCFDYDRLG 172 Query: 176 GIPVLLSNCSNNYGPY--HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 V + N YGP +++ +++ + G + ++GDG R + YV+D + L Sbjct: 173 KAEVRVVRIFNTYGPRLDASDGRVVSNVVSQALAGEDITVFGDGSQTRSFCYVDDQIDGL 232 Query: 234 YLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 +++ G NIG ER +++V D ++ + S +E++ D P Sbjct: 233 VRLMEYDGAQPGPVNIGNPAERTILELV-------DLVLAMTGSTSEVVHRPLPVDDP-- 283 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D SK + +GW P+ +E GL T+ W+ Sbjct: 284 -RRRRPDISKAERLLGWTPKTPLEQGLRATIAWF 316 >gi|330447135|ref|ZP_08310785.1| short chain dehydrogenase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491326|dbj|GAA05282.1| short chain dehydrogenase family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 334 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 159/347 (45%), Gaps = 42/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA+ L QV+ ID L Y +L L I+ N F+F++ Sbjct: 1 MKYLVTGVAGFIGSAVTERLCAQGH-QVVGIDNLNDYYDVSLKQARLARIAHPN-FTFIE 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + E Q + +++ AA++ V SI + +N++G +LE R Sbjct: 59 LDLADRDGIANLFAEQQFNRVIHLAAQAGVRYSIDNPLAYADSNLVGHLTILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + + S+ VYG K F + D +P S Y+ATK S++ + + H Y Sbjct: 115 ---HNKVEHLVY--ASSSSVYGLNHKTPFNTADSVDHPISLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++EG + +Y G RD+ Y++D V + Sbjct: 170 GVPTTGLRFFTVYGPWGRPDMALFKFTNAIMEGKEIDVYNHGDMRRDFTYIDDIVEGVMR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + K +D I L D+L ++ + Sbjct: 230 IQDVIPQPNADWTVEAGSPATSSAPYRVYNIGHGSPVKLMDY---IEALEDSLGIEAKKN 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F++ +PG D+ + G+ P+ ++ G+ V WY Sbjct: 287 -----FMDMQPGDVYMTYADTEDLFKATGYKPEVKVKEGVQAFVDWY 328 >gi|121533488|ref|ZP_01665316.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] gi|121308047|gb|EAX48961.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] Length = 307 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 28/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L+++ QV V+D L+ N + + F+++D+C Sbjct: 1 MKILVTGGAGFIGSHTVDKLIHE-GCQVTVVDDLSTGRRENVNAQAT------FIEMDVC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D +V+ AA++ V S+ D N++GT +LE R + Sbjct: 54 S-PVLFELFANVKFDGVVHLAAQTSVPVSMDKPDFDCRVNVLGTVNVLEVCRRFGV---- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG ED P+S Y +K +++ + + +G+ + Sbjct: 109 -----RRVVLASSAAVYGDGVAVPVREDAKMAPASVYGLSKLTAETYLSMYTRLFGLEGV 163 Query: 181 LSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG ++ + +RM G + +YGDG RD++Y D A +L L Sbjct: 164 VLRYANVYGERQGDGGEGGVVSIFTSRMARGEALTVYGDGYQTRDFVYAGDVANANWLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +N+G +E D++ L+ T I++ R G R A+D Sbjct: 224 ITPDVNGVFNVGTASETSVNDLI--------QLLTDVAGRTVDIQYCTPRHGDIYRSALD 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 + + ++ W PQ + GL +T W Sbjct: 276 NRLAREKLCWQPQIPLREGLARTWDW 301 >gi|302343570|ref|YP_003808099.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301640183|gb|ADK85505.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 302 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 147/336 (43%), Gaps = 47/336 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK--LTYAGNLNSLKEISQSNLFSFLQVD 58 M +++TGGAGFIG L L N + + +ID L NL L +++++ D Sbjct: 1 MNILITGGAGFIGVNLTAKL-NAIGVSPRIIDNEVLGKEANLAGLS-------YTYIKAD 52 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D A+K D +V+ AA++ V SI N +GTF LLE R Sbjct: 53 IRDANACIDAVKGM--DCVVHLAADTRVIPSIENPRFNFDNNTLGTFNLLEAMR------ 104 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q K R + ST + G + E +P P SPY A+K + + + A+ +YGI Sbjct: 105 -QTKVG--RIVAASTGGAILGERTPPVHEEMLP-KPVSPYGASKLAMEGYLSAFAGSYGI 160 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAI-TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 SN YG + + A R+I G + +YGDG+ +RD++Y++D + Sbjct: 161 AATALRFSNVYGERSIHKGSVVAAFFRRIIAGKSITIYGDGEQIRDYVYIKDLCDGIIKA 220 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGF-------LLDALIPKSYSHTELIRFIEDRPG 289 + G+ G VF++G L AL+ + + + R G Sbjct: 221 VNSGKAG----------------VFQLGTGIPTTLNQLVALMREVTGREIEVLYEPFRDG 264 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R D +K + E+G+ P ++ GL T W+L Sbjct: 265 EIRHTYCDIAKARRELGFDPATPLKDGLTATWNWFL 300 >gi|300854186|ref|YP_003779170.1| putative nucleoside-diphosphate-sugar epimerase [Clostridium ljungdahlii DSM 13528] gi|300434301|gb|ADK14068.1| predicted nucleoside-diphosphate-sugar epimerase [Clostridium ljungdahlii DSM 13528] Length = 336 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 26/338 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIG + + L+ + +V D L+ G + +L+E ++ F F+ D+ Sbjct: 2 MNILITGGAGFIGRWMVKKLLENGN-KVTAFDNLS-NGRIENLQEFKNNSGFKFIGGDVR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D + KE + D + + AA +V SI +++GTF +LE R+ Sbjct: 60 DENKLDEVFKE-KFDIVYHLAASINVQDSIENPRTTFYNDVVGTFNILERARIQMFGRNG 118 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W + + + ST VY + E P P SPY +K +++ +V Sbjct: 119 KMDEEGWVLDPNEDTYPCKVVFTSTCMVYDVSGQEGIDEKHPVKPVSPYGGSKIAAENMV 178 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ I + + +YG G+ RD LY Sbjct: 179 LSYYNAYKLPTVVVRPFNTYGPFQKTGGEGGVVAAFINNSLHSRDINIYGSGEQTRDLLY 238 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V+D R L + ++ + G I+ + +I I K+ ++ I Sbjct: 239 VKDCARFLAMAGYCDKVNGQIVNAGTGRDVTINELAQI-------ITKNRVKVRHVKHIY 291 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + + K + I W P+ +E G+ +T W Sbjct: 292 PQS-EIMKLKCNYKKARDLINWEPEHTLEKGIGETERW 328 >gi|296270598|ref|YP_003653230.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] gi|296093385|gb|ADG89337.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] Length = 329 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 35/333 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC ++ L+ +V+ +D L G+L +++ + F ++ D+ Sbjct: 14 RVVVTGGAGFLGSHLCERIIG-LEAEVICLDNL-LTGSLRNVRHLIGDPAFRLVRCDLTQ 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++FA+ + + E + +GT LE L+ + Sbjct: 72 GADVPGKV-----DLVLHFASAASPADYLRHPIETLEAGSLGTRHALE--------LATE 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF+ ST EVYG + E P P S Y K ++ L A+ + G Sbjct: 119 K--HARFVLASTSEVYGDPLEHPQRETYWGNVNPVGPRSVYDEAKRYAEALTTAYRNARG 176 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 ++ N YGP P + IP I + + G + + GDG R YV+D V + Sbjct: 177 TDTAIARIFNTYGPRMRPHDGRAIPTFIRQALTGEPITVTGDGSQTRSICYVDDTVEGVL 236 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G G NIG E +++ I L + P I F+ RP D Sbjct: 237 ALAASGFPGP-VNIGNPAEMSMLELAETIRDLAGSSSP--------ITFVP-RPTDDPAV 286 Query: 295 AIDSSKIKSE-IGWFPQENMESGLNKTVCWYLD 326 + +E +GW P+ + +GL +T+ W+ + Sbjct: 287 RRPDITLATELLGWRPRVDPRTGLRRTIAWFAE 319 >gi|94987022|ref|YP_594955.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] gi|94731271|emb|CAJ54634.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] Length = 336 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG LCR L+++ V+ ID L Y+ L + L + F+F Sbjct: 1 MNVLVTGAAGFIGFHLCRRLLDEGH-SVVGIDNLNDYYSVTLKKDRLALLMDEPNFTFSS 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI + ++ +++ +VN AA++ V SI +I +N++G +LE Sbjct: 60 IDIVNLPNLQELFLQYRFSHVVNLAAQAGVRYSIENPSSYIQSNLVGFGNILE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C + + F S+ VYG FS N P S Y A+K +++ + A+ H Y Sbjct: 113 CCRHTEVEHLVF--ASSSSVYGLNTLMPFSVHQGTNHPISLYGASKKANELMAHAYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L ++ G + ++ +G+ RD+ Y++D + + Sbjct: 171 NLPSTGLRFFTVYGPWGRPDMALFLFTKAILSGEPISVFNEGRMRRDFTYIDDIIEGVIR 230 Query: 236 VLKKG-RIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V+KK +I E YNIG NN + + + + L K Y Sbjct: 231 VMKKTPKINENWNSHSPDPSSSKAPWKIYNIGNNNTVQLSEFIEVLEVELGKKAIKEY-- 288 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D +K ++ + P +E G+ K V WY Sbjct: 289 ------LPMQPGDVEATWADIDDLKHDVDFSPNTPIEYGIKKFVEWY 329 >gi|315031370|gb|EFT43302.1| NAD-binding domain 4 [Enterococcus faecalis TX0017] Length = 319 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKY------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +K+ RF+ S+ VYG E P SPY+ K +++ VL H +G+P Sbjct: 110 QKELKRFVFASSAAVYGVEPTLPKRETSMICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYGDGQNVRDWLYVEDHVRA 232 N YGP P ++ ++ + S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGPNQNPSSPYSGVLSILMDHYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|327190502|gb|EGE57598.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CNPAF512] Length = 393 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 151/351 (43%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV- 57 MR +TG AGFIG L R L+ + +V D LT Y L ++ + S +F V Sbjct: 56 MRYFITGTAGFIGFHLARRLLQEGH-EVTGFDGLTPYYNVKLKEMRHAALSQFPAFKPVI 114 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + +A+ +PD +++ AA++ V S+ + +I +N+ G+ W+ Sbjct: 115 AMLEDRPALEAAVHAAKPDILIHLAAQAGVRYSLENPEAYIHSNVEGS----------WN 164 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 165 IMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSMELMAHSYAHL 224 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGP+ P+ + M+EG + +YG+G RD+ Y++D V A+ Sbjct: 225 HKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLVEAI- 283 Query: 235 LVLKKGRIGER-------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + L GE NIGG +D V + K+ Sbjct: 284 VRLSAIAPGEENRLDDAAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKTL 335 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G R + + G+ P ++ G+ V WYLD Sbjct: 336 GRPAIRLMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVKAFVDWYLD 386 >gi|229105864|ref|ZP_04236491.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-28] gi|228677585|gb|EEL31835.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-28] Length = 326 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 43/326 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F + D+ D+ Sbjct: 1 MVCGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYKGDLRDKS 53 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +R + DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 54 FLRDVFTQENIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFKV 106 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP----- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 107 DKFIFS--STAATYGEVDVDLITEETVTNPTNTYGETKLAIEKMLHWYSQASNLKYKVFR 164 Query: 179 ---VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVE 227 V + + G H PE LIPL + + + + ++G DG +RD+++VE Sbjct: 165 YFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHVE 224 Query: 228 DHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 225 DLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEVA 276 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 277 PRRAGDPARLVASSQKAKEKLGWDPK 302 >gi|298247870|ref|ZP_06971675.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297550529|gb|EFH84395.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 325 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 51/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAG+IGS + + LV + +V V+D T + L ++ ++ ++ Sbjct: 1 MKFLVTGGAGYIGSVMTKQLV-EAGHEVTVLDNFTKGHHQAVLPQV------KLVEGELL 53 Query: 61 DRECIRSALKE-FQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + ++ K+ F D +++FAA S V S+ + + N++GT LL+ R Sbjct: 54 NAQRLKEVFKDGF--DGVLHFAALSLVGESVTQPERYYRNNVVGTLNLLDAMR------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST VYG+ ++ E P++PY +K + D ++ +G+ Sbjct: 105 --EAGVKRLVFSSTAAVYGAPEETPILETAQPRPTNPYGGSKLAVDQMIGFEAAAHGLAA 162 Query: 180 L------LSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 + ++ S G H PE LIPL + + GS V +YG DG +RD++ Sbjct: 163 VSLRYFNVAGASGELGEVHNPETHLIPL-VLQAAAGSRESVQIYGTDYPTPDGTAIRDYI 221 Query: 225 YVEDHVRALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 +VED RA L L + G E YN+G GF + +I + T + I Sbjct: 222 HVEDLARAHILALTHAQPGKHEIYNLGNGK-----------GFSVREVIETARQVTGKPI 270 Query: 282 RFIE-DRPGHDRRYAIDSS-KIKSEIGWFPQE 311 + IE DR D + SS K + ++GW PQ+ Sbjct: 271 KAIETDRRAGDPPVLVASSEKAQRDLGWKPQK 302 >gi|296445693|ref|ZP_06887647.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] gi|296256796|gb|EFH03869.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] Length = 340 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 47/350 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIG +L+ + +V+ ID + + L+ L+ ++ F FL+ Sbjct: 1 MKVLVTGVAGFIGFHCAAFLL-ERGDEVVGIDNINDYYDTSLKLSRLELLTPYPNFRFLK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D DR I+ + D + + A++ V S+ ++ +N++G +LE R Sbjct: 60 LDFADRAAIKELFATNRFDRVCHLGAQAGVRYSLENPAAYVDSNLVGFGNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ + FS + P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HGEVPHLTYASSSSVYGANTRTPFSVRQSVDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P YGP+ P+ + PL TR +I G + ++ +G + RD+ Y++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPD-MSPLIFTRKIIAGEPIDVFNNGDHARDFTYIDDIVEGVI 229 Query: 235 LVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + K I E YNIG + + +D + E I K+ Sbjct: 230 RTVDK--IAEPDPEWSSDDPDPSSSSAPWRVYNIGNSRPVELLDFIGE--------IEKA 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG R D S +++ +G+ P ++ G+ KTV W+ Sbjct: 280 VGRSAIKVMRPKQPGDVDRTCADVSALEAAVGFQPATPIDVGIGKTVAWF 329 >gi|330002131|ref|ZP_08304211.1| UDP-glucuronate 5'-epimerase [Klebsiella sp. MS 92-3] gi|328537441|gb|EGF63683.1| UDP-glucuronate 5'-epimerase [Klebsiella sp. MS 92-3] Length = 334 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 158/354 (44%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDIYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ + +D I L +AL Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSPVELMDY---ITALEEALGM 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + I +PG + D+ + +G+ PQ +++ G+ V W+ D Sbjct: 282 EAQKNMMPI-----QPGDVLDTSADTQPLYDLVGFKPQTSVKDGVKNFVEWFKD 330 >gi|218248858|ref|YP_002374229.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8801] gi|218169336|gb|ACK68073.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8801] Length = 332 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 162/346 (46%), Gaps = 50/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+++D L+Y G+ +KE+ + L + D DR Sbjct: 7 ILVTGGAGYIGSHAVLALQKS-GYDVIILDNLSY-GHRELVKEVLKVEL---IVGDTNDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+++FAA V S++ + N++GT LLE + K Sbjct: 62 PLLDQLFANREITAVMHFAAYIAVGESVVNPSIYYRNNVVGTLTLLE-------AMLAAK 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 ++F F ST +YG + +E+ P +P SPY+A+K + ++ + H YG + Sbjct: 115 INKFVF--SSTCAIYGMPQEIPMTENHPQDPLSPYAASKFMVEQILEDFDHAYGFKSVAF 172 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ N G H PE LIPLA +T + + + ++G DG VRD+++V Sbjct: 173 RYFNASGADPQGNLGEDHHPETHLIPLALLTALKKRDSLSIFGTDYKTPDGTAVRDYIHV 232 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--- 279 D HV L +L G+ E +N+G N GF + +I + T Sbjct: 233 NDLASAHVLGLEYLLNGGK-SEVFNLGNGN-----------GFSVREVIETAKKITGIDF 280 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 L++ + RPG S K ++ +GW PQ ++E+ ++ W+ Sbjct: 281 LVKESDRRPGDAPILVGSSEKARNILGWQPQYADLETIIDHAWSWH 326 >gi|312199593|ref|YP_004019654.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] gi|311230929|gb|ADP83784.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] Length = 323 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 39/339 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGF+GS L R L+ V+V+D L+ G +++L + + + Sbjct: 1 MKVVVTGGAGFLGSHLTRELLV-AGCDVVVVDDLS-TGAVSNLSGLP----IKLMVGSVT 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + A D+IV+ AA V+RS+L N+ GT +L+ Sbjct: 55 NRALLEEAAAGA--DSIVHLAARPSVERSLLDPMASHDVNVTGTLTVLDVA--------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ + + S+ VYG ED P P SPY+A+K +++ L + ++G+PVL Sbjct: 104 -QRAEAHVIVTSSAAVYGDAGPLPRREDGPVAPRSPYAASKLAAEAYALGFQASFGLPVL 162 Query: 181 LSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ +GP+ H +IP I + G + ++GDG+ RD YVE + A+ Sbjct: 163 VARLFTVFGPFQSVGHAYTAVIPAFIDAALAGRPLTVHGDGRQTRDVGYVEP-IAAMLAD 221 Query: 237 LKKGRIGE--RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 R+ N+ + + +V + +L +P + F R G R Sbjct: 222 ATTRRLAHPRPVNLAFGARVELLTLVAALEDILGYQLP--------VAFGPGRAGDVRDQ 273 Query: 295 AIDSSKIKSEIGWFPQE---NMESGLNKTVCWYLDNNWW 330 D + ++ FPQ ++ + L+ TV WY + Sbjct: 274 QADPTTART---LFPQAAPGDLATALDATVAWYAARGGY 309 >gi|228942405|ref|ZP_04104943.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975338|ref|ZP_04135894.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981974|ref|ZP_04142268.1| UDP-glucose 4-epimerase [Bacillus thuringiensis Bt407] gi|228777735|gb|EEM26008.1| UDP-glucose 4-epimerase [Bacillus thuringiensis Bt407] gi|228784320|gb|EEM32343.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817246|gb|EEM63333.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943057|gb|AEA18953.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 330 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +AI++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFKQENIEAIMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +D V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 KDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|171320940|ref|ZP_02909934.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5] gi|171093805|gb|EDT38942.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5] Length = 349 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 9 RVLVTGGAGFLGSHLCERLVTSGH-DVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 107 GLAKRVKARILQASTSEVYG--DPDVHPQDERYCGRVNPIGVRACYDEGKRCAETLFMDY 164 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG+ R + YV+D Sbjct: 165 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGEPLTVYGDGRQTRSFCYVDDM 224 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G N+G ++E IDI E+ ++ A +P E D P Sbjct: 225 VDALIRLMNEPGDACAPVNLGSDDEIAMIDIAREVVRIVGATVP-----IEFRPLPSDDP 279 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RR +D + + +GW + +GL T +++ Sbjct: 280 -RQRRPDLDVAHRR--LGWRATTPLATGLAHTARYFI 313 >gi|300723405|ref|YP_003712708.1| putative epimerase [Xenorhabdus nematophila ATCC 19061] gi|39939249|gb|AAR32706.1| putative epimerase [Xenorhabdus nematophila] gi|297629925|emb|CBJ90545.1| putative epimerase [Xenorhabdus nematophila ATCC 19061] Length = 338 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/360 (26%), Positives = 157/360 (43%), Gaps = 49/360 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+ +VTG AGFIG + + L+N + +V+ ID L LN L + +N F Sbjct: 1 MKFLVTGSAGFIGFHVSQRLLN-MGYEVVGIDNLNDYYDVKLKQARLNLL--LPHAN-FR 56 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++D+ DR + Q +++ A++ V SI +I NIIG +LE R Sbjct: 57 FEKLDLADRVATPELFAKHQFQRVIHLGAQAGVRYSIQNPMAYIDANIIGHINILEGCR- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 L S+ VYG K FS D +P S Y+ATK + + + ++ Sbjct: 116 --------HHHVEHLLYASSSSVYGLNKKQPFSTADSVDHPISLYAATKKADELMSHSYS 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP+ P+ + M EG + +Y G VRD+ Y++D V + Sbjct: 168 HLYQLPTTGLRFFTVYGPWGRPDMALFKFTKAMSEGESIDVYNHGNMVRDFTYIDDIVES 227 Query: 233 LYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + + ++ G+I YNIG K +G ++A I S Sbjct: 228 IIRLQNIIPIRNENWSVEDGQIFASSAPYCIYNIGNGQPTK-------LGAFIEA-IEVS 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 F+E + G DSS + +IG+ P ++ G+ + V WYLD ++ +P+ Sbjct: 280 LGVEAKKNFMEIQDGDVLSTCADSSALYDKIGFSPNTPVKEGVKRFVDWYLD--FYQKPV 337 >gi|239908669|ref|YP_002955411.1| putative dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] gi|239798536|dbj|BAH77525.1| putative dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] Length = 333 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 29/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L L+ D++ V + G L+ + ++ L D Sbjct: 4 KVMVTGADGFIGSHLAEALLQAGCDVRAMVQ-YNSFNSWGWLDCSPGATSGDM-EILAGD 61 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +R A+ + + + AA + S + + +I TNI G+ +++ R Sbjct: 62 VRDSGFVRRAVAGCE--VVFHLAALISIPFSYVAPESYIDTNIRGSLNVVQACR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST EVYG+ +E P P SPYSA+K +D +VL++ H + P Sbjct: 114 ---DLGVSRLVHTSTSEVYGTALFTPITEAHPLQPQSPYSASKIGADQIVLSYHHAFETP 170 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP I ++ G G RD+ YV D VR + + Sbjct: 171 VAVMRPFNTYGPRQSARAVIPTIIGQLAAGQRRIRLGALTPTRDFNYVADTVRGFMAMAE 230 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYA 295 + G+ N G N E DI IG ++ + L RP R Sbjct: 231 SPHVLGKTVNFGSNFEISIADIAALIGEVMGVEFEIACDAERL------RPAGSEVDRLW 284 Query: 296 IDSSKIKSEIGWFP----QENMESGLNKTVCWY 324 D S + GW P ++ + GL T W+ Sbjct: 285 CDHSLARELTGWTPDFAGRDGLRRGLALTAQWF 317 >gi|254424664|ref|ZP_05038382.1| GDP-mannose 4,6-dehydratase [Synechococcus sp. PCC 7335] gi|196192153|gb|EDX87117.1| GDP-mannose 4,6-dehydratase [Synechococcus sp. PCC 7335] Length = 356 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 148/331 (44%), Gaps = 37/331 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L++ +V I + T N + + I + + FL Sbjct: 6 RALITGITGQDGSYLAELLLSK-GYEVHGIIRRTSTFNTDRIDHIYEDPHKEDAKLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L++ QP+ + N A+SHV S + + T +G LLE R + Sbjct: 65 GDLNDGTMLRRILEQVQPNEVYNLGAQSHVRVSFDSPEYTVDTVAMGALRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + + RF Q + E+YG + SE+ P+ P SPYS K + + + + +Y Sbjct: 123 --QQRTRSEVRFYQAGSSEMYGKVQHVPQSEETPFYPRSPYSCAKVYAHWQTINYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R++ G LY G+ RDW Y +D+V+A Sbjct: 181 MFATNGILFNHESPRRGETFVTRKITRAIARIVTGQQKKLYLGNLDAKRDWGYAKDYVKA 240 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 ++L+L+ + GE Y+I R+ +DI F+ L T+ + F E Sbjct: 241 MWLMLQHDQPDDFVIATGETYSI-----RQFLDIAFQHVNL---------DWTDFVAFDE 286 Query: 286 D--RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D SK K +GW P+ + E Sbjct: 287 RYLRPAEVDLLIGDPSKAKRILGWQPEVSFE 317 >gi|258593516|emb|CBE69857.1| putative sugar-nucleotide epimerase/dehydratase [NC10 bacterium 'Dutch sediment'] Length = 322 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 33/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TGGAGF+GS LC L+ + QV+ +D L G ++++ + + F F+++D+ + Sbjct: 3 RTLITGGAGFLGSHLCDRLIKEGH-QVICLDNLI-TGMVDNVAHLIGHDAFRFIKLDVTE 60 Query: 62 RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I L D +++FA+ S +D L + + +GT L Sbjct: 61 YLYIDGPL-----DYVLHFASPASPIDYQRL-PIQTLKVGSLGTH----------KALGL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST EVYG E+ P P Y K ++ + +A+ + Sbjct: 105 AKAKGARFLLASTSEVYGDPTIHPQREEYWGNVNPVGPRGVYDEAKRFAEAMTMAYHRYH 164 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ ++ N YGP P +++ I + + G V +YGDG R + YV D V L Sbjct: 165 GLDTRIARIFNTYGPRMRPNDGRVVSNFINQALRGEPVTVYGDGSQTRSFCYVSDLVEGL 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---GH 290 Y +L G + NIG E +D+ +L A+ S T IE RP Sbjct: 225 YRLLMSGEVNP-VNIGNPKEFTVLDLAH---MVLKAVGGPSTDSTGPTTGIELRPLPVDD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + + GW P+ + GL T+ ++ Sbjct: 281 PRVRQPDIGLAQEKFGWEPKVQIAEGLALTIEYF 314 >gi|308175611|ref|YP_003922316.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens DSM 7] gi|307608475|emb|CBI44846.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens DSM 7] gi|328555591|gb|AEB26083.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens TA208] gi|328913965|gb|AEB65561.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens LL3] Length = 338 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 62/361 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + L +K+I+ L F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIVVLDNLSNSSPEALERVKDITGKGLV-FYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ ++ E + +A+++FA V S+ + N+ GTFIL E + + Sbjct: 59 LLDRDAVQRVFAENEIEAVIHFAGLKAVGESVAVPLRYYHNNLTGTFILCEVMQAYGI-- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL----------- 167 KK F S+ VYG + +ED P + ++PY TK + + Sbjct: 117 ---KKIVFS----SSATVYGVPETTPITEDFPLSATNPYGQTKLMLEQILRDLHKADPEW 169 Query: 168 ---VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------ 215 +L + + +G ++ S G P P L+P +A + + + ++G Sbjct: 170 SIALLRYFNPFG-----AHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLQVFGNDYPTK 224 Query: 216 DGQNVRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V E HVRAL VL + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLAEGHVRALEKVLDTTG-ADAYNLGTGRGYSVLEMVKAFEKVSGKAV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 P RF RPG D +K K+E+GW + +E +C ++W W Sbjct: 284 P--------YRFAARRPGDIAACFADPAKAKAELGWEAKRGLEE-----MCA---DSWKW 327 Query: 332 R 332 + Sbjct: 328 Q 328 >gi|313124421|ref|YP_004034680.1| udp-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280984|gb|ADQ61703.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 329 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 159/347 (45%), Gaps = 50/347 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV D V+V+D L + G+ ++ + ++ F QVD+ Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGN-DVVVLDSL-FTGHKEAIDQKAK-----FYQVDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL---EETRLWWSC 117 D++ + LK+ + +A+++FAA S V S+ ++ N+ G LL EET + + Sbjct: 54 DKDAVADVLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLV 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S S+ YG +K +E+ P NP +PY TK + ++ GI Sbjct: 114 FS------------SSAATYGIPEKLPITEETPLNPINPYGETKMMMEKIMYWADKANGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVR 221 V ++ + G H PE LIP + + G F ++G DG NVR Sbjct: 162 KSIALRYFNVAGASLDGSIGEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVR 221 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++V D + A L LK + + +N+G N++I+ + IP + Sbjct: 222 DYVHVVDLIDAHVLALKHLMETNQSDVFNLGTATGFSNLEILKAAIKVTGVDIPYTIG-- 279 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ------PRRGGDPDSLVADSSKARKVLGWSPKYENVDDIIASAWNWH 320 >gi|150399165|ref|YP_001322932.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] gi|150011868|gb|ABR54320.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] Length = 319 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 26/337 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIG + ++ + +IQ++ ID L ++ LKE L F F Sbjct: 1 MKILVTGAAGFIGFSFSENILKNTEIQIIGIDNLNPYYDV-KLKEKRLDILKGFKNFKFF 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI + E + +PD IV+ AA++ V S+ + +N +GT + E + + Sbjct: 60 DEDIINYEELDEIFNLEKPDLIVHLAAQAGVRYSLENPHVYEYSNNLGTLNIFELAKKYG 119 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 R + S+ VYG +K F E D P S Y+ATK ++ + + H Sbjct: 120 IK---------RVIFASSSSVYGGNEKTPFLESDNVDKPVSLYAATKKYNELIAHVYNHL 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 YGI ++ YG + P+ ++E + +Y G+ RD+ Y+ D V + Sbjct: 171 YGIEMIGLRFFTVYGEFGRPDMAYWKFTKNILEEKPIDVYNYGKMKRDFTYISDIVEGIK 230 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + L K E +N+GG+N E+ +++ +LI K + ++ + G Sbjct: 231 SAVFLSKKIDYEIFNLGGDNP-------IELEYMI-SLIEKETGKKAIKNYLPVQEGDVL 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 D +K K + ++P +E G+ + V WY+ N + Sbjct: 283 ITMADLTKSKENLKYYPNICIEEGIKRFVKWYIQNRY 319 >gi|24212935|ref|NP_710416.1| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] gi|45656108|ref|YP_000194.1| oxidoreductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193606|gb|AAN47434.1| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] gi|45599341|gb|AAS68831.1| oxidoreductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 321 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 28/319 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TG GF+GS YL+ +LK + N +++ + + DI Sbjct: 1 MKCLITGAGGFVGS----YLLKELKRSYTDFLGIGIQSGPNITEDLELPKSYRSVVCDIR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + S + EF PD I + AA+ V +++ E + NI GT LLE R Sbjct: 57 NLNQVCSIIHEFSPDVIFHLAAQPFVPKAVEDPGETLEINIHGTLNLLESLR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLF--SEDMPYNPSSPYSATKASSDYLVLAWGH-TYGI 177 K + RF+ IS+ +VYG++ + +E + P +PYS++K ++ L + + Sbjct: 109 SLKKKVRFVYISSSDVYGNVPESYLPVTESVVPAPLNPYSSSKYCAEIYCLQYHRWIQDL 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIP------LAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 ++++ N+ GP +IP L + E L GD + RD+L V D V Sbjct: 169 EIVIARPFNHTGPKQGLNFVIPNFCSQVLKALKRPESERKILVGDLSSSRDFLDVRDVVC 228 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A ++ ++G+ GE YNI E D++ I IP T RF RP Sbjct: 229 AYRILAERGKPGEIYNICSGKEVIIRDVLDGIISTSGQKIPVEVDST---RF---RPAEM 282 Query: 292 RRYAIDSSKIKSEIGWFPQ 310 RR D+ K++ ++GW P+ Sbjct: 283 RRLFGDNQKLR-QLGWEPR 300 >gi|91204592|emb|CAJ70820.1| similar to UDP-glucose 4-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 310 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 28/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFI S L L+ V+++D NL++ +E + + F ++DIC Sbjct: 1 MKILVTGGAGFIASHLVDNLIAKGH-DVVIVD------NLSTGREENINPKVRFYKMDIC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +PD + + AA + V +S+ NI+G+ L C Sbjct: 54 NVAALADIFDKERPDVVNHHAAHADVRKSVEMPAYDANINILGSLNL---------CQLS 104 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K +F+ ST VYG + +E+ P P S Y +K + ++ + + Y + Sbjct: 105 MKYQVKKFIYASTGGAVYGEPKRMPVTEESPIEPLSQYGVSKHTVEHYLSVFNKLYHMDF 164 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P ++ + ++ ++GDG RD+++V D + A Sbjct: 165 TILRYPNVYGPRQSPYGEAGVVAIFSEHILNNKRPTIFGDGSKTRDYVFVADIIEANLKA 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+K GE +N+G E ++ VF+ + DAL S E I F R G R + Sbjct: 225 LEKEGNGEIFNLGWGLEIPDL-AVFQA--IRDAL----NSKIEPI-FGNKRNGEIERICL 276 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 DS+K + W P+ N + G+ + +Y Sbjct: 277 DSTKAIKMLHWMPKINFKEGIKLSTNYY 304 >gi|289522642|ref|ZP_06439496.1| UDP-glucuronate 5'-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504478|gb|EFD25642.1| UDP-glucuronate 5'-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 343 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 163/347 (46%), Gaps = 43/347 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 ++++TG AGFIG L ++++ + + V+ +D L Y L + L + F F + Sbjct: 10 KILITGAAGFIGFHLAKFML-ERRYFVVGLDNLNNYYDPKLKEDRLDILRAYGNFVFYRA 68 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ + + +P+ +VN AA++ V S+ ++ +N++G +LE +C Sbjct: 69 DLKKKPVVDKVFAACRPEYVVNLAAQAGVRYSLENPYAYVDSNLVGFVNVLE------AC 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S K L S+ VYG FS E +P S Y+ATK +++ + + H YG Sbjct: 123 RSYPVK---HLLFASSSSVYGGNKTVPFSTEHNTDHPVSLYAATKKANELMAHTYAHLYG 179 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + + TR ++ G + ++ G+ RD+ Y++D V+ALY Sbjct: 180 IPSTGVRLFTVYGPWGRPD-MAYFSFTRDILAGVPIKVFNHGRMSRDFTYIDDVVKALYR 238 Query: 236 VL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ + G I E YN+G N+ +++ I L + L K+ Sbjct: 239 LIDLTPKANYDWNERGGPISESFAPYKIYNLGNNSP---VELSRFIAVLENCLGKKAQK- 294 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +++ +PG D + ++ IG+ P+ +E GL K V WY Sbjct: 295 ----VYLDMQPGDVIMTYADVADLEKAIGFKPETPIEEGLAKFVEWY 337 >gi|240172955|ref|ZP_04751613.1| UDP-glucose 4-epimerase [Mycobacterium kansasii ATCC 12478] Length = 311 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 26/329 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTG AGFIGS L L+ D V+ +D G +L+ +++ +F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHT-VIGLDNFA-TGRATNLEHLAEHPAHTFVEADIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +++ L + +P+ + + AA+ V S+ N+IGT L E R Sbjct: 59 TAD-LQAILDQHRPEVVFHLAAQIDVRHSVADPQFDAEVNVIGTVRLAEAAR-------- 109 Query: 121 DKKDQFRFL--QISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + R + S +YG ED P +P+SPY+A K + + + + H YG+ Sbjct: 110 --RTRVRKVVHTSSGGSIYGVPPVYPTGEDAPTDPASPYAAGKVAGEIYLNTFRHLYGLD 167 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +N YGP P ++ + ++ G ++GDG RD++YV+D V A Sbjct: 168 CSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGGKTRDYVYVDDVVDAFVK 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G+R+N+G E + L + + + + F DR G +R Sbjct: 228 ASGEAGGGQRFNVGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPDRLGDLQRSC 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D + +GW P+ + G+ +TV ++ Sbjct: 280 LDIGLAERVLGWRPRVELAEGVRRTVEYF 308 >gi|301165716|emb|CBW25288.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteriovorax marinus SJ] Length = 316 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 34/327 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +V GG+GFIG+ L+ D QV VI + I N + +I D Sbjct: 13 RTLVIGGSGFIGTHTVNSLL-DQDHQVGVISR-----------SIGIHNNVEYYCGNILD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEF---ITTNIIGTFILLEETRLWWSCL 118 + + ++ +F P+ +++ A +RSI D+F I TN+ GT + + CL Sbjct: 61 EDFLSQSISDFDPNFVIHLAGSK--NRSI-QIDDFKSDINTNLNGTLNI-------FGCL 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + + + + E YG + F E M P S YS +K + YL + YG+P Sbjct: 111 ISLKSLE-QVIVVGSTEEYGDAESVPFVESMNETPISSYSFSKTCTKYLAETFARVYGLP 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V S YGP P+ I T +++G F G+ RD++Y++D V ++ Sbjct: 170 VAYVRPSIAYGPRQNPDMFISSLCTTLLKGER-FQMSSGEQRRDFIYIDDLVELFMAIIN 228 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +N GG + + I I D L +S I I+ R + +D Sbjct: 229 FNSPVTGTFNAGGGSSVQIKKIAMMIA---DKLSSESLID---IGHIKTRALESDEHLLD 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 +SK S + W P ++E G++KTV ++ Sbjct: 283 NSKASSLLNWNPTTSLEEGISKTVEFF 309 >gi|322418284|ref|YP_004197507.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] gi|320124671|gb|ADW12231.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] Length = 337 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 165/354 (46%), Gaps = 57/354 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 +++VTG AGFIG L + L+ ++V+ +D L Y NL LK++ F F ++ Sbjct: 3 KMLVTGAAGFIGFHLSKRLLA-AGVEVVGLDNLNDYYDVNLKYGRLKQLEGEPGFRFEKM 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ DRE +++ K + D ++N AA++ V S++ ++ +N+ G +LE C Sbjct: 62 ELSDREGMQALFKRERFDVVINLAAQAGVRYSLINPYAYVDSNLSGFMNILE------GC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLA 170 K + S+ VYG+ + MP+ +P S Y+ATK +++ + Sbjct: 116 RHHGVK---HLVYASSSSVYGA------NTSMPFSVHHNVDHPVSLYAATKKANELMAHT 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + YGIP YGP+ P+ + L ++EG + ++ G+ RD+ Y++D V Sbjct: 167 YSSLYGIPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNYGKMQRDFTYIDDIV 226 Query: 231 RALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDAL 270 + V+ R+ E+ YNIG NN ++++ I L AL Sbjct: 227 EGVCRVID--RVPEKDPAWSGADPDPGTSYAPYKIYNIGNNNP---VELLRFIEVLEQAL 281 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + I+ D P YA D + ++G+ P ++E G+ + V WY Sbjct: 282 GKEAQKNLLPIQ-AGDVPA---TYA-DVDDLMRDVGFRPATSIEDGVGRFVAWY 330 >gi|254500100|ref|ZP_05112252.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] gi|222441398|gb|EEE48076.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] Length = 337 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 39/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R +TG AGFIG L L+ + +V D L+ Y L + + Q FS Sbjct: 6 RAFITGSAGFIGFHLAELLLQE-GWEVAGFDGLSDYYDVRLKERRHEILHQHGTFSSTIA 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + ++ +F+PD IV+ AA++ V S+ ++ N++GT ++E R Sbjct: 65 QLEDTTSVSKSIADFKPDVIVHLAAQAGVRYSLENPRAYVDANVVGTLNVMEAAR----- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L ST VYG+ + F E+ + P + Y+ATK +++ + AW H + Sbjct: 120 ----AANVQHLLMASTSSVYGANTEMPFDENQKTDTPLTIYAATKKANEAMGHAWAHIHQ 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP+ + YGP+ P+ + ++EG+ + +Y G+ RD+ YV D VR + + Sbjct: 176 IPITMFRFFTVYGPWGRPDMALFKFTKGILEGTPIDIYNHGEMYRDFTYVADLVRGIRGL 235 Query: 237 L-----KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + +G E NIG +++ + +D + I D L K+ + Sbjct: 236 MDAVPGSEGAAPETDNLSPVAPYRVVNIGNSDKVRLLDFIEAIE---DELGKKA-----I 287 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + G D++ ++ G+ P+ G+ K V WY D Sbjct: 288 RNLMPMQTGDVPATWADATLLQDLTGYKPETPFREGVAKFVQWYRD 333 >gi|289207803|ref|YP_003459869.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix] gi|288943434|gb|ADC71133.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. K90mix] Length = 341 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 43/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY------AGNLNSLKEISQS-NLFS 53 M++++TG AGFIGS L L+ + V D Y L+ ++ + S F Sbjct: 1 MKVLITGAAGFIGSHLALRLLERGDTVIGVDDMNDYYDPSLKRARLDRIRALPASRQRFV 60 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F DI DR + +E +P+ +VN AA++ V S+ ++ TN++G +LE R Sbjct: 61 FEHEDIADRAEMERVFREHRPERVVNLAAQAGVRYSLENPAAYVDTNLVGFGNILEGCRH 120 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 + + S+ VYG+ FS D +P S Y+A+K +++ + + Sbjct: 121 FGVE---------HLVYASSSSVYGANTTMPFSVHDNVDHPLSLYAASKKANELMAHTYA 171 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +PV YGP+ P+ + L +++ G + ++ G + RD+ Y++D V Sbjct: 172 HLYQLPVTGLRFFTVYGPWGRPDMALFLFTKKILAGEPIDVFNYGHHRRDFTYIDDIVEG 231 Query: 233 LYLVLKK------------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + L + YNIG + + ++++ I L D L K+ Sbjct: 232 VIRTLDRPAQPNLDWTGAEPDSATSAAPYRLYNIGAH---RPVELMHYIEVLEDCLGCKA 288 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + +PG D ++++ G+ P ++E G+ + V WYL Sbjct: 289 EKN-----LLPLQPGDVPDTYADVEALRTDTGYEPTTSVEEGVARFVDWYL 334 >gi|317484511|ref|ZP_07943420.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] gi|316924229|gb|EFV45406.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] Length = 335 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 45/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L + L+ + V+ ID L Y+ L + L ++ F+F Sbjct: 1 MHVLVTGAAGFIGFHLSKRLIAEGH-TVVGIDNLNDYYSVQLKKDRLAQLQALPGFTFEH 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + + +VN AA++ V S++ ++ +N++G LLE Sbjct: 60 TDLADDAALEAVFVRNAFSHVVNLAAQAGVRYSLINPKSYVQSNLVGFGNLLE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + F S+ VYG FS D +P S Y+A+K +++ + + H Y Sbjct: 113 CCRHGKVEHLVF--ASSSSVYGMNTSMPFSVHDNVDHPVSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L ++ G + ++ +G+ RD+ Y++D + + Sbjct: 171 RLPATGLRFFTVYGPWGRPDMALYLFTKAILAGEPIKVFNEGKMRRDFTYIDDIIEGVMR 230 Query: 236 VLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 V+ RI + YNIG NN +++ I L DAL K+ Sbjct: 231 VM--ARIPQPDPAWDSAKPNPSTSTAPWRIYNIGNNN---TVELGTFISTLEDALGKKA- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S + ++ G+ PQ ++E G+ + V WY Sbjct: 285 ----IRNLMPMQPGDVEATWADVSDLIADTGFRPQTSVEYGVGQFVKWY 329 >gi|126696749|ref|YP_001091635.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9301] gi|126543792|gb|ABO18034.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9301] Length = 335 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 23/333 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV ++ + + G L+ + ++N+ +++ DI Sbjct: 6 KVLVTGADGFIGSHLTEMLVRKGYEVNAFCLYNSFGLKGWLDFVAPEIKNNI-NYIFGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + I A+K + + + AA + S ++ TNI GT +LE R Sbjct: 65 RNYDSISKAVK--SNNFVFHLAALIGIPYSYTSPSSYVDTNIKGTLNVLEACR------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D + + ST E YGS +E+ P SPY+ATK ++D L L++ ++ PV Sbjct: 116 --KFDIEKLIHTSTSETYGSAQYVPINEEHPLVAQSPYAATKIAADQLALSFFKSFNTPV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-YLVLK 238 + N YGP +IP I +++E G RD+ YV D A + + Sbjct: 174 SILRPFNTYGPRQSCRAVIPSIILQILEKKEFISLGSLMPTRDFNYVSDTCEAFEKICIS 233 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G+ N E D V EI ++++ I ++ R D+ +R + DS Sbjct: 234 NKTTGQILNAASEYEISIADTVKEISKIMNSKIS---IISDQKRLRPDKSEVNRLFG-DS 289 Query: 299 SKIKSEIGWFPQ----ENMESGLNKTVCWYLDN 327 S+++ W P+ + G+ KT+ W+++N Sbjct: 290 SRLQELSNWKPKYKGLDGFREGIKKTIDWFINN 322 >gi|119953233|ref|YP_945442.1| UDP-glucuronate 4-epimerase [Borrelia turicatae 91E135] gi|119862004|gb|AAX17772.1| UDP-glucuronate 4-epimerase [Borrelia turicatae 91E135] Length = 352 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 28/259 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--------------SLK 44 MR+ +TG AGFIG + + L ++ +VL +D L Y NL K Sbjct: 1 MRVFLTGIAGFIGFHVAKRLADNGH-EVLGVDVLNDYYEPNLKYERLEVLGFDRKNIGSK 59 Query: 45 EISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 ++ QSN + SF+ +DI D++ + S +++ + + AA++ + SI D +I+ NI Sbjct: 60 KVIQSNKYNNLSFIYLDILDKDKVLSLFSDYKFTHVCHLAAQAGIRDSIENPDSYISVNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G F +L+ R+ S + F+ ST VYG K ED + +P + Y+A+ Sbjct: 120 VGFFNVLDACRIHKSHIEH-------FVYASTSAVYGINKKMPSDEDSITDHPLNLYAAS 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ ++ IP YGPY P+ + L +I+ + + ++ +G Sbjct: 173 KKSNEVIAHAYSSSFNIPTTGLRFFTVYGPYGRPDMALYLFADGIIKQTPINVFNNGDMA 232 Query: 221 RDWLYVEDHVRALYLVLKK 239 RD+ YV+D +Y VLKK Sbjct: 233 RDFTYVDDVADGVYSVLKK 251 >gi|328542365|ref|YP_004302474.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR [polymorphum gilvum SL003B-26A1] gi|326412112|gb|ADZ69175.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR [Polymorphum gilvum SL003B-26A1] Length = 336 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 43/348 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIGS + + L++D +V+ ID + Y L L + SN F QV Sbjct: 4 VLVTGSAGFIGSHVAQRLLDD-GWRVVGIDNVNAYYDPALKEARLARLRASNHFHEEQVS 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + + P+ I++ AA++ V S+ +++ NI G +LE R Sbjct: 63 VEDREAVTAVFRRHAPERIIHLAAQAGVRHSLDAPQDYVDANITGFLNILEAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 D F ST V+G LDK + S N P S Y+ATK +++ + A+ H + Sbjct: 117 -AHPVDHLVF--ASTSSVFG-LDKAMPLSPHRGGNHPVSFYAATKKANEMMAHAYAHLFA 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + ++ G V LY +G+ VRD+ Y++D V + + Sbjct: 173 IPCTGLRFFTVYGPWGRPDMALFKFTKAILAGEPVPLYNEGRMVRDFTYIDDIVEGVVRI 232 Query: 237 LKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + ER YNIG + E+ L+A I + T Sbjct: 233 ADRPAAPDPAWEAERPDPASSAAPYRIYNIGNSQP-------VELLTYLEA-IEAATGRT 284 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + + G+ P + G+ V WY D Sbjct: 285 ARRELLPMQPGDVSATWADVEDLVAATGFRPSTPVADGVRAFVDWYRD 332 >gi|219851020|ref|YP_002465452.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] gi|219545279|gb|ACL15729.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] Length = 369 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 33/334 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG IG L R L N ++L++D L+ + N + + F++ DI D Sbjct: 13 ILVTGGAGAIGGNLVRRLNNLGAKKILILDSLSSSYEWN----MEAGDRIQFIKGDILDE 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +R K+ +PD + + AA S+ + + N IG +L+ ++ Sbjct: 69 EKLRWTFKQ-KPDIVYHLAAHFANQNSVDNPETDLMVNGIGILKVLQYAQM--------- 118 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VYG K F E D+ + +PY TK + + + Y +P++ Sbjct: 119 VGVERFVYSSSGCGVYGLESKMPFKEDDVSIHLHTPYQVTKLLGELYTNYFHNMYDLPIV 178 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + N+YGP P + +IP ++G + + G+G RDW YV D V L L+ Sbjct: 179 NARFFNSYGPGEVPGRYRNVIPNFFYWAMKGLPLPITGEGTETRDWTYVGDIVNGLLLMA 238 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY-- 294 + IGE +N+G E++ ID+ + L + I F R + Sbjct: 239 YRDEAIGEAFNLGNGEEQRVIDMANTVNALT--------GNEAGITFTPRRDWDVKTRLL 290 Query: 295 -AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ID S++ +G+ PQ GL T W+++N Sbjct: 291 SCIDKSRVV--LGYEPQTTFSKGLENTYEWFVEN 322 >gi|126649888|ref|ZP_01722124.1| Nucleoside-diphosphate-sugar epimerase and GAF domain fusion protein [Bacillus sp. B14905] gi|126593607|gb|EAZ87552.1| Nucleoside-diphosphate-sugar epimerase and GAF domain fusion protein [Bacillus sp. B14905] Length = 308 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 30/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG GFIGSA+ R + V +ID L+ G+L ++ +S L + ++ ++C Sbjct: 1 MNVLVTGGYGFIGSAVGRRFFEE-GASVYIIDNLS-TGHLRNVDFEHKSYLLN-VEDEVC 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + KE D +++ AA++ V +S+ + I TNI+G +L LS Sbjct: 58 EH-----LFKETHFDVVIHCAAQTSVQQSLQEPVKDILTNIVGLSQML--------FLSS 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + F+ S+ VYG+ E P S Y K+ + W Y +P+L Sbjct: 105 KYKVK-HFVFASSAAVYGNSHYPPLEETDVCEPISMYGLNKSIGETYCEKWQKDYRLPIL 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N +GP + +IP + +EG +YGDG+ RD++YV+D A+Y + Sbjct: 164 IYRFANVFGPRQQMQGEAAVIPSMLKSSMEGKPFTIYGDGEQTRDFIYVDDIADAIYAGV 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 R+ YN+ N ++ L+ + +H I++ R G ++ Sbjct: 224 -HARLQGIYNVSTNEAWSLHQVI---------LLLQHLNHPLEIQYAPAREGDIEHSFLN 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 + K+ + IGW P+ + G+ +T+ Sbjct: 274 NDKLANAIGWRPKISFAEGIERTL 297 >gi|258647381|ref|ZP_05734850.1| GDP-mannose 4,6-dehydratase [Prevotella tannerae ATCC 51259] gi|260852745|gb|EEX72614.1| GDP-mannose 4,6-dehydratase [Prevotella tannerae ATCC 51259] Length = 378 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 155/347 (44%), Gaps = 58/347 (16%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS L +L+ N +I+ L +D+ ++++ Sbjct: 17 LITGITGQDGSFLAEFLISKGYEVHGVLRRSSSFNTGRIEHLYLDEW--------VRDMK 68 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 +S L + D+ D I L+ QPD I N AA+SHV S ++ T+ +G L Sbjct: 69 KSRLINLHWGDMTDSSSILRILQTIQPDEIYNLAAQSHVKVSFDVSEYTAETDAVGVLRL 128 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK R Q ST E+YG + + E P+ P SPY K ++ Sbjct: 129 LEAIRI----LGMEKKT--RLYQASTSELYGKVQEVPQRETTPFYPRSPYGVAKQYGFWI 182 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 V + +YG+ +L ++ S G F + I LA+ R+ +G LY G+ RD Sbjct: 183 VKNYRESYGMYAVNGILFNHESERRGE-TFVTRKITLAVARIKQGLQDKLYLGNMNARRD 241 Query: 223 WLYVEDHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----AL 270 W Y +D+V ++L+L+ + GE + + R+ + + F E+G +D + Sbjct: 242 WGYAKDYVECMWLMLQHKQPEDFVIATGEYHTV-----REFVTLAFVEVGITIDWQGEGI 296 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQEN 312 K IE P + R + D +K ++E+GW PQ+ Sbjct: 297 EEKGIERGTGRVLIEVDPKYFRPAEVEELLGDPTKARTELGWNPQKT 343 >gi|229118752|ref|ZP_04248103.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-3] gi|228664720|gb|EEL20211.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-3] Length = 326 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 43/326 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 1 MVCGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDKS 53 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +R + DA+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 54 FLRDVFTQENIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFKV 106 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP----- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 107 DKFIFS--STAATYGEVDVDLITEETVTNPTNTYGETKLAIEKMLHWYSQASNLKYKVFR 164 Query: 179 ---VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVE 227 V + + G H PE LIPL + + + + ++G DG +RD+++VE Sbjct: 165 YFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHVE 224 Query: 228 DHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 225 DLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEVA 276 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 277 PRRAGDPARLVASSQKAKEKLGWDPK 302 >gi|290475437|ref|YP_003468325.1| putative epimerase [Xenorhabdus bovienii SS-2004] gi|289174758|emb|CBJ81559.1| putative epimerase [Xenorhabdus bovienii SS-2004] Length = 338 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 95/351 (27%), Positives = 159/351 (45%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL------FSF 54 M+ +VTG AGFIG + + L++ + +V+ ID + ++N LK+ S+ NL F F Sbjct: 1 MKFLVTGSAGFIGFHVSQRLLS-MGHEVVGIDNINDYYDVN-LKQ-SRLNLLLPHTNFQF 57 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++D+ DR I + Q +++ A+ V SI +I NI+G +LE R Sbjct: 58 EKLDLADRIAISELFVKHQFQRVIHLGAQPGVRYSIQNPMAYIDANIVGHINILEGCR-- 115 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ + L S+ VYG K FS D +P S Y+ATK + + + ++ H Sbjct: 116 -----HNRVEHL--LYASSSSVYGLNKKQPFSTNDSVDHPVSLYAATKKADELMSHSYSH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + M+EG + +Y G VRD+ Y++D V ++ Sbjct: 169 LYQLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGRSIDVYNHGNMVRDFTYIDDIVESI 228 Query: 234 YL------------VLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +++ G I YNIG K +G ++A I S Sbjct: 229 IRLQDIIPIPNKDWLVEDGEISSSSAPYRIYNIGNGQPTK-------LGDFIEA-IEASL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+E + G DS+ + +IG+ P ++ G+ + V WYLD Sbjct: 281 GINAKKNFMEIQDGDVLSTCADSNTLYDKIGFSPDTPVKEGVKRFVDWYLD 331 >gi|301060720|ref|ZP_07201535.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] gi|300445117|gb|EFK09067.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] Length = 326 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 147/328 (44%), Gaps = 23/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++VTG AGFIG L L+ DL V+ +D L Y L L+ + F F++ Sbjct: 7 KVLVTGSAGFIGFHLSSKLL-DLGYHVVGLDNLNPYYDVTLKKARLELLKPHGRFRFVKG 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E +R +E + I N AA++ V S+ + +NI G LLE R Sbjct: 66 DIQDLEALRELFREQKITHICNLAAQAGVRHSLKDPFSYQKSNIEGFLNLLEMAR----- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + F+ S+ VYG K +S ED NP S Y+ATK +++ + A+ H Y Sbjct: 121 ----EVQITNFVYASSSSVYGKNKKNPYSVEDRVDNPISLYAATKKANELMAHAYSHLYE 176 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + L ++ + ++ G RD+ Y++D V Sbjct: 177 IPCTGLRFFTVYGPWGRPDMALFLFTDAILHNRPINVFNYGNMRRDFTYIDDIVAGTISA 236 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +++ E +N+G ++ D + I L K+ + +PG + Sbjct: 237 IERPVPYEIFNLGNSDSTSLKDFIEAIESELGQKAEKN--------MLPMQPGDVAETSA 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + ++G+ P+ ++ G+ + WY Sbjct: 289 DITSSREKLGFTPKTPLKEGIRAFIAWY 316 >gi|327402722|ref|YP_004343560.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] gi|327318230|gb|AEA42722.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] Length = 316 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 29/330 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ +TGGAGFI + L L+ + I +V D NS+ ++ + ++ D+ D Sbjct: 6 RIFITGGAGFIANTLISNLIEENTI--IVFDNFHRDTISNSI--FAKHKNLTIIKGDVLD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E + +++ + +V+ A + +D I + +T N+IGT LE R+ Sbjct: 62 KELLTKSME--GAEIVVHAAGIAGIDTVIKDPVKTMTVNMIGTANALEAARI-------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-----PYSATKASSDYLVLAWGHTYG 176 + RF+ ST E++GS+ +D + S+ Y+ +K + ++L A+ Y Sbjct: 112 NQVSDRFIDFSTSEIFGSMAFKSTEKDETVSGSAGEARWTYAVSKLAGEHLTHAYHAQYK 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + N YGP E + + I + ++ +F+ GDG +R W YV+D V L Sbjct: 172 LPTVTVRPFNVYGPGQTGEGAMQIFIKKALKNEEIFINGDGSQIRAWCYVDDFVDCLMRC 231 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ + +GE +N+G N R ++ +G L + + + I+F D+ D Sbjct: 232 LENPKAVGESFNLG--NARA---VITTLG--LAQTVCRVLNSKSEIKF-RDQLSADIELR 283 Query: 296 IDSSKIKSE-IGWFPQENMESGLNKTVCWY 324 I S K E +G+ + ++E G+ +T ++ Sbjct: 284 IPSVKKTEELLGFKAKVDLEEGIIRTAEYF 313 >gi|73667590|ref|YP_303605.1| GDP-mannose 4,6 dehydratase [Methanosarcina barkeri str. Fusaro] gi|72394752|gb|AAZ69025.1| GDP-mannose 4,6 dehydratase [Methanosarcina barkeri str. Fusaro] Length = 373 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 48/342 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G G+ L L+ I V I + + + N + K+ + N+ F+ D Sbjct: 6 LITGITGQDGAYLAELLLEKGYI-VHGIKRRSSSFNTARIDHLYKDPHERNVNFFMHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + ++ IGT LLE R+ L Sbjct: 65 LTDSTNLIRIIQEVQPDEIYNLAAQSHVQVSFETPEYTANSDAIGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+A K + ++ + + YGI Sbjct: 121 GFEKKT--RFYQASTSELYGKVQEVPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIF 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I +A TR+ G LY G+ + RDW + +D+V A++ Sbjct: 179 ACNGILFNHESPIRGETFVTRKITMAATRIKYGMQDRLYLGNLDSKRDWGFAKDYVEAMW 238 Query: 235 LVLKKGR-------IGERYNIGGNNERKNIDIVF---------------EIGFLLDALIP 272 L+L++ GE +++ R+ I++VF E+G +DAL Sbjct: 239 LMLQQEEPDDYVIATGETHSV-----REFIELVFKELGIDIIWQGKGEEEVG--IDALTN 291 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 K + + RP DSSK + ++GW P+ +E Sbjct: 292 KILVEVDPEYY---RPTEVEMLIGDSSKARRKLGWQPKVRLE 330 >gi|30023295|ref|NP_834926.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|229050931|ref|ZP_04194481.1| UDP-glucose 4-epimerase [Bacillus cereus AH676] gi|229072726|ref|ZP_04205928.1| UDP-glucose 4-epimerase [Bacillus cereus F65185] gi|229130511|ref|ZP_04259467.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-Cer4] gi|29898856|gb|AAP12127.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|228652850|gb|EEL08732.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-Cer4] gi|228710702|gb|EEL62675.1| UDP-glucose 4-epimerase [Bacillus cereus F65185] gi|228722389|gb|EEL73784.1| UDP-glucose 4-epimerase [Bacillus cereus AH676] Length = 330 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSKKAKEKLGWDPK 306 >gi|241205937|ref|YP_002977033.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859827|gb|ACS57494.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV- 57 MR +TG AGFIG L R L+ + V D LT Y L ++ + S +F V Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-DVTGFDGLTPYYNVKLKEMRHAALSQFPAFRPVI 59 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + +A+ +PD +++ AA++ V S+ + ++ +N+ G+ W+ Sbjct: 60 SMLEDRPALEAAVLAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGS----------WN 109 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 110 IMEIARRVEIRHLMLASTSSIYGANATVPFHETDRADEPLTIYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGP+ P+ + M+EG + +YG+G RD+ Y++D + A+ Sbjct: 170 HKIPTTAFRFFTVYGPWGRPDMALFKFTKNMLEGQPIEIYGEGNMSRDFTYIDDLIEAIV 229 Query: 235 LV------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + L + NIGG +D V + K+ Sbjct: 230 RLSAVVPSEENRLENTAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKALG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R + + G+ P ++ G+ V WYLD Sbjct: 282 RPAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVKAFVDWYLD 331 >gi|256752410|ref|ZP_05493269.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] gi|256748679|gb|EEU61724.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] Length = 316 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + L+ + +V+++D NL++ K + F DI Sbjct: 1 MKVLITGGAGFIGSNIADLLIEN-GYEVVIVD------NLSTGKHEFINKKAVFYNKDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE +PD +++ AA+ + +SI NI+GT LLE ++ + Sbjct: 54 DNDLYEVFEKE-KPDYVIHQAAQIDIQKSIKEPVFDAKVNILGTVNLLECSKSYKVK--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ VYG + E +P S Y +K + ++ + YG+ Sbjct: 110 ------KIIYASSAAVYGDPEYLAIDEKHKVDPISYYGISKHTPEHYFEVYRQLYGLKYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + ++++ ++GDG RD++YV+D +A L L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFVDKILKDERPIIFGDGNQTRDFVYVKDVAKANLLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG E NI N + E+ L++ ++ S + E R G +D Sbjct: 224 EKGD-NEIVNISTNKPTS----INELIDLMNKIMGTSLKPI----YAEPRKGDIVHSYLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K +GW P+ ++E GL +T+ +Y Sbjct: 275 NKKALDVLGWKPEYSLEEGLRETIEYY 301 >gi|70730444|ref|YP_260185.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas fluorescens Pf-5] gi|68344743|gb|AAY92349.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas fluorescens Pf-5] Length = 339 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/355 (24%), Positives = 151/355 (42%), Gaps = 54/355 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFL 55 M +++TG AGFIG+ L+ D QV +D Y L + Q F Sbjct: 1 MNILITGAAGFIGAHTALRLLKD-GHQVTGLDNFNDYYDPQLKRDRVRWVERQVGHFPLQ 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ D E + E +P ++N AA++ V S+ ++ +N+ G LLE R + Sbjct: 60 RLDLADSEGLERLFAEVRPQVVINLAAQAGVRYSLENPKAYLDSNLSGFLNLLEMCRRYP 119 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLV 168 + S+ VYG+ ++ PY +P S Y+A+K +++ + Sbjct: 120 VQ---------HLIYASSSSVYGA------NQQTPYKVSDNVDHPLSLYAASKKANELMA 164 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H +G+P YGP+ P+ L + +G + L+ G + RD+ Y++D Sbjct: 165 HSYSHLFGVPATGLRFFTVYGPWGRPDMSPILFADAISQGRPLKLFNYGMHQRDFTYIDD 224 Query: 229 HVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDAL 270 V +L +L K + + +NIGG + D V A Sbjct: 225 IVESLVRLLGKPPVRDPLWDREQPDPSTSMAPWRLFNIGGQRPVELKDYV--------AT 276 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + K H + ++ +PG D S +++ G+ PQ +E GL + V WYL Sbjct: 277 LEKLLGHKAQVEYLPLQPGDVLNTCADVSALENLTGFGPQVPLEEGLREFVQWYL 331 >gi|108803417|ref|YP_643354.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108764660|gb|ABG03542.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 315 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 148/333 (44%), Gaps = 55/333 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTG +GF G L RYL L++ V+ + AG L + + DI D Sbjct: 3 RALVTGASGFAGGYLVRYL---LELGYEVVGAVHGAGA--RLPDGCHRAVL-----DITD 52 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ +R + QPD I + A + + DEF N GT LLE R + Sbjct: 53 RQSLREVVAATQPDEIYHLAGIARPANDSV--DEFYEVNFGGTLKLLETVR--------E 102 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY---GIP 178 L + + YGS+ + SE + P + Y ++KAS+D L GH Y G+ Sbjct: 103 HAPDAAVLLVGSAYAYGSVGHPI-SEIELFKPVNHYGSSKASADLL----GHVYSLEGLR 157 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRAL 233 V+ + N+ GP P ++P + + +E V G+ +VRD+ V D VR Sbjct: 158 VVRARPFNHSGPGQSPAFVLPTLVEQFVEIEAGKREPVIRLGNLDSVRDFSDVRDIVRGY 217 Query: 234 YLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L L KGR GE YN+G G + R+ ++V E K+ EL + P Sbjct: 218 RLALLKGRSGEPYNLGSGRGTSVRELFEMVRE----------KAEQEVEL----QVEPSR 263 Query: 291 DRRYAI-----DSSKIKSEIGWFPQENMESGLN 318 R I D+SK + E+GW P+ ++E L+ Sbjct: 264 TRIIDIPYLVADTSKAREELGWEPEVSLEQTLH 296 >gi|114327400|ref|YP_744557.1| UDP-N-acetylglucosamine 4-epimerase [Granulibacter bethesdensis CGDNIH1] gi|114315574|gb|ABI61634.1| UDP-N-acetylglucosamine 4-epimerase [Granulibacter bethesdensis CGDNIH1] Length = 323 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/342 (26%), Positives = 151/342 (44%), Gaps = 39/342 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS----------LKEISQSN 50 M ++VTG AGFIG + R L+ + V+ ID NLNS L + + Sbjct: 1 MPVLVTGVAGFIGFHVARALMRQGE-TVIGID------NLNSYYDVGLKRARLAVLEREA 53 Query: 51 LFSFLQVDICDRECIRSALKE-FQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 FSF +VD+ DR + + + D IV+ AA++ V S+L ++ +NI+G +LE Sbjct: 54 RFSFFKVDLADRVAMAEFTRSCYSVDRIVHLAAQAGVRYSLLDPYAYVASNIMGHLAILE 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLV 168 R D + S+ VYG + F E + P S Y+ATK + + + Sbjct: 114 MARAL--------PDLRHLVYASSSSVYGGDLEAPFRESERIERPLSLYAATKRADELMS 165 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 A+ H +GIP YGP+ P+ + +G + L+ G+ RD+ Y++D Sbjct: 166 AAYDHLFGIPQTGLRFFTAYGPWGRPDMAYYAFAKAITQGEEIQLFDHGRLKRDFTYIDD 225 Query: 229 HVRALYLVLKK---GRIGERY-NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V + L + G R NIG N E+ +L+ L K+ +IR + Sbjct: 226 IVDGVIRCLDRPPSSADGARLINIGNNRPE-------EVSYLVQCL-EKAIGKKAMIRTL 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + A D + I G+ P+ ++ G+ + V W+ D Sbjct: 278 PCPLTDVQETAADITLIHELTGFKPRTELDEGIRRFVAWFRD 319 >gi|222055221|ref|YP_002537583.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221564510|gb|ACM20482.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 339 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/358 (24%), Positives = 155/358 (43%), Gaps = 50/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + + ++V D L G+L++L+ + F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLASHAIQQ-GMDLVVFDNLYREGSLSNLQWLKGLGKFRFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ I +++FQP A+ + A + + SI N +GT LLE RL+ + Sbjct: 60 NQNDITRLVQDFQPSAVFHLAGQVAMTTSIANPRMDFEVNAMGTHNLLEAIRLYAPDAA- 118 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------------GLFSEDMPYNPSSPYSATKASS 164 + ST++VYG L++ F E + SPY +K ++ Sbjct: 119 -------VIYSSTNKVYGDLEQYSYRETATRYECVDHPRGFDESTSLDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-----------EKLIPLAITRMIEGSHVFL 213 D +L + +G+ ++ S+ YG F ++ + + E + Sbjct: 172 DQYMLDYSRIFGLKTVVFRHSSMYGGRQFATYDQGWIGWFCQQAVATKAGTLKE--PFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLV----LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 G+G+ VRD L+ +D + ALY ++K + G +NIGG E + Sbjct: 230 SGNGKQVRDVLHADDMI-ALYFSAFENIEKAK-GNAFNIGGGIENSLSLLELFGLLEEIG 287 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + Y R + R R + D +K K+ +GW P+ + G+ + + W N Sbjct: 288 KLKLDY------RKLPPRESDQRVFVADLAKAKTLMGWSPKVSASDGVKRMLEWVSGN 339 >gi|170757627|ref|YP_001782321.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] gi|169122839|gb|ACA46675.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] Length = 330 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 33/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDI 59 +++VTG GFIGS L L+ +L V + + N + + + + + D+ Sbjct: 7 KVLVTGAEGFIGSHLTERLI-ELGADVTALVQYNSFNNWGWIDTFDKRVKDSINVVTGDV 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + ++ +K D + + AA + S L ++ TN+ GT +LE R + Sbjct: 66 REYDGMKRIIK--GQDVVFHLAALIAIPYSYLSPMAYVRTNVEGTANVLEACRDY----- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + + ST E YG+ E P SPYSATK +D + ++ ++ +P+ Sbjct: 119 ----DIQKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSATKIGADKIAESFYRSFSMPI 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 175 ATIRPFNTYGPRQSARAVIPTIISQILAGKTEIKLGSLAPTRDFNYVKDTAEAFIKIAES 234 Query: 240 GR-IGERYNIGGNNE-------RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + +GE N G N E +K IDI IG +D + E IR + + Sbjct: 235 DKTVGEVINAGSNYEISIGDTVKKIIDI---IGKDVDI-----FCDDERIR--PENSEVN 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +A D+SKIK W PQ +++ GL +TV W N +++ Sbjct: 285 RLWA-DNSKIKELTEWRPQYSLDCGLKETVQWIKTNMHYFK 324 >gi|149914160|ref|ZP_01902691.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] gi|149811679|gb|EDM71512.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] Length = 337 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 ++ +TG AGFIG L ++L+ + V D +T Y L + + Q+ F Q Sbjct: 3 KVFITGTAGFIGFHLAQHLLKE-GFAVHGFDGITDYYDVRLKQRRHQMLLQNAHFKATQA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ + A+ EF PD IV+ AA++ V S+ ++ N+IGTF +++ + Sbjct: 62 MLEDKNAVDRAIDEFAPDVIVHLAAQAGVRYSLENPRAYLDANVIGTFNVMDAAK----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYG 176 + + L ST VYG+ + F E + + Y+ATK +++ + A+ H Y Sbjct: 117 ----RHEVEHLLMASTSSVYGANTEMPFVETEKADTQLTIYAATKKANESMAHAYAHLYD 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP+ P+ + + ++EG + +Y G RD+ YV+D V + L+ Sbjct: 173 LPTTMFRFFTVYGPWGRPDLALFKFVDTILEGRPIDIYNHGDMYRDFTYVDDLVHGIRLL 232 Query: 237 LKKG--------RIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + I E NIG + + + +D V I L ++Y Sbjct: 233 IDAAPKWLEPSEPIPEGDSISPVAPYRVVNIGNSQKVRLLDFVDVIEAELGIKANRNY-- 290 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG ++ ++ G+ PQ ++ G+ K V W+ D Sbjct: 291 ------MDMQPGDVPATWANADLLQQLTGYKPQTDIRDGIAKFVTWFRD 333 >gi|169826853|ref|YP_001697011.1| putative UDP-glucose 4-epimerase [Lysinibacillus sphaericus C3-41] gi|168991341|gb|ACA38881.1| Putative UDP-glucose 4-epimerase [Lysinibacillus sphaericus C3-41] Length = 308 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 30/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG GFIGSA+ R + V +ID L+ G+L ++ +S L + ++ ++C Sbjct: 1 MNVLVTGGYGFIGSAVGRRFFEE-GASVYIIDNLS-TGHLRNVDFEHKSYLLN-VEDEVC 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + KE D +++ AA++ V +S+ + I TNI+G +L LS Sbjct: 58 EH-----LFKETHFDVVIHCAAQTSVQQSLQEPVKDILTNIVGLSQML--------FLSS 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + F+ S+ VYG+ E P S Y K+ + W Y +P+L Sbjct: 105 KYKVK-HFVFASSAAVYGNSHYPPLEETDVCEPISMYGLNKSIGETYCEKWQKDYRLPIL 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N +GP + +IP + +EG +YGDG+ RD++YV+D A+Y + Sbjct: 164 IYRFANVFGPRQQMQGEAAVIPSMLKSSMEGRPFTIYGDGEQTRDFIYVDDIADAIYAGV 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 R+ YN+ N ++ L+ + +H I++ R G ++ Sbjct: 224 HS-RLQGIYNVSTNEAWSLHQVI---------LLLQHLNHPLEIQYAPAREGDIEHSFLN 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 + K+ + IGW P+ + G+ +T+ Sbjct: 274 NDKLANAIGWRPKISFAEGIERTL 297 >gi|89899467|ref|YP_521938.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118] gi|89344204|gb|ABD68407.1| NAD-dependent epimerase/dehydratase [Rhodoferax ferrireducens T118] Length = 335 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG L+ +VL +D L Y L N LK +S F F++ Sbjct: 1 MKILLTGAAGFIGMTTALRLLARGD-EVLGLDNLNDYYDVTLKENRLKRLSPHAGFRFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + + D +++ AA++ V S+ +I +NI+G +LE R Sbjct: 60 MDVADRQGMAQLFADEKFDRVIHLAAQAGVRYSLQNPHAYIDSNIVGFMNVLEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG FSE D +P S Y+ATK +++ + + H Y Sbjct: 116 -----HTQVQHLVYASSSSVYGGNTNMPFSEHDSVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++EG + ++ GQ RD+ +V+D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNYGQMQRDFTFVDDIVEGVVR 230 Query: 236 VLKK----------GRIGER--------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL + R +NIG N +D + A I ++ Sbjct: 231 VLDRVACPNPVYDPARADPATSNAPYRVFNIGNNKPVPLLDFI--------ACIEEALGR 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + G ++ + +G+ P +E G+ + V WY D Sbjct: 283 KAEKNLLPLQDGDVPATYANTDALNDWVGFVPGTPIEQGIARFVAWYRD 331 >gi|134300858|ref|YP_001114354.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] gi|134053558|gb|ABO51529.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] Length = 343 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 29/338 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 ++TG AGFIG L + L+ + +V+ +D + Y NL LK + F ++ DI Sbjct: 15 LITGAAGFIGYFLSKLLL-EQGCRVIGVDNINDYYDVNLKYARLKLLKPFEKFISIKGDI 73 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ I +E++P+ +VN AA++ V S+ D +I +N IG + +LE R ++ ++ Sbjct: 74 SDKAMIMKIFEEYKPNIVVNLAAQAGVRYSLENPDAYIQSNTIGFYNILEACR--YNPVN 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYG+ K F E D +P S Y+ATK S++ + + H Y IP Sbjct: 132 H-------LVYASSSSVYGANKKVPFEETDFVDHPVSLYAATKKSNELMAHTYSHLYKIP 184 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN--VRDWLYVEDHVRALY 234 YGP P+ + +G + ++ GD +N RD+ Y++D V + Sbjct: 185 ATGLRFFTVYGPMGRPDMAYFGFTDKYFKGEPIRIFNNGDFENDLYRDFTYIDDIVEGVE 244 Query: 235 LVLKKG---RIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRP 288 +L I R +NIG N+ K + + + L I + ++ I+ D P Sbjct: 245 RLLSNAPTDAIPHRVFNIGNNSPEKLMVFIETLEKALSKTIGREVVFDKIFEPIKAGDVP 304 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 YA + ++ +G+ P+ ++E GL + WY++ Sbjct: 305 A---TYA-STDLLQEAVGFKPETSIEEGLQRFADWYVE 338 >gi|294666107|ref|ZP_06731365.1| nucleotide sugar epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604121|gb|EFF47514.1| nucleotide sugar epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 321 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG++ CR L + V+ +D Y L + + ++D Sbjct: 1 MTILVTGAAGFIGASTCRALAARGET-VVGLDNYNSYYDPQLKHDRVATLCPGLDIRRLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDREGLAALFDEIQPTRVVHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 L---KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSDAPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVDW 312 >gi|229094366|ref|ZP_04225440.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-42] gi|228689044|gb|EEL42869.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-42] Length = 330 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQRDKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEI 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|229175930|ref|ZP_04303427.1| UDP-glucose 4-epimerase [Bacillus cereus MM3] gi|228607524|gb|EEK64849.1| UDP-glucose 4-epimerase [Bacillus cereus MM3] Length = 330 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPK 306 >gi|15678408|ref|NP_275523.1| UDP-glucose 4-epimerase-like protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2621441|gb|AAB84886.1| UDP-glucose 4-epimerase homolog [Methanothermobacter thermautotrophicus str. Delta H] Length = 316 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 36/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGG GFIGS L L+ + +V VID L+ G+ ++L++ +L ++ I Sbjct: 4 MDVAVTGGLGFIGSHLTDELL-ERGNRVTVIDDLS-TGSPDNLRDPHHEDL-EIIEGSIN 60 Query: 61 DRECIRSALKEFQ-PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + K FQ D + + AA + V S+ N GT +L ++ Sbjct: 61 DLDL----EKVFQGKDYVFHQAALASVPESVRDPLRCHRVNATGTLRVL---------MA 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + ST VYG+ + ED P SPY+ +K + +Y + G+ Sbjct: 108 SSRAGVRKVVNASTSAVYGNNPEIPLREDARPMPLSPYAVSKVTGEYYCQVF-EDQGLET 166 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP P+ +IP I ++ G +YGDG+ RD++YV D VRA + Sbjct: 167 VSLRYFNVYGPRQRPDSQYAAVIPRFIDALLSGRSPEIYGDGEQSRDFIYVGDVVRA-NI 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEI--GFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + R YN+ G + ++ +F+I G L P+ ++++RPG R Sbjct: 226 FLAESRGSGVYNVAGGSS-VTVNRLFDIISGILESDAEPE---------YLDERPGDVRH 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+S++ + G+ P+ +E GL +TV W+L+ Sbjct: 276 SLADTSRLAA-AGFRPEVGLEEGLMRTVEWFLE 307 >gi|56476329|ref|YP_157918.1| nucleoside-diphosphate-sugar epimerase [Aromatoleum aromaticum EbN1] gi|56312372|emb|CAI07017.1| predicted Nucleoside-diphosphate-sugar epimerase [Aromatoleum aromaticum EbN1] Length = 335 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 80/346 (23%), Positives = 158/346 (45%), Gaps = 35/346 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG +C+ L+ +V+ +D L Y L + L ++ F F++ Sbjct: 1 MKVLITGAAGFIGMHVCQVLLARGD-EVVGLDNLNDYYDPRLKEDRLARLAPHPRFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + + +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LDVADRDAMERLFAAERFERVVHLAAQAGVRYSLQNPHAYVDSNLVGFMNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG K FSE D +P S Y+ATK +++ + + H Y Sbjct: 116 -----HGGVRHLVYASSSSVYGGNTKMPFSEHDSVDHPVSIYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++EG + ++ G+ +RD+ Y++D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTRAILEGRPIDVFNHGRMMRDFTYIDDIVEGVVR 230 Query: 236 VLKK---------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 L + R Y + ++++ I + DA+ K+ + Sbjct: 231 TLDRVAEPDPGFDALQPDPARSNAPYRVFNIGNHDPVELMAFIEAIEDAIGRKAEKN--- 287 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+ + G D++++ + G+ P ++ G+ + V WY D Sbjct: 288 --FLPLQDGDVPATYADTAELNAWTGFKPGTSVRDGVGQFVAWYRD 331 >gi|282862605|ref|ZP_06271666.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] gi|282562291|gb|EFB67832.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] Length = 335 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 32/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ + V D L+ +G+ ++ + F FL D+ D Sbjct: 14 RALVTGGAGFLGSHLCERLLEG-GVGVDCADNLS-SGSARNVAHLVGRAGFRFLNCDVSD 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 C + + D +++FA + + E + +GT L L+ Sbjct: 72 PACAQELTGPY--DLVLHFACPASPADYLRMPLETLDVGSLGTRNL----------LAVA 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 ++D R L ST EVYG ED P P S Y +K S+ LV A G Sbjct: 120 ERDDARLLLASTSEVYGDPLVHPQREDYWGNVNPVGPRSVYDESKRFSEALVTAHAGARG 179 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP + +P I + + G + + GDG R YV+D + + Sbjct: 180 TNAGIVRLFNTYGPRMRAHDGRAVPTFICQALAGEPLTIAGDGSQTRSLCYVDDTLDGVM 239 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 V R NIGG++E +I + + + S + ++ DRP D R Sbjct: 240 RVAAS-RSVRPVNIGGSDETTVREIARRV-------VKLTNSASRIVSI--DRPVDDPER 289 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ ++ GW P + E GL +T+ ++ Sbjct: 290 RRPDTTLVREMFGWEPSVSWEEGLERTIAYF 320 >gi|196036309|ref|ZP_03103707.1| UDP-glucose 4-epimerase [Bacillus cereus W] gi|195991101|gb|EDX55071.1| UDP-glucose 4-epimerase [Bacillus cereus W] Length = 330 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEI 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|116624976|ref|YP_827132.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116228138|gb|ABJ86847.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 317 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 145/329 (44%), Gaps = 33/329 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGSA+ R L+ + +V+VID L +G ++L+EI F + DI + E Sbjct: 5 VVTGGAGFIGSAITRRLLAEGAGRVVVIDNL-LSGRESNLEEIRAR--IDFQRADIRNYE 61 Query: 64 CIRSALKEFQPDAIVNF--AAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I ++ A V F AA V RSI N GTF +L + Sbjct: 62 EIAPLIR----GAAVVFHEAAIPSVPRSIEDPVPSHDVNANGTFNVLRAAK--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ++ YG + EDM P SPY+ K +Y + YG+ + Sbjct: 109 EGQAGRVVYAASSSAYGDTEVLPKVEDMTPRPKSPYALQKLLGEYYCNVFTGVYGLETVA 168 Query: 182 SNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 N YGP P ++ L + + + ++GDG+ RD+ YVED L Sbjct: 169 LRYFNVYGPRQDPGSPYSGVLSLFMKAALNRTAPTIFGDGEQSRDFTYVEDVAELNLKAA 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDRRYA 295 KG G+ YN GGN R ++ + + L+ + IP Y R G R Sbjct: 229 RAKGVAGKVYN-GGNGGRITLNQAWALLQKLEGIEIPSVYG--------PPRAGDVRDSQ 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ E+G P+ + E G+ T+ WY Sbjct: 280 ADTTLAVRELGHAPRYSFEEGMRLTLEWY 308 >gi|303242211|ref|ZP_07328700.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] gi|302590293|gb|EFL60052.1| NAD-dependent epimerase/dehydratase [Acetivibrio cellulolyticus CD2] Length = 324 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 139/332 (41%), Gaps = 35/332 (10%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGG GFIGS + L+ + V VID G +L+ + ++ DI D Sbjct: 1 MTGGCGFIGSHIVDRLLLEGH-NVTVIDNFI-TGRPENLEHQKGNPDLKIVEADITDERS 58 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 I K+ D + + AA + + SI +++ +N+ GTF +LE +R K Sbjct: 59 ITPYFKDI--DWVFHLAAVADIVPSIQEPEKYFRSNVDGTFSVLEASR---------KCG 107 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 RF+ ++ YG + E P PY+ TK + LV+ WG Y +PV+ Sbjct: 108 IKRFVYSASSSCYGIPEVYPTPETAEAKPQYPYALTKYMGEQLVMHWGQLYKLPVISLRL 167 Query: 185 SNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N YG + + + + + G + GDG RD+ YV D A K Sbjct: 168 FNVYGTRSRTSGTYGAVFGVFLAQKLAGKPYTVVGDGTQTRDFTYVTDVANAFVTAAKSD 227 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +N+G + + L++ L + I +I RPG D++K Sbjct: 228 ITNMIFNVGSGG-------TYSVNRLVELLGGE-------ITYIPKRPGEPDCTFADTTK 273 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I+ ++GW P + G+N+ L N +WR Sbjct: 274 IRKQLGWKPNVTFDEGVNEV----LKNIDYWR 301 >gi|302534379|ref|ZP_07286721.1| UDP-glucose 4-epimerase [Streptomyces sp. C] gi|302443274|gb|EFL15090.1| UDP-glucose 4-epimerase [Streptomyces sp. C] Length = 338 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 143/330 (43%), Gaps = 38/330 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R ++ L +K+ +L++ +E + + Sbjct: 1 MTFLITGGAGYIGAHVVRAML-------LAGEKVVVFDDLSTGREDRVPEGVPLVTASVL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A++E + +V+ A + V S+ + N+ G +LLE + Sbjct: 54 DRLALDEAIREHKITGVVHLAGKKQVGESVEKPLYYYRENVQGLTVLLE---------AV 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG D +E+ P P SPY TK + ++LV A G +GI Sbjct: 105 AAAGIRNFLFSSSASVYGMPDVDSVTEETPCKPLSPYGETKLAGEWLVRAAGKAHGISTA 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE L+P+ R G ++G DG +RD+++VE Sbjct: 165 CLRYFNVAGAA-TPELADTGVFNLVPMVFERYDAGEGARIFGDDYPTPDGTCIRDYIHVE 223 Query: 228 D----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D HV A + + G GE ++ N R V E+ LL+A +Y+ R Sbjct: 224 DLADAHVVAARRLAEWGAAGEYKDLTVNIGRGEGVSVKEMVELLNAGTGHTYAPVVTPR- 282 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 RPG + + +I SE+GW + ++ Sbjct: 283 ---RPGDPAKVVASADRIASELGWKARHDV 309 >gi|42784425|ref|NP_981672.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] gi|42740357|gb|AAS44280.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] Length = 330 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKRLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|332307548|ref|YP_004435399.1| NAD-dependent epimerase/dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174877|gb|AEE24131.1| NAD-dependent epimerase/dehydratase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 338 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 44/352 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIG +C+ L+ +V+ ID + G LN L S S F+ Sbjct: 1 MKVLVTGAAGFIGYHVCQVLLTRGD-EVVGIDNINDYYDVNLKHGRLNELAAHSNSKNFN 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+++DI R + + E + D +V+ AA++ V SI +I +NI+G +LE R Sbjct: 60 FIKLDIAQRSEMEALFAEHKFDKVVHLAAQAGVRYSIENPHAYIDSNIVGFTNILEGCR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 + S+ VYG+ + FS D +P S Y+A+K +++ + + Sbjct: 119 --------HNAVQHLVYASSSSVYGANESMPFSVSDNVDHPVSLYAASKKANELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP+ P+ + ++E + +Y G + RD+ Y++D V Sbjct: 171 HLYDLPTTGLRFFTVYGPWGRPDMALFKFTKAILEDDPIQVYNFGNHRRDFTYIDDIVSG 230 Query: 233 LYLVLK---------KGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + L +G+ + YNIG +D + L+A + K Sbjct: 231 VISTLDHNAQRNSQWQGKTPDPSSSKAPWRVYNIGAQTPVNLLDFITT----LEAALGKE 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +PG + + ++G+ P ++ G+ V WY D Sbjct: 287 ----AVKELLPMQPGDVPDTFANVQALVDDVGYQPTTQLKEGITNFVNWYKD 334 >gi|319954650|ref|YP_004165917.1| udp-glucuronate 4-epimerase [Cellulophaga algicola DSM 14237] gi|319423310|gb|ADV50419.1| UDP-glucuronate 4-epimerase [Cellulophaga algicola DSM 14237] Length = 346 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 46/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIG + L +ND L +L G N Sbjct: 1 MKVLVTGAAGFIGFHTAQKLLDNGHEVVGLDNINDYYDTDLKFARLKELGILRKNATLFN 60 Query: 45 EISQS----NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 +S S + F F++++I DR+ + + E D + N AA++ V SI + +I +N Sbjct: 61 SLSNSETFKDQFKFIRLNIEDRKNLPALFAEENFDIVCNLAAQAGVRYSIENPETYIDSN 120 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSA 159 I+G +LE C + + S+ VYG + F + D +P S Y+A Sbjct: 121 IVGFLNILE-------CCRHHSINHLVYA--SSSSVYGLNKEVPFKTTDTVDHPISLYAA 171 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 +K +++ + + H YG YGP+ P+ I L + + + ++ G Sbjct: 172 SKKANELMAHTYSHLYGFATTGLRFFTVYGPWGRPDMAIYLFTDAISKNKPIKVFNHGDM 231 Query: 220 VRDWLYVEDHVRALYLVLKKG---RIGER-----YNIGGNNERKNIDIVFEIGFLLDALI 271 RD+ YV+D V ++ +++K RI + YNIG N+ K D + E I Sbjct: 232 ERDFTYVDDIVEGVFRIIEKDTKERITKNEGYKIYNIGNNDSVKLTDFIIE--------I 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ + T F+ +PG R + ++ ++ + P+ ++ SG+ K V WY Sbjct: 284 EKNLAVTAQKEFLPMQPGDVARTWANVDELITDYNYSPKTSVSSGIKKFVQWY 336 >gi|220909174|ref|YP_002484485.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] gi|219865785|gb|ACL46124.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] Length = 336 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 45/348 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQ 56 R++VTG AGFIG L + L+ QV+ +D L ++N K+ + Q N FSF Q Sbjct: 3 RILVTGAAGFIGFHLSQKLLRQGD-QVIGLDNLNSYYDVNLKKDRLAQLLPQEN-FSFYQ 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + D +VN AA++ V S+ ++ +N++G +LE R Sbjct: 61 LDLSDRQGMADLFAREDIDIVVNLAAQAGVRYSLENPHTYVDSNVVGFLNILEGCR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ K FS D+ +P S Y+ATK +++ + + H + Sbjct: 117 -----HRGIQHLVFASSSSVYGANTKLPFSVHDLVDHPISLYAATKKANELMAHTYSHLF 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+PV YGP+ P+ + P+ R ++ G + ++ G+ RD+ Y++D V Sbjct: 172 GLPVTGLRFFTVYGPWGRPD-MAPMQFARSILAGEPINVFNYGKMRRDFTYIDDIVNGTI 230 Query: 235 LVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + + + R YNIG + ++++++ I L L + Sbjct: 231 QTIAQIPTPNPHWSGHSPDPATSKAPYRIYNIGNH---QSVELLHFISLLEQYLNKPAQK 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ +PG D S + ++G+ P +E G+ + V WY Sbjct: 288 N-----FLPLQPGDVLETHADISDLVQDVGFHPGTPIEVGVERFVEWY 330 >gi|323691448|ref|ZP_08105720.1| NAD dependent epimerase/dehydratase [Clostridium symbiosum WAL-14673] gi|323504494|gb|EGB20284.1| NAD dependent epimerase/dehydratase [Clostridium symbiosum WAL-14673] Length = 324 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 142/332 (42%), Gaps = 29/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDICD 61 +VTGGAGFIGS LC ++N L +V +D L+ N EI NL ++F++ DI + Sbjct: 14 FLVTGGAGFIGSNLCEAILN-LGCKVRCLDNLSTGKKENV--EIFLDNLNYTFIKGDITN 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A + D +++ AA V RSI + NI GT ++E R Sbjct: 71 LDTCIEACQNV--DYVLHEAAWGSVPRSIEMPLYYEKVNIGGTLNMMEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +F+ S+ VYG E N SPY+ TK + + + YG+ Sbjct: 120 QNGIKKFIYASSSSVYGDHPALPKKEGQEGNVLSPYALTKKVDEEYGKLYKNLYGLDTYG 179 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +G PE +IP I +++ + GDG+ RD+ Y+E+ + A Sbjct: 180 LRYFNVFGRRQDPEGAYAAVIPKFIKQLLNNEKPVINGDGKQSRDFTYIENVIEANLKAC 239 Query: 238 KKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 K GE YNI IDI + I L I F DR G + Sbjct: 240 KASNEGSGEAYNIAFGGREYLIDIYYHIAKALKKDIKPD--------FGPDRAGDIKHSN 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK + G+ P + E G+ + + WY +N Sbjct: 292 ADISKARKIFGYNPDWDFEKGIAEAIGWYREN 323 >gi|296114235|ref|ZP_06832890.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter hansenii ATCC 23769] gi|295979311|gb|EFG86034.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter hansenii ATCC 23769] Length = 333 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 50/351 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIG + R L+ + +V+ ID +T ++ +LK + L F Sbjct: 1 MRVLVTGSAGFIGFHVARRLLTEGH-EVIGIDGMTPYYDV-ALKRRRHALLRAYPRFVAH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ + DR + ++ + I++ AA++ V D +I +N++GT L++ R Sbjct: 59 EIMLEDRAALARVVEGARISVIIHLAAQAGVRYGAHRPDTYIDSNVVGTSNLIDLAR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLV 168 ++ D F+ ST VYG + D+P+ P S Y+ATK +++ L Sbjct: 116 -GMALDH-----FVLASTSSVYGP------ATDLPFIETERCDYPLSLYAATKKATEGLA 163 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H G PV YG + P+ + L + ++ G + +YG+GQ RD+ Y++D Sbjct: 164 HSFSHLSGTPVTALRFFTVYGTWGRPDMALFLFVDAILRGHAIDVYGNGQMERDFTYIDD 223 Query: 229 HVRALYLVLKKGRI-GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 V ++ VL + G++ N+G +D V I L Sbjct: 224 VVESVLRVLPCIPVRGDKATGCSPVAPYRVVNVGNGQPVPLMDFVHAIETCL-------- 275 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T F+ +PG +R D+S ++ G+ P+ ++ G+ + V WY D Sbjct: 276 GRTARTNFMPMQPGDMQRTWADASLLEHLTGFRPKTSLRVGVARFVAWYRD 326 >gi|172037883|ref|YP_001804384.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] gi|171699337|gb|ACB52318.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] Length = 336 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 50/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+V D L+Y G+ +K++ Q L + D +R Sbjct: 10 ILVTGGAGYIGSHAVLSL-QKAGYHVIVFDNLSY-GHPEIIKDVLQVEL---IVGDTQNR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+++FAA V S+ + N++GT LLE + Sbjct: 65 TLLDELFSTRNIAAVMHFAAFIAVGESVQAPAIYYQNNVVGTLTLLE-------AMMAAN 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 ++F F ST +YG + +E P +P SPY+++K + ++ + YG+ ++ Sbjct: 118 INKFVF--SSTCAIYGMPQEIPMTEQHPNHPLSPYASSKYMVEKILKDFDQAYGLKSVIF 175 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S N G H PE LIPLA +T + + H+F++G DG +RD+++V Sbjct: 176 RYFNASGADPSGNLGEDHTPETHLIPLALLTALKKRDHLFIFGTDYDTHDGTAIRDYIHV 235 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE--- 279 D H+ L +L G E +N+G N GF + +I + T Sbjct: 236 NDLASAHILGLEYLLNGGE-SEMFNLGNGN-----------GFSVKEVIDMAKKVTGIDF 283 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 L++ + RPG S K +S +GW PQ ++++ +N W+ Sbjct: 284 LVKESDRRPGDVPILVGSSQKAQSVLGWQPQYSDLQTIVNHAWQWH 329 >gi|256390665|ref|YP_003112229.1| UDP-glucose 4-epimerase [Catenulispora acidiphila DSM 44928] gi|256356891|gb|ACU70388.1| UDP-glucose 4-epimerase [Catenulispora acidiphila DSM 44928] Length = 323 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 92/345 (26%), Positives = 150/345 (43%), Gaps = 53/345 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+V GGAG++GS LV + +V V+D L+ G+ +++ + +F D+ Sbjct: 1 MRLLVIGGAGYVGSVTSAVLV-EAGHEVTVVDDLS-TGHRDAVPAGA-----AFRHADVL 53 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ + L+E DAI++FAA S V S++ + NI T LLE R Sbjct: 54 DQRQLGDVLREVAAGGPIDAILHFAARSLVGESVVEPARYFRHNITTTANLLEAMR---- 109 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + ST YG D +EDMP P++PY A+K ++D ++ YG Sbjct: 110 -----DHGIGTIVFSSTAACYGEPDATPITEDMPTVPTNPYGASKLAADQMLTFAAPAYG 164 Query: 177 IPVL---LSNCSNNYGP--------YHFPEKLIPLAITRMIEGSHVFLYG------DGQN 219 I + N + YGP H +L+ +A E S ++G DG Sbjct: 165 IAAVSLRYFNVAGAYGPQGERHEVETHLIPRLLDVAAGNAPEAS---VFGTDYPTPDGTA 221 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +RD+++V D A L L + GE N+G +++ + A +P + Sbjct: 222 IRDYIHVRDLAEAHLLALGAAKQGEHLICNLGTGTGFSVYEVLEAVRKATGAAVPAA--- 278 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 E R R G R + + ++ +GW P+ L++TV Sbjct: 279 -EKPR----RAGDPARLVASAERARTVLGWSPERTE---LSETVA 315 >gi|118480305|ref|YP_897456.1| UDP-galactose 4-epimerase [Bacillus thuringiensis str. Al Hakam] gi|196045725|ref|ZP_03112955.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] gi|118419530|gb|ABK87949.1| UDP-galactose 4-epimerase [Bacillus thuringiensis str. Al Hakam] gi|196023556|gb|EDX62233.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] Length = 330 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|319788577|ref|YP_004148052.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis 11-1] gi|317467089|gb|ADV28821.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis 11-1] Length = 328 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 42/342 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+++VTG AGF+G L+ +V+ ID NLN+ ++ Q L Sbjct: 5 MKILVTGAAGFVGFHTTTRLLG-AGHEVVGID------NLNAYYDVGLKQGRLALLKDRP 57 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 FSF ++D+ DR + S ++ D +++ A++ V S+ ++ +N+ G +LE Sbjct: 58 GFSFTKLDLADRAGMASLFQDHAFDLVLHLGAQAGVRYSLENPFAYLDSNLTGMLTVLE- 116 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVL 169 C K + S+ VYGS K F +ED P S Y+ATK + + + Sbjct: 117 -----GCRHSGVK---HLVYASSSSVYGSNTKLPFATEDRVDTPVSLYAATKKADELMAH 168 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y P+ YGP+ P+ ++ G + +Y G RD+ Y++D Sbjct: 169 TYAHLYRFPITGLRFFTVYGPWGRPDMAYYKFANAIMAGKPIDVYNHGDMRRDFTYIDDI 228 Query: 230 VRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V A+ ++ +G + YN+G N+ + +D++ LL+ L+ K R Sbjct: 229 VDAIEAIVAQGPKPSGMDVPHKVYNLGHNHPEQLLDMI----ELLEGLLGKQAEK----R 280 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D S I + G+ + ++ +GL + V WY Sbjct: 281 MLPMQPGDVYATYADISDISRDYGYTTKTSLANGLKQFVSWY 322 >gi|110638800|ref|YP_679009.1| UDP-galactose 4-epimerase [Cytophaga hutchinsonii ATCC 33406] gi|110281481|gb|ABG59667.1| UDP-galactose 4-epimerase [Cytophaga hutchinsonii ATCC 33406] Length = 333 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 151/327 (46%), Gaps = 48/327 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS R L N L QV+V+D L Y +E ++ F++ DI ++ Sbjct: 4 VLVTGGAGYIGSHAVRALAN-LNYQVIVLDNLIYG-----HREAIVNSEVRFVEGDIANK 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + LK ++ DA+++FAA ++V S+ ++ N+ + LL+ R + Sbjct: 58 ALVIDILKTYKVDAVMHFAAFAYVGESVTEPTKYYNNNLAASITLLDAMR---------E 108 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YGS E P P +PY A+K + ++ + H YGI Sbjct: 109 AGCKNIIFSSTCASYGSPKYMPIDEAHPQEPINPYGASKWMLERVIKDYHHAYGINYAFL 168 Query: 182 -----SNCSNN--YGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 S CS + G H PE LIPL I + I+G + ++G DG VRD+++ Sbjct: 169 RYFNASGCSADGLIGEDHDPEPHLIPL-ILKAIKGERDAITVFGTDYETPDGTCVRDYIH 227 Query: 226 VED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H++A YL+ KG + G + + + ++DA ++ Sbjct: 228 VEDLADAHIKAFTYLLSGKGPVICNLGTG---------VGYSVKEMIDAA-ERATGKKVP 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGW 307 +++ E R G ++ K E+GW Sbjct: 278 VKYGERRAGDPSHLVANAEKAWKELGW 304 >gi|288941681|ref|YP_003443921.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] gi|288897053|gb|ADC62889.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] Length = 323 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 48/329 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAG+IGS C+ L + + +D L Y G+ +++ + L++ DI D Sbjct: 4 VLVTGGAGYIGSHTCKALAC-AGYRPITLDNLVY-GHEWAVR-------WGPLEIGDISD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R C+ + ++ +P+A+++FAA ++V S+ + N+ GT LLE R Sbjct: 55 RACLDAVIERHRPEAVIHFAAYAYVGESVRDPGRYYRNNVAGTLTLLEAMR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + ST YG D+ +ED P P +PY A+K + ++ + +G+ + Sbjct: 106 DHAIPHIVFSSTCATYGIPDRTPITEDHPQRPINPYGASKLMVERMLADFEQAHGLGWIA 165 Query: 182 --------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 ++ G H PE LIPLA+ G + ++G DG +RD+++ Sbjct: 166 LRYFNAAGADPEGEVGEDHDPETHLIPLALQAAAGRGPQLQVFGDDYPTPDGSCIRDYIH 225 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HVR+L L+ G +N+G ++++ + +P++ Sbjct: 226 VADLAEAHVRSL-AHLRAGEGSGAFNLGTGQGASVLEVIAAAERVTGRPVPRAIG----- 279 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG D+ K + +GW P+ Sbjct: 280 ---PRRPGDPPVLYADADKARRLLGWEPR 305 >gi|197334024|ref|YP_002154955.1| UDP-glucuronate 5'-epimerase [Vibrio fischeri MJ11] gi|197315514|gb|ACH64961.1| UDP-glucuronate 5'-epimerase [Vibrio fischeri MJ11] Length = 334 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 157/349 (44%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGSA L N +V+ ID L Y NL + E + +LF F+ V Sbjct: 1 MKYLVTGVAGFIGSATANKL-NIAGHEVIGIDNLNGYYDVNLKQARLERIKHDLFRFISV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR+ + S +E + D +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 DIADRKAMESLFEEEKFDRVIHLAAQAGVRYSLENPYAYADSNLIGYLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG K FS D +P S Y+ATK S++ + ++ H Y Sbjct: 115 ----KNHVQHLVYASSSSVYGLNAKVPFSTSDTVDHPVSLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAIT-RMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T ++I+G + + +G RD+ +++D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKIIDGHTIDINNNGDMWRDFTHIDDIVEGIIR 229 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ + + YN+G + ID V I L + K++ Sbjct: 230 IVDVLPVKDDTWTVESGTSASSSAPYKIYNVGHGSPINLIDFVKAIESELGIIAKKNFRG 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + PG + D+ + G+ P+ ++ G+ + + WY D Sbjct: 290 MQ--------PGDVYQTYADTQDLFDATGYKPKVTLKEGVAEFITWYRD 330 >gi|47569368|ref|ZP_00240051.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] gi|52140299|ref|YP_086530.1| UDP-glucose 4-epimerase [Bacillus cereus E33L] gi|196039539|ref|ZP_03106844.1| UDP-glucose 4-epimerase [Bacillus cereus NVH0597-99] gi|218906440|ref|YP_002454274.1| UDP-glucose 4-epimerase [Bacillus cereus AH820] gi|225867238|ref|YP_002752616.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB102] gi|228917870|ref|ZP_04081407.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228936556|ref|ZP_04099352.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948984|ref|ZP_04111257.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228988486|ref|ZP_04148576.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158825|ref|ZP_04286883.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 4342] gi|47553956|gb|EAL12324.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] gi|51973768|gb|AAU15318.1| UDP-glucose 4-epimerase [Bacillus cereus E33L] gi|196029699|gb|EDX68301.1| UDP-glucose 4-epimerase [Bacillus cereus NVH0597-99] gi|218534873|gb|ACK87271.1| UDP-glucose 4-epimerase [Bacillus cereus AH820] gi|225786325|gb|ACO26542.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB102] gi|228624809|gb|EEK81578.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 4342] gi|228771254|gb|EEM19730.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228810740|gb|EEM57088.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823144|gb|EEM68980.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228841806|gb|EEM86916.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|297625069|ref|YP_003706503.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297166249|gb|ADI15960.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 305 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 43/330 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTG GF+G L R+L +L Y +L+E++ S+ F + +D+ D Sbjct: 3 RALVTGAGGFVGPYLARHL-----------RELGYEVWGTALREVASSD-FQSVPLDVRD 50 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R+ ++E QPD I + A + GA F N+ GT +LE R + + Sbjct: 51 AARVRAVVRELQPDEIYHLAGVTRPASE--GAAAFYAVNLGGTLNVLEAAREVRAAV--- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 L + + VYG+ +G SE P P + Y A+KAS++ L + + G+ V+ Sbjct: 106 -------LVVGSAYVYGA-QRGPLSERAPLQPVNHYGASKASAELAALPYALS-GMRVVR 156 Query: 182 SNCSNNYGPYHFPEKLIPLAITRM--IEGSH---VFLYGDGQNVRDWLYVEDHVRALYLV 236 + N+ GP P+ L+P + ++ IE V G+ VRD+ V D VRA + Sbjct: 157 ARPFNHVGPGQSPDFLLPTLVQQLARIEAGRAEPVIKLGNLDAVRDFTDVRDIVRAYPKL 216 Query: 237 LKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L +G G YN+ G + R+ ++V E + L TE R R Sbjct: 217 LHEGDNGGVYNLASGRGVSVRELAELVLERAEVTVRL------ETEAARV---RASDIPE 267 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D+++ + +GW P +E+ L + + Sbjct: 268 LVGDATRAREAVGWAPSIPLEATLEAMLAF 297 >gi|262040061|ref|ZP_06013321.1| UDP-glucuronate 5'-epimerase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042595|gb|EEW43606.1| UDP-glucuronate 5'-epimerase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 334 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGYHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFDRVIHLAAQAGVRYSLENPYAYADANMMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS +D +P S Y+ATK +++ Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTQDSVDHPVSLYAATKKANELTAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ ++++ I L +AL Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSP---VELMDYITALEEALGM 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + I +PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 282 EAQKNMMPI-----QPGDVLDTSADTQPLYDLVGFKPQTSVKDGVKNFVEWYKD 330 >gi|239933063|ref|ZP_04690016.1| nucleotide-sugar dehydratase [Streptomyces ghanaensis ATCC 14672] gi|291441413|ref|ZP_06580803.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC 14672] gi|291344308|gb|EFE71264.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC 14672] Length = 320 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 137/329 (41%), Gaps = 35/329 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ D V +D + G ++ + + F+ ++ D+ + Sbjct: 13 VVTGGAGFVGSHLCAALL-DAGAAVTCVDDFS-TGRPENVSPLLERPGFTLVRADVAEEL 70 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +R PD +++FA+ + + + T +GT + L + Sbjct: 71 PVRR-----PPDLVLHFASPASPADYLRLPLHTMETGSLGT----------RNALRLARS 115 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST EVYG + +E P P S Y K + L A T+G Sbjct: 116 AGARFVLASTSEVYGDPQQNPQNERYWGNVNPVGPRSVYDEAKRFGEALTTAHAETHGTD 175 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P + + + G + + GDG+ R YV+D V + Sbjct: 176 TCIVRLFNTYGPRMRGHDGRAVPTFVRQALAGEPLTVTGDGRQTRSLCYVDDTVAGVLAA 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY-A 295 G G NIG E +D L L+ + IRF+E RP D Sbjct: 236 AAHGMRGP-VNIGNPGEITMLD--------LARLVVRLAGSESRIRFVE-RPVDDPAVRC 285 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++GW P+ + E GL +T+ W+ Sbjct: 286 PDITLALDKLGWEPEVDAEEGLRRTIAWF 314 >gi|301056730|ref|YP_003794941.1| UDP-glucose 4-epimerase [Bacillus anthracis CI] gi|300378899|gb|ADK07803.1| UDP-glucose 4-epimerase [Bacillus cereus biovar anthracis str. CI] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D NL + E + + F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVD------NLQTGHEGAITEGAKFYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEI 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|324329209|gb|ADY24469.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKRLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYHTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|229000009|ref|ZP_04159580.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] gi|228759693|gb|EEM08668.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] Length = 342 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 54/343 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ ++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILVTGGAGYIGSHTCVELLNN-GYDIIVVDNLSNSSVESLNRVKEITGKQ-FKFYEEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ I KE +A+++FA V S+ + NI T IL C Sbjct: 59 LLNRDAIDVIFKENTIEAVIHFAGLKAVGESVAIPLTYYHNNITSTLIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 K + + + S+ VYG + +E+ P N ++PY TK A S++ Sbjct: 110 VMQKHNVKKMIFSSSATVYGLPETSPITEEFPLNATNPYGQTKLMIEQMMRDVVVADSEW 169 Query: 167 --LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYG 215 ++L + + +G ++ S G P P L+P +A+ ++ E S + + Sbjct: 170 SVVLLRYFNPFG-----AHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTK 224 Query: 216 DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V D HV+AL VL + + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLANGHVKALEKVLHTTGV-DTYNLGTGTGYSVLEMVQAFEKVSGKSV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P + E RPG D+SK K E+GW + +E Sbjct: 284 P--------YKITERRPGDVAVCFADASKAKRELGWEAKRGLE 318 >gi|228930267|ref|ZP_04093275.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229124770|ref|ZP_04253950.1| UDP-glucose 4-epimerase [Bacillus cereus 95/8201] gi|228658747|gb|EEL14407.1| UDP-glucose 4-epimerase [Bacillus cereus 95/8201] gi|228829408|gb|EEM75037.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|260460167|ref|ZP_05808419.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259033812|gb|EEW35071.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 344 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 84/353 (23%), Positives = 153/353 (43%), Gaps = 46/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSN--L 51 M+++VTG AGFIG + R L+ + +V+ +D + L L E S+S Sbjct: 1 MKVLVTGAAGFIGYHVARRLL-ERGDEVVGVDSINDYYDPRLKQARLRLLAEASRSTNAG 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F+ ++ DR + E D +++ AA++ V S+ ++ +NI+ +LE Sbjct: 60 YHFIHGNLADRTVVDGCFAEHAFDRVIHLAAQAGVRYSLENPRAYVESNIVAFTNMLEAC 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R + + ST VYG+ FSE P + P Y+ATK +++ + + Sbjct: 120 R-------HSRVGHLTY--ASTSSVYGANTDMPFSEHRPADHPLQFYAATKRANELMAHS 170 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H +G+P YGP+ P+ + L ++ G V L+ +G + RD+ YVED Sbjct: 171 YSHLFGLPTTGLRFFTVYGPWGRPDMALFLFTRSILAGEPVKLFNNGNHTRDFTYVEDIA 230 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + +NIG NN + + + L +AL Sbjct: 231 EGVVRASDSPAAANPAWDSGHPDPATSSAPWRIFNIGNNNP---VKLAAYVEALENALGR 287 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 K+ ++ F+ + G D+S ++ +G+ P ++ G+ + V WYL Sbjct: 288 KA-----IVEFLPLQAGDVPDTFADTSALQQAVGYRPGTSVSEGVGRFVEWYL 335 >gi|206976932|ref|ZP_03237834.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] gi|206744898|gb|EDZ56303.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYHTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|104782404|ref|YP_608902.1| UDP-glucuronate 5'-epimerase [Pseudomonas entomophila L48] gi|95111391|emb|CAK16111.1| UDP-glucuronate 5'-epimerase [Pseudomonas entomophila L48] Length = 336 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 36/341 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +++TG AGFIG L R L + ++V+ ID L Y+ L LK++++ F+ Sbjct: 1 MPVLITGAAGFIGFHLARRLCQE-GLEVVGIDNLNAYYSVELKHARLKQLAEWPNLRFVP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D++ + +++ AA++ V S+ + +N++G +LE R Sbjct: 60 LDIADQDALLQLFAAHAFTEVIHLAAQAGVRYSLDNPGVYGQSNLVGFLNMLEACR---- 115 Query: 117 CLSQDKKDQFR---FLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 Q+R + S+ VYG+ K F ED P S Y+A+K +++ + ++ Sbjct: 116 --------QYRPRHLVYASSSSVYGANAKLPFCIEDPVEQPVSLYAASKRANELMAHSYA 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED---H 229 H Y IP+ YGP+ P+ + M+EG + LY G+ RD+ Y++D Sbjct: 168 HLYQIPMTGLRFFTVYGPWGRPDMALFKFTQAMLEGRPIDLYNHGRMGRDFTYIDDIVES 227 Query: 230 VRALYLVLKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 +R L + K G+ +NIG + ++++ + L DAL K+ + ++ Sbjct: 228 IRRLRVKPPKASEGQPPWQLFNIGRG---EPVELLSFVECLEDALGIKAQRN-----YLP 279 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG + D S + I + P ++E G+ V WY D Sbjct: 280 FQPGDVHQTWADVSSLAHWIDFSPSTSLEHGVRAFVGWYRD 320 >gi|22298743|ref|NP_681990.1| nucleotide sugar epimerase [Thermosynechococcus elongatus BP-1] gi|22294924|dbj|BAC08752.1| nucleotide sugar epimerase [Thermosynechococcus elongatus BP-1] Length = 338 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 50/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS-----LKEISQSNLFS 53 M ++VTG AGFIG L+ +V+ +D L Y NL L SQ F Sbjct: 1 MDVLVTGVAGFIGHGAALALLRRGD-RVIGLDNLNDYYDVNLKKSRLEHLNISSQPGQFI 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++D+ DR + +F P +++ AA++ V S+ +I +NI+G +LE R Sbjct: 60 FRKIDLVDRLGVNQLFADFSPQKVIHLAAQAGVRYSLENPFAYIDSNIVGFLHILEACR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 + + + S+ VYG+ K FS D +P S Y+ATK +++ + + Sbjct: 119 ------HHRVEHLVY--ASSSSVYGANKKLPFSVHDNVDHPLSLYAATKKANELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDH 229 H Y IP YGP+ P+ + TR I E VF YG ++ RD+ Y++D Sbjct: 171 HLYNIPTTGLRFFTVYGPWGRPDMAL-FKFTRAILNNEPLPVFNYG--KHRRDFTYIDDI 227 Query: 230 VRALYLVLKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + VL + GE YNIG + + I+++ I L + L Sbjct: 228 VEGILRVLDRPAAPNPAWCGETPDPATSLAPWRVYNIGAH---RPIELLRYIELLEEYLG 284 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ LI F+ +PG D + +K + G+ P +E G+ + V WY D Sbjct: 285 KKA-----LITFLPLQPGDVPDTYADVTALKEDTGYEPITPVEIGVQRFVEWYRD 334 >gi|229164201|ref|ZP_04292136.1| UDP-glucose 4-epimerase [Bacillus cereus R309803] gi|228619318|gb|EEK76209.1| UDP-glucose 4-epimerase [Bacillus cereus R309803] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGEDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|75760496|ref|ZP_00740534.1| UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492027|gb|EAO55205.1| UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 340 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 165/361 (45%), Gaps = 50/361 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG------DG 217 LL ++ S G P P L+P +A+ ++ E S ++G DG Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELS---VFGNDYPTRDG 226 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV+AL VL + + YN+G V E+ + + K Sbjct: 227 TGVRDYIHVVDLANGHVKALEKVLSTTGV-DAYNLGTGMGYS----VLEMVEAFEKVSGK 281 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 H + E RPG D+SK K E+GW + +E + W +N ++ Sbjct: 282 KVPH----KITERRPGDVAVCFADASKAKRELGWEAKRGLEEMCADSWRWQSENKTGYQK 337 Query: 334 L 334 + Sbjct: 338 V 338 >gi|293446387|ref|ZP_06662809.1| NAD-dependent epimerase/dehydratase [Escherichia coli B088] gi|291323217|gb|EFE62645.1| NAD-dependent epimerase/dehydratase [Escherichia coli B088] gi|323948411|gb|EGB44395.1| NAD dependent epimerase/dehydratase [Escherichia coli H120] gi|324119058|gb|EGC12947.1| NAD dependent epimerase/dehydratase [Escherichia coli E1167] Length = 334 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 160/346 (46%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ QV+ ID L Y NL + ++ + + FSF ++ Sbjct: 1 MKFLVTGAAGFIGFYVSKRLLA-AGHQVVGIDNLNDYYDVNLKQARLDLLKHDNFSFYKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + + D ++N AA++ V S+ + + N+IG +LE R Sbjct: 60 DLADREKMAALFVDERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 115 ----HNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYS 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL--- 233 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFTYIDDIAEAIIRL 230 Query: 234 ---------YLVLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + ++ G YNIG ++ ++++ I L +AL ++ + Sbjct: 231 QDVIPEKDPHWAVETGSPATSSAPYRVYNIGNSSP---VELMDYINALEEALGIEANKNM 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ PG + D+ + IG+ P+ +++ G+ V WY Sbjct: 288 MPLQ-----PGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWY 328 >gi|302874842|ref|YP_003843475.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307690538|ref|ZP_07632984.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302577699|gb|ADL51711.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 312 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 34/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVD 58 M ++VTGGAGFIG + + L D + ++D L + +++++K++ Q N +F++ Sbjct: 1 MNILVTGGAGFIGRWVVKRLTED-NHNIWILDNLANS-SIDNIKDL-QFNYPNITFIEGS 57 Query: 59 ICDRECIRSA-LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I D + + + +F D + AA +V SI ++IGTF +L++ ++ Sbjct: 58 IMDTNLLETLFINKF--DICYHLAASINVQDSIDDPKTTFENDVIGTFNVLQQCKI---- 111 Query: 118 LSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + +F+ +ST VY +L+ SE P P+SPY+A K + + L L++ + YG Sbjct: 112 ------NNTKFVYMSTCMVYSKALNIEGISESHPTCPASPYAAAKLAGENLALSYYYAYG 165 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +P + N YGPY +I + I + + + +YGDG+ RD+LYV D Sbjct: 166 LPTTVLRPFNTYGPYQKQNSEGGVISIFIDKKLMNKPLAIYGDGKQTRDFLYVTDCAD-- 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHD- 291 V++ G E+ N N +DI + L T I+++ P + Sbjct: 224 -FVVEAGY-SEKTNGKIVNAGSGVDIS------ITELAKTIAGETGTIKYVTHIHPQSEI 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKT 320 ++ DS K +GW P+ ++ G++KT Sbjct: 276 QKLLCDSRYSKKILGWSPKVSLVEGISKT 304 >gi|206580708|ref|YP_002237523.1| putative uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae 342] gi|290508647|ref|ZP_06548018.1| uge; uridine diphosphate galacturonate 4-epimerase [Klebsiella sp. 1_1_55] gi|206569766|gb|ACI11542.1| putative uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae 342] gi|289778041|gb|EFD86038.1| uge; uridine diphosphate galacturonate 4-epimerase [Klebsiella sp. 1_1_55] Length = 334 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFAAEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y IP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYSIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ + +D + + L Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGMEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ + +PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 285 KN--------MMPIQPGDVLDTSADTQPLYDLVGFKPQTSVKEGVKNFVEWYKD 330 >gi|85709754|ref|ZP_01040819.1| hypothetical protein NAP1_12753 [Erythrobacter sp. NAP1] gi|85688464|gb|EAQ28468.1| hypothetical protein NAP1_12753 [Erythrobacter sp. NAP1] Length = 337 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 54/354 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVD 58 +++TG AGFIG L + L+++ +V+ D +T Y L + + Q+ FS Sbjct: 4 VLITGSAGFIGYHLAQLLLDE-GFRVVGYDGMTDYYEVALKERRHQMLLQNANFSCKVGM 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E + S + +PDAI++ AA++ V S+ ++ N++G F ++E C Sbjct: 63 LEDFEALHSLAMDAKPDAIIHLAAQAGVRYSLENPRAYVDANLVGAFNVME-------CA 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAW 171 + D + ST VYG+ +EDMP+ +P + Y+ATK +++ + ++ Sbjct: 116 RELGVDHL--MMASTSSVYGA------NEDMPFAEREKTDHPLTLYAATKKANEAMAHSY 167 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + +P + YGP+ P+ + ++EG + +Y +G+ RD+ YV D VR Sbjct: 168 AHLWNLPTTMFRFFTVYGPWGRPDMALFKFTRGILEGKPIDIYNEGEMYRDFTYVTDLVR 227 Query: 232 ALYLVLKKG--RIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + L+L + R R NIG +++ + +D V I Sbjct: 228 GIRLLLDQPPVRPDSRDDITEWDSLSPAAPWRVANIGNSDKVRLMDFV--------EAIE 279 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ + G D+ +K G+ P+ ++ +G+ V WY D Sbjct: 280 AECGCKAVKNFMPMQKGDVPATWADARLLKELTGYAPETDIRTGVKHFVAWYRD 333 >gi|331006201|ref|ZP_08329524.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium IMCC1989] gi|330419999|gb|EGG94342.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium IMCC1989] Length = 338 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 156/350 (44%), Gaps = 44/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS-----LKEISQSNLFS 53 M+++VTG AGFIGS + + L+ V+ ID L Y NL + + S FS Sbjct: 1 MKVLVTGAAGFIGSHVTQVLLARGD-DVVGIDNLNSYYDVNLKEARLEWIADTPASGDFS 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++D+ D+ + + + D +V+ AA++ V SI E+I +N++G +LE R Sbjct: 60 FHKMDLVDQTAVDALFVNEKFDKVVHLAAQAGVRYSIEAPREYIESNVMGFTNILEACR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 + S+ VYG+ + FS +D +P S Y+ATK +++ + + Sbjct: 119 --------HNSIQHLVYASSSSVYGANESIPFSGKDNVDHPVSLYAATKKANELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H YG P YGP+ P+ L ++ G + ++ G++ RD+ Y++D V Sbjct: 171 HLYGFPSTGLRFFTVYGPWGRPDMSPFLFADAIVNGKPLKVFNYGKHRRDFTYIDDIVEG 230 Query: 233 LYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + VL + + YNIG +N +D + L+ + K+ Sbjct: 231 VVRVLDVNAVPNKKWSGMTPDPSSSKAPWKVYNIGCSNPVALLDYITT----LETVFGKT 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + EL+ +PG D + ++G+ P ++ G+ K WY Sbjct: 287 -AEKELLPL---QPGDVPDTYADVQALIDDVGYKPSTTLQEGVEKFAVWY 332 >gi|261418019|ref|YP_003251701.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|319767167|ref|YP_004132668.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] gi|261374476|gb|ACX77219.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|317112033|gb|ADU94525.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] Length = 328 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 148/332 (44%), Gaps = 54/332 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + +V+V+D L +E + F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGE-RVVVVDNLQ-----TGHREAVHPDAV-FCQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R ++ +AI++FAA S V S+ ++ N+ GT +LLE R Sbjct: 55 DFLREVFRQHDIEAIIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMR---------- 104 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 105 --EFGVKQIVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRS 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + ++++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTTIGEDHNPETHLIPLILKVPLGQREEIYIFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A +L L+K R G + YN+G N GF + +I + H Sbjct: 223 HVLDLVNAHWLALEKLRSGADSDVYNLGNGN-----------GFSVKEVIEAARQVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + R G R S K K E+GW P+ Sbjct: 272 IPARVVARRLGDPARLVASSEKAKRELGWEPK 303 >gi|212712593|ref|ZP_03320721.1| hypothetical protein PROVALCAL_03688 [Providencia alcalifaciens DSM 30120] gi|212684809|gb|EEB44337.1| hypothetical protein PROVALCAL_03688 [Providencia alcalifaciens DSM 30120] Length = 333 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 150/345 (43%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG LC+ L+ + +V+ ID + Y L L + Q F F+ Sbjct: 1 MKYLVTGSAGFIGFRLCQRLLENGH-EVVGIDNMNAYYDQGLKQSRLHILEQYPQFRFIP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DRE + + D +++ AA++ V S+ + +N+ G +LE R Sbjct: 60 LDITDREKVLVLCTQENFDRVIHLAAQAGVRYSLQNPFAYADSNLNGHLAILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 Q K + S+ VYG DK F+ DMP + P S Y+ATK +++ + ++ H Y Sbjct: 116 ---QAKVKHLVY--ASSSSVYGVTDKMPFTTDMPTDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y +G RD+ +++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEPIDVYNNGNLSRDFTFIDDIVEGVIR 230 Query: 236 V----------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + + YNIG K ID + + + K+ Sbjct: 231 ISDIIPQADPQNHSDSPAQSSAPYRIYNIGNGQPVKLIDFI--------SALEKALGKEA 282 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ + G D+ + + G+ P ++E G+ V WY Sbjct: 283 IKNFLPMQAGDVYTTWADTEDLFNVTGYRPHVSIEQGVQAFVDWY 327 >gi|315178472|gb|ADT85386.1| nucleotide sugar epimerase [Vibrio furnissii NCTC 11218] Length = 336 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGSA+ L + V+ ID L Y L + E + FSF+++ Sbjct: 3 MKYLVTGAAGFIGSAVIERLCAEGH-DVVGIDNLNDYYDVALKDARLERAAHERFSFIEM 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DRE I Q D +++ AA++ V SI + +N++G +LE C Sbjct: 62 DIADREAIADLFAVEQFDKVIHLAAQAGVRYSIDNPMSYADSNLVGHLTILE------GC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG K F + D +P S Y+ATK S++ + + H YG Sbjct: 116 RHHKIK---HLVYASSSSVYGLNRKTPFNTSDSVDHPVSLYAATKKSNELMAHTYSHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + +++G + +Y +G +RD+ Y++D V + + Sbjct: 173 VPTTGLRFFTVYGPWGRPDMALFKFTKAILKGDAIDVYNNGDMMRDFTYIDDIVEGILRI 232 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG + K +D + + L K+ Sbjct: 233 KDVVPEPNAEWSVEAGSPATSSAPYRVYNIGHGSPVKLMDYIKALESALGIEAKKN---- 288 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + + + PQ +E G+ V WY Sbjct: 289 ----MLPMQPGDVYVTYADTQDLFNATQYKPQMGVEQGVANFVKWY 330 >gi|260770732|ref|ZP_05879662.1| putative nucleotide sugar epimerase [Vibrio furnissii CIP 102972] gi|260614313|gb|EEX39502.1| putative nucleotide sugar epimerase [Vibrio furnissii CIP 102972] Length = 336 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGSA+ L + V+ ID L Y L + E + FSF+++ Sbjct: 3 MKYLVTGAAGFIGSAVIERLCAEGH-DVVGIDNLNDYYDVALKDARLERAAHERFSFIEM 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DRE I Q D +++ AA++ V SI + +N++G +LE C Sbjct: 62 DIADREAIADLFAVEQFDKVIHLAAQAGVRYSIDNPMSYADSNLVGHLTILE------GC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG K F + D +P S Y+ATK S++ + + H YG Sbjct: 116 RHHKIK---HLVYASSSSVYGLNRKTPFNTSDSVDHPVSLYAATKKSNELMAHTYSHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + +++G + +Y +G +RD+ Y++D V + + Sbjct: 173 VPTTGLRFFTVYGPWGRPDMALFKFTKAILKGDAIDVYNNGDMMRDFTYIDDIVEGILRI 232 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG + K +D + + L K+ Sbjct: 233 KDVVPEPNAEWSVEAGSPATSSAPYCVYNIGHGSPVKLMDYIKALESALGIEAKKN---- 288 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + + + PQ +E G+ V WY Sbjct: 289 ----MLPMQPGDVYVTYADTQDLFNATQYKPQMGVEQGVANFVKWY 330 >gi|91773545|ref|YP_566237.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91712560|gb|ABE52487.1| nucleotide sugar dehydratase [Methanococcoides burtonii DSM 6242] Length = 330 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 86/343 (25%), Positives = 153/343 (44%), Gaps = 37/343 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN--SLKEISQSNLFSFLQV--- 57 ++VTG GFI S L LV + + + + N L E+++ +L ++V Sbjct: 8 VVVTGAGGFIASHLTEELVR----RGANVKAFVHYNSRNDWGLLELAEKDLLDKVEVISG 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + S K+ D + + AA + S + + ++ N+ GT +L+ +C Sbjct: 64 DVTDPFFVNSVTKD--TDIVFHLAALIGIPYSYVAPEHYVNVNVKGTLNVLQ------AC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L + + ST E YG+ + E P SPYSA+K +D + ++ ++ + Sbjct: 116 LDNGVG---KMVHTSTSETYGTAEYTPIDEKHPLKGQSPYSASKIGADKMAESYYRSFDL 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 PV N +GP +IP I++ + + + G VRD YV+D V V Sbjct: 173 PVATIRPFNTFGPRQSARAIIPTIISQALTRDEIHV-GSLTPVRDMTYVKDTVNGFIEVG 231 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDR 292 L + GE N+G + IG +L+ ++ E I IE+ RPG Sbjct: 232 LSERSSGETINVGTGSGAT-------IGVILEKIL--KILGKEDIPVIEEQNRVRPGKSE 282 Query: 293 RYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + D+SK K + W P+ ++++GL +T+ W + ++P Sbjct: 283 VMELICDNSKAKDLLNWSPEYSLDNGLKETIEWMQEYTKLYKP 325 >gi|331000838|ref|ZP_08324484.1| NAD dependent epimerase/dehydratase family protein [Parasutterella excrementihominis YIT 11859] gi|329570366|gb|EGG52099.1| NAD dependent epimerase/dehydratase family protein [Parasutterella excrementihominis YIT 11859] Length = 339 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 101/340 (29%), Positives = 150/340 (44%), Gaps = 48/340 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R V GGAGFIG+ L L+ D + QV D L+ GNL ++ E+ Q + SF + DI + Sbjct: 17 RSAVFGGAGFIGTNLVYQLIEDGQ-QVFNFDNLSGLGNLLNVAELMQQSRHSFARCDISN 75 Query: 62 RECIRSALKEFQPDAI--VNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E IR AL D I VD S+ D F T +T + WS Sbjct: 76 PEEIRQALLMAAADTIYFCITPKNPQVDSSL---DNFRT---------FFDTVVDWSKGM 123 Query: 120 QDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K + +S ++ GS K ++S K DY + G+P Sbjct: 124 SDAKLHKIVVVVSEHYKLLGSYAK-MYS-----------GLLKLLDDY------ASEGLP 165 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + +GP+ P+ I + I R IEG + + + V D +YV+D V A+ LV K Sbjct: 166 ISSLLVPPAFGPFQQPDSPISMIIYRAIEGETIPVVNSEEKVSDLVYVKDVVDAIVLVEK 225 Query: 239 KGRIGERYNIGGNNER----KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G+I Y++G + D++ E L +AL P + LI +E P Sbjct: 226 SGKISGHYHLGAATPSMSNLEAADVICE--SLNEALPPPVGRYQALIEEVETAP-----I 278 Query: 295 AIDSSKIKS---EIGWFPQENMESGLNKTVCWYLDNNWWW 331 D SK +S +G + +++ GL KTV WYL+N W+ Sbjct: 279 TSDISKDESTLAPLGLPSKTSLKEGLKKTVSWYLNNPRWY 318 >gi|220924394|ref|YP_002499696.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219949001|gb|ACL59393.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 338 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL----FSFLQ 56 MR +VTG AGFIG L R L+ V+ +D LT ++ +LK S L F+ Sbjct: 1 MRCLVTGTAGFIGFHLARRLLAAGH-AVVGVDGLTDYYDV-ALKRARLSALAGPGFANHS 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + + E +PD +V+ AA++ V S+ + ++ N++GTF +LE R Sbjct: 59 FMLEEPGAFAALMGEVKPDIVVHLAAQAGVRYSLENPESYVAANMVGTFQVLEGLR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L ST VYG + F E D P + Y+A+K + + + A+ H + Sbjct: 115 -----QHPVRHALMASTSSVYGGNPRTPFRETDTVATPLTIYAASKIAGEAMAHAYAHLW 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + L +++ G V ++ G+ VRD+ Y++D V ++ Sbjct: 170 RIPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPVEVFDHGRAVRDFTYIDDLVESIVR 229 Query: 236 VLKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +++ E NIGG +G +LD L ++ + Sbjct: 230 LIEVPPGPEPVSPADTLSPVAPFRIVNIGGGAP-------VTVGAMLDVL--EAALGMKA 280 Query: 281 IRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + D PG R ++ ++ IG+ P + G+ V WY ++ Sbjct: 281 TRLLRDLPPGDVSRTEAETRLLEDLIGYVPATPVTVGIPAFVAWYREH 328 >gi|325295553|ref|YP_004282067.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066001|gb|ADY74008.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 327 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 54/334 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M+++VTGGAG+IGS + + L + +VLV+D L+ K ++ L+ L V D+ Sbjct: 1 MKILVTGGAGYIGSHVVKAL-GEKGYKVLVVDNLS--------KGHKEAVLYGKLVVADL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + KEF+PDA+++FAA V +S+ ++ N + T LLE + Sbjct: 52 EDKNTLDVIFKEFRPDAVMHFAAFIEVAQSLREPLKYYKNNTVNTINLLE-------VML 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ ++F F ST VYG+ +K E P P +PY +KA + ++ + +YG+ Sbjct: 105 KNGVNKFIFS--STAAVYGNPEKVPIPEIEPIKPINPYGQSKAFVEKVLQDFDKSYGLKY 162 Query: 180 LL--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 + ++ G H PE LIPL + T E + ++G DG +RD+ Sbjct: 163 VSLRYFNAAGADPEGRIGESHDPETHLIPLILKTAKGEKESIKIFGTDYPTPDGTCIRDY 222 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V+D H+ AL +L G E +N G + GF + +I + T Sbjct: 223 IHVDDLAEAHILALEYLLNGGS-SEVFNCG-----------YGHGFSVREVIDTARKVTG 270 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + E RPG DSSK++ + W P+ Sbjct: 271 IDFKVEETERRPGDPAILVADSSKLRKVLDWKPK 304 >gi|255038344|ref|YP_003088965.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] gi|254951100|gb|ACT95800.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] Length = 339 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 84/354 (23%), Positives = 148/354 (41%), Gaps = 42/354 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGG GF+GS L ++ ++ V D L G+ +L + Q F F DI Sbjct: 1 MRYLITGGCGFLGSNLGAEVLKRGD-ELFVFDNLFRYGSEQNLAWLRQQGDFKFYHADIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + A+++ +PD + + A + + S+ N++G LLE R + Sbjct: 60 SYNDVEFAIRDAKPDVVFHLAGQVAMTTSLANPRLDFEINVLGGNNLLESVRKY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 + ST++VYG D + F ED+P SPY +K ++ Sbjct: 114 --APEAIVTYSSTNKVYGDFDWVNFQETPTRFEAQNFENGFKEDIPLQFQSPYGCSKGAT 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---------KLIPLAITRMIEGSHVFLYG 215 D +L + +G+ ++ S+ +G F + I + + G Sbjct: 172 DQYMLDYAKMFGLKTIVFRHSSIFGGRQFSTFDQGWVGWFVRQAVDIKNGVLKDKFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKG--RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +G+ VRD L+ +D + + + +GE +NIGG E N + E+ +L+ + Sbjct: 232 NGKQVRDLLFADDLINCYFSAISNTDQTVGEAFNIGGGME--NSLSLLELFKILEGKLGV 289 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S+ EL R + + D+SK S GW P + G++K + W N Sbjct: 290 EMSYEELPW----RQSDQKVFVADTSKAYSRFGWAPLISKNEGIDKMIEWVSGN 339 >gi|237752575|ref|ZP_04583055.1| NAD-dependent epimerase/dehydratase [Helicobacter winghamensis ATCC BAA-430] gi|229376064|gb|EEO26155.1| NAD-dependent epimerase/dehydratase [Helicobacter winghamensis ATCC BAA-430] Length = 350 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 66/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M+++VTG AGFIGS L + L+ D++I+ ++ A N + Sbjct: 1 MKILVTGTAGFIGSFLAKRLLERGDEVVGLDCINDYYDVRIKYGRLENAGIAQNAIAYNA 60 Query: 46 ISQSNLFS---FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 + QS + F+++++ DRE + ++ + D + N AA++ V S++ ++ +NI+ Sbjct: 61 LVQSEKYPNYRFIKLNLEDRENLFKLFEKEKFDKVCNLAAQAGVRYSLVNPYAYVDSNIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSS 155 G +LE +C + K S+ VYG +E+MP+ +P S Sbjct: 121 GFVNILE------ACRHHNIK---HLAYASSSSVYG------LNENMPFSTSDNVDHPIS 165 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + + + +G+P YGP+ P+ + L ++EG + ++ Sbjct: 166 LYAASKKSNELMAHTYSYLFGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFN 225 Query: 216 DGQNVRDWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNNERKNI 257 G+ +RD+ YV+D V + V+ G+ + YNIG NN + + Sbjct: 226 HGEMLRDFTYVDDIVEGVVRVIDNNAEPNAEWSGKAPDPHSSKAPYKIYNIGNNNPVRLM 285 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + I K T + +PG + + EI + P ++E+G+ Sbjct: 286 DFI--------EAIEKELGITAQKNMLPLQPGDVPATYANVDDLIKEIDYKPNTSIETGI 337 Query: 318 NKTVCWY 324 + WY Sbjct: 338 KNFIAWY 344 >gi|305431508|ref|ZP_07400685.1| GDP-mannose 4,6-dehydratase [Campylobacter coli JV20] gi|304445430|gb|EFM38066.1| GDP-mannose 4,6-dehydratase [Campylobacter coli JV20] Length = 343 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ + +PD I + AA+S+ S E + TNIIGT +LE RL ++D Sbjct: 66 YSSIQKLFESKRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRL---LKAKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +ED ++ +SPYS +K +DYL +G YGI Sbjct: 123 GYDPVVHV-CSSSEVYGRAKVGVKLNEDTTFHGASPYSISKIGTDYLGRFYGEAYGIKTY 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVVKVGNLSSVRTFQDCRDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG + GE +NI G F++ ++D L+ +S + I+ +D Sbjct: 241 LLSLESEKGNVPCGEAFNIAGEE-------AFKLPEVIDILL--GFSTRKDIKVEQDEER 291 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 292 LRPIDADYQMFDNTKIKSYIDWKPE 316 >gi|317048401|ref|YP_004116049.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b] gi|316950018|gb|ADU69493.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b] Length = 335 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+ QV+ ID L Y +L L +I+Q FSF + Sbjct: 1 MKFLVTGAAGFIGFHVSQRLLA-AGHQVVGIDNLNDYYDVSLKQARLDQIAQHPAFSFSK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I S ++ D +++ A++ V SI + N+IG +LE R Sbjct: 60 MDLADRQAISSLFEQHGFDRVIHLGAQAGVRYSIENPHAYADANLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS +D +P S Y+ATK +++ + + H Y Sbjct: 116 -----HHKIGHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-- 233 +P YGP+ P+ + M+ G + +Y +GQ RD+ Y++D A+ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGERIDVYNNGQMKRDFTYIDDIAEAIVR 230 Query: 234 ----------YLVLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D + + L K+ Sbjct: 231 LQDVIPQPDEHWTVETGTPATSSAPYRVYNIGNSQPVSLMDYIKALENALGIEANKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D+ + I + PQ ++ G+ + V WY Sbjct: 288 -----LMPMQPGDVLETSADTQPLYDAINFRPQTSVADGVQEFVNWY 329 >gi|46198530|ref|YP_004197.1| UDP-glucose 4-epimerase, putative [Thermus thermophilus HB27] gi|46196152|gb|AAS80570.1| UDP-glucose 4-epimerase, putative [Thermus thermophilus HB27] Length = 309 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 41/331 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAGFIGS ++V DL ++V V+D L N K + F +VD+ Sbjct: 1 MLVTGGAGFIGS----HIVEDLLARGLEVAVLDNLATGKRENVPKGVP------FFRVDL 50 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E + A +EF+P + + AA++ V S+ ++ + L Sbjct: 51 RDKEGVERAFREFRPTHVSHQAAQASVKVSV-------EDPVLDFEVNLLGGLNLLEACR 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q ++ F + +YG + +G +E+ P P SPY+A+KA+ ++ + +G +YG+ Sbjct: 104 QYGVEKLVFAS-TGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLK 162 Query: 179 VLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHV 230 + N YGP P ++ + R+++G V LY GD VRD++YV D Sbjct: 163 WVSLRYGNVYGPRQDPYGEAGVVAIFAERILKGLPVTLYARKTPGDEGCVRDYVYVGDVA 222 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A L L + YN+G +++ + ++ ++ RPG Sbjct: 223 EAHALALFS--LEGIYNVGTGEGHTTREVLMAVA--------EAAGKAPEVQPAPPRPGD 272 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + K+ + GW P+ + G+ TV Sbjct: 273 LERSVLSPLKLMAH-GWRPKVGFQEGIRLTV 302 >gi|327538665|gb|EGF25317.1| Vi polysaccharide biosynthesis protein vipB/tviC [Rhodopirellula baltica WH47] Length = 332 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 33/333 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R +VTG AGFIGS + L+ D +V+ +D L+ + NL E Q + +F++ D Sbjct: 16 RCLVTGAAGFIGSQMVERLL-DAGAEVVALDNLSTGFKHNLTPFLEGPQRDRLTFVEGDA 74 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD---EFITTNIIGTFILLEETRLWWS 116 DR C++ +++ D I +FAA + V RS+ ++ TT+ + L + Sbjct: 75 ADRACVQRSVEGV--DHIFHFAAMASVPRSMREPGLCHDWTTTSTV---------ELLAA 123 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K R + ST VYG+ ED P SPY+A K SS+ + + Sbjct: 124 GSAAGVK---RLVLSSTSAVYGNSPYVAKREDDMPAPLSPYAAAKLSSENYCQVFQREFP 180 Query: 177 IPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I ++ N +GP P+ +IP ++ ++ G +YGDGQ RD+++V D A Sbjct: 181 IETVVLRYFNVFGPRQDPKSEYSAVIPRFVSMILSGERPVIYGDGQQSRDFVFVRDVANA 240 Query: 233 LYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G +N+G ++++ + LL+ I + R G Sbjct: 241 NMLAATVADAAGGIFNVGRGQRTTLLELLDTLRELLEGDIQPIHE--------PPRAGDV 292 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+++I+S +G+ P +M GL +++ +Y Sbjct: 293 RDSLADTNQIRSRLGFEPTVDMTEGLRQSIEYY 325 >gi|159900948|ref|YP_001547195.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893987|gb|ABX07067.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 317 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 142/339 (41%), Gaps = 43/339 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----------YAGNLNSLKEISQS 49 M +VTGGAGFIGS LC L+ + +V+ D AG L+ L Sbjct: 1 MTYLVTGGAGFIGSHLCETLLQRGE-RVIAFDNFNDYYSPERKRRNVAGLLDHLN----- 54 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F + D+ D + + ++ +P + + A ++ S+ + N+ G+ Sbjct: 55 --FVLWEGDLRDPASLLALFEQHRPSHVAHLAGMANPRYSLQYPALYSAVNVEGS----- 107 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 +W + + + F+Q ST VYG E P SPY+ATK +S+ L Sbjct: 108 -VNVWQAAIQYGIQ---AFVQASTSSVYGLAPTPWHEELATDRPLSPYAATKKASELLAY 163 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVED 228 + + IP + YGP P+ + + M + + LY G +V RDW YV+D Sbjct: 164 TFHYQTQIPTRVVRFFTVYGPKGRPDMTPTIFVEAMRKQEPIVLYNGGVDVYRDWTYVDD 223 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V + VL R + +N+G + +L + I + T L IE +P Sbjct: 224 IVSGVIAVLDSDRAFDIFNLGNSTP-----------VMLRSFIDTLQAITGLNAIIEAKP 272 Query: 289 GHDRRYAI---DSSKIKSEIGWFPQENMESGLNKTVCWY 324 I D+SK + +GW P ++E GL + WY Sbjct: 273 LSSADPPITFADTSKAQQLLGWKPTIDIEDGLERYWHWY 311 >gi|302671892|ref|YP_003831852.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] gi|302396365|gb|ADL35270.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] Length = 324 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 31/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS +C L+ D+ V +D L+ G++ +++ + F+F++ DI D Sbjct: 14 FLVTGGAGFIGSNICEALL-DMGYTVRCMDNLS-TGHIENIQPFMSNPRFTFIEKDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A K D ++N AA V RSI + NI GT ++E +R + Sbjct: 72 DACMEATKGV--DYVLNEAAWGSVPRSIEMPLLYEEINIRGTINMMEASR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ S+ VYG E N SPY+ TK + + + YG+ Sbjct: 121 NGVKKFVYASSSSVYGDSTILPKKEGQEGNVLSPYALTKKTDEEYGKLYKKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV----EDHVRALY 234 N +G P +IP + +++ G + GDG+ RD+ YV E ++RA Sbjct: 181 RYFNVFGRRQDPNGAYAAVIPKFLRQLMNGETPTINGDGKQSRDFTYVDNVIEGNLRA-- 238 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + GE YNIG ID+ L DAL E I F R G R Sbjct: 239 CLASSEAAGEAYNIGAGGREFLIDVYHH---LTDAL----GMDVEPI-FGPPRAGDIRDS 290 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK + +G+ P + ++G+ + WY +N Sbjct: 291 NADISKARQNLGYDPSYDFKAGIELAIEWYKEN 323 >gi|228924585|ref|ZP_04087780.1| NDP-sugar epimerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835080|gb|EEM80526.1| NDP-sugar epimerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 266 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 26/270 (9%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLE 109 F F++ DI + + + L++ D + + AA V RS G D ++T NI+ T LLE Sbjct: 5 FQFIREDILNTD-LSILLQDI--DVVYHLAAIPGV-RSSWGKDFQPYVTNNIMVTQQLLE 60 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + K D +F+ IST VYG G SED+ P SPY TK S ++L Sbjct: 61 ACK-------HIKLD--KFIHISTSSVYGE-KSGAVSEDLLPTPLSPYGVTKLSGEHLCH 110 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + + IP+++ YGP P+ I +++ + ++GDG RD+ Y++D Sbjct: 111 VYHKNFHIPIVILRYFTVYGPRQRPDMAFHRLIKQLLVDKPLTIFGDGTQTRDFTYIDDC 170 Query: 230 VRALYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 +R L KK IGE NIGG + +DI+ +++ K + F++ Sbjct: 171 IRGTVAALETKKNIIGEVINIGGKEQASILDII--------SMLEKISGKSATKNFLKSV 222 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 PG ++ D SK + + + P ++ GL Sbjct: 223 PGEPKQTWADISKASTLLQYSPTVSLSDGL 252 >gi|304394335|ref|ZP_07376258.1| UDP-glucuronic acid decarboxylase 1 [Ahrensia sp. R2A130] gi|303293775|gb|EFL88152.1| UDP-glucuronic acid decarboxylase 1 [Ahrensia sp. R2A130] Length = 366 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 39/333 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC+ L+++ V+ D + N L E++ ++ FS ++ D+ Sbjct: 47 ILVAGGAGFLGSHLCKRLLDEGHT-VICADNFQTGRSANVL-ELTTNSSFSVIRHDVI-- 102 Query: 63 ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 LK P D I N A + + + T + GT LL +++D Sbjct: 103 ----KPLKLAGPLDEIYNLACAASPPKYQQDPIHTMQTCVNGTLNLLN--------MARD 150 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K RF Q ST EVYG +G F PY P S Y K +++ L + Y Sbjct: 151 KGA--RFFQASTSEVYGDPVVHPQSEGYFGNVNPYGPRSCYDEGKRAAEALCHDFAERYD 208 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP + +++ I + + G + +YG G R + YV+D V + Sbjct: 209 VTVKVARIFNTYGPQMLADDGRVVSNFIVQALRGEPITIYGSGSQTRSFCYVDDLVDGIV 268 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIEDRPGHD 291 L+ G + N+G E F I L + +I + + SH ++ D P Sbjct: 269 KLIRSDGSVTTPVNLGNPVE-------FTIRQLAELVIEQTGTGSHLKMCTLPVDDPKQR 321 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK K + W P + G+ +T ++ Sbjct: 322 RP---DISKAKQTLNWEPSIMLAEGVRRTTAYF 351 >gi|332686326|ref|YP_004456100.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] gi|332370335|dbj|BAK21291.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] Length = 318 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 149/333 (44%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L K +V +ID L+ + + I +F++ + D Sbjct: 4 ILVTGGAGFIGSTLANKLSK--KNKVTIIDDLS----MGKIDNIQLHENITFIKGTVTDG 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +++ E + D I + AA + V S+ E N LLE + + + Sbjct: 58 HLMKTIFLETKFDYIFHLAAIASVADSVEHPIETHKVNFESVLQLLELIKNY-------Q 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D R + S+ VYG E+ P +PY+ K +++ VL + + Y IP Sbjct: 111 PDLKRLVFTSSAAVYGDEKSLPKREESVIRPLTPYAVDKFAAERYVLNYCNLYKIPTSAV 170 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIE-------GSHVF--LYGDGQNVRDWLYVEDHVRAL 233 N YGP P I+ M++ G V +YGDGQ RD+++V+D V+AL Sbjct: 171 RFFNVYGPNQNPNSPYSGVISIMMDCYKKILAGETVTFKMYGDGQQSRDFVFVDDVVQAL 230 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV +GE YN+ + +D++ LL +P I+F R G + Sbjct: 231 DLVANATESLGEVYNVATGCKTSLLDLIAIFDNLLSVKLP--------IKFESSRIGDIK 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D +KIK+ + + PQ + G+ K V + L Sbjct: 283 DSYADITKIKN-LNYQPQFCLYEGIKKYVTYEL 314 >gi|188580525|ref|YP_001923970.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179344023|gb|ACB79435.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 365 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D G ++L +++ F ++ D+ Sbjct: 22 VLVAGGAGFIGSHLVDALLA-RGARVVALDSF-LTGRRDNLAHLAREPRFELVEADVTGP 79 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L F D I N A + + T+++GT LLE + Sbjct: 80 LPV---LPRF--DRIFNLACAASPPHYQADPMHTMMTSVVGTHHLLERA----------Q 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 D RFLQ ST EVYG + +E P P + Y K S++ LV + + + Sbjct: 125 ADGARFLQASTSEVYGDPEVHPQTESYWGNVNPTGPRACYDEGKRSAETLVFDFERVHRL 184 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP + +++ + + + G + +YG+G+ R + Y D V L Sbjct: 185 DVRVARIFNTYGPRMRADDGRVVSNVVCQALAGEPITVYGNGEQTRSFCYAADLVDGLMR 244 Query: 236 VL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDR 292 ++ ++ G N+G E + L+D + + + + ++R D P + Sbjct: 245 LMDRETSPGGPVNLGNPRE-------MTVAELVDLVTRMTCTRSAVVRRPLPVDDP---Q 294 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D ++ + +GW PQ +E GL T+ W+ Sbjct: 295 RRRPDITRARDLLGWAPQVPLEQGLEATIAWF 326 >gi|24212751|ref|NP_710232.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|45655959|ref|YP_000045.1| dTDP-glucose 4-6-dehydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193392|gb|AAN47250.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|45599192|gb|AAS68682.1| dTDP-glucose 4-6-dehydratase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 312 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 154/335 (45%), Gaps = 38/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ + +V+ +D L + G +++++ + F F++ D+ D Sbjct: 5 RILITGGAGFIGSHLCERLLKEGN-EVICLDNL-HTGRKKNIQKLLNDSKFEFIRHDVTD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + A + I TN++G + L Sbjct: 63 P-------IKLEVDQIYNMACPASPVHYQSNAIKTIKTNVLG----------MMNMLGLA 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG+ + E P S Y K ++ L + + Sbjct: 106 KRVGARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHK 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P+ +++ I + ++ ++ LYGDG R + YV+D V + Sbjct: 166 VDIRVIRIFNTYGPRMLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIV 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDR 292 ++ N+G + E F + L + ++ ++ S ++++ +D P Sbjct: 226 RMMNTENFNGPVNLGNDGE-------FTVRELAELVLKETGSSSKIVHKPLPQDDPA--- 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D + K ++G+ P+ ++ G+ KT+ ++ +N Sbjct: 276 RRKPDLTLAKQQLGFEPKVSLVEGIRKTIEYFKNN 310 >gi|312137034|ref|YP_004004371.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] gi|311224753|gb|ADP77609.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] Length = 316 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 39/330 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGG GFIGS L L + +V VID G+ LK + N +++ Sbjct: 8 KIVITGGLGFIGSHLANELSKNN--EVTVIDN----GSTGDLKNLENEN------IEVIM 55 Query: 62 RECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ LK+ D + + AA + V RSI E N+ G+ +L L+ Sbjct: 56 KDINEVNLKKIFEDKDYVFHHAAIASVPRSIENPIECHKVNVTGSLKVL---------LA 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + + S+ VYG SED NP SPY+A+KASS+ + YG+ Sbjct: 107 ARDTDVKKVINASSSAVYGDNPNLPLSEDDSLNPLSPYAASKASSELYCKVFNEVYGLKT 166 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P +IP I +MI+ +YGDG RD++YV+D V+ Sbjct: 167 VSLRYFNVFGPKQNPHSQYAAVIPKFIYKMIKNEPPKIYGDGTQTRDFIYVKDVVKINIK 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V + G N+ E +++ +F I +LD + Y+ + RPG + Sbjct: 227 VAESNFTG-VLNV-ARGESISVNKLFRLIKEILDVEVEPIYT--------DPRPGDIKHS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S +KS++ + P N + L +T+ W+ Sbjct: 277 WADISLLKSKLKFKPG-NFKEQLKETIEWF 305 >gi|260461389|ref|ZP_05809637.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259032926|gb|EEW34189.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 431 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 35/333 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L D +V+ +D G + ++ + + F ++ DIC+ Sbjct: 13 VLVAGGAGFLGSHLCEALFRD-GYRVICVDNF-LTGRIENITSLIGQSRFRLIEQDICN- 69 Query: 63 ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L+ +P D I N A + R T +IGT LLE C Sbjct: 70 -----PLELGEPVDRIFNLACAASPPRYQADPIHTTRTCVIGTLNLLE----LAVC---- 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 D RFLQ ST EVYG ++ ED P + Y K +++ L + Sbjct: 117 --DDARFLQASTSEVYGDPEQHPQREDYLGHVNCTGPRACYDEGKRTAETLCFDYLRADM 174 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 V ++ N YGP P +++ + + +E + ++GDG+ R + YV D V L Sbjct: 175 ADVRVARIFNTYGPRMDPADGRIVSNLVMQALEKRPLTIFGDGRQTRSFCYVTDLVEGLL 234 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ + + N+G E +D+ G + + + + S + + ED P RR Sbjct: 235 RLMDIEPNPRQPINLGNPGEFTILDLA---GLVRE--LTGTRSPVKFLPLPEDDP---RR 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D ++ +S +GW P+ + GL +TV ++ D Sbjct: 287 RRPDIARARSLLGWSPKVPLRQGLLQTVIYFAD 319 >gi|15895435|ref|NP_348784.1| nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|15025160|gb|AAK80124.1|AE007717_1 Nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|325509581|gb|ADZ21217.1| Nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum EA 2018] Length = 332 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 31/340 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L++D V +D L+ G++ +++E N F F++ DI Sbjct: 1 MNILVTGGAGFIGRWVVKKLLDDGN-TVTALDNLS-NGSIENIEEFKGEN-FKFIEGDIK 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 +++ + ++ + D I + AA V SI ++ + +GTF +LE + Sbjct: 58 NKDDLDRIFED-KYDIIYHLAASIVVQESIDDPEKTFFNDTVGTFNILERAKKQMFGQHG 116 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W+ D+ + + +ST VY + E P SPY +K +++ +V Sbjct: 117 KMNGSIWNIDENDEVYPCKVVFMSTCMVYDISGETGIDEQHSVKPVSPYGGSKIAAENMV 176 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + + I+ + +YG G+ RD L+ Sbjct: 177 LSYFNAYKLPAVVIRPFNTYGPFQKSNGEGGVVSIFLKNFIDNKPINIYGSGKQTRDLLF 236 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+D + K + GE N G N DI L A S +H E I Sbjct: 237 VKDCADFVVNAGYKSEVDGEIINAGTGN-----DITINELANLIAGKKVSVNHVEHI--- 288 Query: 285 EDRPGHD-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 P + + + SK K+ +GW P +E G+ +T W Sbjct: 289 --HPQSEIMKLKCNYSKAKNLMGWEPHYTLEEGIAETKSW 326 >gi|251798141|ref|YP_003012872.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247545767|gb|ACT02786.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 302 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 29/323 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS L LV + V VID L+ N E ++DI Sbjct: 1 MKALVTGGAGFIGSHLTDALVQSGAV-VHVIDNLSTGFIHNVHPEAV------LHELDIN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E ++ +K+ +PD + + AA+ V S+ NI+GT RL +C Sbjct: 54 SDEALQ-IIKQVKPDIVFHMAAQVDVQCSVADPAFDSLVNIVGTI------RLMMAC--- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + + ST VYG +K SED P S Y +K + + + + YG+P Sbjct: 104 RQAEVGKLVFSSTSAVYGDANKERNSEDAVTAPISYYGLSKLTGENYIRLFHKMYGLPYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP ++ + + ++ +G + + G G RD++YV+D V+A + Sbjct: 164 ILRYSNVYGPRQNASGEGGVVSIFMNKLKQGHPLHVNGSGNQTRDFIYVQDVVQANLAAI 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G E NI R +I+ + + L+ + I + +RPG +D Sbjct: 224 HHGD-QETVNI-STGLRTSINNLIHMVKLI-------HGQNVDIAYGPERPGDIMDSCLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKT 320 ++K +GW P ++ GL++T Sbjct: 275 NTKANQLLGWRPASSLFEGLSQT 297 >gi|49481245|ref|YP_039254.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332801|gb|AAT63447.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 330 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTKENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|83594905|ref|YP_428657.1| UDP-glucuronate 5'-epimerase [Rhodospirillum rubrum ATCC 11170] gi|83577819|gb|ABC24370.1| UDP-glucuronate 5'-epimerase [Rhodospirillum rubrum ATCC 11170] Length = 335 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 163/357 (45%), Gaps = 46/357 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M +VTG AGFIGS + L+ + + QV+ ID T ++ LKE + L FS Sbjct: 1 MTTLVTGTAGFIGSHVALRLLQEGE-QVVGIDCYTPYYDVG-LKEARVARLKAFPGFSEH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ D + + + +P +++ AA++ V S+ ++ +N++GTF +LE R Sbjct: 59 RLDLADEAGVDAVFRAARPRRVIHLAAQAGVRYSVENPRAYLESNLMGTFSVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 K + ST VYG+ FSE P + P + Y+ATK +++ + ++ + Sbjct: 116 ------KTGVEHLVFASTSSVYGANKTQPFSEHQPADHPLTFYAATKRATEMMAHSYANI 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + L M++G + ++ G+ VRD+ Y++D V + Sbjct: 170 YQLPSTALRFFTVYGPWGRPDMALFLFTEAMLKGEPIRVFNHGKMVRDFTYIDDIVDGIL 229 Query: 235 LVLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 K + YNI GN++ + E+ L+ + + Sbjct: 230 RASAKIPVAMAGGAAQPDPAGSPVGPFRVYNI-GNSQPVELMRYIEV---LEGCLGVTAK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 L + D PG D S + ++ G+ P+ +E G+ + V WY +++P Sbjct: 286 KEMLPMQLGDVPGT----WADVSALAADTGYAPKIGVEEGVRRFVDWY---RGYYKP 335 >gi|229164205|ref|ZP_04292139.1| Nucleotide sugar epimerase [Bacillus cereus R309803] gi|228619227|gb|EEK76119.1| Nucleotide sugar epimerase [Bacillus cereus R309803] Length = 294 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 20/293 (6%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L+ I F+F++ DI D+ I +E++P+ +VN AA++ V SI D +I +NII Sbjct: 8 LEHIKSYENFTFIKDDISDKGMITRLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNII 67 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATK 161 G + +LE R + + S+ VYG+ K F E D NP S Y++TK Sbjct: 68 GFYNILEACRHYPVD---------HLVYASSSSVYGANKKVPFEETDFVDNPVSLYASTK 118 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN 219 S++ + + H Y IP YGP P+ + G + ++ GD +N Sbjct: 119 KSNELMAHTYSHLYNIPATGLRFFTVYGPMGRPDMAYFGFTDKYFAGESIKIFNNGDFEN 178 Query: 220 --VRDWLYVEDHVRALYLVLKKGRIGE----RYNIGGNNERKNIDIVFEIGFLLDALIPK 273 RD+ Y++D V + +L G+ +NIG NN K + + + +L + + Sbjct: 179 DLYRDFTYIDDIVEGIQRLLSNPPEGDVEHKVFNIGNNNPEKLMVFIETLEKVLGKALGR 238 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ I +PG + ++ + + P+ ++E GL + WY++ Sbjct: 239 EVAFEKVFEPI--KPGDVPATYASTDLLQKAVEFKPETSIEKGLQEFANWYVE 289 >gi|227544134|ref|ZP_03974183.1| possible dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri CF48-3A] gi|227185881|gb|EEI65952.1| possible dTDP-glucose 4,6-dehydratase [Lactobacillus reuteri CF48-3A] Length = 122 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 8/114 (7%) Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +RDW++ DH RA++ +L KG+IGE Y IG + E+ N + V E+ L +Y H Sbjct: 1 MRDWIHTNDHSRAVWDILTKGKIGETYLIGADGEKNNKE-VLEMILELMGQPKDAYDH-- 57 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 ++DRPGHD RYAID++K+++E+GW P+ + ++GL T+ WY ++ WW+ Sbjct: 58 ----VKDRPGHDLRYAIDATKLRTELGWEPEFTDFKTGLQHTIDWYTEHQDWWK 107 >gi|94986909|ref|YP_594842.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] gi|94731158|emb|CAJ54520.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] Length = 330 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 143/329 (43%), Gaps = 45/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++IVTGGAG+IGS C+ L +V D L+ K + Q F + DI Sbjct: 1 MKVIVTGGAGYIGSHTCKELARQ-GYNPIVYDNLS-----TGHKSLVQWGEFEY--GDIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++S + +PD +++FAA+S V S+ + N+ GT LLE Sbjct: 53 DLSRLQSVFHKHKPDGVIHFAAKSIVSESVSNPGYYFRNNVTGTLNLLETIY-------- 104 Query: 121 DKKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + +++ +S T VYG ++ EDMP P + Y +K + ++ ++ YG+ Sbjct: 105 --NSKVKYIVVSGTCAVYGQPEQMPIHEDMPKLPVTTYGVSKLVMESMLKSFEAAYGLSW 162 Query: 180 L------LSNC--SNNYGPYHFPE-KLIPLAITRMIEGSHVFLYG------DGQNVRDWL 224 + + C G +H PE LIPL + + + + ++G DG VRD++ Sbjct: 163 VSLRYFNAAGCDLDGETGEWHEPETHLIPLILKTITSNTPLTIFGDNYPTEDGTCVRDYI 222 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D RA L L KG E N+G + I+ + + +P Sbjct: 223 HVCDLARAHVLALNYLAKGETSEAINLGTGSGFSVRQIIDSVERITGRSVP--------Y 274 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + R G + K S +GW PQ Sbjct: 275 RLGQRREGDPPCLISSNQKAASLLGWRPQ 303 >gi|78485850|ref|YP_391775.1| NAD-dependent epimerase/dehydratase [Thiomicrospira crunogena XCL-2] gi|78364136|gb|ABB42101.1| NAD-dependent epimerase/dehydratase [Thiomicrospira crunogena XCL-2] Length = 336 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 92/350 (26%), Positives = 155/350 (44%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEI-SQSNL- 51 M+++VTG AGFIG + + L+ V+ ID L L++L ++ +S L Sbjct: 1 MKILVTGSAGFIGFYVTQALLKK-NHDVIGIDNLNDYYDVDLKKARLSTLNQVCKESGLE 59 Query: 52 --FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 + F+++DI +R + KE + D +++ AA++ V SI ++ +N++ +LE Sbjct: 60 KNYQFIEMDIANRAQVHDFFKEHRFDRVIHLAAQAGVRYSIENPHAYVDSNLVAFVNILE 119 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLV 168 R ++ + S+ VYG K FS ED P S Y+ATK S++ + Sbjct: 120 GCR---------QQKTAHLIYASSSSVYGMNTKIPFSTEDRVDFPISLYAATKKSNELMA 170 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + H YGIP YGP+ P+ ++++G + ++ G RD+ Y++D Sbjct: 171 HTYSHLYGIPTTGLRFFTVYGPWGRPDMAYFSFTKKILKGEKIDVFNHGNMERDFTYIDD 230 Query: 229 HVRALYLVL------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V + V+ I YNIG N K + I + K Sbjct: 231 IVEGVVRVMDHVPEITHSEITAAEAPYKIYNIGNNQPIKLERFIKAI----EMATGKQAV 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 L D P R YA D + +++G+ P+ +E G+N V WY D Sbjct: 287 KNNLPMQAGDVP---RTYA-DVGDLMNDVGFKPETTIEDGVNAFVDWYRD 332 >gi|307594590|ref|YP_003900907.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307549791|gb|ADN49856.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 318 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 16/249 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ D +V V+D + G L +LK + + ++ D+ + Sbjct: 5 VLVTGGAGFIGSHLVDRLIKD-GYRVRVVDNFS-TGRLENLKHLEDNPNLEVMRGDLKNE 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + R A+K DA+ +FAA V S + N++ TF LLE R + K Sbjct: 63 QDAREAVK--GADAVFHFAANPEVRVSSISPRVHFEENVVATFNLLEAMREY-------K 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + F S+ VYG ++ E+ P P S Y A+KA+ + L+ A+ YGI ++ Sbjct: 114 VKEMVF--ASSSSVYGEPEEIPVDENAPVRPVSVYGASKAACENLIHAYSKLYGIRAVIL 171 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV--LKKG 240 +N GP + L + + + GDG VR +LYV+D V A + L G Sbjct: 172 RYANIIGPRLRHGVIYDLLMKLKKNLDELEVLGDGTQVRSYLYVDDAVEATIIAWRLSNG 231 Query: 241 RIGERYNIG 249 E YN+G Sbjct: 232 NY-EVYNVG 239 >gi|8050839|gb|AAF71765.1|AF263912_4 NysDIII [Streptomyces noursei ATCC 11455] Length = 344 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 29/322 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQ-SNLFSFLQVDI 59 R ++TG G GS L +L++ QV + + G N K +S+ ++ F+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLSQ-GYQVWGLIR----GQANPRKSRVSRLASELDFIDGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ QPD + N A S V S A+ N +G +LE R+ S LS Sbjct: 59 MDQGSLVSAVDTVQPDEVYNLGAISFVPMSWQQAELVTEVNGMGVLRMLEAIRMV-SGLS 117 Query: 120 QDK----KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + Q RF Q S+ E++G + E ++P SPY A KA Y+ + ++ Sbjct: 118 TSRTVSPRGQIRFYQASSSEMFGKAAETPQRETTLFHPRSPYGAAKAYGHYITRNYRESF 177 Query: 176 GIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVR 231 G+ + N+ P F + I LA+ R+ +G G+ VRDW Y D+VR Sbjct: 178 GMYAVSGMLFNHESPRRGQEFVTRKISLAVARIKQGLQDKLALGNLDAVRDWGYAGDYVR 237 Query: 232 ALYLVLKKGRIGERYNIGG---NNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDR 287 A++L+L++ G+ Y IG ++ R + I FE +G + + +L+ R Sbjct: 238 AMHLMLQQD-AGDDYVIGTGQMHSVRDAVRIAFEHVGLNWEDYV---VIDPDLV-----R 288 Query: 288 PGHDRRYAIDSSKIKSEIGWFP 309 P DS+K + +GW P Sbjct: 289 PAEVEVLCADSAKAQDRLGWKP 310 >gi|229199378|ref|ZP_04326043.1| UDP-glucose 4-epimerase [Bacillus cereus m1293] gi|228584092|gb|EEK42245.1| UDP-glucose 4-epimerase [Bacillus cereus m1293] Length = 330 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTKENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|170741396|ref|YP_001770051.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168195670|gb|ACA17617.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 350 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 146/348 (41%), Gaps = 47/348 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M +VTG AGFIG L R L+ D +V ID LT L +L+ +N Sbjct: 1 MHCVVTGAAGFIGFHLARRLLADGH-RVTGIDGLTDYYDVGLKRARLRALEGPGFANHVG 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 L+ + + + +PD +V+ AA++ V S+ ++ N++GTF +LE R Sbjct: 60 LLE----EPGFFARVMDQARPDILVHLAAQAGVRYSLENPASYVAANVVGTFEVLEGLR- 114 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWG 172 L ST VYG D+ F E P P S Y+A+K + + + A+ Sbjct: 115 --------AHPVRHALLASTSSVYGGNDRVPFRETDPVARPVSLYAASKVAGESMAHAYA 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + IP YGP+ P+ + + R++ G V ++ G+ RD+ Y++D + + Sbjct: 167 HLWRIPTTAFRFFTVYGPWGRPDMAVFVFTKRILAGEPVEVFDHGRAARDFTYIDDLIES 226 Query: 233 LYLVLKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ + G NIGG N D LLD L ++ Sbjct: 227 IVRLIDRPPGGAPVSESDSLSPVAPFRVVNIGGGNPATVSD-------LLDGL--EAALG 277 Query: 278 TELIRFIEDRPGHDRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + D P D ++ ++ IG+ P + G+ V WY Sbjct: 278 RRATRLLRDLPPGDVPLTQAETGLLRDLIGYAPATPLREGVAAFVDWY 325 >gi|34556483|ref|NP_906298.1| putative UDP-glucuronic acid epimerase [Wolinella succinogenes DSM 1740] gi|34482197|emb|CAE09198.1| PUTATIVE UDP-GLUCURONIC ACID EPIMERASE [Wolinella succinogenes] Length = 350 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 68/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNS------ 42 M+++VTG AGFIGS L + L +ND + +L AG +S Sbjct: 1 MKILVTGTAGFIGSHLAKRLLERGDEVVGLDNINDYYDLRVKYGRLERAGIESSSIEYGK 60 Query: 43 -LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L ++SN + F+++++ DRE + + ++ + D + N AA++ V S+ +I +NI Sbjct: 61 LLSSATESN-YRFVKLNLEDREALHALFEQEKFDKVCNLAAQAGVRYSLTNPYAYIDSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPS 154 +G +LE R + S+ VYG +E MP+ +P Sbjct: 120 VGFINILEGCRHFGVK---------HLAYASSSSVYG------LNESMPFSTSDNVDHPI 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+A+K S++ + + H Y IP YGP+ P+ + L ++E + ++ Sbjct: 165 SLYAASKKSNELMAHTYSHLYKIPTTGLRFFTVYGPWGRPDMALFLFTKAILEDRAIDVF 224 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKN 256 G+ +RD+ YV+D V + V+ +G+ YNIG N+ + Sbjct: 225 NHGEMLRDFTYVDDIVEGVVRVIDNPPMGDPNWSGKHPNPGSSKAPYKIYNIGNNSPVRL 284 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +D + EI L + K+ ++ D P YA D S + + + P ++E G Sbjct: 285 MDFITEIEKNLGKVAKKNMLPLQM----GDVPA---TYA-DVSDLVENLHYKPNTSIEEG 336 Query: 317 LNKTVCWY 324 + + V WY Sbjct: 337 IARFVKWY 344 >gi|226364967|ref|YP_002782750.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] gi|226243457|dbj|BAH53805.1| putative UDP-glucose 4-epimerase [Rhodococcus opacus B4] Length = 558 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 46/271 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C + + V+++D L+ GN +++ ++ FL+ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAQRLLECGHTVVIVDDLST-GNADAVPAGAE-----FLEDDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 L D +++FAA S V S+ + + N++ T LLE R S Sbjct: 54 S--AAHRLLGAGDVDGVLHFAARSLVGESVETPETYWQANVVKTLTLLEAMRSSGS---- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YGS D +ED P P++PY ATK + D+ + ++ H +G Sbjct: 108 -----GRLVFSSTAATYGSPDSVPITEDAPTRPTNPYGATKLAIDHAITSYAHAHG---- 158 Query: 181 LSNCSNNY----GPYH-------FPEKLIPLAITRMIEGSH---VFLYG------DGQNV 220 L+ CS Y G Y LIPL + + H + ++G DG V Sbjct: 159 LAACSLRYFNVAGAYAGLGENRVVETHLIPLVL--QVAAGHRDEISVFGTDWPTPDGTAV 216 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER--YNIG 249 RD++++ D A L L+ R G YN+G Sbjct: 217 RDYIHIRDLAEAHVLALESSRPGTHRIYNLG 247 >gi|104774538|ref|YP_619518.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514658|ref|YP_813564.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423619|emb|CAI98565.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093973|gb|ABJ59126.1| UDP-galactose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126370|gb|ADY85700.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 329 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 50/347 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV D V+V+D L + G+ ++ ++ F QVD+ Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGN-DVVVLDSL-FTGHKEAIDPKAK-----FYQVDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL---EETRLWWSC 117 D++ + LK+ + +A+++FAA S V S+ ++ N+ G LL EET + + Sbjct: 54 DKDAVADVLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLV 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S S+ YG +K +E+ P NP +PY TK + ++ GI Sbjct: 114 FS------------SSAATYGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVF-LYG------DGQNVR 221 V ++ + G H PE LIP + + G F ++G DG NVR Sbjct: 162 KSIALRYFNVAGASLDGSIGEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVR 221 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++V D + A L LK + + +N+G N++I+ + IP + Sbjct: 222 DYVHVVDLIDAHVLALKHLMETNQSDVFNLGTATGFSNLEILKAAIKVTGVDIPYTIG-- 279 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ------PRRGGDPDSLVADSSKARKVLGWSPKYENVDDIIASAWNWH 320 >gi|168187394|ref|ZP_02622029.1| UDP-glucose 4-epimerase [Clostridium botulinum C str. Eklund] gi|169294723|gb|EDS76856.1| UDP-glucose 4-epimerase [Clostridium botulinum C str. Eklund] Length = 331 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 36/343 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQSNLFSFLQVD 58 +++VTG GFIGS L LV +L V + + N +++ + + N+ + D Sbjct: 7 KVLVTGAEGFIGSHLTERLV-ELGADVTALVQYNSFNNWGWIDTFNKNVKDNI-KVITGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + ++ + + I++ AA + S L ++ TN+ GT +LE R Sbjct: 65 VREYDNVKRMVS--GQEVIMHLAALIAIPYSYLSPMAYVRTNVEGTTNILEACR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K+ + + ST E YG+ E P SPYSA+K +D + ++ ++ +P Sbjct: 117 --EEKNIEKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIGADKMAESFYRSFNLP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 175 IATIRPFNTYGPRQSARAVIPTIISQVLAGKREIKLGSLTPTRDFNYVKDTAEAFIKIAE 234 Query: 239 KGR-IGERYNIGGNNE-------RKNIDIV-FEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + IGE N G N E +K I+++ ++ L D E IR + Sbjct: 235 SDKTIGEVINAGSNYEITIGETAKKIIELIGHDVKILCDE---------ERIR---PQKS 282 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R D++KIK+ W P+ +++ GL +T+ W +N +++ Sbjct: 283 EVNRLWADNTKIKNLTDWTPKYSIDEGLRETIEWIKNNMQYFK 325 >gi|78358100|ref|YP_389549.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220505|gb|ABB39854.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 331 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LCR L+ D +VL D + G+ + ++++ + F L+ DI Sbjct: 13 RILVTGGAGFIGSHLCRVLL-DRGAEVLCADNY-FTGSRDHVRDLLDNPRFELLRHDI-- 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T + G+ + L Sbjct: 69 -----TFPLYIEVDEIYNLACPASPVHYQFDPVQTTKTCVHGSI----------NMLGLA 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + ED P P S Y K ++ L + + +G Sbjct: 114 KRVKARILQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRCAETLFMDYRRQHG 173 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + ++ + +YGDG R + YV+D V L Sbjct: 174 VEIKIARIFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLL 233 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L+ N+G +ER ++ L D +I + S +EL+ + P D + Sbjct: 234 RLMHSPADFCGPVNLGNPSERTVLE-------LADKIITLTGSRSELV--FKPLPADDPQ 284 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D S + + W P +++ GL +T+ ++ Sbjct: 285 RRRPDISMARRHLEWEPAVDIDEGLAETIRYF 316 >gi|228993940|ref|ZP_04153842.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] gi|228765738|gb|EEM14390.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] Length = 342 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 54/343 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ ++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILVTGGAGYIGSHTCVELLNN-GYDIIVVDNLSNSSVESLNRVKEITGKQ-FKFYEEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ I KE +A+++FA V S+ + NI T IL C Sbjct: 59 LLNRDAIDVIFKENIIEAVIHFAGLKAVGESVAIPLTYYHNNITSTLIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 K + + + S+ VYG + +E+ P N ++PY TK A S++ Sbjct: 110 VMQKHNVKKMIFSSSATVYGLPETSPITEEFPLNATNPYGQTKLMIEQMMRDVVVADSEW 169 Query: 167 --LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYG 215 ++L + + +G ++ S G P P L+P +A+ ++ E S + + Sbjct: 170 SVVLLRYFNPFG-----AHESGRMGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTK 224 Query: 216 DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V D HV+AL VL + + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLANGHVKALEKVLHTTGV-DTYNLGTGTGYSVLEMVQAFEKVSGKSV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P + E RPG D+SK K E+GW + +E Sbjct: 284 P--------YKITERRPGDVAVCFADASKAKRELGWEAKRGLE 318 >gi|254478570|ref|ZP_05091944.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum DSM 12653] gi|214035499|gb|EEB76199.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum DSM 12653] Length = 315 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 25/326 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-TYAGNLNSLKEISQS---NLFSFLQVDI 59 +VTGGAGFIGS L L+ + QV V+D + K IS + ++DI Sbjct: 5 LVTGGAGFIGSHLVDRLLKE-GWQVTVVDNFDPFYDPAIKRKNISAHFDYKTYRLFEIDI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + L + D IV+ AA++ V SI + N+ GT LLE R Sbjct: 64 RDMEALHEKLTD-DYDVIVHLAAKAGVRPSIQDPIGYQEVNVRGTQNLLEFAR------- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +F+ S+ VYG + ED P SPY++TK S + L + H YGI Sbjct: 116 --HRGIKQFVFASSSSVYGINHNVPWKEDDCVLKPISPYASTKVSGELLGHVYSHLYGIR 173 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + YGP P+ I M+EG + +YGDG + RD+ Y++D + + + Sbjct: 174 FIALRFFTVYGPRQRPDLAIHKFARLMLEGKPIPIYGDGSSRRDYTYIDDIIEGVRRAMD 233 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + E N+G N + + ++ + L +AL +++ + F+ +PG + D Sbjct: 234 YTATLYEVINLGNN---QIVSLLEMVRTLEEALGIRAH-----LEFLPLQPGDVPQTWAD 285 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 K + +G+ P+ + G++ V W Sbjct: 286 MEKAERLLGFRPKIEFKKGIHNFVEW 311 >gi|332665348|ref|YP_004448136.1| UDP-glucuronate 4-epimerase [Haliscomenobacter hydrossis DSM 1100] gi|332334162|gb|AEE51263.1| UDP-glucuronate 4-epimerase [Haliscomenobacter hydrossis DSM 1100] Length = 350 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 73/371 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVN-----------------DLK---IQVLVIDKLTYAGNLN 41 R++VTG AGFIG L + L+ DLK + L ID+ + Sbjct: 3 RILVTGAAGFIGFHLAKQLIERGDLVVGLDSLNDYYEIDLKHARLAQLGIDRSSILPG-- 60 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L +Q+N FSF+Q++I D + ++ D ++N AA++ V S++ +I +NI Sbjct: 61 ELISGAQAN-FSFVQMNIDDLSGLEKLFQDQGFDVVINLAAQAGVRYSLINPHAYINSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPS 154 +G +LE C K + S+ VYG + +MP+ +P Sbjct: 120 VGFVNILE-------CCRHHKIKHLVY--ASSSSVYG------LNTEMPFSTSHNVDHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFL 213 S Y+A+K S++ + + H YG+P YGP+ P+ + P T+ I G + + Sbjct: 165 SLYAASKKSNELMAHTYSHLYGLPTTGLRLFTVYGPWGRPD-MAPFLFTKAILAGEPIKV 223 Query: 214 YGDGQNVRDWLYVEDHVRALYLV------------------LKKGRIGERYNIGGNNERK 255 + +G+ +RD+ YV D V + LV + YNIG N Sbjct: 224 FNEGKMIRDFTYVGDIVAGIVLVADRIPAPNPNWNPALADPARSSAAYRIYNIGNNLPVS 283 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 + + A K+ + + + +PG D S ++++ G+ P +++ Sbjct: 284 LAEFI--------AATEKALGKVAIKQMMPMQPGDVVATFADVSDLEADTGYKPGTSIQE 335 Query: 316 GLNKTVCWYLD 326 G+ + V WY D Sbjct: 336 GMQRFVDWYRD 346 >gi|227354753|ref|ZP_03839171.1| nucleotide sugar epimerase [Proteus mirabilis ATCC 29906] gi|227165196|gb|EEI50024.1| nucleotide sugar epimerase [Proteus mirabilis ATCC 29906] gi|302378449|gb|ADL32284.1| Gla [Proteus mirabilis] Length = 334 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 M+ +VTG AGFIG L + L+ + V+ ID L ++ +LKE ++Q + FSF Sbjct: 1 MKYLVTGAAGFIGFHLIKKLIQQGET-VVGIDNLNDYYDV-ALKEARLNLLNQLDNFSFS 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+ DRE I + + D +++ AA++ V S++ + +N+ G +LE Sbjct: 59 FIDLADREKIAQLFEAEKFDRVIHLAAQAGVRYSLINPFSYADSNLTGFLTILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG D+ FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHNNVK---HLVYASSSSVYGLNDELPFSPHDQANHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + +I + +Y G+ RD+ YVED V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTKAIINNQPIDIYNHGEMKRDFTYVEDIVEGVT 229 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ YNIG + +D + + L K+ Sbjct: 230 RIADVIPTAQQDWKVSTGTPADSSAPYKVYNIGNGSPVNLMDYISALEIHLGKKADKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + G+ PQ +++ G+ + V WY Sbjct: 288 ------MLPMQPGDVYTTWADTEDLFKATGYKPQTSVDEGIKQFVDWY 329 >gi|318042798|ref|ZP_07974754.1| WbnF [Synechococcus sp. CB0101] Length = 344 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 49/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQ----SNLFSF 54 +++TG AGFIG+A+ L+ + VL ID L T A L+ + Q + F F Sbjct: 5 ILITGVAGFIGAAVAETLLQRGE-AVLGIDNLNSYYTPALKQARLERLQQRPEAAQGFQF 63 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 L +D+ D + S +P A+V+ AA++ V S+ +I +N++G +LE R Sbjct: 64 LPIDVDDAAAMASLFASHRPRAVVHLAAQAGVRYSLENPSAYIQSNLVGFGHILEGCR-- 121 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGH 173 + S+ VYG FSE N P S Y+ATK +++ + + H Sbjct: 122 -------HHGVEHLVYASSSSVYGGNRAMPFSEQHAVNHPVSLYAATKKANELMAHTYSH 174 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+P YG + P+ + P+ R I G + ++ G+ RD+ Y++D Sbjct: 175 LYGLPATGLRFFTVYGAWGRPD-MAPMLFARAILAGEPIRVFNHGRMQRDFTYIDDIAEG 233 Query: 233 LYLVLKKGRIGERY--NIGGNNERKNID-IVFEIGFLLDALIPKSYSHTELIRFIE---- 285 + L K + + N + VF IG + TEL+RFIE Sbjct: 234 VIRCLDKPSTPDPLFDPLQPNPATAAVPHRVFNIG---------NAQPTELLRFIEVLEQ 284 Query: 286 ------------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A D+S +++ +G+ P ++E G++ WY Sbjct: 285 ALGRRAIQDLQPMQPGDVVATAADTSALEAWVGFRPSTSIEQGVDAFARWY 335 >gi|154688007|ref|YP_001423168.1| hypothetical protein RBAM_036080 [Bacillus amyloliquefaciens FZB42] gi|154353858|gb|ABS75937.1| GalE [Bacillus amyloliquefaciens FZB42] Length = 338 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 94/361 (26%), Positives = 161/361 (44%), Gaps = 62/361 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N ++V+D L+ + L +K+I+ L F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNG-GYDIVVLDNLSNSSPEALERVKDITGKGLV-FYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + E + +A+++FA V S+ + N+ GTFIL C Sbjct: 59 LLDRDAVHRVFAENEIEAVIHFAGLKAVGESVAVPLRYYHNNLTGTFIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + + S+ VYG + +ED P + ++PY T KA S++ Sbjct: 110 AMQAHGVKKIVFSSSATVYGVPETTPITEDFPLSATNPYGQTKLMLEQILRDLHKADSEW 169 Query: 167 LV--LAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------ 215 + L + + +G ++ S G P P L+P +A + + + ++G Sbjct: 170 SIALLRYFNPFG-----AHPSGRIGEDPNGIPNNLMPYIAQVAVGKLEQLQVFGNDYPTK 224 Query: 216 DGQNVRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V E HVRAL VL + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLAEGHVRALEKVLDTTG-ADAYNLGTGRGYSVLEMVKAFEKVSGKEV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 P RF RPG D +K K+E+GW + +E +C ++W W Sbjct: 284 P--------YRFAARRPGDIAACFADPAKAKAELGWEAKRGLEE-----MCA---DSWKW 327 Query: 332 R 332 + Sbjct: 328 Q 328 >gi|190893074|ref|YP_001979616.1| UDP-glucuronic acid epimerase [Rhizobium etli CIAT 652] gi|190698353|gb|ACE92438.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CIAT 652] Length = 338 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-----L 55 MR +TG AGFIG L R L+ + +V D LT N+ LKE+ + L F + Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-EVTGFDGLTPYYNVK-LKEMRHAALSQFPAFKPV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR + +A+ PD +++ AA++ V S+ + +I +N+ G+ W Sbjct: 59 IAMLEDRPALEAAVLTATPDILIHLAAQAGVRYSLENPEAYIHSNVEGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 109 NIMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP YGP+ P+ + M+EG + +YG+G RD+ Y++D V A+ Sbjct: 169 LHKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLVEAI 228 Query: 234 YLV------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + L + NIGG +D V + K+ Sbjct: 229 VRLSAIAPSEENRLDDAAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKTL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G R + + G+ P ++ G+ V WYLD Sbjct: 281 GRPAIRLMLAMQKGDVPRTFAAPDLLIALTGYKPDTTLDVGVKAFVDWYLD 331 >gi|229094562|ref|ZP_04225629.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-42] gi|228688809|gb|EEL42640.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-42] Length = 338 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 97/352 (27%), Positives = 160/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NIIGT +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIIGTIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|254819876|ref|ZP_05224877.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium intracellulare ATCC 13950] Length = 314 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 28/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 MR +VTG AGFIGS L L+ D V+ +D +G ++L+ ++ + F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLGDGHT-VVGLDNFA-SGRASNLEHLADNPAHVFVEADIV 58 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D E I L E +P+ + + AA+ V S+ + N+IGT L E R Sbjct: 59 TADLEAI---LDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAAR------ 109 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ +YG + E +P +P+SPY+A K + + + + H YG+ Sbjct: 110 ---RAGVRKVVHTSSGGSIYGVPPRYPTPETVPTDPASPYAAGKVAGEIYLNTFRHLYGL 166 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A Sbjct: 167 DCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGGNTRDYVFVDDVVDAFV 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G R+NIG E + L + + + F R G +R Sbjct: 227 KASGDAGGGRRFNIGTGVETSDRQ--------LHTAVAAAVGGPDDPEFAPPRLGDLKRS 278 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +GW P+ + G+ +TV ++ Sbjct: 279 CLDIGSAAEVLGWRPKVELTEGVRRTVDYF 308 >gi|302378496|gb|ADL32328.1| Gla [Proteus mirabilis] Length = 336 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 M+ +VTG AGFIG L + L+ + V+ ID L ++ +LKE ++Q + FSF Sbjct: 1 MKYLVTGAAGFIGFHLIKKLIQQGET-VVGIDNLNDYYDV-ALKEARLNLLNQLDNFSFS 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+ DRE I + + D +++ AA++ V S++ + +N+ G +LE Sbjct: 59 FIDLADREKIAQLFEAEKFDRVIHLAAQAGVRYSLINPFSYADSNLTGFLTILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG D+ FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHNNVK---HLVYASSSSVYGLNDELPFSPHDQANHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + +I + +Y G+ RD+ YVED V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTKAIINNQPIDIYNHGEMKRDFTYVEDIVEGVT 229 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ YNIG + +D + + L K+ Sbjct: 230 RIADVIPTAQQDWKVSTGTPADSSAPYKVYNIGNGSPVNLMDYISALEIHLGKKADKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + G+ PQ +++ G+ + V WY Sbjct: 288 ------MLPMQPGDVYTTWADTEDLFKATGYKPQTSVDEGVKQFVDWY 329 >gi|320530096|ref|ZP_08031166.1| NAD-binding domain 4 [Selenomonas artemidis F0399] gi|320137529|gb|EFW29441.1| NAD-binding domain 4 [Selenomonas artemidis F0399] Length = 328 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 155/334 (46%), Gaps = 33/334 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS LC L++ + +V V+D L+ Y N++ L+ + F F++ DI Sbjct: 18 FLVTGGAGFIGSNLCEALLS-MGHRVRVLDNLSTGYEKNISGLRTHEK---FEFIEGDIK 73 Query: 61 D-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D C R D +++ AA V SI + TNI+GT +++ + + Sbjct: 74 DFAACARVCAG---VDYVLHQAAAVSVPESIEQPIAYTETNIMGTVNMMQ-----AAAAA 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK F+ S+ VYG E++ S Y+ TK ++ + + YG+ Sbjct: 126 HVKK----FVYASSSAVYGDDQTMPKREEIVGRRLSTYAVTKYVAEEYAVQYTMHYGLDC 181 Query: 180 LLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--L 233 N YG P +IP + ++ + + GDG+ RD++YVED V+A L Sbjct: 182 YGMRYFNVYGRRQDPNGAYAAVIPKFVEALLHDTPPTVNGDGEQSRDFVYVEDVVQANLL 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 GE YNI + R +++ ++ + L L+ K + + +R G R Sbjct: 242 ACAAPHEAAGEAYNI-ASGTRSSLNEMYAV---LKELLGKDLTPV----YGPERAGDIRH 293 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D K + ++G+ P+ + + G+ + + WY +N Sbjct: 294 SGADIRKAREKLGYAPEYDFKRGVTEAIAWYREN 327 >gi|39997073|ref|NP_953024.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|39983963|gb|AAR35351.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|298506087|gb|ADI84810.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter sulfurreducens KN400] Length = 336 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 29/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS---LKEISQSNLFSF--LQ 56 +++VTG GFIGS +L L ++ Y + NS L + L S Sbjct: 7 KILVTGADGFIGS----HLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D +R A+K D +++ AA + S D ++ TN+ GT +++ R Sbjct: 63 GDIRDPHGVREAMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGV 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + ST EVYG+ +E+ P SPYSA+K +D + +++ ++ Sbjct: 121 A---------KVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYSSFD 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 PV + N YGP IP IT++ G+ G RD YV D V V Sbjct: 172 TPVAIIRPFNTYGPRQSARAFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAV 231 Query: 237 LKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + + +GE NIG N E I + + D + T+ R D+ +R +A Sbjct: 232 AESEKSVGEVINIGSNFE---ISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWA 288 Query: 296 IDSSKIKSEI----GWFPQENMESGLNKTVCWYL 325 D+SK K + + ++ + GL +TV W++ Sbjct: 289 -DTSKAKRLLDHGQNYGGKDGLRRGLVETVEWFV 321 >gi|228994844|ref|ZP_04154641.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228764891|gb|EEM13648.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 304 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 150/327 (45%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + +L+ + I +V+D L N +++ F DI Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLEN-NIDTVVVDNLVTGHKYNIPSKVA------FYHFDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E +PD +++ AA+ V S+ + N++ T +L+ +C+ Sbjct: 54 DPNIDKIFMVE-KPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQ------ACIKY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + ST VYG+ E+ NP S Y +K +S+ + + YG+ Sbjct: 107 NVK---KIIYASTAAVYGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG + +I + + R+ + +YGDG RD+++V+D A +L Sbjct: 164 ILRYSNVYGARQNTDGEAGVISIFMDRLFKNDSPIIYGDGNQTRDFIFVKDVAHANFLAF 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + NI N + + LLD + + I + E+RPG + Sbjct: 224 RNAD-NQICNISSNQQ-------ISVNELLDTICNLMKIENKRI-YKEERPGDVIHSYLS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 + K + + W P+ ++ GL +T+ ++ Sbjct: 275 NDKARKYLNWHPEFSLLQGLGETISFF 301 >gi|328771785|gb|EGF81824.1| hypothetical protein BATDEDRAFT_36715 [Batrachochytrium dendrobatidis JAM81] Length = 425 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 33/334 (9%) Query: 4 IVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT-------YAGNLNSL--KEISQSNLF 52 +VTGGAGFIGS L+ D V+V+D++ NL++L + + F Sbjct: 6 LVTGGAGFIGSHTAEALLLRGD---SVIVVDEINDYYSINQKQHNLDALCAAALRSKSAF 62 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F Q D + + + D + + AA + V SI +I N+ T LLE +R Sbjct: 63 KFYQGSCQDESFMANIFEAEHIDIVCHLAARAGVRPSIRNPFLYIQANVTATVNLLELSR 122 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 + + F+ S+ VYG K F+E D P SPY+ATK + + + + Sbjct: 123 ---------QHNISNFVYASSSSVYGKNTKVPFAETDRTDYPVSPYAATKKTCELMATTY 173 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H YG+P YGP P+ L + ++ G + +GDG + RD+ ++ D V Sbjct: 174 NHMYGLPTTGLRFFTVYGPRGRPDMAPFLFVDKISRGIPIDKFGDGTSCRDYTFITDIVS 233 Query: 232 ALYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + L + + YN+G + D + +I ++ +I + D+ G Sbjct: 234 GILAALDRPSQKAAIYNLGNSATVSLNDFIH--------VIEETVGKKAVIHSLPDQLGD 285 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + + E+G+ P ++ +G+ V WY Sbjct: 286 VFRTYADLTLSERELGYQPTTDIRAGMRLFVDWY 319 >gi|218231676|ref|YP_002370042.1| UDP-glucose 4-epimerase [Bacillus cereus B4264] gi|218159633|gb|ACK59625.1| UDP-glucose 4-epimerase [Bacillus cereus B4264] Length = 336 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 60/360 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + N+ T +L C Sbjct: 59 VLNREALDTIFEENTIEAVIHFAGFKAVGESVAIPLTYYHNNLTSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + + S+ VYG + +E+ P + ++PY TK + ++ H I Sbjct: 110 VMQKYNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIM----HDVAIA 165 Query: 179 -----VLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGS---HVFLYGD 216 + L N +G P P L+P +A+ ++ E S + + D Sbjct: 166 DADWSIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G +RD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 226 GTGIRDYIHVVDLANGHVKALEKVLNNTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK KSE+GW +E +C ++W W+ Sbjct: 285 --------YKITERRPGDVAVCFADASKAKSELGWEATRGLEE-----MCA---DSWKWQ 328 >gi|75762844|ref|ZP_00742662.1| UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489667|gb|EAO53065.1| UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 355 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 18 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 75 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 76 VLNREALDAIFEENVIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 126 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHT-Y 175 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 127 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 186 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 GI +L ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 187 GIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 246 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL V+ + + YN+G +++V + +P Sbjct: 247 RDYIHVVDLANGHVKALEKVMSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 301 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E RPG D+SK K E+GW +E + W +N Sbjct: 302 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEEMCADSWKWQSNN 348 >gi|282899586|ref|ZP_06307550.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] gi|281195465|gb|EFA70398.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] Length = 336 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 28/249 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS-----------QS 49 M+++VTG AGFIG L YL+N D + NLNS ++S + Sbjct: 1 MKILVTGAAGFIGFHLSNYLLNRG-------DYVVGIDNLNSYYDVSLKQARLVQLEPHN 53 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 LFSF+ +D+ DR+ + + ++Q D +VN AA++ V SI +I +NIIG +LE Sbjct: 54 KLFSFIPLDLADRDRVNNLFAQYQFDVVVNLAAQAGVRYSIKNPHAYIDSNIIGFTNVLE 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLV 168 R + + S+ VYG+ K FS D +P S Y+ATK +++ + Sbjct: 114 ACRHYGVK---------HLVFASSSSVYGANTKIPFSTHDNVDHPISLYAATKKANELMA 164 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + H Y +P YGP+ P+ ++ G + ++ G+ RD+ Y++D Sbjct: 165 HTYSHLYELPTTGLRFFTVYGPWGRPDMAYFSFTKAILSGQPIDVFNYGKMKRDFTYIDD 224 Query: 229 HVRALYLVL 237 + + V+ Sbjct: 225 IIEGVVRVI 233 >gi|218961006|ref|YP_001740781.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) (GalE-like) [Candidatus Cloacamonas acidaminovorans] gi|167729663|emb|CAO80575.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) (GalE-like) [Candidatus Cloacamonas acidaminovorans] Length = 309 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 152/332 (45%), Gaps = 32/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS + + L+ + +V V+D N L + L + ++ D+ Sbjct: 1 MKYLVTGGAGFIGSNIVKELLKQNQ-EVRVLDNFATGKRENILPLLKDPKL-TLIEGDLR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLWWSC 117 +RSA+K D I++ A V RSI ++ ITTN I+G +LE + + Sbjct: 59 SFHIVRSAVKGV--DYILHQGALPSVPRSI---NDPITTNDVNILGMLNILEAAKEF--- 110 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + S+ +YG+ + E MP NP SPY+ TK + + + YG+ Sbjct: 111 ------EVKRVICASSSSIYGNSEFLPKVETMPVNPMSPYALTKYTQERYCQIFYQLYGL 164 Query: 178 PVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 + N +GP P +IP I M+ +YGDG RD+ YVE++V A Sbjct: 165 ETVSLRYFNVFGPNQDPTSQYSAVIPKFIKLMMPDKRPIIYGDGSQSRDFTYVENNVWAN 224 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + GE NI +D+V LL+ ++ K F ++R G + Sbjct: 225 IQACTAEKAAGEVINIACGESYTLLDLV----KLLNEILGKDIEPI----FEKERAGDVK 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K K IG+ + + + GL +TV +Y Sbjct: 277 HSLAGIDKAKELIGYEVRVDFKEGLQRTVEFY 308 >gi|294625189|ref|ZP_06703831.1| nucleotide sugar epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600508|gb|EFF44603.1| nucleotide sugar epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 321 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + ++D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNSYYDPQLKHDRVATLCPGLDIRRLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDREGLAALFDEIQPTRVVHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 L---KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSDAPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVDW 312 >gi|295402766|ref|ZP_06812705.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|312111019|ref|YP_003989335.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y4.1MC1] gi|294975199|gb|EFG50838.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|311216120|gb|ADP74724.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y4.1MC1] Length = 327 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 29/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 + +TG AGFIG L + L+ D VL +D + Y +L + LK + + F F++ Sbjct: 8 IFITGCAGFIGFHLTKRLL-DEGFSVLGMDDMNDYYDTSLKYDRLKIVMKHPHFRFVKGS 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E + ++ D +VN AA+ V S+ ++I N++G +LE C Sbjct: 67 IENIELLEKLFSQYDVDTVVNLAAQPGVRYSLKNPHKYIQANVVGFANILE------CC- 119 Query: 119 SQDKKDQFRFL-QISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 KK + R L S+ VYG+ FS D +P S Y+ATK +++ + + H Y Sbjct: 120 ---KKHKIRHLIYASSSSVYGNNKNAPFSVADRTDSPVSLYAATKKANELMAYTYSHLYR 176 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + +++ + +Y G RD+ YV+D ++ + Sbjct: 177 LPTTGLRFFTVYGPWGRPDMALFKFANAIVKQQPIEIYNYGNMKRDFTYVDDVTESILRL 236 Query: 237 LKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + KG E YNIG N + + + + I L + L K+ + + + +PG Sbjct: 237 IDKGPSTESPYKIYNIGNN---QPVQLNYFIEVLEEHLGKKA-----IKKLLPMQPGDVP 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D ++ +I + P+ ++E G+ + V W+ D Sbjct: 289 ETFADIDELVKDINYKPKVSIEEGIKRFVEWFKD 322 >gi|229014616|ref|ZP_04171731.1| UDP-glucose 4-epimerase [Bacillus mycoides DSM 2048] gi|228746693|gb|EEL96581.1| UDP-glucose 4-epimerase [Bacillus mycoides DSM 2048] Length = 338 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ + +++V+D L+ + ++N + EI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLKN-GYEIIVVDNLSNSSVESINRVTEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 ILNREALDTIFEENTIEAVIHFAGFKAVGESVEIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K D + + S+ VYG + +E+ P + ++PY TK + ++ +A+ G Sbjct: 110 VMQKHDLKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADA-G 168 Query: 177 IPVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQN 219 + L N +G P P L+P +A+ ++ E S + + DG Sbjct: 169 WSIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLANGHVKALEKVLGTTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 -----YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|183602184|ref|ZP_02963552.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis HN019] gi|241191416|ref|YP_002968810.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196822|ref|YP_002970377.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218677|gb|EDT89320.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis HN019] gi|240249808|gb|ACS46748.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251376|gb|ACS48315.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177542|gb|ADC84788.1| UDP-glucuronate 4-epimerase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794409|gb|ADG33944.1| nucleotide sugar epimerase [Bifidobacterium animalis subsp. lactis V9] Length = 378 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 35/345 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++TG AGFIG L L++ I ++ +D L Y L L+ +++ F + Sbjct: 41 ILITGAAGFIGWNLAERLLHSYPDITIVGLDNLNDYYDVKLKEARLERLTKYPNLIFEKG 100 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D++ I ++ D +VN A++ V SI D ++++N+IG + +LE R Sbjct: 101 DLSDKKLIGRLFEKHHFDVVVNLGAQAGVRYSITNPDAYVSSNLIGFYNILEACR----- 155 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG K FS ED NP S Y+ATK S++ + A+ Y Sbjct: 156 ----HNPVEHLVYASSSSVYGGNKKVPFSTEDKVDNPVSLYAATKKSNELMAHAYSKLYD 211 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ +++ G + ++ G RD+ Y++D V + V Sbjct: 212 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLLAGETIKIFNYGNCQRDFTYIDDIVEGIVRV 271 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSY---SHTE 279 ++ + GE YNIG + +D V + + ++P Y +H E Sbjct: 272 IQGAPTRQTGEDGLPVPPYALYNIGCGHPENLLDFVTTLQEELIRAEVLPDDYDFEAHKE 331 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D+ + + G+ P ++ GL + WY Sbjct: 332 LVPM---QPGDVPVTYADTEALTRDYGYRPTTSLRDGLRRFAEWY 373 >gi|13475639|ref|NP_107206.1| putative nucleotide sugar epimerase [Mesorhizobium loti MAFF303099] gi|14026395|dbj|BAB52992.1| putative nucleotide sugar epimerase [Mesorhizobium loti MAFF303099] Length = 353 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 156/351 (44%), Gaps = 49/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIG + L+ + V+ +D T ++ LKE + L F+ +Q+ Sbjct: 10 IVVTGTAGFIGFHVASRLLRR-GLAVIGVDNFTPYYDVG-LKEARFAQLCAEPGFTPMQM 67 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D+ +++ +FQP V+ AA++ V S+ ++ +NI+ +LE R Sbjct: 68 DLADQALVKALFSDFQPSHFVHLAAQAGVRYSLADPHAYVQSNIVAFLNVLEGCR----- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ FSE +P S Y+ATK++++ + ++ H +G Sbjct: 123 ----HAGVSHLVYASSSSVYGANRSIPFSEHHGASHPVSFYAATKSANECMAHSYSHLFG 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV YGP+ P+ + + EG + + G+ RD+ Y++D V + V Sbjct: 179 LPVTGLRFFTVYGPWGRPDMAVYTFTHAIAEGRTIEIANAGRVWRDFTYIDDIVEGVVRV 238 Query: 237 LKKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 L RI YNIG N+R EI L+ A+I + Sbjct: 239 LAAPPRPDPDWDSRAAAPATSSAPYRI---YNIG--NDRPE-----EINRLI-AIIETAL 287 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + PG + D S ++ +G+ P +E G+ + V WY D Sbjct: 288 GRRAVRVNVPLPPGDVLKTRADVSDLRGAVGFAPATALEDGVQRFVEWYRD 338 >gi|219683092|ref|YP_002469475.1| NAD-dependent epimerase/dehydratase [Bifidobacterium animalis subsp. lactis AD011] gi|219620742|gb|ACL28899.1| NAD-dependent epimerase/dehydratase [Bifidobacterium animalis subsp. lactis AD011] Length = 345 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 35/345 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++TG AGFIG L L++ I ++ +D L Y L L+ +++ F + Sbjct: 8 ILITGAAGFIGWNLAERLLHSYPDITIVGLDNLNDYYDVKLKEARLERLTKYPNLIFEKG 67 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D++ I ++ D +VN A++ V SI D ++++N+IG + +LE R Sbjct: 68 DLSDKKLIGRLFEKHHFDVVVNLGAQAGVRYSITNPDAYVSSNLIGFYNILEACR----- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG K FS ED NP S Y+ATK S++ + A+ Y Sbjct: 123 ----HNPVEHLVYASSSSVYGGNKKVPFSTEDKVDNPVSLYAATKKSNELMAHAYSKLYD 178 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP P+ +++ G + ++ G RD+ Y++D V + V Sbjct: 179 IPSTGLRFFTVYGPAGRPDMAYFGFTNKLLAGETIKIFNYGNCQRDFTYIDDIVEGIVRV 238 Query: 237 LKKG---RIGER---------YNIGGNNERKNIDIVFEIG--FLLDALIPKSY---SHTE 279 ++ + GE YNIG + +D V + + ++P Y +H E Sbjct: 239 IQGAPTRQTGEDGLPVPPYALYNIGCGHPENLLDFVTTLQEELIRAEVLPDDYDFEAHKE 298 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L+ +PG D+ + + G+ P ++ GL + WY Sbjct: 299 LVPM---QPGDVPVTYADTEALTRDYGYRPTTSLRDGLRRFAEWY 340 >gi|156743594|ref|YP_001433723.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234922|gb|ABU59705.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 325 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 35/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ +V +ID L+ G + +++ + FS+ +D Sbjct: 6 ILITGGAGFIGSHLADALIARGD-RVAIIDDLS-TGAVANIRHLKGHPNFSY-TLDTIAN 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + L + + DAIV+ AA V + I TN+ GT E L W+ K Sbjct: 63 EAVLAELID-ESDAIVHLAAAVGVQLIVQSPVRTIETNVNGT-----ELVLRWAA----K 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSED--MPYNPSS----PYSATKASSDYLVLAWGHTYG 176 K + L ST EVYG ++ F ED + PS+ Y+ +K ++L LA+ Sbjct: 113 KGKTVLLA-STSEVYGKSERIPFREDDDLVLGPSTMGRWSYACSKLLDEFLALAYHKERD 171 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +PV+++ N GP ++P + + + +YGDGQ R + YV D VRAL Sbjct: 172 LPVIIARLFNTVGPRQTGRYGMVLPRFVRAALRDVPLRVYGDGQQTRCFCYVGDTVRALI 231 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDRP 288 +L G +G+ +N+G E +++ + L + L+P Y H F ED Sbjct: 232 ALLDHPGAVGKIFNVGNPQEVSILELAQRVVRLARSSSPIVLVP--YEHAYEAGF-EDM- 287 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 RR D S++ + G+ P +++ + + + Sbjct: 288 ---RRRVPDISRLAALTGFRPTLDLDDIIRAVIAY 319 >gi|325107113|ref|YP_004268181.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324967381|gb|ADY58159.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 316 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 38/331 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ V+ +D ++G+ ++ + F ++ DI Sbjct: 6 ILVTGGAGFLGSHLCDRLIEQGN-DVICVDNF-FSGSKQNIAHLIGHPRFELIRHDI--- 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R E D + N A + + I T+ +G + L K Sbjct: 61 --VRPLFVEA--DQVYNLACPASPKAYQFNPIKTIKTSTVGMV----------NVLGLAK 106 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R L ST EVYG + E+ P P S Y K ++ L + + +G+ Sbjct: 107 RCSSRVLHTSTSEVYGDPEVHPQVEEYWGNVNPIGPRSCYDEGKRVAESLCMNYHLAHGL 166 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V + N YGP P+ +++ I + + G + LYGDG+ R + YV+D V L Sbjct: 167 EVRIVRIFNTYGPRMHPDDGRVVSNFIMQALRGEPLTLYGDGEQTRSFCYVDDLVDGLMR 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL--IRFIEDRPGHDRR 293 ++ + NIG E F + L +A++ + S +++ + +D P ++ Sbjct: 227 MMNQEETTGPVNIGNPGE-------FSMKELAEAVLAVTGSSSDITHVPLPQDDP---KQ 276 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K K +GW P+ + GL TV +Y Sbjct: 277 RCPDITKAKRILGWEPKTQLREGLEATVEYY 307 >gi|317125743|ref|YP_004099855.1| NAD-dependent epimerase/dehydratase [Intrasporangium calvum DSM 43043] gi|315589831|gb|ADU49128.1| NAD-dependent epimerase/dehydratase [Intrasporangium calvum DSM 43043] Length = 314 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIG+ L R L+ + V+ D LT G N+L+ ++ I Sbjct: 1 MKVVITGGAGFIGANLGRELLRRPGVDSVVAFDNLT-TGFRNNLEGTG----IELVEATI 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A DAIV+ AA V RS++ +N GT +L+ R Sbjct: 56 LDPAALDEACD--GADAIVHLAALPSVPRSVIDPIASHHSNATGTLEVLQAAR------- 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYG+ + E M P SPY+ +K +++ +A+GHTYG+P Sbjct: 107 --RAGGTHVVVASSSSVYGANRELPKRESMRTAPISPYAVSKQATEAYTIAFGHTYGLPT 164 Query: 180 LLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 L N YGP H ++P + + G + ++GDG+ RD+ YV R L Sbjct: 165 LAFRFFNVYGPLQAAGHAYAAVVPAFVDAALRGVPLSVHGDGEQTRDFTYVGTVARVLAD 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V + + N+ ++ E+ +L A + + +E R G R Sbjct: 225 AVTNQVADLDPVNLAFGTRTSLNGLIDELSLVLGA--------SPTVEHVEPRAGDVRDS 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S++ S ++ GL TV W+ Sbjct: 277 QADNSRLLSLFPDVKPVSLRDGLRATVDWF 306 >gi|30023477|ref|NP_835108.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|229130695|ref|ZP_04259650.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-Cer4] gi|29899038|gb|AAP12309.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|228652778|gb|EEL08661.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-Cer4] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLSRTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E RPG D+SK K E+GW +E + W +N Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEEMCADSWKWQSNN 331 >gi|78061717|ref|YP_371625.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] gi|77969602|gb|ABB10981.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] Length = 329 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 145/345 (42%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG+IGS C+ L + + D L+ G+ ++++ + DI Sbjct: 1 MKVLVTGGAGYIGSHTCKALAA-AGHEPVAYDNLS-TGHRDAVR------WGPLVTADIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + A +PD +++FAA ++V S+L D + T N+ GT +LL + Sbjct: 53 DRDALSKAFAAHRPDVVIHFAALAYVGDSVLAPDRYYTVNVTGTCMLLS---------AM 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-V 179 R + S+ YG D SE P P +PY TK + + + + YG+ V Sbjct: 104 HAAGVGRIVMSSSCATYGIPDGLPISERTPQRPINPYGFTKYAMERMAADFERAYGLKWV 163 Query: 180 LL-------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 L ++ G H PE +PLAI H F + G DG +RD++ Sbjct: 164 ALRYFNAAGADPDGEIGECHEPETHALPLAIRAAFGTGHAFQVMGADYPTPDGSAIRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++A + G N+G +D + + + +P + Sbjct: 224 HVSDLADAHLKATAYLCGGGH-SVALNLGTGKGTSVLDALRAVEAVTGRRVPTVTA---- 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++K +GW P +E + W+ Sbjct: 279 ----ARRPGDPPELYADATKAALVLGWRPSFTAIEPMVEHAAAWF 319 >gi|300811801|ref|ZP_07092272.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497217|gb|EFK32268.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 357 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 50/347 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV D V+V+D L + G+ ++ ++ F QVD+ Sbjct: 29 MKILVVGGAGYIGSHAVRRLVADGN-DVVVLDSL-FTGHKEAIDPKAK-----FYQVDLL 81 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL---EETRLWWSC 117 D++ + LK+ + +A+++FAA S V S+ ++ N+ G LL EET + + Sbjct: 82 DKDAVADVLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLV 141 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S S+ YG +K +E+ P NP +PY TK + ++ GI Sbjct: 142 FS------------SSAATYGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGI 189 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVR 221 V ++ + G H PE LIP + + G F ++G DG NVR Sbjct: 190 KSIALRYFNVAGASLDGSIGEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVR 249 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++V D + A L LK + + +N+G N++I+ + IP + Sbjct: 250 DYVHVVDLIDAHVLALKHLMETNQSDVFNLGTATGFSNLEILKAAIKVTGVDIPYTIG-- 307 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 308 ------PRRGGDPDSLVADSSKARKVLGWSPKYENVDDIIASAWNWH 348 >gi|326792042|ref|YP_004309863.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] gi|326542806|gb|ADZ84665.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] Length = 330 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 153/333 (45%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS + L + +I V+VID L G++ S+ SN+ F QVDI Sbjct: 1 MKILVVGGAGYIGSHAVKQLTEN-QIDVIVIDSLE-TGHIESVP----SNV-PFYQVDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 ++ ++ L++ + D +++FAA S V S+ ++ N+ GT LLE ET + + Sbjct: 54 NKSAVKEILEKEKVDGVIHFAANSLVGESMSNPLKYYNNNVGGTESLLEALVETGVKYIV 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG- 176 S ST YG + +EDM P++ Y TK + + + L W H Sbjct: 114 FS------------STAATYGEIATMPITEDMTTCPTNTYGETKLAIEKM-LKWTHGAHN 160 Query: 177 --------IPVLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNV 220 V ++ S G H E LIPL + + + SH+ ++G DG + Sbjct: 161 LNYVCLRYFNVAGADFSGTIGEAHTTETHLIPLILQVPLGQRSHITVFGQDYPTEDGTCI 220 Query: 221 RDWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++V D V A L LK G +N+G N+ ++++ + IP Sbjct: 221 RDYIHVTDLVNAHILALKYLMNGGESNIFNLGSNSGYSVLEMIEAARKVTGHPIP----- 275 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ E R G S K K +GW PQ Sbjct: 276 ---MQIGERRVGDPALLIASSEKAKRVLGWEPQ 305 >gi|51315934|sp|Q7WTB1|GALE_LACHE RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|31620907|emb|CAD55502.1| UDP-galactose 4-epimerase [Lactobacillus helveticus] Length = 330 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + VLV+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGN-DVLVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P NP +PY TK + ++AW GI Sbjct: 106 DANVKYLVFS-SSAATYGIPKKLPITEDTPLNPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ + G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGASSDGSIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK K + +N+G + N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K ++ +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTVLGWKPKHENVDDVIATAWKWH 320 >gi|330821072|ref|YP_004349934.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] gi|327373067|gb|AEA64422.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] Length = 349 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 41/338 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D VL +D Y G+ +++ + + F L+ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLLRDGH-DVLCVDNF-YTGSKDNVAPLLGAAHFELLRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ R LQ ST EVYG D E P P + Y K ++ L + Sbjct: 106 GLAKRTGARILQASTSEVYGDPDVHPQPEHYCGLVNPIGPRACYDEGKRCAETLFADYHR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ + ++ N YGP PE +++ IT+ I + +YGDG R + YV+D + Sbjct: 166 QYGVDIRIARIFNTYGPRMHPEDGRVVSNFITQAITERPITVYGDGCQTRSFCYVDDMIE 225 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ + G N+G + E I++ ++ + S S E D P Sbjct: 226 ALVRLMAEPGPAPRPVNLGSDEEVSMIEMARQV-----IRVTGSASAIEFRPLPVDDP-R 279 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 RR ++D ++ + E W + GL T ++++ N Sbjct: 280 QRRPSLDEARRRLE--WRAATPLADGLAHTARYFIERN 315 >gi|241895944|ref|ZP_04783240.1| possible UDP-glucose 4-epimerase [Weissella paramesenteroides ATCC 33313] gi|241870987|gb|EER74738.1| possible UDP-glucose 4-epimerase [Weissella paramesenteroides ATCC 33313] Length = 310 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 26/319 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + V + V+++D L+ + S + I S+ F Q I D Sbjct: 5 ILVTGGAGFIGSHVVERHVKEGN-NVIIVDDLS----MGSRENIVNSDHVIFYQKSITDY 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + LK++ + I AA + V +I E N ++E R+ +K Sbjct: 60 EFMSYLLKKYNFNVIYLLAAIASVADTIKRPYESHQVNQEANLFIMETLRI-------NK 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R L S+ YG+L K ED P++PY+ K +++ +L + H Y IP + Sbjct: 113 LFPERVLFSSSAATYGALPKLPKKEDGAVLPATPYAIDKYATERYILTYAHLYNIPTVAV 172 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YGP P+ ++ + + + L+GDG RD++Y++D + AL L Sbjct: 173 RFFNVYGPRQNPKSPYSGVLSIVSHCLKQNVKFSLFGDGLQTRDFIYIKDVISALKLAET 232 Query: 239 KGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + IG+ +N+ + +D + ++ + S ++ +F E R G R D Sbjct: 233 TDKMIGDVFNVATGSSHTLLDAIADLEMV-------SGKKLQIKKF-EPRIGDIRDSKAD 284 Query: 298 SSKIKSEIGWFPQENMESG 316 SK+KS G+ P+ G Sbjct: 285 ISKLKS-FGFRPKYTFSEG 302 >gi|253989507|ref|YP_003040863.1| Nucleotide sugar epimerase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780957|emb|CAQ84119.1| Nucleotide sugar epimerase [Photorhabdus asymbiotica] Length = 337 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+ + +V+ +D L Y NL L + S+ F F + Sbjct: 1 MKFLVTGAAGFIGFHVSQRLLQ-MGHEVVGLDNLNDYYDVNLKQARLDLLFDSSGFKFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR I + + Q +++ A++ V S+ +I +NIIG +LE R Sbjct: 60 LDLADRIAIPALFERHQFQRVIHLGAQAGVRYSLQNPMAYIDSNIIGHINILEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L S+ VYG K FS D +P S Y+ATK S + + ++ H Y Sbjct: 116 -----HNNVEHLLYSSSSSVYGLNRKQPFSTNDSVDHPISLYAATKKSDELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y G VRD+ Y++D V ++ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAMLSGQPIDVYNHGNMVRDFTYIDDIVESIVR 230 Query: 236 ------------VLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V++ G+I YNIG + +G ++A I +S Sbjct: 231 LQGIIPAPNESWVVEDGQISASSAPYCIYNIGNGQPTR-------LGDFIEA-IEESLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 F+ + G DSS I +IG+ P ++ G+ + V WYL Sbjct: 283 QAKKNFMPMQDGDVLSTCADSSDIFQKIGFSPNTSVRHGVKQFVEWYL 330 >gi|254513947|ref|ZP_05126008.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium NOR5-3] gi|219676190|gb|EED32555.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium NOR5-3] Length = 337 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 15/244 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 MR++VTG AGFIG L L+N+ V+ +D L Y+ L + L ++ F F+Q Sbjct: 1 MRVLVTGAAGFIGFHLSHRLLNEGH-DVVGLDNLNDYYSVQLKRDRLAQLQAREGFQFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + DA++N AA++ V S+ +I++NI G +LE R Sbjct: 60 LDLEDRQAMEKLFADQALDAVINLAAQAGVRYSLENPRAYISSNIDGFMNVLECCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG + FS D +P S Y+ATK S++ + + H Y Sbjct: 116 -----HANTSHLIYASSSSVYGMNTRMPFSVHDNVDHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ YGP+ P+ + L ++ G + ++ GQ RD+ Y++D V + Sbjct: 171 GLRTTGLRFFTVYGPWGRPDMALFLFTKAILAGEPIKVFNQGQMRRDFTYIDDIVEGITR 230 Query: 236 VLKK 239 +L K Sbjct: 231 LLAK 234 >gi|118581806|ref|YP_903056.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] gi|118504516|gb|ABL00999.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] Length = 346 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 151/346 (43%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 R++VTG AGFIG L R+L+ + QV+ +D L Y L L+ + FSFL+ Sbjct: 11 RVLVTGAAGFIGFHLSRHLL-EQGYQVIGLDNLNDYYDQTLKEARLRLLEPLPGFSFLRA 69 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + + D +VN AA++ V SI +I++N+ G +LE C Sbjct: 70 SLEDARQMEELFSRERFDLVVNLAAQAGVRYSITNPHAYISSNVAGFLNVLE------GC 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG+ + FSE + P S Y+ATK S++ + + H +G Sbjct: 124 RHTGVK---HLVFASSSSVYGANARVPFSEHHTVDHPVSLYAATKKSNELMAHTYAHLFG 180 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + YGP+ P+ ++EG + ++ G+ RD+ Y++D V+ + V Sbjct: 181 LATTGLRFFTVYGPWGRPDMAYFSFTKAILEGRAIDVFNHGRMRRDFTYIDDIVQGIARV 240 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L++ G+ YNIG N E+G ++ L + Sbjct: 241 LERPPQGDAAWDANAPDPASSSAPYRIYNIGNNRP-------VELGRFIETL-EQLLGKK 292 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + + G+ P +E+GL + V WY Sbjct: 293 AIKNMLPMQPGDVPATCADIDDLARDAGFRPSTPIETGLRRFVEWY 338 >gi|294635572|ref|ZP_06714050.1| UDP-glucuronate 5'-epimerase [Edwardsiella tarda ATCC 23685] gi|291091070|gb|EFE23631.1| UDP-glucuronate 5'-epimerase [Edwardsiella tarda ATCC 23685] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIG+ LC L+ QV ID L ++ SLK+ + L F++ Sbjct: 1 MRILVTGCAGFIGANLCGRLLA-AGHQVEGIDNLNDYYDV-SLKQARLAPLQADANFTYH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +DI D E + + D +V+ AA++ V S+ + +N++G +LE R Sbjct: 59 PIDIADSEAMAALFGTRHFDRVVHLAAQAGVRYSLTNPLSYAQSNLLGHVNVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG +K FS +D +P S Y+ATK S++ + ++ H Sbjct: 116 ------HGKVGHLVYASSSSVYGLNNKVPFSTDDRVDHPVSLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ + M+ G + +Y G RD+ Y++D V + Sbjct: 170 YGLPTTGLRFFTVYGPWGRPDMALFKFTKNMLAGQPIDIYNHGDMQRDFTYIDDIVEGVL 229 Query: 235 LVLKKG-------RIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +++ R+ + YNIG + + +D + + ++ Sbjct: 230 RIMEVVPQPNPDWRVEQDSPAASSAPYRVYNIGHGSPVRLMDYI--------TALEEALG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L F+ +PG + D+ + + G+ PQ +++G+ V WY Sbjct: 282 IEALKNFMPMQPGDVYQTYADTEDLFAATGYCPQVGVKAGVQAFVDWY 329 >gi|259908300|ref|YP_002648656.1| UDP-sugar epimerase [Erwinia pyrifoliae Ep1/96] gi|224963922|emb|CAX55426.1| UDP-sugar epimerase [Erwinia pyrifoliae Ep1/96] gi|283478235|emb|CAY74151.1| DNA topoisomerase III [Erwinia pyrifoliae DSM 12163] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+N QV+ +D L Y NL + L I+Q F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVTQRLLN-AGHQVVGLDNLNDYYDVNLKTARLAHIAQHASFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE + + + +++ A++ V S+ + N++G +LE R Sbjct: 60 GDLADREGMAELFRCHRFQRVIHLGAQAGVRYSLENPLAYADANLVGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG + FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HNQVEHLLYASSSSVYGLNRQMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + MI G + +Y GQ RD+ Y++D V +++ Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTRAMIAGEKIDVYNHGQMRRDFTYIDDIVESIFR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ YNIG + + + + L + K+ Sbjct: 231 LQDVTPQADKDWTVEAGSPATSSAPYRVYNIGNSQPVTLMTYIEALESALGTVADKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G + D+ + IG+ PQ ++E G+ + V WY Sbjct: 288 -----MLPMQAGDVVETSADTRALYEVIGFKPQTSVEEGVARFVSWY 329 >gi|239616609|ref|YP_002939931.1| NAD-dependent epimerase/dehydratase [Kosmotoga olearia TBF 19.5.1] gi|239505440|gb|ACR78927.1| NAD-dependent epimerase/dehydratase [Kosmotoga olearia TBF 19.5.1] Length = 313 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 28/326 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ + + +VID L+ +G + +L + F Q DI D Sbjct: 4 IVVTGGAGFIGSHVVNELI-EKNMGPIVIDNLS-SGKIENLDPRAL-----FYQQDITDL 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + +P + + AA+ V +S+ E NI+GT LL + + Sbjct: 57 EMMERVFMLHKPRYVFHLAAQISVSQSVKDPIEDARINILGTLNLLNLSVKYGV------ 110 Query: 123 KDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++F F + +YG + + SE P SPY K S + + + YG+ + Sbjct: 111 -EKFIFSS-TGGAIYGDDVSEIPTSEKEFPKPFSPYGIAKFSVENYLRFYSEQYGLKYVA 168 Query: 182 SNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YG P ++ + RM+ V ++GDG+NVRD++Y D A L ++ Sbjct: 169 LRYANVYGERQDPHGEAGVVAIFSKRMLANDEVIIFGDGENVRDYVYAGDVAHANVLAME 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 K E NI G +++ +F AL+ + + + + + RPG R+ + Sbjct: 229 KVE-NEVINI-GTGIGTSVNELF-------ALLKEITGYQKEPVYADPRPGDLRKSILKW 279 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 K K +GW P +E GL KTV ++ Sbjct: 280 DKAKELMGWEPTVKLEDGLVKTVEFF 305 >gi|125972751|ref|YP_001036661.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|256005670|ref|ZP_05430627.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281416950|ref|ZP_06247970.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|125712976|gb|ABN51468.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|255990358|gb|EEU00483.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281408352|gb|EFB38610.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|316941011|gb|ADU75045.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 339 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 53/351 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----------SQSNLF 52 ++VTG AGFIG L + L+ + V+ ID NLN ++ S++ F Sbjct: 5 ILVTGAAGFIGFHLVQRLLKE-GCNVVGID------NLNEYYDVKLKKDRLKLLSENKNF 57 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F +VDI +++ + + ++P ++N AA++ V SI ++ +N++G +LE R Sbjct: 58 VFRKVDIKNKKAVDRIFETYRPSYVINLAAQAGVRYSIENPYAYVDSNLVGFVNILEACR 117 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 K + S+ VYG FS + P S Y+ATK S++ L + Sbjct: 118 ---------KYPVKHLIYASSSSVYGGNKVSPFSTRHNVDHPVSLYAATKKSNELLAHTY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H +GIP YGP+ P+ ++ G+ + ++ G+ RD+ Y++D V Sbjct: 169 SHLFGIPTTGLRFFTVYGPWGRPDMAYFSFTKDILSGNPIKVFNYGKMERDFTYIDDVVE 228 Query: 232 ALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + ++ + YNIG NN ++ + + L + K Sbjct: 229 GIVKLIDRIPTPNENWDETKDDISTSFAPYKIYNIGNNNPVPLMNFISVLESALGKVAKK 288 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 Y ++ +PG R D S ++ +I + P ++E GL K V WY Sbjct: 289 VY--------LDLQPGDVLRTYADISDLERDINFKPSTSIEDGLRKFVQWY 331 >gi|254467155|ref|ZP_05080566.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I] gi|206688063|gb|EDZ48545.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium Y4I] Length = 343 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 57/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVD 58 ++VTG +GFIG LCR L++D +V+ ID L+ Y+ L ++ + Q FS + Sbjct: 6 VLVTGSSGFIGYHLCRRLLDD-GFRVVGIDNLSDYYSVQLKRDRQAMLEQHPDFSVINRS 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + SA +E +PD +V+ AA++ V SI ++ +NI GTF +LE R Sbjct: 65 IEDPGVVLSAFEEHKPDYVVHLAAQAGVRYSIENPRSYLESNITGTFEILEAAR------ 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST +G+ + +MPY + S Y+A+K +++ + ++ Sbjct: 119 ---AHPPRHMLLASTSSAFGA------NTEMPYKETQKADHQMSFYAASKKATENMAHSY 169 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + +PV + YGP+ P+ + ++ G + +Y G RD+ Y+ D V Sbjct: 170 AHLFDLPVTMFRFFTVYGPWGRPDMALFKFTKAILAGQPIDVYNYGGMQRDFTYITDLVE 229 Query: 232 ALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 A+ L++ + ER NIG + + D + A + Sbjct: 230 AVRLLMDA--VPERPADEAVPEGDSLSPVAPHRVINIGNSEPVQLNDFI--------AAV 279 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T + + G D+S ++ G+ PQ + G+ + V WY Sbjct: 280 ETATGRTAERNLMPMQAGDVPATWADASLLRRLTGYTPQTGVAEGVAQFVEWY 332 >gi|218900580|ref|YP_002448991.1| UDP-glucose 4-epimerase [Bacillus cereus G9842] gi|218540895|gb|ACK93289.1| UDP-glucose 4-epimerase [Bacillus cereus G9842] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENVIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHT-Y 175 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 GI +L ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 GIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL V+ + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVMSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEE-----MC---ADSWKWQ 328 >gi|116749620|ref|YP_846307.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116698684|gb|ABK17872.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 312 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 31/326 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG+ L R L + +++ V+D L+ AG L F+Q DI D Sbjct: 8 LITGGAGFIGTNLIRRL-SIPSVRIRVLDNLS-AGRREDLDGFD----VEFVQGDIQDAG 61 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ + +++ AA ++V +S+ + + N+ GTF LL + + Sbjct: 62 AVHRAVAGAR--KVIHLAANTNVVQSVANPELNLDVNVRGTFNLLRAS-------VEHGV 112 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK-ASSDYLVLAWGHTYGIPVLLS 182 ++F F + + G + + EDMP NP SPY A+K A Y WG YG+P + Sbjct: 113 ERFVFAS-TGGAIVGDVTPPV-HEDMPPNPISPYGASKLAGEGYCSAFWG-AYGLPTVSL 169 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG- 240 SN YGP+ + + + R ++ G + +YGDG+ RD+L+V D + + L+ Sbjct: 170 RFSNIYGPFSYHKGSVIAKFFREVQAGKPLTIYGDGEQTRDFLFVGDLCQGIARALEAPL 229 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--ELIRFIEDRPGHDRRYAIDS 298 G +G E +V AL+ ++ + + R G R + + Sbjct: 230 PFGGSIQLGSGRETTVNSMV--------ALMREAVGGDWFPPVTYAPPRAGEVLRNYVST 281 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + + + P ++ SGL +T W+ Sbjct: 282 ARAEKYLDFSPATDLPSGLTETWKWF 307 >gi|229136276|ref|ZP_04265023.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST196] gi|228647148|gb|EEL03236.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST196] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ + +++V+D L+ + ++N + EI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLKN-GYEIIVVDNLSNSSVESINRVTEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 ILNREALDTIFEENTIEAVIHFAGFKAVGESVEIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K D + + S+ VYG + +E+ P + ++PY TK + ++ +A+ G Sbjct: 110 VMQKHDVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADA-G 168 Query: 177 IPVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQN 219 + L N +G P P L+P +A+ ++ E S + + DG Sbjct: 169 WSIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLEELSVFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 229 VRDYIHVVDLANGHVKALEKVLGTTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 -----YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|159902005|gb|ABX10735.1| UDP-glucuronic acid epimerase [uncultured planctomycete 13FN] Length = 337 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/340 (22%), Positives = 153/340 (45%), Gaps = 31/340 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTG AGFIG L++ + +V D + + LK++ + F F +V Sbjct: 3 KILVTGAAGFIGFHTATKLLDRGDVDDGLDIVNDYYQVSLKHDRLKQLEGRDGFQFAKVA 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + D++++ AA++ V S+ ++ N++G +LE R Sbjct: 63 LEDRDAVNGVFERHGFDSVIHLAAQAGVRYSLENPQAYVDANLVGFVNILEACR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +K + S+ VYG+ +K L D +P S Y+A+K +++ + + H +G+ Sbjct: 117 -HNKVGHLAYA--SSSSVYGANKNKPLRVTDRVDHPVSLYAASKKANELMAHTYSHLFGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 P YGP+ P+ + L +++G + ++ G+ RD+ YV+D V + V Sbjct: 174 PTTGLRFFTVYGPWGRPDMALWLFTEAILKGESINVFNHGKMRRDFTYVDDIVEGVIRVN 233 Query: 237 ------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + YNI + +D+++ I ++ K+ T + Sbjct: 234 DNVPQPTPDKDPMDDSTTSAPYNIYNIGNNQPVDLMYMI-----EVLEKAIGRTANKNMM 288 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D ++ ++G+ P +E+G+ + V WY Sbjct: 289 DIQPGDVPETFADIDALQRDVGFKPDTPIETGIERFVAWY 328 >gi|90020265|ref|YP_526092.1| oligopeptide transporter OPT [Saccharophagus degradans 2-40] gi|89949865|gb|ABD79880.1| NAD-dependent epimerase/dehydratase [Saccharophagus degradans 2-40] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 155/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGN--LNSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L L+ V+ ID + Y N L L+ +++ F F + Sbjct: 1 MKVLVTGAAGFIGYHLSERLLARGD-TVVGIDNINDYYDPNIKLARLERLNKHEAFEFQK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + Q D +VN AA++ V SI ++ +NI+G +LE R Sbjct: 60 LDLADRGGMETLFSNHQFDRVVNLAAQAGVRYSIENPHAYVDSNIVGFLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ FSE + P + Y+A+K +++ + ++ Y Sbjct: 116 -----HTNVPHLSYASSSSVYGANTLQPFSEHHNVDHPVALYAASKKANELMAHSYSSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L ++EG + ++ +G+ RD+ Y++D + + Sbjct: 171 KLPTTGLRFFTVYGPWGRPDMALFLFTKGILEGKPINIFNNGEMYRDFTYIDDIIEGVVR 230 Query: 236 VLKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V K G++ YNIG NN K +D V I L K+ Sbjct: 231 VTNKIAEPNPLWTGDKPDPATSYAPFKVYNIGNNNPVKLMDFVEAIENELGIKAIKNMMP 290 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D PG + D + ++G+ P+ ++ G+ + V WY Sbjct: 291 MQ----AGDVPG----TSADVQSLMDDVGFKPEITVQQGIKQFVGWY 329 >gi|332534344|ref|ZP_08410187.1| capsular polysaccharide biosynthesis protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036254|gb|EGI72727.1| capsular polysaccharide biosynthesis protein [Pseudoalteromonas haloplanktis ANT/505] Length = 334 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 29/343 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+A C+ L+ + V+ ID L Y NL L + F+F++ Sbjct: 1 MKYLVTGAAGFIGAATCQKLLAAGHV-VVGIDNLNNYYDVNLKLARLAQFESHEAFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI +R + K Q D +++ AA++ V SI D + +N++G +LE Sbjct: 60 LDISERPAMSELFKTQQFDKVIHLAAQAGVRYSIENPDAYADSNLVGHLNVLE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG +K F + D +P S Y+ATK +++ + ++ H Y Sbjct: 114 CRNTKVK---HLVYASSSSVYGLNEKTPFETTDSVDHPMSFYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + +++ G + + +G RD+ Y++D V + Sbjct: 171 SLPTTGLRFFTVYGPWGRPDMAPYIFTKKILAGDTIDINNNGDMWRDFTYIDDIVEGVVR 230 Query: 236 ---VLKKGRIGERYNIGGNNERKNIDIVFEIGF--------LLDALIPKSYSHTELIR-F 283 V+ R G V+ IG ++A+ ++ TE + F Sbjct: 231 AADVIPAANPDWRVETGSPASSSAPYAVYNIGHGSPINLMKFIEAI--EAELGTEAKKNF 288 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E + G + D++ + + G+ Q ++ G+++ + WY D Sbjct: 289 REMQAGDVYKTYADTTDLFNATGYKAQVGVKQGVSELIKWYKD 331 >gi|225851277|ref|YP_002731511.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Persephonella marina EX-H1] gi|225646010|gb|ACO04196.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1) [Persephonella marina EX-H1] Length = 314 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 37/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TG AGFIGS LC + + V+ +D G+ +++ + F F++ D+ Sbjct: 1 MKVLITGAAGFIGSHLCDRFLKE-GFYVIGLDNFL-TGSPDNIAHLFGEENFKFIKYDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D +++FA + + + + +GT L Sbjct: 59 NYIYVPDDI-----DLVLHFACPASPVDYLQHPIHTMKVDSLGTL----------HTLGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K + R++ ST E+YG E P P S Y K S+ + +A+ + Sbjct: 104 AKAKKARYIFASTSEIYGDPQVHPQPETYWGNVNPIGPRSVYDEAKRFSEAMTMAYHREH 163 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 I V + N YGP +++P I++ + G + +YGDG R + Y++D V + Sbjct: 164 HIDVRIVRIFNTYGPRMRLNDGRVVPNFISQALRGEDLTVYGDGSQTRSFCYIDDLVEGI 223 Query: 234 YLV-LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 + V +K+G GE +N+G +E + ID +I K+ S + ++ ED P Sbjct: 224 FRVSVKEGIEGEVFNLGNPDEYRIIDFA-------KIIIEKTGSRSGIVFRPLPEDDP-- 274 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D +K K +GW P+ +++ GL T+ ++ Sbjct: 275 -RQRCPDITKAKEVLGWEPKVSLDEGLENTIQYF 307 >gi|146304571|ref|YP_001191887.1| NAD-dependent epimerase/dehydratase [Metallosphaera sedula DSM 5348] gi|145702821|gb|ABP95963.1| NAD-dependent epimerase/dehydratase [Metallosphaera sedula DSM 5348] Length = 302 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 53/337 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +V GGAGF+GS L L D + V+D L+ A + Q Sbjct: 1 MKYLVIGGAGFLGSHLIESLSGD----ITVVDDLSTA---------------KYFQ---G 38 Query: 61 DRECIRSALKEFQPDA----IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + IR ++ F D +++ AA + I E +N +GT+ LE R Sbjct: 39 NAKLIREKIENFSTDEKYDYVIHLAARPSPEDYINHPVETALSNSVGTYKALEIAR---- 94 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + FL S+ E+YG + + + + P S Y +K S+ L++++ Sbjct: 95 ------RSDAVFLYTSSSEIYGHAEVIPTPESYWGKVNPTGVRSCYDESKRFSEALIMSF 148 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 YG+ V + N YGP + ++I + + + G + ++GDG R +LYV Sbjct: 149 YREYGLDVRIQRPFNVYGPRLREDGSYGRVISRFVYQALRGEDLTIFGDGNQTRAFLYVS 208 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 D V A +L G G N+G + E K ID L +I + S + L +F+ R Sbjct: 209 DWVEATKRMLGPGLKGVILNVGSDKETKIID-------LAKTIISMTGSKSGL-KFLPPR 260 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A D +K K +GW P+ ++ GL T+ W+ Sbjct: 261 QDDPPRRAADITKAKEVLGWEPKVSLFEGLKMTIEWF 297 >gi|291004934|ref|ZP_06562907.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 333 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 37/336 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVDI 59 R VTGGAGF+GS LC LV +VL +D L AGN+ +L+ + ++ Sbjct: 17 RAAVTGGAGFLGSHLCERLVA-AGTEVLCLDNLVTGSAGNVEALR--------GDPRFEL 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + RS + D +V+ A+ + + + E + GT LE Sbjct: 68 VDHDIARSPVHAGGIDLVVHMASPASPEHYLRLPLETLRAGSAGTEHALELA-------- 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 +++ RFL +ST EVYG + SE+ P P S Y K ++ L A Sbjct: 120 --ERNGARFLLVSTSEVYGDPLEHPQSEEYWGNVNPIGPRSVYDEAKRYAEALTSAHRSC 177 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G ++ N YGP P+ +++P + + + G + + GDG R YV D VR Sbjct: 178 RGTDTRIARVFNTYGPRMRPDDGRMVPTFVRQALAGEPITVAGDGTQTRSLCYVGDTVRG 237 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L L + G NIG +E V + L+ L + T + ++D + Sbjct: 238 L-LGVAAGDWPGPVNIGNPDEL----TVRGLAELVRELAGSASPITHVPAVVDD----PK 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R D + E+ W P + GL +T+ W+ N Sbjct: 289 RRCPDIGLAERELDWRPATSTREGLLRTIMWFQRNQ 324 >gi|307825876|ref|ZP_07656092.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307733184|gb|EFO04045.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 340 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 30/344 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L +++ ++++ D L G+ +L + F F DI Sbjct: 1 MKLLITGGCGFLGSNLAEDALSNGN-ELIIFDSLYRDGSRENLAWLQGQGNFRFEHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 ++ I ++ F+PD I + A + + SI N+IGT LLE RL+ Sbjct: 60 NQNDITRVVQLFKPDVIFHLAGQVAMTTSIANPRMDFEVNVIGTHNLLEAVRLYAPDATV 119 Query: 115 -WSCLSQDKKDQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 +S ++ D ++ TD Y +D+ F E P SPY +K ++D +L + Sbjct: 120 VYSSTNKVYGDLEQYTYQETDTRYECIDRPNGFDEKTPLEFHSPYGCSKGAADQYMLDYA 179 Query: 173 HTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVF------LYGDGQNVRDW 223 +G+ ++ S+ YG F + + + IE + G G+ VRD Sbjct: 180 RIFGLKTVVFRHSSMYGGRQFATYDQGWVGWFCQKTIEAKQAVAKEPFTISGTGKQVRDV 239 Query: 224 LYVEDHVRALYLVLKKGRI----GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 L+ +D R LY+ G I G +NIGG E + + I Y++ Sbjct: 240 LHADDMKR-LYMA-AVGNIDQVKGHAFNIGGGIENSLSLLELFSLLEKISNIKLDYTNLP 297 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + R R + D +K K + W P + + G+ + V W Sbjct: 298 V------RESDQRVFVADFAKAKQLLNWQPVISAQEGVARMVEW 335 >gi|134102031|ref|YP_001107692.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|133914654|emb|CAM04767.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 323 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 37/336 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVDI 59 R VTGGAGF+GS LC LV +VL +D L AGN+ +L+ + ++ Sbjct: 7 RAAVTGGAGFLGSHLCERLVA-AGTEVLCLDNLVTGSAGNVEALR--------GDPRFEL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + RS + D +V+ A+ + + + E + GT LE Sbjct: 58 VDHDIARSPVHAGGIDLVVHMASPASPEHYLRLPLETLRAGSAGTEHALELA-------- 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 +++ RFL +ST EVYG + SE+ P P S Y K ++ L A Sbjct: 110 --ERNGARFLLVSTSEVYGDPLEHPQSEEYWGNVNPIGPRSVYDEAKRYAEALTSAHRSC 167 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G ++ N YGP P+ +++P + + + G + + GDG R YV D VR Sbjct: 168 RGTDTRIARVFNTYGPRMRPDDGRMVPTFVRQALAGEPITVAGDGTQTRSLCYVGDTVRG 227 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L L + G NIG +E V + L+ L + T + ++D + Sbjct: 228 L-LGVAAGDWPGPVNIGNPDEL----TVRGLAELVRELAGSASPITHVPAVVDD----PK 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R D + E+ W P + GL +T+ W+ N Sbjct: 279 RRCPDIGLAERELDWRPATSTREGLLRTIMWFQRNQ 314 >gi|116253418|ref|YP_769256.1| UDP-glucuronate 5'-epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115258066|emb|CAK09166.1| putative UDP-glucuronate 5'-epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 85/351 (24%), Positives = 150/351 (42%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-----L 55 MR +TG AGFIG L R L+ + V D LT N+ LKE+ + L F + Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-DVTGFDGLTPYYNVK-LKEMRHAALSQFPAFKPV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR + +A+ +PD +++ AA++ V S+ + ++ +N+ G+ W Sbjct: 59 IAMLEDRPALEAAVLAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 109 NILEIARRVEIRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP YGP+ P+ + M+ G + +YG+G RD+ Y++D + A+ Sbjct: 169 LHKIPTTAFRFFTVYGPWGRPDMALFKFTKNMLAGQPIEIYGEGNMSRDFTYIDDLIEAI 228 Query: 234 YLV------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + L + NIGG +D V + K+ Sbjct: 229 VRLSAVVPSEENRLENTAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKAL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R + + G+ P ++ G+ V WYLD Sbjct: 281 GRPAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVKAFVDWYLD 331 >gi|229007528|ref|ZP_04165123.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] gi|228753666|gb|EEM03109.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] Length = 342 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 54/343 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ ++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILVTGGAGYIGSHTCVELLNN-GYDIIVVDNLSNSSVESLNRVKEITGKQ-FKFYEEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ I KE +A+++FA V S+ + NI T IL C Sbjct: 59 LLNRDAIDVIFKENTIEAVIHFAGLKAVGESVAIPLTYYHNNITSTLIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 + + + + S+ VYG + +E+ P N ++PY TK A S++ Sbjct: 110 VMQRHNVKKMIFSSSATVYGLPETSPITEEFPLNATNPYGQTKLMIEQMMRDVVVADSEW 169 Query: 167 --LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYG 215 ++L + + +G ++ S G P P L+P +A+ ++ E S + + Sbjct: 170 SVVLLRYFNPFG-----AHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTK 224 Query: 216 DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V D HV+AL VL + + YN+G +++V + + Sbjct: 225 DGTGVRDYIHVVDLANGHVKALEKVLHTTGV-DTYNLGTGTGYSVLEMVQAFEKVSGKSV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P + E RPG D+SK K E+GW + +E Sbjct: 284 P--------YKITERRPGDVAVCFADASKAKRELGWEAKRGLE 318 >gi|229035094|ref|ZP_04189041.1| UDP-glucose 4-epimerase [Bacillus cereus AH1271] gi|228728279|gb|EEL79308.1| UDP-glucose 4-epimerase [Bacillus cereus AH1271] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 167/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ +++V+D L+ + ++N +KE++ F F + D Sbjct: 1 MAVLVTGGAGYIGSHTCVELLNN-DYEIIVVDNLSNSSVESINRVKELTGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + +E +A+++FA V S+ + NII T +L C Sbjct: 59 LVNYEALNKIFEENTIEAVIHFAGLKAVGESVAKPLTYYHNNIISTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWG-HTY 175 K++ + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 110 VMQKRNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQMMRDVAFADEEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 I +L ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGENPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G I+++ + +P Sbjct: 230 RDYIHVVDLAQGHVKALEKVLNTTGV-DAYNLGTGTGYSVIEMIEAFEKVSCKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|269138557|ref|YP_003295257.1| putative nucleotide sugar epimerase [Edwardsiella tarda EIB202] gi|267984217|gb|ACY84046.1| putative nucleotide sugar epimerase [Edwardsiella tarda EIB202] gi|304558572|gb|ADM41236.1| putative nucleotide sugar epimerase [Edwardsiella tarda FL6-60] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIG+ LC L+ QV ID L ++ SLK+ + L F++ Sbjct: 1 MRVLVTGCAGFIGANLCGRLLA-AGHQVEGIDNLNDYYDV-SLKQARLAPLQADANFTYH 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +DI D + + D +V+ AA++ V S+ + +N++G +LE R Sbjct: 59 PIDIADSAAMAALFSAAHFDRVVHLAAQAGVRYSLTNPLSYAQSNLLGHVNVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG +K FS D +P S Y+ATK S++ + ++ H Sbjct: 116 ------HGKVGHLVYASSSSVYGLNNKVPFSTADRVDHPISLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ + M+EG + +Y G RD+ Y++D V + Sbjct: 170 YGLPTTGLRFFTVYGPWGRPDMALFKFTKNMLEGKPIDIYNHGDMQRDFTYIDDIVEGVL 229 Query: 235 LVL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 ++ ++G YNIG + + +D I L +AL ++ Sbjct: 230 RIMEVVPQPNADWRVEQGAPAASSAPYRIYNIGHGSPVRLMDY---ITALEEALGIEALK 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 H F+ +PG + D+ + + G+ PQ +++G+ V WY D Sbjct: 287 H-----FMPMQPGDVYQTYADTEDLFAVTGYRPQMGVKAGVQAFVNWYRD 331 >gi|256371805|ref|YP_003109629.1| NAD-dependent epimerase/dehydratase [Acidimicrobium ferrooxidans DSM 10331] gi|256008389|gb|ACU53956.1| NAD-dependent epimerase/dehydratase [Acidimicrobium ferrooxidans DSM 10331] Length = 312 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 52/328 (15%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGG+GFIG+A+ R L ++V ++D+ N +E+ F++ I Sbjct: 9 IVTGGSGFIGTAVARAL-RARGVRVAIVDR-----NAPQHRELD-----VFVKGAIEHER 57 Query: 64 ---CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L A+ +FAA + V +S+ + +N++G LE R Sbjct: 58 TWLALATELAGEHVRALYHFAARTSVLQSVNDPHDVFVSNLVGYENALEFAR-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + L ST+ V G+ D G SE P P +PY ATKA+ + L A+ +YGI V Sbjct: 110 -THEVASVLFASTNAVVGAGDSGTISERSPLAPLTPYGATKAAGEMLGSAYAASYGIHVA 168 Query: 181 LSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP +H + ++P + ++ S +YGDG+ VRD++Y+ D V A + + Sbjct: 169 SVRLTNVYGPGMWH-KDSIVPRLLRHVVGLSEATIYGDGEQVRDFVYIGDVVDAFVRLEE 227 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +G + F G S S EL+ + D GH+ R Sbjct: 228 LGFVGA--------------VSFGSG--------TSVSVNELVDLVGDVTGHELRL---- 261 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ G P +++ L +++ D Sbjct: 262 RHVPAKAGEMPGVSVDLSLARSLGLKAD 289 >gi|150020317|ref|YP_001305671.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] gi|149792838|gb|ABR30286.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] Length = 326 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 156/347 (44%), Gaps = 52/347 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS +C+ L N+ V+VID L+ N KE ++ F+ DI Sbjct: 1 MNVLVAGGAGYIGSHVCKKL-NEKGYHVIVIDNLS-----NGHKEFAKYG--EFILGDIS 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + DA+++F A V S++ ++ N+ T +LL S L Sbjct: 53 DKKLLEIVFSNYHIDAVMHFCAYIEVGESVVNPHKYYENNVSSTLVLLH------SMLKH 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K +F+ ST +YG +K ED P NP +PY +K + ++ + YG+ + Sbjct: 107 NIK---KFIFSSTAAIYGLPNKIPIKEDAPKNPINPYGKSKYMVEEILDDFDKAYGLKSI 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + M + ++G DG +RD++ Sbjct: 164 RFRYFNAAGADESGEIGEAHNPETHLIPLILDAAMGRRESIKIFGTDYDTKDGTCIRDFV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++ L +L + + + +N+G GF + +I K T + Sbjct: 224 HVNDLADAHIKGLEYLLSENKT-DYFNLGSGE-----------GFSVKEVIEKVKEITNV 271 Query: 281 IRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +E+ RPG D+ K K + W ++E + W+ Sbjct: 272 DFKVEETDRRPGDPAYLIADNKKAKDILSWKINYSLEDIIKTAWNWH 318 >gi|94264695|ref|ZP_01288476.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] gi|93454861|gb|EAT05108.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] Length = 344 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 151/340 (44%), Gaps = 36/340 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQVD 58 ++TG AGFIGS L L+ L QV +D N SL +Q FSF++ D Sbjct: 19 LITGVAGFIGSNLLETLLK-LNQQVTGLDNFATGHQRNLDEVQSLVSPAQWANFSFIEGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLWW 115 I D R A + D +++ AA V RS+ ++ ITTN I G +L R Sbjct: 78 IRDPATCRRACRG--SDYVLHQAALGSVPRSL---EDPITTNGANIDGFLNMLVAAR--- 129 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ ++ YG ED P SPY+ TK ++ + Y Sbjct: 130 ------DAEVKRFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNELYAEVFARCY 183 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 P + N +G PE +IP I MI+ VF+ GDG+ RD+ Y+++ V+ Sbjct: 184 NFPSIGLRYFNIFGRRQDPEGAYAAVIPKWIAAMIQNETVFINGDGETSRDFCYIDNAVQ 243 Query: 232 ALYLVLKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-- 286 L + + YN+ ER +++ +++ L D L P SY H + + Sbjct: 244 VNLLAATSPNLEAANQVYNV-AVGERTSLNQLYQ--HLRDHLAP-SYPHLQNAQASHRDF 299 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 RPG R D SK ++ +G+ P ++ GL + + WY + Sbjct: 300 RPGDVRHSLADISKAQTLLGYQPSHRIDEGLREAMGWYTN 339 >gi|110635112|ref|YP_675320.1| NAD-dependent epimerase/dehydratase [Mesorhizobium sp. BNC1] gi|110286096|gb|ABG64155.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1] Length = 367 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/364 (26%), Positives = 161/364 (44%), Gaps = 49/364 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 ++++GG+GFIG L + D V+V+D L+ G NL+ LK + + DI Sbjct: 20 VVISGGSGFIGCNLAESFLRDGH-DVVVLDNLSRPGVSQNLSWLKAEFGERVHPVI-ADI 77 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E IR + + + A+ + AA++ V S+ N GT +LE R + Sbjct: 78 RDLEAIRPVIAKAR--AVFHLAAQTAVTTSLDDPLGDFAVNAEGTLNVLEAVR------A 129 Query: 120 QDKKDQFRFLQISTDEVYGSL--------------------DKGLFSEDMPYNPSSPYSA 159 +K F ST++VYG+L ++G+ SED + +PY Sbjct: 130 SGRKIPVIF--ASTNKVYGALGDLEMVELEDRYVPSSAEVRERGI-SEDRRLDFCTPYGC 186 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGD 216 +K +D VL + ++GIP + S YGP+ F + + + R ++G + +YG+ Sbjct: 187 SKGVADQYVLDYAKSFGIPTAVLRMSCIYGPHQFGTEDQGWVAHFLIRALQGQPISIYGN 246 Query: 217 GQNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+V D V A VL G +N+GG + + +L + + Sbjct: 247 GKQVRDVLHVSDAVAAYRRVLDNIDAVSGRTFNLGG-----GVRNAVSLRLVLQEI--RR 299 Query: 275 YSHTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + TE + D R G + D+++++SE+GW GL W P Sbjct: 300 ITGTEPVVGWGDWRAGDQYYFVADTTRLQSELGWSATIGWREGLKDLADWLRKARRLEPP 359 Query: 334 LYKE 337 ++E Sbjct: 360 HHQE 363 >gi|218900387|ref|YP_002448798.1| UDP-glucose 4-epimerase [Bacillus cereus G9842] gi|218545223|gb|ACK97617.1| UDP-glucose 4-epimerase [Bacillus cereus G9842] Length = 337 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MEILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALGAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLASGHVKALEKVLSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEE-----MC---ADSWRWQ 328 >gi|222098727|ref|YP_002532785.1| udp-glucose 4-epimerase [Bacillus cereus Q1] gi|221242786|gb|ACM15496.1| UDP-glucose 4-epimerase [Bacillus cereus Q1] Length = 338 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 64/362 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ +++V+D L+ + ++N +KE++ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNN-DYEIIVVDNLSNSSVESINRVKELTGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + +E +A+++FA V S+ + NII T +L C Sbjct: 59 LENYEALNKIFEENTIEAVIHFAGLKAVGESVAKPLMYYNNNIISTLVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV-------LAW 171 K++ + + S+ VYG + +E+ P + ++PY TK + ++ AW Sbjct: 110 VMQKRNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQMMRDVAFADAAW 169 Query: 172 GHTYGIPVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGS---HVFLY 214 + L N +G P P L+P +A+ ++ E S + + Sbjct: 170 S------IALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPT 223 Query: 215 GDGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 DG VRD+++V D HV+AL VL + + YN+G +++V + Sbjct: 224 KDGTGVRDYIHVVDLANGHVKALEKVLNTTGV-DAYNLGTGTGYSVLEMVEAFEKVSGKK 282 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 +P + E RPG D+SK K E+GW + +E +C ++W Sbjct: 283 VP--------YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MCA---DSWK 326 Query: 331 WR 332 W+ Sbjct: 327 WQ 328 >gi|53715205|ref|YP_101197.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] gi|52218070|dbj|BAD50663.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis YCH46] Length = 350 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/368 (24%), Positives = 162/368 (44%), Gaps = 68/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------------- 47 MR++VTG AGFIGS +CR L+ L D++ N+N+ E+ Sbjct: 1 MRVLVTGAAGFIGSFVCRELL-------LRGDEVVGLDNINTYYEVDLKYDRLATLTINR 53 Query: 48 ---------QSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE 95 QS+ F F+++++ DR+ ++ D +VN AA++ V SI Sbjct: 54 ESVDWYKFVQSDTYQNFRFIRMNLEDRQAMQMLFANEHFDRVVNLAAQAGVRYSIENPYA 113 Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS 154 ++ +N+ G +LE C K + S+ VYG K FSE D +P Sbjct: 114 YVESNVNGFLNVLE------GCRHNGVK---HLVYASSSSVYGLNGKVPFSEKDGIAHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+ATK S + + + + YGIP YGP+ P+ L M+ + ++ Sbjct: 165 SLYAATKKSDELMAHTYSYLYGIPTTGLRFFTVYGPWGRPDMSPFLFADAMLHNRSIKVF 224 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKN 256 +G +RD+ Y++D V + V+ + + YNIG + K Sbjct: 225 NNGDMLRDFTYIDDIVEGVLRVIDHIPMPDPRWCAEYPNPSSSTAPYKIYNIGNSYPVKL 284 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 D + I ++ YS ++ ++ + G + D++ ++ E+G+ P ++++ G Sbjct: 285 TDFIQAIEDMI------GYSAEKI--YLPMQSGDIYQTNADTTSLQEELGFKPNKSIKEG 336 Query: 317 LNKTVCWY 324 + +T+ WY Sbjct: 337 VKETIEWY 344 >gi|325108852|ref|YP_004269920.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324969120|gb|ADY59898.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 326 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 155/339 (45%), Gaps = 41/339 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIG L YL++ +V VID L+ G ++L +S + I D Sbjct: 3 RCLVTGGAGFIGGYLVEYLLSQGH-EVTVIDNLS-TGRSSNLDALSDHKNLTIRVGSITD 60 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 L E P D + + AA V I TNI T +LL RL Sbjct: 61 P----VLLAEVMPGHDQVYHLAAAVGVKLVADDPVRTIETNIYPTELLL---RLA----- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGH 173 + +F ST E YG +K + E D+ + P+S Y +KA ++L LA+ Sbjct: 109 --AQGGQKFFLASTSEAYGKNEKDSWVEEDDLHFGPTSKPRWAYGCSKAIDEFLALAYHQ 166 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+PV++ N GP +IP + + G + +Y DG+ VR + +V + VR Sbjct: 167 KYGLPVVIGRFFNVVGPRQVGNYGMVIPRFVEAALRGEKLTVYDDGEQVRCFAHVSEVVR 226 Query: 232 ALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI--EDRP 288 + +++K + R +NIG D I L + +I + E I +I +D Sbjct: 227 CITGLMEKDELPHRLFNIGS-------DTPISIRGLAEQVIEQVDPSLE-IEYIAYKDAY 278 Query: 289 GHD----RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 GHD RR D+S+++ +G+ P ++ L +T+ W Sbjct: 279 GHDFEDVRRRVPDTSRLEQTLGFKPTMPLKDILAETIEW 317 >gi|149201576|ref|ZP_01878550.1| NAD-dependent epimerase/dehydratase [Roseovarius sp. TM1035] gi|149144624|gb|EDM32653.1| NAD-dependent epimerase/dehydratase [Roseovarius sp. TM1035] Length = 337 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 156/354 (44%), Gaps = 56/354 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+ +TG AGFIG L L+++ I V +D +T Y +L + + Q F + Sbjct: 3 RVFITGTAGFIGYHLANLLLDE-GIVVHGLDGMTDYYDVSLKQRRHQMLMQKPGFVATEA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ + +A+ PD IV+ AA++ V S+ +I NI+GTF ++E Sbjct: 62 MLEDQTAVDAAIDACAPDIIVHLAAQAGVRYSLENPRAYIDANIVGTFNIMEAA------ 115 Query: 118 LSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 K+ R L ST VYG+ + DMPY +P + Y+ATK +++ + Sbjct: 116 ----KRHAVRHLLMASTSSVYGA------NTDMPYAETMKADSPMTIYAATKKATEAMGH 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A H + +P + YGP+ P+ + ++ G + +Y G+ RD+ YV D Sbjct: 166 AHAHLWNLPTTMFRFFTVYGPWGRPDMAYFKFVEAILAGRPIDIYNHGEMYRDFTYVGDL 225 Query: 230 VRALYLVLKKGRI----------GER---------YNIGGNNERKNIDIVFEIGFLLDAL 270 VR + L++ + G+ NIG + + + +D V A Sbjct: 226 VRGIRLLMDAAPVRPLTPEDIAPGDSLSPVAPYRIVNIGNSEKVRLLDFV--------AA 277 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I + + +E + G D+ +++ G+ PQ ++ G+ + V WY Sbjct: 278 IEDALERPAIRNMMEMQKGDVPATWADARLLETLTGYRPQTSVRDGIAQFVRWY 331 >gi|323463474|gb|ADX75627.1| NAD dependent epimerase/dehydratase family protein [Staphylococcus pseudintermedius ED99] Length = 314 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 43/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + N +V V+D L+ G ++ I + FL +D+ Sbjct: 1 MKILITGGAGFIGSHVAELFFNQHD-EVYVMDNLS-TGYRKNIPFIDDEH---FLHIDVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + ++ Q D I++ A+ V +I + NI LLE +R L Sbjct: 56 NHEAVAHIIQTHQYDIIIHLASVVSVVETIENPEVSNEVNISALVHLLELSRKHLPHLK- 114 Query: 121 DKKDQFRFLQISTDEVYG---SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F+ S+ VYG +L K + S P SPY+ K S + V + Y + Sbjct: 115 ------KFIFASSAAVYGNNPTLPKSITSH---IQPESPYAIQKYSGEQYVKLYHDLYHL 165 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-------LYGDGQNVRDWLYVEDHV 230 P N YGP P+ ++ M H F +GDG+ RD++YV+D V Sbjct: 166 PTTALRFFNVYGPKQDPQSQYSGVLSIM---KHCFDQDEPFTFFGDGEQTRDFVYVKDIV 222 Query: 231 RALYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 +A+ +V+++ G YN+ + + I L IP +F + R G Sbjct: 223 QAIQIVIQQHISHGAVYNVETSQPTSLLSIYEIFKHLYQKEIPT--------QFADPREG 274 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 D +Y+ + ++G+ Q ++E GLN+ YL N + PL Sbjct: 275 -DVKYSYADIEPLKQLGFSTQYSLEEGLNE----YL-NYEMYHPL 313 >gi|323699678|ref|ZP_08111590.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. ND132] gi|323459610|gb|EGB15475.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans ND132] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/353 (24%), Positives = 158/353 (44%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L D +V+ +D L Y NL + LK + QS LF + Sbjct: 1 MKILVTGAAGFIGFHLSKRLT-DAGHEVIGLDNLNDYYDVNLKKDRLKILEQSPLFRHVN 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +++ D + + + + +VN AA++ V SI +I +N++G +LE R Sbjct: 60 INLEDAQPMSELFQAERFTHVVNLAAQAGVRYSIENPRSYIDSNVVGFLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVL 169 +K + + S+ VYG + MP NP S Y+ATK S++ + Sbjct: 116 ---HNKVEHLVYA--SSSSVYG------MNTKMPLNPHEGVDHPMSLYAATKKSNEMMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ Y +P YGP+ P+ + L +IE + ++ G+ RD+ Y++D Sbjct: 165 SYSSLYNLPTTGLRFFTVYGPWGRPDMALFLFTKNIIEDKPINVFNYGKMRRDFTYIDDI 224 Query: 230 VRALYLVLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALI 271 V + V+++ + YNIG N V E+ ++ +I Sbjct: 225 VEGVVRVMQRTATPNPDWDGDHPDPCTSSVPYQIYNIGNNT-------VVELSRYIE-VI 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + ++ + G D S +++++G+ P +E G+ K + WY Sbjct: 277 EEVVGKKAIYNYMPMQAGDVPATEADVSDLQADVGFKPDTTIEEGIRKFIEWY 329 >gi|83320237|gb|ABC02802.1| putative UDP-glucose 4-epimerase [Actinomadura melliaura] Length = 329 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 147/336 (43%), Gaps = 26/336 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG+GF+GS L L + +V+V D + ++ + +L ++ DI D Sbjct: 4 RVVVTGGSGFVGSHLVERLAEQGR-EVVVYDAAAPPKD-----QVREPDLVRYVTGDIRD 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + + + + AA ++G D ++ + + T+ + L Q Sbjct: 58 ADRLAEVITP-EVEVVYHLAA-------VVGVDTYLGRPLDVIDVAFGGTK---AVLGQA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHTY 175 + + + +ST E+YG + + ED S YS++KA +++L A+ + Sbjct: 107 CRTGAKVVMVSTSEIYGKNEVVPWKEDADRVLGSTATDRWSYSSSKALAEHLTFAYMRQH 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ + N YGP P L+ + R + G +Y DG+ R + YV D V L Sbjct: 167 GLRATILRYFNVYGPRQRPAYLVSRTVHRALRGLPPVVYDDGRQTRCFTYVADAVEGTIL 226 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + + GE +N+G E ++ +G L L T+ + + +R RR Sbjct: 227 AGESPKADGECFNLGSTYEMPIGRVIEMVGELAGGLAQTVTVETDQV--LGNRYQDMRRR 284 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D+SK + +GW + GL + W N WW Sbjct: 285 VPDASKALATLGWRASTPLAKGLAAVIRWGRRNPWW 320 >gi|146312284|ref|YP_001177358.1| NAD-dependent epimerase/dehydratase [Enterobacter sp. 638] gi|145319160|gb|ABP61307.1| NAD-dependent epimerase/dehydratase [Enterobacter sp. 638] Length = 334 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE----ISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ D QV+ ID L ++ SLKE + S F+F + Sbjct: 1 MKFLVTGAAGFIGFHVSGRLL-DAGHQVVGIDNLNDYYDV-SLKEARLNLLTSENFTFHK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + + D +++ AA++ V S+ + N+IG +LE R Sbjct: 59 LDLADREGMAKLFADEKFDRVIHLAAQAGVRYSLDNPHAYADANLIGHLNVLEGCR---- 114 Query: 117 CLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 +Q + L S+ VYG K FS D + P S Y+ATK +++ + + H Sbjct: 115 ------HNQVQHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHL 168 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + MIEG+ + +Y G+ RD+ Y++D A+ Sbjct: 169 YNLPTTGLRFFTVYGPWGRPDMALFKFTKAMIEGNSIDVYNYGKMKRDFTYIDDIAEAII 228 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG ++ ++++ I L DAL ++ Sbjct: 229 RLQDVIPQADAEWTVETGSPATSSAPYRVYNIGNSSP---VELMDYITALEDALGKEAQK 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + I +PG + D+ + IG+ PQ ++ G+ V WY Sbjct: 286 NMMPI-----QPGDVLETSADTKALFDVIGFKPQTTVKDGVKNFVDWY 328 >gi|319949638|ref|ZP_08023675.1| NAD-dependent epimerase/dehydratase [Dietzia cinnamea P4] gi|319436694|gb|EFV91777.1| NAD-dependent epimerase/dehydratase [Dietzia cinnamea P4] Length = 323 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L ++V+ +D G ++L ++ F ++ D+ D Sbjct: 7 RAVVTGGAGFLGSHLCTEL-RRRGVEVVALDNF-LTGTPDNLAHLAADTGFQLMERDVTD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++FA+ + + + GT L L++D Sbjct: 65 YVHVPGPV-----DLVLHFASPASPIDYLKLPIHTLRVGSQGTHNAL--------GLARD 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHT 174 K RF+ ST EVYG D + + Y NP P Y K ++ L A+ T Sbjct: 112 KG--ARFVLASTSEVYG--DPLVHPQPETYWGNVNPVGPRGVYDEAKRYAEALTEAYRTT 167 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N +GP P + IP I + + G + + GDG R +V+D VR Sbjct: 168 HGVDTAIVRIFNTFGPRMRPHDGRAIPTFIRQALRGEELTVAGDGSQTRSVCFVDDLVRG 227 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + + G G NIG NE + + I ++ ++A+ + IR+I DRP D Sbjct: 228 ILALAESGHAGP-MNIGNPNELEVLRIARDV---IEAV-----GSSSRIRYI-DRPVDDP 277 Query: 293 RYAIDSSKIKSE-IGWFPQENMESGLNKTVCWY 324 + + + +E +GW P + GL +TV W+ Sbjct: 278 QVRRPDTALATEALGWAPAVSWAEGLARTVEWF 310 >gi|86138142|ref|ZP_01056717.1| hypothetical protein MED193_01405 [Roseobacter sp. MED193] gi|85825169|gb|EAQ45369.1| hypothetical protein MED193_01405 [Roseobacter sp. MED193] Length = 337 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/350 (24%), Positives = 158/350 (45%), Gaps = 44/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 R++VTG AGFIG L + L+++ +V D +T ++ +LK+ + L FS + Sbjct: 3 RVLVTGTAGFIGFHLAKLLLDE-GFRVHGFDGMTEYYDV-ALKQRRHAMLLQHPNFSATE 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D + + EF P I++ A ++ V S+ ++ TN++GTF ++E R Sbjct: 61 AMLEDTQAFDAMADEFAPQVIIHLAGQAGVRYSLENPRSYLETNVMGTFNVMEAAR---- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L S+ VYG D F+E D P + Y+A+K +++ + ++ H + Sbjct: 117 -----RLKVEHLLMASSSSVYGGNDVMPFTELDRTDAPLTIYAASKKANESMGHSYAHLW 171 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P + YGP+ P+ ++E + +Y G+ RD+ YV+D VR + L Sbjct: 172 DLPTTMFRFFTVYGPWGRPDLAFYKFGDAILEERPIDIYNHGEMYRDFTYVDDLVRGIRL 231 Query: 236 VL--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 ++ K I E NIG + + + +D + I L ++Y Sbjct: 232 LIDVVPQRPASKEEIEEGDSLSPVAPYRVVNIGNSEKVRLLDFIDAIEISLGKKAIRNYM 291 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + I D P D++ +K G+ PQ N G+++ V W+ D Sbjct: 292 EMQ----IGDVPAT----WADATLLKKLTGYQPQTNFREGIDRFVTWFRD 333 >gi|268323930|emb|CBH37518.1| putative Vi polysaccharide biosynthesis protein vipB/tviC [uncultured archaeon] Length = 312 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 148/330 (44%), Gaps = 35/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ I+TGGAGFIGS L L D +V+++D L+ GN +++ + ++ + Sbjct: 2 MKAIITGGAGFIGSNLAEVLSQDN--EVIIVDDLS-TGNEVNIRGLE----IELVKGSVT 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +R K D + + AA V RSI N+ GT +L R C + Sbjct: 55 DLDLLRKIFK--GADYVFHQAAIPSVPRSIKDPVSTNEANVTGTLKVLIAAR---DCGVK 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ YG + EDM NP SPY+ TK +Y + Y + Sbjct: 110 ------KVIFASSSSAYGDTPELPKREDMNPNPLSPYAVTKLIGEYYCNVFDEVYDLKTA 163 Query: 181 LSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P +IP I R+ EG +YGDG RD+ V+D V A L Sbjct: 164 ALRYFNVYGPKQDPYSDYAAVIPKFIKRIQEGKPPIIYGDGNQTRDFTSVDDVVSANILA 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-DRRYA 295 + G YN+ +R I+ E+ ++ A++ + I ++P D ++ Sbjct: 224 AESDAKG-VYNV-ATGKRITIN---ELASVIMAIMGRDLDP------IHEKPREGDVLHS 272 Query: 296 I-DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D +K K + G+ P + +E L +TV W+ Sbjct: 273 LGDITKAKKDFGYEPGDKLEENLKETVKWF 302 >gi|227504894|ref|ZP_03934943.1| UDP-glucose 4-epimerase [Corynebacterium striatum ATCC 6940] gi|227198487|gb|EEI78535.1| UDP-glucose 4-epimerase [Corynebacterium striatum ATCC 6940] Length = 328 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 42/325 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS LV + V +ID + GN ++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGSVCAAVLVEEGH-GVTIIDNFS-TGNREAVPAGAR-----LVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E + +V+FAA S V S+ ++ N++ + LL R + Sbjct: 54 D--VVEEVLAEGGFEGVVHFAARSLVGESVEIPADYWEHNVVTSLKLLNAMR------AH 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K+ + ST YG + +EDMP P++PY A+K S DY++ ++ YG+ Sbjct: 106 GVKN---LVFSSTAATYGEPKQVPITEDMPTQPTNPYGASKLSIDYIITSFAKAYGLGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGSIGENRAIETHLIPLVLQVALGHRDKIFMFGDDYPTADGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L LK G YN+ G+ + ++ V E + K H Sbjct: 223 RDLADAHVLALKTNTEGTHRIYNL-GSGDGYSVKEVIE-------MCRKVTGHEIPAEIA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S KIK+E+GW P Sbjct: 275 PRRAGDPATLVASSEKIKAELGWNP 299 >gi|116075546|ref|ZP_01472805.1| putative nucleotide sugar epimerase [Synechococcus sp. RS9916] gi|116066861|gb|EAU72616.1| putative nucleotide sugar epimerase [Synechococcus sp. RS9916] Length = 344 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 46/349 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-TY------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+ALC+ L+ QV+ ID L TY L ++ ++ S + F Sbjct: 9 ILVTGAAGFIGAALCQRLLQRGD-QVIGIDNLNTYYDPALKQARLEAIDAMAPSGAWRFE 67 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q+ + D + + + +P +VN AA++ V S+ +I +N++G +LE Sbjct: 68 QIALEDGDALLALFAAERPRVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILE------ 121 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 C ++ + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 122 GCRHHGVEN---LVYASSSSVYGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHL 178 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ L ++ G + ++ GQ RD+ Y++D V + Sbjct: 179 YGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGKPIRVFNHGQMQRDFTYIDDIVEGVL 238 Query: 235 LVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE------ 285 K VF IG + T L+RFIE Sbjct: 239 RCCDKPATANPDFDPLAPDPATAAAPHRVFNIG---------NSQPTPLLRFIEVMEQAL 289 Query: 286 ----------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A +++ ++ +G+ P +E+G+ + WY Sbjct: 290 GREAIKDFQPMQPGDVVATAANTAALEEWVGFKPSTPIETGVQRFADWY 338 >gi|148658189|ref|YP_001278394.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148570299|gb|ABQ92444.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 325 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 158/336 (47%), Gaps = 36/336 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ + +V +ID L+ G + +++ + FS+ +D Sbjct: 6 ILITGGAGFIGSHLADALI-ERGDRVAIIDDLS-TGAVANIRHLKGHPNFSY-TLDTIAN 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + L + + DA+V+ AA V + I TN+ GT E L W+ Sbjct: 63 EAVLAELID-ESDAVVHLAAAVGVQLIVQSPVRTIETNVNGT-----ELVLRWAA----- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSED--MPYNPSS----PYSATKASSDYLVLAWGHTYG 176 K L ST EVYG ++ F ED + PS+ Y+ +K ++L LA+ Sbjct: 112 KKGKTVLIASTSEVYGKSERAPFREDDDLVLGPSTINRWSYACSKLLDEFLALAYHKERD 171 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +PV+++ N GP ++P + + + +YGDGQ R + YV D VRAL Sbjct: 172 LPVIIARLFNTVGPRQTGRYGMVVPRFVRAALRNVPLRVYGDGQQTRCFCYVGDTVRALI 231 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDRP 288 +L +G+ +N+G E +++ + L + L+P Y H F ED Sbjct: 232 ALLDHPDAVGKVFNVGNPQEVSILELAQRVVRLAQSSSPIVLVP--YEHAYEAGF-EDM- 287 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D S++ + G+ P +++ + +TV Y Sbjct: 288 ---RRRVPDISRLTALTGFRPTLDLDD-IIRTVIEY 319 >gi|212640484|ref|YP_002317004.1| UDP-glucose 4-epimerase [Anoxybacillus flavithermus WK1] gi|212561964|gb|ACJ35019.1| UDP-glucose 4-epimerase [Anoxybacillus flavithermus WK1] Length = 338 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 150/342 (43%), Gaps = 45/342 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + + LV + VL NL++ F+ D+ DR Sbjct: 17 ILVVGGAGYIGSHVVKQLVETKPVVVL--------DNLSTGHRYLVDKKAVFVHGDLGDR 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ DA+++FAA S V S+ ++ N+ T LLE T + + Sbjct: 69 ATLVRIFEKYPIDAVMHFAANSLVGESVAEPMKYYKNNVAATLTLLE-TMMAYGVK---- 123 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 RF+ ST VYG + + +E P NP +PY +K ++++ + Y + ++ Sbjct: 124 ----RFIFSSTAAVYGIPNVDVITEQCPTNPINPYGRSKLMIEHMLADFASAYDLRYVVL 179 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPL + ++ + ++G DG +RD+++V Sbjct: 180 RYFNAAGAHESGEIGEDHQPETHLIPLILQHLLGMRDKISVFGTDYDTRDGTCIRDYIHV 239 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D H+ AL+ +L + YN+G + + + ++D + + I Sbjct: 240 TDLAEAHILALHALLSDEKKTATYNLGNG-------LGYSVKEVID-MCERVTGKKATIE 291 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + RPG R S I E+GW ++E + W+ Sbjct: 292 YTARRPGDPARLVASSENIARELGWKATRSLEDIITSAWRWH 333 >gi|42784426|ref|NP_981673.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] gi|42740358|gb|AAS44281.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] Length = 338 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGG G+IGS C L+N+ +++V+D L+ + ++N +KE++ F F + D Sbjct: 1 MAILVTGGVGYIGSHTCVELLNN-DYEIIVVDNLSNSSIESINRVKELTGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + +E +A+++FA V S+ + NII T +L C Sbjct: 59 LVNYEALNKIFEENTIEAVIHFAGLKAVGESVAKPLMYYHNNIISTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQMMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL V+ + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALAKVMNTTGV-DAYNLGTGTGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E RPG D+SK K E+GW + +E + W L+N Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEAKHGLEEMCADSWRWQLNN 331 >gi|268324965|emb|CBH38553.1| putative NAD dependent epimerase/dehydratase [uncultured archaeon] Length = 320 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 28/317 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TG +GF+GS L + L+ + V + + L+++K I + ++ DI D Sbjct: 6 RVLITGISGFVGSHLAEFF---LERGLEVYGTIRWRSKLDNIKHIQ--DKVRLIETDIKD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + E +PD + + AA+S V S E ++ NI+GT L E R + Sbjct: 61 AHSMQKTIDEVEPDYVFHLAAQSFVPTSWKAPSETVSANILGTVNLFEAIR--------N 112 Query: 122 KKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + E YG + D+ E P P SPY+ +K ++D + +YG+ + Sbjct: 113 SNSDPRIQVAGSSEEYGMVFPDEIPIKETNPLRPMSPYAVSKVATDLFGYQYHQSYGLKI 172 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N+ GP F + + +G V G+ RD+ V D V A + Sbjct: 173 VRTRAFNHTGPRRGEPFVTSNFAKQVAEIEKGLKEPVIHVGNLNAQRDFTDVRDIVNAYW 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + K + GE YNI R+ I VF+I ++D I + RP Sbjct: 233 LSVHKCKFGEVYNICSGVARE-IQSVFDILQGMVDVQIEVKQDPERM------RPSDVEI 285 Query: 294 YAIDSSKIKSEIGWFPQ 310 D SK + GW P+ Sbjct: 286 LMCDCSKFRERTGWVPK 302 >gi|307154119|ref|YP_003889503.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7822] gi|306984347|gb|ADN16228.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7822] Length = 360 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/325 (28%), Positives = 149/325 (45%), Gaps = 29/325 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG G GS L L+ QV I + T N + + I S++ LF Sbjct: 8 LITGITGQDGSYLSELLLEK-GYQVHGIIRRTSTFNTDRIDHIYVDPHNSEARLFLHYG- 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI-IGTFILLEETRLWWS 116 D+ D +R L++ QP I N A+SHV R + E+ ++ +GT LLE R + Sbjct: 66 DLTDGTTLRRILEQVQPIEIYNLGAQSHV-RVSFDSPEYTADSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q + E++G + + E P+ P SPY+ K + + L + +YG Sbjct: 123 --QHRTGIEVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYAHWQTLNYRESYG 180 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I AI R++ G LY G+ + RDW Y +D+V+ Sbjct: 181 MFACNGILFNHESPRRGET-FVTRKITRAIARILAGQQKKLYLGNLDSKRDWGYAKDYVK 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPG 289 A++L+L++ + + NE +I EI F L + Y + F E RP Sbjct: 240 AMWLMLQQQEPDD--YVVATNETHSIKEFLEIAFKFVNLDWQDY-----VEFDERYLRPA 292 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 DSSK ++++GW P E Sbjct: 293 EVDLLIGDSSKARTKLGWQPSVTFE 317 >gi|300312049|ref|YP_003776141.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] gi|124483494|emb|CAM32620.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae] gi|300074834|gb|ADJ64233.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 33/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFL 55 R ++TG AGFIGS L L+ L QV +D + G +L+E+ F F+ Sbjct: 17 RWLITGVAGFIGSNLLARLLT-LGQQVTGLDNFS-TGRQANLEEVRAEVGAAAWANFRFI 74 Query: 56 QVDICDRE-CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DICD C+R+ D +++ AA V RSI N+ G +L R Sbjct: 75 EGDICDAATCLRACDG---ADYVLHQAALGSVSRSIEDPVRTNLNNVNGFLNMLVAAR-- 129 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 RF+ ++ YG E++ P SPY+ TK ++ + Sbjct: 130 -------DAGVARFVYAASSSTYGDHPGLPKVEEVIGKPLSPYAVTKYVNELYAEVFARC 182 Query: 175 YGIPVLLSNCSNNYG----PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ + N +G P+ +IP +T MI + + GDGQ RD+ Y+++ V Sbjct: 183 YGMESIGLRYFNVFGRRQDPHGAYAAVIPQWVTAMIRNGELRINGDGQTSRDFCYIDNVV 242 Query: 231 RALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIED 286 +A L G + + YN+ N+R +++ ++ ++ L+ + + H + R ++ Sbjct: 243 QANLLAATAGEEAVNQVYNV-ALNDRTSLNDLYA---MMRELLVQRFPHLQEHRPSYVGF 298 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R G R D K + +G+ P + +GL + + WY+D+ Sbjct: 299 RAGDIRDSQADIGKARQRLGYAPTHRLRAGLEQAMSWYIDH 339 >gi|54025750|ref|YP_119992.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] gi|54017258|dbj|BAD58628.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] Length = 326 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++G +C ++ + +V+V+D LT GN + + ++ F++ D+ Sbjct: 1 MKLLVTGGAGYVGG-VCALVLLEQGHEVVVVDDLT-TGNADGVPAGAR-----FVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + L+ D +++FAA+S V S+ +++ N++ T LLE R Sbjct: 54 --EVAPALLRAETFDGVLHFAAQSLVGESVERPEKYWHGNVVKTLELLEAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG ++ +ED P P++PY ATK + D+ + ++ +G+ Sbjct: 104 -HTGTGRLVFSSTAAVYGEPEQVPITEDAPTRPTNPYGATKLAIDHAITSYAIAHGLAAT 162 Query: 181 LSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + + +YG DG +RD++++ Sbjct: 163 SLRYFNVAGAYGGLGENRVVETHLIPLVLQVALGHRESISVYGTDWPTPDGTAIRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L G YN+G GF + +I T L Sbjct: 223 RDLADAHLLALTSAEPGSHRIYNLGSGT-----------GFSVREVISACERVTGLPIAA 271 Query: 285 EDRP---GHDRRYAIDSSKIKSEIGWFPQEN 312 +D P G S + +E+GW PQ Sbjct: 272 QDAPRRAGDPAVLIASSERAVAELGWRPQHT 302 >gi|85705035|ref|ZP_01036135.1| udp-glucuronic acid epimerase protein [Roseovarius sp. 217] gi|85670357|gb|EAQ25218.1| udp-glucuronic acid epimerase protein [Roseovarius sp. 217] Length = 337 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 151/353 (42%), Gaps = 54/353 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+ +TG AGFIG L L+N+ + V +D +T Y +L + + Q F + Sbjct: 3 RVFITGTAGFIGYHLADLLLNE-GMTVHGLDGMTDYYDVSLKRRRHQMLLQKPGFVATEA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ + +A+ PD IV+ AA++ V S+ +I NI+GTF ++E + C Sbjct: 62 MLEDQAAVDAAIDACAPDIIVHLAAQAGVRYSLENPRAYIDANIVGTFTVMEAAKRHAVC 121 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 L ST +YG+ + DMPY + + Y+ATK +++ + A Sbjct: 122 ---------HLLMASTSSIYGA------NTDMPYAETMKADSQMTIYAATKKATESMGHA 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 H + +P + YGP+ P+ + ++ G + +Y G+ RD+ YV D V Sbjct: 167 HAHLWNLPTTMFRFFTVYGPWGRPDMAYFKFVEAILAGRPIDIYNHGEMYRDFTYVGDLV 226 Query: 231 RALYLVLKKGRI----------GER---------YNIGGNNERKNIDIVFEIGFLLDALI 271 R + L++ + G+ NIG + + + +D V I LD Sbjct: 227 RGIRLLMDAAPVRPDAPEDIAAGDSLSPVAPYRIVNIGNSQKVRLLDFVAAIEDALD--- 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +E + G D+ +K G+ P + G+ + V WY Sbjct: 284 -----RPAIRNMMEMQKGDVPATWADAQLLKRLTGYQPNTEIHDGIAQFVTWY 331 >gi|75909435|ref|YP_323731.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703160|gb|ABA22836.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] Length = 316 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEIS---QSNLFSFLQV 57 ++IVTG AGFIGS L L+ + +V+ ID++ Y L K I+ S F+F++ Sbjct: 3 KIIVTGAAGFIGSHLVETLLKQGE-EVIGIDEVNDYYDPLLKRKNIAYLQSSPNFTFIEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWS 116 DI + S L++ + + AA++ V S G + NI T +LLE + Sbjct: 62 DIQFLDW-PSLLQDV--TVVYHQAAQAGVRASWGKGFRAYTERNINATQVLLEAAK---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D + RF+ ST VYG + E +P P SPY TK +++ L + +G Sbjct: 115 ----DAQQLTRFVFASTSSVYGDAETLPTHEGIPPQPVSPYGITKLAAERLCGLYHKNFG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP P+ +++ + +YGDGQ RD+ +V D V A Sbjct: 171 VPFVALRYFTVYGPRQRPDMAFHKFFKSVLQDEAIPVYGDGQQTRDFTFVSDAVAANLAA 230 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +GE +NIGG + +++ + ++ I +++ IE G R A Sbjct: 231 ASVPTAVGEIFNIGGGSRVVLAEVLDTMEQIVGQPIKRNH--------IEKAMGDARHTA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK + +G+ PQ ++ GL+ W Sbjct: 283 ADVSKARKILGYEPQVSLREGLSLEWQW 310 >gi|320335331|ref|YP_004172042.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] gi|319756620|gb|ADV68377.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] Length = 329 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 47/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTGGAG+IGS R L V V+D L+ +G+ +L + + + QVD+ Sbjct: 1 MNLLVTGGAGYIGSHTVRAL-QRAGYTVTVLDNLS-SGHAEALPDGA-----TLAQVDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ L +PDAIV+FAA V S+ + N+ G+ LL+ ++ Sbjct: 54 DYSAVKDTLARVRPDAIVHFAALIEVGESMKEPARYYRNNVTGSLNLLQAN-------AE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 K F ST VYG ED P P+S Y TK +++++ A+ +GI Sbjct: 107 TVKAPIVF--SSTAAVYGDAQSTPIPEDAPKAPTSVYGETKLMTEHMLNAFDRAHGIRHI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK--LIPLA-ITRMIEGSHVFLYG------DGQNVRDW 223 V + G H P K LI LA +T + + + ++G DG +RD+ Sbjct: 165 KLRYFNVCGAQPGGQIGEDH-PNKTHLIELALLTALGQREKMMIFGEDYPTPDGTCIRDY 223 Query: 224 LYVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D A L +K G YN+G + F + +LDA+ T L Sbjct: 224 IHVADLADAHVLAVKALLDGAPSNAYNVGLGHG-------FSVRQVLDAV--DDVLGTPL 274 Query: 281 IRFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 R I R G DS +I+ E+ W PQ Sbjct: 275 KREIAPRRAGDPPSLVADSHRIQQELHWTPQ 305 >gi|242310051|ref|ZP_04809206.1| GDP-mannose 4,6-dehydratase [Helicobacter pullorum MIT 98-5489] gi|239523348|gb|EEQ63214.1| GDP-mannose 4,6-dehydratase [Helicobacter pullorum MIT 98-5489] Length = 342 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 30/324 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + +V+ + + N+ L + I++ + S D+ D Sbjct: 5 LITGFTGQVGSQMADFLLENTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISVFYADLND 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ + +PD I + AA+S S E + TNIIGT +LE R+ +D Sbjct: 65 YSSIQKLFETKRPDVIFHLAAQSFPKTSFEIPIETLQTNIIGTANILENIRILKQ---KD 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ P++ +SPYS +K +DYL +G YGI Sbjct: 122 GYDPVVHV-CSSSEVYGRAKVGVKLNEETPFHGASPYSISKIGTDYLGRFYGEAYGIKTY 180 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDHVRALYL 235 ++ + GP F E + I + G V G+ +VR + D +RA YL Sbjct: 181 VTRMGTHSGPRRSDVFFESTVAKQIALIEAGLQEPVIKVGNLSSVRTFQDCRDAIRAYYL 240 Query: 236 V---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---- 286 + +KG + GE +NI G F++ +++ L+ +S + I+ ED Sbjct: 241 LSLESEKGNVPCGEAFNIAGEE-------AFKLPEVIEILL--GFSTRKDIKVQEDAERL 291 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 292 RPIDADYQMFDNTKIKSFIDWKPE 315 >gi|288934442|ref|YP_003438501.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22] gi|288889171|gb|ADC57489.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22] Length = 334 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ +VTG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLVTGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q D ++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFAAEQFDRAIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y IP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYSIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ + +D + + L Sbjct: 225 EAVVRVQDVIPQANADWTVESGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGMEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ + +PG + D+ + +G+ PQ +++ G+ V WY D Sbjct: 285 KN--------MMPIQPGDVLDTSADTQPLYDLVGFKPQTSVKEGVKNFVEWYKD 330 >gi|116750779|ref|YP_847466.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116699843|gb|ABK19031.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 342 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 30/338 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFLQV 57 +VTG AGFIGS L L+ L +V+ +D ++G+ +L E+ S F+F + Sbjct: 19 LVTGVAGFIGSNLLERLLQ-LDQRVVGLDNF-FSGSPRNLAEVKSSVGPGKWERFTFAEG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + A + D +++ A V SI N+ GT +L R Sbjct: 77 DVRDPKACLEACRGV--DYVLHQAGFCSVPASIDEPALCNEVNVCGTVNMLTAAR----- 129 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ S+ VYG + E++ P SPYS TK + + A+ T G+ Sbjct: 130 ----DLGVGRFVYASSSSVYGDSPELPEKEEVIGRPLSPYSVTKRTGELYAAAFAATCGL 185 Query: 178 PVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP +IP I+ MI G F+ G G+ RD+ YVE+ V+A Sbjct: 186 EAVGLRYFNVFGPRQAAGGAYGAVIPAWISAMIRGEACFINGTGETSRDFCYVENAVQAN 245 Query: 234 YLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPG 289 L G + + YN+ E +++ +F++ LLD L P + + D RPG Sbjct: 246 LLAATTGNAQAVNQVYNV-AFGESTSLNELFQM--LLDRLSPHNARLEDYRPVHRDFRPG 302 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D + + +G+ P ++ +GL+ + WY N Sbjct: 303 DIMHSVADIGRARELLGYEPTHDVAAGLDAALEWYTRN 340 >gi|269926815|ref|YP_003323438.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] gi|269790475|gb|ACZ42616.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] Length = 326 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 30/273 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG +GF+G YLV +LK Q + L+ +G + + ++ D+ D Sbjct: 5 QVLVTGASGFVGP----YLVRELKTQGWHVWALSRSG--------APVEGATPVRADLLD 52 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I+ +++ +PD I + AA+S V S I N +G LL +S L D Sbjct: 53 RGAIQHIIQDIRPDVIFHLAAQSSVFSSFEHPIYTIENNTLGAANLL------YSALDID 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K R + I + E YG + E P P SPY+ +KA+ L L+ + +PV Sbjct: 107 PKP--RIIAIGSAEEYGKVKPNELPIDEKQPLAPISPYAVSKAAQTLLALSLHESQELPV 164 Query: 180 LLSNCSNNYGPYHFPEKLIPL---AITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALY 234 + N+ GP P +IP I R+ G V G+ ++ RD+ V D V+A Sbjct: 165 TVLRPFNHTGPGQKPRLVIPSIAEQIARIEAGLSEPVIRVGNTESKRDFTDVRDIVKAYV 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 L + + R GE YNIG +++ I + + FL+ Sbjct: 225 LAVDRSRSGEIYNIGTG---RSVSIQWILEFLV 254 >gi|261346759|ref|ZP_05974403.1| UDP-glucuronate 5'-epimerase [Providencia rustigianii DSM 4541] gi|282565159|gb|EFB70694.1| UDP-glucuronate 5'-epimerase [Providencia rustigianii DSM 4541] Length = 333 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 39/345 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG LC+ L+ +V+ ID + Y L L + Q F F+ Sbjct: 1 MKYLVTGSAGFIGFRLCQRLLESGH-EVIGIDNMNAYYDQGLKQSRLHILEQYPQFRFIP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DRE + + D +++ AA++ V S+ + +N+ G +LE R Sbjct: 60 LDITDREKVLVLCTQENFDRVIHLAAQAGVRYSLQNPFAYADSNLNGHLAILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 Q K + S+ VYG DK F+ DMP + P S Y+ATK +++ + ++ H Y Sbjct: 116 ---QAKVKHLVY--ASSSSVYGVTDKMPFTTDMPTDHPISLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y +G RD+ +++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEPIDVYNNGDLSRDFTFIDDIVEGVIR 230 Query: 236 ---VLKKGRIGER-------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ + R YNIG K I+ + + + K+ Sbjct: 231 ISDIIPQADPQNRSDSPAESSAPYRIYNIGNGQPVKLIEFI--------SALEKALGKEA 282 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ + G D+ + G+ P +E G+ V WY Sbjct: 283 IKNFLPMQAGDVYTTWADTEDLFKATGYRPHVTIEQGVQAFVDWY 327 >gi|255536631|ref|YP_003097002.1| UDP-N-acetylglucosamine 4-epimerase [Flavobacteriaceae bacterium 3519-10] gi|255342827|gb|ACU08940.1| UDP-N-acetylglucosamine 4-epimerase [Flavobacteriaceae bacterium 3519-10] Length = 342 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 154/358 (43%), Gaps = 49/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNL-NSLKEISQSNLFSFL 55 M +VTGG+GFIGS L +L+ + V+ +D Y + N+L F+F Sbjct: 1 MNYLVTGGSGFIGSHLVEHLLKNGH-SVINVDNFDDFYDYRIKIKNTLSSTGLETAFAFQ 59 Query: 56 Q---------------------VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD 94 DI DR ++ + + DA+++ AA + V SI Sbjct: 60 DKGRDIQKVIFETSSRDYQLYYQDIRDRSGLQKIFAKHKIDAVIHLAALAGVRPSIERPA 119 Query: 95 EFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNP 153 ++ NI GT LW C + + S+ VYG+ +K FSE D P Sbjct: 120 DYEEVNIKGTM------NLWEVCREHRVN---KIVCASSSSVYGNNEKIPFSETDSVDEP 170 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 SPY+ATK + + L + H YGI ++ +GP P+ I + + + + Sbjct: 171 ISPYAATKRAGEILGHVYHHLYGIDMVHLRFFTVFGPRQRPDLAIHKFTSLIRSKNEIPF 230 Query: 214 YGDGQNVRDWLYVEDHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 YGDG RD+ Y++D + + + + + + E N+G N V + +L A Sbjct: 231 YGDGSTARDYTYIDDIIDGILKTITYLHRNNGVYEILNLGENQ-------VITLDEMLSA 283 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 I ++ L + + +PG + D SK ++ IG+ P N G+ K V W+L N Sbjct: 284 -IEENLEIMSLKKRLPLQPGDVQITNADISKARALIGYNPTTNFHIGIKKFVEWFLRN 340 >gi|89052568|ref|YP_508019.1| NAD-dependent epimerase/dehydratase [Jannaschia sp. CCS1] gi|88862117|gb|ABD52994.1| NAD-dependent epimerase/dehydratase [Jannaschia sp. CCS1] Length = 332 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 39/343 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQVD 58 +VTG AGFIG LC L+ D +V+ +D +T ++ SLKE ++ + F+ ++ Sbjct: 5 LVTGSAGFIGYHLCARLLAD-GWRVIGLDAMTDYYDV-SLKEARLAMLTDHDAFTGVEAR 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E +PDAI++ AA++ V SI + ++ N+IGTF LLE R + Sbjct: 63 IEAPGVLHDLFDEHRPDAIIHLAAQAGVRYSIENPESYVEANLIGTFRLLEAMRAFPPRH 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYGI 177 S L ST YG+ + ++E M + S Y+ATK S++ + ++ H Y + Sbjct: 123 S---------LLASTSSAYGANTEMPYAETMQADHQMSFYAATKKSNEVMAHSYAHLYDL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P + YGP+ P+ + ++ G + +Y G RD+ YV D V + ++ Sbjct: 174 PTTMFRFFTVYGPWGRPDMALFKFTKAILNGDPIDVYNHGDMKRDFTYVTDLVDGIIRLI 233 Query: 238 KKGRIGER--------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 + E NIG +N + +D + I + T Sbjct: 234 EAVPGTEPVESDSLSPVAPHRIVNIGNSNSVQLMDYI--------EAIETATGRTAEKNM 285 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + G D+S ++ + P+ +M G+ V WY D Sbjct: 286 MPMQAGDVPATWADASLLQHLTQYTPRTDMAEGVANFVAWYRD 328 >gi|29375247|ref|NP_814400.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis V583] gi|227554760|ref|ZP_03984807.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis HH22] gi|29342706|gb|AAO80471.1| NAD-dependent epimerase/dehydratase family protein [Enterococcus faecalis V583] gi|227176059|gb|EEI57031.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis HH22] gi|315166898|gb|EFU10915.1| NAD-binding domain 4 [Enterococcus faecalis TX1341] gi|315575382|gb|EFU87573.1| NAD-binding domain 4 [Enterococcus faecalis TX0309B] gi|315581440|gb|EFU93631.1| NAD-binding domain 4 [Enterococcus faecalis TX0309A] Length = 319 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 32/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGGAGFIGS L + + QV VID L+ G +++L++ Q F++ + D Sbjct: 3 KLLITGGAGFIGSNLANFYSQ--QYQVFVIDDLS-MGRVSNLQQTEQ---LVFIKGSVTD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + L + + I + AA + V S+ E N + +LE + + L Sbjct: 57 QQLLDEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLK-- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ S+ VYG+ E P SPY+ K +++ VL H +G+P Sbjct: 115 -----RFVFASSAAVYGAEPTLPKRETSVICPLSPYAIDKFAAERYVLNEYHLHGVPTSA 169 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDHVRA 232 N YG P ++ + + R I+ S ++GDGQ RD++Y+ED + A Sbjct: 170 VRFFNVYGLNQNPASPYSGVLSILMDRYIQLEQGQVSQFQIFGDGQQTRDFIYIEDVLTA 229 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L LV K +G YN+G ++ E+ L+ +P SY ++R G D Sbjct: 230 LNLVATKSEALGHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQ--------KERDG-D 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 +Y++ S +G+ P +++ GL K Sbjct: 281 IKYSLSDSSALKGLGFSPVYSIQEGLQK 308 >gi|258406617|ref|YP_003199359.1| NAD-dependent epimerase/dehydratase [Desulfohalobium retbaense DSM 5692] gi|257798844|gb|ACV69781.1| NAD-dependent epimerase/dehydratase [Desulfohalobium retbaense DSM 5692] Length = 337 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 47/351 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 MR++VTG AGFIGS L R L++D + V+ +D L LN L+E F Sbjct: 1 MRVLVTGAAGFIGSHLSRRLLDDGHV-VVGLDNLNDYYSPELKEARLNLLREYEN---FD 56 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+ +D+ + + E+ +VN AA++ V S+ +I +NI G LLE Sbjct: 57 FVMLDLIEDAELDRVFAEYGFTHVVNLAAQAGVRYSLENPKAYIDSNINGFAHLLE---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 C F S+ VYG FS D +P S Y+A+K S++ + + Sbjct: 113 ---CCRHHSIHHLVF--ASSSSVYGLNTAMPFSVHDNVDHPISLYAASKKSNELMAHTYS 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + YG+P YGP+ P+ + L ++ G + ++ G+ RD+ Y++D V Sbjct: 168 YLYGLPTTGLRFFTVYGPWGRPDMALFLFTEAILSGKPIKVFNHGKMQRDFTYIDDIVEG 227 Query: 233 LYLVLKK-GRI-----GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + VL + R G R YNIG NN + + + L K Sbjct: 228 VVRVLHRPARANPEWDGARPDPGSSPAPYKLYNIGNNNSVELERFIEVVESCLGKKAKKD 287 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 Y + +PG D + +++G+ P +E G+ V WY+ Sbjct: 288 Y--------LPLQPGDVPATYADVDDLMADVGFRPNTPIEEGVANFVSWYM 330 >gi|161830800|ref|YP_001596875.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] gi|161762667|gb|ABX78309.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] Length = 330 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 + +V GGAG IGS L+ + +V++ D NL ++ ++ + DI Sbjct: 7 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLTQALRDPRTKIYD-IGGDI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWW 115 + + +ALK D + +FAA +L E+ TNI GTF +LE Sbjct: 66 NQTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H Y Sbjct: 113 TCVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHHRY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVR 231 G+P + N YGP I +M++ G + LYGDG D++YVED Sbjct: 170 GLPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAA 229 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIED 286 A +K + E YN+G +++ EI + +P+ + F+++ Sbjct: 230 ANICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKN 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R G ++ A +IG+ + + GL + + W Sbjct: 284 RIGCPKKAA-------EQIGFKAEVGLTEGLQRLIEW 313 >gi|327404160|ref|YP_004344998.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] gi|327319668|gb|AEA44160.1| dTDP-glucose 4,6-dehydratase [Fluviicola taffensis DSM 16823] Length = 332 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 27/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ + V+V+D L G +++ +S + F++ DIC+ Sbjct: 16 ILVTGGAGFIGSNLTEALLK-IGASVIVLDNLE-TGLQSNVDRLSHYENYRFVKGDICNP 73 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + R LKE DAI N AA V RSI N G +L E + + Sbjct: 74 DDYRDLLKEV--DAISNQAALGSVPRSIEFPLNTHRVNGTGFLTILHEAK---------Q 122 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + RF+ S+ VYG E SPY+ATK ++ + +G+ + Sbjct: 123 ANVKRFVYASSSSVYGDSIASPKHEGQEGKVLSPYAATKQLNEEYGQVYHQLHGMETIGL 182 Query: 183 NCSNNYGPYHFPEKL----IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP+ P + IP + +M+EG + + GDG+ RD+ YV++ V A L L Sbjct: 183 RYFNVFGPFQNPNGVYAAAIPKFLDKMLEGGEIVVNGDGEQSRDFTYVKNAVHANLLALI 242 Query: 239 KGRI---GERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + G+ YN+ D++ + +L PK+ I + R G + Sbjct: 243 SDNVEAFGKVYNVACGRSLTLNDVINSLQAELILLGTTPKN-----TITYGPPRKGDIKD 297 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++++ + + P E G+N+ + L N Sbjct: 298 SLASITRMEQYLNYKPVYTFEEGINEYLRHVLQCN 332 >gi|30265288|ref|NP_847665.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Ames] gi|47530823|ref|YP_022172.1| UDP-glucose 4-epimerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188100|ref|YP_031353.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Sterne] gi|65317233|ref|ZP_00390192.1| COG1087: UDP-glucose 4-epimerase [Bacillus anthracis str. A2012] gi|165870079|ref|ZP_02214736.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0488] gi|167636531|ref|ZP_02394827.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0442] gi|167641811|ref|ZP_02400052.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0193] gi|170689420|ref|ZP_02880612.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0465] gi|170708970|ref|ZP_02899402.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0389] gi|177654065|ref|ZP_02936075.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0174] gi|190567758|ref|ZP_03020670.1| UDP-glucose 4-epimerase [Bacillus anthracis Tsiankovskii-I] gi|227818025|ref|YP_002818034.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CDC 684] gi|229604065|ref|YP_002869479.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0248] gi|254686314|ref|ZP_05150173.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CNEVA-9066] gi|254724310|ref|ZP_05186094.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A1055] gi|254735191|ref|ZP_05192900.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Western North America USA6153] gi|254744397|ref|ZP_05202077.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Kruger B] gi|254755699|ref|ZP_05207732.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Vollum] gi|254759570|ref|ZP_05211595.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Australia 94] gi|134104008|pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase gi|134104009|pdb|2C20|B Chain B, Crystal Structure Of Udp-Glucose 4-Epimerase gi|134104010|pdb|2C20|C Chain C, Crystal Structure Of Udp-Glucose 4-Epimerase gi|134104011|pdb|2C20|D Chain D, Crystal Structure Of Udp-Glucose 4-Epimerase gi|134104012|pdb|2C20|E Chain E, Crystal Structure Of Udp-Glucose 4-Epimerase gi|134104013|pdb|2C20|F Chain F, Crystal Structure Of Udp-Glucose 4-Epimerase gi|30259966|gb|AAP29151.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Ames] gi|47505971|gb|AAT34647.1| UDP-glucose 4-epimerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182027|gb|AAT57403.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Sterne] gi|164714402|gb|EDR19922.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0488] gi|167510223|gb|EDR85628.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0193] gi|167528063|gb|EDR90863.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0442] gi|170126135|gb|EDS95030.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0389] gi|170666647|gb|EDT17418.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0465] gi|172080948|gb|EDT66027.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0174] gi|190561174|gb|EDV15147.1| UDP-glucose 4-epimerase [Bacillus anthracis Tsiankovskii-I] gi|227005806|gb|ACP15549.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CDC 684] gi|229268473|gb|ACQ50110.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0248] Length = 330 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW P+ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPR 306 >gi|302873798|ref|YP_003842431.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307689961|ref|ZP_07632407.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302576655|gb|ADL50667.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 317 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFI S + LV +L V++ D NL+S K + + F + DI Sbjct: 1 MKILITGGAGFIASHIADRLV-ELDYDVVIFD------NLSSGKVENINPKCKFYKGDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E ++ +P+ +++ AA+ V S+ NIIGT +LE C + Sbjct: 54 NYEAMKLVFDIERPEVVIHHAAQIDVQTSLKNPAFDAQINIIGTINVLE-------CCRE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ E+ P P S Y +K + + + A+ Y I Sbjct: 107 TKVR--KIIYPSSAAVYGNPKYLPVDENHPVEPISFYGISKHTPCHYIKAYSELYNIKYT 164 Query: 181 LSNCSNNYGPY---HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP H ++ + R++ ++YGDG+ RD++YV+D A L L Sbjct: 165 IFRYANVYGPRQDNHGEGGVVSIFANRLLRKETCYIYGDGKQTRDFIYVKDVANANVLAL 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTEL-IRFIEDRPGHDRRY 294 +G + + IDI ++ L + K S + + + E R G Sbjct: 225 DRG------------DNEIIDISSNKPVTINQLHKVMKEISKCSVAVEYKEARNGDILHS 272 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K +GW + +++SGL +T+ +Y Sbjct: 273 YLSNEKASGCLGWKDKHDIKSGLKETLNYY 302 >gi|229051119|ref|ZP_04194665.1| UDP-glucose 4-epimerase [Bacillus cereus AH676] gi|228722248|gb|EEL73647.1| UDP-glucose 4-epimerase [Bacillus cereus AH676] Length = 347 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 160/351 (45%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 10 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 67 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 68 VLNREALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 119 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 178 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 179 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 238 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 239 RDYIHVVDLANGHVKALEKVLSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 293 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E RPG D+SK K E+GW +E + W +N Sbjct: 294 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEEMCADSWKWQSNN 340 >gi|229112863|ref|ZP_04242395.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-15] gi|229147993|ref|ZP_04276333.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST24] gi|228635488|gb|EEK91978.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST24] gi|228670697|gb|EEL26009.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-15] Length = 338 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEE-----MC---ADSWKWQ 328 >gi|226310143|ref|YP_002770037.1| hypothetical protein BBR47_05560 [Brevibacillus brevis NBRC 100599] gi|226093091|dbj|BAH41533.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 734 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 30/327 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGG GFIGS + + +V ++D L+ +GN ++ ++ ++D+ Sbjct: 1 MKVLITGGYGFIGSFVAERFYKE-GYKVFILDNLS-SGNQRNVTFPHKA-----YELDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++C K + D +++ AA+ V S+ TNI+G +L+ + + Sbjct: 54 DKKC-DEVFKSNKFDVVIHLAAQVSVAASMEDPLLDTNTNILGLVNMLKLSSKYGVS--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +F+ S+ VYG + ED +P S Y K + W YG+ + Sbjct: 110 ------KFIFASSAAVYGMNECTPLLEDSGCDPVSVYGINKHIGEMYCRKWTEMYGLQTV 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP +I +T++ G + L+GDG RD++YVED A++ + Sbjct: 164 AFRLANVYGPRQSAGGEGGVISTFLTQINHGKEIVLHGDGSQTRDFIYVEDVADAIFRSV 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G N+ N E I L+D L + + I E RPG + +D Sbjct: 224 TTDDTG-VMNLSTNQES-------SINELIDIL--GANQPLQGISRREKRPGDVDKSVLD 273 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ K + W P ++ GL KT WY Sbjct: 274 NTWAKRRLDWIPMYSLAEGLEKTAQWY 300 >gi|91216652|ref|ZP_01253617.1| NAD-dependent epimerase/dehydratase family protein [Psychroflexus torquis ATCC 700755] gi|91185121|gb|EAS71499.1| NAD-dependent epimerase/dehydratase family protein [Psychroflexus torquis ATCC 700755] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 43/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEI---------- 46 M+++VTG AGFIG LC L+ L V+ +D + Y NL LKE+ Sbjct: 1 MKILVTGAAGFIGYHLCEQLLK-LGHDVVGLDNINDYYDVNLKYARLKELGISESEIQYN 59 Query: 47 ------SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 S + F+++++ D+E + +E D + N AA++ V SI +++ +N Sbjct: 60 KGINSNSHGDKLKFIKINLEDQENLPIFFEENSFDVVCNLAAQAGVRYSIEKPMKYVESN 119 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSA 159 I+G LLE C+ K + + S+ VYG +K F + D NP S Y+A Sbjct: 120 IMGFANLLE-------CVRNTKVKKLVYA--SSSSVYGLNEKTPFATNDNVDNPISMYAA 170 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 TK S++ + + H +GI + YGP+ P+ + L ++ + ++ +G Sbjct: 171 TKKSNELMAHTYSHLFGIKTIGLRFFTVYGPWGRPDMAMFLFTDAILNNKPIKVFNEGNL 230 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 RD+ Y++D V + ++K + YNIG + K D + EI + + Sbjct: 231 SRDFTYIDDIVEGVINTIEKKNPNKSLYNLYNIGHGSPVKLNDYIKEIEVATGKVAERI- 289 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D+S + + + P ++ G+ + V WY D Sbjct: 290 -------MMPMQPGDVEQTWADTSALFKDYNYKPTTKIDKGIEEFVRWYKD 333 >gi|329954492|ref|ZP_08295583.1| NAD dependent epimerase/dehydratase family protein [Bacteroides clarus YIT 12056] gi|328527460|gb|EGF54457.1| NAD dependent epimerase/dehydratase family protein [Bacteroides clarus YIT 12056] Length = 350 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/361 (24%), Positives = 158/361 (43%), Gaps = 54/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIGS + ++L +ND L +L G N+ K Sbjct: 1 MKILVTGAAGFIGSYVSKHLLAYGNEVIGLDNINDYYDINLKYGRLAELGIEKENIGWYK 60 Query: 45 EISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 S + F F+++++ D + ++ D + N AA++ V SI +I +N+ Sbjct: 61 FTSSTTFSNFRFIRMNLEDTQAMQMLFANEGFDCVCNLAAQAGVRYSIQNPYAYIESNVD 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATK 161 G +LE C K F+ S+ VYG K FSED +P S Y+A+K Sbjct: 121 GFLNVLE------GCRHNKVK---HFVYASSSSVYGLNGKVPFSEDDSIAHPVSLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ H Y IP YGP+ P+ L ++ + ++ +G +R Sbjct: 172 KSNELMAHAYSHLYNIPSTGLRFFTVYGPWGRPDMSPFLFADAILNHRPIKVFNNGDMLR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ Y++D V + V+ + YNIG + K +D + I Sbjct: 232 DFTYIDDIVEGVLKVITHIPTADATWNPEFPSPASSSAPYKIYNIGNSQPVKLMDFIQAI 291 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K Y + +PG + D+S++++E+G+ P +++ G+ +T+ W Sbjct: 292 ENAIGEEADKIY--------LPMQPGDVYQTYADTSRLENELGFKPHKDLNEGVKETISW 343 Query: 324 Y 324 Y Sbjct: 344 Y 344 >gi|13123740|gb|AAK12961.1|AF343914_14 RlmB [Campylobacter jejuni] Length = 109 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/80 (55%), Positives = 59/80 (73%) Query: 246 YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEI 305 +NIG N E +NIDI +I LD ++PK+ S+ E I F++DR GHDRRYAIDS+K++ I Sbjct: 25 FNIGTNEEWQNIDIANKICSYLDNVLPKNTSYKEQITFVKDRAGHDRRYAIDSTKLQRVI 84 Query: 306 GWFPQENMESGLNKTVCWYL 325 GW QEN SGL+KT+ WY+ Sbjct: 85 GWKAQENFNSGLDKTIQWYI 104 >gi|89076363|ref|ZP_01162696.1| putative nucleotide sugar epimerase [Photobacterium sp. SKA34] gi|89047934|gb|EAR53525.1| putative nucleotide sugar epimerase [Photobacterium sp. SKA34] Length = 334 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/352 (25%), Positives = 156/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+ ++TG +GFIGSA+ L QV+ ID NLN ++S Q+ L Sbjct: 1 MKYLITGVSGFIGSAITERLCAQGH-QVIGID------NLNDYYDVSLKQARLARIVHPS 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F+++D+ DRE I + + Q + +++ AA++ V SI + +N++G +LE Sbjct: 54 FTFIELDLADREGIANLFSDQQFNRVIHLAAQAGVRYSIDNPLAYADSNLVGHLTILEGC 113 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLA 170 R K Q + S+ VYG K F + D +P S Y+ATK S++ + Sbjct: 114 R--------HNKVQ-HLVYASSSSVYGLNHKTPFNTADSVDHPISLYAATKKSNELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+P YGP+ P+ + ++EG + +Y G RD+ Y++D V Sbjct: 165 YSHLYGVPTTGLRFFTVYGPWGRPDMALFKFTNAIMEGKEIDVYNHGDMRRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + ++ G YNIG + K +D + + L Sbjct: 225 EGVMRIQDVIPQPNSDWTVEAGSPATSSAPYRVYNIGHGSPVKLMDYIEALEEALGIEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ F++ +PG D+ + G+ P+ ++ G+ V WY Sbjct: 285 KN--------FMDMQPGDVYMTYADTEDLFKATGYKPEVKVKEGVKAFVDWY 328 >gi|297624790|ref|YP_003706224.1| UDP-glucose 4-epimerase [Truepera radiovictrix DSM 17093] gi|297165970|gb|ADI15681.1| UDP-glucose 4-epimerase [Truepera radiovictrix DSM 17093] Length = 326 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 56/334 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS LVN +V+V+D L G+ +++ E + +F+ DI Sbjct: 1 MNVLVTGGAGYIGSVTVEALVNRGH-RVVVLDNLV-TGHRDAVHEAA-----AFVHGDIQ 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + A++E +A+++FAA S V S+ ++ N G+ LLE + + Sbjct: 54 DPEMVGFAVQEHGVEAVLHFAASSLVGESMEQPFKYFGNNSAGSLKLLE------TLVGH 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAW------ 171 K RF+ ST ++G+ D D P P S Y +K YL+ LAW Sbjct: 108 GVK---RFVLSSTAALFGTPDALPIPADAPIRPESVYGESK----YLIERMLAWLQRTQG 160 Query: 172 -GHTYGIPVLLSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVR 221 G+T + S +G H PE LIP+ + + G +++ ++G DG VR Sbjct: 161 LGYTTLRYFNAAGASGRFGEDHRPESHLIPI-VLEVARGKRAYIPIFGDDYPTRDGTCVR 219 Query: 222 DWLYVEDHVRALYLVLKKGRIGE--RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 D+++V D A L ++ GE YN+G G + R+ +++ E+ Sbjct: 220 DYIHVLDLAEAHVLAVEALEPGEAHAYNLGNGTGFSVREVVEVCREV-----------TG 268 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 H R + R G DSS + E+GW PQ Sbjct: 269 HEIPERVLPRRAGDPAALVADSSLLTQELGWRPQ 302 >gi|206970412|ref|ZP_03231365.1| UDP-glucose 4-epimerase [Bacillus cereus AH1134] gi|206734989|gb|EDZ52158.1| UDP-glucose 4-epimerase [Bacillus cereus AH1134] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENSIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEE-----MC---ADSWKWQ 328 >gi|163795685|ref|ZP_02189650.1| NAD dependent epimerase/dehydratase family protein [alpha proteobacterium BAL199] gi|159178981|gb|EDP63516.1| NAD dependent epimerase/dehydratase family protein [alpha proteobacterium BAL199] Length = 337 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 132/324 (40%), Gaps = 34/324 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG + L+ + +V ID LT LN +L D D Sbjct: 8 VVTGGAGFIGGHMVDLLL-ERGYRVRAIDNLTGGRELNLAHHGDNQDLVR----DFRDIR 62 Query: 64 CIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K F + +FA + SI E++ N+ GT +LE R Sbjct: 63 SLAPDDKAFTGVRYVFHFAGIGDIVPSIERPIEYMDVNVQGTVRVLEAAR---------H 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ ++ YG D ED P P PY+ +K + W YG+PV Sbjct: 114 AGATKFVYAASSSCYGLADTPT-REDHPIGPEHPYALSKYQGEQAAFHWNRIYGLPVNSV 172 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YG + + + + I G + + GDG RD+L+V D RA + Sbjct: 173 RIFNAYGTRSRTSGAYGAVFGVFLRQKIAGEPLTVVGDGTQSRDFLFVTDIARAFLAAAE 232 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + GE +N+G +N + + L++ L K+ I RPG D+ Sbjct: 233 TDKTGEIWNLGASNPQS-------VNRLVELLGGKAIH-------IPKRPGEPDCTWADT 278 Query: 299 SKIKSEIGWFPQENMESGLNKTVC 322 +KI ++ W PQ E G+N+ + Sbjct: 279 AKIMRDLDWQPQVEFEDGVNRMLA 302 >gi|158423195|ref|YP_001524487.1| NAD-dependent epimerase/dehydratase family protein [Azorhizobium caulinodans ORS 571] gi|158330084|dbj|BAF87569.1| NAD-dependent epimerase/dehydratase family protein [Azorhizobium caulinodans ORS 571] Length = 357 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 42/343 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ VTGGAGF+GS LC L+ +VL ID Y G +++ + + F ++ DI Sbjct: 30 RIAVTGGAGFVGSHLCEALLGRGH-EVLCIDNF-YTGARVNVQHLLGNPRFELMRHDITF 87 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I D I N A + + + T++IG + L Sbjct: 88 PLYIEV-------DEIYNLACPASPVHYQFDPVQTVKTSVIGAI----------NALGLA 130 Query: 122 KKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + LQ ST EVYG + +G + P P S Y K ++ L + + Sbjct: 131 KRLRVPVLQASTSEVYGDPEVHPQPEGYWGNVNPIGPRSCYDEGKRCAETLFFDYHRQHQ 190 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 I + + N YGP P +++ I + + G + ++GDG R + YV+D VR L Sbjct: 191 IAIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGEDITVFGDGSQTRSFCYVDDLVRGLI 250 Query: 235 LVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 +++ K IG NIG E F I L + +I + S + +I +D P Sbjct: 251 AMMESPKDVIGP-INIGNPAE-------FTIRQLAEQVIALTGSRSRIIEKPLPQDDP-- 300 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 ++ D S+ + +GW P +E GL T+ Y D RP Sbjct: 301 -KQRQPDISRARDTLGWGPTVQLEQGLKATIA-YFDRLLSHRP 341 >gi|254384395|ref|ZP_04999737.1| UDP-glucose 4-epimerase [Streptomyces sp. Mg1] gi|194343282|gb|EDX24248.1| UDP-glucose 4-epimerase [Streptomyces sp. Mg1] Length = 319 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 152/343 (44%), Gaps = 59/343 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 R +VTGGAG+IGS + L+ + +V V+D L+ G + + E + L Sbjct: 3 RYLVTGGAGYIGSVVVARLL-EAGHRVTVLDDLSTGAPGAVPAGAEFVRGGLGQA----- 56 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +AL A+++FAA S V S+ D++ N+ G+ L+ R Sbjct: 57 -------AALLSADYAAVLHFAASSQVAESVRDPDKYWRNNVTGSLELMAAMR------- 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + ST VYG ++ +ED P+SPY ATK + D+L+ +G+ Sbjct: 103 --NADVRTLVFSSTAAVYGEPERLPIAEDARTAPTSPYGATKLAVDHLISGEAAAHGLAA 160 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDWL 224 + ++ +G H PE LIPL I ++ G H+ ++G DG VRD++ Sbjct: 161 VSLRYFNVAGAHAGHGERHEPESHLIPL-ILQVALGRRPHIDVHGDDYPTRDGTCVRDYI 219 Query: 225 YVEDHVRALYLVLKKGRIGERY--NIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +V D A L L+ R GE N+G G R+ ID V + ++ E Sbjct: 220 HVADLAEAHLLALEAARPGEHLICNLGNGEGFTVREVIDSVRRV---------TGHAIPE 270 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 ++R RPG +++ + +GW P+ +GL+ V Sbjct: 271 IVR--PRRPGDPAVLVASAARARERLGWRPR---RAGLDSIVA 308 >gi|218781939|ref|YP_002433257.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218763323|gb|ACL05789.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 325 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 39/342 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS---FLQV 57 MR+++TGGAGFIGS L + +V VID L+ G+L++L + + ++ F+ V Sbjct: 1 MRILITGGAGFIGSHLAEAYLKQGD-EVYVIDDLS-TGSLDNLAHLQANEEYAKRLFVHV 58 Query: 58 D-ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D I + + + + D + + AA V + I NI GT ++L+ Sbjct: 59 DTILNHDILLQMIG--TCDVVFHMAAAVGVQYILDNPLRSIRINIRGTEMVLD------L 110 Query: 117 CLSQDKKDQFRFLQISTDEVYGS-LDKGLFSED-MPYNPSS----PYSATKASSDYLVLA 170 C KK L S+ EVYG L L D + Y PSS Y+A+K ++ LA Sbjct: 111 CAKFKKK----VLIASSSEVYGKHLHAPLVETDNIIYGPSSKFRWSYAASKLMDEFTALA 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 G+ ++ N GP +IP +++ + G + +YGDG+ R + YVED Sbjct: 167 HHRENGLEAIVVRFFNTVGPRQTGTYGMVIPRLVSQALTGKDLTVYGDGEQSRTFTYVED 226 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPK--SYSHTELIRFIE 285 V+A+ L++K GE +NIGG E D+ ++I + K S S +LI + E Sbjct: 227 VVKAVMLLVKHPEAAGEVFNIGGVEEISIKDLAYKI-------VEKVGSSSQVKLIPYEE 279 Query: 286 DRPG--HDRRYAIDS-SKIKSEIGWFPQENMESGLNKTVCWY 324 P D + + S K+K+ G+ P ++ + L+K + ++ Sbjct: 280 AFPADFEDMQRRLPSIEKLKNLTGYAPTTDLNAILDKVIEFF 321 >gi|124515847|gb|EAY57356.1| UDP-glucose 4-epimerase [Leptospirillum rubarum] Length = 323 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 42/329 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +IVTGGAG+IGS + R L+ + + +++D L++ KE++ + DI D Sbjct: 2 IIVTGGAGYIGSHMVRVLIEN-GFETVILDNLSHG-----TKEVAVQTGAPLVVGDIRDP 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S + +A+++FAA V S+ ++ N+ GT +LE R + Sbjct: 56 RALTSLFSHYPIEAVIHFAAAIEVGESVQDPLKYWDNNLNGTLRILETMRSFGVR----- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST VY G +E+ +P +PY TKA+++ LV A H +G+ ++ Sbjct: 111 ----NLILSSTAAVYSPKSDGPITEEDRIDPQNPYGETKAAAERLVEACRHAFGVSSVIF 166 Query: 182 -----SNCSNNYG--PYHFPEK-LIPL---AITRMIEGSHVF----LYGDGQNVRDWLYV 226 + +YG + P LIP AI+ I VF DG VRD+++V Sbjct: 167 RYFNAAALEPSYGLVSHAIPRSHLIPAVLDAISGRIPALRVFGNDYPTPDGTGVRDYIHV 226 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A + LK KG I +N+G +D++ + +P R Sbjct: 227 MDLAEAHLVALKRLLKGEISGTFNLGTGQGHSVLDVIRTAEKVTGKKVP--------YRI 278 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 RPG ++ + + WFP + Sbjct: 279 EARRPGDVSMLVASGTRARQTLPWFPSRS 307 >gi|289666323|ref|ZP_06487904.1| nucleotide sugar epimerase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 321 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNSYYDPQLKHDRVAALCPGLDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIKVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVAW 312 >gi|228923994|ref|ZP_04087271.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835793|gb|EEM81157.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 330 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE +++ K Sbjct: 57 SFLRDVFKKENIEAVMHFAADSLVGVSMEQPLQYYNNNVYGALCLLE-------VMNEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + S G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++ W P+ Sbjct: 280 APRRAGDPGRLVASSKKAKEKLEWDPK 306 >gi|215919052|ref|NP_819849.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] gi|206583937|gb|AAO90363.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] Length = 331 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 68 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H YG Sbjct: 115 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHHRYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 172 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 231 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 232 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKNR 285 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 286 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIEW 314 >gi|197287002|ref|YP_002152874.1| nucleotide sugar epimerase [Proteus mirabilis HI4320] gi|194684489|emb|CAR46254.1| nucleotide sugar epimerase [Proteus mirabilis HI4320] gi|302378466|gb|ADL32300.1| Gla [Proteus mirabilis] Length = 336 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 M+ +VTG AGFIG L + L+ + V+ ID L ++ +LKE ++Q + FSF Sbjct: 1 MKYLVTGAAGFIGFHLIKKLIQQGET-VVGIDNLNDYYDV-ALKEARLNLLNQLDNFSFS 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +D+ DRE I + + D +++ AA++ V S++ + +N+ G +LE Sbjct: 59 FIDLADREKIAQLFEIEKFDRVIHLAAQAGVRYSLINPFSYADSNLTGFLTILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + K + S+ VYG D+ FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHNNVK---HLVYASSSSVYGLNDELPFSPHDQANHPVSLYAATKKANELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + +I + +Y G+ RD+ YVED V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTKAIINNQPIDIYNHGEMKRDFTYVEDIVEGVT 229 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ YNIG + +D + + L K+ Sbjct: 230 RIADVIPTAQQDWKVSTGTPADSSAPYKVYNIGNGSPVNLMDYISALEIHLGKKADKN-- 287 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+ + G+ PQ +++ G+ + V WY Sbjct: 288 ------MLPMQPGDVYTTWADTEDLFKATGYKPQTSVDEGVKQFVDWY 329 >gi|326486468|gb|ADZ76295.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 357 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/325 (27%), Positives = 156/325 (48%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PDAI + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 80 YSSLQKLFESQRPDAIFHLAAQSYPKTSFEIPIETLQTNIIGTANILENIRI---LKAKD 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 137 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 195 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 196 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 254 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG++ GE +NI G F++ ++D L+ +S + I+ +D Sbjct: 255 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILL--GFSIRKDIKVEQDEQR 305 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 306 LRPIDADYQMFDNTKIKSFINWKPE 330 >gi|229087750|ref|ZP_04219873.1| UDP-glucose 4-epimerase 1 [Bacillus cereus Rock3-44] gi|228695585|gb|EEL48447.1| UDP-glucose 4-epimerase 1 [Bacillus cereus Rock3-44] Length = 341 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 162/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ V+V+D L+ + +LN +KEI+ F F + D Sbjct: 1 MAILLTGGAGYIGSHTCIELLNN-GCDVVVVDNLSNSSVKSLNRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E I KE DA+++FA V S+ + NI T +L C Sbjct: 59 LLNHEAIDKIFKENAIDAVIHFAGFKAVGESVALPLTYYHNNISSTLVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + + + S+ VYG ++ +E+ P + ++PY TK ++ + + + Sbjct: 110 VMQKHNVKKLIFSSSATVYGIPEESPVTEEFPLSATNPYGHTKLMTEQILRDIAVADSEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 I +L ++ S G P P L+P +AI ++ E S + + DG + Sbjct: 170 SIALLRYFNPFGAHKSGRIGEDPNGIPNNLMPYVTQVAIGKLKELSVFGNDYPTKDGTCI 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + E YN+G +++V + IP Sbjct: 230 RDYIHVVDLADGHVKALDKVLHTKGV-EAYNLGTGRGYSVLEMVQAFEKISGRAIP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + I RPG D SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKIIGRRPGDVAVCFADISKAKHELGWEAKRGIEE-----MCL---DSWKWQ 328 >gi|219847860|ref|YP_002462293.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219542119|gb|ACL23857.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 324 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 39/337 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG GF+G L YL+ D + +V + + +L E++ +Q D+ Sbjct: 1 MRALITGINGFVGGHLAEYLLADGRWEVWGLSR----SATITLPELAGK--VPVVQADLS 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT---FILLEETRLWWSC 117 D E A+ + +P+ I + A + V S + TN +G F+ L E R+ Sbjct: 55 DPEATMRAIVQVRPNVIFHLAGQPFVPESFRDPAGTLATNTLGALHIFLTLIEYRM---- 110 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 R L I T+E YG +D ED P P+SPY +KA+ L L + +++ Sbjct: 111 -------ATRVLVIGTNEEYGKIDPADLPIDEDTPLRPTSPYGVSKAAQSLLALQYHYSH 163 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE------GSHVFLYGDGQNVRDWLYVEDH 229 G+ ++ + GP E+ + A R I V G+ RD+ V D Sbjct: 164 GLDLVRVRPFTHIGPRQN-ERFVTAAFARQIARIELGLQPPVVQVGNLAAQRDFSDVRDV 222 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--R 287 V A L+ + G G YN+G I LLD L+ + E +R + R Sbjct: 223 VAAYALLAEHGESGAVYNVGSGR-------AVMIRELLDMLLAECSVPVE-VRLNPELMR 274 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P D+S++++ GW P+ + L+ + ++ Sbjct: 275 PIDIPVVVCDASRLRARTGWEPRYTLAETLHDILTYW 311 >gi|302872024|ref|YP_003840660.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302574883|gb|ADL42674.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 305 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 34/330 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V ++D L +GN +++ ++ F ++DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-ERGYDVCIVDNLL-SGNAHNINPKAK-----FYKLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ + ++ + + ++ AA+ V +S+ + N++GT LLE C+ Sbjct: 53 -RDNLEQVFEKNKIEYCIHQAAQVSVAKSMEDVWLDCSINVLGTVNLLE------YCVKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG E+ P P S Y +K +S+ V + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPKYIPIDENHPLRPESFYGLSKLTSEEYVRMFAHNFNFEYV 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM V ++GDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVVSIFCKRMQNNKDVVIFGDGTQTRDFIYVEDVAEANCIAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ + KN+ + +FEI I + + + RPG Sbjct: 223 ESSVSG-TFNL---STAKNVSVNELFEI-------ISGLTGYKRVPVYQSKRPGDIAHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + ++ +K+ G+ PQ ++ GL KTV +++ Sbjct: 272 LSNNLLKNVFGFSPQFSLLEGLKKTVEYFM 301 >gi|218232887|ref|YP_002370226.1| UDP-glucose 4-epimerase [Bacillus cereus B4264] gi|228961712|ref|ZP_04123319.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229082661|ref|ZP_04215123.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-2] gi|229153610|ref|ZP_04281788.1| UDP-glucose 4-epimerase [Bacillus cereus m1550] gi|296505872|ref|YP_003667572.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171] gi|218160844|gb|ACK60836.1| UDP-glucose 4-epimerase [Bacillus cereus B4264] gi|228630214|gb|EEK86865.1| UDP-glucose 4-epimerase [Bacillus cereus m1550] gi|228700646|gb|EEL53170.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-2] gi|228797988|gb|EEM44994.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326924|gb|ADH09852.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 160/351 (45%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEVIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLSTTGV-DAYNLGTGMGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E RPG D+SK K E+GW +E + W +N Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEEMCADSWKWQSNN 331 >gi|153868858|ref|ZP_01998592.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] gi|152074554|gb|EDN71396.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] Length = 378 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 +++VTG AGFIG L + L+ + +V+ +D L Y L L + + + F F ++ Sbjct: 45 KILVTGAAGFIGFHLSKRLL-ERGDEVIGLDNLNNYYDVELKRTRLARLEKHHHFRFFKL 103 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ I + + +VN AA++ V SI ++ +N++G LLE R Sbjct: 104 DLADRDSIAELFAREKINKVVNLAAQAGVRYSIENPYAYVDSNLVGFVNLLEGCR----- 158 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K + F F S+ VYG K FS + P S Y+ATK +++ + + H YG Sbjct: 159 --HHKIEHFVF--ASSSSVYGLNTKMPFSVHHNVDHPISLYAATKKANELMAHTYAHLYG 214 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + +IE + +Y G+ RD+ Y++D + + V Sbjct: 215 LPTTGLRFFTVYGPWGRPDMALFKFTKAIIEDKPIDVYNYGKMRRDFTYIDDIIEGVVRV 274 Query: 237 LKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L K YNIG NN ++++ I L L K+ + Sbjct: 275 LDKVPEANPTWSSDLPDPSSSPAPYRLYNIGNNNP---VELMHYIEVLEKNLGKKAEKN- 330 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G D + +++++G+ P+ +E+G+ + WY Sbjct: 331 ----MLPMQAGDVSATYADVNDLETDVGFKPKTTIEAGIKNFIEWY 372 >gi|14794892|gb|AAK73500.1|AF357202_3 AmphDIII [Streptomyces nodosus] Length = 344 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 21/330 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TG G GS L +L++ QV + + N + ++ SF+ D+ D Sbjct: 4 RALITGITGQDGSYLAEHLLSQ-GYQVWGL--IRGQANPRKFRVSRLASELSFVDGDLMD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + SA+ + QPD + N A S V S A+ N +G +LE R+ S LS Sbjct: 61 QGSLVSAVDKVQPDEVYNLGAISFVPMSWQQAELVTEVNGMGVLRVLEAIRMV-SGLSMS 119 Query: 122 K----KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + Q RF Q S+ E++G + + E ++P SPY A KA ++ + ++G+ Sbjct: 120 RTAGTEGQIRFYQASSSEMFGKVAETPQRETTLFHPRSPYGAAKAYGHFITRNYRESFGM 179 Query: 178 PVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRAL 233 + N+ P F + I LA+ R+ G G+ VRDW Y D+VRA+ Sbjct: 180 YAVSGMLFNHESPRRGQEFVTRKISLAVARIKLGLQDKLALGNMDAVRDWGYAGDYVRAM 239 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTELIRFIEDRPGHD 291 +L+L++ + Y I G E + F L K Y +L+ RP Sbjct: 240 HLMLQQD-APDDYVI-GTGEMHTVRDAVRFAFEHVGLDWKDYVVVDPDLV-----RPAEV 292 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 DSSK ++++GW P + + + V Sbjct: 293 EVLCADSSKAQAQLGWKPSVDFQELMRMMV 322 >gi|196041025|ref|ZP_03108322.1| UDP-glucose 4-epimerase [Bacillus cereus NVH0597-99] gi|228936732|ref|ZP_04099523.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|196028193|gb|EDX66803.1| UDP-glucose 4-epimerase [Bacillus cereus NVH0597-99] gi|228822941|gb|EEM68782.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 159/354 (44%), Gaps = 50/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T IL C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 K + +F+ S+ VYG +E+ P + ++PY TK + ++ G Sbjct: 110 VMQKHNVKKFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADGEW 169 Query: 178 PVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGSHVFLYG------DG 217 + L N +G P P L+P +A+ ++ E S ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELS---IFGNDYPTKDG 226 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV+AL VL+ + E YN+G +++V + IP Sbjct: 227 TGVRDYIHVVDLAKGHVKALEKVLRTKGV-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP- 284 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -------YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|161507824|ref|YP_001577788.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260103110|ref|ZP_05753347.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|160348813|gb|ABX27487.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260083091|gb|EEW67211.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|323466153|gb|ADX69840.1| UDP-glucose 4-epimerase [Lactobacillus helveticus H10] gi|328464842|gb|EGF36149.1| UDP-galactose 4-epimerase [Lactobacillus helveticus MTCC 5463] Length = 330 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 156/346 (45%), Gaps = 48/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMN-------- 105 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP 178 ++L S+ YG K +ED P NP +PY TK + ++AW GI Sbjct: 106 --DANVKYLVFSSSAATYGIPKKLPITEDTPLNPINPYGETKMMMEK-IMAWADKADGIK 162 Query: 179 --------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRD 222 V ++ + G H PE LIP + I G F ++G DG NVRD Sbjct: 163 YTALRYFNVAGASSDGSIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRD 222 Query: 223 WLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ VED + A L LK K + +N+G + N++I+ + IP + Sbjct: 223 YVQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMG--- 279 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K ++ +GW P+ EN++ + W+ Sbjct: 280 -----PRRGGDPDSLVADSTKARTVLGWKPKHENVDDVIATAWKWH 320 >gi|58580125|ref|YP_199141.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424719|gb|AAW73756.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 344 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M +++TG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 24 MTILITGAAGFIGAYTCRALAARSE-AVVGLDNYNRYYDPQLKHDRVAALCPGVDIRTLD 82 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 83 LTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 136 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 137 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 193 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +VED V + Sbjct: 194 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVEDIVAGVLGA 252 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 253 LDTPSSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 304 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 305 RTMADTQRAQAAFGFDPATPVERGLPQVVNW 335 >gi|292670398|ref|ZP_06603824.1| NAD-dependent epimerase/dehydratase [Selenomonas noxia ATCC 43541] gi|292647990|gb|EFF65962.1| NAD-dependent epimerase/dehydratase [Selenomonas noxia ATCC 43541] Length = 334 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 37/328 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI--- 59 +VTGGAGFIGS LC +++ + +V V+D L+ +G + +++ + F F++ DI Sbjct: 14 FLVTGGAGFIGSNLCEAILS-MGHRVRVLDNLS-SGYVKNIEGFRDNPKFEFVEGDIRDF 71 Query: 60 --CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 CDR C D +++ AA+ V SI E+ TNI+GT ++E Sbjct: 72 RTCDRVCR-------DVDYVLHHAADVSVPESIEKPLEYTITNIMGTVNMME-------- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K +F S+ VYG + L E++ S Y+ TK +++ + YG+ Sbjct: 117 -AAAKNGVKKFTYASSAAVYGDDETMLKREEIIGKRLSTYAVTKFAAEEYAHQYTMYYGL 175 Query: 178 PVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 N YG P +IP I ++ + GDG+ RD++YVED V+A Sbjct: 176 DCYGMRYFNVYGRRQDPNGAYAAVIPKFIECLLRDEPPTINGDGEQSRDFVYVEDVVQAN 235 Query: 234 YLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L GE YN+ + E+ ++ L+ K F +R G Sbjct: 236 LLACAAPHEVAGEAYNVASGKSSS----LNEMYAVISDLLGKDLKPV----FGPERKGDI 287 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 R D SKI +G+ P+ + E G K Sbjct: 288 RHSGADISKISKNLGYAPEYDFERGSRK 315 >gi|56962284|ref|YP_174009.1| UDP-glucose 4-epimerase [Bacillus clausii KSM-K16] gi|56908521|dbj|BAD63048.1| UDP-glucose 4-epimerase [Bacillus clausii KSM-K16] Length = 310 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 40/332 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DIC 60 ++TGGAGFIGS + + LV + +V ++D N N+ K+ + + ++V D Sbjct: 5 LITGGAGFIGSNIAKALVAKGE-KVKILD------NFNTGKKDNIAEFIDDVEVIDGDFT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 + + ++SALK Q D + + A V +SI E N+ GT LL+ E R+ Sbjct: 58 NEKTVQSALK--QVDVVFHQGAIPSVPKSIQNPIESNHANVSGTLQLLQGAVEARVS--- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ ++ YG + E +P NP SPY+ +K + + + + YG+ Sbjct: 113 ---------RFIYAASSSAYGDSETLPKHEQLPGNPMSPYAVSKYTGELYCKVFYNLYGL 163 Query: 178 PVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP P +IP I M+ ++GDG RD+ ++++ V A Sbjct: 164 ETVSLRYFNVFGPRQDPNSKYAAVIPSFIKAMLNDKPPTIFGDGTQSRDFTFIDNVVAAN 223 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L ++ GE NIGG +V EI LL I +Y +RPG + Sbjct: 224 LLAANAPKLQGESVNIGGGASIDLNSLVDEINVLLGKQIQANYG--------SERPGDVK 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + I + P + + GL +TV W+ Sbjct: 276 HSLADIHLAEKLIAYRPTVSFQEGLRQTVEWF 307 >gi|153208020|ref|ZP_01946554.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|120576220|gb|EAX32844.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] Length = 330 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 7 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 67 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H YG Sbjct: 114 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATKIAGEAMATAYHHRYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 171 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 230 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 231 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKNR 284 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 285 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIGW 313 >gi|315497290|ref|YP_004086094.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] gi|315415302|gb|ADU11943.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] Length = 328 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+ +VL +D + + G ++ ++ F F++ D+ Sbjct: 3 RILVAGGAGFLGSHLCERLIARGD-EVLCVDNI-HTGQKRNIHHLTDLKRFEFIRHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + T++IG L L Sbjct: 59 -----TFPLYLEVDEIYNLACPASPIHYQMDPVQTTKTSVIGAINL----------LGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + LQ ST EVYG + + F P P + Y K ++ L + +G Sbjct: 104 KRTRAKILQASTSEVYGDPEVHPQAESYFGRVNPAGPRACYDEGKRCAETLFFDYQRQHG 163 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP P +++ I + + G + LYG G+ R + +V+D + A+ Sbjct: 164 VDVRVMRIFNTYGPRMHPNDGRVVSNFIVQALRGEPLTLYGTGEQTRSFCFVDDLISAMI 223 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + KG + E N G E ++ E+ L S S ++ D PG R Sbjct: 224 SFMDIKGTVTEPVNFGNPQEFSMRELAQEVKRLTG-----SDSQVVMLPAPVDDPGRRRP 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + GW P + GL KT+ ++ Sbjct: 279 ---DIKRATALTGWEPTTPLSQGLEKTIRFF 306 >gi|222098726|ref|YP_002532784.1| udp-glucose 4-epimerase [Bacillus cereus Q1] gi|221242785|gb|ACM15495.1| UDP-glucose 4-epimerase [Bacillus cereus Q1] Length = 330 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ +P++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTHPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|88812089|ref|ZP_01127341.1| capsular polysaccharide biosynthesis protein I [Nitrococcus mobilis Nb-231] gi|88790593|gb|EAR21708.1| capsular polysaccharide biosynthesis protein I [Nitrococcus mobilis Nb-231] Length = 336 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/347 (23%), Positives = 155/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + +YL+ D +V+ +D L L L I + F F++ Sbjct: 1 MKFLVTGAAGFIGYHVAKYLL-DRGREVVGLDNLNDYYDVDLKLARLARIEDRDRFRFVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ +R+ + + + + D +++ AA++ V SI ++ +N++G +LE R Sbjct: 60 LDVAERDGMAALFRHERFDRVIHLAAQAGVRYSIEDPHAYVDSNVVGFMNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTY 175 + ST VYG+ + F+E +P + Y+ATK +++ + ++ H + Sbjct: 116 -----HNAVGHLVYASTSSVYGANTQMPFAEHQNVSHPLAIYAATKRANELMAHSYSHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++EG + +Y G + RD+ YV+D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAILEGRPIEVYNYGHHKRDFTYVDDIVEGVVH 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + YNIG + + ++++ I L D L K+ Sbjct: 231 ACDMVASADPTWRSDHPNPATAHAPFRLYNIGNS---RPVELLKYIELLEDCLGRKADK- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S + E+G+ P +E G+ + V WY Sbjct: 287 ----QLLPMQPGDVADTWADVSALSDEVGYQPNTPVEVGVERFVEWY 329 >gi|228942597|ref|ZP_04105131.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975529|ref|ZP_04136083.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982163|ref|ZP_04142454.1| UDP-glucose 4-epimerase [Bacillus thuringiensis Bt407] gi|228777588|gb|EEM25864.1| UDP-glucose 4-epimerase [Bacillus thuringiensis Bt407] gi|228784210|gb|EEM32235.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817096|gb|EEM63187.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943248|gb|AEA19144.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSIESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNREALDVVFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLASGHVKALEKVLSTTGV-DAYNLGTGTGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEATRGLEE-----MC---ADSWKWQ 328 >gi|192361703|ref|YP_001983881.1| NAD dependent epimerase/dehydratase family superfamily [Cellvibrio japonicus Ueda107] gi|190687868|gb|ACE85546.1| NAD dependent epimerase/dehydratase family superfamily [Cellvibrio japonicus Ueda107] Length = 335 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/358 (24%), Positives = 161/358 (44%), Gaps = 59/358 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL----NSLKEISQSNLFSFLQ 56 M+++VTG AGFIGS L + L+ +V+ ID L ++ + L ++ ++ F+ ++ Sbjct: 1 MKVLVTGTAGFIGSTLAKRLLARGD-EVIGIDNLNDYYDVQIKKDRLAHLTANSGFTDIR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ D+ I + K +PD +VN AA++ V S++ +I NI G +LE R + + Sbjct: 60 CNLEDKAAIDNVFKTHKPDRVVNLAAQAGVRYSLVNPQAYIDANITGFLNILEGCRHFGT 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 + S+ VYG + MP+ +P S Y+ +K +++ + Sbjct: 120 D---------NLVYASSSSVYG------LNTAMPFSVHNNVDHPVSLYATSKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H + IP YGP+ P+ + + +++ G + ++ G + RD+ Y++D Sbjct: 165 TYSHLFNIPTTGLRFFTVYGPWGRPDMALFIFTRKILAGEPIDVFNYGHHRRDFTYIDDI 224 Query: 230 VRALYLVL-------------------KKG--RIGERYNIGGNNERKNIDIVFEIGFLLD 268 V + L KG RI YNIG NN ++++ I L D Sbjct: 225 VEGVIRTLDNVAQPNSNWSGDKPDPATSKGPYRI---YNIGSNNP---VELLRYIEVLED 278 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 L K+ + + +PG + + ++G+ P +E G+ + V WY D Sbjct: 279 CLGKKATKN-----LLPMQPGDVPDTYANVDALIEDVGYRPTTPVEVGIERFVKWYRD 331 >gi|217962747|ref|YP_002341323.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|229141996|ref|ZP_04270521.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] gi|217066277|gb|ACJ80527.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|228641285|gb|EEK97591.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] Length = 330 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKRLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 D+F F ST YG +D L +E+ +P++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETMTSPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K K ++GW PQ Sbjct: 280 APRRAGDPARLVASSQKAKEKLGWDPQ 306 >gi|4097914|gb|AAD10232.1| putative GDP-D-mannose dehydratase [Anabaena sp. CA] Length = 359 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 35/325 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L +L+ +V I + T N + + I + + FL Sbjct: 6 RALITGITGQDGSYLSEFLLGQ-GYEVHGIIRRTSTFNTDRIDHIYEDPHKEGVRLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E QP I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVQPTEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q RF Q + E+YG + SE P+ P SPY+ K + + + + +YG Sbjct: 123 --QHRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYG 180 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I A+ R++ G LY G+ RDW Y +D+VR Sbjct: 181 LFACNGILFNHESPRRGET-FVTRKITRAVARIVAGKQKTLYMGNLDAKRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-----IRFIED 286 A++L+L++ + + Y I E ++ E+ F SH L + F E Sbjct: 240 AMWLMLQQDQPDD-YVI-ATGETHSVREFLELAF----------SHVNLDWQDYVEFDER 287 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFP 309 RP DS+K + ++GW P Sbjct: 288 YLRPAEVDLLIGDSTKAQQKLGWRP 312 >gi|88706947|ref|ZP_01104646.1| NAD-dependent epimerase/dehydratase [Congregibacter litoralis KT71] gi|88698869|gb|EAQ95989.1| NAD-dependent epimerase/dehydratase [Congregibacter litoralis KT71] Length = 263 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 16/263 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 MR++VTG AGFIG L L++D +++ +D L Y+ L + L ++ F+F Sbjct: 1 MRVLVTGAAGFIGFHLSHRLLDDGH-EIVGLDNLNDYYSVELKRDRLAQLQAREGFTFAN 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + DA+VN AA++ V S+ +I++NI G +LE R Sbjct: 60 LDLEDRSAMERLFADHALDAVVNLAAQAGVRYSLENPRAYISSNIDGFMNILECCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG + FS D +P S Y+ATK S++ + + H Y Sbjct: 116 -----HANTAHLIYASSSSVYGLNTQMPFSVHDNVDHPVSLYAATKKSNELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ YGP+ P+ + L ++ G + ++ GQ RD+ Y++D V + Sbjct: 171 GLRTTGLRFFTVYGPWGRPDMALFLFTKAILSGEPIKVFNQGQMRRDFTYIDDIVEGITR 230 Query: 236 VLKKGRIGER-YNIGGNNERKNI 257 +L K G++ G RK + Sbjct: 231 LLGKPAEGQQPMGFGPTRPRKQL 253 >gi|319957727|ref|YP_004168990.1| nad-dependent epimerase/dehydratase [Nitratifractor salsuginis DSM 16511] gi|319420131|gb|ADV47241.1| NAD-dependent epimerase/dehydratase [Nitratifractor salsuginis DSM 16511] Length = 351 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/368 (23%), Positives = 155/368 (42%), Gaps = 67/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGN--LNSL 43 M+++VTG AGFIG L + L+ D K++ + + G+ + Sbjct: 1 MKILVTGTAGFIGFHLAKRLLERGDEVVGLDNINDYYDPKVKYGRLRETGIEGDEAIEYA 60 Query: 44 KEISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 K + S + F+++++ DR I ++ + DA+ N AA++ V S+ ++ +NI Sbjct: 61 KPVQSSRYENYRFIKLNLEDRAAIEELFEKERFDAVCNLAAQAGVRYSLTNPHAYVDSNI 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPS 154 +G +LE R S+ VYG +E MP+ +P Sbjct: 121 VGFVNILEACR---------HNGVGHLAYASSSSVYG------LNETMPFSTHDNVDHPI 165 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+A+K S++ + + H YG+P YGP+ P+ + L ++E + +Y Sbjct: 166 SLYAASKKSNELMAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEDRPIDVY 225 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKN 256 G+ RD+ YV+D V L V+ G YNIG NN K Sbjct: 226 NYGEMQRDFTYVDDIVEGLVRVIDHPPKGNPEWSGKAPDPGSSRAPYKIYNIGNNNPVKL 285 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +D + I + K+ + +PG D S + ++G+ P+ ++ G Sbjct: 286 MDFITAIEEAIGKEAKKN--------LLPIQPGDVPATYADVSDLIEDLGYKPETPIKEG 337 Query: 317 LNKTVCWY 324 +N+ V WY Sbjct: 338 INRFVEWY 345 >gi|300123918|emb|CBK25189.2| unnamed protein product [Blastocystis hominis] Length = 323 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 146/336 (43%), Gaps = 43/336 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGFIG LC LV ++ V+ +D L S+ N+ SF ++ Sbjct: 1 MVCGGAGFIGCHLCTRLV-EMGHDVICVDNLLTG---------SKDNIRSFALINASPTS 50 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 S F D I N A + A T I TF E + L L Q + Sbjct: 51 I--SFFTTFVMDEIYNLACPA--------APIHYQTYPIKTF---ECSVLGIMNLLQLAR 97 Query: 124 DQ-FRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 D R L ST EVYG ED P P S Y K +++ ++ + Y + Sbjct: 98 DTGCRLLHASTSEVYGDPSVHPQREDYHGNVNPIGPRSCYDEGKRAAESIMFDYYRMYNL 157 Query: 178 PVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP+ P +++ I + + G + +YGDG R + Y++D + + L Sbjct: 158 DIRVIRIFNTYGPFMHPYDGRVVTNFIRQALRGEDITIYGDGSQTRSFQYIDDLIDGMIL 217 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHDRR 293 +++K I +N+G E F + L + ++ K+ S + ++ +D P R Sbjct: 218 MMEKDGITGPFNLGNPVE-------FTVKELAEKVVAKTGSKSRIVYMSLPKDDPCKRRP 270 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 D ++ K E+GW P+ ++ GL+K + + +W Sbjct: 271 ---DITRAKEELGWEPKVQLDQGLDKVIDYMRKIDW 303 >gi|21244627|ref|NP_644209.1| nucleotide sugar epimerase [Xanthomonas axonopodis pv. citri str. 306] gi|21110310|gb|AAM38745.1| nucleotide sugar epimerase [Xanthomonas axonopodis pv. citri str. 306] Length = 321 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNNYYDPQLKHDRVATLCPGLDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDREGLAALFDEIQPTRVVHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGHTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 L---KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSDAPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVEW 312 >gi|47568571|ref|ZP_00239270.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] gi|47554813|gb|EAL13165.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] Length = 338 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + D Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|162457220|ref|YP_001619587.1| UDP-glucose 4-epimerase [Sorangium cellulosum 'So ce 56'] gi|161167802|emb|CAN99107.1| Probable UDP-glucose 4-epimerase [Sorangium cellulosum 'So ce 56'] Length = 424 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 149/350 (42%), Gaps = 45/350 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD- 61 +++TGGAGFIGS L L+ + + VLV+D L+ G + E + + ++V +CD Sbjct: 67 VLITGGAGFIGSHLADELLRNGE-PVLVLDNLSR-GFVERNVERLKGRHGAGVEVRVCDV 124 Query: 62 --RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + +R A++ + + + AA+ + RS+ N GT +LE R Sbjct: 125 RDEQAVRDAVR--RASFVFHLAAQVAIARSVADPAHDFEVNARGTLNVLEALRRL----- 177 Query: 120 QDKKDQFRFLQISTDEVYGSL-----DKGL--------------FSEDMPYNPSSPYSAT 160 D+ F ST +VYG+L ++G SE P + SPY + Sbjct: 178 -DRPPPLLF--ASTSKVYGALPDLPIERGEERYRPLCETAREHGISESQPLDLRSPYGCS 234 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 + ++D VL + T+G+ ++ S YGP F + I + R I + LYGDG Sbjct: 235 RGAADQYVLDYARTFGLHAVVLRVSCVYGPPQFGNEDQGWIAHFVARAIRRDPITLYGDG 294 Query: 218 QNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD L++ED V AL + K G +NIGG + L + Sbjct: 295 LQVRDALFIEDLVDALLRARRALKPASGRAFNIGGG---PGTAVSLVDLLDLLEELDGRR 351 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 L + D P R Y D ++ GW P+ + GL W L Sbjct: 352 PVVSLAAWRRDDP---RYYVSDCRAFQALTGWAPRVALRDGLRALYQWRL 398 >gi|312134989|ref|YP_004002327.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] gi|311775040|gb|ADQ04527.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] Length = 305 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 157/329 (47%), Gaps = 34/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + V +ID L +GN+ ++ ++ F ++DI Sbjct: 1 MAVLVTGGAGFIGSHIVDKLI-ERGYDVCIIDNLI-SGNVRNINPKAK-----FYKLDI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + ++ + + ++ AA+ V +S+ + N++GT LLE C+ Sbjct: 53 -RNNLEEVFEKNEIEYCIHQAAQVSVAKSMEDVYLDCSINVLGTVNLLE------YCVKY 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ VYG E+ P P S Y +K +S+ + + H + + Sbjct: 106 KVK---KFIFASSAAVYGEPKYIPIDENHPLRPESFYGLSKLTSEEYIRMFAHNFNFGYV 162 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP P ++ + RM V ++GDG RD++YVED A + L Sbjct: 163 IFRYSNVYGPRQDPFGEGGVVSIFCDRMQNNKDVIIFGDGTQTRDFIYVEDVAEANCIAL 222 Query: 238 KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G +N+ KN+ + +FEI L +L Y + + + RPG Sbjct: 223 ESFVSG-TFNLSTG---KNVSVNELFEI---LSSL--TGYKNNPVYQ--PKRPGDIVHSC 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ +K E G+ PQ ++ GL +TV ++ Sbjct: 272 LANNLLKMEFGYVPQYSLLEGLKRTVEYF 300 >gi|212218311|ref|YP_002305098.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] gi|212012573|gb|ACJ19953.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] Length = 331 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 68 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H YG Sbjct: 115 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATKIAGEAMATAYHHRYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 172 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 231 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 232 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKNR 285 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 286 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIGW 314 >gi|85860464|ref|YP_462666.1| NAD-dependent epimerase/dehydratase family protein [Syntrophus aciditrophicus SB] gi|85723555|gb|ABC78498.1| NAD dependent epimerase/dehydratase family [Syntrophus aciditrophicus SB] Length = 318 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 143/328 (43%), Gaps = 30/328 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 V GG GFIGS + R L+ + V+V+ + N + S + ++ D D+ Sbjct: 13 VIGGTGFIGSFVVRALLRKGR-HVIVVAR-------NEVPTRSLPDNVEYVPGDFGDKYF 64 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 IR L+ D I++ A + S + I N+ +L+ S L+ +K Sbjct: 65 IRGILRGV--DEIIDLAYATVPKTSYDNPIQDILENLPPLVNMLDVA----SALNLEKI- 117 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 L S +YG +E+ P NP SPY TK + + + T+ +PV+ Sbjct: 118 ---VLISSGGVIYGHSLNTPINEEHPTNPISPYGITKLAVEKYARMFHLTHDLPVVCVRP 174 Query: 185 SNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N YG P + I AI ++ G + LYG+ VRD+++VED + L KG Sbjct: 175 GNAYGETQKPFIGQGFIAAAIASILCGLELTLYGESGTVRDYIHVEDIAEGIVAALLKGP 234 Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF--IEDRPGHDRRYAIDSS 299 G YNIG R N DI LDAL P + + ++ + R +DSS Sbjct: 235 PGSIYNIGSGEGRNNRDI-------LDALQPLAQAEGLEVKLKTLPLRKFDVPVNVLDSS 287 Query: 300 KIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + GW + E G+ +T WY DN Sbjct: 288 RLSWDTGWTMRIPFEDGIIRTWNWYRDN 315 >gi|304314541|ref|YP_003849688.1| UDP-glucose 4-epimerase (NAD dependent) related protein [Methanothermobacter marburgensis str. Marburg] gi|302588000|gb|ADL58375.1| UDP-glucose 4-epimerase (NAD dependent) related protein [Methanothermobacter marburgensis str. Marburg] Length = 307 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 44/335 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + VTGG GFIGS L L+ + +V VID L+ +G +L NL Sbjct: 4 MNVAVTGGLGFIGSHLTDELLR-MGNRVTVIDDLS-SGKRGNLMYPKHENL--------- 52 Query: 61 DRECIRSALKEFQPDAIV-------NFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 E I ++ E D++ + AA + V S+ N GT +L Sbjct: 53 --EIIEGSINEVDLDSVFMDKDYVFHQAALASVPESVRDPLRCHRVNATGTLRVL----- 105 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +C + +K + ST VYG+ + SED P SPY+ +K + +Y + Sbjct: 106 LAACRAGVRK----VVNASTSAVYGNNPEMPLSEDARPMPLSPYAVSKVTGEYYCSVF-E 160 Query: 174 TYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ + N YGP P+ +IP I +++G +YGDG+ RD++YV D Sbjct: 161 DYGLETVSLRYFNVYGPRQRPDSQYAAVIPRFIDAILQGRQPEIYGDGEQSRDFIYVGDV 220 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 VRA + + G +N+ + ++ +FEI I + F+++RPG Sbjct: 221 VRANIFLAESPETG-IFNVACGSA-VTVNRLFEI-------ISRILGSDSEPVFLDERPG 271 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+S++++ G+ P +E GL +TV W+ Sbjct: 272 DVRHSLADTSRLEA-TGFRPDVKLEEGLIRTVEWF 305 >gi|15827009|ref|NP_301272.1| sugar-nucleotide dehydratase [Mycobacterium leprae TN] gi|221229487|ref|YP_002502903.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae Br4923] gi|3097237|emb|CAA18814.1| putative sugar dehyratase [Mycobacterium leprae] gi|13092556|emb|CAC29712.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae] gi|219932594|emb|CAR70297.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae Br4923] Length = 319 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 152/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +VTG AGFIGS L L+ D V+ +D G+ +L+ ++ + +F++ DI Sbjct: 6 VRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-TGHAANLEHLASTPALAFVEADIV 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +++ L E +P+ + + AA+ V S++ + N+IGT L E R Sbjct: 64 TAD-LQTILDEHRPEVVFHLAAQIDVRHSVVDPQFDASVNVIGTVRLAEAAR-------- 114 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ +YG+ + E +P +P+SPY+A K + + + + H G+ Sbjct: 115 -HTGVRKIVHTSSGGSIYGTPSQYPTPETVPTDPTSPYAAGKVAGEIYLNTFRHLCGLDC 173 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + + ++ ++GDG + RD+++V+D V A Sbjct: 174 SHIAPANVYGPRQDPYGEAGVVAIFVQALLSDRPTKVFGDGTHTRDYVFVDDVVDAFIKA 233 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+R+NIG E + L + + + F R G +R + Sbjct: 234 SGDAGGGQRFNIGTGIETSDRQ--------LHTAVSAAVGGPDDPEFHPPRLGDLKRSCL 285 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + +GW PQ ++ G+ +TV ++ Sbjct: 286 DIGLATTVLGWSPQVQLDDGVRRTVEYF 313 >gi|311278979|ref|YP_003941210.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1] gi|308748174|gb|ADO47926.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1] Length = 334 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 14/237 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG +C L+ QV+ ID L Y +L + ++ S F+F ++ Sbjct: 1 MKFLVTGAAGFIGYHVCDRLLK-AGHQVVGIDNLNDYYDVSLKQARLDLLSSPDFTFHKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR + + E + D +++ AA++ V S+ + N+IG +LE R Sbjct: 60 DLADRVAMPALFAEEKFDRVIHLAAQAGVRYSLENPHVYADANLIGHLNVLEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K Q L S+ VYG K FS D P + P S Y+ATK +++ + + H Y Sbjct: 115 ---HNKVQ-HLLYASSSSVYGLNRKMPFSTDDPVDHPVSLYAATKKANELMAHTYSHLYN 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +P YGP+ P+ + M+EG + +Y G+ RD+ YV+D V A+ Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYVDDIVEAI 227 >gi|284046863|ref|YP_003397203.1| UDP-glucose 4-epimerase [Conexibacter woesei DSM 14684] gi|283951084|gb|ADB53828.1| UDP-glucose 4-epimerase [Conexibacter woesei DSM 14684] Length = 328 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 41/329 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS + + L+ +V+V+D L G+ ++ + ++ L++D+ Sbjct: 1 MKLLVTGGAGYIGSIVAQQLLAGGH-EVVVLDSLER-GHRAAVPDGAR-----LLEIDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + A+ E D ++FAA + V S+ + + N++G+ LL+ R Sbjct: 54 DAEAVVDAVAEGF-DGALHFAAYALVAESVARPEIYYRNNVLGSLNLLDGLR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG + E P P + Y A+K + D ++ +G+ + Sbjct: 105 -AAGVQRLVFSSTCAVYGEPEVVPMDETTPTRPVNSYGASKLAVDGMIADECRAHGLGAV 163 Query: 181 ------LSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVRDWLYV 226 ++ S G H+PE + + R +G V ++G DG VRD++++ Sbjct: 164 SLRYFNVAGASGCLGEDHYPETHLIPNVLRAAQGLQDAVKIFGTDYPTPDGTAVRDYIHI 223 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ED RA L L+ R E +N+G + +++ + + +P ++ Sbjct: 224 EDLARAHVLALEGARPSEHRIFNLGSGDGYSVREVIEAVRTVTGLDVP--------VQEA 275 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 RPG R + +I++E+GW P +++ Sbjct: 276 GRRPGDPPRLVAANGRIRAELGWAPTKSL 304 >gi|323703005|ref|ZP_08114661.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323532018|gb|EGB21901.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 306 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 147/336 (43%), Gaps = 39/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + L+ +VLV+D L+ N E+ F Q+DI Sbjct: 1 MRVLVTGGAGFIGSHIVDALLKAGH-EVLVVDNLSSGKKENLPPEVP------FYQMDIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + +P A+++ AA+ V S+ NIIGT LLE R Sbjct: 54 D-PGIAGIFEAARPQAVIHQAAQVAVPVSLRDPIFDARVNIIGTLNLLEAAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + S+ VYG+ + ED P S Y +K + + + A+ YG+ Sbjct: 105 -RVKVGKMVFASSAAVYGNPNYLPVDEDHDLRPLSGYGISKHTVERYLEAYQELYGLSWT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP + ++ + I +++ ++GDG+ RD++YV+D A L Sbjct: 164 ALRYANVYGPRQDAQGEGGVVAVFIDKLLHNQRPQIFGDGEQTRDFVYVKDVAAANVAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDI-----VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 G +N+ NI V E+ LL I + + RPG Sbjct: 224 SAG----------DNQILNISTGKASTVNELYSLLKQTIGSALEP----EYAPPRPGDIV 269 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D+SK + + W PQ + GL +TV YL N Sbjct: 270 HSYLDNSKAVARLNWQPQYELARGLKETVEHYLRGN 305 >gi|320354557|ref|YP_004195896.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM 2032] gi|320123059|gb|ADW18605.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM 2032] Length = 339 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQV 57 +++VTG AGFIG AL L+ + + V+ +D L Y L + L E+ F ++ Sbjct: 6 KILVTGAAGFIGHALTLRLLAEGR-SVVGLDNLNDYYDPQLKRDRLAELQAFAAFHHVEF 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + Q DA+VN AA++ V S++ ++ TN++G +LE C Sbjct: 65 DMADRERTAALFAREQFDAVVNLAAQAGVRYSLINPHSYVDTNLVGFVNILE------GC 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + S+ VYG+ + FS D +P S Y+A+K +++ + + H + Sbjct: 119 RHTGVK---HLVYASSSSVYGANTRMPFSVHDNVDHPVSLYAASKKANELMAHTYSHLFH 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + L ++E + ++ +G RD+ Y++D + V Sbjct: 176 IPTTGLRFFTVYGPWGRPDMALFLFTKAILEDRPINVFNNGNMERDFTYIDDIAEGVVRV 235 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + YNIG N + K ++ I L D L K+ + Sbjct: 236 IDHVASANSQWSGDQPDAATSYCPWRVYNIGNNKKEK---LMRYIEVLEDCLGKKARKN- 291 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ + G D + + +G+ P ++E G+ V WY Sbjct: 292 ----FLPLQDGDVPATYADVADLVQAVGFKPSTSIEQGIRNFVDWY 333 >gi|206976916|ref|ZP_03237818.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] gi|206744882|gb|EDZ56287.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] Length = 338 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 164/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ +++V+D L+ + ++N +KE++ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNN-DYEIIVVDNLSNSSIESINRVKELTGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + E + +E +A+++FA V S+ + NII T +L C Sbjct: 59 LVNYEALNKIFEENTIEAVIHFAGLKAVGESVAKPLMYYHNNIISTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQMMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL V+ + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALAKVMNTTGV-DAYNLGTGTGYSVLEMVEAFEKVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEAKHGLEE-----MC---ADSWRWQ 328 >gi|159903825|ref|YP_001551169.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9211] gi|159889001|gb|ABX09215.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9211] Length = 345 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 156/355 (43%), Gaps = 52/355 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEI--SQSNLFS 53 +VTG AGFIG+AL + L+ + + +V+ ID L L+ +++I S+ ++ Sbjct: 8 FLVTGAAGFIGAALVKKLLKNGE-KVIGIDDLNSYYDPGLKQARLDEIQKILKPSSSEWA 66 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++ + D + +R E P +VN AA++ V SI ++ +N++G F +LE R Sbjct: 67 FYKIGLEDMDSLRELFLEKSPSVVVNLAAQAGVRYSIENPSAYLNSNLVGFFNILELCR- 125 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWG 172 + S+ VYG F E P N P S Y+ATK S++ + ++ Sbjct: 126 --------HHSVENLIYASSSSVYGGNRNLPFVETQPVNHPVSFYAATKKSNELMAHSYS 177 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y IP YGP+ P+ + P+ + I G + +Y G+ +RD+ Y++D Sbjct: 178 HLYKIPATGLRFFTVYGPWGRPD-MAPMIFAKAIFSGKPINIYNQGEMLRDFTYIDDIAE 236 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDI----VFEIGFLLDALIPKSYSHTELIRFIE-- 285 +L K N N + + +F IG + EL+RFIE Sbjct: 237 SLLRCCYKPATPNS-NFDSLNPDPSSSLASHRIFNIG---------NSEPIELLRFIELL 286 Query: 286 --------------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + G A D++ ++ I + P+ ++E G+ WY D Sbjct: 287 EDSLGIRAIKNMLPMQLGDVVATAADTNLLEKWIDFRPRTSIEEGVKMFTKWYRD 341 >gi|312137298|ref|YP_004004635.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] gi|311225017|gb|ADP77873.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] Length = 330 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG IGS L R L +L V+++D L+ + N I + F++ DI D Sbjct: 12 VLVTGGAGCIGSNLSRKLA-ELGANVIILDNLSSSYKWN----IPKHENIVFVEGDILDD 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ KE +PD + + AA S+ + + N +GT +LE +L Sbjct: 67 EILKRVYKE-RPDYVFHLAAHFANQNSVDHPETDLLVNGLGTLKVLEYAQL--------- 116 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VYG K F ED + + +PY TK + + + Y +P++ Sbjct: 117 VGVERFVYASSGCGVYGLDSKIPFKEDDVSISLHTPYQVTKLLGELYCNYFYNLYDLPIV 176 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LV 236 + N YGP P K +IP ++G + + G G RDW +V D VR L + Sbjct: 177 NARFFNAYGPGEVPGKYRNVIPNFFYWAMQGKPLPITGTGNETRDWTFVGDIVRGLLKMG 236 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++K IGE N+G E K I++ A I + E R D + + Sbjct: 237 VRKKAIGEAINLGSGKEHKVIEL---------AKIVNELTGNEAGVVYVGRREWDVKTRL 287 Query: 297 DSS--KIKSEIGWFPQENMESGLNKTVCWYLDN 327 SS K K + + P+ + GL T W+++N Sbjct: 288 LSSIEKAKKLLDYEPKVSFREGLEITYKWFVEN 320 >gi|163848236|ref|YP_001636280.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222526146|ref|YP_002570617.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163669525|gb|ABY35891.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222450025|gb|ACM54291.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 324 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/360 (25%), Positives = 149/360 (41%), Gaps = 61/360 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQV--------LVIDKLTYAGNLNSLKEISQSNLF 52 MR ++TG GF+G L YL+ D + V LV+ +L GN+ Sbjct: 1 MRALITGINGFVGGHLAEYLLADGRWDVWGLSRSPSLVLPELI--GNVQ----------- 47 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT---FILLE 109 +Q D+ D E AL + +P+ I + A + V S + N +G F+ L Sbjct: 48 -IVQADLADAEATTRALVQVRPNVIFHLAGQPFVPESFRDPAGTLAANTLGALHIFLTLI 106 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYL 167 E R+ R + I T+E YG +D ED P P+SPY +KA+ L Sbjct: 107 EYRM-----------TTRVIVIGTNEEYGKIDPEDLPIDEDTPLRPTSPYGVSKAAQSLL 155 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE------GSHVFLYGDGQNVR 221 L + +++G+ V+ + GP E+ + A R I V G+ R Sbjct: 156 ALQYHYSHGLDVVRVRPFTHIGPRQN-ERFVTAAFARQIARIELGLQPPVVQVGNLAAQR 214 Query: 222 DWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D+ V D V A L+ + G GE YN+G I LLD L+ + E + Sbjct: 215 DFTDVRDVVAAYALLAEHGESGEVYNVGSGR-------AVMIRELLDMLLAECTVPVE-V 266 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELK 339 R + RP D+S++++ GW P+ + L+ + N+W + E++ Sbjct: 267 RLNPELMRPIDIPLVVCDASRLRARTGWQPRYTLAETLHDIL------NYWRARVRAEVQ 320 >gi|284123344|ref|ZP_06386926.1| nucleotide sugar epimerase [Candidatus Poribacteria sp. WGA-A3] gi|283829266|gb|EFC33673.1| nucleotide sugar epimerase [Candidatus Poribacteria sp. WGA-A3] Length = 346 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 30/341 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSN----L 51 L+VTG AGFIGS + LV +V+ +D L N++ +++ + N Sbjct: 17 LLVTGAAGFIGSHTAQALVARGD-RVVGLDNLNDYYDPARKRANVDEVRQALRQNGSGEA 75 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F+F+Q DI +R+ + + + IV+ AA + V SI + NI GT LL+ Sbjct: 76 FTFIQGDIRNRQTVEEIFLSHEIEGIVHLAAMAGVRVSIENPHLYCDVNINGTLNLLDVA 135 Query: 112 RLWWSCLSQDKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVL 169 S+ ++ F F+ ST VYG+ F E P + P +PY+A+K + + L Sbjct: 136 --VGRIGSRTRRVSFPTFVFASTSSVYGNTQAVPFQEHDPCDRPLAPYAASKKAGELLGY 193 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+P YGP P+ + + + G V LY G RDW +V D Sbjct: 194 SYHHVYGLPFTAVRFFTVYGPRGRPDMMAYKVLDNICFGHEVPLYNSGNMYRDWTFVGDI 253 Query: 230 VRALYLVLKKGRIGERYNIGGNNER---KNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 V+ + + + E N+G + + ++ E +++ ++I Sbjct: 254 VQGVVSAVDRPFGYEVINLGRGEPTSLAEFVQVIEECVGQKASVVSAPMPEADII----- 308 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK + +G+ PQ + G+ + WY N Sbjct: 309 ------STCADISKARELLGYVPQFTVHEGVRQFWVWYQKN 343 >gi|37520637|ref|NP_924014.1| nucleotide sugar epimerase [Gloeobacter violaceus PCC 7421] gi|35211631|dbj|BAC89009.1| nucleotide sugar epimerase [Gloeobacter violaceus PCC 7421] Length = 348 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 41/343 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNL---- 51 M++++TG AGFIG L L+ + +V ID NLNS LKE + L Sbjct: 1 MKVLITGVAGFIGYHLAARLLQEGS-KVYGID------NLNSYYDVRLKEARLARLVPHP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F +DI R + + D +V+ AA++ V S+ ++ +N+ G LLE Sbjct: 54 QFTFRHLDIARRPAMFELFESESFDCVVHLAAQAGVRYSLKNPFAYVDSNLSGFVNLLEC 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG+ K FS D +P S Y+ATK +++ + Sbjct: 114 CR---------TSGIGHLVYASSSSVYGANTKAPFSVSDNVDHPVSLYAATKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ H Y +P YGP+ P+ + + G + +Y G RD+ Y++D Sbjct: 165 AYSHLYALPTTGLRFFTVYGPWGRPDMAYFKFVQAIEAGKPIDVYNHGHMQRDFTYIDDI 224 Query: 230 VRALYLVLKK-----GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V + +L + G R YNIG + I+ + +I ++ + Sbjct: 225 VEGIVRLLPRVPTHAGAAPYRIYNIGNHQPVSLIEFI--------EVIEQALGKRAVKNL 276 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + E+G+ P + G+ + VCWY D Sbjct: 277 LPMQPGDVPATCADVDDLMREVGFKPSTPLTVGIERFVCWYRD 319 >gi|218134430|ref|ZP_03463234.1| hypothetical protein BACPEC_02333 [Bacteroides pectinophilus ATCC 43243] gi|217989815|gb|EEC55826.1| hypothetical protein BACPEC_02333 [Bacteroides pectinophilus ATCC 43243] Length = 314 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 150/331 (45%), Gaps = 30/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +V GG GF+G+ L +L +DL +V V T NL + + NL D+ Sbjct: 1 MKALVIGGGGFVGTYLVNHLHDDLGYEVAVTK--TSKENL-KMADAQTYNL------DVL 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +++ IR L E PD I++ AA+S V + I NI G+ +L+ R Sbjct: 52 NKDQIREVLTEVHPDYIIHLAAQSSVAFAWKNPTLTIDVNIKGSVNVLDVVR------EL 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D K R L I + E YG + +G ED P + Y+ATKA + + + Y + Sbjct: 106 DYKP--RVLLIGSGEEYGHIREGETPIVEDNNTRPGNIYAATKACQNMIGKIYADAYEMD 163 Query: 179 VLLSNCSNNYGPYHFPEKLIP---LAITRMIEGSH--VFLYGDGQNVRDWLYVEDHVRAL 233 V++ N+ GP P ++ + ++ G V G+ RD+ V D V+A Sbjct: 164 VMMVRAFNHIGPNQAPMFVVADFCRQVAQIEAGLQKPVIYVGNLSARRDFTDVRDVVKAY 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+++ G+ GE YN+G +I+ EI L D I + ++ RP Sbjct: 224 ALLVRLGKRGETYNVGSGRAVSIQEILEEILELSDVDIEVAIDQDKI------RPVDVPI 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D KI + GW PQ +++ L +T+ ++ Sbjct: 278 IEADIQKIYNCTGWEPQISLKQTLKETLDYW 308 >gi|225350701|ref|YP_002720657.1| NAD-dependent epimerase/dehydratase [Brachyspira hyodysenteriae WA1] gi|225216385|gb|ACN85118.1| NAD-dependent epimerase/dehydratase [Brachyspira hyodysenteriae WA1] Length = 316 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 35/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE----------ISQSN 50 M +++TG AGFIGS L L+ + V+ ID NLN + + Sbjct: 1 MNILLTGVAGFIGSNLLDKLLTNKDHTVIGID------NLNDFYDPLIKQNNIKNNINNK 54 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F +D+ + ++ + + D +++ A V SI +I NI+ T +LE Sbjct: 55 NFIFYNIDLLNTSELKKIFENNKIDNVIHLAGYGGVRPSIENPKLYIDNNIVATLNILE- 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVL 169 C+ K + + S+ VYG+ + +F E + + P SPY+ TK + + L Sbjct: 114 ------CMKNHKIQKLVYA--SSSSVYGNSKETIFKETLNVSEPISPYAMTKKACEELCY 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + Y I V+ YG P+ I ++E + + ++GDG +RD+ Y+ED Sbjct: 166 TYNKLYNIKVIALRFFTVYGKRQRPDLAISKFTKLILENNPIPVFGDGSTMRDYTYIEDI 225 Query: 230 VRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V + ++ + E N+GG E N++ + + I +I +E + Sbjct: 226 VSGIISAIEYNKTNYEIINLGG-GEPINLERMIKT-------IETVLGKKAIINRMEMQK 277 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G + D +K ++ + + P + E+G+ K V WY+ Sbjct: 278 GDVDKTVADITKARNLLNYNPSTSFENGIKKFVDWYI 314 >gi|291566909|dbj|BAI89181.1| putative CDP-glucose 4,6-dehydratase [Arthrospira platensis NIES-39] Length = 331 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 31/331 (9%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +TG G +G + LV K+ LV D + + L + S+ + ++ + D Sbjct: 10 VFLTGCTGLLGGWMVTELVQRGAKVTGLVRDSVPQS----RLYTDNWSDKINIVRGCVED 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I A+ E+Q D + + A++ V +++ LG E NI GT+ +LE R Sbjct: 66 LPTIERAIAEYQVDTVFHLGAQTLVGVANQNPLGTFE---ANIKGTWNILEACR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R L S+D+ YG + ++E P PY +K+ +D + + +YG+P Sbjct: 117 --QVGGVSRILIASSDKAYGDQEILPYNETAPLQGQHPYDVSKSCADLISRTYYVSYGLP 174 Query: 179 VLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV 236 V ++ C N YG +++P I + V L DG +RD+ YV+D V A L+L Sbjct: 175 VCVTRCGNFYGGGDLNFNRIVPDTIRSALREQPVTLRSDGSYIRDYFYVKDGVLAYLHLA 234 Query: 237 LKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + R GE +N + +++V +I A++ K+Y ++ ++ H Sbjct: 235 EQMERKEIWGEAFNFSNELQITVLELVQKI----LAVMNKNYLQPVILNQAKNEIKHQ-- 288 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W PQ ++ESGL +T+ WY Sbjct: 289 -YLSAKKARKMLSWQPQYSLESGLKETIDWY 318 >gi|289671104|ref|ZP_06492179.1| nucleotide sugar epimerase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 321 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNSYYDPQLKHDRVAALCPGLDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 LKKG---RIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPGSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRARAAFGFDPATPVERGLPQVVAW 312 >gi|42519635|ref|NP_965565.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227889421|ref|ZP_04007226.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|268320008|ref|YP_003293664.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|41583924|gb|AAS09531.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227849899|gb|EEJ59985.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|262398383|emb|CAX67397.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|329667889|gb|AEB93837.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 149/330 (45%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS R L+ + V+V+D L Y G+ ++ + ++ F Q DI Sbjct: 1 MRVLVIGGAGYIGSHAVRKLIEEGN-DVVVLDSL-YTGHRKAVDKRAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ DA+++FAA S V S+ ++ N+ G LL+ + Sbjct: 54 DTNLVSKILRDENIDAVMHFAAYSLVGESVKKPLKYYDNNVSGMISLLQAM--------E 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +K +ED P NP +PY TK + ++ GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPEKLPITEDTPLNPINPYGETKMMMEKIMHWADKANGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAIAGDGNFTIFGDDYNTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V+ + + +N+G N++I+ + IP + Sbjct: 225 QVEDLIDAHILALKHVMDTNK-SDVFNLGTAQGYSNLEILEAAKKVTGIDIPYTIGAR-- 281 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G DSSK + +GW P+ Sbjct: 282 ------RGGDPDSLVADSSKARKVLGWKPK 305 >gi|86130457|ref|ZP_01049057.1| NAD dependent epimerase/dehydratase family protein [Dokdonia donghaensis MED134] gi|85819132|gb|EAQ40291.1| NAD dependent epimerase/dehydratase family protein [Dokdonia donghaensis MED134] Length = 332 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 28/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +C L+ + I V +D L G+ ++L I + F+F++ DI D Sbjct: 14 ILVTGGAGFIGSNICEVLIKNGAI-VTCLDNLA-TGHRHNLDAIIDHSNFTFIEGDIRDI 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A+ Q D +++ AA V RSI N+ G +L S+DK Sbjct: 72 ETCKKAVS--QSDYVLHQAALGSVPRSIKDPATSNEVNVGGFLNML--------IASKDK 121 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + RF+ ++ YG ED+ P SPY+ TK ++ + TYGI + Sbjct: 122 GVK-RFVYAASSSTYGDSQGLPKQEDIIGKPLSPYAITKYVNELYADVFHKTYGIDCIGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRALY 234 N +G P +IP ++ + GDG RD+ Y+++ ++RA+ Sbjct: 181 RYFNVFGRKQDPNGAYAAVIPKFTKLLMNQESPVINGDGSYSRDFTYIDNVIEMNIRAM- 239 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIEDRPGHDR 292 L K + YN+ ER ID+ I L L S S+ E+I F +R G Sbjct: 240 LSKNKQALNTVYNV-AYGER--IDLTELIKILKKELSFFDSSISNVEVI-FGPNRVGDVP 295 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +K K +G+ P+ ++ GL + V WY DN Sbjct: 296 HSLADINKAKKLLGYNPEYSVRQGLVEAVKWYYDN 330 >gi|257052080|ref|YP_003129913.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690843|gb|ACV11180.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 306 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 35/320 (10%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS L LV ND V+V+D NL++ K + + +F++ D+ Sbjct: 11 VLITGGAGFIGSHLADALVEHND----VIVLD------NLSTGKRENVPDGATFVEGDVR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D I + AA V+RSI N GT LLE R Sbjct: 61 DADVVADVSDGV--DLIFHKAAVVSVERSIDEPAFSHEVNFDGTLTLLEAAR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + S+ +YG D +E P +P SPY K ++D + A+ YG+ + Sbjct: 111 --RVDARVVFASSAAIYGDPDTLPITESDPVDPQSPYGIDKCAADQYLRAYHDLYGLETV 168 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP +I + + G + + GDG RD+++V D V A L Sbjct: 169 ALRYFNAYGPRQTASDYSGVISIFGEQARAGEPITVNGDGTQTRDFVHVSDVVTANLLAA 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G YNIG E + I + P I + RPG +R D Sbjct: 229 TTEHVGTAYNIGTGGETSIRSLAETIQATVGTDSP--------IVHGDPRPGDIQRSRAD 280 Query: 298 SSKIKSEIGWFPQENMESGL 317 + + +G+ P +E+GL Sbjct: 281 ITTARERLGYEPSVPLETGL 300 >gi|217962750|ref|YP_002341326.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|229141999|ref|ZP_04270524.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] gi|217067390|gb|ACJ81640.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|228641288|gb|EEK97594.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] Length = 342 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N+ +++V+D ++ + ++N +KEI+ F F + D Sbjct: 3 MAILVTGGAGYIGSHTCVELLNN-DYEIIVVDNISNSSVESINRVKEITGKQ-FKFYKED 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 61 ILNREALDTIFEENTIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 112 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 171 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 172 SIALLRYFNPFGAHESGRIGENPNGIPNNLMPYVTQVAVGKLKELSVFGNDYSTKDGTGV 231 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 232 RDYIHVVDLANGHVKALEKVLGTTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP---- 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW +E +C ++W W+ Sbjct: 287 ----YKITERRPGDVAVCFADASKAKRELGWEAIRGLEE-----MC---ADSWRWQ 330 >gi|57238461|ref|YP_179592.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni RM1221] gi|57167265|gb|AAW36044.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni RM1221] gi|315058893|gb|ADT73222.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni S3] Length = 343 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 30/324 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + +V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRI---LKAKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +ED ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPVVHV-CSSSEVYGRAKVGIKLNEDTTFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDHVRALYL 235 ++ + GP F E + I + G V G+ +VR + D +RA YL Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAIRAYYL 241 Query: 236 V---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---- 286 + +KG++ GE +NI G F++ +++ L+ S+S + I+ +D Sbjct: 242 LSLESQKGKVPCGEAFNIAGEE-------AFKLPEVIEILL--SFSTRKDIKIEQDEERL 292 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 293 RPIDADYQMFDNTKIKSFINWKPE 316 >gi|281357364|ref|ZP_06243853.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC BAA-548] gi|281316395|gb|EFB00420.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC BAA-548] Length = 324 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 153/331 (46%), Gaps = 40/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGG+GFIG L L+ D + +V V+D + G+ +L+ + ++ DI Sbjct: 1 MHYLITGGSGFIGGHLTESLLADGR-RVTVVDNYS-TGSRENLRAVENHPALRIIEDDIV 58 Query: 61 DR-ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E + S ++E D +++ AA V+ + I TN+ GT +L T + Sbjct: 59 THPEILESLIRE--ADVVIHLAAAVGVELVVKDPVRTILTNVHGTENVLRHTAHYHK--- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGH 173 R + ST EVYG + LF+E SP Y+ +K ++ + A+ Sbjct: 114 -------RVIVASTSEVYGKSTQKLFTETDDLIIGSPDHCRWSYACSKLLDEFYLKAFHQ 166 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+P + N GP +IP ++R + G + +YGDG R + +V D +R Sbjct: 167 ASGMPGTVVRFFNTVGPRQTGRYGMVIPRFVSRALNGEPIQVYGDGTQSRCFCHVFDVIR 226 Query: 232 ALYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIP--KSYSHTELIRF 283 AL L++ + GE YNIG + D+ E+ L + L+P K+Y+ + Sbjct: 227 ALKLLIGNEASHGETYNIGSQDSITIGDLAREVIRLTGSSSAIELVPYEKAYA-----KG 281 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 ED +R +++KI + GW P+ ++E Sbjct: 282 FEDM----KRRMPNTAKITALTGWKPELSLE 308 >gi|157370947|ref|YP_001478936.1| NAD-dependent epimerase/dehydratase [Serratia proteamaculans 568] gi|157322711|gb|ABV41808.1| NAD-dependent epimerase/dehydratase [Serratia proteamaculans 568] Length = 336 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ QV+ ID L + L ++ F F++ Sbjct: 1 MKFLVTGAAGFIGFHVAERLLAAGH-QVVGIDNLNDYYDVGLKIARLDLLADKPAFQFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E Q +++ A++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGMAQLFAEHQFQRVIHLGAQAGVRYSLDNPLAYADSNLIGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + L S+ VYG K F +ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 ---HNKVEHL--LYASSSSVYGLNRKLPFATEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--- 232 G+P YGP+ P+ + ++ G + +Y G+ RD+ Y++D A Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGESIDVYNHGEMHRDFTYIDDIAEAIVR 230 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR----- 287 L V+ + G V+ IG + + S E IE R Sbjct: 231 LQAVIPQANASWTVEQGSPATSSAPYHVYNIGNSSPVKLMEYISALEQALGIEARKNMLP 290 Query: 288 --PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG + D+ + EIG+ P+ ++E G+ + V WY Sbjct: 291 MQPGDVLDTSADTVDLYREIGFKPETSVEEGVKRFVEWY 329 >gi|296274096|ref|YP_003656727.1| NAD-dependent epimerase/dehydratase [Arcobacter nitrofigilis DSM 7299] gi|296098270|gb|ADG94220.1| NAD-dependent epimerase/dehydratase [Arcobacter nitrofigilis DSM 7299] Length = 373 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 69/371 (18%) Query: 2 RLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNSL---KEI 46 +++VTG AGFIGS L L +ND Q + +L G ++SL K+I Sbjct: 19 KILVTGTAGFIGSHLAIKLLGRGDEVVGLDNINDYYDQNVKYGRLQRTGIIDSLEDGKKI 78 Query: 47 SQSNL--------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 + + F+++++ D+E + ++ + DA+ N AA++ V S+ ++ Sbjct: 79 PYGKIIISRIDSNYKFIKLNLEDKEAMMQLFEQEKFDAVCNLAAQAGVRYSLTNPAAYMD 138 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY------- 151 +NIIG +LE SC + K+ S+ VYG +E++P+ Sbjct: 139 SNIIGFMNILE------SCRHNNVKN---LSYASSSSVYG------LNEELPFSTNHNVD 183 Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV 211 +P S Y+A+K S++ + + H + I YGP+ P+ + L +EG + Sbjct: 184 HPISLYAASKKSNELMAHTYSHLFDISTTGLRFFTVYGPWGRPDMALFLFTKAALEGKSI 243 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER----------------YNIGGNNERK 255 ++ +G +RD+ YV+D V + V+ + YNIG NN K Sbjct: 244 DVFNNGNMLRDFTYVDDIVEGVIRVIDNPAKANKSWDKKEPSTSSAPYKIYNIGNNNPVK 303 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 +D + I L I K+ + D P YA D + + ++ + P+ +++ Sbjct: 304 LMDFIEAIENKLGKKIEKNMLPIQ----AGDVPA---TYA-DVTDLVEDLNYKPETSIQE 355 Query: 316 GLNKTVCWYLD 326 G+N + WYL+ Sbjct: 356 GINNFIDWYLE 366 >gi|45249999|gb|AAS55712.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Aneurinibacillus thermoaerophilus] Length = 309 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 42/336 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG AGF+G +YL N L Q + + + + N+ ++ + S DI Sbjct: 1 MRALITGVAGFVG----KYLANHLTEQNVEV----FGTSRNNEAKLPNVEMISL---DIM 49 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ + + +PD I + AA+S V S L +TN+ GT +L+ R Sbjct: 50 DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVR-------- 101 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D R L I + E YG + ++ SE+ P SPY +KAS L + YG+ Sbjct: 102 DSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMD 161 Query: 179 VLLSNCSNNYGPYH--------FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 ++ + N+ GP F ++++ + M + + G+ + VRD+ V D V Sbjct: 162 IIHTRTFNHIGPGQSLGFVTQDFAKQIVDI---EMEKQEPIIKVGNLEAVRDFTDVRDIV 218 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH--TELIRFIEDRP 288 +A +L+ + G+ G+ YN+ I I +LD L+ + TEL ++ RP Sbjct: 219 QAYWLLSQYGKTGDVYNVCSG-------IGTRIQDVLDLLLAMANVKIDTEL-NPLQLRP 270 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++K GW P+ +E L + + Y Sbjct: 271 SEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSY 306 >gi|83950108|ref|ZP_00958841.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius nubinhibens ISM] gi|83838007|gb|EAP77303.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius nubinhibens ISM] Length = 347 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 45/337 (13%) Query: 3 LIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGF+GS LC Y+ D + V+ +D L+ G L+++ + F F++ D+ Sbjct: 27 VLITGGAGFLGSQLCDVYIARDYR--VICLDDLS-TGRLSNIGHLLDHPSFEFVEQDV-- 81 Query: 62 RECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ FQP D I N A + + TNI G +L RL Sbjct: 82 -------IEPFQPKGCIDLIFNMACPASPPKYQRDPIHTFKTNIQGAENML---RLA--- 128 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWG 172 K R LQ ST E+YG + SE N P S Y K +++ L + Sbjct: 129 ----HKHGARILQASTSEIYGDPEISPQSESYHGNVNTLGPRSCYDEGKRAAETLFYDFR 184 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ ++ N YGP P +++ +T+++ G + +YGDG R + +V+D + Sbjct: 185 QQYGVDARIARIFNTYGPRMDPGDGRVVSNFVTQVLRGDDITIYGDGSQTRSFCFVDDLI 244 Query: 231 RAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + L L+ G+ N+G E F I L + +I +++ ++ +D P Sbjct: 245 QGLCALIHLPKSPGQPVNLGNPEE-------FTIRELAEIVIEETHKDARIV--YKDLPV 295 Query: 290 HDRRYAIDSSKIKSE-IGWFPQENMESGLNKTVCWYL 325 D R ++ + + W PQ + GL T+ +++ Sbjct: 296 DDPRQRRPDIRLAHQMLNWRPQFTLREGLRSTIPYFM 332 >gi|159901331|ref|YP_001547578.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159894370|gb|ABX07450.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 342 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 36/325 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TG GF+G L RYL + L +L + L + L D+ D Sbjct: 23 RALITGANGFVGQHLVRYL------------QQATTWELWALGREAHPQLPTVL-ADLLD 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + +A+ PD +V+ AA+S + +S + N++G L E + Sbjct: 70 RSAVATAVANAAPDLVVHLAAQSAIPQSFRDPAGTFSINVLGQLHLFE-------AIKSA 122 Query: 122 KKDQFRFLQISTDEVYGSLDK-GLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D L + ++ +YG + GL + E+ P+ PY+ +KA+ D L W +++G+ V Sbjct: 123 QLDPI-VLVVGSNAMYGMAHRSGLPADENTMLCPADPYAVSKAAQDLLAGQWWYSHGLKV 181 Query: 180 LLSNCSNNYGPYHFPEKLIPL---AITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N+ GP + ++P I R+ G V G+ RD+ V D VRA + Sbjct: 182 IRARPFNHTGPGQRADFVVPAFAHQIARIEAGLQPPVIQVGNLTPQRDFSDVRDVVRAYH 241 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELIRFIEDRPGHDRR 293 L+L++ + GE YNIG I +LD LI S + T + RP Sbjct: 242 LLLERAQPGEIYNIGVGQS-------VSIQSILDRLIALSGQTITVEVDPQRLRPVDVPI 294 Query: 294 YAIDSSKIKSEIGWFPQENMESGLN 318 A D+S+++S+IGW PQ ++ L+ Sbjct: 295 VACDASRLRSQIGWEPQYCLDDTLS 319 >gi|320161109|ref|YP_004174333.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] gi|319994962|dbj|BAJ63733.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] Length = 332 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 38/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQV- 57 R++VTG GFI S +LV L IQ V + G++ L+ I + L ++V Sbjct: 10 RVLVTGAGGFIAS----HLVEQLVIQGATVRAFVRYNSRGDIGLLRFIPEQVLRQ-VEVR 64 Query: 58 --DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D + ALK D + + A + S L E + TN++GT +L+ R Sbjct: 65 FGDLRDYNAVVGALK--GTDVVFHLGALIAIPYSYLHPREVVETNVLGTLNVLQACR--- 119 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS---EDMPYNPSSPYSATKASSDYLVLAWG 172 + R + ST EVYG+ GL++ E P + SPY+A+K +D LV ++ Sbjct: 120 ------EIGISRLVHTSTSEVYGT---GLYTPMDEKHPLHAQSPYAASKIGADKLVESFY 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TY + + N +GP +IP I++ + + + G+ RD+ +V D VR Sbjct: 171 CTYDLSAVTVRPFNTFGPRQSARAVIPTIISQALTSERIRI-GNLTTKRDFTFVLDTVRG 229 Query: 233 LYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G GE +N+G E +++ + +L + E RF RP Sbjct: 230 FLLAGSVPGVEGETFNLGTGKEVTVGELIDRVAQILGKEL---IVEQERERF---RPEKS 283 Query: 292 R--RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D SK + +GW P+ + GL +T+ W Sbjct: 284 EVMRLLSDFSKAQMRLGWAPEWTLSKGLKQTLEW 317 >gi|255658862|ref|ZP_05404271.1| UDP-glucose 4-epimerase [Mitsuokella multacida DSM 20544] gi|260849266|gb|EEX69273.1| UDP-glucose 4-epimerase [Mitsuokella multacida DSM 20544] Length = 313 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 30/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L R L+ + + QV V+D + G+ ++L + + +++D+ Sbjct: 1 MNILVTGGAGFIGSHLVRKLLAEGE-QVTVLDNFS-TGSRDNLPQGVKC-----IEMDVN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + E DA+V+ A ++ V S+ N+IG+ +LE+ R Sbjct: 54 D-AALAAVFDEGHFDAVVHLAGQTTVHISMESPALDGEENVIGSIHVLEQAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST YG + + E P +P S Y +K + ++ + + ++G+ Sbjct: 105 -RTKVQRVIFASTAASYGDVAEESLPIVESEPLHPMSFYGLSKVTVEHYLRLYQKSFGLD 163 Query: 179 VLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ +N YG +I + R+ EG + +YGDG+ RD++Y D +Y Sbjct: 164 FVILRFANVYGERQGNGGEGGVISIFAERLAEGKALAIYGDGEQTRDFIYAGDIAAGIYA 223 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L + YN+ E ++V A++ R+ E R G + Sbjct: 224 ALCTEHVNHAYNLSTQTETSLKELV--------AILADVSGKAIEPRYFEARSGDIYKSM 275 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + + +GW P ++ GL +T ++ Sbjct: 276 LANGRARRALGWAPAVSLHEGLRRTYDYF 304 >gi|237740071|ref|ZP_04570552.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium sp. 2_1_31] gi|229422088|gb|EEO37135.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium sp. 2_1_31] Length = 345 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 95/360 (26%), Positives = 161/360 (44%), Gaps = 56/360 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGN---LNSLKEISQSNL---- 51 M +++TGGAGFIGS L + + K +V+V+D Y+ + LN L+ I++ L Sbjct: 1 MNVLITGGAGFIGSHLVEKFLKE-KHRVIVVDNFDSFYSMDIKVLNVLESINKKELKEKI 59 Query: 52 --------------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSIL 91 + DIC+ E ++ + D IVN AA + V SIL Sbjct: 60 LALKDDEKLISLIKYTESDNYKLYVEDICNLENLKEIFIKENIDFIVNLAALAGVRPSIL 119 Query: 92 GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY 151 ++ N+ G +LE + ++ K + +Q S+ VYG+ +F+ED+ Sbjct: 120 RPFDYERVNVKGFLNILE--------ICKELKIN-KLIQASSSSVYGNSKADIFTEDIRV 170 Query: 152 N-PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 + P SPY+ATK + + + H Y I ++ YG P+ I I ++ Sbjct: 171 DFPISPYAATKKAGEEFGNVYSHLYNIDMIQLRFFTVYGERQRPDLAIHKFIEKIENNEE 230 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFL 266 V +YGDG RD+ Y++D V ++ + I E N+G + + K ID++ Sbjct: 231 VTIYGDGNTSRDYTYIKDIVDGIFKSFEYLNNHQNIYEIINLGSSRKIKLIDMI------ 284 Query: 267 LDALIPKSYSHTELIRFIEDRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +I + ++FI+ + G D+ +A ID K K + + E G+ V WY Sbjct: 285 --KIIENKLNKKAKLKFIDKQAGDVDKTFACID--KAKKILNYKVSTKFEDGIENFVNWY 340 >gi|46579771|ref|YP_010579.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|46449186|gb|AAS95838.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|311233562|gb|ADP86416.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris RCH1] Length = 331 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 92/359 (25%), Positives = 162/359 (45%), Gaps = 63/359 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + R LV + + + D L+ G+ S+ ++ ++ D+ DR Sbjct: 10 VLVCGGAGYIGSHMVRALVEHGYVPI-IFDNLS-TGHAESVGDVD------LVRGDLLDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R E DA+++F+A+S V S+ + N++GT LLE R + Sbjct: 62 QALRRLFAEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVGTINLLEAMR---------E 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 R + S+ V+G+ +ED P P +PY +K + + + + YG+ + Sbjct: 113 AGVSRLVFSSSAAVFGNPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYANAYGMRSVSL 172 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ + + G H PE LIP + + G + ++G DG VRD+++V Sbjct: 173 RYFNAAGADEAGDIGESHKPETHLIPNVLRAALGTGPELKIFGDDYDTPDGTCVRDYIHV 232 Query: 227 ED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA---LIPKSYSHT 278 D H+RAL Y+ LK G +N+G N F + +++A + + H+ Sbjct: 233 ADLCDAHLRALSYMQLKPG--AHAFNLGNGNG-------FSVKQVVEAAWRVTGRDVPHS 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW--RPLY 335 R RPG DS+ + E+GW P + +D+ W W +P Y Sbjct: 284 MAPR----RPGDPAWLVADSTLAERELGWKPSFT-------DIDAIIDSAWRWHQKPRY 331 >gi|84622126|ref|YP_449498.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578891|ref|YP_001915820.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366066|dbj|BAE67224.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523343|gb|ACD61288.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 321 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARSE-AVVGLDNYNRYYDPQLKHDRVAALCPGVDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ ++ED V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFIEDIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVNW 312 >gi|209363913|ref|YP_001424277.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] gi|207081846|gb|ABS77822.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] Length = 331 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALCDPRTKIYDIGGDIN 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 68 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H YG Sbjct: 115 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATKIAGEAMATAYHHRYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 172 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 231 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 232 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKNR 285 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 286 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIEW 314 >gi|320107381|ref|YP_004182971.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319925902|gb|ADV82977.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 312 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 143/332 (43%), Gaps = 40/332 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ +V+ +D L+ G L ++ +S+ ++FSF + DIC+ Sbjct: 6 VLVTGGAGFLGSHLCDALLQRGS-RVIAVDNLS-TGRLKNIAHLSKESMFSFEEHDICE- 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 D + N A+ + + E + +GT L+ R + Sbjct: 63 -----PFDYGAVDFVFNMASPASPPGYMKLGVETLRVGSVGTEQTLQIARRY-------- 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q +L ST E YG + +E+ P P S Y K S+ +V+A+ Y + Sbjct: 110 --QAGYLHASTSECYGDPKEHPQTEEYWGNVNPIGPRSVYDEAKRFSEAMVMAYHRYYKV 167 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 L N YGP P+ ++I I + + G + +YGDG R + YV D + + L Sbjct: 168 NTHLVRIFNTYGPRLDPKDGRVISNLIMQALAGEDLTIYGDGSQTRSFCYVSDLIAGI-L 226 Query: 236 VLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + NIG +E +IV E + S S ED P + Sbjct: 227 ALAETSEATPVNIGNPDEFTILSAAEIVKE--------LTGSKSKIGFAPLPEDDP---K 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D SK GW P+ + GL T+ ++ Sbjct: 276 QRQPDISKAGRLFGWKPKVALREGLGLTIPYF 307 >gi|189219879|ref|YP_001940520.1| UDP-glucose 4-epimerase [Methylacidiphilum infernorum V4] gi|189186737|gb|ACD83922.1| UDP-glucose 4-epimerase [Methylacidiphilum infernorum V4] Length = 321 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 49/343 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG+IGS +C ++ +V+V+D L+ G+L ++ + F+Q D+ Sbjct: 1 MKILVTGGAGYIGS-ICVEMLLGRGYRVVVLDNLS-EGHLQAVDPRAL-----FIQGDLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + S +P+A+++FAA++ V S+ + N+ LL+ + Sbjct: 54 DRELLFSVFDSERPEAVIHFAAKALVSESMNSPSLYFRNNVAFGINLLD---------AL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-PV 179 K + R + ST VYG ++K E++P +P +PY +K + ++ + +GI PV Sbjct: 105 VKFEVKRIVFSSTCSVYGCVNKIPIDENVPVHPENPYGESKLLFEKMLEWYRKIHGISPV 164 Query: 180 LL-----SNCSNNYGPYHFPE-KLIP--LAITRMIEGSHVFLYG------DGQNVRDWLY 225 + + + ++G +H E LIP L + +E V +YG DG VRD+++ Sbjct: 165 IFRYFNAAGATASHGEHHRRETHLIPRILHVALGLE-PQVEIYGKDYPTEDGTAVRDYIH 223 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D H++AL L + +N+G + I+ L K S Sbjct: 224 VVDLVDAHIKALELPFEG-----VFNLGNAKGYSVLQII--------ELSRKITSQPIPA 270 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F RPG D SK GW P+ +M S ++ W+ Sbjct: 271 VFAPRRPGDPPILVADFSKALETFGWKPKNDMSSIIHSAWSWH 313 >gi|296284783|ref|ZP_06862781.1| nucleotide sugar epimerase [Citromicrobium bathyomarinum JL354] Length = 349 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 38/344 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQS--NLFSF 54 + ++VTG AGFIG++L LV +V+ ID L YA +L + L ++ + F F Sbjct: 17 VNILVTGAAGFIGASLAEALVARGH-RVIGIDNLNPYYAVSLKRDRLARVAATAGEAFRF 75 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ D D E + AL D IV+ A+ V S+ + +NI G +LE R Sbjct: 76 IECDFGDHEALARALDGHDFDRIVHLGAQPGVRYSLENPRAYAHSNISGHLNMLELGR-- 133 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ + S+ VYG +K F+ ED +P S Y+ATK + + + ++ H Sbjct: 134 -------ERGVDHLVYASSSSVYGGNEKVPFAVEDRVDHPYSLYAATKKADELMSESYAH 186 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + + ++++G + ++ +G+ RD+ YV+D VR + Sbjct: 187 LYRLPQTGLRFFTVYGPWGRPDMMPWIFTQKILKGEPIPVFNNGEMSRDFTYVDDIVRGI 246 Query: 234 YLVL-----------KKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 L G + YNIG N + + ++ +I + Sbjct: 247 VACLDGPPGDDGATKPGGSVAPHALYNIGNNRSEELMRVI--------GIIEAACGRKAQ 298 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I + + G R D I + G+ P+ + + G + V W+ Sbjct: 299 IELLPMQKGDVPRTFADIDAIARDHGFQPETSADEGFPRFVSWF 342 >gi|227825088|ref|ZP_03989920.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] gi|226905587|gb|EEH91505.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] Length = 328 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 56/354 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L+ +V D + G+ ++ E Q +Q D+ Sbjct: 1 MNVLVTGGAGYIGSHVIDDLIKS-GYTPIVYDNFS-TGHAEAVPETVQ-----LIQGDLH 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + +++ DA+++FAA S V S++ ++ N+ GT LL+ R + Sbjct: 54 DFTFLKHIMGQYEIDAVLHFAASSQVGESMVDPGKYYYNNVAGTLGLLDAMR-------E 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F ST VYG D+ +EDMP +P++ Y TK + ++ + YG+ + Sbjct: 107 SGVEYIVFS--STAAVYGEPDQVPITEDMPLHPTNSYGRTKLMIENMLRDYSMAYGLHYV 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ N G H PE LIPL I + + + ++G DG +RD++ Sbjct: 165 ALRYFNAAGASLLGNIGEDHNPETHLIPLTIQAALGKRDAISIFGTDYDTPDGTCLRDYI 224 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +V+D A L L KG YN+G G + R+ I+ V E+ Sbjct: 225 HVKDLASAHILALNHLVKGGASRVYNLGTKTGLSVREIINAVKEV-----------TGRD 273 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +++ + R G R S KI E+ W P+ + +V ++ W W Sbjct: 274 FMVKEEKRRAGDPARLIASSEKIAKELHWKPE-------HSSVKEIVETAWRWH 320 >gi|165918908|ref|ZP_02218994.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] gi|165917378|gb|EDR35982.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] Length = 330 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 7 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 67 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ H YG Sbjct: 114 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATKIAGEAMATAYHHRYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 171 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 230 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 231 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT------FVKNR 284 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 285 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIEW 313 >gi|110598632|ref|ZP_01386898.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [Chlorobium ferrooxidans DSM 13031] gi|110339744|gb|EAT58253.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [Chlorobium ferrooxidans DSM 13031] Length = 337 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+++VTG AGFIG +C+ L+ + +V ID + ++ SLKE S L F F+ Sbjct: 1 MKILVTGAAGFIGFHVCKQLLERGE-EVTGIDNMNDYYDV-SLKEARLSMLLPYAGFRFV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI DR + + + + +VN AA++ V S++ +I +NI+G +LE Sbjct: 59 RMDIADRSAMEELFRTGEFEKVVNLAAQAGVRYSLINPHAYIESNIVGFTNILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C K + S+ VYG+ + FS D +P S Y+A+K +++ + + H Sbjct: 113 GCRHNGVK---HLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + L ++ + ++ G++ RD+ +V+D + Sbjct: 170 YNLPTTGLRFFTVYGPWGRPDMALFLFTDAIVNNKPIKVFNFGKHRRDFTFVDDITEGII 229 Query: 235 LVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L R R YNIG ++ +D++ I + D L Sbjct: 230 RTLDHTAEPNPEWSGLKPDPGTSRAPWRVYNIGNSSP---VDLMDYIKAIEDQL-----G 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T ++ +PG D ++ ++ + P+ ++ G+ + V WY Sbjct: 282 RTAEKEYLPLQPGDVPDTYADVDQLMQDVNYKPETTVQEGIKRFVAWY 329 >gi|90414929|ref|ZP_01222893.1| putative nucleotide sugar epimerase [Photobacterium profundum 3TCK] gi|90323985|gb|EAS40581.1| putative nucleotide sugar epimerase [Photobacterium profundum 3TCK] Length = 334 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGSA+ L +V+ ID L Y +L + + ++ + F+F+++ Sbjct: 1 MKYLVTGAAGFIGSAVSERLCAQGH-EVIGIDNLNDYYDVSLKHARLDRAEHDKFTFVEL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ + + E Q D +++ AA++ V SI + +N++G +LE C Sbjct: 60 DLADRDGMAALFAEQQFDRVIHLAAQAGVRYSIDNPMAYADSNLVGHLAILE------GC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSSPYSATKASSDYLVLA 170 K + S+ VYG ++ MP+N P S Y+ATK S++ + Sbjct: 114 RHNKVK---HLVYASSSSVYG------LNQKMPFNTSDSVDHPISLYAATKKSNELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y +P YGP+ P+ + +++G + +Y +G RD+ Y++D V Sbjct: 165 YSHLYDVPTTGLRFFTVYGPWGRPDMALFKFTKAIVDGEQIDVYNNGDMRRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + ++ G YNIG + K +D I L DAL Sbjct: 225 EGVMRIQDVIPQKNPDWTVEAGSPATSSAPYKVYNIGHGSPVKLMDY---IEALEDALGI 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + F+ +PG D+ + I + P ++ G+ V WY Sbjct: 282 EAKKN-----FMPMQPGDVYATYADTEDLFKAINYQPAVKVKEGVKAFVDWY 328 >gi|170758224|ref|YP_001787997.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169405213|gb|ACA53624.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 305 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L++ + V +ID L+ GN+N++ + ++ + L +I Sbjct: 1 MKILVTGGAGFIGSNLVDKLIS-MGNDVCIIDNLS-TGNINNINKKARLYINDILDSNIS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 59 N------IFKKEKFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ +YG + E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAIYGQPEYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ +++A+ K SH E + E R G + + Sbjct: 224 CNGS-RNLFNIGTGVYTTVKDLA---QMMINAM--KVQSHIE---YKEARKGDIEKSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ +++ GL KT+ +Y +N Sbjct: 275 IEKAKVELKWEPKYSLQKGLIKTINYYKNN 304 >gi|39937041|ref|NP_949317.1| nucleotide sugar epimerase [Rhodopseudomonas palustris CGA009] gi|39650898|emb|CAE29421.1| nucleotide sugar epimerase [Rhodopseudomonas palustris CGA009] Length = 348 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 33/339 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG + R L+ + V+ +D L Y L L ++ FSF+ D Sbjct: 24 VLVTGAAGFIGYHVARELLEAGNV-VVGLDSLNDYYDPALKQARLDLLTPYPGFSFVHAD 82 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR I + + +++ AA++ V S+ ++ +N+ G +LE R Sbjct: 83 LSDRPAIADLFAKHRFPVVIHLAAQAGVRHSLSHPHDYADSNLEGFLNVLEGCR------ 136 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ K FS D P + P S Y+ATK +++ + + H Y + Sbjct: 137 ---HNGCSHLIYASSSSVYGANTKLPFSVDDPTDHPISLYAATKKANELMAHCYSHLYRL 193 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP++ P+ + L + EG + L+ G+ RD+ +V+D R + ++ Sbjct: 194 PTTGLRFFTIYGPWYRPDMALYLFARAITEGRPIKLFNHGKMRRDFTFVDDVTRVVTKLM 253 Query: 238 K----------KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 G YN+G ++ + + +V AL+ + + + + Sbjct: 254 TLVPTAEPGQNGGAPARVYNVGNHSPEELMHVV--------ALLERELGRPAIKEMLPMQ 305 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG D + ++G+ P +E G+ V W+ D Sbjct: 306 PGDVPETFADVEALFRDVGFRPSTPIEDGVRAFVRWFRD 344 >gi|114330252|ref|YP_746474.1| NAD-dependent epimerase/dehydratase [Nitrosomonas eutropha C91] gi|114307266|gb|ABI58509.1| NAD-dependent epimerase/dehydratase [Nitrosomonas eutropha C91] Length = 335 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 149/346 (43%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 M++++TG AGFIGSAL L+ + + + Y + L + ++ L++ Sbjct: 1 MKILITGSAGFIGSALTLRLLERGDTVIGIDNHNDYYDPQIKEDRLARFADHPAYTHLRL 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE I S + +P +VN AA++ V SI +I +NI+G +LE R Sbjct: 61 DLADREGINSCFEMHKPQRVVNLAAQAGVRYSIENPLAYIDSNIVGFAHILEGCR----- 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ + FS + P S Y+A+K S++ + + H Y Sbjct: 116 ----HNGVEHLVYASSSSVYGANTQMPFSVHHNVDHPLSLYAASKKSNELMAHTYSHLYN 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + YGP+ P+ + ++ G + ++ G++ RD+ YV+D V + V Sbjct: 172 LSTAGLRFFTVYGPWGRPDMALFKFTKAILAGEKIPVFNYGKHRRDFTYVDDIVEGVIRV 231 Query: 237 LKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L + GE YNIG N+ + +D + A + K+ Sbjct: 232 LDQPTRPDPAWSGENPDAGTSMAPWRVYNIGNNSPVELMDYI--------AALEKALGKK 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D S + + + P ++E G+ V WY Sbjct: 284 AAMEMLPLQPGDVPDTYADVSDLVEQFDYRPATSVEQGIASFVTWY 329 >gi|226326263|ref|ZP_03801781.1| hypothetical protein PROPEN_00106 [Proteus penneri ATCC 35198] gi|225205341|gb|EEG87695.1| hypothetical protein PROPEN_00106 [Proteus penneri ATCC 35198] Length = 335 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 146/348 (41%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + + L+ ++ V+ ID L Y L L ++ Q F F + Sbjct: 1 MKILVTGAAGFIGYHMSQRLI-EMGYHVVGIDNLNDYYDVRLKEARLAKLQQLEKFHFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D + Q D +++ AA+ V SI +I NI+G +LE R Sbjct: 60 LDIVDSVKVAQLFASHQFDRVIHLAAQPGVRYSIENPMAYIDANIVGHINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG K FS ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HNKVGHLIYSSSSSVYGLNQKQPFSTEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y G RD+ YV+D V ++ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAMLAGEPIDVYNGGNMTRDFTYVDDIVGSVVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++KG YN+G K + + I KS + Sbjct: 231 LVNVIPEADENWTVEKGETSSSSAPYKIYNVGNGQPTKLMAFI--------EAIEKSLNI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + + G D + IG+ P +E G+ + V WYL Sbjct: 283 KAKLNLMPMQDGDVLSTCADCQDLSETIGFSPNTEVEYGVKQFVDWYL 330 >gi|126178650|ref|YP_001046615.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125861444|gb|ABN56633.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 309 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 33/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR IVTGGAGFIGS L L D +V++ID L G+ +++ + +F++ I Sbjct: 1 MRYIVTGGAGFIGSNLTATLARDH--EVVIIDNLA-TGHQENIEHLLGHPRVTFVEGSIT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSC 117 D + + D + + AA V RS+ L ++E N+ GT +L + C Sbjct: 58 DLDLLAETFP--GADGVFHQAAIPSVPRSVKDPLASNE---ANVTGTLDVLVAAK---DC 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S+ VYG E M NP SPY+ TK + + + YGI Sbjct: 110 GVPAVV------AASSSSVYGDTPALPKHEGMVPNPLSPYAVTKLADECYGKVFSDLYGI 163 Query: 178 PVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP P+ +IP ITR++ G +YGDG+ RD+ +V D V+A Sbjct: 164 RTVSLRYFNVFGPRQDPKSEYAAVIPKFITRLLAGEPPVIYGDGEQTRDFTFVADVVQAN 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G +NI G + L L+ + + + I + R G R Sbjct: 224 IRAMESDARGV-FNIAGGRR-------ISLNQLASILMEITGTRCDPI-YEAPRAGDIRD 274 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + G+ PQ ++E GL + V W+ Sbjct: 275 SLADISRARKAFGYDPQYSVEEGLFQAVAWF 305 >gi|262037701|ref|ZP_06011143.1| putative UDP-glucose 4-epimerase [Leptotrichia goodfellowii F0264] gi|261748173|gb|EEY35570.1| putative UDP-glucose 4-epimerase [Leptotrichia goodfellowii F0264] Length = 310 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 32/323 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS + + +++++D L N IS F +VD+ D Sbjct: 4 KILITGGAGFIGSHIAERF-DKENYEIIIVDNLVGGKKEN----ISHLKNIRFYEVDVRD 58 Query: 62 RECIRSALKEFQPDAIVNF----AAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 RE + K F+ + +N+ AA+ V S+ N++G +L+ R + Sbjct: 59 RESLE---KVFEKNKEINYVFHEAAQVSVSVSVENPHYDADENVLGLINVLDMCRKY--- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S +K L ST YG + +ED P +PY TK ++ + + +G+ Sbjct: 113 -SVEK-----VLFASTAAAYGIPKTSVSAEDSKIAPLAPYGLTKVFGEHYIRMYHDLFGL 166 Query: 178 PVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 ++ +N YGP H ++ + RM +F+ GDG+ RD++YV D A Y Sbjct: 167 NYVIFRYANVYGPRQSAHGEAGVVSIFNDRMKVEQEIFIDGDGEQTRDFIYVRDIAEANY 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + + I + N+ N + +I+ +F + K + + + E R G R Sbjct: 227 VCAVESVINKTLNV-STNAKTSINELFN-------YMKKYSGYKKEANYREPRKGDIRDS 278 Query: 295 AIDSSKIKSEIGWFPQENMESGL 317 +D++K+KS W + ++E GL Sbjct: 279 RLDNTKLKSNTSWNYKYSLEKGL 301 >gi|170784981|pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase gi|170784982|pdb|2PK3|B Chain B, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 152/336 (45%), Gaps = 42/336 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG AGF+G +YL N L Q + + + + N+ ++ + S DI Sbjct: 13 MRALITGVAGFVG----KYLANHLTEQNVEV----FGTSRNNEAKLPNVEMISL---DIM 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++ + + +PD I + AA+S V S L +TN+ GT +L+ R Sbjct: 62 DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVR-------- 113 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D R L I + E YG + ++ SE+ P SPY +KAS L + YG+ Sbjct: 114 DSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMD 173 Query: 179 VLLSNCSNNYGPYH--------FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 ++ + N+ GP F ++++ + + + + G+ + VRD+ V D V Sbjct: 174 IIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQ---EPIIKVGNLEAVRDFTDVRDIV 230 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH--TELIRFIEDRP 288 +A +L+ + G+ G+ YN+ I I +LD L+ + TEL ++ RP Sbjct: 231 QAYWLLSQYGKTGDVYNVCSG-------IGTRIQDVLDLLLAMANVKIDTEL-NPLQLRP 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++K GW P+ +E L + + Y Sbjct: 283 SEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSY 318 >gi|121611760|ref|YP_999567.1| NAD-dependent epimerase/dehydratase [Verminephrobacter eiseniae EF01-2] gi|121556400|gb|ABM60549.1| NAD-dependent epimerase/dehydratase [Verminephrobacter eiseniae EF01-2] Length = 336 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 27/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TG GFIGS L LV +++ + + + + G L++L +++ + + D+ Sbjct: 7 ILITGAEGFIGSHLVEALVAQGRRVRAMALYNSFGHYGWLDTLAPATRARI-DLVMGDVR 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R A++ DA+++ AA + S ++ TN+ GT +L+ R Sbjct: 66 DAASVRQAMQGC--DAVMHLAALVAIPYSYTAPSSYVDTNVTGTLHVLQAAR-------- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + ST EVYGS E P SPY+A+K +D + ++ +G PV Sbjct: 116 -DLELRKVVHTSTSEVYGSAQIIPIPETHPLLAQSPYAASKIGADQMAYSYYCAFGTPVA 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP ++P + + + + G RD+ +V D V L +L Sbjct: 175 TARPFNTYGPRQSLRAVLPCIMLQALSAAPRLRLGALAPTRDFNFVTDTVAGLIAILDSD 234 Query: 241 R-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 + +GE ++G +E D V + + + L RP R D Sbjct: 235 KAVGETIHLGSGHEISIGDAVRLVAEITGKPLEIEAEPARL------RPAASEVGRLVCD 288 Query: 298 SSKIKSEIGW----FPQENMESGLNKTVCWYLDNN 328 +K + +GW +E ++ GL +++ W+ + + Sbjct: 289 PAKACALLGWQSSLAGREGLKEGLTRSLEWFANPD 323 >gi|304438578|ref|ZP_07398517.1| NAD-dependent epimerase/dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368416|gb|EFM22102.1| NAD-dependent epimerase/dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 324 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 31/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS L +++ + +V V+D L Y N+ ++ + F F+Q DI Sbjct: 14 FLVTGGAGFIGSNLAEAILS-MGHRVRVLDNLLTGYEKNIAGFRDNPK---FEFIQGDIR 69 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D A + D +++ AAE V SI + TNIIGT ++E + Sbjct: 70 DAATCNRACEGV--DYVLHQAAEVSVPESIEQPVSYTMTNIIGTVNVME---------AA 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + S+ VYG + E++ S Y+ TK + + YG+ Sbjct: 119 AKHGVKKMTYASSAAVYGDDETMPKREEIVGRRLSTYAVTKFVDEEYAYQYTLNYGLDCY 178 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--LY 234 N YG P +IP I ++ + GDG+ RD++YVED V+A L Sbjct: 179 GMRYFNVYGRRQDPNGAYAAVIPKFIECLLRDEPPTINGDGEQSRDFVYVEDVVQANLLA 238 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V GE YN+ +R +++ ++ A++ K + F +R G R Sbjct: 239 CVAPHEAAGEAYNVAAG-KRSSLNEMY-------AVLRKLFGKDLKPVFGLERKGDIRHS 290 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SKIK +G+ P+ + G+ + + WY +N Sbjct: 291 GADISKIKKNLGYAPKYDFSRGITEAIQWYKEN 323 >gi|73668677|ref|YP_304692.1| dTDP-glucose 4,6-dehydratase [Methanosarcina barkeri str. Fusaro] gi|72395839|gb|AAZ70112.1| dTDP-glucose 4,6-dehydratase [Methanosarcina barkeri str. Fusaro] Length = 298 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 35/323 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + Y + V ++D L L+ I Q F++ DIC Sbjct: 1 MKVLVTGGAGFIGSHIAEYFA-EAGHTVRILDNLA----TGFLRNIPQYKNVEFIKGDIC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A D + + AA V S E N +GT +L+ +C+ Sbjct: 56 DFPLVEKA--ALGMDYVFHEAALVSVPLSCEKPSEAFQINTLGTLNVLQ------ACVKA 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ S+ +YG+ E M P+SPY+ +K +YL + +G+ Sbjct: 108 GVK---KFVTASSAAIYGNNPVLPKRESMYPEPASPYAISKLDGEYLARMFYENHGLRTT 164 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P+ +IP+ + R G + +YGDG RD+++V+D VRA Sbjct: 165 CLRYFNVYGPRQDPKSPYAAVIPIFLERAKLGKDLVIYGDGLQSRDFVHVKDVVRANVAA 224 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G G+ +N+ ++ I L D+ + I R G R Sbjct: 225 LEHGD-GQVFNVAMGKSVTVRELAENINKLTDS--------SSRIIHAASRAGDVRDSKA 275 Query: 297 DSSKI----KSEIGWFPQENMES 315 D SKI K EI QE ++S Sbjct: 276 DVSKISDWWKGEIEL--QEGLKS 296 >gi|289595826|ref|YP_003482522.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] gi|289533613|gb|ADD07960.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] Length = 317 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 28/332 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + + +VLV D L+ +G + +KE F F+Q D+ Sbjct: 1 MKIMVTGGAGFIGSHIVDALMEE-EHEVLVYDNLS-SGKMEFIKEHMGKENFKFVQADLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ ++ + + + AA V + N+I T+ +LE RL Sbjct: 59 DFEKLKEEMEGVE--LVYHVAANPDVRLGASDTHVHLEQNVIATYNVLEAMRL------N 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D KD + ST VYG ++ E P P S Y A+K ++ + ++ HT+G+ Sbjct: 111 DVKD---IIFTSTSTVYGEANEIPTPEGYGPLIPISLYGASKLGAEAFITSYAHTFGMSA 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLK 238 ++ +N GP +I I ++ H + GDG + +LYV+D V A+ K Sbjct: 168 VIYRFANIVGP-RSTHGVIYDFIMKLKRNMHELEILGDGTQTKSYLYVKDCVDAIIFGYK 226 Query: 239 -KGRIGERYNIGGN---NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + R E +NIG N RK DI+ E L D Y T R G + Sbjct: 227 NRKRDVEIFNIGSEDWINVRKIADIIVEEMGLQDV----KYKFTGGKR---GWKGDVPKM 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + KIKS GW P+ N E + T L+ Sbjct: 280 LLSIEKIKS-YGWKPKYNSEESVRLTARHLLN 310 >gi|159037719|ref|YP_001536972.1| NAD-dependent epimerase/dehydratase [Salinispora arenicola CNS-205] gi|157916554|gb|ABV97981.1| NAD-dependent epimerase/dehydratase [Salinispora arenicola CNS-205] Length = 329 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/339 (26%), Positives = 142/339 (41%), Gaps = 33/339 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GFIGS L LV D +T+ G S E + D+ D Sbjct: 5 RVVVTGGCGFIGSHLVDQLVRRGD------DVVTFDGVAPSTGERRPGTTARHIVGDVRD 58 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + A+ QP D + + AA VD+ + + I N+ GT +LE Sbjct: 59 PSGLAQAI---QPGVDVVYHMAAVVGVDQYLARPLDVIDINLNGTRNVLELA-------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSED--MPYNPSSP----YSATKASSDYLVLAWGH 173 + R + ST EV+G + ED P++ YS++KA +++L A+ Sbjct: 108 --ARAGARVIVASTSEVFGKNPAVPWKEDGDRVLGPTTADRWAYSSSKALAEHLTFAFAR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP P ++ +I R + G +Y G+ R + YV D V Sbjct: 166 QHSLAATVVRYFNVYGPRQRPAYVVSRSIHRALNGLAPVVYDQGRQSRCFTYVADAVDGT 225 Query: 234 YLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY-SHTELIRFIEDRPGHD 291 L +GE +N+G E ++V + L S + L +D P Sbjct: 226 MLAAAAPSAVGEAFNLGSMRESMISEVVELVAKLAGGTSTTSVDTAARLGAAYQDLP--- 282 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R D++K ++ +GW +E GL +T+ W N WW Sbjct: 283 -RRVPDNTKARTTLGWDCATLLEDGLARTIEWARANAWW 320 >gi|317154957|ref|YP_004123005.1| CDP-glucose 4,6-dehydratase [Desulfovibrio aespoeensis Aspo-2] gi|316945208|gb|ADU64259.1| CDP-glucose 4,6-dehydratase [Desulfovibrio aespoeensis Aspo-2] Length = 351 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 39/340 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL------ 55 R+ +TG +GF GS L +L +L + Y SL S N+F + Sbjct: 10 RVFMTGHSGFKGSWLALWLT------LLGAEVHGY-----SLDPPSVPNMFELIGLRHDL 58 Query: 56 ---QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI D E +R A+ F PD +++ AA+ V RS E TTN+IGT ++E R Sbjct: 59 ASTHADIRDFEALRRAMGVFSPDLVIHMAAQPLVRRSYAEPVETFTTNVIGTVNVMEAVR 118 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAW 171 S + + +++D+ Y +L G+ F E P PYSA+K ++ +W Sbjct: 119 HTESVRA--------VVNVTSDKSYLNLGTGVAFRESDPMGGDDPYSASKGCAELAAQSW 170 Query: 172 GHTY---GIPVLLS-NCSNNYGPYHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 ++ P L+S N G F + +L+P + G V + + VR W +V Sbjct: 171 NASFFQNAGPSLVSVRAGNVVGGGDFGQDRLLPDMVRAFSRGEPVRIRSP-KAVRPWQFV 229 Query: 227 EDHVRALYLVLKKGRI-GERYNIGG-NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + + YLVL K + G R +GG N +N D +G ++ + + + Sbjct: 230 LEPLSG-YLVLAKALLEGRREFVGGWNFGPRNADAQ-TVGQVVTGFVERWGDGAQCAMDA 287 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D P +D +K ++GW P+ ++ L+ +V WY Sbjct: 288 GDHPHEAATLRLDCTKAAEQLGWIPRTDVNMALDWSVEWY 327 >gi|327399547|ref|YP_004340416.1| UDP-glucuronate 4-epimerase [Hippea maritima DSM 10411] gi|327182176|gb|AEA34357.1| UDP-glucuronate 4-epimerase [Hippea maritima DSM 10411] Length = 350 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 64/366 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK--------LTYAGNLNSLKEI------ 46 M++++TG AGFIG L L D +++ ID L YA LKE Sbjct: 1 MKILITGTAGFIGFHLANKLAKD-GFEIVGIDNINDYYDVGLKYA----RLKESGIEEAK 55 Query: 47 ---------SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 S+ N ++F+++D+ D+E + + K+F DA+ N AA++ V S+ +I Sbjct: 56 IEYSRPVRSSKYNNYTFVRLDLKDKEGVDALFKDFGFDAVCNLAAQAGVRYSLKNPYSYI 115 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSP 156 +NI G +LE R + + F S+ VYG K FSE + P S Sbjct: 116 DSNIYGFLNILEACRHFGV-------ENLSFA--SSSSVYGLNKKQPFSEKHNVDHPISL 166 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 Y+ATK S++ + + + YG+ + YGP+ P+ + + ++E + +Y Sbjct: 167 YAATKKSNELMAHTYSYLYGLRITGLRFFTVYGPWGRPDMALFRFVKNILEDKPIDVYNY 226 Query: 217 GQNVRDWLYVEDHVRALYLVLK-----------------KGRIGER-YNIGGNNERKNID 258 G+ RD+ Y++D V + V+K ++ R YNI GNN ++D Sbjct: 227 GKMERDFTYIDDIVEGIVRVIKNPAKPNEEWNALNPDPSSSKVAYRIYNI-GNNSPVSLD 285 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 + +I I K + +PG D S + E+ + P E G+ Sbjct: 286 MFIKI-------IEKELGRRAKKNLLPMQPGDVESTYADVSALIEELNYKPHTPPEIGIK 338 Query: 319 KTVCWY 324 + WY Sbjct: 339 NFIEWY 344 >gi|257055179|ref|YP_003133011.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora viridis DSM 43017] gi|256585051|gb|ACU96184.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora viridis DSM 43017] Length = 329 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 38/333 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS +C+ L+ +V +D L G++ ++ + F F+++D+ Sbjct: 10 VLVVGGAGFIGSHVCQRLLRSGH-RVTCVDSL-VTGSVTNVASLLDDARFRFVELDVT-- 65 Query: 63 ECIRSALKEF----QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 L + PD+++N A+ + E + T GT LE Sbjct: 66 ----LPLPRWPDLGTPDSVLNLASPASPKDYQRLPIETLRTGSRGTEHTLELA------- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 + RF+ ST EVYG + E P P S Y K ++ L +A+ Sbjct: 115 ---VRHGARFVLTSTSEVYGDPLEHPQRETYWGNVNPIGPRSVYDEAKRYAEALTMAYHR 171 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G V ++ N YGP + ++IP IT+ + G+ + + G G R YV+D V Sbjct: 172 ELGADVAIARVFNTYGPRMRTDDGRMIPNFITQALSGAPLTVAGSGTQTRSVCYVDDTVT 231 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + + G G NIG +E + EI I ++ S I D P Sbjct: 232 GLLALWRSGLTGP-VNIGNPHELTVGQVAEEI-----RRITRTTSPVISIPGAVDDP--- 282 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D + ++++GW P+ + GL +T+ W+ Sbjct: 283 RRRCPDITVARTQLGWSPEVGLHEGLRRTIAWF 315 >gi|229170153|ref|ZP_04297841.1| UDP-glucose 4-epimerase [Bacillus cereus AH621] gi|228613330|gb|EEK70467.1| UDP-glucose 4-epimerase [Bacillus cereus AH621] Length = 338 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ + +++V+D L+ + ++N + EI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLKN-GYEIIVVDNLSNSSVESINRVTEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 ILNREALDTIFEENTIEAVIHFAGFKAVGESVEIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K D + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHDVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SITLLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLGTTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MCA---DSWRWQ 328 >gi|322418953|ref|YP_004198176.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] gi|320125340|gb|ADW12900.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] Length = 343 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 149/336 (44%), Gaps = 29/336 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNL---FSFLQVD 58 +VTG AGFIGS L L+ L +V+ +D NL L+ + F+F++ D Sbjct: 20 LVTGAAGFIGSNLVEALLR-LDQKVVGLDNFATGKRQNLEELRSLCPPRKWENFAFIEGD 78 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + + A D +++ A V RS+ N+ G +L R Sbjct: 79 LRDLDTCQKAASGI--DYVLHQGALGSVPRSLADPVTSNAANVTGFLNMLVAAR------ 130 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ++ YG ED P SPY+ TK ++ + +YGI Sbjct: 131 ---DAGVKRFVYAASSSTYGDHPDLPKVEDRIGRPLSPYAVTKYVNELYADVFARSYGIE 187 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +G P+ +IP + M+ VF+ GDG+ RD+ +V++ V+A Sbjct: 188 SIGLRYFNVFGRRQDPDGAYAAVIPKWVASMLRREQVFINGDGETSRDFCHVQNVVQANL 247 Query: 235 LVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G G + YN+ ER +++ +F++ + D L P++ S T R E R G Sbjct: 248 LSATTGNPGAVNQVYNV-AVGERTSLNQLFQL--IRDFLQPEAASLTPAYR--EFRAGDV 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D SK + +G+ P ++ GL + + WY +N Sbjct: 303 RHSLADISKAERLLGYQPTHRIKEGLGEAMQWYREN 338 >gi|297526866|ref|YP_003668890.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255782|gb|ADI31991.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 319 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 147/323 (45%), Gaps = 32/323 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS L L+ + I V V+D + +G ++L + L+ D+ D Sbjct: 8 RALVTGGAGFIGSHLVDRLLKNGWI-VRVVDNFS-SGRYSNLAHHKGDSRLEILRGDLKD 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E A+ D + ++AA V S D N++ TF LLE R Sbjct: 66 AETCMRAVDGV--DVVFHYAANPEVRVSTTNPDIHFNENVVATFNLLEAMR--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 KKD R + S+ VYG ++ E P P S Y A+KA+ + L+ A+ YGI ++ Sbjct: 115 KKDVRRLVFASSSSVYGEPEEIPVDEGAPIRPVSVYGASKAACEALIHAYSRLYGIKSVV 174 Query: 182 SNCSNNYGP-------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N GP Y +KL RM + + GDG VR ++Y+ D + A Sbjct: 175 LRYANVVGPRLRHGVIYDIIQKL------RM-NPRRLEVLGDGTQVRSYIYIADAIEATM 227 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L K + YN+ GN + +D V I + L H + + PG +R Sbjct: 228 LAFKNANDYFKVYNV-GNEDWITVDEVVNIIIEVIELNNVEIVHKPIAHGV-GWPGDVKR 285 Query: 294 YAIDSSKIKSEIGWFPQ-ENMES 315 A+ K+K +G+ P+ +++ES Sbjct: 286 IALSIEKLK-RLGFKPKMDSIES 307 >gi|86358846|ref|YP_470738.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CFN 42] gi|86282948|gb|ABC92011.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CFN 42] Length = 338 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV- 57 MR +TG AGFIG L R L+ + +V D LT Y L ++ + S +F V Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-EVTGFDGLTPYYNVKLKEMRHAALSQFPAFRPVI 59 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + +A+ PD +++ AA++ V S+ + +I +N+ G+ W+ Sbjct: 60 SMLEDRPALEAAVSAAAPDILIHLAAQAGVRYSLENPEAYIHSNVEGS----------WN 109 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 110 IMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGP+ P+ + M+EG + +YG+G RD+ Y++D + A+ Sbjct: 170 HKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLIEAIV 229 Query: 235 LV-----LKKGRIGER-------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ R+G+ NIGG +D V + K+ Sbjct: 230 RLSAIAPSEENRLGDAGIETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKALG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R + + G+ P ++ G+ V WY+D Sbjct: 282 RRAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVEAFVDWYID 331 >gi|84488888|ref|YP_447120.1| nucleoside-diphosphate-sugar epimerase [Methanosphaera stadtmanae DSM 3091] gi|84372207|gb|ABC56477.1| predicted nucleoside-diphosphate-sugar epimerase [Methanosphaera stadtmanae DSM 3091] Length = 331 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 152/335 (45%), Gaps = 32/335 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG +GS L + L +++++D L+ A N I + + F++ DICD Sbjct: 12 ILVTGGAGCVGSNLTKKLAQFNPKKIIILDNLSSAYTWN----IPKDDSIEFIEGDICDD 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ K+ +PD + + AA S+ + + N +G +LE +L Sbjct: 68 QVLKWVFKQ-KPDFVFHLAAHFANQNSVDKPELDLKVNGLGILKVLEYAQL--------- 117 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VYG K F E D+ + +PY TK + + + Y +P+ Sbjct: 118 TGVERFVYSSSGCGVYGLDSKMPFEEHDISISLHTPYQVTKLLGELYTNYFHNLYDLPIA 177 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LV 236 + N +GP P K +IP + + + + G+G RDW YV+D ++ L L Sbjct: 178 NARFFNVFGPGEVPGKYRNVIPNFMYWAMNKQALPITGNGSETRDWTYVDDIIQGLTRLG 237 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + IGE N+G + + ID+ ++ L D Y ++R D + + Sbjct: 238 VVDKAIGESINLGSGKDHRVIDMANKVNELCDNEAGIEY---------KERRDWDAKNKL 288 Query: 297 DSS--KIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 SS K K + + P E GL T W++ NNW Sbjct: 289 LSSIDKAKKILKYNPVHTFEEGLENTHEWFV-NNW 322 >gi|21233276|ref|NP_639193.1| nucleotide sugar epimerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770234|ref|YP_244996.1| nucleotide sugar epimerase [Xanthomonas campestris pv. campestris str. 8004] gi|21115113|gb|AAM43084.1| nucleotide sugar epimerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575566|gb|AAY50976.1| nucleotide sugar epimerase [Xanthomonas campestris pv. campestris str. 8004] Length = 321 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGE-NVVGLDNYNSYYDPQLKHDRVAALCPQIDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDREGLAALFDEIQPTRVVHLAAQAGVRYSLENPHAYVDSNLVGFVNVLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVADIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSTEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+S+ ++ G+ P +E GL + V W Sbjct: 282 RTMADTSRAQAAFGFDPATPVELGLPQVVEW 312 >gi|305680991|ref|ZP_07403798.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266] gi|305659196|gb|EFM48696.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266] Length = 342 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + + ++D + GN +++ + + ++ DI Sbjct: 14 MKLLVTGGAGYVGS-VCATVLLEQGHDITIVDNFS-TGNRDAVPANA-----TLIEGDI- 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ L D +V+FAA S V S+ +++ N + T LL+ R Sbjct: 66 -RDVAGDVLAGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMR-------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG D+ +EDMP P++PY A+K + DY + ++ H +G+ Sbjct: 117 -NHGVTNLVFSSTAATYGEPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGAT 175 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + +F++G DG +RD++++ Sbjct: 176 SLRYFNVAGAYGSVGENREVETHLIPLVLQVALGHRDEIFIFGDDYPTKDGTCIRDYIHI 235 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +D A L L+ G +N+G G + ++ ID E+ H + Sbjct: 236 KDLADAHVLALESNTPGTHRIFNLGSGDGYSVKEVIDKCREV-----------TGHPIPV 284 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + R G S++ K+E+GW P Sbjct: 285 TMADRRAGDPAVLIASSARAKAELGWRPSRT 315 >gi|162455659|ref|YP_001618026.1| NDP-sugar oxidoreductase [Sorangium cellulosum 'So ce 56'] gi|161166241|emb|CAN97546.1| NDP-sugar oxidoreductase [Sorangium cellulosum 'So ce 56'] Length = 319 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 45/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 MR +VTG AGFIGS L L+ +L +VL +D+ T YA L +L + FS Sbjct: 1 MRCLVTGVAGFIGSHLAERLI-ELGHEVLGVDRFTDYYARELKEGNLARLRGEPRFSLST 59 Query: 57 VDICDRECIRSALKEFQP-----DAIVNFAAESHVDRSILGADE-FITTNIIGTFILLEE 110 D+ A + +P + + + AA++ V S + E ++ N++ T LLE Sbjct: 60 ADL--------ATDDLRPLLSGREVVFHQAAQAGVRPSWGQSFEVYLRDNVLATQRLLEA 111 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASS 164 R + + S+ VYG D + D+P + P SPY TK ++ Sbjct: 112 ARAHGHVR--------KLVYASSSSVYG--DPSGNTGDVPMHESSRTVPHSPYGVTKLAA 161 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 + L + +G+P + YGP P+ I +++G V +YGDG+ RD+ Sbjct: 162 EQLCELYRRNFGLPTISLRYFTVYGPRQRPDMAFHRFIAAVLKGEPVRVYGDGEQTRDFT 221 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 YV D V+A ++ G +G +NIGG + + + +G L + P Sbjct: 222 YVSDAVQANVDAMESGAVGV-FNIGGGS---RVSLNDALGLLGELAGPVRVERG------ 271 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 E +PG RR D++ ++ + + P+ + GL V W Sbjct: 272 EPQPGDVRRTWADTAAARAALRYVPRVPLREGLAAQVAW 310 >gi|78187259|ref|YP_375302.1| capsular polysaccharide biosynthesis protein I [Chlorobium luteolum DSM 273] gi|78167161|gb|ABB24259.1| capsular polysaccharide biosynthesis protein I [Chlorobium luteolum DSM 273] Length = 337 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 151/353 (42%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS----------LKEISQSN 50 M ++VTG AGFIGS++ L+ D +T N+N L++++ Sbjct: 1 MNVLVTGAAGFIGSSVSGRLLERG-------DCVTGVDNMNDYYEVSLKEARLQQLTPHE 53 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F++ DI DR+ + + D +VN AA++ V SI +I +NI+G +LE Sbjct: 54 AFTFVEADIADRKAMEELFARGKFDRVVNLAAQAGVRYSITNPHSYIESNIVGFINILEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG+ + FS D +P S Y+A+K +++ + Sbjct: 114 CR---------HNGVRHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +P YGP+ P+ + L +++G + ++ G++ RD+ Y++D Sbjct: 165 TYSHLYRLPTTGLRFFTVYGPWGRPDMALFLFTDAILKGKPIKVFNYGKHRRDFTYIDDI 224 Query: 230 VRALYLVL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + L K G YNIG + + +D + A + Sbjct: 225 VEGVIRTLDHVAEPNPLWSGAKPDPGSSRAPWRVYNIGNSKPVELMDYI--------AAL 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T + +PG D ++ ++ + P ++ G+ + V WY Sbjct: 277 ERELGRTAEKEMLPLQPGDVPDTYADVDQLIEDVQYKPSTTVDDGIRRFVAWY 329 >gi|77460292|ref|YP_349799.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1] gi|77384295|gb|ABA75808.1| putative LPS biosynthesis related UDP-glucuronic acid epimerase [Pseudomonas fluorescens Pf0-1] Length = 336 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + + L+ +V+ ID L Y L L +++ F F++ Sbjct: 1 MKILVTGAAGFIGFHVSQALLARGD-EVVGIDNLNDYYEVALKDARLAQLTPQEGFRFIR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + + + +V+ AA++ V S+ + +N+ G +LE Sbjct: 60 MDIGDRTAMAELFETEGFEKVVHLAAQAGVRYSLENPHAYADSNLTGFLNVLE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG+ + F+ +D +P S Y+ATK +++ + ++ H Y Sbjct: 114 CRQTHVK---HLVYASSSSVYGANESMPFAVQDNVDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ L + ++EG + ++ G++ RD+ Y++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPDMSPFLFVRAILEGKPLKVFNYGKHRRDFTYIDDIVDGVIR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL YNIG + + +D + I L +H Sbjct: 231 VLDHVAAPNAQWSGLKPDPASSAAPWRLYNIGNSQPVELLDYIKHIEQALGKT-----TH 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 EL+ +PG D ++K + G+ P +ESG+ + V WY D Sbjct: 286 KELLPL---QPGDVEHTYADVEQLKIDTGYAPDTPIESGIQRFVNWYKD 331 >gi|25026936|ref|NP_736990.1| putative GDP-D-mannose dehydratase [Corynebacterium efficiens YS-314] gi|23492216|dbj|BAC17190.1| putative GDP-D-mannose dehydratase [Corynebacterium efficiens YS-314] Length = 307 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 42/335 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGFIGS L + L D V VID + + NL+ L + + Sbjct: 1 MKILVTGGAGFIGSNLVKQLQKDGVSDVAVIDDFSTGFRKNLDGLD-------ITLFEGS 53 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DRE + A + A+V+ AA V RSI N GT +LE R+ + + Sbjct: 54 ILDRELLAEATRGAH--AVVHLAARPSVPRSIQDPVASHHANATGTLYVLEAARVENAHV 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + S+ VYG+ SE + P SPY+ +K +++ LA+ Y +P Sbjct: 112 T----------LASSSSVYGANKVLPKSEKLRAMPISPYAVSKLATETYALAYSAVYDLP 161 Query: 179 VLLSNCSNNYGP----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 VL N YGP H +IP + ++G + + GDG RD+ +V+ + + Sbjct: 162 VLPFRFFNVYGPGQAAGHAYAAVIPAFVDAALKGLPLPIQGDGLQTRDFTFVDTVTQTIS 221 Query: 235 LVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ R + N+ +D++ + +L + + + + E R G R Sbjct: 222 RAAREHIRSEDSVNLAFGTRHSLLDVIEVMEEILGSPLDRDHK--------ESRTGDVR- 272 Query: 294 YAIDSSKIKSE-IGWFPQEN---MESGLNKTVCWY 324 DS + I FP+ N + G+ KT+ W+ Sbjct: 273 ---DSQAANDQLISLFPEINPVGLSEGIAKTIEWF 304 >gi|242281289|ref|YP_002993418.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] gi|242124183|gb|ACS81879.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] Length = 335 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 47/350 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ + +V+ +D L Y N+ N LK+I ++ F+F Sbjct: 1 MKVLVTGAAGFIGFHLSKRLLAEGH-EVVGLDILNDYYDVNVKKNRLKQIEDNDKFTFAY 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + + +VN AA++ V S++ +I +N++G +LE R Sbjct: 60 MDMADREAMEKLFAKEKFTHVVNLAAQAGVRYSLINPQAYIDSNVVGFMNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG FS D +P S Y+ATK S++ + ++ H + Sbjct: 116 -----HNGVEHLVYASSSSVYGLNTNMPFSIHDNVDHPISMYAATKKSNELMAHSYSHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + L + E + ++ G+ +RD+ +++D V + Sbjct: 171 NIPTTGLRFFTVYGPWGRPDMALFLFTKAIFEDKPINVFNHGKMLRDFTFIDDIVEGVVR 230 Query: 236 VLKKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 V+K RI YNI GNN+ + E+ L+ I K Sbjct: 231 VMKNTAKPNADWSGDAPDPGTSPAPFRI---YNI-GNNQPTELMRYIEV---LEDCIGKK 283 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D P YA + + ++ + P+ +E G+ K V WY Sbjct: 284 AEKNMMPLQAGDVPS---TYA-NVDDLVRDVDFKPETTVEEGIAKFVEWY 329 >gi|332716866|ref|YP_004444332.1| UDP-glucuronic acid epimerase [Agrobacterium sp. H13-3] gi|325063551|gb|ADY67241.1| UDP-glucuronic acid epimerase [Agrobacterium sp. H13-3] Length = 340 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR +VTG AGFIG + + L+ D V D +T ++ SLKE +S+SN F Sbjct: 1 MRYLVTGTAGFIGFYVAKRLL-DAGHFVTGFDGMTKYYDV-SLKEKRHAILSRSNGFRAE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D + ++ A + +P+ I++ AA++ V S+ +I +N+IG+ W Sbjct: 59 IGMLEDTDALKRAAEAAEPEIIIHLAAQAGVRYSLENPRAYIDSNLIGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L K + + L + ST +YG+ +K F+E D P + Y+ATK S + + ++ H Sbjct: 109 NMLELAKNLRVKHLMLASTSSIYGANEKIPFAESDKADEPMTLYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHVRA 232 + +P YGP+ P+ + P+ I G + +YG G RD+ Y++D V Sbjct: 169 LHKLPTTAFRFFTVYGPWGRPD-MAPIKFVDAISNGEPIDIYGQGNMSRDFTYIDDLVEG 227 Query: 233 L-----YLVLKKGRIGER--------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + + ++ R+ E NIGG + + V + K Sbjct: 228 IVRLSQVIPSEENRVTEEGVTDTLSHHAPFRIVNIGGGQPVELMHFV--------ETVEK 279 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R +++ G+ PQ +E G+ V WY D Sbjct: 280 AVGRPAIRNMLPMQQGDVPRTFASPDLLRALTGYVPQTPVEEGIKALVAWYRD 332 >gi|323704228|ref|ZP_08115807.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536294|gb|EGB26066.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] Length = 304 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 31/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + +++ + V+V+D L+ +G L + + ++ F ++D+ Sbjct: 1 MKILITGGAGFIGSNIVDFMI-EKGYDVVVVDNLS-SGKLEYVNKKAK-----FYKIDLT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + D +++ AA+ + +SI NI+GT LLE R Sbjct: 54 D-EYLWQVFDNERLDLVIHEAAQVDIQKSIKDPVVDAKVNILGTINLLECCR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + + S+ VYG L GL E P S Y +K + + + + YG+ Sbjct: 105 -KYNLKKIIYASSAAVYGDPLYLGL-DERHRLEPVSFYGISKYTGESYLRIYSKLYGLKY 162 Query: 180 LLSNCSNNYG---PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + SN YG + +I I +M+ G ++GDG RD++YV+D V A YL Sbjct: 163 TILRYSNVYGIRQDINGNTGVISSFIGKMLNGDRPIIFGDGNQTRDFVYVKDVVYANYLA 222 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L KG + NI NN +V I ++D + Y + R + + Sbjct: 223 LYKGE-NQIINISTNNSTTINKLVEIINGIMDTNLKPIY--------LPARTSEIEQSYL 273 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ++ K +GW PQ ++E GL + + +Y+ Sbjct: 274 NNIKAFEVLGWVPQYSLEQGLREMIDFYM 302 >gi|116747629|ref|YP_844316.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116696693|gb|ABK15881.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 335 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L L+ D V+ +D + Y NL N LK ++ F+FL+ Sbjct: 1 MNILVTGAAGFIGYHLAYRLLKDGN-TVIGLDNVNDYYDVNLKRNRLKRLAPFQSFAFLK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D I + +E DA+V+ AA++ V S+ ++ +N+ G +LE R Sbjct: 60 LDLHDTAGIEAMFRENAFDAVVHLAAQAGVRHSLTHPHSYVESNLTGFVNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + F S+ VYG+ + L +P S Y+ATK +++ + + H + Sbjct: 116 ---HHRIKHLVF--ASSSSVYGANVVMPLSVHHNVDHPLSLYAATKKANELMAHTYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++ G + ++ G+ RD+ Y++D + + Sbjct: 171 GVPCTGLRFFTVYGPWGRPDMALFLFTRAILAGEPIRIFNYGRMRRDFTYIDDIIEGVVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++ YNIG N + ++ V I L K Sbjct: 231 MIPAPPSPNPQWDRESSDPATSYAPYRVYNIGNNRPVELMEYVAAIESCLGKEAQKE--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D S ++ + G+ P ++ G+ + + WY Sbjct: 288 -----FLPLQPGDVPATCADVSDLERDFGFRPSTTIQEGITRFIEWY 329 >gi|262040063|ref|ZP_06013323.1| UDP-glucuronate 5'-epimerase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042597|gb|EEW43608.1| UDP-glucuronate 5'-epimerase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 335 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ND QV+ ID + Y L + E +S F+F ++ Sbjct: 1 MKFLVTGAAGFIGFHVSKRLLNDGH-QVVGIDNINDYYDVKLKESRLEQLESPSFTFYKL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ + + Q + +++ AA++ V S+ + +N+ G +LE R Sbjct: 60 DLADRDGMSKLFETEQFERVIHLAAQAGVRYSLENPYAYADSNLTGYLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K Q L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 115 ---HNKVQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYS 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V A+ + Sbjct: 171 IPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIVEAIVRI 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++G YNIG ++ + +D + + L K+ Sbjct: 231 QDVIPQPDPEWTVEEGSPATSSAPYRVYNIGNSSPVELMDYINALEQALGLEAKKN---- 286 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + ++ + IG+ P+ ++ G+ V WY Sbjct: 287 ----MMPIQPGDVLNTSAETQALYETIGFKPETPVQQGVKNFVDWY 328 >gi|296123968|ref|YP_003631746.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] gi|296016308|gb|ADG69547.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] Length = 337 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL--FSFLQ 56 M+ +VTG AGFIG + L+ V+ +D L Y +L + NL F+F Q Sbjct: 1 MKYLVTGAAGFIGFHTTKKLIARGDT-VVGLDNLNDYYQVSLKHDRLAQLKNLPDFAFEQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +++ DR ++S + Q D +++ AA++ V S+ +I +N++G +LE Sbjct: 60 IELADRPAMKSLFERHQFDVVIHLAAQAGVRYSLTNPQAYIDSNLVGFCEILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K S+ VYG K FS D +P S Y+ATK +++ + + H + Sbjct: 114 CRHSGVK---HLAYASSSSVYGGNTKMPFSIHDNVDHPVSLYAATKKANELMAHTYSHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + ++EG + ++ +G+ RD+ +++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPDMAMWIFTKAILEGRPIDVFNEGKMRRDFTFIDDIVEGVVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V + YNIG N D++ IG L L K+ Sbjct: 231 VADNIPVPNTSWQSDHPDPATSSAPYRVYNIGNNRPE---DLMEMIGILESCLGKKAEK- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + +PG D + ++G+ P + +G+ + V WY Sbjct: 287 ----RLLPMQPGDVPATYADVDDLVKDVGFKPATPLATGIQRFVDWY 329 >gi|257388087|ref|YP_003177860.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] gi|257170394|gb|ACV48153.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] Length = 316 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 31/322 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+G L + L D + VL +L++ + + +F+ D+ D+ Sbjct: 11 VLVTGGAGFVGGQLVQTLAPDNDVTVL--------DDLSTGERDRVPDDVTFVHGDVRDQ 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ ++ D + + AA V S+ N T LL+ R + + Sbjct: 63 RKLKQEIEAA--DVVFHEAAVVGVPASLRDPPRSNHVNTGATVQLLDYARQYDT------ 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ +YG + ED P P+SPY K + D+ + Y +PV+ Sbjct: 115 ----RVVLASSAAIYGEPESVPIEEDHPLEPTSPYGVDKLAVDHYARVFAQQYDLPVVPL 170 Query: 183 NCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP P ++ + + + G + ++G G+ RD+++V+D V+A Sbjct: 171 RYFNIYGPRTGPNPYSAVVDVFLEQARSGDPITVHGTGEQTRDFVHVDDVVQANLRAATT 230 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 +G YN+G + ++ I D+ P I ++RPG D S Sbjct: 231 DEVGVAYNVGTGSSVSIAELAELIRTATDSDSP--------ITHTDERPGDISDSEADIS 282 Query: 300 KIKSEIGWFPQENMESGLNKTV 321 + + +G+ P ++ SG+++ V Sbjct: 283 RARERLGYEPTVDLRSGIDRLV 304 >gi|294054631|ref|YP_003548289.1| NAD-dependent epimerase/dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293613964|gb|ADE54119.1| NAD-dependent epimerase/dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 312 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 40/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGF+GS LC L+ +V+ +D + G ++ + + F ++ D+ Sbjct: 1 MRILVTGGAGFLGSHLCDRLLEQGN-EVICLDNY-FTGRKRNISHLFGNPDFEIMRHDVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D I N A + A + I T+++G +CL Sbjct: 59 DP-------FKVEVDQIYNLACPASPVHYQYNAIKTIKTSVMGAI----------NCLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R Q ST E YG D + + Y NP S Y K ++ L + + Sbjct: 102 AKRTGARVFQASTSECYG--DPSVHPQPESYWGNVNPIGIRSCYDEGKRCAETLFMDYHR 159 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + + N YGP P+ +++ I + ++G+ + +YG+GQ R + Y +D + Sbjct: 160 QNGVDIRIVRIFNTYGPRMCPDDGRVVSNFIVQALQGNDITVYGEGQQTRSFCYCDDLLN 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ++ + + NIG E F I L + +I + S +++I E P D Sbjct: 220 GFLKLMNQDELTGPVNIGNPGE-------FTILELAEKVIALTGSQSKII--FEPLPADD 270 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D + + ++GW P +++ GL T+ ++ Sbjct: 271 PKQRQPDITLAREKLGWEPTVSLDEGLKPTIAFF 304 >gi|259418578|ref|ZP_05742495.1| UDP-glucuronic acid decarboxylase 1 [Silicibacter sp. TrichCH4B] gi|259344800|gb|EEW56654.1| UDP-glucuronic acid decarboxylase 1 [Silicibacter sp. TrichCH4B] Length = 334 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 149/347 (42%), Gaps = 39/347 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+G+ LC+ L++D +V+ ID N + + N F+ + DI D Sbjct: 14 RIMVAGGAGFVGAHLCQRLIHDGH-EVICIDNFQTGRMCNIVHLLDDEN-FTCVSHDIVD 71 Query: 62 RECIRSALKEF-QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 L + Q D I N A + + + TN+ G LLE L Sbjct: 72 ------PLPDLGQVDEIYNLACAASPKKYQVDPIHTFKTNVFGALNLLELA------LQH 119 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHTY 175 D LQ ST EVYG + +E N P S Y K + + L + H Sbjct: 120 DAT----ILQSSTSEVYGDPEITPQAETYRGNVNTMGPRSCYDEGKRAVETLFYDFHHAR 175 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G ++ N YGP P+ ++I +T+ + G V +YGDG R + +V D V L Sbjct: 176 GAKTRVARIFNTYGPGMCPQDGRVISNFVTQALSGVPVTVYGDGSQTRSFCFVSDLVEGL 235 Query: 234 YLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 ++ + + YN+G E F + + +I S +E+ D P D Sbjct: 236 MALMACEDAPVQAYNLGNPGE-------FTVREVAQHIIETLGSKSEVAYL--DLPVDDP 286 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 R+ D S+ K+++ W P+ ++ GL TV ++ RP + L Sbjct: 287 RQRCPDISRAKADLNWAPKVSLADGLRMTVPYFA--GQLQRPAARLL 331 >gi|237654112|ref|YP_002890426.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T] gi|237625359|gb|ACR02049.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T] Length = 335 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 59/356 (16%) Query: 1 MRLIVTGGAGFIG-SALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL--- 51 M+++VTG AGFIG R L D++ NLN +LKE + L Sbjct: 1 MKILVTGAAGFIGMHTTLRLLARG--------DEVVGLDNLNDYYDPTLKEARLARLQPH 52 Query: 52 --FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F F+++D+ DR + + + D +++ AA++ V S+ ++ +N++G +LE Sbjct: 53 AGFRFVKMDVADRAGMEALFAAEKFDRVIHLAAQAGVRYSLQNPHAYVDSNLVGFMNILE 112 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLV 168 R K Q + S+ VYG K FSE D +P S Y+ATK +++ + Sbjct: 113 GCR--------HAKVQ-HLVYASSSSVYGGNTKMPFSESDSVDHPVSIYAATKKANELMA 163 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + H YG+P YGP+ P+ + L ++EG + ++ G+ RD+ YV+D Sbjct: 164 HTYSHLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGRMRRDFTYVDD 223 Query: 229 HVRALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLD 268 V + L RI E +NIG ++ + ++ V Sbjct: 224 IVEGVIRTLD--RIAEPDPAFDPMQPNPGTGSAPYRVFNIGNHDPVELMEFV-------- 273 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 A I + T F+ + G D++ + + G+ P ++ G+ + + WY Sbjct: 274 AAIEDALGTTAQKNFLPLQDGDVPATYADTAALNAWTGFAPATSVREGVGRFIAWY 329 >gi|157413781|ref|YP_001484647.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] gi|157388356|gb|ABV51061.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] Length = 333 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 153/343 (44%), Gaps = 31/343 (9%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVI-DKLTYAGNLN-SLKEISQSNLFSFLQVDI 59 ++VTG GFIGS L LV D K++ + + L G L+ S EI Q+ + D+ Sbjct: 5 VLVTGADGFIGSHLVETLVRDGYKVKAFCLYNSLGSWGWLDHSSPEIIQN--VEIILGDV 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ C+ ++L D + + A+ + S ++ TNI GT +L+ ++ Sbjct: 63 RDQFCVENSL--VGVDIVFHLASLIAIPHSYKAPQSYVETNINGTLNILQSSK------- 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + + ST E YG+ E SPY+ATK ++D L +++ ++ PV Sbjct: 114 --KLGIEKIIHTSTSETYGTAQYVPIDEKHHLVAQSPYAATKIAADQLAMSFFKSFNTPV 171 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV-LK 238 + N YGP +IP I+++ G + G RD+ YV+D V A V Sbjct: 172 TILRPFNTYGPRQSARAVIPTIISQLASGKNKVSLGKLSPTRDFNYVQDTVNAFKAVAFS 231 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAI 296 K G+ N N E D + I +++ I S S +E +RP + R Sbjct: 232 KNTTGKIINCASNFEISIEDTAYLIADIMNKKIEIS-SESE-----RERPENSEVNRLFG 285 Query: 297 DSSKIKSEIGWFP----QENMESGLNKTVCWY--LDNNWWWRP 333 D++ IK W P ++ GL T+ W+ +N ++RP Sbjct: 286 DNNLIKEITNWHPKYSGKKGFREGLKLTIDWFSKKENLSFYRP 328 >gi|159042009|ref|YP_001541261.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920844|gb|ABW02271.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 311 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 18/321 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS L L+ QV VID L+ G + ++ + N F + D+ Sbjct: 1 MKALITGGAGFIGSHLVDKLLAR-GYQVKVIDNLS-TGRIENITHVL--NKIQFTKTDLK 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E ALK+ D I +FAA V S + + N++ TF LLE R Sbjct: 57 NIEDTLKALKD--TDVIFHFAANPEVRVSTVSPEVHFNENVVATFNLLEAMR-------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D + S+ VYG ++ SED P P S Y A+KA+ + L+ A+ YG+ + Sbjct: 107 -RMDVREIVFASSSSVYGEPEEIPVSEDAPTRPVSVYGASKAACENLIHAYSRLYGMKAV 165 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + +N G + L + + + + + GDG VR +++V+D V A + + Sbjct: 166 ILRYANVVGLRLRHGVIYDLIMKLRKDPTRLEVLGDGTQVRSYIHVDDAVEATLIAHE-- 223 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 R G Y++ I + + + + L K + I PG +R A+ + Sbjct: 224 RTGGGYHVFNVASEDWITVDEVVNIITEELGAKPEIIHKPILHGVGWPGDVKRIALRIDR 283 Query: 301 IKSEIGWFPQENMESGLNKTV 321 ++ E+G+ P+ N + + TV Sbjct: 284 LR-ELGFKPRMNSKEAVRVTV 303 >gi|163852968|ref|YP_001641011.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163664573|gb|ABY31940.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 335 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 21/328 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R++VTG GFIGS L L ++ L + + G L+ + ++ L ++ D+ Sbjct: 7 RVLVTGADGFIGSHLAEALARRGAQVTALALYNSFDSHGWLDDVAPEVRTRL-DLVRGDV 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + D I + AA + S ++ TN+ GT +LE R Sbjct: 66 RDAAFVGRLVPGH--DVIFHLAALIAIPHSYAAPQAYVDTNVTGTLNVLEAAR------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ST EVYG+ ED P SPYSA+K +D + A+ ++G PV Sbjct: 117 --QHGTGRVVHTSTSEVYGTALTMPIREDHPLQGQSPYSASKIGADMMAEAFARSFGTPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGS-HVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + N YGP +IP I + ++ + GD VRD YV D A Sbjct: 175 VTLRPFNTYGPRQSERAIIPTVIRQALDPTCKTVTVGDTSPVRDLTYVADTAAAFLAAGA 234 Query: 239 KGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G YN G + D+ I +LD L + R + R Sbjct: 235 APDVEYGSAYNAGSQRQTSIGDL---IRLVLD-LTGCDKPVVQDTRRMRPVNSEVRALLA 290 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ ++ GW Q ++ GL +T+ W+ Sbjct: 291 DRARFEAASGWRAQISLREGLEQTIAWW 318 >gi|329964867|ref|ZP_08301875.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] gi|328524508|gb|EGF51576.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] Length = 317 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 153/339 (45%), Gaps = 41/339 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++ +TGGAGFI + L LV++ KI V D L+Y E + S ++ D Sbjct: 6 KIFITGGAGFIANRLISLLVDNNKIVVYDNFHRDTLSYT-------EYANHPNLSVVKGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++ + +V+ AA + +D I + N+IGT +LE R+ Sbjct: 59 VLDYALLEKSMA--GANIVVHAAAIAGIDTVIKSPTNTMRVNMIGTANVLEAARV----- 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWG 172 + D R + ST EV+GS +ED S Y+ +K + ++L +A+ Sbjct: 112 -NNVSD--RVIDFSTSEVFGS-HAFKSTEDTETVAGSAGEARWTYAVSKLAGEHLAMAYY 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + +PV N YGP E I + I R ++ +++YGDG +R W +V+D V Sbjct: 168 KEFNLPVCSVRPFNVYGPGQTGEGAIQIFIKRALKNEDIYIYGDGNQIRAWCFVDDFVAC 227 Query: 233 LYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG-- 289 L ++ + IGE +NIG N R + + L + + + I F +P Sbjct: 228 LQKCIEDSKAIGESFNIG--NSRAVLTT-----YGLAQTVCRVLGSSSKIIF---KPALS 277 Query: 290 HDRRYAIDS-SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D I S K ++G+ Q N+E G+ KT W +N Sbjct: 278 ADIELRIPSVEKAFEKLGFKAQVNVEEGILKTAEWIKNN 316 >gi|325970105|ref|YP_004246296.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] gi|324025343|gb|ADY12102.1| dTDP-glucose 4,6-dehydratase [Spirochaeta sp. Buddy] Length = 326 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 27/328 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC ++ + V +D L+ G L ++++ + F+F++ DI D Sbjct: 14 FLVTGGAGFIGSNLCEAILR-MGYIVRCLDDLS-TGFLKNIEDFKDNPKFTFIKNDIKDF 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +A K+ + +++ AA V RSI + N++GT ++E R Q+K Sbjct: 72 DNCLNATKDV--NYVLHQAAWGSVPRSIEMPLFYEQNNVMGTLNMMEAAR-------QNK 122 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 123 VK--KFIYASSSSVYGDEPNLPKKEGSEGNLLSPYALTKRTNEEYGKLYHKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +G P+ +IP I +++ ++GDG+ RD+ Y+E+ + A Sbjct: 181 RYFNVFGKRQNPDGDYAAVIPKWIKQLMNNEAPVIHGDGKQSRDFTYIENVIEANLKTCM 240 Query: 239 KG--RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GE YNI IDI E+ L Y DR G + Sbjct: 241 GSYDAAGEAYNIAFGGREYLIDIFNELTGALGIKTEPKYG--------PDRAGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK K+ +G+ P + E G+ + WY Sbjct: 293 DISKAKTLLGYDPDWSFERGIKAVIEWY 320 >gi|256810477|ref|YP_003127846.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] gi|256793677|gb|ACV24346.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] Length = 331 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 51/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ L + L+ D +V+ ID Y G ++K+ + F F++ DI Sbjct: 4 ILVTGGAGFIGTNLIKRLLEDNN-KVICIDN-NYTGRFENIKQFLNNPNFKFIKHDITKP 61 Query: 63 ECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I + D I N A + H +S + + T+I G +LE Sbjct: 62 IKIEKEI-----DEIYNLACPASPPHYQKSPIFT---LNTSIFGIINILELA-------- 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 KK + L ST EVYG+ + E P P + Y K ++ + + Sbjct: 106 --KKHNAKVLHASTSEVYGNPLEHPQKESYWGNVNPIGPRACYDEGKRVAETYCYEYWKS 163 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + + N YGPY P +++ I + ++ + +YGDG+ R + Y++D V Sbjct: 164 FGLDIRIVRIFNTYGPYVDPNDGRVVSNFIIQALKNEPLTVYGDGKQTRSFQYIDDLVEG 223 Query: 233 L--YLVLKKGRIGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + Y+ + K ++ + N+G E + E+ + + LIP+S S Sbjct: 224 MLKYMEVDKNKLENKLKDKFNWDTVPVLNMGNPEEF----TILELAYKVLELIPESESDI 279 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D P R D + K +GW P+ +E GL KT+ ++ Sbjct: 280 VFKPLPKDDPVRRRP---DITMAKEVLGWEPKVKLEEGLKKTIEYF 322 >gi|146339108|ref|YP_001204156.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS278] gi|146191914|emb|CAL75919.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS278] Length = 350 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 43/337 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +V GGAGFIGS +C L+ V+ D L + G+L +++ + FSF++ D+ Sbjct: 13 LRTLVAGGAGFIGSHICDTLLRRGDT-VICADNL-HTGSLRNIRPLLNHPNFSFIEHDVR 70 Query: 61 DRECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + I L D + N A + H + +G + T ++GT LLE R Sbjct: 71 EPLDIEGRL-----DRLYNLACPASPPHYQQDPIGT---MKTCVLGTLNLLELAR----- 117 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLA 170 + R LQ ST EVYG D + + Y P + Y K +++ L+ Sbjct: 118 -----EKSARILQASTSEVYG--DPEVHPQPETYAGHVNTIGPRACYDEGKRAAETLMFD 170 Query: 171 WGHTYGIPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + YGI + ++ N YGP + +++ I + + G+ + +YG G R + +V+D Sbjct: 171 YQRMYGIEIKVARIFNTYGPRMHENDGRVVSNFIVQALRGAPITVYGSGSQTRSFCFVDD 230 Query: 229 HVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 VR L ++++ G + N+G +E I E+ +S S E D Sbjct: 231 LVRGLEMLMESPGSVTGPINLGNPHEMSIEAIAREV-----LACTQSPSTLEFKPLPVDD 285 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P + + ++ +GW PQ + GL T+ ++ Sbjct: 286 PKRRKPVIATAERL---LGWHPQIPLRKGLEATIAYF 319 >gi|310767779|gb|ADP12729.1| UDP-sugar epimerase [Erwinia sp. Ejp617] Length = 335 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+N QV+ +D L Y NL + L I+Q F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVTQRLLN-AGHQVVGLDNLNDYYDVNLKTARLAHIAQYASFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DRE + + + +++ A++ V S+ + N++G +LE R Sbjct: 60 GDLADREGMAELFRCHRFQRVIHLGAQAGVRYSLENPLAYADANLVGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG + FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HNQVEHLLYASSSSVYGLNRQMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + MI G + +Y GQ RD+ Y++D V +++ Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTRAMIAGEIIDVYNHGQMRRDFTYIDDIVESIFR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ YNIG + + + + L + K+ Sbjct: 231 LQDVTPQADKDWTVEAGSPATSSAPYRVYNIGNSQPVTLMAYIEALESALGTVADKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G + D+ + IG+ PQ ++E G+ + V WY Sbjct: 288 -----MLPMQAGDVVETSADTRALYEVIGFKPQTSVEEGVARFVSWY 329 >gi|83944569|ref|ZP_00957020.1| hypothetical protein EE36_00135 [Sulfitobacter sp. EE-36] gi|83844606|gb|EAP82492.1| hypothetical protein EE36_00135 [Sulfitobacter sp. EE-36] Length = 351 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 160/354 (45%), Gaps = 57/354 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 ++++TG AGFIG L + L+ + I V D +T Y L + + QS FS + Sbjct: 18 KVLITGTAGFIGFHLAKLLLAEGFI-VHGFDGMTDYYDVALKQRRHQMLLQSPNFSATEG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ EF PD IV+ AA++ V S+ ++ +N+IGTF ++E R Sbjct: 77 MLEDQALFDRVADEFAPDVIVHLAAQAGVRYSLENPRAYLDSNVIGTFNVMEAAR----- 131 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + + ST VYG+ +E+MP+ + + Y+ATK +++ + + Sbjct: 132 ----RLKVKHLMMASTSSVYGA------NEEMPFIETEKADTQLTIYAATKKATESMGHS 181 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H + +P + YGP+ P+ + + M++G + +Y +G RD+ YV+D V Sbjct: 182 YAHIHDLPTTMFRFFTVYGPWGRPDLALYKFVDAMLDGRPIDIYNNGDMYRDFTYVDDLV 241 Query: 231 RALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDAL 270 RA+ L++ + ER NIG +++ + +D V I L Sbjct: 242 RAIRLLIDA--VPERPEGGVVPKGDSLSPVAPYRVVNIGNSDKVRLLDFVDAIEDCLGQK 299 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++Y + D P ++ +K+ G+ PQ + G+ + V WY Sbjct: 300 AQRNYMGMQ----TGDVPAT----WANAELLKTLTGYRPQTDFRDGIARFVEWY 345 >gi|288817582|ref|YP_003431929.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus TK-6] gi|288786981|dbj|BAI68728.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus TK-6] gi|308751182|gb|ADO44665.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus TK-6] Length = 320 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 33/332 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGFIGS LC + + QV+ +D G+ +++ + F F+ ++ Sbjct: 1 MRVLITGAAGFIGSHLCERFLKE-GFQVIGMDNFI-TGSPDNIAHLFGHPKFKFIHYNVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D +++FA + + + + +GT + L Sbjct: 59 NYIYLEGPV-----DLVLHFACPASPIDYLSHPIHTMKVDSLGTL----------NTLGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K + R++ ST EVYG E P P S Y +K S+ + +A+ + Sbjct: 104 AKLKRARYVFASTSEVYGDPTIHPQPETYWGYVNPVGPRSVYDESKRFSEAMCMAYHREH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 I V ++ N YGP ++IP IT+ ++G + +YGDG+ R + Y++D V + Sbjct: 164 SIDVRIARIFNTYGPRMRINDGRVIPNFITQALKGEPLTVYGDGKQTRSFCYIDDLVEGI 223 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + L + G GE N+G E ID+ LI + + I F + Sbjct: 224 FRLSTEDGLSGEIINLGNPQEVSIIDVA--------KLILELTGSSSKIVFRSLPADDPK 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D K K + W P+ +++ GL T+ W+ Sbjct: 276 RRCPDIKKAKELLSWEPKVSLKDGLKITINWF 307 >gi|222098929|ref|YP_002532987.1| udp-glucose 4-epimerase [Bacillus cereus Q1] gi|221242988|gb|ACM15698.1| UDP-glucose 4-epimerase [Bacillus cereus Q1] Length = 338 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++E + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNQEALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWG-HTY 175 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADREW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 I +L ++ S G P P L+P +A+ ++ E S + + DG + Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGI 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLAKGHVKALEKVLNTTGV-DAYNLGTGTGYSVLEMVEAFERVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAICFADASKAKRELGWEAKRGLEE-----IC---ADSWRWQ 328 >gi|220924197|ref|YP_002499499.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219948804|gb|ACL59196.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 327 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 22/330 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 R+++TG GFIGS L V +V + A +L +L + + +L + +++ D Sbjct: 5 RILITGAGGFIGSHLAEEAVRR-GAEVTALLHYNAARDLANLAD-ADPDLTAGMRIVFGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E + S L E Q + +++ AA + S ++ TNI GT +LE R Sbjct: 63 VNDPEFVLS-LVEGQ-EIVLHLAALIAIPYSYTAPRSYVRTNIEGTLNVLEAAR------ 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST EVYG+ E P SPYSA+K +D + ++ ++ +P Sbjct: 115 ---RVGVERVVHTSTSEVYGTAQYVPIDEVHPLQGQSPYSASKIGADKVAESYYRSFDVP 171 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 V+ N YGP IP I + + G + L G VRD +V D L Sbjct: 172 VVTVRPFNTYGPRQSARAFIPTVIGQALRGGEIKL-GATSPVRDLTFVADTAAGFLAAAT 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G G YN+G + + V E+ ++ L+ S I+ + R D Sbjct: 231 TPGLEGGTYNLGVGSGQS----VGEVAEMILRLMGSSARIVTDIQRLRPEKSEVGRLVSD 286 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + + + GW P +E GL +T+ ++ N Sbjct: 287 NRRFFAASGWAPAIKLEEGLARTIDFFRRN 316 >gi|163790740|ref|ZP_02185167.1| UDP-glucose 4-epimerase [Carnobacterium sp. AT7] gi|159874041|gb|EDP68118.1| UDP-glucose 4-epimerase [Carnobacterium sp. AT7] Length = 336 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 46/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+N +V+++D + + LN +KEI+ + FSF +VD Sbjct: 1 MAILVTGGAGYIGSHTTVELLN-AGHEVVIVDNFSNSKPEVLNRIKEITGKD-FSFYEVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++ + + K +A+++FA V S+ ++ N+ TF+L E + Sbjct: 59 VLNKTDLEAVFKIHDIEAVIHFAGYKAVGESVSKPLKYYHNNLTSTFVLAELMETY---- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 KK F S+ VYG + +ED+P + ++PY TK + + V A ++ Sbjct: 115 -NVKKMVFS----SSATVYGMNNISPLTEDLPLSTTNPYGTTKMMIEQILQDVYASDPSW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 I +L ++ S G P P L+P IT++ G + ++G DG Sbjct: 170 SIALLRYFNPIGAHESGRIGEDPTGIPNNLMPY-ITQVAVGKRDQLSVFGGDYDTTDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D H++A+ +L I E YN+G +D+V +P + Sbjct: 229 VRDYIHVVDLAKGHLKAVEKILSSEGI-EAYNLGTGIGYSVLDVVTNFEKATGKKVPYT- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 I+ RPG D+SK +E+GW + +E Sbjct: 287 -------IIDRRPGDIATCYSDASKAATELGWKAEHTLE 318 >gi|297531513|ref|YP_003672788.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] gi|297254765|gb|ADI28211.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] Length = 340 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 46/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L++ ++V+D T + L ++EI+Q + F + Q D Sbjct: 1 MPILITGGAGYIGSHTCVELLH-AGYDIVVVDSFTNSKPEALRRVQEIAQRD-FPYYQAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ + S + +A+++FA V S+ + NI GT +LL+ R + Sbjct: 59 LLERDALESVFAKHSIEAVIHFAGLKAVGESVAVPLLYYHNNITGTLVLLDVMRQYGV-- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K F S+ VYG ++ ED P P++PY TK + + + ++ Sbjct: 117 ---KNIVFS----SSATVYGMPERVPIREDFPLRPTNPYGRTKWMIEEMLRDLYVSDPSW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P IT++ G + ++G DG Sbjct: 170 SIALLRYFNPIGAHPSGRIGEDPNGIPNNLMPY-ITQVAVGKLKELRVFGNDYPTIDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL + E YN+G +++V IP Sbjct: 229 VRDYIHVVDLAIGHVKALEKVLAATGV-EAYNLGTGRGYSVLEVVSAFERATGVNIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + ++ RPG D +K K E+GW +E Sbjct: 285 -----YKIVDRRPGDVAVCYADPTKAKRELGWIAARGIE 318 >gi|32474159|ref|NP_867153.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] gi|32444696|emb|CAD74698.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] Length = 405 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 152/363 (41%), Gaps = 48/363 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAG+IGS L+ D +V+V D L+ G+ S+ E ++ D+ Sbjct: 34 MKVFVVGGAGYIGSHAVALLL-DAGHEVVVFDNLSR-GHAKSVPE------GLLVEGDLN 85 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S LKE DA+++FAA + V S+ + N++ T LLE R Sbjct: 86 DQAKLTSLLKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMR-------- 137 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + + ST YG D E P NP +PY +K + + + H YG Sbjct: 138 -AADVKKIVFSSTTATYGQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYA 196 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + G +H PE LIP+ + + + + ++G DG +RD++ Sbjct: 197 ALRYFNAAGARPDGTIGEHHDPESHLIPIVLQVALGQRESISIFGDDYPTPDGTCIRDYI 256 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V+D H+RAL LK G G + N+G +IV + IP+ Sbjct: 257 HVDDLGDAHLRALDR-LKPGE-GIQVNLGTGRGTSVREIVDACRAVTGHPIPEVMG---- 310 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV-CWYLDNNWWWRPLYKELK 339 E RPG D+ +GW P+ + KT W+ + P + L Sbjct: 311 ----ERRPGDPAELIADAKLAGEVLGWKPRYTDIQDIVKTAWNWHQTHPQVTTPFERPLS 366 Query: 340 PDN 342 P N Sbjct: 367 PSN 369 >gi|115523529|ref|YP_780440.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] gi|115517476|gb|ABJ05460.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] Length = 331 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 86/318 (27%), Positives = 132/318 (41%), Gaps = 32/318 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS + L+ DL V VID L+ G+ ++L S S ++ DI Sbjct: 7 VVTGGAGFIGSHVVDVLI-DLGFAVRVIDNLS-GGHRSNLAHHQSSAEVSLVEADIRTLM 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 SA + + + A + SI +++ N+ GT +LE R Sbjct: 65 LGHSAFDGAK--FVFHLAGIGDIVPSIEKPIDYMDVNVQGTVRVLECAR---------AA 113 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + + ++ YG L ED P P PY+ +K + VL W YG+PV Sbjct: 114 GVAKLVYAASSSCYG-LAATPTREDHPIEPMYPYALSKYQGEQAVLHWHKVYGLPVNSIC 172 Query: 184 CSNNYGP----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP + + + + G + GDG RD++YV D A Sbjct: 173 IFNAYGPRVRTTGVYGAVFGVFFRQKLAGKPYTVVGDGTQARDFIYVRDVAEAFVAAAVT 232 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 GER+N+G N + +V +G E++ ++ RPG D Sbjct: 233 PIAGERFNVGAGNPQSINRLVEILG-------------GEVV-YVPKRPGEPDVTHADIG 278 Query: 300 KIKSEIGWFPQENMESGL 317 KI +++GW P E G+ Sbjct: 279 KITTQLGWKPTVPFEQGV 296 >gi|325919697|ref|ZP_08181699.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas gardneri ATCC 19865] gi|325549805|gb|EGD20657.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas gardneri ATCC 19865] Length = 321 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNSYYDPQLKRDRVAALCPDIDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMV 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFEPATPVERGLPQVVDW 312 >gi|327542947|gb|EGF29397.1| nucleoside-diphosphate-sugar epimerase [Rhodopirellula baltica WH47] Length = 311 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 29/285 (10%) Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 N+FS DI D +R A++ D + + A+ + S + ++ TN+ GT +++ Sbjct: 34 NVFS---ADIRDPAAVRKAMEGV--DVVYHLASLIAIPYSYIAPHSYVETNVNGTLNVVQ 88 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL 169 + + R + ST EVYG+ +ED P SPYSA+K +D + + Sbjct: 89 AAKDLGTS---------RVVHTSTSEVYGTAKFVPITEDHPLQGQSPYSASKIGADQIAM 139 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ + + PV + N YGP +IP I+++ G GD RD+ +V D Sbjct: 140 SFFNAFETPVSIVRPFNTYGPRQSARAIIPTIISQIASGKRTLHLGDLTPTRDFNFVFDT 199 Query: 230 VRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-R 287 V V + +GE N+G E IG L+ +I E+++ + R Sbjct: 200 VNGFIAVGESANTVGEVVNVGTGFE-------ISIGDLVKLIIDVMGEEVEIVQDSDRIR 252 Query: 288 PGHDRRYAI--DSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD 326 P + + + K K+ GW P+ E + SG+ +T W+ D Sbjct: 253 PAGSEVFRLCGCAKKAKALTGWEPKFAGIEGLRSGIQETANWFTD 297 >gi|218681311|ref|ZP_03529208.1| putative UDP-glucuronate 5'-epimerase [Rhizobium etli CIAT 894] Length = 338 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV- 57 MR +TG AGFIG L R L+ + V D LT Y L ++ + S +F V Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-DVTGFDGLTPYYNVKLKEMRHAALSQFPAFTPVI 59 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + +A+ +PD +++ AA++ V S+ + ++ +N+ G+ W+ Sbjct: 60 SMLEDRPALEAAVLAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGS----------WN 109 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 110 IMEIARRAEIRHLMLASTSSIYGANATVPFHETDRADEPLTIYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGP+ P+ + M+E + +YG+G RD+ Y++D + A+ Sbjct: 170 HKIPTTAFRFFTVYGPWGRPDMALFKFTKNMLEDQPIEIYGEGNMSRDFTYIDDLIEAIV 229 Query: 235 LV------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + L + NIGG +D V + K+ Sbjct: 230 RLSAIAPSEDNRLDNVAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKALG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R + + G+ P ++ G+ V WYL+ Sbjct: 282 RPAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVKAFVEWYLE 331 >gi|315453921|ref|YP_004074191.1| GDP-mannose 4,6-dehydratase [Helicobacter felis ATCC 49179] gi|315132973|emb|CBY83601.1| GDP-mannose 4,6-dehydratase [Helicobacter felis ATCC 49179] Length = 365 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 17/244 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 +++G G GS L RYL+ DL V I + + + N + I + N F D Sbjct: 6 LISGITGQDGSYLARYLL-DLGYDVHGIKRRSSSFNTARIDSIYEDTHTSHNRFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + S + + +P I N AA+SHV S + + +GT LLE R Sbjct: 65 LTDSSNMTSLVAKIRPTEIYNLAAQSHVQVSFEMPEYTANVDALGTLRLLEAMRFL---- 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + KD RF Q ST E+YG + + +E+ P+NP SPY+ K + Y+ + YG Sbjct: 121 --NLKDT-RFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKLYAYYITKNYREAYGFF 177 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 + N+ P F + I +AI+RM+ G LY G+ RD+ + +D+V+A++ Sbjct: 178 AVNGILFNHESPVRGETFVTRKITMAISRMLLGLQDCLYLGNLDAKRDYGHAKDYVKAMH 237 Query: 235 LVLK 238 L+L+ Sbjct: 238 LILQ 241 >gi|326486455|gb|ADZ76283.1| NAD dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni] Length = 318 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 43/338 (12%) Query: 1 MRLI-VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+I +TGG+GF+GS LC+ L+++ +++ +D Y G + ++KE+ ++ F+F++ DI Sbjct: 1 MRVILITGGSGFLGSNLCKRLLSEGN-KIICVDN-NYTGRIENIKELLENENFTFIEHDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILG--ADEFITTNIIGTFILLEETRLWWSC 117 C+ I L D I NFA + + G A + I T++ G +LE + + + Sbjct: 59 CEPLKITQKL-----DQIYNFACPAS-PPAYQGNHAIKTIKTSVYGAINMLELAKEYNAT 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLA 170 + LQ ST EVYG D + ++ Y NP + Y K ++ L Sbjct: 113 I----------LQASTSEVYG--DPLVHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFD 160 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + G+ + + N YG P +++ I + + G + +YGDG R + YV+D Sbjct: 161 YHRHEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDD 220 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + + V+ + N G E F I L +I K+ S +++I +D Sbjct: 221 LIDIIIKVMNSSKDFQGPINTGNPGE-------FTIKELAQKVIEKTGSKSKII--YKDL 271 Query: 288 PGHD-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 272 PLDDPTQRRPDISLAKAKFNWEPKINLDEGLEKTIKYF 309 >gi|307717767|ref|YP_003873299.1| protein CapI [Spirochaeta thermophila DSM 6192] gi|306531492|gb|ADN01026.1| protein CapI [Spirochaeta thermophila DSM 6192] Length = 350 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 40/353 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK------------EI 46 MR +VTG AGF+G L +L+ +V+ ID L+ Y L + E Sbjct: 1 MRFLVTGSAGFVGFHLVDFLLRKGH-EVVGIDNLSPYYDVGLKKARLAEHGIVVGERGEG 59 Query: 47 SQSNL---FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 +S + + F D+ DR + + L+ + +++ AA++ V S+ + ++ +NI G Sbjct: 60 MRSRIWEGYIFYFEDVRDRVFLETLLRRHGVERVIHLAAQAGVRYSLTHPEVYLQSNIEG 119 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKA 162 + +LE +R C + R + ST VYG +K FSE D +P S Y+ATK Sbjct: 120 FWAVLEASR---RCGVE------RLVYASTSSVYGLNEKVPFSERDGVDHPVSLYAATKR 170 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S++ + H YG+P + YGP+ P+ R+++G + ++ G RD Sbjct: 171 SNELFAHVYSHIYGLPTIGLRFFTVYGPWGRPDMAYFSFTERILKGEPIEVFNHGHMERD 230 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDI----VFEIGF-----LLDAL--I 271 + YVED V + V + + ER + + R + V+ IG L+D + I Sbjct: 231 FTYVEDVVEGVARVAEHP-LPERRDWDPGDPRPDRSSAPFWVYNIGHGSPVGLMDFIRAI 289 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ I + E +PG + ++ +G+ P + G+ + V WY Sbjct: 290 EEALGREARIVYREMQPGDVVATHASTKSLEEAVGYRPSTPLSEGIRRFVAWY 342 >gi|219684450|ref|ZP_03539394.1| WbnF [Borrelia garinii PBr] gi|219672439|gb|EED29492.1| WbnF [Borrelia garinii PBr] Length = 355 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVND---------------LKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + R LV + LK + ++ L + + + Sbjct: 1 MKIFLTGIAGFIGFHVARKLVEEGHEVLGIDILNDYYELKFKNERLETLGFCSKDVKIHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLKLFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRIY-------KENIKHFVYASTSSVYGINENIPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEVIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGEPINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVSDIANGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFIREL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDIVKLKNDVGYEAKISIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|294677488|ref|YP_003578103.1| UDP-glucuronate 5'-epimerase [Rhodobacter capsulatus SB 1003] gi|294476308|gb|ADE85696.1| UDP-glucuronate 5'-epimerase-2 [Rhodobacter capsulatus SB 1003] Length = 340 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 87/350 (24%), Positives = 162/350 (46%), Gaps = 49/350 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 R+++TG AGFIG L R L+ + +V D +T ++ +LK + L F+ + Sbjct: 7 RILITGTAGFIGFHLARLLLAE-GWRVQGYDGMTDYYDV-ALKHDRHAILRAHPNFTATE 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D+ + F+P+ IV+ AA++ V S+ ++ +N+IGTF ++E R Sbjct: 65 AMLEDQPRFDAVADAFRPEVIVHLAAQAGVRYSLENPRAYLDSNVIGTFSVIEAAR---- 120 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + Q + L I ST VYG+ K F+E D + Y+ATK +++ + A+ H Sbjct: 121 ------RLQVKHLLIASTSSVYGANPKMPFAETDKADTQLTIYAATKKANESMAHAYAHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +PV + YGP+ P+ + + +++ + +Y G+ RD+ Y++D VR + Sbjct: 175 WNLPVTMFRFFTVYGPWGRPDLALYKFVDAILDDRPIDIYNHGEMYRDFTYIDDLVRGIR 234 Query: 235 LVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 L++ + +R NIG +++ + +D V I L Sbjct: 235 LLIDA--VPQRPEDGVVPAGDSLSPVAPFRIVNIGNSDKVRLLDFVEAIEACL------- 285 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T L ++ + G D++ + S G+ PQ + G+ + V WY Sbjct: 286 -GKTALRNYLPMQKGDVPATFADATLLHSLTGYRPQTDFRDGIARFVDWY 334 >gi|254424021|ref|ZP_05037739.1| NAD dependent epimerase/dehydratase family [Synechococcus sp. PCC 7335] gi|196191510|gb|EDX86474.1| NAD dependent epimerase/dehydratase family [Synechococcus sp. PCC 7335] Length = 335 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 46/349 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M ++VTG AGFIG L L+ K V ID + G L LK S FS Sbjct: 1 MAILVTGAAGFIGFYLSLRLLEAGK-SVYGIDVMNDYYDVSLKEGRLAQLKPFSN---FS 56 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F Q+DI DR + + + +V+ AA++ V S+ + +N++G +LE R Sbjct: 57 FGQIDISDRTAMSDLFGQHSFECVVHLAAQAGVRYSLQNPLAYADSNLLGFVNILEGCR- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWG 172 Q K F S+ VYG K F ++D +P S Y+ATK S++ + A+ Sbjct: 116 ------QSKVGHLVF--ASSSSVYGKNKKVPFATDDRVDHPVSLYAATKKSNELMAHAYS 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H YG+P+ YGP+ P+ + + +G+ + +Y G+ RD+ Y++D V Sbjct: 168 HLYGLPMTGLRFFTVYGPWGRPDMAYFKFVDAIAKGNSIDVYNHGKMKRDFTYIDDVVEG 227 Query: 233 LYLV-------LKKGRIGER----------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + V L K YNIG ++ +D + I + K Sbjct: 228 IIRVMNRPPTPLSKAEAAAENKDTNAPYKIYNIGNHSPVTLMDFITTIEVAMGKKAEKI- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + ++G+ P + G+ K V WY Sbjct: 287 -------MLPMQPGDVPVTYADVQDLMDDVGFKPSTPLSVGIQKFVDWY 328 >gi|37958863|gb|AAP68521.1| uridine diphosphate galacturonate 4-epimerase [Klebsiella pneumoniae] Length = 334 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 154/354 (43%), Gaps = 52/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNL 51 M+ ++TG AGFIG + + L+N+ V+ ID N+N ++S S Sbjct: 1 MKFLITGAAGFIGFHIAQRLLNEGH-DVVGID------NMNDYYDVSLKQARLDRLASPA 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F Q+D+ DRE + Q + +++ AA++ V S+ + N++G +LE Sbjct: 54 FHFQQLDLADREGMAKLFATEQFNRVIHLAAQAGVRYSLENPYAYADANLMGYLNILE-- 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLA 170 C K + S+ VYG K FS ED +P S Y+ATK +++ + Sbjct: 112 ----GCRHTKVK---HLVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YGIP YGP+ P+ + M+EG + +Y G+ RD+ Y++D V Sbjct: 165 YSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 A+ V ++ G YNIG ++ + +D + + L Sbjct: 225 EAVVRVQDVIPQANANWTVESGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGMEAQ 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ +L ++ + D + +G+ PQ +++ G+ V WY D Sbjct: 285 KNMMPIQLGDVLDT--------SADPQPLYDLVGFKPQTSVKEGVKNFVEWYKD 330 >gi|323495235|ref|ZP_08100317.1| putative nucleotide sugar epimerase [Vibrio brasiliensis LMG 20546] gi|323310495|gb|EGA63677.1| putative nucleotide sugar epimerase [Vibrio brasiliensis LMG 20546] Length = 334 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA+ L + V+ +D L Y +L + L+ I N F F++ Sbjct: 1 MKYLVTGAAGFIGSAVAERLC-EAGHYVVGLDNLNDYYQVSLKHDRLERIEHEN-FKFVE 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + + + D +++ AA++ V SI + +N++G +LE R Sbjct: 59 MDLADRDGIANLFSDEKFDRVIHLAAQAGVRYSIDNPMSYADSNLVGHLTILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + + S+ VYG K FS D +P S Y+ATK S++ + + H Y Sbjct: 115 ---HNKVEHLVYA--SSSSVYGLNQKMPFSTSDSVDHPISLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++ G + +Y +G RD+ Y++D V + Sbjct: 170 GVPTTGLRFFTVYGPWGRPDMALFKFTKAIVNGETIDVYNNGDMRRDFTYIDDIVEGIIR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G +NIG + K +D + + L K+ Sbjct: 230 IQDVVPAKTTDWSVESGSPATSSAPYKVFNIGHGSPVKLMDFIESLETSLGIEAKKN--- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+ +PG ++ + G+ P+ ++ G+ V WY D Sbjct: 287 -----FMPMQPGDVYATYAETEDLFDATGYTPKVKVQEGVQAFVEWYRD 330 >gi|312139420|ref|YP_004006756.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] gi|311888759|emb|CBH48071.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] Length = 331 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 48/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG++GS +C ++ + +V+V+D L+ GN +++ ++ F++ DI Sbjct: 1 MRLLVTGGAGYVGS-VCTTVLLERGHEVVVVDDLS-TGNADAVPAGAE-----FIEGDIA 53 Query: 61 D--RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + S + D +++FAA+S V S+ +++ N++ T LLE RL + Sbjct: 54 AVAGSVLGSGNSTPRFDGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTP- 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST YG ++ +ED P P++PY ATK + D+ + ++ + + + Sbjct: 113 --------RLVFSSTAATYGEPERTPITEDAPTRPTNPYGATKLAIDHAITSYANAHSLA 164 Query: 179 VLLSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y LIPL + + + + ++G DG VRD++ Sbjct: 165 ATSLRYFNVAGAYKGAGENRVVETHLIPLVLQVALGQREKISVFGTDWPTKDGTAVRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 +V D A L L+ G YN+G GF + +I T L Sbjct: 225 HVLDLADAHLLALESSVPGHHRIYNLGSG-----------AGFTVREVISACERVTGLPI 273 Query: 283 FIEDRPGHDRRYAI---DSSKIKSEIGWFPQEN 312 ED P A+ S + E+GW P Sbjct: 274 AAEDAPRRAGDPAVLIASSDRAVDELGWRPAHT 306 >gi|315639148|ref|ZP_07894314.1| GDP-mannose 4,6-dehydratase [Campylobacter upsaliensis JV21] gi|315480785|gb|EFU71423.1| GDP-mannose 4,6-dehydratase [Campylobacter upsaliensis JV21] Length = 287 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 130/273 (47%), Gaps = 17/273 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GNLNSLKE-ISQSNLFSFLQVD 58 M+ ++TG G +GS + +L+ + +++ + + + N+ L E I++ + S D Sbjct: 1 MKALITGFTGQVGSQMADFLLENTDYKIIALMRWQESMDNIYHLSERINRGDRISIFYAD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D ++ + +PD I + AA+S S E + TNIIGT +LE RL Sbjct: 61 LNDYSSLQKLFETHRPDVIFHLAAQSFPKTSFEIPLETLQTNIIGTANILENIRLLKQ-- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +D D + S+ EVYG KG+ E+ P++ +SPYS +K +DYL +G YGI Sbjct: 119 -KDGYDPVVHI-CSSSEVYGRAQKGIKLDENTPFHGASPYSISKIGTDYLGRFYGEAYGI 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRA 232 ++ + GP F E + I + G V G+ + R + D VRA Sbjct: 177 RTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGLEEPVIKVGNLDSTRTFQDARDAVRA 236 Query: 233 LYLV---LKKGRI--GERYNIGGNNERKNIDIV 260 YL+ KG + GE +NI G K +I+ Sbjct: 237 YYLLSLESAKGNVPCGECFNIAGEEAFKLPEII 269 >gi|27545233|ref|NP_775349.1| UDP-glucuronic acid decarboxylase 1 [Danio rerio] gi|21105472|gb|AAM34679.1|AF506235_1 UDP-glucuronic acid decarboxylase [Danio rerio] Length = 418 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 144/330 (43%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 88 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 145 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 146 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 188 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 189 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 248 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +G H + +++ I + ++G + +YG G R + YV D V L Sbjct: 249 VEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGL- 307 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L I N+G E + E G L+ +L+ S SH + + +D P +R Sbjct: 308 VSLMNSNISSPVNLGNPEEH----TILEFGSLIKSLV-ASRSHIQFLSEAQDDP---QRR 359 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K +GW P +E GLNKT+ ++ Sbjct: 360 RTDIRRAKLLLGWEPVVPLEEGLNKTIQYF 389 >gi|31794804|ref|NP_857297.1| UDP-glucose 4-epimerase GALE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) [Mycobacterium bovis AF2122/97] gi|57117137|ref|NP_215015.2| UDP-glucose 4-epimerase GALE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) [Mycobacterium tuberculosis H37Rv] gi|121639547|ref|YP_979771.1| UDP-glucose 4-epimerase galE1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663497|ref|YP_001285020.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|148824838|ref|YP_001289592.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis F11] gi|167968555|ref|ZP_02550832.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis H37Ra] gi|215405682|ref|ZP_03417863.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis 02_1987] gi|215413554|ref|ZP_03422226.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis 94_M4241A] gi|215424876|ref|ZP_03422795.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T92] gi|215432605|ref|ZP_03430524.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis EAS054] gi|215447971|ref|ZP_03434723.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T85] gi|218755412|ref|ZP_03534208.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis GM 1503] gi|219559705|ref|ZP_03538781.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T17] gi|224992044|ref|YP_002646733.1| UDP-glucose 4-epimerase [Mycobacterium bovis BCG str. Tokyo 172] gi|254552746|ref|ZP_05143193.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184551|ref|ZP_05762025.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|260198673|ref|ZP_05766164.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|260202817|ref|ZP_05770308.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289441063|ref|ZP_06430807.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|289445227|ref|ZP_06434971.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|289555893|ref|ZP_06445103.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 605] gi|289571870|ref|ZP_06452097.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T17] gi|289572281|ref|ZP_06452508.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289747470|ref|ZP_06506848.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 02_1987] gi|289748148|ref|ZP_06507526.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T92] gi|289755761|ref|ZP_06515139.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis EAS054] gi|289759792|ref|ZP_06519170.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis T85] gi|289763810|ref|ZP_06523188.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis GM 1503] gi|294995455|ref|ZP_06801146.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 210] gi|297636306|ref|ZP_06954086.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 4207] gi|297733300|ref|ZP_06962418.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN R506] gi|298527110|ref|ZP_07014519.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 94_M4241A] gi|306777987|ref|ZP_07416324.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu001] gi|306778518|ref|ZP_07416855.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu002] gi|306786540|ref|ZP_07424862.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu003] gi|306790907|ref|ZP_07429229.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu004] gi|306791227|ref|ZP_07429529.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu005] gi|306796013|ref|ZP_07434315.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu006] gi|306801260|ref|ZP_07437928.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu008] gi|306805474|ref|ZP_07442142.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu007] gi|306969766|ref|ZP_07482427.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu009] gi|306974105|ref|ZP_07486766.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu010] gi|307081813|ref|ZP_07490983.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu011] gi|307086428|ref|ZP_07495541.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu012] gi|313660632|ref|ZP_07817512.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN V2475] gi|7437261|pir||C70562 probable DTDP-Glucose 4 - Mycobacterium tuberculosis (strain H37RV) gi|31620401|emb|CAD95844.1| UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE 4-EPIMERASE) [Mycobacterium bovis AF2122/97] gi|48596284|emb|CAB00927.2| UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE 4-EPIMERASE) [Mycobacterium tuberculosis H37Rv] gi|121495195|emb|CAL73681.1| UDP-glucose 4-epimerase galE1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148507649|gb|ABQ75458.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|148723365|gb|ABR07990.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis F11] gi|224775159|dbj|BAH27965.1| UDP-glucose 4-epimerase [Mycobacterium bovis BCG str. Tokyo 172] gi|289413982|gb|EFD11222.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|289418185|gb|EFD15386.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|289440525|gb|EFD23018.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 605] gi|289536712|gb|EFD41290.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289545624|gb|EFD49272.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T17] gi|289687998|gb|EFD55486.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 02_1987] gi|289688735|gb|EFD56164.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T92] gi|289696348|gb|EFD63777.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis EAS054] gi|289711316|gb|EFD75332.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis GM 1503] gi|289715356|gb|EFD79368.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis T85] gi|298496904|gb|EFI32198.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 94_M4241A] gi|308213701|gb|EFO73100.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu001] gi|308328455|gb|EFP17306.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu002] gi|308328864|gb|EFP17715.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu003] gi|308332705|gb|EFP21556.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu004] gi|308340198|gb|EFP29049.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu005] gi|308343485|gb|EFP32336.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu006] gi|308347983|gb|EFP36834.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu007] gi|308351925|gb|EFP40776.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu008] gi|308352684|gb|EFP41535.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu009] gi|308356559|gb|EFP45410.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu010] gi|308360517|gb|EFP49368.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu011] gi|308364132|gb|EFP52983.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu012] gi|323717684|gb|EGB26885.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CDC1551A] gi|326905469|gb|EGE52402.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis W-148] gi|328460402|gb|AEB05825.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 4207] Length = 314 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTG AGFIGS L L+ D V+ +D G +L+ ++ ++ F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGH-SVVGLDNFA-TGRATNLEHLADNSAHVFVEADIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L++ +P+ + + AA+ V RS+ N+IGT L E R Sbjct: 59 TAD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAAR-------- 109 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + S+ +YG+ + E P +P+SPY+A K + + + + H YG+ Sbjct: 110 -QTGVRKIVHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDC 168 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A V Sbjct: 169 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRV 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G R+NIG E + L + + + + F R G +R + Sbjct: 229 SADVGGGLRFNIGTGKETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRSCL 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + +GW PQ + G+ +TV ++ Sbjct: 281 DIGLAERVLGWRPQIELADGVRRTVEYF 308 >gi|228988678|ref|ZP_04148764.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229159011|ref|ZP_04287067.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 4342] gi|228624430|gb|EEK81201.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 4342] gi|228771129|gb|EEM19609.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 338 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 96/352 (27%), Positives = 159/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + D Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTKIPLTYYYNNIISTIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL V+K I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVIKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|225874664|ref|YP_002756123.1| NAD-dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] gi|225792360|gb|ACO32450.1| NAD-dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] Length = 316 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 40/337 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGF+GS L L++D V+ +D L G+L +LK ++ + F F+Q DI Sbjct: 1 MRILITGAAGFLGSHLTDALLSDGHT-VVGVDNLC-TGSLANLKHLANESRFEFVQQDIV 58 Query: 61 DRECIRSALKEFQPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + D ++NFA+ S VD + LG E ++ GT LE R + + Sbjct: 59 E------PFDVGKVDYVLNFASPASPVDYARLGP-ETLSVGSDGTRNALEIARRYGA--- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 +FL ST E YG ED P P S Y K S+ L +A+ Sbjct: 109 -------KFLHASTSECYGDPTVHPQKEDYWGNVNPIGPRSVYDEAKRFSEALTMAYHRY 161 Query: 175 YGIPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ L N YGP ++I + + ++G + +YG+G R + YV D V Sbjct: 162 YGVDTRLVRIFNTYGPRLQKNDGRVISNFMVQALKGEDLTVYGEGNQTRSFCYVSDEVEG 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 + L L NIG +E + I A++ + + ++++ +D P Sbjct: 222 I-LRLAHSDEHLPTNIGNPSE-------WTILECAKAVLRVTGAESKIVFRPLPQDDPMQ 273 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + D SK K +GW P+ ++E+GL ++ ++ ++ Sbjct: 274 RKP---DISKAKRILGWEPKVDLETGLRLSLEYFRES 307 >gi|254382740|ref|ZP_04998097.1| UDP-D-glucose-4-epimerase [Streptomyces sp. Mg1] gi|194341642|gb|EDX22608.1| UDP-D-glucose-4-epimerase [Streptomyces sp. Mg1] Length = 333 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 142/330 (43%), Gaps = 38/330 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R ++ + +V+V+D L+ GN + + E + S L Sbjct: 1 MTFLITGGAGYIGAHVVRAMLIAGE-KVVVLDDLS-TGNEDRVPEGVPLVIGSVL----- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L+E + +V+ A + V S+ + N+ G +LL E Sbjct: 54 DRLVVEKTLREHKITGVVHLAGKKQVGESVERPTYYYHENVEGLQVLLGEVA-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG D +E P P SPY TK + ++LV A G +GI Sbjct: 106 -AAGIRNFLFSSSASVYGMPDVDSVTETTPCAPLSPYGETKLAGEWLVRAAGKAHGISTA 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE L+P+ R G ++G DG +RD+++VE Sbjct: 165 CLRYFNVAGAA-TPELADTGVFNLVPMVFERYDAGQGARIFGDDYPTPDGTCIRDYIHVE 223 Query: 228 D----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D HV A + + G GE ++ N R V E+ LL A HT Sbjct: 224 DLADAHVVAARKLAEWGAQGEYKDLTVNIGRGEGVSVKEMVELLGA----HTGHTHAPVI 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 RPG + + KI +E+GW + ++ Sbjct: 280 TPRRPGDPAKVVASADKIAAELGWKARHDV 309 >gi|34496274|ref|NP_900489.1| nucleotide sugar epimerase [Chromobacterium violaceum ATCC 12472] gi|34102127|gb|AAQ58494.1| probable nucleotide sugar epimerase [Chromobacterium violaceum ATCC 12472] Length = 323 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 152/336 (45%), Gaps = 34/336 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++VTG AGFIG A+C L+ +QV+ ID L YA L L + + FSF + Sbjct: 3 KILVTGAAGFIGRAVCEKLLERRDVQVVGIDNLNDYYAVELKHARLATLQGRSNFSFHRQ 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + + D +++ AA++ V S+ + +N++G +LE R Sbjct: 63 DIADWPAMERLFSAEKFDYVIHLAAQAGVRYSLQNPHAYAESNLLGFTNVLEACR----- 117 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + L + + FSED + P S Y+ATK +++ + ++ H Y Sbjct: 118 -----RHPVKHLVFAGSSSVYGSGSAVPFSEDQRADHPVSFYAATKRANELMAASYSHLY 172 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V + Sbjct: 173 RLPTTSLRFFTVYGPWGRPDMAPWLFTDAILNGRPIKVFNHGKMQRDFTYIDDIVEGVVR 232 Query: 236 VLKKGRIGER----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 V++ GE +NIG + + + + + + Y E I+ E P D Sbjct: 233 VMEHVPSGELPHTIFNIGNHQPVELMTFI---------QLTEKYCGREAIK--EYLPMQD 281 Query: 292 RRYAI---DSSKIKSEIGWFPQENMESGLNKTVCWY 324 I ++S+++ +G+ P ++E G+ + V W+ Sbjct: 282 GDVPITYAETSRLRDAVGFTPSTSLEVGMARFVEWF 317 >gi|228984391|ref|ZP_04144570.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775360|gb|EEM23747.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 114 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y++ + +++ D LTY+GNLN++K I + F++ +I Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 + E + +KE IVNFAAESHVDRSI F TN+IGT LLE Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLE 110 >gi|312794574|ref|YP_004027497.1| gdp-mannose 4,6-dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181714|gb|ADQ41884.1| GDP-mannose 4,6-dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 362 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 146/338 (43%), Gaps = 34/338 (10%) Query: 2 RLIVTGGAGFIGSALCRYL------VNDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFS 53 R ++TG G G+ L +L V+ LK + +I+ +N L E Q+ F Sbjct: 3 RALITGITGQDGAYLAEFLLEKGYEVHGLKRRSSLIN----TQRINHLYEEPQTPGRRFY 58 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 D+ D + ++E QPD I N AA+SHV S + + +GT +LE R+ Sbjct: 59 LHYGDMTDSTNLIRVIQEVQPDEIYNLAAQSHVKVSFESPEYTANADALGTLRILEAIRI 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D+ RF Q ST E++G + E P+ P SPY+A K + ++ + + Sbjct: 119 LKLA------DKTRFYQASTSELFGKAAEVPQRETTPFYPRSPYAAAKVYAYWITVNYRE 172 Query: 174 TYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDH 229 YGI N+ P F + I A+ R+ G LY G+ +RDW Y +D+ Sbjct: 173 AYGIFASNGILFNHESPIRGETFVTRKITRAVARIKLGLQEKLYLGNLDAIRDWGYAKDY 232 Query: 230 VRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 VRA++++L GE +++ E+ + EI +L + K Sbjct: 233 VRAMWMILNHSEPDDFVIATGEGHSVREFVEKAFKVVDIEIEWLGRGVDEKGIDAKTGRV 292 Query: 283 FIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMES 315 +E P + R + DS+K + +GW P E Sbjct: 293 LVEIDPRYFRPTEVDILIGDSTKARKILGWEPTVTFEQ 330 >gi|171058078|ref|YP_001790427.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] gi|170775523|gb|ACB33662.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] Length = 325 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 32/332 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAG IGS L+ Q++++D L G+L +++ F+Q DIC Sbjct: 7 RILVTGGAGLIGSTTIDLLLRQHAPAQIVILDNLVR-GSLANVESALSDPRLRFVQGDIC 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII--GTFILLEETRLWWSCL 118 D E +R A DA+++ AA + + AD ++ G+F ++E R Sbjct: 66 DAETVRRATTGM--DAVIHLAA---LRITACAADARRAMQVMCDGSFNVVEAAR------ 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ +YG D ED PYN + Y A+K + L+ ++ + + Sbjct: 115 ---EAGVAKIVAASSASIYGMADSFPTREDHHPYNNRTWYGASKVMLEGLLRSYHAMHAL 171 Query: 178 PVLLSNCSNNYGPY-----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 P N YGP + E LI I R+ G + G GQ D++Y++D RA Sbjct: 172 PYTAMRYFNVYGPRMDLHGQYTEVLIRW-IDRIDAGLPPLILGSGQQTMDFVYIDDVARA 230 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L L+ E +N+ E + + ++ + +P Y L+ + R Sbjct: 231 NVLALRSDADDEVFNVASGVETSLNQLAAALLDVMGSKLPVEYGPERLVNAVP------R 284 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R A D+ + +G+ Q + GL + V W+ Sbjct: 285 RLA-DTDRAARRLGFRSQVGLAEGLARLVDWW 315 >gi|320103808|ref|YP_004179399.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319751090|gb|ADV62850.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 309 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 150/332 (45%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGGAGFIGS LC + D +V+ +D L GNL +++ + F FL +I Sbjct: 1 MRTVITGGAGFIGSHLCERFLQDG--EVICVDNL-LTGNLRNIEHLKSHPKFHFLDHNIS 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I + D +++FA+ + + + +GT + L Sbjct: 58 KPLEIDGPI-----DNVLHFASPASPADYLKHPIPTLKVGSLGT----------HNALGL 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + RFL ST EVYG + ED P P Y K ++ + +A+ + Sbjct: 103 AMAKKARFLLASTSEVYGDPEVHPQREDYWGNVNPIGPRGCYDEAKRFAEAITMAYHRHH 162 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP +++P +++ + + ++G+G+ R + YV+D V + Sbjct: 163 GVNTHIVRIFNTYGPRMRLNDGRVLPAFMSQALRNEPITVFGEGRQTRSFCYVDDLVDGI 222 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 + +L E N+G +E V+E+ + AL+P S E+I +D P D + Sbjct: 223 HRLLFCD-YHEPVNLGNPSE----ITVYELAKEIIALVPGCTS--EIIH--KDLPQDDPK 273 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D S + +GW PQ + GL +T+ ++ Sbjct: 274 RRRPDISLARRLLGWEPQVDRAVGLQRTLDYF 305 >gi|89255995|ref|YP_513357.1| NAD dependent epimerase [Francisella tularensis subsp. holarctica LVS] gi|290953235|ref|ZP_06557856.1| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. holarctica URFT1] gi|295313548|ref|ZP_06804138.1| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. holarctica URFT1] gi|89143826|emb|CAJ79037.1| NAD dependent epimerase [Francisella tularensis subsp. holarctica LVS] Length = 323 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 151/331 (45%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 14 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 72 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 121 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 181 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 240 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 241 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 293 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 323 >gi|268609613|ref|ZP_06143340.1| NAD-dependent epimerase/dehydratase [Ruminococcus flavefaciens FD-1] Length = 313 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 98/350 (28%), Positives = 153/350 (43%), Gaps = 50/350 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+ ++ G AGF+G L + L + ++ + L +K +++L Sbjct: 1 MKALIIGAAGFVGGYLIKELASAGWEVHVSCLPSEKTEGECTVHTL-------------- 46 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D + +++ E QPD + + AA+S V S N+IGT +LE R Sbjct: 47 DILDGDGVKAIFDEIQPDIVYHLAAQSSVALSWKKPQLTAEVNVIGTINVLEAAR----- 101 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 KKD R + I + E YG + D SED P + Y+ATKA L + Y Sbjct: 102 -DAVKKD-MRIVLIGSGEEYGYIRQDACPLSEDEVLRPGNVYAATKACQGMLGEIYARAY 159 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-----VFLYGDGQNVRDWLYVEDHV 230 + +++ N+ GP +I + E V G+ + +RD+ V D V Sbjct: 160 KMDIVMVRAFNHSGPAQAEIFVISDFCKQAAEIEKGMREPVISVGNLEAMRDFTDVRDVV 219 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPG 289 RA L+ +KGR G+ YN+G K I ++LD +I SY+ T + +R E R Sbjct: 220 RAYRLLGEKGRSGQVYNVGRGRAVK-------IQYILDTII--SYAETNITVRRDEKRMR 270 Query: 290 HDRRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I D SKI ++ GW + +E + T LD +WR KE Sbjct: 271 ASDIPIIEPDVSKIYADTGWKAEITVEDTIKDT----LD---YWRTKIKE 313 >gi|78211743|ref|YP_380522.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9605] gi|78196202|gb|ABB33967.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9605] Length = 339 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 89/359 (24%), Positives = 153/359 (42%), Gaps = 62/359 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+AL + L+ +V+ +D L L ++ I+ + + F Sbjct: 5 VLVTGAAGFIGAALSKRLLQRGD-RVVGLDNLNDYYDPGLKQSRLRQVEAIAPAGAWRFE 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ + D + + + E +P +VN AA++ V S+ +I +N++G LLE R Sbjct: 64 RLALEDDQGLMALFVEERPQVVVNLAAQAGVRYSLENPAAYIQSNLVGFGNLLEGCRYHG 123 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 124 TQ---------NLVYASSSSVYGGNRNLPFHERQPVNHPVSLYAASKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V + Sbjct: 175 YGLPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGKMQRDFTYIDDIVEGV 233 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDI----------VFEIGFLLDALIPKSYSHTELIRF 283 K N E + VF IG + TEL+RF Sbjct: 234 LRCCDKPAT-------SNPEFDPLQPDPATAAAPHRVFNIG---------NSQPTELLRF 277 Query: 284 IED----------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 IE +PG A D+S ++ I + P ++E G+ + WY + Sbjct: 278 IEVMEQALGREAIKDFQPIQPGDVIATAADTSALEKWINFTPSTSIEDGIQRFANWYFE 336 >gi|315038810|ref|YP_004032378.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325957251|ref|YP_004292663.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|312276943|gb|ADQ59583.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325333816|gb|ADZ07724.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|327183973|gb|AEA32420.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1118] Length = 330 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 155/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVAGMISLLKAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P NP +PY TK + ++AW GI Sbjct: 106 DAGTKYLVFS-SSAATYGIPKKLPITEDTPLNPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGASSDGTIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYNTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK K + +N+G + N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMKINKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K ++ +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKHENVDDVIATAWKWH 320 >gi|119897143|ref|YP_932356.1| putative nucleotide sugar epimerase [Azoarcus sp. BH72] gi|119669556|emb|CAL93469.1| putative nucleotide sugar epimerase [Azoarcus sp. BH72] Length = 335 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L+ +V+ +D L Y L + L ++ ++ F F++ Sbjct: 1 MKILVTGAAGFIGMHTSERLLARGD-EVVGLDNLNDYYDPRLKEDRLARLTPNDGFRFVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + + D +++ AA++ V S+ +I +N++G +LE R Sbjct: 60 MDVADRAGMEALFAAEKFDRVIHLAAQAGVRYSLQNPHAYIDSNLVGFTNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG + FSE D +P S Y+ATK +++ + + H Y Sbjct: 116 ----HSKVQ-HLVYASSSSVYGGNTRMPFSEHDSVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++EG + ++ G+ RD+ Y++D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRAIDVFNHGRMKRDFTYIDDIVEGVLR 230 Query: 236 VLK-----------------KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L +G+ R +NIG NN E+ ++A I + Sbjct: 231 TLDRVAEPDPAFDSDHPDPGRGKAPYRVFNIGNNNP-------VELMAFIEA-IEGALGR 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T F+ + G ++ ++ + G+ P ++ G+ + V WY Sbjct: 283 TAEKNFLPLQDGDVPATYANTDELNAWTGFAPATSVSDGVGRFVAWY 329 >gi|156744185|ref|YP_001434314.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156235513|gb|ABU60296.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 17/266 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNL---FSFLQ 56 MR ++TGGAGFIGS L L+ QV+ ID Y + + I+++ ++ ++ Sbjct: 1 MRYLITGGAGFIGSHLSEALLARGD-QVVCIDNFNDYYDPVRKRRNIARALAHPGYTLVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D D E + +++P + + A + S+ + N+ GT +LE Sbjct: 60 ADFRDAEIMDRVFAQYRPQRVAHIGAMAGPRPSMRNPALYEEVNVRGTLTILE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + + + ST VYG + +SE+ P + P S Y+ATK +++ L Y Sbjct: 113 --TAARYEVEGLVLASTSSVYG-MSPTPWSEESPTDRPLSYYAATKKAAEVLAYTAHRQY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALY 234 G+P+ + YGP P+ L + M+ G + L+ G V RDW YV+D V + Sbjct: 170 GMPIRIVRFFTVYGPRGRPDMTPHLFVDAMVAGKSITLFNGGMGVYRDWTYVDDIVSGVV 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV 260 L G + +N+G ++ + ID V Sbjct: 230 AALDAGYAFDIFNLGHSSPVQLIDFV 255 >gi|313896782|ref|ZP_07830330.1| NAD dependent epimerase/dehydratase family protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974699|gb|EFR40166.1| NAD dependent epimerase/dehydratase family protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 328 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 33/334 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS LC +++ + V V+D L+ Y N+ L+ + F ++ DI Sbjct: 18 FLVTGGAGFIGSNLCEAVLS-MGHCVRVLDNLSTGYEKNIAGLRTHEK---FEMIEGDIK 73 Query: 61 D-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D C R+ D +++ AA V SI + TNI+GT +++ + + Sbjct: 74 DFSTCTRACAG---ADYVLHQAAAVSVPESIEQPIAYTETNIMGTVNMMQA-----AAAA 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK F+ S+ VYG ED+ S Y+ TK ++ + + YG+ Sbjct: 126 HVKK----FVYASSSAVYGDDQTMPKREDIVGRRLSTYAVTKYVAEEYAVQYTMHYGLDC 181 Query: 180 LLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--L 233 N YG P +IP + ++ + GDG+ RD++YVED V+A L Sbjct: 182 YGMRYFNVYGRRQDPNGAYAAVIPKFVEALLHDRPPIVNGDGEQSRDFVYVEDVVQANLL 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 GE YNI + R +++ ++ + L L+ K + + +R G R Sbjct: 242 ACAAPHEAAGEAYNI-ASGTRSSLNEMYAV---LKELLGKDLTPV----YGPERAGDIRH 293 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +K + ++G+ P + + G+ + + WY +N Sbjct: 294 SGADITKAREKLGYAPAYDFKRGVTEAIAWYREN 327 >gi|313674712|ref|YP_004052708.1| nad-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] gi|312941410|gb|ADR20600.1| NAD-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] Length = 354 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 154/363 (42%), Gaps = 56/363 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSL---KEISQSNL 51 +++VTG AGFIG L + L+ + QV+ D + G LN L +E+ +++ Sbjct: 3 KILVTGSAGFIGYHLTKALL-ERGDQVIGYDNINDYYDVNLKYGRLNELGIKRELVKNHQ 61 Query: 52 ---------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 F F++ D+CDR+ + +E Q D ++N AA++ V S+ +I NI Sbjct: 62 LVLSEQYPNFRFVKADLCDRDYLYQLFEEEQFDHVINLAAQAGVRYSVENPQAYIDANIQ 121 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G +LE R + + S+ VYGS + FS +P S Y+ATK Sbjct: 122 GFLNILEACRHYPVK---------HLVYASSSSVYGSNTQMPFSVHHHTDHPLSLYAATK 172 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H + I YG + P+ + L + +G + ++ G+ R Sbjct: 173 KSNEMMAHTYSHLFNIATTGIRFFTVYGSWGRPDMALFLFAEAIRKGEKIKVFNQGEMER 232 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ YV D V+ + L + YNIG N K +D + Sbjct: 233 DFTYVGDIVKGVMAALDQPATSNAAFDTNIPDAGSSNAPYRLYNIGNNQPVKLLDYI--- 289 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K+ T F+ +PG ++ D + ++ + P +E G+ + V W Sbjct: 290 -----KALEKAMGKTAEKEFLPMQPGDVQKTYADVQDLINDFNYQPNTPLEKGIEEFVSW 344 Query: 324 YLD 326 +++ Sbjct: 345 FIE 347 >gi|301165726|emb|CBW25298.1| DNTP-hexose dehydratase-epimerase [Bacteriovorax marinus SJ] Length = 339 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GF+GS L ++ ++++ D L G +L+ + F F + DI Sbjct: 1 MKYLITGGCGFLGSNLAAEVLKRGD-ELVIFDNLYRHGTEKNLEWLRSLGEFKFYRNDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+ ++ +K +PD I + A + + S+ N+ GTF LLE R Sbjct: 60 NRDDVQFCIKSEKPDVIFHVAGQVAMTTSLERPRFDFDINVGGTFNLLEAVR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLD-----------------KGLFSEDMPYNPSSPYSATKAS 163 D + ST++VYG L+ KGL E + + ++PY +K + Sbjct: 112 DHCPNASIVYSSTNKVYGDLEHLEYHESDTRYSIPKFPKGL-PESIGLDFTTPYGCSKGA 170 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSH------VFLY 214 +D + W +G+ ++ S+ +G F + I ++R +E + Sbjct: 171 ADQYMKDWAKCFGLKTVVFRHSSIFGGRQFSTFDQGWIGWFVSRAVETQRGNLKEPFTIQ 230 Query: 215 GDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G+G+ VRD L+ ED V+ + ++ + G+ +NIGG + N + E+ L+ + Sbjct: 231 GNGKQVRDVLFSEDIVKCYWAAVENIEKTKGQSFNIGGGMD--NSLSILELFAHLENEMG 288 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + EL R + + D +K K GW P+ GL K + W Sbjct: 289 IKLDYKELA----PRESDQKMFVADIAKAKEYFGWEPKVKTAEGLRKMIEW 335 >gi|197105551|ref|YP_002130928.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum HLK1] gi|196478971|gb|ACG78499.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum HLK1] Length = 373 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 47/350 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 MR +VTGGAGFIG+ L L ++ +V+V D L G NL LK + S +Q Sbjct: 26 MRALVTGGAGFIGANLADRLASE-GCEVVVFDALARPGVERNLAWLKARHGRKITS-VQA 83 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + A ++ Q I + AA+ V S++ + N+ G +LE R Sbjct: 84 DVRDARAVAEAARDVQ--VIFHLAAQVAVTTSLVQPMDDFEINVRGALNVLEAAR----- 136 Query: 118 LSQDKKDQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYS 158 + + + ST++VYG L D L SE P + +PY Sbjct: 137 -----RRRTPVIFASTNKVYGDLADVPLELAGEAYRPKDADLRARGVSEARPLDFHTPYG 191 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYG 215 +K ++D VL + ++ +P + S YGP + + + R +EG + +YG Sbjct: 192 CSKGAADQYVLDYARSFDLPTCVLRMSCIYGPRQMGTEDQGWVAHFLIRALEGQPIVVYG 251 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 DG+ VRD ++V D V A ++ G +N+GG + ++ +G++ + + K Sbjct: 252 DGRQVRDIMHVGDTVDAYMAAWRRIEEVAGRAFNLGGGPG-NAVSLLQLLGYIEEVIGRK 310 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + F + R G R Y D S K + + +G+ W Sbjct: 311 VE-----VGFSDWRAGDQRYYVSDPSAAKQALQLADPRDWRAGVADLARW 355 >gi|58337735|ref|YP_194320.1| udp-glucose 4-epimerase [Lactobacillus acidophilus NCFM] gi|227904385|ref|ZP_04022190.1| udp-glucose 4-epimerase [Lactobacillus acidophilus ATCC 4796] gi|58255052|gb|AAV43289.1| udp-glucose 4-epimerase [Lactobacillus acidophilus NCFM] gi|227867858|gb|EEJ75279.1| udp-glucose 4-epimerase [Lactobacillus acidophilus ATCC 4796] Length = 330 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGN-DVVVLDSL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ + Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLK---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 + D + S+ YG K +ED P +P +PY TK + ++AW GI Sbjct: 105 NDADVKYLVFSSSAATYGIPKKLPITEDTPLDPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGASSDGTIGEDHGPETHLIPNILKSAISGDGKFTIFGDDYNTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK K + +N+G N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMKTNKSDVFNLGTAQGYSNLEILESAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K ++ +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKHENVDEVIETAWKWH 320 >gi|134301497|ref|YP_001121465.1| NAD-dependent epimerase/dehydratase family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|187932109|ref|YP_001892094.1| NAD dependent epimerase [Francisella tularensis subsp. mediasiatica FSC147] gi|134049274|gb|ABO46345.1| NAD dependent epimerase/dehydratase family [Francisella tularensis subsp. tularensis WY96-3418] gi|187713018|gb|ACD31315.1| NAD dependent epimerase [Francisella tularensis subsp. mediasiatica FSC147] Length = 323 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 151/331 (45%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 14 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 72 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 121 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 181 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 240 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 241 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 293 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 323 >gi|167763490|ref|ZP_02435617.1| hypothetical protein BACSTE_01864 [Bacteroides stercoris ATCC 43183] gi|167698784|gb|EDS15363.1| hypothetical protein BACSTE_01864 [Bacteroides stercoris ATCC 43183] Length = 350 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 88/362 (24%), Positives = 160/362 (44%), Gaps = 56/362 (15%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIGS + ++L +ND L +L G N+ K Sbjct: 1 MKILVTGAAGFIGSYVSKHLLAYGNEVIGLDNINDYYDINLKYGRLAELGIEKENIGWYK 60 Query: 45 EISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 S + F F+++++ D + ++ + + N AA++ V SI +I +N+ Sbjct: 61 FTSSTTFSNFRFIRMNLEDTQAMQMLFANEGFECVCNLAAQAGVRYSIQNPYAYIESNVD 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSAT 160 G +LE R ++ R F+ S+ VYG K FSED +P S Y+A+ Sbjct: 121 GFLNVLEGCR----------HNKVRHFVYASSSSVYGLNGKVPFSEDDSIAHPVSLYAAS 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ H Y IP YGP+ P+ L ++ + ++ +G + Sbjct: 171 KKSNELMAHAYSHLYNIPSTGLRFFTVYGPWGRPDMSPFLFADAILNHRPIKVFNNGDML 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ Y++D V + V+ + YNIG + K +D + Sbjct: 231 RDFTYIDDIVEGVLKVITHIPTADATWNPESPSPASSSAPYKIYNIGNSQPVKLMDFIQA 290 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 I + K Y + +PG + D+S++++E+G+ P +++ G+ +T+ Sbjct: 291 IENAIGEEADKIY--------LPMQPGDVYQTYADTSRLENELGFKPHKDLNEGVKETIS 342 Query: 323 WY 324 WY Sbjct: 343 WY 344 >gi|331269303|ref|YP_004395795.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] gi|329125853|gb|AEB75798.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] Length = 331 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 157/334 (47%), Gaps = 18/334 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTG GFIGS L LV I LV + G +++ + + N+ + D+ Sbjct: 7 KVLVTGAEGFIGSHLIERLVELGADITALVQYNSFNNWGWIDTFDKNVKDNI-KVITGDV 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + ++ + + +++ AA + S L ++ TN+ GT +LE R Sbjct: 66 REYDNVKRMVS--GQEVVMHLAALIAIPYSYLSPMAYVRTNVEGTTNILEACR------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++++ + + ST E YG+ E P SPYSA+K +D + ++ ++ +P+ Sbjct: 117 -EEENIEKIVHTSTSETYGTALYVPIDEKHPMQGQSPYSASKIGADKMAESFYRSFNLPI 175 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N YGP +IP I++++ G G RD+ YV+D A + + Sbjct: 176 ATIRPFNTYGPRQSARAVIPTIISQVLAGKREIKLGSLTPTRDFNYVKDTAEAFVKIAES 235 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + IGE N G N E + I L+ + K + E IR ++ +R +A ++ Sbjct: 236 DKTIGEVINAGSNYEITIGETAKRIIELIGHDV-KIFCDEERIR--PEKSEVNRLWA-NN 291 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +KIK+ W P+ +++ GL +T+ W +N +++ Sbjct: 292 TKIKNLTDWTPKYSIDEGLRETIEWIKNNMQYFK 325 >gi|120602752|ref|YP_967152.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris DP4] gi|120562981|gb|ABM28725.1| UDP-galactose 4-epimerase [Desulfovibrio vulgaris DP4] Length = 331 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 92/359 (25%), Positives = 161/359 (44%), Gaps = 63/359 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + R LV + + + D L+ G+ S+ ++ ++ D+ DR Sbjct: 10 VLVCGGAGYIGSHMVRALVEHGYVPI-IFDNLS-TGHAESVGDVD------LVRGDLLDR 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R E DA+++F+A+S V S+ + N++GT LLE R + Sbjct: 62 QALRRLFAEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVGTINLLEAMR---------E 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 R + S+ V+G+ +ED P P +PY +K + + + + YG+ + Sbjct: 113 AGVSRLVFSSSAAVFGNPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYANAYGMRSVSL 172 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ + + G H PE LIP + + G + ++G DG VRD+++V Sbjct: 173 RYFNAAGADEAGDIGESHKPETHLIPNVLRAALGTGPELKIFGDDYDTPDGTCVRDYIHV 232 Query: 227 ED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA---LIPKSYSHT 278 D H+RAL Y+ LK G +N+G N F + +++A + + H+ Sbjct: 233 ADLCDAHLRALSYMQLKPG--AHAFNLGNGNG-------FSVKQVVEAAWRVTGRDVPHS 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW--RPLY 335 R RPG DS+ E+GW P + +D+ W W +P Y Sbjct: 284 MAPR----RPGDPAWLVADSTLAGRELGWKPSFT-------DIDAIIDSAWRWHQKPRY 331 >gi|300865144|ref|ZP_07109968.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506] gi|300336834|emb|CBN55118.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506] Length = 334 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 135/335 (40%), Gaps = 38/335 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIGS LC L+ L V +D L NL K N F+FL+ D Sbjct: 8 LVTGAAGFIGSHLCDRLLA-LGHAVTGLDSLITGRLVNLERAKTYKTYNTFNFLEQDAA- 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 S L+ D + + A + + SI ++ N+ T+ LL+ R Sbjct: 66 -AITPSTLEGI--DWVFHLAGLADLVPSIQNPGKYYHANVHSTYALLDACR--------- 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 RF+ ++ YG + E P +P PY+ TK + LVL W Y +P L Sbjct: 114 HAPIQRFIYTASSTCYGIPHQYPTPESYPCSPEHPYALTKYLGEQLVLHWAKVYKLPALS 173 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP + + + + + G + GDG RD+ +V D V A Sbjct: 174 LRLFNVYGPRSRTTGAYGAVFGVFLAQKLAGKPFTVVGDGSQTRDFTFVSDVVEAFIKAA 233 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + +GE NI + + +V L+ +H I RPG D Sbjct: 234 ESDMMGEIINICSGQPQSVLTLV--------KLLEGPITH------IPKRPGEPDCTWGD 279 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +K K+ +GW PQ + G+++ L N WR Sbjct: 280 IAKAKTLLGWQPQVSFPEGVSQM----LANINMWR 310 >gi|222148124|ref|YP_002549081.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4] gi|221735112|gb|ACM36075.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4] Length = 324 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 45/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS C+ L + +V D L + G+ +S+K F Q DI D Sbjct: 4 ILVVGGAGYIGSHACKAL-SKAGYTPVVYDNLVH-GHADSVK------WGPFEQGDIADG 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L ++QP+ +++FAA + V S+ ++ NI G+ LL+ R ++ Sbjct: 56 ARLDAVLSQYQPECVMHFAAFAAVGESVTDPAKYYNNNIHGSVCLLDAMR-------RNG 108 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D F ST YG + E+ P +P +PY +K + + +GH YG+ + Sbjct: 109 VDTIVF--SSTCATYGEVKSLPIVEEAPQSPVNPYGFSKLVIEQALKDYGHAYGLKWVAM 166 Query: 183 NCSN--------NYGPYHFPE-KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N + G H PE IPLA+ + + ++G DG VRD+++V Sbjct: 167 RYFNAAGLDPEGDLGERHDPETHAIPLAVLAAMRQTEFNVFGTDYDTPDGTAVRDYIHVC 226 Query: 228 D----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D HV A+ + K G G +N+ D++ + + A +P I++ Sbjct: 227 DLADAHVLAIDYLQKGGESGA-FNLATGKGTSVKDLLEAVSEAVGAQVP--------IKY 277 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G K +S +GW P+ Sbjct: 278 APRRAGDAPALYASGDKARSLLGWTPR 304 >gi|27804853|gb|AAO22891.1| nucleotide sugar dehydratase [Myxococcus xanthus] Length = 279 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 25/244 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ V GGAGF+GS LC L++D V+ +D L GN +L+ ++ FSF++ DI + Sbjct: 5 RVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLI-TGNEENLRTLNGRPGFSFVKADITE 63 Query: 62 RECIRSALKEFQPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R + L D + N A+ S +D + L E + IGT + L Sbjct: 64 RIPVEGPL-----DYVFNMASPASPIDYAQLPL-ETLRVGSIGT----------ENGLKL 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + ++ FL ST EVYG ED P P S Y K S+ + A+G T Sbjct: 108 AEANKAVFLMASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAITAAYGRTK 167 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V + N YGP +++P + + ++G ++GDG R + YV+D V L Sbjct: 168 GVQVRIVRIFNTYGPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGL 227 Query: 234 YLVL 237 ++ Sbjct: 228 VRLM 231 >gi|113476132|ref|YP_722193.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum IMS101] gi|110167180|gb|ABG51720.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum IMS101] Length = 316 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 20/323 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNLFSFLQVDICDR 62 IVTG GFIGS L L+N +V+ ID+ Y + ISQ Q+ D Sbjct: 5 IVTGVGGFIGSHLAETLLNQDN-KVIGIDEFNNYYNPTLKRQNISQFQDHPAFQLIENDI 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGAD-EFITTNIIGTFILLEETRLWWSCLSQD 121 + + + D I + AA++ V S G ++ NI T I+LE + D Sbjct: 64 QSLNWSELLVDVDIIYHQAAQAGVRASWGGGFFDYTERNIDATQIILEAAK--------D 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + S+ VYG+ + E + P SPY TK +++ L + H +G+P + Sbjct: 116 APNLKRLVYASSSSVYGNAETFPTPETVCPQPVSPYGITKLAAEQLGKLYHHNFGVPCVY 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKG 240 YGP P+ +++ + +YGD Q RD+ ++ D V A L Sbjct: 176 LRYFTVYGPRQRPDMAFHKFFKWILQDEPISIYGDAQQTRDFTFISDAVAANLLAATVPL 235 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +GE +NIGG + ++ E+ +++ ++ + F+E G R + D SK Sbjct: 236 AVGEVFNIGGGSRV----VLAEVINIMEQIVGRPIKKN----FVEKARGDARHTSADVSK 287 Query: 301 IKSEIGWFPQENMESGLNKTVCW 323 + +G+ PQ ++ GL + W Sbjct: 288 AQKILGYQPQISLAEGLKREWEW 310 >gi|197105532|ref|YP_002130909.1| UDP-glucose 4-epimerase [Phenylobacterium zucineum HLK1] gi|196478952|gb|ACG78480.1| UDP-glucose 4-epimerase [Phenylobacterium zucineum HLK1] Length = 348 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 54/356 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IG+ + L ++ +V D L+ + +E Q +F+ DI D Sbjct: 9 VLVTGGAGYIGAHTAKAL-SERGFFPVVFDSLS-----SGFREAVQWG--AFVHGDIRDT 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+ + ++++FA V RS+ D F N+ GT LL R + Sbjct: 61 RALAEAISDHGVKSVIHFAGLIEVGRSVAQPDIFWEINVGGTVSLLTAMR---------E 111 Query: 123 KDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + S+ VYG +G E P+SPY TK + ++++ A YG+ Sbjct: 112 RGVERLVFSSSAAVYGQGGRGPLETIPESAGKAPASPYGDTKLACEWMIEAQCRAYGLTA 171 Query: 180 LL--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 + ++ S G H PE L+PLAI + EG + ++G DG +RD+ Sbjct: 172 VALRYFNAAGADPSGRIGEAHEPETHLLPLAIAAGLGEGKPLTVFGEDFDTPDGTCLRDY 231 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D HV AL + L G E N+G ++V +G L +P S Sbjct: 232 IHVNDLAAAHVAALEVDLPAGAY-EAVNVGTGQGHSVREVVEAVGRALGRPVPHSIG--- 287 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 R G D+S+ + +GW P + S L++ V L W +P Y Sbjct: 288 -----ARRAGDPPSLVADASRARDLLGWEP---VCSTLDRIVADAL--RWEAQPAY 333 >gi|257469392|ref|ZP_05633485.1| NAD-dependent epimerase/dehydratase [Fusobacterium ulcerans ATCC 49185] Length = 345 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 101/363 (27%), Positives = 159/363 (43%), Gaps = 53/363 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL-----NSLKEISQ-SNLFSF 54 M+++VTG AGFIGS L L+ + K +V VID +L N L+ +++ L S Sbjct: 1 MKILVTGAAGFIGSHLIEELLKE-KHKVRVIDNFNEYYSLDIKCRNVLESVNKREKLPSI 59 Query: 55 LQV------------------------DICDRECIRSALKEFQPDAIVNFAAESHVDRSI 90 L++ DI D E I ++ +PD ++N A V S+ Sbjct: 60 LKLKDREEKIAQLVKETASEEYKLYYSDIRDNEKIEEIFEKEKPDFVINLAGLGGVRPSL 119 Query: 91 LGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DM 149 E+ N+ GT LLE SC + K +F+Q S+ VYG+ K F E D+ Sbjct: 120 EKPLEYEAVNVRGTMNLLE------SCKNLGIK---KFIQASSSSVYGNNKKAPFKETDI 170 Query: 150 PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS 209 SPY+ATK S + + + YGI + YG P+ I ++EG Sbjct: 171 VDFAISPYAATKKSCEVMGHVYHKLYGIDMFQLRFFTVYGERQRPDLAIYKFTKMIMEGR 230 Query: 210 HVFLYGDGQNVRDWLYVEDHVRALYLVL----KKGRIGERYNIGGNNERKNIDIVFEIGF 265 + YG+G RD+ Y++D V+ + + I E N+G +N ++V I Sbjct: 231 EIPFYGEGNTFRDYTYIKDIVQGIKKSIDYLENNSNIYEILNLGESNTVSLKEMVTTIEN 290 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +L+ ++ + D+ YA D K + IG+ P E G+ K V W+ Sbjct: 291 VLEI-------KAKINKLPIQMGDVDKTYA-DIRKARELIGYNPTTEFEDGIRKFVKWFK 342 Query: 326 DNN 328 +NN Sbjct: 343 ENN 345 >gi|221633720|ref|YP_002522946.1| UDP-glucose 4-epimerase [Thermomicrobium roseum DSM 5159] gi|221157120|gb|ACM06247.1| UDP-glucose 4-epimerase [Thermomicrobium roseum DSM 5159] Length = 329 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 54/347 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 + ++VTGGAG++GS R L +V+V D +L++ +S + L V ++ Sbjct: 5 LTVLVTGGAGYVGSFTVRAL-QQAGHEVVVFD---------NLRQGHRSAVCVPLVVGEL 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + + + ++ DA+++ AA + V S+ ++++ N+ GT +LLE +CL Sbjct: 55 IDREAVATCFRRWRFDAVIHLAAYTSVRESVTDPNKYVVHNVGGTIVLLE------ACLR 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + S+ EVYG E P P++PY ATK ++ + + YG+ Sbjct: 109 HDVP---YLVFSSSSEVYGEARYLPLDEAHPTEPTNPYGATKLQVEHYLRWYDAAYGLRS 165 Query: 180 LL--------SNCSNNYGPYHFPEK-LIPLAITRMIE------GSHVFLYGDGQNVRDWL 224 + + + G H PE+ LIP AI + S V DG +RD++ Sbjct: 166 ISLRYFNAAGAALDGSMGEDHRPEEHLIPNAIRGALGLQAFRLTSPVVATPDGTTIRDYV 225 Query: 225 YV----EDHVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSH 277 +V E HV AL L++G + N+G G + R+ I++V E L P Sbjct: 226 HVLDLAEAHVLALE-ALRQGHPTDVINLGSGVGYSTRQIIELVQE---LTGVRFP----- 276 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + E RPG +K + +GW P+ +E + V W+ Sbjct: 277 ---VERGEARPGEPPIKYASYAKAERVLGWRPRYGIEEIIASAVRWH 320 >gi|121534554|ref|ZP_01666376.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] gi|121306806|gb|EAX47726.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] Length = 306 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 28/325 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + Q +V+D L+ AG L ++ ++ F+Q D+ Sbjct: 1 MKVLVTGGAGFIGSHIVDRLI-EAGFQTVVLDNLS-AGCLANVNPAAR-----FMQKDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + L+ D +V+ AA++ V +S+ NI+G +LE +C S Sbjct: 54 DRD-LADLLRAEPFDFVVHQAAQTTVPKSLTDPYYDCDVNIMGLVNVLE------ACRSS 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + S+ VYG SE+ P+S Y +K ++ + + +G+ + Sbjct: 107 GVK---RIVFASSAAVYGDPADLPLSEEADKQPTSFYGLSKLVAEKYLELYYKNFGLEYV 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YG +I + +T+ + + ++GDG RD++YV D A Y L Sbjct: 164 ALRYANVYGERQTDSGEGGVISIFLTKALVDEPLTVFGDGTQTRDFIYVRDVAEANYRAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 YNI E V E+ L+ L+ K + ++ R G R ++ Sbjct: 224 FTANANRSYNISTGQEIS----VNELIGLMQQLVEKPL----ITQYAPPRAGDIYRSVLN 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVC 322 ++ ++ +GW P ++ GL +T+ Sbjct: 276 NAAARAMLGWQPNYSLAEGLGRTLA 300 >gi|239905942|ref|YP_002952681.1| UDP-glucose 4-epimerase [Desulfovibrio magneticus RS-1] gi|239795806|dbj|BAH74795.1| UDP-glucose 4-epimerase [Desulfovibrio magneticus RS-1] Length = 337 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 50/330 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + D + Y + N ++ DI +R Sbjct: 5 ILVTGGAGYIGSHTCKALAA-AGFTPITYDNMVYGHDW-------AVNWGPLVRGDILNR 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + EF+P A+++FAA ++V S+ +++ N+ G+ LL R K Sbjct: 57 GELDEVFAEFKPVAVLHFAAFAYVGESVTDPEKYYRNNVAGSLSLLSAMR---------K 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YG+ ++ +ED P P SPY +K + ++ + YG+ Sbjct: 108 AGCRHIVFSSTCATYGAPERVPLTEDHPTRPMSPYGTSKLMIEQMLKDFDAAYGMTYTAL 167 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEG-SHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL I + V ++G DG VRD+++V Sbjct: 168 RYFNAAGADPDGQIGEDHDPETHLIPLVIAAALGRIPRVEVFGTDYPTPDGTAVRDYIHV 227 Query: 227 EDHVRALYLVLKK---GRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 D A L +K+ G YN+G GN+ R+ I V E+ K E Sbjct: 228 ADLADAHILAVKRLLDGGKSAIYNLGTGTGNSVREVIRTVEEVSG-------KPVPMVEG 280 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R D PG YA DS I E+GW P+ Sbjct: 281 PRRAGDSPG---LYA-DSGAIIRELGWNPR 306 >gi|206602091|gb|EDZ38573.1| UDP-glucose 4-epimerase [Leptospirillum sp. Group II '5-way CG'] Length = 323 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 42/329 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + R L+ + + +++D L++ KE++ + DI D Sbjct: 2 ILVTGGAGYIGSHMVRVLIEN-GFETVILDNLSHG-----TKEVAVQTGAPLVVGDIRDP 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S + +A+++FAA V S+ ++ N+ GT +LE R + Sbjct: 56 RALTSLFSHYPIEAVIHFAAAIEVGESVQDPLKYWDNNLNGTLRILETMRSFGVR----- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST VY G +E+ +P +PY TKA+++ LV A H +G+ ++ Sbjct: 111 ----NLILSSTAAVYSPKSDGPITEEDRIDPQNPYGETKAAAERLVEACRHAFGVSSVIF 166 Query: 182 -----SNCSNNYG--PYHFPEK-LIPL---AITRMIEGSHVF----LYGDGQNVRDWLYV 226 + +YG + P LIP AI I VF DG VRD+++V Sbjct: 167 RYFNAAALEPSYGLVSHAIPRSHLIPAVLDAIAGRIPSLRVFGNDYPTPDGTGVRDYIHV 226 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A + LK KG I +N+G +D++ + +P R Sbjct: 227 MDLAEAHLVALKRLLKGEISGTFNLGTGQGHSVLDVIRTAEKVTGKKVP--------YRI 278 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 RPG ++ + + WFP + Sbjct: 279 EARRPGDVSMLVASGTRARQTLPWFPSRS 307 >gi|291617645|ref|YP_003520387.1| RfbB [Pantoea ananatis LMG 20103] gi|291152675|gb|ADD77259.1| RfbB [Pantoea ananatis LMG 20103] Length = 341 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG + + L+ QV+ +D L Y NL L I + F+F++ Sbjct: 7 MNFLVTGAAGFIGFHVSQRLLA-AGHQVVGLDNLNDYYDVNLKQARLDIIGDNPSFTFIK 65 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ DR+ I + ++ +++ AA++ V S+ + N+IG +LE R Sbjct: 66 ANLADRQAIATLFEQHNFQRVIHLAAQAGVRYSLENPHAYADANVIGHLNILEGCR---- 121 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG +K FS ED +P S Y+ATK +++ + + H Y Sbjct: 122 ---HHKIEHL--LYASSSSVYGLNNKMPFSTEDSVDHPVSLYAATKKANELMSHTYSHLY 176 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y GQ RD+ Y++D A+ Sbjct: 177 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYNQGQMKRDFTYIDDVAEAVIR 236 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YN+G + + + ++ I + AL K+ + Sbjct: 237 LQDVIPQADADWTVETGSAASSSAPYRIYNLGNS---QPVSLIHYIEAIEKALGVKANKN 293 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D++ + + IG+ PQ ++ G+ + V WY Sbjct: 294 -----LMPMQPGDVLATSADTTALFNTIGFKPQTGIDEGVRRFVDWY 335 >gi|78049577|ref|YP_365752.1| nucleotide sugar epimerase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325924904|ref|ZP_08186336.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas perforans 91-118] gi|78038007|emb|CAJ25752.1| nucleotide sugar epimerase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544691|gb|EGD16042.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas perforans 91-118] Length = 321 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGET-VVGLDNYNSYYDPQLKHDRVAALCPGIDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDREGLAALFDEIQPTRVVHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 L---KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ +D + + E + + +PG Sbjct: 230 LDTPSTAPVPHRVFNLGNHTP-------VELETFIDVIAQAAGRAAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVEW 312 >gi|296876271|ref|ZP_06900324.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] gi|296432776|gb|EFH18570.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] Length = 359 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 50/348 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LVN+ + +V+V+D L G+ ++ + F Q D+ Sbjct: 28 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLV-TGHRAAVHPDA-----VFYQGDLA 81 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWS 116 D++ +R+ KE DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 82 DQDFMRTVFKEHADIDAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYI 141 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S ST YG ++ E P NP +PY +K + ++ YG Sbjct: 142 VFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMRWADQAYG 189 Query: 177 I---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNV 220 I P+ N + + G H PE + + ++ +G + ++G DG NV Sbjct: 190 IKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKISIFGDDYQTPDGTNV 249 Query: 221 RDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++ D A L L+KG +N+G + N+ IV + IP Sbjct: 250 RDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQIVEAARKVTGHPIP----- 304 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 305 ---LEMADRRPGDPDTLIASSEKARAILGWQPKFDNIETIIQTAWAWH 349 >gi|327394072|dbj|BAK11494.1| DTDP-glucose 4 6-dehydratase RfbB [Pantoea ananatis AJ13355] Length = 335 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG + + L+ QV+ +D L Y NL L I + F+F++ Sbjct: 1 MNFLVTGAAGFIGFHVSQRLLA-AGHQVVGLDNLNDYYDVNLKQARLDIIGDNPSFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ DR+ I + ++ +++ AA++ V S+ + N+IG +LE R Sbjct: 60 ANLADRQAIATLFEQHNFQRVIHLAAQAGVRYSLENPHAYADANVIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + L S+ VYG +K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHL--LYASSSSVYGLNNKMPFSTEDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y GQ RD+ Y++D A+ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYNQGQMKRDFTYIDDVAEAVIR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YN+G + + + ++ I + AL K+ + Sbjct: 231 LQDVIPQADADWTVETGSAASSSAPYRIYNLGNS---QPVSLIHYIEAIEKALGVKANKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D++ + + IG+ PQ ++ G+ + V WY Sbjct: 288 -----LMPMQPGDVLATSADTTALFNTIGFKPQTGVDEGVRRFVDWY 329 >gi|296775693|gb|ADH42969.1| Nucleoside-diphosphate-sugar epimerases [uncultured SAR11 cluster alpha proteobacterium H17925_38M03] Length = 321 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 30/335 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++IVTG AGFIG C + K VL +D L Y NL N LKE+ + F F + Sbjct: 1 MKIIVTGAAGFIGMHSCVKFLKS-KYYVLGLDNLNNYYDRNLKLNRLKELKKFKKFKFRK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI ++ I + ++++PD +++ AA++ V SI D++ +N++G +LE ++L Sbjct: 60 IDISNKNLI-NVFEKYKPDFVLHLAAQAGVRHSISNPDDYTVSNLVGFANVLECSKL--- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTY 175 C + + S+ VYG+ K SED P S Y ATK +++ + ++ H + Sbjct: 116 CKIK------HLIYASSSSVYGNSKKFPLSEDQNDIKPISYYGATKLANELMAYSYSHLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L I + + L+ G +RD+ Y++D ++ Sbjct: 170 KLPTTGLRFFTVYGPWGRPDMALFLFIDAIKNKKKIKLFNSGNMIRDFTYIDDIATSIEK 229 Query: 236 VLKKG------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 ++ K + +NIG NN + + L + F + G Sbjct: 230 IINKSPKEKNNTPAKIFNIGSNNPT-------HLKKYISTLEKVLKVKSLKKNFPMQK-G 281 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K++ I + P+ ++++G+ V WY Sbjct: 282 DVKHTHANIKKLRKSINFKPKTSIQTGVKNFVNWY 316 >gi|221200577|ref|ZP_03573619.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD2M] gi|221209236|ref|ZP_03582226.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD2] gi|221170892|gb|EEE03349.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD2] gi|221179918|gb|EEE12323.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD2M] Length = 329 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAG+IGS C+ L V D T G+ ++++ + I Sbjct: 1 MKVFVTGGAGYIGSHTCKALAEAGHAPVAYDDLST--GHRDAVR------WGPLVVGSIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + AL +PD +++FAA ++V S+L D + TN+ GT LL R Sbjct: 53 DRDALGRALAAHRPDIVIHFAALAYVGESVLAPDRYYATNVTGTCTLLNAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-V 179 R + S+ YG D E P +P +PY TK + + + + YG+ V Sbjct: 105 -TAGVGRIVLSSSCATYGIPDALPICEHTPQHPINPYGFTKYAMERMAADFERAYGLQWV 163 Query: 180 LL-------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFLY-------GDGQNVRDWL 224 L ++ G H PE +PLAI + F DG VRD++ Sbjct: 164 ALRYFNAAGADPDGLLGENHEPETHALPLAIRAALGTGRPFTVMGTDYPTPDGSAVRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV+A + + G N+G +++V + + +P + Sbjct: 224 HVSDLADAHVKATAYLCRGGN-SVALNLGTGTGTSVLELVRAVETATGSRVPTVMA---- 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++K +GW P+ +E + V W+ Sbjct: 279 ----ARRPGDPPALYADATKAALVLGWRPRFAGIEPMVEHAVRWF 319 >gi|115523473|ref|YP_780384.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] gi|115517420|gb|ABJ05404.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] Length = 327 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 39/342 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M ++VTG AGFIG + R LVN + +V+ +D L L+ L+++ F Sbjct: 1 MTILVTGAAGFIGFHVARELVNAGQ-RVIGVDSLNDYYDPALKRARLDMLRDLPG---FE 56 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 FLQ D+ DR + + + +++ AA++ V S+ +I N+ G +LE R Sbjct: 57 FLQADLADRAATAALFAKHKFPVVIHLAAQAGVRYSLQHPHAYIDANLQGFANVLEGCR- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 C + S+ VYG+ K F+ D +P S Y+ATK +++ + ++ Sbjct: 116 HNGCR--------HLVYASSSSVYGANTKLPFAVSDRTDHPISLYAATKKANEVMAYSYS 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP++ P+ + L ++ G + L+ G+ RD+ YV+D R Sbjct: 168 HLYKLPTTGLRFFTIYGPWYRPDMALFLFAKAIVAGEPIKLFNHGKMRRDFTYVDDVTRV 227 Query: 233 L-YLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + L+ GE YN+G ++ + + +V L+ + Sbjct: 228 ISRLIDHVPEAGETQFGVAPARIYNVGNHHPEELMHVV--------GLLEQELGRVAAKE 279 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + ++G+ P + GL + WY Sbjct: 280 MLPMQPGDVPATFADVDDLIRDVGFSPSTPIADGLREFARWY 321 >gi|116329518|ref|YP_799238.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329833|ref|YP_799551.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122262|gb|ABJ80305.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123522|gb|ABJ74793.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 312 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 152/335 (45%), Gaps = 38/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ + +V+ +D L + G +++++ F F++ DI D Sbjct: 5 RILITGGAGFIGSHLCERLLKEGN-EVICLDNL-HTGRKKNIQKLFSDPKFEFIRHDITD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + A + I TN++G + L Sbjct: 63 P-------IKLEVDQIYNMACPASPIHYQSNAIKTIKTNVLG----------MMNTLGLA 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG+ + E P S Y K ++ L + + Sbjct: 106 KRVKARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHK 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP P +++ I + ++ + LYG+G+ R + YV+D V + Sbjct: 166 VDVRVIRIFNTYGPKMLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGII 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDR 292 ++ N+G + E F + L + ++ ++ S ++++ +D P Sbjct: 226 RMMNTEGFNGPVNLGNDGE-------FTVRELAELVLKETGSVSKIVHKPLPQDDPA--- 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D + K ++G+ P+ + G+ KTV ++ +N Sbjct: 276 RRKPDLTLAKQQLGFEPKVPLVEGIRKTVEYFKNN 310 >gi|239827438|ref|YP_002950062.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] gi|239807731|gb|ACS24796.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] Length = 328 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 146/332 (43%), Gaps = 54/332 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + +V+V+D NL + + +F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVYRLIEKGE-KVIVVD------NLQTGHREAVHPEATFYQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++ + D +++FAA S V S+ ++ N+ GT +LLE Sbjct: 55 AFLRDVFRKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVM----------- 103 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 104 -NEFGVKQIVFSSTAAVYGEPKQIPIVETDPTLPTNTYGETKLAMEKMMKWVDRAYGIRY 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N G Y H PE LIPL + + + + ++G DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTIIGEDHNPETHLIPLILKVPLGQREEIHIFGDDYDTPDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIP---KSYSHT 278 +V D V A L ++K R G YN+G + GF + +I K H Sbjct: 223 HVLDLVDAHILAVEKLRSGAESTVYNLGNGS-----------GFTVKEVIEAARKVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R + RPG + S K K E+GW P+ Sbjct: 272 IPARVMARRPGDPAKLVASSEKAKRELGWEPK 303 >gi|84502185|ref|ZP_01000333.1| dTDP-glucose 4,6-dehydratase protein [Oceanicola batsensis HTCC2597] gi|84389545|gb|EAQ02264.1| dTDP-glucose 4,6-dehydratase protein [Oceanicola batsensis HTCC2597] Length = 332 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 33/329 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGF+GS LC L+ ++V+ +D + G +++ + F+ ++ D+ D Sbjct: 11 LVAGGAGFLGSHLCDELLAR-GLRVICLDNF-HTGRRSNVAPLCNDRRFTLIEADVTD-- 66 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L + D + N A+ + + TN++GT LL S + Sbjct: 67 ---ARLPDQPVDWVFNLASPASPPHYQSDPVRTMMTNVVGTGNLL----------SFATR 113 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R+LQ ST EVYG + ED P + Y K +++ L + Sbjct: 114 AGARYLQASTSEVYGDPELHPQREDYWGHVNPIGKRACYDEGKRAAESLCYDHFRAGSLD 173 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 V ++ N YGP + +++ + + +EG + +YGDG R + YV D VR L + Sbjct: 174 VRVARIFNTYGPRMRSDDGRIVSNLLVQALEGREITVYGDGSQTRSFCYVSDLVRGLIAL 233 Query: 237 LKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + E N+G E +D+ I K+ S + I F +R Sbjct: 234 MAVDETPEGPVNLGNPQEVSVLDLAHHIR--------KALSSSSSITFKPLPSDDPKRRR 285 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ KS + W P+ ++ GL +T W+ Sbjct: 286 PDITRAKSLLDWTPKVPLDEGLARTAAWF 314 >gi|291543443|emb|CBL16552.1| GDP-D-mannose dehydratase [Ruminococcus sp. 18P13] Length = 310 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 40/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GG GF+G+ YL+ +L + G +EI + + +DI Sbjct: 1 MNTLVIGGGGFVGA----YLIAELNAGGHRVHATKLPG-----EEIRGT--CTIHDLDIL 49 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + + L++ +PD I + AA+S V S + N+ GT LLE R Sbjct: 50 QPEAVSALLEQLKPDWIFHLAAQSSVALSWKRPQLTVDVNVKGTLNLLEAVRRL------ 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 Q R L I + E YG + ED P +P + Y+ATKA L + YG+ +L Sbjct: 104 --AHQPRVLLIGSGEEYGPVHCCPVGEDTPLHPGNVYAATKACQGMLGEIYAKAYGMDLL 161 Query: 181 LSNCSNNYGPYHFPEKLIP-----LAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N+ GP P ++ A + + V G+ RD+ V D VRA L Sbjct: 162 CVRAFNHVGPGQAPMFVVSDFCRQTAAIELGQQEPVIRIGNLSAKRDFTDVRDVVRAYVL 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + +KG G YN+G EI +LD ++ +S + + E P R Sbjct: 222 LAEKGIAGRVYNVGSGK-------AVEIRGILDLILAQSGAKIQ----AETDPAKLRPVD 270 Query: 296 I-----DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D +++ + GW Q +E + T+ ++ Sbjct: 271 VPVVEADIRRLQEDTGWQRQIPLEQTIRDTLAYW 304 >gi|37526391|ref|NP_929735.1| hypothetical protein plu2499 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785822|emb|CAE14873.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 337 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 153/348 (43%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+ + +V+ ID L Y NL L + + F F + Sbjct: 1 MKFLVTGAAGFIGFHVSQRLLQ-MGHEVVGIDNLNDYYDVNLKQARLDLLFDRSGFKFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR I Q +++ A++ V S+ +I +NIIG +LE R Sbjct: 60 LDLADRIAIPDLFSRHQFQRVIHLGAQAGVRYSLQNPMAYIDSNIIGHINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L S+ VYG K FS D +P S Y+ATK S + + ++ H Y Sbjct: 116 -----HNNVEHLLYSSSSSVYGLNRKQPFSTNDSVDHPVSLYAATKKSDELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y G VRD+ Y++D V ++ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAMLSGQPIDVYNHGNMVRDFTYIDDIVESIIR 230 Query: 236 ------------VLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +++ G+I YNIG + +G ++A I +S Sbjct: 231 LQEIIPTSNEGWMVEDGQISASSAPYCIYNIGNGQPTR-------LGDFIEA-IEESLGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 F+ + G DSS I +IG+ P +++ G+ + V WYL Sbjct: 283 QAKKNFMPMQDGDVLSTCADSSGIVQKIGFAPNTSVKQGVKQFVEWYL 330 >gi|322378634|ref|ZP_08053070.1| GDP-D-mannose dehydratase (RfbD) [Helicobacter suis HS1] gi|321148941|gb|EFX43405.1| GDP-D-mannose dehydratase (RfbD) [Helicobacter suis HS1] Length = 367 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 17/243 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G GS L R+L+ DL +V I + + + N + +++ S+ FL D Sbjct: 6 LITGITGQDGSYLARHLL-DLGYEVHGIKRRSSSFNTARIDLIYEDVHSSHTHFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I S L + +P I N AA+SHV S + + +GT +LE RL Sbjct: 65 LTDSSNITSLLAKIRPTEIYNLAAQSHVQVSFEMPEYTANVDALGTLRILEAMRLLG--- 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KD RF Q ST E+YG + + +E+ P+NP SPY+ K + Y+ + YG Sbjct: 122 ---LKDT-RFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKLYAYYITKNYREAYGFF 177 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 + N+ P F + I +AI+RM+ G LY G+ RD+ + D+V+A++ Sbjct: 178 AVNGILFNHESPVRGETFVTRKITMAISRMLFGLQDCLYLGNLDAKRDYGHALDYVKAMH 237 Query: 235 LVL 237 L+L Sbjct: 238 LIL 240 >gi|229076479|ref|ZP_04209441.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-18] gi|228706665|gb|EEL58876.1| UDP-glucose 4-epimerase [Bacillus cereus Rock4-18] Length = 340 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 161/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLKS-GYEIIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + KE +A+++FA V S+ + NI T +L C Sbjct: 59 ILNREALDTVFKENTIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ T Sbjct: 110 VMQKHNVKKIIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADTEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL V+ + + YN+G + +V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVIHTTGV-DAYNLGTGTGYSVLGMVEAFEKVSGKEVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D +K K E+GW +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADVAKAKRELGWEATRGLEE-----MC---ADSWRWQ 328 >gi|86152007|ref|ZP_01070220.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124861|ref|YP_004066865.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|56783461|emb|CAI38714.1| putative GDP-mannoheptose-4,6 dehydratase [Campylobacter jejuni] gi|85841115|gb|EAQ58364.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 260.94] gi|315018583|gb|ADT66676.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 343 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRIGIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESKRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRI---LKAKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG++ GE +NI G F++ ++D L+ +S + I+ +D Sbjct: 241 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDMLL--GFSTRKDIKVEQDEER 291 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W PQ Sbjct: 292 LRPIDADYQMFDNAKIKSFIDWKPQ 316 >gi|150020972|ref|YP_001306326.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] gi|149793493|gb|ABR30941.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] Length = 321 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 46/327 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS +C+ +++ +V+V D L++ KE ++ F+ DI Sbjct: 1 MAILVAGGAGYIGSHVCK-MLHSKGYKVIVYDNLSHG-----YKEFAKWG--EFIPGDIS 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + K + DA+++F A V S++ ++ N+ T LL+ R Sbjct: 53 DVELLDNIFKHYHIDAVMHFCAYIEVGESVVDPQKYYENNVGNTIKLLKVMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + +F+ ST VYG +K ED +P +PY +K + ++ + YG+ + Sbjct: 105 -KNNIDKFIFSSTAAVYGMPEKVPIKEDDKKDPINPYGKSKWMVEQMLEDYDKAYGLKSI 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ G H PE LIPL + I + ++G DG +RD++ Sbjct: 164 RFRYFNAAGADEEGEIGEAHKPETHLIPLILDAAIGRRDSIKIFGTNYDTKDGTCIRDFV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++ L +L G+ + +N+G V+E+ + + K++ E Sbjct: 224 HVNDLADAHIKGLEYLLDGGKT-DYFNLGSGEGYS----VYEVIEAVKRVTKKNFKVVET 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGW 307 R RPG DS+K K ++GW Sbjct: 279 DR----RPGDPAYLIADSTKAKEKLGW 301 >gi|229170345|ref|ZP_04298022.1| hypothetical protein bcere0007_52750 [Bacillus cereus AH621] gi|228613134|gb|EEK70282.1| hypothetical protein bcere0007_52750 [Bacillus cereus AH621] Length = 314 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 149/329 (45%), Gaps = 28/329 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L L+ K +V V+D L Y+G +LK + + DI D Sbjct: 5 LVTGGAGFIGSHLVHALLKQGK-EVKVLDNL-YSGKEENLKGVLHD--IKLIIGDITDYH 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +++ALK D + + AA V RSI+ NI GT LL L + K Sbjct: 61 TVKNALKGV--DVVYHLAAVPSVPRSIVNPMLSNKVNITGTLQLLH------VALELNVK 112 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 RF+ S+ +YG+ + + E+M P SPY+ +K + + + YG+ + Sbjct: 113 ---RFIYSSSSSIYGNSNFIIKKENMAPAPLSPYAISKYAGELYCKTFYELYGLETVSLR 169 Query: 184 CSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP + +IP I+ + + +YGDG RD+ YV++ V A L Sbjct: 170 YFNVFGPKQDSQSEFAAVIPKFISTIHQNHSPIIYGDGTQTRDFTYVDNVVSANLLASDA 229 Query: 240 GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 ++ GE NIG N +V I LL +Y+ E + G R + Sbjct: 230 EKLHGEVINIGCGNGISLNSLVDNINLLLGKQTISTYT--------ESKKGDVRHSIANL 281 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K +S + + P + + GL T+ WY DN Sbjct: 282 QKAESLLSYRPLVSFDEGLKSTIHWYKDN 310 >gi|89094083|ref|ZP_01167026.1| putative nucleotide sugar epimerase [Oceanospirillum sp. MED92] gi|89081558|gb|EAR60787.1| putative nucleotide sugar epimerase [Oceanospirillum sp. MED92] Length = 333 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 156/346 (45%), Gaps = 41/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG L + +V+ +D L Y NL LKEI+ F F++ Sbjct: 1 MKFLVTGAAGFIGFYTAARLC-EAGHEVVGLDNLNDYYDVNLKHARLKEITPYKNFRFVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + K + + +++ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LDIADRAGMEKLFKTEKFNRVIHLAAQAGVRYSLENPFAYVDSNLVGMMTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + S+ VYG K FS D +P S Y+ATK S++ + ++ H Y Sbjct: 116 -----QNNVEHLVYASSSSVYGMNTKMPFSTVDGVDHPVSLYAATKKSNELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ L +I + ++ G+ RD+ YV+D V + Sbjct: 171 DIPTTGLRFFTVYGPWGRPDMAPFLFTDAIINERPIKVFNHGKMRRDFTYVDDIVEGVVR 230 Query: 236 V--LKKGRIGER--------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + + R R YNIG N + ++ + I +S + E Sbjct: 231 IQDVIPSRDNNRTMDNPSISKAPYRVYNIGNNEPIELMEFIQAI---------ESAAGKE 281 Query: 280 LIR-FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ F+ +PG + ++ +G+ P +++ G+++ V WY Sbjct: 282 AVKEFMPMQPGDVPATFANVEDLEKTVGFKPNTSIQGGMSQFVDWY 327 >gi|206975880|ref|ZP_03236791.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] gi|217962945|ref|YP_002341523.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|229142200|ref|ZP_04270725.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] gi|206745974|gb|EDZ57370.1| UDP-glucose 4-epimerase [Bacillus cereus H3081.97] gi|217068215|gb|ACJ82465.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|228641489|gb|EEK97795.1| UDP-glucose 4-epimerase [Bacillus cereus BDRD-ST26] Length = 338 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSIESINRVKEITGKK-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++E + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNQEALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWG-HTY 175 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADREW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 I +L ++ S G P P L+P +A+ ++ E S + + DG + Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGI 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLAKGHVKALEKVLNTTGV-DAYNLGTGTGYSVLEMVEAFERVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAICFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|170734549|ref|YP_001773663.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia MC0-3] gi|169820587|gb|ACA95168.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia MC0-3] Length = 348 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 149/337 (44%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPS---SPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP+ + Y K ++ L + Sbjct: 106 GLAKRVKARILQASTSEVYG--DPDVHPQDEHYCGRVNPTGIRACYDEGKRCAETLFADY 163 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YGI V ++ N YGP P +++ +T+ + + +YGDG+ R + YV+D Sbjct: 164 HRQYGIDVRIARIFNTYGPRMHPADGRVVSNFVTQALAEQPLTVYGDGKQTRSFCYVDDM 223 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G E N+G + E ID+ E+ ++ A +P E D P Sbjct: 224 VDALIRLMDEPGDTSEPVNLGSDVEIAMIDVAREVVRIVGANVP-----IEFRPLPSDDP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ + + + +GW +GL T +++ Sbjct: 279 ---RQRRPNLAAAQKRLGWRATTTFANGLAHTARYFI 312 >gi|75675267|ref|YP_317688.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] gi|74420137|gb|ABA04336.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi Nb-255] Length = 339 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 47/348 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG + L+ +V+ ID L Y L L+ + + F F++ D Sbjct: 6 ILVTGAAGFIGFHVAARLLKQGH-RVVGIDSLNDYYDPALKECRLEILRGDSRFRFVKSD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + E +++ AA++ V S+ ++ +N+ +LE R SC Sbjct: 65 LADREATAALFAEHHLSVVLHLAAQAGVRYSLRNPHAYVDSNLTAFANVLEGCR-HASCP 123 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L S+ VYG+ K FS D +P S Y+ATK S++ + A+ H Y + Sbjct: 124 --------HLLFASSSSVYGANTKLPFSVHDNVDHPISLYAATKKSNELMAHAYSHLYRV 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP++ P+ + ++ G + L+ G RD+ +V+D V A+ ++ Sbjct: 176 PTTGLRFFTVYGPWYRPDMALYKFADAIVGGQPIKLFNHGNMQRDFTFVDDVVEAVVRLI 235 Query: 238 KKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + RI YNIG N + + +V AL+ K+ Sbjct: 236 DRAPQPHASWSGDASDAGTSSAPWRI---YNIGNNKPAELMGVV--------ALLEKALG 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + D + ++G+ P ++E G+++ WY Sbjct: 285 RSAQKELLPMQPGDVQATFADIDDLARDVGFRPSTSLEDGIHRFADWY 332 >gi|115314475|ref|YP_763198.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica OSU18] gi|167009542|ref|ZP_02274473.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC200] gi|169656548|ref|YP_001428063.2| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367344|ref|ZP_04983370.1| NAD dependent epimerase [Francisella tularensis subsp. holarctica 257] gi|115129374|gb|ABI82561.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica OSU18] gi|134253160|gb|EBA52254.1| NAD dependent epimerase [Francisella tularensis subsp. holarctica 257] gi|164551616|gb|ABU61107.2| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 327 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 151/331 (45%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 18 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 75 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 76 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 125 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 184 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 185 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 244 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 245 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 297 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 327 >gi|1752648|emb|CAA71250.1| glucose epimerase [Bacillus thuringiensis] Length = 322 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 153/326 (46%), Gaps = 44/326 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ V+ +D + Y +L + LK + + + F F + Sbjct: 4 MKILVTGAAGFIGFHLTKRLLAQ-NFHVIGVDSINDYYDVSLKKHRLKILEKKSNFKFYK 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI ++E + KE ++N AA++ V SI D ++ +N++G +LE R + Sbjct: 63 IDISNKENLNQIFKEQIVHIVINLAAQAGVRYSIENPDSYVNSNLVGFVNILEACRQY-- 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ FS +D +P S Y+ATK S++ + + H + Sbjct: 121 -------NVEHLIYASSSSVYGANTSIPFSTKDSVDHPVSLYAATKKSNELMAHTYSHLF 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR--MIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 IP YGP+ P+ + + TR +IE + + ++ +G RD+ Y++D + + Sbjct: 174 NIPTTGLRFFTVYGPWGRPD-MAYYSFTRNIIIENNTIRVFNNGDMRRDFTYIDDIIEGI 232 Query: 234 Y-LVLKKGRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 L+ + E+ YNIG N K +D + +L+ LI K Sbjct: 233 IRLIGNPPQYNEKWDKANPGLSSSYAPYKIYNIGNNIPIKLMDFI----HILEKLIGKKA 288 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKI 301 I F+ +PG + D S+I Sbjct: 289 K----IEFLPMQPGDVKETYADISRI 310 >gi|300024632|ref|YP_003757243.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans ATCC 51888] gi|299526453|gb|ADJ24922.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans ATCC 51888] Length = 334 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG L+ + V+ +D + Y L L ++ N FSF + Sbjct: 1 MKFLVTGVAGFIGFHTAERLLARGDV-VIGVDNINDYYDPKLKEARLAKLEGRNGFSFHR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++I D + + + +P+ +++ AA++ V +I +NI+GT +LE Sbjct: 60 LNIADGAAMAALFQSERPEKVIHLAAQAGVRYGQENPGAYIESNIVGTQSILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C D K + S+ VYG+ FS D +P S Y+ATK S++ + + Y Sbjct: 114 CRHNDVK---HLVLASSSSVYGANTAMPFSIHDNVDHPLSLYAATKKSNELTAHTYAYLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV YGP+ P+ + +++ G + ++ +G + RD+ Y++D V + Sbjct: 171 QLPVTALRFFTVYGPWGRPDMALFKFTRQILAGEPIEVFNNGHHARDFTYIDDIVEGVLR 230 Query: 236 VLKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 K GE+ YNIG N+ + +D + A ++ Sbjct: 231 TADKIANPNPDWSGEKPDPATSMAPYRVYNIGNNSPVELMDFI--------AATERAVGR 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D + ++G+ P +E G+ + V WY Sbjct: 283 ESKKIFLPMQPGDVPTTFADVDDLVRDVGFKPATPLEEGIARFVAWY 329 >gi|9631687|ref|NP_048466.1| hypothetical protein PBCV1_A118R [Paramecium bursaria Chlorella virus 1] gi|1131462|gb|AAC96486.1| PBCV-1 GDP-D-mannose dehydratase [Paramecium bursaria Chlorella virus 1] gi|29367185|gb|AAO67555.1| GDP-D-mannose 4,6 dehydratase [Paramecium bursaria Chlorella virus 1] Length = 345 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 153/337 (45%), Gaps = 41/337 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG G G+ LC +LV K V + + + N E +S + D+ D Sbjct: 7 LVTGATGQDGTYLCPFLV---KKGYTVYGLVRHTSSENPRVEELKSQGVEIVHGDLTDSA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + + +PD I N AA+S V S A+ + +G LL+ R+ + L+ Sbjct: 64 SLINIITKIRPDEIYNMAAQSFVGDSFHQAEVTANVDALGVLRLLDAVRI--AGLNS--- 118 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R Q ST E+YG + + +E P+ P SPY K + ++ + +YG+ V S Sbjct: 119 ---RICQASTSELYGKVQEIPQTERTPFYPRSPYGVAKLYAYWICKNYRESYGMFVCNSI 175 Query: 184 CSNNYGP---YHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLKK 239 C N+ P + F + I A+ + G +Y G+ + RDW Y ED++ A++L+L++ Sbjct: 176 CFNHESPNRGHQFVTRKITKAVANIFNGVEKCMYLGNIDSKRDWGYAEDYIEAMWLMLQQ 235 Query: 240 GRIGERYNIGGNNE--RKNIDIVF---------------EIGFLLDALIPKSYSHTE--- 279 + G R+ + I F EI +++ + P++ SH + Sbjct: 236 DTPDDYVIATGQTTSVREFVKIAFGVLDIVVEFSGENENEIAYVVSS--PEA-SHVKVGD 292 Query: 280 -LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENM 313 ++R +D RP D++K KS +GW P+ + Sbjct: 293 VVMRVNKDFYRPAEVDLLVGDATKAKSVLGWEPKTTL 329 >gi|33864736|ref|NP_896295.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] gi|33632259|emb|CAE06715.1| Putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] Length = 340 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 46/349 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+AL + L+ + +V+ +D L L ++ + + F Sbjct: 5 VLVTGAAGFIGAALSQRLLARGE-RVVGLDNLNSYYDPALKQARLRQVEATASKGAWRFE 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + D + + + E +PD +VN AA++ V S+ +I +N++G +LE R Sbjct: 64 PISLEDGDALTALFAEERPDVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 D + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 121 ------HHDVGHLVYASSSSVYGGNRNLPFHERQPVNHPVSLYAASKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V + Sbjct: 175 YGVPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGRMQRDFTYIDDIVEGV 233 Query: 234 YLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 K +NIG + + + + ++ ++ Sbjct: 234 LRCCDKPATANPDFDPLQPDPATAAAPHRVFNIGNSQPTELLSFI--------EVMEQAL 285 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F +PG A D+ ++ +G+ P +E+G+ + WY Sbjct: 286 GRDAIKDFQPMQPGDVVATAADTKALEDWVGFRPSTAIEAGVAQFAEWY 334 >gi|144898173|emb|CAM75037.1| NAD-dependent epimerase/dehydratase [Magnetospirillum gryphiswaldense MSR-1] Length = 316 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 152/335 (45%), Gaps = 43/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D VL +D Y G+ +++ + + F ++ D+ Sbjct: 7 RVLVTGGAGFLGSHLCERLLADGH-DVLCVDNF-YTGSKDNIAHLIGNPYFELIRHDV-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G + L Sbjct: 63 -----TFPLYLEVDEIFNLACPASPVHYQRDPV---QTTKTSVHGAI----------NML 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + Q ST EVYG + +ED P P + Y K ++ L + Sbjct: 105 GLAKRINAKIFQASTSEVYGDPEVHPQTEDYRGSVNPIGPRACYDEGKRCAETLFFDYHR 164 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+ + ++ N YGP P+ +++ I + +EG + LYGDG R + +V+D + Sbjct: 165 QHGLRIKVARIFNTYGPRMHPDDGRVVSNFIVQALEGRPITLYGDGSQTRSFCFVDDLIE 224 Query: 232 ALYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ++ I N+G E I L +A+I + + +EL+ I+ P Sbjct: 225 GFIRLMNSADDITGPINLGNPQE-------MTIRELAEAVIKLTGAKSELV--IKPLPAD 275 Query: 291 DR-RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +K + ++GW P+ +E GL++T+ ++ Sbjct: 276 DPLQRQPNIAKAREKLGWEPKVALEDGLHRTIDYF 310 >gi|190895176|ref|YP_001985469.1| putative nucleoside-diphosphate-sugar epimerase [Rhizobium etli CIAT 652] gi|190700837|gb|ACE94919.1| putative nucleoside-diphosphate-sugar epimerase protein [Rhizobium etli CIAT 652] Length = 343 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 23/242 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF--LQVD 58 MR +VTG GFIG L R L+ + V D +T ++ SLKE + L S+ Q Sbjct: 1 MRFLVTGTGGFIGFHLARRLLEEGH-SVTGFDGMTRYYDV-SLKERRHAILSSYGNFQPI 58 Query: 59 IC---DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 I +RE + A QPD +V+ AA++ V S+ D +I +N++G+ W Sbjct: 59 IAMLENRERLTEAFNIAQPDVVVHLAAQAGVRYSLENPDAYIGSNLVGS----------W 108 Query: 116 SCLSQDKKDQFR---FLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 + L D QFR L ST +YG+ K F E D P + Y+A+K S + + + Sbjct: 109 NVL--DLCRQFRPNHLLLASTSSIYGANSKIPFEESDKADEPLTLYAASKKSMEVMAHSQ 166 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + IP YGP+ P+ + ++ ++ G + +YG GQ RD+ Y++D V Sbjct: 167 SHLHKIPTTAFRFFTVYGPWGRPDMALFKFVSAILNGKPIDVYGHGQMSRDFTYIDDLVE 226 Query: 232 AL 233 A+ Sbjct: 227 AI 228 >gi|209967042|ref|YP_002299957.1| NAD dependent epimerase [Rhodospirillum centenum SW] gi|209960508|gb|ACJ01145.1| NAD dependent epimerase [Rhodospirillum centenum SW] Length = 323 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 41/331 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC YL+ +VL +D + G+ +++ + F L+ D+ Sbjct: 3 RILVTGGAGFIGSHLCEYLLESGN-EVLCVDNY-FTGSKRNIEHLRDCPRFEVLRHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 59 -----TIPLYVEVDEIYNLACPASPVHYQHDPVQTTKTSVHGAINM----------LGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG ++ E+ P P + Y K ++ L + +G Sbjct: 104 KRLKARILQASTSEVYGDPEEHPQREEYWGNVNPIGPRACYDEGKRCAETLFFDYHRQHG 163 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 +P+ + N YGP P+ +++ I + ++G + +YGDG R + YV+D VR + Sbjct: 164 VPIKVIRIFNTYGPRMHPDDGRVVSNFIVQALKGDPITIYGDGSQTRSFCYVDDLVRGMV 223 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 ++ + G N+G E F I L + ++ + S + ++ +D P Sbjct: 224 RFMETPEAEPGP-VNLGNPGE-------FTILELAETVLRLTGSASPIVFRPLPQDDP-- 273 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RR D + + GW P + +GL +T+ Sbjct: 274 -RRRRPDIGRADALFGWRPGVPLATGLERTI 303 >gi|42784633|ref|NP_981880.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] gi|42740565|gb|AAS44488.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 10987] gi|324329403|gb|ADY24663.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 338 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D L+ + ++N +KEI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLNS-GYEIIVVDNLSNSSVESINRVKEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++E + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 VLNQEALDAIFEENAIEAVIHFAGFKAVGESVAIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWG-HTY 175 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ + Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADREW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 I +L ++ S G P P L+P +A+ ++ E S + + DG + Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGI 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL + + YN+G +++V + +P Sbjct: 230 RDYIHVVDLAKGHVKALEKVLNTTGV-DAYNLGTGTGYSVLEMVEAFERVSGKKVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAICFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|261416641|ref|YP_003250324.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373097|gb|ACX75842.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325695|gb|ADL24896.1| NAD-dependent epimerase/dehydratase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 311 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 36/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGF+GS LC L+ND +V+ +D + G + ++ + + F ++ D+ Sbjct: 1 MRCLVTGGAGFLGSHLCERLLNDGH-EVICLDNY-FTGRMANVAHLRDNRNFELIRHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I N A + + I T+++G + L Sbjct: 59 EPILL-------EVDRIFNLACPASPIHYQFNPVKTIKTSVMGAI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R LQ ST EVYG +ED P S Y K ++ L + + Sbjct: 102 AKRVKARILQASTSEVYGDPAVHPQTEDYWGNVNPIGIRSCYDEGKRVAETLFMDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP P +++ I + + G + +YGDG R + YV+D + Sbjct: 162 KVDIRIVRIFNTYGPRMLPNDGRVVSNFIVQALNGEDLTIYGDGSQTRSFCYVDDLIEGF 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ + +I NIG E +++ E+ L + S ++++ + PG D + Sbjct: 222 VRMMNQDKIIGPVNIGNPGEFTMLELAKEVLEL-------TGSKSKIV--YKPLPGDDPK 272 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + KS + W P + GL KT+ ++ Sbjct: 273 MRRPDITLAKSALKWEPTIPLRQGLEKTIVYF 304 >gi|309810341|ref|ZP_07704177.1| NAD dependent epimerase/dehydratase family protein [Dermacoccus sp. Ellin185] gi|308435706|gb|EFP59502.1| NAD dependent epimerase/dehydratase family protein [Dermacoccus sp. Ellin185] Length = 327 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 44/337 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGF+GS L LV +V+ +D L G ++ ++ S F ++ D+ Sbjct: 1 MRIVITGGAGFLGSHLSETLVARGH-EVVAVDNLV-TGRRANVTQLEASGRFELIEHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFA-AESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + + D I++FA A S VD L I T +G+ + + L Sbjct: 59 EPFDVGGDV-----DGILHFASAASPVDYLKLP----IETLRVGS-------QGTQNALE 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWG 172 + R + ST EVYG D + + Y NP P Y K ++ LVLA+ Sbjct: 103 LAVRKGARLVFASTSEVYG--DPQVHPQPETYWGHVNPVGPRGVYDEAKRYAEALVLAYR 160 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 G+ + N +GP P + IP + + + G V + GDG R YV+D V Sbjct: 161 EARGVDAGIVRIFNTFGPRMRPNDGRAIPNFVRQALAGEPVTVSGDGDQTRSICYVDDLV 220 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDI---VFEIGFLLDALIPKSYSHTELIRFIEDR 287 A+ +L + NIG +E D+ + E+ S S E I D Sbjct: 221 AAILAMLLETHDPGPVNIGNPHEISMRDLAQWIIELA--------GSSSTLEFIERPTDD 272 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P R D++K + +GW PQ +E+GL +T+ W+ Sbjct: 273 PSVRRP---DTTKAQRLLGWSPQVPVETGLQRTIEWF 306 >gi|329114282|ref|ZP_08243044.1| UDP-glucose 4-epimerase [Acetobacter pomorum DM001] gi|326696358|gb|EGE48037.1| UDP-glucose 4-epimerase [Acetobacter pomorum DM001] Length = 328 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 146/335 (43%), Gaps = 59/335 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAG++GS + L++D V+V+D NL + + +F+Q DI D Sbjct: 3 RFLVTGGAGYVGSHVVLALLDDGH-DVVVLD------NLRTGHRAAVPEQATFVQGDISD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +C+ L D I++FAA S V S+ ++T N F L++ +C+ Sbjct: 56 IDCLDKVLSSGTWDGILHFAALSLVGESMQNPMMYMTANAGYGFGLID------ACVRHG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAWGHTYGIP 178 K RF+ ST ++GS +G +ED P NP SPY +K Y+V L W I Sbjct: 110 VK---RFVFSSTANLFGSAGEGPINEDAPINPGSPYGESK----YMVERALYWADK--IH 160 Query: 179 VLLSNC-----------SNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQN 219 L S C + G H PE LIPL I ++ L+G DG Sbjct: 161 GLKSACLRYFNAAGADPAGRAGEDHRPETHLIPLVIDAALKRRPALTLFGEDYPTPDGTC 220 Query: 220 VRDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +RD+++V D RA VL K + +N+G N +I+ +G + + +P Sbjct: 221 IRDYVHVTDLARAHLAVLPLLNDKSVV---FNVGTGRGNSNREIIDAVGRVSNLEVPWQA 277 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G +++ + GW P+ Sbjct: 278 G--------PRRAGDPASLVASPARLMAATGWAPE 304 >gi|322833352|ref|YP_004213379.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602] gi|321168553|gb|ADW74252.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602] Length = 335 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+ V+ ID L Y NL L ++ F F++ Sbjct: 1 MKYLVTGAAGFIGFYVSQRLLA-AGHSVIGIDNLNDYYDVNLKLARLAQLENKVGFEFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + E + + +++ AA++ V SI + N+IG +LE R Sbjct: 60 LDLADREGMAALFAEQRFERVIHLAAQAGVRYSIENPLAYADANLIGFVNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HNKVGHLLYASSSSVYGLNKKQPFSTDDSVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + ++ G ++ +Y G+ RD+ Y++D A+ Sbjct: 171 KIPTTGLRFFTVYGPWGRPDMALFKFTKAILAGQNIDVYNHGEMRRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG +N K + + + L + K+ Sbjct: 231 LQDVIPQSDPDWTVEGGSPASSSAPYSVYNIGNSNPVKLMTYISALEKALGMVAGKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D+S + I + P+ +E G+ + V WY D Sbjct: 288 -----MLPMQPGDVHETSADTSPLAKAIDFKPETPVEQGVQRFVDWYRD 331 >gi|295115153|emb|CBL36000.1| Nucleoside-diphosphate-sugar epimerases [butyrate-producing bacterium SM4/1] Length = 307 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 27/287 (9%) Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 +Q D+ D + + ++++P +++ AA++ V S+ E+I TNI G F +LE R Sbjct: 27 LIQADVADEKAVAQIFEDYKPSLVLHLAAQAGVRYSVDHPKEYIRTNIAGFFNILEACRS 86 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 ++K + + S+ VYG K +S +D +P+S Y+ATK S + L A+ Sbjct: 87 L-----REKGEPLHLVFASSSSVYGDNQKIPYSVDDKTDSPASLYAATKKSGELLARAYS 141 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y IP YGP+ P+ RM++G + LY G RD+ YV+D V Sbjct: 142 RLYKIPATGLRFFTVYGPFGRPDMAYFKFTERMVKGIPITLYNYGDMRRDFTYVDDVVGC 201 Query: 233 LYLVLKKGRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--- 282 + + E +NIG ++ K D V L+ +S +I+ Sbjct: 202 ILKISGHPPKSENGCVPFRIFNIGNSHPEKLEDFV--------CLLEESLKRHGVIKKDT 253 Query: 283 ---FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ +PG + D S+ + E G + GL++ WY + Sbjct: 254 EREYLPMQPGDVYQTYADMSEYEKEFGAVSFTRLREGLDRFAGWYAE 300 >gi|310827640|ref|YP_003959997.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] gi|308739374|gb|ADO37034.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] Length = 330 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 96/359 (26%), Positives = 166/359 (46%), Gaps = 56/359 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M+++V GGAG+IGS + R L+ D V+V+D L+ G+ S+ E + L+V DI Sbjct: 1 MKVLVCGGAGYIGSHVVRALL-DKGYGVVVLDNLS-TGHRQSVPEGAA------LEVGDI 52 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D C+ + D +++F A S V S+ E+ N+ GT LL S ++ Sbjct: 53 RDAACLERLFLRHEVDCVMHFCANSLVGESMEKPIEYYDNNVYGTLCLLR------SMVN 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV----LAWGHTY 175 D K F+ ST YG ++ ED P +P++ Y TK + + ++ +A+G Y Sbjct: 107 NDIK---HFIFSSTAATYGEPERLPIDEDTPKHPTNTYGETKLAVEKMLHWMEVAYGLHY 163 Query: 176 GIPVLL----SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRD 222 + ++ S G H PE LIPL I + +G ++++G DG +RD Sbjct: 164 KVFRYFNASGAHPSGEIGEDHAPETHLIPL-ILKTAQGIRDKIYVFGDDYDTPDGSCIRD 222 Query: 223 WLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++V D A L ++ K + YN+G N ++++ ++ K+ + + Sbjct: 223 YIHVMDIAEAHILGMEDLVKSETSDVYNLGNGNGFSVLEVIEKV---------KAVTGKD 273 Query: 280 LIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I DR D I SS K + +GW P +N ++ + ++ W W + E Sbjct: 274 FEVEITDRRAGDPGVLIASSEKAQKALGWSP-------VNSSLEYIIETAWKWHQGHPE 325 >gi|296124024|ref|YP_003631802.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] gi|296016364|gb|ADG69603.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] Length = 313 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 34/329 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS +C L+ + +V+ +D + G + ++ + F + DI Sbjct: 5 VLVTGGAGFVGSHICDRLI-ERGDKVICLDNF-FTGRMANISHLKDHPQFQLVDHDIVHP 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + D I N A + + I T+ +G + L K Sbjct: 63 ITLDA-------DRIYNMACPASPVAYQYNPIKTIKTSTLGMI----------NMLGLAK 105 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R LQ ST EVYG +ED P P S Y K ++ L + + + + Sbjct: 106 RCKARILQASTSEVYGDPVVHPQTEDYWGHVNPLGPRSCYDEGKRVAESLCMNYHLAHQL 165 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P ++I IT+ ++G + +YGDG R + YV+D VR + Sbjct: 166 EIRIVRIFNTYGPRMDPNDGRVISNFITQALKGEPLTVYGDGSQTRSFCYVDDLVRGIMA 225 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ +G NIG E +++ ++ L A S S + +D P ++ Sbjct: 226 LMDQGIHTGPVNIGNPGEYTMLELAEQV---LKAT--GSKSTIDFRPLPQDDP---KQRC 277 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ K+ + W PQ + GL KTV +Y Sbjct: 278 PDITRAKAMLKWEPQIPLAEGLEKTVHYY 306 >gi|56459673|ref|YP_154954.1| nucleoside-diphosphate-sugar epimerase [Idiomarina loihiensis L2TR] gi|56178683|gb|AAV81405.1| Nucleoside-diphosphate-sugar epimerase [Idiomarina loihiensis L2TR] Length = 351 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 58/363 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKE--ISQSNL--- 51 M+++VTG AGFIG L+ V+ +D + Y NL L+E I QSN+ Sbjct: 1 MKVLVTGTAGFIGFYTALKLLKQGHT-VVGLDSINDYYDVNLKYGRLQESGIKQSNIEYG 59 Query: 52 ----------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +SF+Q+ + D+ + + ++ Q DA+ N AA++ V S+ + +I +NI Sbjct: 60 ATVQSGLYPDYSFVQLKLEDKPALDALFEQEQFDAVCNLAAQAGVRYSLENPNAYIDSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSAT 160 +G +LE +C K+ S+ VYG ++ FS N P S Y+AT Sbjct: 120 VGFMNVLE------ACRHNGVKN---LSYASSSSVYGLNEQMPFSTSHSVNHPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQN 219 K S++ + + H YG+ YGP+ P+ + P T+ ++G + ++ +G+ Sbjct: 171 KKSNELMAHTYAHLYGMQCTGLRFFTVYGPWGRPD-MAPFIFTKAALKGDTIKVFNNGKM 229 Query: 220 VRDWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNNERKNIDIVF 261 RD+ Y++D V + V++ G+ + YNIG + + + + Sbjct: 230 KRDFTYIDDIVEGVVRVIENPCKASSEWSGKQPDPSSSSAPYKIYNIGNSQPIELMTFIE 289 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + IPK + + PG D S+++S++G+ P + G+ +TV Sbjct: 290 AVENAAGVEIPKDFQPIQ--------PGDVVATYADVSELESDMGYRPSTPVTEGMKRTV 341 Query: 322 CWY 324 WY Sbjct: 342 DWY 344 >gi|21227295|ref|NP_633217.1| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1] gi|20905647|gb|AAM30889.1| dTDP-glucose 4,6-dehydratase [Methanosarcina mazei Go1] Length = 254 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 21/252 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS + Y + V ++D + K I Q F+Q DIC Sbjct: 1 MKVLITGGAGFIGSHIAEYFA-EAGHSVRILDNFATGFS----KNIPQHKNVEFIQGDIC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ D + N AA V S E N +GT +L+ +C+ + Sbjct: 56 DPSSVEKAISGM--DCVFNEAALVSVPLSCEKPVEAFRINTLGTLNVLQ------ACVRE 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ S+ VYG+ SE M P+SPY+ +K ++L + +G+ Sbjct: 108 GVE---KFVTASSAAVYGNNPVLPKSEGMYPEPASPYAISKLDGEFLAKMFYEEHGLRTT 164 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP P+ +IP+ + + G + ++GDG RD+++V D VRA Sbjct: 165 CLRYFNVYGPRQDPKSPYAAVIPIFLEKAKAGKDLVIHGDGLQSRDFVHVRDVVRANVAA 224 Query: 237 LKKGRIGERYNI 248 L+ G G+ +N+ Sbjct: 225 LENGD-GQVFNL 235 >gi|107022926|ref|YP_621253.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU 1054] gi|116686831|ref|YP_840078.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia HI2424] gi|105893115|gb|ABF76280.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU 1054] gi|116652546|gb|ABK13185.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia HI2424] Length = 348 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 149/337 (44%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGTKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPS---SPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP+ + Y K ++ L + Sbjct: 106 GLAKRVKARILQASTSEVYG--DPDVHPQDEHYCGRVNPTGIRACYDEGKRCAETLFADY 163 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YGI V ++ N YGP P +++ +T+ + + +YGDG+ R + YV+D Sbjct: 164 HRQYGIDVRIARIFNTYGPRMHPADGRVVSNFVTQALAEQPLTVYGDGKQTRSFCYVDDM 223 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V AL L+ + G E N+G + E ID+ E+ ++ A +P E D P Sbjct: 224 VDALIRLMDEPGDASEPVNLGSDVEIAMIDVAREVVRIVGANVP-----IEFRPLPSDDP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ + + + +GW +GL T +++ Sbjct: 279 ---RQRRPNLAAAQKRLGWRATTTFANGLAHTARYFI 312 >gi|315187383|gb|EFU21139.1| NAD-dependent epimerase/dehydratase [Spirochaeta thermophila DSM 6578] Length = 350 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 40/353 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQS--------- 49 MR +VTG AGF+G L L+ +V+ ID L+ Y L + Sbjct: 1 MRFLVTGSAGFVGFHLVDLLLRKGH-EVVGIDNLSPYYDVGLKKARLAEHGIVVGERGEG 59 Query: 50 ------NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 + ++F DI D + + L+ + +++ AA++ V S+ + ++ +NI G Sbjct: 60 ISSRIRDGYTFYFGDIRDSGFLETLLRRHGVERVIHLAAQAGVRYSLTHPEVYLQSNIEG 119 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKA 162 +++LE +R C + R + ST VYG +K FSE D +P S Y+ATK Sbjct: 120 FWVVLEASR---RCGVE------RLVYASTSSVYGLNEKVPFSERDGVDHPVSLYAATKR 170 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S++ + H YG+P + YGP+ P+ R+++G + ++ G+ RD Sbjct: 171 SNELFAHVYSHIYGLPTIGLRFFTVYGPWGRPDMAYFSFTERILKGEPIEVFNHGRMERD 230 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDI----VFEIGF-----LLDAL--I 271 + YVED V + V + + ER + ++ R + V+ IG L+D + I Sbjct: 231 FTYVEDVVEGVARVAEH-PLPERRDWDPSDPRPDRSSAPFWVYNIGHGSPVGLMDFIRAI 289 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ I + E +PG + ++ +G+ P + G+ + V WY Sbjct: 290 EEALGREARIVYREMQPGDVVATHASTESLEEAVGYHPSTPLSEGIRRFVAWY 342 >gi|126667945|ref|ZP_01738910.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Marinobacter sp. ELB17] gi|126627605|gb|EAZ98237.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Marinobacter sp. ELB17] Length = 333 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 28/334 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQVD 58 ++TG AGFIGS L +L+ L V+ +D N SL + Q + FSF + D Sbjct: 12 LITGVAGFIGSNLLEHLLK-LNQNVVGLDNFATGHKHNLDEVQSLVTLEQWSRFSFTEGD 70 Query: 59 I-CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I +++C ++ D +++ AA V RSI NI G +L R Sbjct: 71 IRNEKDCAKAC---GGVDYVLHQAALGSVPRSINDPVTTSAVNITGFLNMLVAAR----- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 F ++ YG ED P SPY+ TK ++ + TYG Sbjct: 123 ----AAGVKSFTYAASSSTYGDHPALPKVEDNIGKPLSPYAVTKYVNELYADVFAITYGF 178 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 + N +G P+ +IP M+ G +VF+ GDG+ RD+ ++E+ V+A Sbjct: 179 KTIGLRYFNVFGKRQDPKGAYAAVIPKWTEAMLCGDNVFINGDGETSRDFCFIENAVQAN 238 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + E YN+ +R ++I+F+ L +AL + + + + RPG Sbjct: 239 LLAATADEAVKNEVYNVA-VGDRTTLNILFDS--LKEALAENGVVYEKAPVYRDFRPGDV 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R D SK S++G+ P+ + G++K + WYL Sbjct: 296 RHSQADISKAASKLGYAPEYRIVEGISKAMPWYL 329 >gi|325968607|ref|YP_004244799.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323707810|gb|ADY01297.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 310 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 31/246 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS + LVN+ +V VID L+ +G L +LK + S ++ I D Sbjct: 5 ILITGGAGFIGSHMVDRLVNE-GFKVRVIDNLS-SGRLENLKHLGTS-----IEAMIGDL 57 Query: 63 ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ALK DA+ +FAA V S + N++ TF LLE R Sbjct: 58 KKPEDALKAVDGVDAVFHFAANPEVRVSTTNPETHFNENVVATFNLLEAMR--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ + S+ VYG + ED P P S Y A+KA+ + L+ A+ YGI ++ Sbjct: 109 RRGVKELVFASSSSVYGEPSEIPVGEDAPIRPVSVYGASKAACENLIHAYTRLYGIRAVV 168 Query: 182 SNCSNNYGP-------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N GP + F KL R +E + G+G VR ++Y++D V A Sbjct: 169 LRYANVVGPRLRHGVVWDFMNKL--RTNPRELE-----VLGNGTQVRSYIYIDDAVEATI 221 Query: 235 LVLKKG 240 L +K Sbjct: 222 LAWRKA 227 >gi|325968293|ref|YP_004244485.1| UDP-glucose 4-epimerase [Vulcanisaeta moutnovskia 768-28] gi|323707496|gb|ADY00983.1| UDP-glucose 4-epimerase [Vulcanisaeta moutnovskia 768-28] Length = 293 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 43/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-AGNLNSLKEISQSNLFSFLQVDI 59 M+++VTG +GF+G R LVN ++ + Y A L+ +K + + VDI Sbjct: 1 MKILVTGSSGFLG----RNLVNCMRAR-------GYDAHGLDMVKAETTDYM-----VDI 44 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSIL--GADEFITTNIIGTFILLEETRLWWSC 117 R+ + KE DA+++ AA + RS + GA + + N++GT +LE TR+ + Sbjct: 45 TRRDDVIGLSKE-GFDAVIHLAAFPN-PRSFINAGALKGLDVNVVGTINVLELTRILNA- 101 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RFL ST VYG K ED P P Y +K +++ + +++ + + Sbjct: 102 ---------RFLLYSTSNVYGKPLKLPVMEDDPLRPFEGYGWSKVAAEAVSMSYQVVHKV 152 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + YGPY ++ + IT+ + + + G + D+LYVED A L L Sbjct: 153 PVTIFRLWKPYGPYD--NGVVGIFITKAFKNEDLVVNNGGADTTDFLYVEDLCDATELAL 210 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +K IG+ +NIG E +D L A+I S + + ++ R R Sbjct: 211 RKDEAIGQAFNIGFGVETSILD-------LAKAIIKLVGSSSRI--NVQPRTAEPFRSYP 261 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK +G+ P+ ++ SGL T+ W+ N Sbjct: 262 DISKAMRVLGFKPKYDLFSGLRATIDWFRRN 292 >gi|237785663|ref|YP_002906368.1| UDP-glucose 4-epimerase [Corynebacterium kroppenstedtii DSM 44385] gi|237758575|gb|ACR17825.1| UDP-glucose 4-epimerase [Corynebacterium kroppenstedtii DSM 44385] Length = 330 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 42/328 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG++G + + L+ V VID LT GN + + E + +F++ D+ Sbjct: 1 MKILVTGGAGYVGGTVAKVLLEQGH-SVTVIDDLT-TGNTDLIPEGA-----NFVRGDV- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ L + + D + +FAA S V S+ ++ N++ T LL+ R Sbjct: 53 -RDVAADVLADEKFDGVAHFAARSLVGESVERPQDYWHHNVVTTLTLLDAMR-------H 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F ST YG + +E+ P P++PY ATK + D+++ ++ H +G+ Sbjct: 105 SHVNNLVFS--STAATYGEPETVPITEEFPTRPTNPYGATKLAIDHMITSYAHAFGLRAT 162 Query: 181 LSNCSNNYGPYH-------FPEKLIPLAITRMI---EGSHVF----LYGDGQNVRDWLYV 226 N G YH +IP+ + + +G +F DG VRD+++V Sbjct: 163 SLRYFNVAGAYHGQGENRPVETHIIPIILQVALGHRDGVKIFGDDWPTKDGTCVRDYIHV 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +D A L L+ + G+ YN+G + +++ + K H Sbjct: 223 KDLADAHLLALETNKPGQHRMYNLGSGDGYSVREVI--------EMCRKVTGHPIPADIA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S K + E+GW P Sbjct: 275 PRRAGDPAILIASSDKARHELGWNPTHT 302 >gi|194288727|ref|YP_002004634.1| NAD-dependent epimerase/dehydratase; dtdp-glucose 4,6-dehydratase; udp-glucuronate decarboxylase 3 [Cupriavidus taiwanensis LMG 19424] gi|193222562|emb|CAQ68565.1| putative NAD-dependent epimerase/dehydratase; putative dTDP-glucose 4,6-dehydratase; Putative UDP-glucuronate decarboxylase 3 [Cupriavidus taiwanensis LMG 19424] Length = 342 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 34/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + VL +D Y G ++ + F L+ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVRAGQ-DVLCVDNF-YTGTKENIAHLLGRTNFELLRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G +L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQHDPVQTTKTSVNGAINML----------GLA 108 Query: 122 KKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + +G + P S Y K ++ L + + +G Sbjct: 109 KRLRARILQASTSEVYGDPEHHPQQEGYWGHVNPVGIRSCYDEGKRCAETLFMDYHRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP P +++ IT+ + G + +YG+G R + YV+D V AL Sbjct: 169 LDVRIARIFNTYGPRMHPADGRVVSNFITQALTGQPLTVYGNGAQTRAFCYVDDMVDALV 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ G N+G E ++I + L A S S E+ D P H R Sbjct: 229 RLMEAPASGTPVNLGNPCETTMLEIAQAV---LRAT--GSPSRIEMRPLPADDP-HQR-- 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +GW P +E GL +TV ++ Sbjct: 281 CPDITLARQLLGWEPTTALEQGLRRTVDYF 310 >gi|86152019|ref|ZP_01070232.1| NAD dependent epimerase/dehydratase family [Campylobacter jejuni subsp. jejuni 260.94] gi|315124877|ref|YP_004066881.1| NAD dependent epimerase/dehydratase family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|56783477|emb|CAI38730.1| nucleotidyl-sugar pyranose mutase [Campylobacter jejuni] gi|85841127|gb|EAQ58376.1| NAD dependent epimerase/dehydratase family [Campylobacter jejuni subsp. jejuni 260.94] gi|315018599|gb|ADT66692.1| NAD dependent epimerase/dehydratase family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 318 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 43/338 (12%) Query: 1 MRLI-VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+I +TGG GF+GS LC+ L+++ +++ +D Y G + ++KE+ ++ F+F++ DI Sbjct: 1 MRVILITGGTGFLGSNLCKRLLSEGN-KIICVDN-NYTGRMENIKELLENENFTFIEHDI 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSC 117 C+ I L D I NFA + + G T T++ G +LE Sbjct: 59 CEPLKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA------ 106 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLA 170 K+ LQ ST EVYG D + ++ Y NP + Y K ++ L Sbjct: 107 ----KEHNATILQASTSEVYG--DPLIHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFD 160 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + G+ + + N YG P +++ I + + G + +YGDG R + YV+D Sbjct: 161 YHRHEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGLQTRSFCYVDD 220 Query: 229 HVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + + V+ + N G +E F I L +I K+ S +++I +D Sbjct: 221 LINIIIKVMNSSKDFQGPINTGNPSE-------FTIKELAQKVIEKTGSKSKII--YKDL 271 Query: 288 PGHD-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 272 PSDDPTQRRPDISLAKTKFNWEPKINLDEGLEKTIKYF 309 >gi|225021246|ref|ZP_03710438.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii ATCC 33806] gi|224945979|gb|EEG27188.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii ATCC 33806] Length = 342 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + + ++D + GN +++ + + ++ DI Sbjct: 14 MKLLVTGGAGYVGS-VCATVLLEQGHDITIVDNFS-TGNRDAVPANA-----TLIEGDI- 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ L D +V+FAA S V S+ +++ N + T LL+ R Sbjct: 66 -RDVAGDVLAGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMRAHGVT--- 121 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG D+ +EDMP P++PY A+K + DY + ++ H +G+ Sbjct: 122 ------NLVFSSTAATYGEPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGAT 175 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + +F++G DG +RD++++ Sbjct: 176 SLRYFNVAGAYGSVGENREVETHLIPLVLQVALGHRDEIFIFGDDYPTKDGTCIRDYIHI 235 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +D A L L+ G +N+G G + ++ ID E+ H + Sbjct: 236 KDLADAHVLALESNTPGTHRIFNLGSGDGYSVKEVIDKCREV-----------TGHPIPV 284 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S++ K+E+GW P Sbjct: 285 TMAGRRAGDPAVLIASSARAKAELGWQPSRT 315 >gi|170078322|ref|YP_001734960.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7002] gi|169885991|gb|ACA99704.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7002] Length = 330 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 158/343 (46%), Gaps = 44/343 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L +V+V+D L Y G+ + + + ++ L + D DR Sbjct: 6 VLVTGGAGYIGSQAVLSL-QRRGYRVIVLDNLVY-GHQDLVASVLKAEL---IVGDTGDR 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + DA+++FAA ++V S+ ++ N++GT LLE + Sbjct: 61 PLLDQIFADHKIDAVMHFAAYAYVGESVTAPGKYYRNNVVGTLTLLE-------AMVAAG 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 QF F ST YG + E P NP +PY +K + ++ + YG+ ++ Sbjct: 114 VKQFVF--SSTCATYGEPSEIPIPEAHPQNPINPYGMSKLMVEKMLWDFDRAYGLRSVMF 171 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ + + G H PE LIPL + + + + ++G DG VRD+++V Sbjct: 172 RYFNAAGADPNGHLGEDHNPETHLIPLVLFAALGKRDSISIFGTNYPTPDGTCVRDYIHV 231 Query: 227 EDHVRALYL---VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L L++G + E +N+G N F + +++A + + E+ Sbjct: 232 SDLADAHVLGLEYLRQGGVTEAFNLGNGNG-------FSVKEVIEAA--RKITAKEIKAI 282 Query: 284 IED-RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 D RPG S K ++ +GW PQ ++E+ L W+ Sbjct: 283 ATDRRPGDPPSLVGSSEKARTVLGWQPQYADLETILQHAWHWH 325 >gi|166713824|ref|ZP_02245031.1| nucleotide sugar epimerase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 321 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGE-AVVGLDNYNRYYDPQLKHDRVAALCPGVDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDETQPKRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V+D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVDDIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSSEPVPHRMFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTQRAQAAFGFDPATPVERGLPQVVNW 312 >gi|71736169|ref|YP_273230.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556722|gb|AAZ35933.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 360 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 91/341 (26%), Positives = 155/341 (45%), Gaps = 36/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG GF G C +L N + QV L + +EI + + + DICD Sbjct: 15 KVLVTGHTGFTGGWACLWL-NSIGAQVAGY-SLAPETKPSLFEEIGLEDDVTSVLGDICD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + A++ FQPD I++ AA+ V RS + N GT +LE RL Sbjct: 73 FDKLLQAVEAFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARL-------- 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY----- 175 K L ++TD+VY + + + E+ P PYSA+KA+++ ++ ++G +Y Sbjct: 125 VKSVRGVLCVTTDKVYKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASYPFSQG 184 Query: 176 -GIPVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRA 232 G + + N G + E +LIP + + EG + L Y D R W +V V Sbjct: 185 LGPAIATARGGNIIGGGDWSEDRLIPDFVRAVNEGQVMTLRYPDA--TRPWQHVLALVHG 242 Query: 233 LYLVLK------KGRIGERYNIGGNNERK-NIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 ++L GR+ + +N+G ++ ++ V E L+ + L F++ Sbjct: 243 YLVILAGLLSENPGRVAKAWNLGPQELKQYSVRDVLE-------LMSADWQRPNL-EFMD 294 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + A+DSS ++++ W P N E + KT WY D Sbjct: 295 NPLPEAGALALDSSIARNQLNWIPVWNTEEVVEKTASWYRD 335 >gi|170692805|ref|ZP_02883967.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M] gi|170142461|gb|EDT10627.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M] Length = 343 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 138/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVTQGH-DVLCVDNF-YTGTKDNIAHLLDCPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDQIYNLACPASPIHYQHDPVQTTKTSVHGAINM----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R Q ST EVYG ED P P S Y K ++ L + + +G Sbjct: 109 KRVKARIFQASTSEVYGDALVHPQKEDYWGHVNPIGPRSCYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + + G + LYGDG R + YV+D + A Sbjct: 169 LSIRIARIFNTYGPRMHPTDGRVVSNFMMQALRGEPITLYGDGSQTRSFCYVDDMIDAFI 228 Query: 235 LVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G +E +I I I S S EL D P H + Sbjct: 229 RLMNSADDPGGPVNLGNPHEVSMREIAQRI-----VAITGSNSPLELHPLPTDDPWHRQ- 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +GW PQ +++ GL T ++ Sbjct: 283 --PDISRARELLGWQPQTSLDDGLQHTARYF 311 >gi|227892776|ref|ZP_04010581.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] gi|227865417|gb|EEJ72838.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] Length = 330 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVREGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLKAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P NP +PY TK + ++AW GI Sbjct: 106 DAGTKYLVFS-SSAATYGIPKKLPITEDTPLNPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ G H PE LIP + + G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGASSDGKIGEDHAPETHLIPNILKSALSGDGKFTIFGDDYNTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK K + +N+G + N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K ++ +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTVLGWKPKHENVDDVIATAWKWH 320 >gi|188993432|ref|YP_001905442.1| putatively exported UDP-glucuronate 4-epimerase [Xanthomonas campestris pv. campestris str. B100] gi|167735192|emb|CAP53404.1| putatively exported UDP-glucuronate 4-epimerase [Xanthomonas campestris pv. campestris] Length = 321 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGE-NVVGLDNYNSYYDPQLKHDRVAALCPQIDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRAGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNVLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVADIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDAPSSEPVPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKV-YRPMQPGDMV 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+S+ ++ G+ P +E GL + V W Sbjct: 282 RTMADTSRAQAAFGFDPATPVELGLPQVVEW 312 >gi|148656517|ref|YP_001276722.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148568627|gb|ABQ90772.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 313 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 142/331 (42%), Gaps = 36/331 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ + +V V D + G ++K + ++ D+ D Sbjct: 4 VLVTGGAGFIGSHLVEALLRRGE-RVRVFDNFS-TGRHENVKHLHDD--IELIEGDLRDF 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLWWSCLS 119 + +R A+ + + + AA + V RS+ D+ +TTN + GT +L R Sbjct: 60 DAVRRAVAGVE--VVFHQAALASVQRSV---DDPMTTNAVNVTGTLHVLMAAR------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + S+ VYG E P SPY+ +K + + +A+ YG+P Sbjct: 108 --DAGVRRVVFASSSSVYGDTPTLPKVETQAPQPLSPYAVSKLAGEQYCMAFSVVYGLPS 165 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV-RALY 234 + N +GP P +IP I RM+ G +YGDG RD+ Y+E+ V L Sbjct: 166 IALRYFNVFGPRQDPHSEYAAVIPRFIDRMVRGLPPIIYGDGLQSRDFTYIENVVDANLA 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPGHDRR 293 +N+G +D+ +I +L + L P + R G R Sbjct: 226 AADAPASCSTVFNVGAGERTSLLDLAAQINHVLGSRLTPDHH---------PPRAGDVRH 276 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +G+ P+ + GL +T+ W+ Sbjct: 277 SLASIEAISQTLGYAPRITLAEGLARTIEWF 307 >gi|33240764|ref|NP_875706.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238293|gb|AAQ00359.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 341 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 48/352 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNL--F 52 +++TG AGFIG+AL + L+++ + +V+ ID L YA L ++ SQ L + Sbjct: 4 VLITGAAGFIGAALVKKLLSEGE-RVIGIDNINEYYDTSLKYA-RLQYIESSSQEYLKNW 61 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F ++ I + + I+ + P +VN AA++ V S+ ++ +N++G LLE R Sbjct: 62 VFHKLGIENIDEIKEIFTKESPRIVVNLAAQAGVRYSLDNPHAYVQSNLVGFCNLLEMCR 121 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 + + + S+ VYG F+E N P S Y+ATK S++ + + Sbjct: 122 HY---------EVENLIYASSSSVYGGNTNLPFNETQAVNHPVSFYAATKKSNELMAHTY 172 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 H Y +P YGP+ P+ + P+ + I EG + ++ G+ RD+ Y++D V Sbjct: 173 SHLYDLPATGLRFFTVYGPWGRPD-MAPMKFAKAILEGDPIQVFNFGRMKRDFTYIDDVV 231 Query: 231 ----RALYLVLKKGRIGERYNIG-------------GNNERKNIDIVFEIGFLLDALIPK 273 R YL ++ N GN++ +DI L+ K Sbjct: 232 ESIFRCCYLQATVNNNFDKSNPDPCTSFAPHRIFNVGNSQPTELDIFIN-------LLEK 284 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 S S + + +PG A D+ K+K G+ P ++E G+ WYL Sbjct: 285 SLSTKAIRDLLPMQPGDVVATAADTQKLKDWTGFSPSTSLEDGIQCFAEWYL 336 >gi|320100841|ref|YP_004176433.1| NAD-dependent epimerase/dehydratase [Desulfurococcus mucosus DSM 2162] gi|319753193|gb|ADV64951.1| NAD-dependent epimerase/dehydratase [Desulfurococcus mucosus DSM 2162] Length = 321 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 23/326 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R IVTGGAGFIGS L YLV L+ +V++ID L+ +G+L ++K + + ++ D+ Sbjct: 3 RFIVTGGAGFIGSHLVDYLVERLRAEEVIIIDNLS-SGSLVNIKGHLEKGVARLVEADLV 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 A ++ D + ++AA V S + N++ TF +LE R+ Sbjct: 62 REGEWVKAFRDV--DIVFHYAANPEVRVSTVEPRIHFDNNVVATFNVLEAMRV------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ VYG ED P P S Y A+K +S+ L+ A+ YG L Sbjct: 113 --SDVKGIVFASSSTVYGEPSVIPTPEDHPLKPISVYGASKLASEALIQAYCELYGFKAL 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLV--- 236 + +N G ++ + S + + GDG + +L+V D V A ++LV Sbjct: 171 ILRYANIIGARSNHGVIVDFINKLRADPSRLEILGDGTQRKSYLHVSDAVEATMHLVASR 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR--PGHDRRY 294 L R E YNI GN + + + +I ++D + KS + + R PG + Sbjct: 231 LGAARGAEVYNI-GNRDWVTVTEIADI--VVDEMGLKSVEYVFKRTTPDGRGWPGDVKLM 287 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKT 320 +D+ +++S +GW P+ + + K Sbjct: 288 LLDTKRLES-LGWRPKLSSRDAVRKA 312 >gi|312973729|ref|ZP_07787901.1| wbnF [Escherichia coli 1827-70] gi|310332324|gb|EFP99559.1| wbnF [Escherichia coli 1827-70] Length = 331 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 40/343 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQVDIC 60 +VTG AGFIGS + + L+ D QV+ ID L Y NL + ++ +S F+F ++++ Sbjct: 1 MVTGAAGFIGSHVSKRLL-DAGHQVVGIDNLNDYYDVNLKLARLDLLKSGNFTFHKMELA 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + + + +++ AA++ V S+ + N++G +LE R Sbjct: 60 DREAMAALFASEKFERVIHLAAQAGVRYSLENPHAYADANLVGHLNVLEGCR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGIPV 179 K Q L S+ VYG K FS D + P S Y+ATK +++ + + H Y +P Sbjct: 112 HNKVQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLYNLPT 170 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV--- 236 YGP+ P+ + MIEG + +Y G+ RD+ Y++D A+ + Sbjct: 171 TGLRFFTVYGPWGRPDMALFKFTKAMIEGKSIDVYNYGKMKRDFTYIDDIAEAIIRLQDV 230 Query: 237 ---------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++ G YNIG ++ ++++ I L +AL ++ + I Sbjct: 231 IPQADADWTVETGSPATSSAPYRVYNIGNSSP---VELMDYITALEEALGKEAEKNMMPI 287 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG + D+ + IG+ PQ +++ G+ V WY Sbjct: 288 -----QPGDVLETSADTKALYDVIGFKPQISVKDGVKNFVDWY 325 >gi|258645455|ref|ZP_05732924.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260402806|gb|EEW96353.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 306 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 153/333 (45%), Gaps = 36/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS L L+ ++ +ID L+ +G + L + ++ FL++DI Sbjct: 1 MKILITGGAGFIGSHLSDALLA-AGHEITIIDDLS-SGTKDFLPKEAE-----FLKMDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSI----LGADEFITTNIIGTFILLEETRLWWS 116 D E + KE D I + AA++ V SI L AD NI G +LE R Sbjct: 54 D-EKLTDIFKERHFDIIYHEAAQTMVPASIDNPYLDAD----INISGMLRVLEAAR---- 104 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K D + + S+ VYG +E++ PSS Y TK ++ + + Y Sbjct: 105 -----KTDVQKIIFSSSAAVYGDNPALPLTENLIPAPSSFYGLTKWMTEKYLALYHKIYE 159 Query: 177 IPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + SN YGP + +I + + E + ++GDG+ RD++ V D + A Sbjct: 160 LSYTVLRYSNVYGPRQGADGEGGVIYIFAKSLAENKPITIFGDGRQTRDFISVHDVISAN 219 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + GE N+ E + L +I + +L+R+ R G R Sbjct: 220 LAALHQAD-GEIINVSTETE-------LSLNDLASKMIAAAGCSEDLLRYGPPRTGDIYR 271 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + K K+ + W P N++ GL +T+ ++ D Sbjct: 272 SCLSNQKAKTLLHWTPSRNIKDGLTETIHFFQD 304 >gi|218134467|ref|ZP_03463271.1| hypothetical protein BACPEC_02370 [Bacteroides pectinophilus ATCC 43243] gi|217989852|gb|EEC55863.1| hypothetical protein BACPEC_02370 [Bacteroides pectinophilus ATCC 43243] Length = 331 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 140/336 (41%), Gaps = 35/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGG GFIGS + L+ + V VID + N + NL + ++DI Sbjct: 1 MVSLVTGGCGFIGSHIVDRLLAEGH-TVRVIDNFSTGRPANLDHQKGNPNL-TIYEMDIR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E I + D I + AA + + SI ++ ++N++GT+ + E R Sbjct: 59 NKEQIEPVFEGV--DYIFHMAALADIVPSIQRPWDYFSSNVLGTYNVCECAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + ++ YG D+ E P PY+ TK + VL WG YG+PV+ Sbjct: 109 -AAGIRKLVYAASSSCYGIPDEYPTKETAEIRPQYPYALTKRLGEETVLHWGQCYGLPVV 167 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YG + + + + + G + G G+ RD+ YV D A Y Sbjct: 168 TLRLFNVYGTRSRTSGTYGAVFGVFLAQKLAGEPFTVVGTGEQTRDFTYVTDVADAFYTA 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + + +N+G + + L + L E+I I RPG Sbjct: 228 AMSDIVNDTFNVGSGG-------TYSVNRLCELL------GGEIIH-IPKRPGEPDCTFA 273 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D++KI+ + W +E G+ K LDN +WR Sbjct: 274 DTTKIEKALNWHAHVTLEEGVQKI----LDNIDYWR 305 >gi|206602064|gb|EDZ38546.1| DTDP-glucose 4,6-dehydratase [Leptospirillum sp. Group II '5-way CG'] Length = 313 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V GG GFIGS L ++ D ++ +D L+ G+ +K S+ + FL+ D+ Sbjct: 3 KIMVGGGCGFIGSNLIARIL-DGGVRATAVDNLS-TGHPQRMK----SDRYQFLKGDLSS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RS +E +PD ++ A + + G + + F LL R ++ Sbjct: 57 SRFTRSVFQEVRPDCYIHVAG---LADPLPGGKDPVHDIEKSVFPLLNVLRSL-----EE 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 F+ +ST EV+G + L E P S Y + ++ + + +P + Sbjct: 109 SGGAGHFILVSTGEVFGGENTPLPGEKETPVPDSSYGVSYLMMEHYLSVYAPRLKMPFSI 168 Query: 182 SNCSNNYGPYHFPEKLIPL------AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 S YGP E AI R +G L G+G +RD++YV+D V ALY Sbjct: 169 VRLSPVYGPGQSLEGETGQMTFWIRAILRQDKGEIPRLTGNGMRIRDFIYVQDAVDALYA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTELIRFIEDRPGHD 291 + +G G +++G E D+ ++ G +D SY++ R + GH Sbjct: 229 LALEGNTGV-FHLGSGIEASERDVFSKMRQASGIPVDISYENSYNNGPQKRIL----GHQ 283 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R ++ E+GW P +E G+++TV W+ Sbjct: 284 R--------LEEELGWSPATTLEEGVSQTVSWF 308 >gi|307942001|ref|ZP_07657353.1| UDP-glucuronate 5'-epimerase [Roseibium sp. TrichSKD4] gi|307774791|gb|EFO34000.1| UDP-glucuronate 5'-epimerase [Roseibium sp. TrichSKD4] Length = 355 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 35/347 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-------EISQSNLF 52 ++++TG AGFIG L R+++N + V ID LT Y NL + S SN F Sbjct: 18 KILITGVAGFIGFHLARHMLNAGWV-VAGIDGLTDYYDVNLKRKRLSILHGAGGSGSNNF 76 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + D + ++ ++F+PD +V+ AA++ V S+ +I N++GTF ++E R Sbjct: 77 QFHHNMLEDADKVQQVFEDFRPDVVVHLAAQAGVRYSLENPRAYIDANLVGTFNVMEGVR 136 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAW 171 + K Q FL ST VYG+ F+E+ + + Y+ATK +++ ++ ++ Sbjct: 137 --------ELKPQ-HFLAASTSSVYGANTVMPFTENQRTDHVLTLYAATKKANESMLHSY 187 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + +P + YGP+ P+ + + + + +YG+G RD+ Y++D V Sbjct: 188 AHLWKLPTTVFRFFTVYGPWGRPDMALFKFVKATLADEPIDVYGEGNMQRDFTYIDDLVE 247 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDI----VFEIGFLLDALIPKSYSHTEL------ 280 ++ LV + G+ GN E + V IG + + H E Sbjct: 248 SIARLVDAVPQAGQPV---GNVEDSLSPVAPYRVVNIGGGRPVGLMEFIEHMETELGKPA 304 Query: 281 IRFIEDRPGHDRRYAIDSSK-IKSEIGWFPQENMESGLNKTVCWYLD 326 IR + D R + S++ +++ G+ P+ ++ +G+ V WY D Sbjct: 305 IRNMMPMQKGDVRETVASAELLEALTGYCPRTDVATGVRSFVKWYRD 351 >gi|52082565|ref|YP_081356.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787960|ref|YP_093789.1| hypothetical protein BLi04283 [Bacillus licheniformis ATCC 14580] gi|319648442|ref|ZP_08002658.1| hypothetical protein HMPREF1012_03697 [Bacillus sp. BT1B_CT2] gi|52005776|gb|AAU25718.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52350462|gb|AAU43096.1| hypothetical protein BLi04283 [Bacillus licheniformis ATCC 14580] gi|317389521|gb|EFV70332.1| hypothetical protein HMPREF1012_03697 [Bacillus sp. BT1B_CT2] Length = 333 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 54/352 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ D V+V+D NL + + + F + D+ Sbjct: 1 MSVLVLGGAGYIGSHAVYQLI-DRGENVVVVD------NLETGQRQAVHPDAIFYEGDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ +R+ ++ + + +++FAA S V S+ ++ N+ GT +LL+ + L Sbjct: 54 DRDFLRTVFEKERIEEVIHFAASSLVGESMKDPLKYYDNNVSGTQVLLQ------AMLEH 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K + + ST VYG + +EDMP P+S Y TK + L+ +GI Sbjct: 108 DVK---KIVFSSTAAVYGEPESLPITEDMPTMPTSTYGETKLIMEKLMKRTEEAHGISFV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+PL + T + + H+ ++G DG +RD++ Sbjct: 165 SLRYFNVAGARETGEIGEDHRPETHLVPLILQTALGQRPHITIFGDDYDTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +VED H+ AL L+KG + +N+G + F + ++DA + + ++ Sbjct: 225 HVEDLIDAHLSALDY-LRKGGKSDIFNLGSSEG-------FSVKEMIDA--ARKATGKDI 274 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 I R D I S K K +GW P +V +++ W W Sbjct: 275 TAEIGKRRAGDPSILIAGSHKAKQVLGWRPSRT-------SVAKIIEDAWKW 319 >gi|198282896|ref|YP_002219217.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666879|ref|YP_002425098.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247417|gb|ACH83010.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519092|gb|ACK79678.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 337 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 40/345 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQV 57 R++VTG AGFIG LCR L+ + I V +D L A + L + F F V Sbjct: 4 RILVTGAAGFIGYHLCRRLLTEGWI-VHGLDNLNAYYDPALKRDRLAHLENHPDFQFHTV 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + D +VN AA++ V S+ ++ +N++G +LE C Sbjct: 63 DLADREAMTGLFAGPHFDVVVNLAAQAGVRHSLQDPAAYVDSNLVGFANVLE------GC 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +Q D F S+ VYG+ + +S D +P S Y+A+K + + + ++ H +G Sbjct: 117 RAQ-AVDHLLF--ASSSSVYGANARLPYSVHDGVDHPLSLYAASKRAGELMAHSYAHLFG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRA 232 IP YGP+ P+ +++ G + ++ GQ RD+ Y++D VR Sbjct: 174 IPCTGLRFFTVYGPWGRPDMAYFRFTRQILAGEPIPVFNHGQMRRDFTYIDDVIEGVVRL 233 Query: 233 LYLVLKKGRIG-ER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 L + + ER YNIG + +D I L D L K+ Sbjct: 234 LDFAPRPAPMSTERPDPSTSDAPFRLYNIGNHTPVALLDF---IAILEDLLARKAD---- 286 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I ++ + G D +++ +G+ P + GL + + WY Sbjct: 287 -IEWLPMQAGDVIATYADVGELQEAVGFSPATPLRDGLARFIDWY 330 >gi|91226615|ref|ZP_01261339.1| capsular polysaccharide biosynthesis protein [Vibrio alginolyticus 12G01] gi|91189089|gb|EAS75371.1| capsular polysaccharide biosynthesis protein [Vibrio alginolyticus 12G01] Length = 334 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 154/347 (44%), Gaps = 42/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-SLKEIS--QSNLFSFLQV 57 M+ +VTG AGFIGSA L N +V+ ID L ++N L +S + +F FL V Sbjct: 1 MKYLVTGAAGFIGSATVEKL-NAAGNEVVGIDNLNDYYDVNLKLARLSRIEHPMFKFLNV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + + D +++ AA++ V S+ + +N++G +LE C Sbjct: 60 DIADRSVMETLFSTEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILE------GC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 114 RQNDVK---HLVYASSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I +G + + +G RD+ +V+D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILDGETIDINNNGDMWRDFTHVDDIVEGVVR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D V I L K+ Sbjct: 230 ISDVLPARNDSWTVEDGTPASSSAPYAVYNIGHGSPINLMDFVKAIEDELGIEAKKN--- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E +PG + D+ + S G+ P+ ++ G+ + V WY Sbjct: 287 -----FREMQPGDVYQTYADTEDLFSATGYKPKVTVKEGVAEFVSWY 328 >gi|49480462|ref|YP_039440.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196036131|ref|ZP_03103531.1| UDP-glucose 4-epimerase [Bacillus cereus W] gi|218906631|ref|YP_002454465.1| UDP-glucose 4-epimerase [Bacillus cereus AH820] gi|228918062|ref|ZP_04081591.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930457|ref|ZP_04093457.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228949172|ref|ZP_04111441.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124953|ref|ZP_04254128.1| UDP-glucose 4-epimerase [Bacillus cereus 95/8201] gi|254724109|ref|ZP_05185894.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A1055] gi|49332018|gb|AAT62664.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195991298|gb|EDX55266.1| UDP-glucose 4-epimerase [Bacillus cereus W] gi|218537541|gb|ACK89939.1| UDP-glucose 4-epimerase [Bacillus cereus AH820] gi|228658517|gb|EEL14182.1| UDP-glucose 4-epimerase [Bacillus cereus 95/8201] gi|228810517|gb|EEM56869.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829176|gb|EEM74813.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841605|gb|EEM86720.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 338 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|325571101|ref|ZP_08146673.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] gi|325156186|gb|EGC68372.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] Length = 343 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 144/329 (43%), Gaps = 45/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ K QV+VID L G+ ++ + +F + DI Sbjct: 12 MAILVLGGAGYIGSHAVDQLIEQGK-QVVVIDNL-LTGHRQAIHPAA-----TFYEGDIR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ ++S ++ D +++FAA S V S+ ++ N+ G +LLE Sbjct: 65 DKAFLQSVFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVM--------- 115 Query: 121 DKKDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K+ Q + + ST YG D +E+ P NP +PY +K + ++ YG+ Sbjct: 116 -KEHQVKHIVFSSTAATYGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKY 174 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 V + + G H PE L+P+ + + + V ++G DG VRD+ Sbjct: 175 VALRYFNVAGAKSDASIGEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTPDGTCVRDY 234 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++VED + A L L+KG +N+G N+ ++V + IP Sbjct: 235 VHVEDLIAAHLLALEYLQKGNESNVFNLGSNHGYSVKEMVEAARNVTKKEIPA------- 287 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R R G S K + +GW P Sbjct: 288 -RVAPRRAGDPSTLVASSEKARKVLGWKP 315 >gi|297622541|ref|YP_003703975.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297163721|gb|ADI13432.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 355 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 149/336 (44%), Gaps = 30/336 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFLQV 57 +VTG AGFIGS L L+ L+ +V+ +D G+ ++L E+ ++ + F++ Sbjct: 26 LVTGAAGFIGSHLLETLLK-LEQRVVGLDNFA-TGHRHNLDEVQRAVGEAAWSRLRFIEG 83 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWW 115 DI D R AL DA+++ AA V SI D + +N+ G LL Sbjct: 84 DISDLATCREALAGV--DAVLHQAAFVSVPGSI--EDPLLNHRSNVTGFLNLL------- 132 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++ ++ RF+ S+ VYG+ + E+ + SPY+A+KA + + + Sbjct: 133 --VAAQERGLKRFVYASSSAVYGNAETLPAREEAVGDALSPYAASKAMDELYAGVFTRLH 190 Query: 176 GIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + N +GP P +IP R++ G ++GDG RD+ +V + V+ Sbjct: 191 GLEAIGLRYFNIFGPRQDPNGAYAAVIPKWTARLLSGQRGVIFGDGSATRDFCFVGNVVQ 250 Query: 232 ALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 A L GE +N+G + + L + + RF RP Sbjct: 251 ANVLAATTENPAAFGEVFNVGNGGATTTRALYETLRDRLAEVTGREDLRRLEPRFDPPRP 310 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G D S+ + +G+ P ++E GL +T+ WY Sbjct: 311 GDIAHSRADISRAQRLLGFEPDVSVEEGLRRTLAWY 346 >gi|325917535|ref|ZP_08179738.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas vesicatoria ATCC 35937] gi|325536251|gb|EGD08044.1| nucleoside-diphosphate-sugar epimerase [Xanthomonas vesicatoria ATCC 35937] Length = 321 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ CR L + V+ +D Y L + + +D Sbjct: 1 MTILVTGAAGFIGAYTCRALAARGE-NVVGLDNYNSYYDPQLKRDRVAALCPQIDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP +V+ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEIQPSRVVHLAAQAGVRYSLENPSAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMGYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLIFSRAVLAGRPIEVFNHGKMQRDFTFVADIVAGVLGA 229 Query: 237 LKKGR---IGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L I R +N+G + E+ + +D + + E + + +PG Sbjct: 230 LDTPSGEAIPHRVFNLGNHTP-------VELEYFIDVIAQAAGRPAEKL-YRPMQPGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + ++ G+ P +E GL + V W Sbjct: 282 RTMADTRRAQAAFGFDPATPVERGLPQVVDW 312 >gi|148652789|ref|YP_001279882.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1] gi|148571873|gb|ABQ93932.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1] Length = 357 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 99/373 (26%), Positives = 154/373 (41%), Gaps = 67/373 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------ND-----LKIQVL-----VIDKLTYAG 38 M+++VTG AGFIG +C+ L+ ND LK+ L +D T Sbjct: 1 MKILVTGAAGFIGFHVCQKLLARGDQIIGVDNLNDYYDVSLKMARLSELGVTLDAETMTA 60 Query: 39 NLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT 98 + +S S +N F F+++DI DR + S E Q DA+ + AA++ V SI ++ Sbjct: 61 DHSSRDSTSSAN-FEFIKLDIADRAAMESLFAEHQFDAVCHLAAQAGVRYSIENPHVYVE 119 Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPY 157 TN++G +LE R Q D F S+ VYG F + D +P S Y Sbjct: 120 TNVVGFLNILEGCR-------QHNVDNLCF--ASSSSVYGLNQSQPFKTSDHTDHPVSLY 170 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGD 216 +ATK S++ + + H +GI YGP+ P+ + P+ I + + ++ Sbjct: 171 AATKKSNEMMAHTYAHLFGIRCTGLRFFTVYGPWGRPD-MAPMLFADAISNNRPIKVFNH 229 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGR----IGER------------------YNIGGNNER 254 G RD+ YV D + +L +G YNI GNN Sbjct: 230 GDMSRDFTYVGDIAEGILAILDTPAGSKDVGAPTFDPRHPSPETSSAPYRLYNI-GNNSP 288 Query: 255 KNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENM 313 N+ + L+A TE + + D +PG DSS + G+ P + Sbjct: 289 VNLMVFIRT---LEAEF-----GTEAQKIMMDMQPGDVASTYADSSSLTQLTGFTPNTEL 340 Query: 314 ESGLNKTVCWYLD 326 G+ WY D Sbjct: 341 AEGIKHFANWYRD 353 >gi|309789950|ref|ZP_07684526.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] gi|308227970|gb|EFO81622.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] Length = 320 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 148/333 (44%), Gaps = 30/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEIS---QSNLFSFLQ 56 M +VTGGAGFIGS L L+ + QV+ +D T Y L I+ Q + + Sbjct: 1 MTYLVTGGAGFIGSHLVETLLRRGE-QVVCLDNFTPYYDPLRKQHNIAWAMQQPGYILEE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + + ++ + + AA SI + N+ GT LLE R + Sbjct: 60 ADLRDPSALAAIFATYRLTHVAHLAAMPGPRPSIADPALYEAVNVGGTVRLLELARQYGV 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTY 175 +F+ ST VYG +K F ED P SPY+ATK +++ L + Y Sbjct: 120 E---------QFVLASTSSVYGKAEKLPFEEDDRTDQPLSPYAATKKAAEVLAYTFHSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALY 234 +P+ + YGP P+ L + +M+ G L+ G N+ RD+ YV+D V + Sbjct: 171 AMPMSVVRFFTVYGPRGRPDMTPYLFVDKMVRGEPFVLFNRGINLFRDYTYVDDIVAGVV 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L + + +N+G + + +++ +G LL+ + T IEDRP Sbjct: 231 AALDRPAGYQIFNLGNS---QPVEMCRFVG-LLEQI-------TGYPAQIEDRPLPATEP 279 Query: 295 AI---DSSKIKSEIGWFPQENMESGLNKTVCWY 324 I ++K + + + P+ +E GL + WY Sbjct: 280 PITFASTAKAQQMLDFAPRTPVEVGLERFWDWY 312 >gi|259414743|ref|ZP_05738666.1| NAD-dependent epimerase/dehydratase family protein [Silicibacter sp. TrichCH4B] gi|259349194|gb|EEW60941.1| NAD-dependent epimerase/dehydratase family protein [Silicibacter sp. TrichCH4B] Length = 345 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 58/356 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS-----LKEISQSNLFSFL 55 ++VTG AGFIG L + L+ V+ +D + Y +L L++++ F+ Sbjct: 4 VLVTGSAGFIGFHLSKLLLEH-GAHVIGLDAFSDYYDVSLKERRHAMLEDVAGQGTGRFV 62 Query: 56 QV--DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 V I + L + PD +V+ AA++ V SI ++ +N++GTF LLE R Sbjct: 63 PVIGRIETPGLLADLLSSYNPDIVVHLAAQAGVRHSIENPRSYLQSNLMGTFELLEAAR- 121 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDY 166 + K L ST YG+ + +MPY + S Y+ATK S+++ Sbjct: 122 -----AHPPK---HMLLASTSSAYGA------NTNMPYQETQKADHQMSFYAATKKSTEH 167 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + ++ H + +PV + YGP+ P+ + ++EG + +Y G RD+ YV Sbjct: 168 MAHSYAHLFELPVTMFRFFTVYGPWGRPDMALFKFTKAILEGRPIDVYNHGDMQRDFTYV 227 Query: 227 EDHVRALYLVLKK-------GRIGER-----------YNIGGNNERKNIDIVFEIGFLLD 268 ED V A+ L++ + E NIG +N + D + Sbjct: 228 EDLVEAIRLLMAARPERPCDAHVPEGDSLSPVAPFRVVNIGNSNPVQLSDYI-------- 279 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + I ++ T + +PG D ++ G+ PQ ++E G+++ V WY Sbjct: 280 SAIERATGITAQRNLMPMQPGDVPATWADIQLLERLTGYTPQTSVEEGVSRFVAWY 335 >gi|270262149|ref|ZP_06190421.1| hypothetical protein SOD_b03560 [Serratia odorifera 4Rx13] gi|270044025|gb|EFA17117.1| hypothetical protein SOD_b03560 [Serratia odorifera 4Rx13] Length = 336 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ QV+ ID L + L+ +S + F F++ Sbjct: 1 MKFLVTGAAGFIGYHIAERLLAAGH-QVVGIDNLNDYYDVGLKMARLELLSDKSEFQFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E + +++ A++ V S+ + N+IG +LE R Sbjct: 60 LDLADREGMAGLFAEQKFQRVIHLGAQAGVRYSLENPLAYADANLIGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + L S+ VYG K F +ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 ---HNKVEHL--LYASSSSVYGLNRKLPFATEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--- 232 GIP YGP+ P+ + ++ G + +Y G+ RD+ Y++D A Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTKAILAGESIDVYNHGEMHRDFTYIDDIAEAIVR 230 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR----- 287 L V+ + G V+ IG + + E IE R Sbjct: 231 LQAVIPQADAAWTVEQGSPASSSAPYRVYNIGNSSPVKLMEYIRALEQALGIEARKNMLP 290 Query: 288 --PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG + D++++ IG+ P+ +E G+ + V WY Sbjct: 291 MQPGDVLDTSADTAELYRVIGFKPETGVEEGVKRFVEWY 329 >gi|222150924|ref|YP_002560077.1| capsular polysaccharide biosynthesis protein CapI [Macrococcus caseolyticus JCSC5402] gi|222120046|dbj|BAH17381.1| capsular polysaccharide biosynthesis protein CapI [Macrococcus caseolyticus JCSC5402] Length = 336 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/352 (24%), Positives = 161/352 (45%), Gaps = 48/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL----- 55 M+++VTG AGFIGS L + L + +V ID L N S+ E+ + L FL Sbjct: 1 MKILVTGIAGFIGSNLAKKL-KEKGHEVFGIDNLN---NYYSV-ELKKDRLSKFLNNEFK 55 Query: 56 --QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 ++++ + E ++ ++ +P+ ++N AA++ V S+ +I +N+ G +LE Sbjct: 56 NYEINLENYEAVKKVFEQEKPEVVINLAAQAGVRYSLENPFTYIQSNVNGFMSILE---- 111 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWG 172 +C + K+ + S+ VYG+ FS D +P S Y+ATK S++ + + Sbjct: 112 --ACRHNNVKN---LIYASSSSVYGANTSLPFSTSDNIDHPISLYAATKKSNELMAHTYS 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + +P YGP+ P+ + ++ + +Y +G +RD+ YV+D V A Sbjct: 167 HLFNLPTTGLRFFTVYGPWGRPDMALFKFTKNILNNESIDVYNNGNMMRDFTYVDDIVEA 226 Query: 233 LYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + ++++ + YNIG N K ++ + I K+ Sbjct: 227 ISRLVERPAQPNKEWSGDNPSPDSSYAPYKVYNIGNNAPVKLMEFIEAIETRTGIEAKKN 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+E + G + + + +I + PQ N++ G+N V WY++ Sbjct: 287 --------FMELQAGDVPQTYANVDDLFRDIDFKPQTNIQDGVNNFVDWYMN 330 >gi|149375129|ref|ZP_01892901.1| Nucleoside-diphosphate-sugar epimerase [Marinobacter algicola DG893] gi|149360493|gb|EDM48945.1| Nucleoside-diphosphate-sugar epimerase [Marinobacter algicola DG893] Length = 335 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIGS L L+ D +V+ +D + Y L L+ ++ F+ ++ Sbjct: 1 MKILVTGTAGFIGSHLAHRLL-DRGDEVIGVDNVNDYYDPTLKEARLERLTCKPGFTEVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR + + +E +P+ +V+ AA++ V S+ +I N++G +LE Sbjct: 60 KDVADRPAMEALFREHKPERVVHLAAQAGVRYSLENPHAYIDANLVGFTNILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG+ + FS D +P S Y+A+K +++ + + H Y Sbjct: 114 CRHNGVK---HLVYASSSSVYGANETMPFSIHDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + ++ G + ++ G + RD+ Y++D V + Sbjct: 171 NMPTTGLRFFTVYGPWGRPDMALFIFTKNILAGEPIDVFNHGHHRRDFTYIDDIVEGVIR 230 Query: 236 VLKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L GE YNIG NN E+ ++ +I + Sbjct: 231 TLDNVATPNPQWSGETPDPGTSKAPYRLYNIGSNNP-------VELSRFIE-IIEERVGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + + ++G+ P +E G+ V WY D Sbjct: 283 KAEKNLLPLQPGDVPATYANVDDLIDDVGYKPSTTVEEGIANFVDWYRD 331 >gi|73667578|ref|YP_303593.1| UDP-glucose 4-epimerase [Methanosarcina barkeri str. Fusaro] gi|72394740|gb|AAZ69013.1| UDP-glucose 4-epimerase [Methanosarcina barkeri str. Fusaro] Length = 308 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 143/328 (43%), Gaps = 29/328 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS L L+ D +V VID + GN+ +++ + + ++ I D Sbjct: 6 VVVTGGMGFIGSHLTERLLEDN--EVTVIDNES-TGNIENIRHLLDHENLTVIKGSIVDL 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K+ D + + AA V RS+ +NI GT +L ++D Sbjct: 63 N-LTEIFKD--KDYVFHLAAIPSVPRSVKDPFSSNNSNITGTLNVL--------TAAKDT 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + S+ VYG EDMP NP SPY+ TKA+ + + Y +P + Sbjct: 112 GIK-KLIFSSSSSVYGDTPTLPKREDMPINPMSPYAITKATGEMYCRVFQDLYDLPTVSL 170 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP P +IP IT ++ +YGDG+ RD+ +V+ V A L + Sbjct: 171 RYFNVFGPRQDPNSQYAAVIPKFITAILNDESPVIYGDGEQSRDFTFVKKVVDANILSCE 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G +NI +V + +L I ++ E RPG + D Sbjct: 231 SKKTG-VFNIACGRRITINQLVDYVNEILGKKIKSIHA--------EPRPGDIKHSLADI 281 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 SK K E G+ P N L W+L+ Sbjct: 282 SKAK-EFGYNPIGNFRDELKTVAEWFLN 308 >gi|269926289|ref|YP_003322912.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] gi|269789949|gb|ACZ42090.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] Length = 322 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 145/334 (43%), Gaps = 35/334 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAGF+GS LC LV D +VL ID L+ G + +L + + F F++ D+ Sbjct: 1 MRILVAGGAGFVGSNLCERLV-DQGHEVLCIDNLS-TGRIRNLANLLTHSRFCFIEHDV- 57 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I+ P D I + A+ + E + N GT LLE Sbjct: 58 ----IKGVPDTKYPVDRIYHLASPASPPGYQSRQIETLRVNSEGTLHLLELA-------- 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHT 174 +K R L ST EVYG + SE+ N P S Y K + L +A+ Sbjct: 106 --EKHGARLLYASTSEVYGDPLEHPQSEEYRGNVSSTGPRSMYDEGKRYGEALCMAFYRV 163 Query: 175 YGIPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + V + N YGP P +++P IT+ + + +YGDG+ R Y++D + Sbjct: 164 RQVDVRIVRIFNTYGPKSDPYDGRIVPSFITQALLNRPITVYGDGRQTRALCYIDDTIEG 223 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + +++ + GE N+G +E +D LI + + I F G D Sbjct: 224 MIRMMESEKTSGEVVNLGNPDEHSVLDYA--------RLIIELTGSSSEIHFQGPVVGDD 275 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK K + W P + GL +T+ ++ Sbjct: 276 PHRRCPDISKAKRLLDWAPCIPLSEGLPRTIEYF 309 >gi|168701834|ref|ZP_02734111.1| NAD-dependent epimerase/dehydratase [Gemmata obscuriglobus UQM 2246] Length = 319 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 41/342 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TG GF+G L +L++ ++ + + + L+ L + L++ VD+ Sbjct: 1 MRILITGITGFVGGHLVEHLMSLGGHELFGVSRRAEWPEGLSHLS--PHARLYA---VDL 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD ++E +PD + + A ++ S + N+ T L + Sbjct: 56 CDGAGTERVVRECRPDWVCHLAGYANTGGSFRDPERAWRENLTATRCLYDAV-------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R L +ST +YG D+ G+ E P+SPY+++KA++D + + + G+ Sbjct: 108 AGSGLKPRILFVSTGLIYGEPDEPDGVCDESTTLKPASPYASSKAAADLISYQYTRSAGL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV------FLYGDGQNVRDWLYVEDHVR 231 ++ N GP + +P R I + V GD RD V D V Sbjct: 168 DIVRVRLFNQIGPRQSADFAVP-NFARQIAAAEVGKQAPEVNVGDLSARRDVADVRDIVA 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A L+L+KG+ GE YN F I LLD L+ S ++ + IE PG Sbjct: 227 AFPLLLEKGQCGEAYNAARGES-------FLIQSLLDRLVAMSRVPIQVNQKIE--PGRK 277 Query: 292 RRYAI---DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 A+ D++K+++ GW PQ ++ L + N+W Sbjct: 278 ADTAVARADAAKLRTATGWAPQVTLDQSLAGVL------NYW 313 >gi|86742232|ref|YP_482632.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86569094|gb|ABD12903.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 316 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 37/333 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR IVTGGAGF+GS LC L+ +V+ D G +++ + F + D+ Sbjct: 1 MRAIVTGGAGFLGSHLCERLLGG-GYEVICFDNFI-TGRPENVEHLLADPRFRLVNRDVN 58 Query: 61 DRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + DA+++FA+ S VD L E + +GTF L Sbjct: 59 DFIYVSGPV-----DAVLHFASPASPVDYYELPI-ETLKVGSLGTF----------HALG 102 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++ RFL ST E YG +G + P P S Y K S+ + +A+ Sbjct: 103 LARQKNARFLLASTSESYGDPQVNPQPEGYWGNVNPVGPRSVYDEAKRFSEAVTMAYRRK 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP + + IP I++ + G + + GDG R YV+D + Sbjct: 163 HGVDTGIVRIFNTYGPRMRVDDGRAIPAFISQALRGEPITVAGDGTQTRSICYVDDLIDG 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + +L G NIG +E +D + L + P I F+ RP D Sbjct: 223 IVRLLHSDLPGP-VNIGNPHEMSILDTAVLVRDLCGSTAP--------ITFVP-RPQDDP 272 Query: 293 RY-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++ +GW P+ ++ GL +T+ W+ Sbjct: 273 SVRQPDITLARTLLGWEPKTSLHDGLTRTISWF 305 >gi|255261298|ref|ZP_05340640.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255263265|ref|ZP_05342607.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255103633|gb|EET46307.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255105600|gb|EET48274.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] Length = 327 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 52/333 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + D L G +++K F Q D+ DR Sbjct: 4 ILVTGGAGYIGSHACKALAA-AGYTPITFDNLV-TGWQDAVK------FGPFEQGDLLDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +QP+A+++FAA S V S++ ++ N++G+ L+E + C Sbjct: 56 AALDQVFAAYQPEAVMHFAALSQVGESMVHPGKYWRNNVVGSLTLIEAA-VAAGC----- 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 RF+ ST YG D L E+ P +P + Y A+K + + ++ + + G+ ++ Sbjct: 110 ---NRFVFSSTCATYGDQDNVLLDENCPQDPINAYGASKRAIEDILANYAESDGLESVIF 166 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ + G +H PE LIPL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPDGDVGEFHQPETHLIPLMLD-AIDGKRDALTIFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + D V A L +K +G+ + +N+G GF + +I S + T + Sbjct: 226 ICDLVDAHVLGIKWLEEGKGNQIFNLGTGT-----------GFSVREVIDASANVTNRVV 274 Query: 283 FIED---RPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + RPG + S + ++GW P + Sbjct: 275 PVAEGGRRPGDCTKLVSGSERASRDLGWQPSRS 307 >gi|238852727|ref|ZP_04643134.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 202-4] gi|238834654|gb|EEQ26884.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 202-4] Length = 330 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/345 (27%), Positives = 155/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS R L+ + V+V+D L Y G+ ++ + ++ F Q DI Sbjct: 1 MRVLVIGGAGYIGSHAVRKLIEEGN-DVVVLDSL-YTGHRKAVDKKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTNLVSKILRDENIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAM--------D 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +ED P +P +PY TK + ++ GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPKTLPITEDTPLDPINPYGETKMMMEKIMHWADKADGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAISGDGNFTIFGDDYDTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V++ + + +N+G N++I+ + IP + Sbjct: 225 QVEDLIDAHILALKHVMETNK-SDVFNLGTAQGYSNLEILEAAKKVTGIDIPYT------ 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + R G DSSK + +GW P+ EN++ + W+ Sbjct: 278 --IVPRRGGDPDSLVADSSKARKVLGWKPKHENVDDVIATAWNWH 320 >gi|116071755|ref|ZP_01469023.1| Putative nucleotide sugar epimerase [Synechococcus sp. BL107] gi|116065378|gb|EAU71136.1| Putative nucleotide sugar epimerase [Synechococcus sp. BL107] Length = 331 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 148/347 (42%), Gaps = 35/347 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVI-DKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+ +VTG GFIGS L L++ K ++ + + L G L+SL E S+ + L D Sbjct: 1 MKALVTGADGFIGSHLVEKLLSSGKDVKAFCLYNSLGSWGWLDSLPETSKEAIEVILG-D 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D C+R A++ D + + AA + S + +I TNI GT +++ R Sbjct: 60 IRDPICVREAMRGC--DQVFHLAALIAIPYSYVAPASYIDTNIHGTLNVVQAAR------ 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ST E YG+ +ED P SPY+A+K +D + L++ ++ P Sbjct: 112 ---DLGVTNLVHTSTSETYGTAQFVPITEDHPLVGQSPYAASKIGADQIALSYWRSFETP 168 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT++ G G RD+ +V D A + Sbjct: 169 VTVLRPFNTYGPRQSARAVIPTIITQIAAGHRKIKLGALSPTRDFNHVSDTCAAFQALAN 228 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RP--GHDR 292 +G+ N N FEI A + + EL ++ RP Sbjct: 229 CNSALGQIVNAASN---------FEISIGDTASLIAKAMNVELDIITDENRLRPEGSEVN 279 Query: 293 RYAIDSSKIKSEIGWFPQ----ENMESGLNKTVCWYLD--NNWWWRP 333 R D+S ++ W P+ + E G+ +T W+ + N +RP Sbjct: 280 RLFGDNSLLRQLTNWQPRYGGLDGFERGITETAEWFSNPANLALYRP 326 >gi|152983181|ref|YP_001353967.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] gi|151283258|gb|ABR91668.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] Length = 325 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 32/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS L L+ + +V+VID L + G+ ++L + F + D Sbjct: 12 ILVTGGAGFIGSHLVDGLLKEGAREVVVIDNL-FVGSEDNLNSALATGKVVFYRDDAELS 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K Q D + N A ++ ++ S L +TN+ LLE R Sbjct: 71 TSLDYIFKNHQIDVVFNCATKA-LNYSFLNPANAFSTNVTVVLNLLEIQR---------- 119 Query: 123 KDQFRFL-QISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F+ L ST EVYGS E P NP++ Y+A KA++D+ V ++ + + + Sbjct: 120 RGGFKTLCHFSTSEVYGSAVYEPMDEAHPKNPTTTYAAGKAAADHAVESYVRMFDLDAFI 179 Query: 182 SNCSNNYGPYH----FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 NNYGP +IP+ R++ G L+GDG RD++YV D V A+ + Sbjct: 180 VRPFNNYGPRQNYKGMLAGIIPITAWRILNGIAPELHGDGLQSRDFIYVHDTVDAVVKLY 239 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR---Y 294 K GE NI +N+ + L+P+ S I +PG + Sbjct: 240 DKMPAGESVNISTDNQ-----------ISISELLPRICSGMGYAGEIVKKPGRKSDVLCH 288 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + K+ I + + GL T+ WY N Sbjct: 289 LASNEKVHGMIDY-KLTPFDQGLRDTLAWYKAN 320 >gi|119944543|ref|YP_942223.1| dNTP-hexose dehydratase/epimerase [Psychromonas ingrahamii 37] gi|119863147|gb|ABM02624.1| dNTP-hexose dehydratase/epimerase [Psychromonas ingrahamii 37] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + + +V V D L+ G ++L + F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLASHGIKK-GYEVTVFDNLSRLGTTDNLAWLKTFGEFEFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + ++ +PDA+ + A + + S+ NI G+ +LE RL+ Sbjct: 60 NKNDVTRLIERVKPDAMFHLAGQVAMTTSLENPYMDFEVNIGGSINVLEAVRLY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLDK----------------GLFSEDMPYNPSSPYSATKASS 164 + ST++VYG L++ F E + + SPY +K S+ Sbjct: 114 --SPETAIFYSSTNKVYGDLEQFEYEETATRYQCVDLPAGFDEKVGLDFHSPYGCSKGSA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEG------SHVFLYG 215 D +L + +G+ + S+ YG F + + + ++ + + G Sbjct: 172 DQYMLDYARLFGLNTTVFRHSSMYGGRQFATYDQGWVGWFCQKALDAKANPDVAPFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 G+ VRD L+ ED + Y L K+ G+ +N+GG + + Sbjct: 232 TGKQVRDVLHAEDMISLYYSSLDNKEKVSGKAFNVGGGIDNSLSLLELFSLLESITGCKL 291 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 SY + R R + DS+K++S GW P+ + E G+ + + W Sbjct: 292 SYEKLPV------RSSDQRVFVADSTKLESLTGWKPKVSKEDGVGRMIEW 335 >gi|254486076|ref|ZP_05099281.1| udp-glucuronic acid epimerase protein [Roseobacter sp. GAI101] gi|214042945|gb|EEB83583.1| udp-glucuronic acid epimerase protein [Roseobacter sp. GAI101] Length = 333 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 53/350 (15%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 +VTG +GFIG L+ D +V+ +D L+ ++ +LKE Q+ L FS ++ Sbjct: 6 LVTGSSGFIGYFTSIALL-DAGWKVIGLDCLSDYYDV-ALKERRQAMLNQHAGFSVIKDR 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + ++ +PDA+V+ AA++ V SI +++ N+IGTF LLE R + Sbjct: 64 LETPGTLMEIFEKHRPDAVVHLAAQAGVRHSIEAPRDYVEANLIGTFELLEAARAYPPA- 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST VYGS + DMPY + S Y+ATK +++ + ++ Sbjct: 123 --------HMLLASTSSVYGS------NTDMPYAETHKVDTQMSFYAATKKATENMSHSY 168 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y +P+ + YGP+ P+ ++ G + +Y G RD+ Y++D + Sbjct: 169 AHLYHLPITMFRFFTVYGPWGRPDMAHFKFTKAILNGDPIDIYNHGDMKRDFTYIDD-LT 227 Query: 232 ALYLVLKKGRIGER---------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 A L L G+ NIG ++ +D + A I K+ Sbjct: 228 ASILALIDTVPGDTPVENDSLSNVAPFRVVNIGNDSPVPLMDFI--------AAIEKACG 279 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + +PG D+S +++ G P +E+GL V WY D Sbjct: 280 RAAIKTYHDMQPGDVPATWADASLLQNLTGQRPVTPIETGLQNFVDWYRD 329 >gi|134291129|ref|YP_001114898.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4] gi|134134318|gb|ABO58643.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4] Length = 348 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 45/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAINL----------L 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAW 171 K+ + R LQ ST EVYG D + +D Y NP + Y K ++ L + + Sbjct: 106 GLAKRVKARILQASTSEVYG--DPDVHPQDERYCGRVNPIGVRACYDEGKRCAETLFMDY 163 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG+ V ++ N YGP P +++ IT+ + G + +YGDG R + YV+D Sbjct: 164 HRQYGVDVRIARIFNTYGPRMHPADGRVVSNFITQALAGKPLTVYGDGTQTRSFCYVDDL 223 Query: 230 VRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + AL L+ + G E N+G ++E +DI E+ ++ + E D P Sbjct: 224 IDALVRLMDEPGDACEPVNLGSDDEIAMLDIAREVVRVVGTDV-----DIEFCPLPSDDP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ D + +GW + +GL T +++ Sbjct: 279 ---RQRRPDLEAARRRLGWRATTPLATGLAHTARYFI 312 >gi|258543467|ref|YP_003188900.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-01] gi|256634545|dbj|BAI00521.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-01] gi|256637603|dbj|BAI03572.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-03] gi|256640655|dbj|BAI06617.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-07] gi|256643712|dbj|BAI09667.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-22] gi|256646767|dbj|BAI12715.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-26] gi|256649820|dbj|BAI15761.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-32] gi|256652808|dbj|BAI18742.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655864|dbj|BAI21791.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus IFO 3283-12] Length = 324 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 26/333 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M L+VTG AGF+G + + L+ + QV+ ID L Y L L + FSF + Sbjct: 1 MTLLVTGAAGFVGFHVTQALLARGE-QVIGIDNLNGYYNPQLKQARLALLEAQPQFSFYR 59 Query: 57 VDICDRECIRSALKE-FQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ E ++ K+ + I +FAA++ V S+ F +N+ G +LE Sbjct: 60 CDLGQPENLQELQKKALNIEGIFHFAAQAGVRYSLKDPYIFADSNVRGHVAMLE------ 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 +++ + F+ S+ VYG K FSE P + P S Y+ TK +++ A+ H Sbjct: 114 --FARELPNLKHFVYASSSSVYGRNRKLPFSETDPVDHPGSFYAVTKRAAELASSAYSHL 171 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YGP+ P+ + EG V LY RD+ Y++D V A+ Sbjct: 172 YNIPQTGLRFFTVYGPWGRPDMAYYSFARAITEGRDVTLYEGASLARDFTYIDDVVAAVL 231 Query: 235 LVLKKGRIGERYNIG--GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 V ++ + GN+ + + + E L+ ++ IR++ RP D Sbjct: 232 AVYEQVPPATEPRVLNIGNHRPEPVKYLVE-------LLEQALGRKAAIRYL-PRPESDV 283 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + I+ GW PQ +E G+ + + W+ Sbjct: 284 EKTWADITSIQQLTGWAPQTTLEEGIPEFIRWF 316 >gi|222081304|ref|YP_002540667.1| dTDP-glucose 4 [Agrobacterium radiobacter K84] gi|221725983|gb|ACM29072.1| dTDP-glucose 4 [Agrobacterium radiobacter K84] Length = 337 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 146/331 (44%), Gaps = 37/331 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ + +V+ +D + G + +++ + + + FSF++ DI Sbjct: 20 ILVAGGAGFLGSHLCERLLLEGH-EVICVDDFS-TGRMENMRHLLRFDTFSFIRHDII-- 75 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + D I N A + + T + G+ LLE Sbjct: 76 -----GSIDLPVDEIYNLACPASPQHYQADPIHTLKTCVFGSLNLLELA----------A 120 Query: 123 KDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q R Q ST E+YG +G + + P S Y K S++ L + YG+ Sbjct: 121 HHQARIFQASTSEIYGDPQVHPQPEGYWGHVNSFGPRSCYDEGKRSAETLFYDFHKKYGV 180 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + ++ N YGP P+ +++ I + ++G + +YGDG R + YV+D + Sbjct: 181 DIRIARIFNTYGPRMRPDDGRVVSNFIVQALKGQDITIYGDGSQTRSFCYVDDLIEGFTR 240 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 +++ + I N+G E F I L + ++ + S ++++ + P D R+ Sbjct: 241 LMRSQPAIHTPVNLGNPTE-------FSIRNLAEQVVAMTGSPSKIV--YQPLPVDDPRQ 291 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K E+ W P + GL TV ++ Sbjct: 292 RRPDITVAKRELKWEPSVALADGLKSTVSYF 322 >gi|294676635|ref|YP_003577250.1| UDP-glucuronate 5'-epimerase [Rhodobacter capsulatus SB 1003] gi|294475455|gb|ADE84843.1| UDP-glucuronate 5'-epimerase-1 [Rhodobacter capsulatus SB 1003] Length = 354 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 160/348 (45%), Gaps = 45/348 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 R+++TG AGFIG L R L+ + +V D +T ++ +LK + L F+ + Sbjct: 21 RILLTGTAGFIGFHLARQLLAE-GWRVQGYDGMTDYYDV-ALKHDRHAILRAHPNFTATE 78 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D+ + F+P+ IV+ AA++ V S+ ++ +N+IGTF ++E R Sbjct: 79 AMLEDQPRFDAVADAFRPEVIVHLAAQAGVRYSLENPRAYLDSNVIGTFSVIEAAR---- 134 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + Q + L I ST VYG+ K F+E D + Y+ATK +++ + A+ H Sbjct: 135 ------RLQVKHLLIASTSSVYGANPKMPFAETDKADTQLTIYAATKKANESMAHAYAHL 188 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +PV + YGP+ P+ + + +++ + +Y G+ RD+ Y++D VR + Sbjct: 189 WNLPVTMFRFFTVYGPWGRPDLALYKFVDAILDDRPIDIYNHGEMYRDFTYIDDLVRGIR 248 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L++ + NIG +++ + +D V I L Sbjct: 249 LLIDAVPVRPEDGIVPAGDSLSPVAPFRIVNIGNSDKVRLLDFVEAIEACL--------G 300 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T L ++ + G D++ + S G+ PQ + G+ + V WY Sbjct: 301 KTALRNYLPMQKGDVPATFADATLLHSLTGYRPQTDFREGIARFVDWY 348 >gi|118587698|ref|ZP_01545108.1| NAD-dependent epimerase/dehydratase [Stappia aggregata IAM 12614] gi|118439320|gb|EAV45951.1| NAD-dependent epimerase/dehydratase [Stappia aggregata IAM 12614] Length = 337 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 27/246 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVD 58 ++VTG AGFIG LC L+ D +V+ +D +T Y L ++ + Q+ F + Sbjct: 4 VLVTGSAGFIGYFLCTRLLKD-GFRVIGLDAMTDYYDVRLKERRQQMLMQNEHFKPINDR 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + S + +PD +++ AA++ V SI ++ +NI GTF LLE R + Sbjct: 63 VEAPDLLMSLFRTERPDFVIHLAAQAGVRYSIEAPRSYLESNICGTFELLEAARAF---- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST YG+ + +MPY + S Y+ATK +++ + ++ Sbjct: 119 -----PPEHMLLASTSSAYGA------NTEMPYTETDKADHQMSFYAATKKATESMAHSY 167 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H Y +PV + YGP+ P+ + ++EG + +Y G RD+ YVED V Sbjct: 168 AHLYDLPVTMFRFFTVYGPWGRPDMALFKFTKAILEGKPIDVYNYGDMRRDFTYVEDLVE 227 Query: 232 ALYLVL 237 + L++ Sbjct: 228 GIRLLM 233 >gi|220903311|ref|YP_002478623.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867610|gb|ACL47945.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/358 (25%), Positives = 151/358 (42%), Gaps = 60/358 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV------IDKLTYAGNLNSLKEISQSNLFSF 54 M ++VTG AGFIG L L+ D V + D L L + Q++ F F Sbjct: 1 MHVLVTGAAGFIGYHLAARLLADGHSVVGIDNCNDYYDVQLKKDRLAQLAALPQASCFRF 60 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+ D + + +VN AA++ V S++ + ++++N+ G +LE R Sbjct: 61 EPLDLADGPGMSALFAREGFSHVVNLAAQAGVRYSLVNPESYLSSNLTGFGHVLEGCR-- 118 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYL 167 +K F S+ VYG + PY +P S Y+ATK S++ + Sbjct: 119 -----HNKVGHLLF--ASSSSVYG------LNAAQPYSVRHNVDHPVSLYAATKKSNELM 165 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 ++ H YGIP YGP+ P+ + L T ++ G + ++ +G+ RD+ Y++ Sbjct: 166 AHSYSHLYGIPCTGLRFFTVYGPWGRPDMALHLFTTAIVRGEPIKVFNEGRMRRDFTYID 225 Query: 228 DHVRALY--LVLKKG-------------------RIGERYNIGGNNERKNIDIVFEIGFL 266 D V + L L G RI YNIG NN + D I L Sbjct: 226 DIVEGIVRLLPLAPGPDPAFDPAAPDPASSSAPWRI---YNIGNNNTVELNDF---IATL 279 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 DAL K+ + +PG + D + + + G+ P + G+ + V WY Sbjct: 280 EDALGMKARK-----DMLPMQPGDVKATWADINDLTALTGFAPSTPLREGIARFVEWY 332 >gi|172038146|ref|YP_001804647.1| GDP-D-mannose 4,6-dehydratase [Cyanothece sp. ATCC 51142] gi|171699600|gb|ACB52581.1| GDP-D-mannose 4,6-dehydratase [Cyanothece sp. ATCC 51142] Length = 362 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/323 (26%), Positives = 145/323 (44%), Gaps = 19/323 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ +V I + T N + + + Q++ FL Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHMYVDPHQTDAKLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E QP I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVQPFEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + RF Q + E++G + E P+ P SPY+ K + + L + +Y Sbjct: 123 --QQRTGIEVRFYQAGSSEMFGKVQDIPQKETTPFYPRSPYACAKVYAHWQTLNYRESYN 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R++ G+ LY G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + + E ++ +I F L + Y + R++ RP Sbjct: 241 MWLMLQQEQADD--YVVATGETHSVKEFLKIAFKYVNLNWEDYVDFDK-RYL--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFPQENMES 315 D SK K+++GW P E Sbjct: 296 LLIGDPSKAKTKLGWEPSVTFEQ 318 >gi|145295826|ref|YP_001138647.1| hypothetical protein cgR_1751 [Corynebacterium glutamicum R] gi|140845746|dbj|BAF54745.1| hypothetical protein [Corynebacterium glutamicum R] Length = 329 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS L+ V +ID + GN ++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGH-DVTIIDNFS-TGNREAVPADAR-----LIEGDVS 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E + +V+FAA S V S+ +E+ N++ LL+ R Sbjct: 54 D--IVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG D +EDMP P++ Y ATK S DY + ++ +G+ Sbjct: 104 -AHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMIEGSH---VFLYG------DGQNVRDWL 224 N G Y LIPL + + H +F++G DG VRD++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVL--QVATGHREKIFMFGDDWPTPDGTAVRDYI 220 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ D +A L L+ G+ +N+G G + ++ +++ E+ H Sbjct: 221 HILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREV-----------TGHPI 269 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S K K E+GW P+ Sbjct: 270 PAEVAPRRAGDPATLIASSEKAKQELGWTPEHT 302 >gi|83815883|ref|YP_446800.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855] gi|294508730|ref|YP_003572789.1| dTDP-glucose 4-6-dehydratase [Salinibacter ruber M8] gi|83757277|gb|ABC45390.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855] gi|294345059|emb|CBH25837.1| dTDP-glucose 4-6-dehydratase [Salinibacter ruber M8] Length = 321 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 R ++TGGAGF+GS LC + + V+ +D L N+ L E+ Q + F F++ D+ Sbjct: 3 RTLITGGAGFLGSHLCDRFIEEGH-SVICMDNLITGDTENIEHLFELGQ-DRFRFVEYDV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L D +++FA+ + D + + + +GT L Sbjct: 61 TDYLHVNGEL-----DYVLHFASPAAPDDYLQYPIQTLKVGALGTH----------KALG 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 K R L ST EVYG SED P Y K + L +A+ Sbjct: 106 LAKAKDARLLIASTSEVYGDPQVHPQSEDYWGNVNPVGKRGVYDEAKRFGEALTMAYHRY 165 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ ++ N YGP + + +P +++ + G + +YGDG R + YV+D V Sbjct: 166 HGVETRIARIFNTYGPRMRIDDGRALPNFMSQALRGDPLTVYGDGSQTRAFCYVDDLVEG 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY +L + NIG +E + EI + D+ +Y E P D Sbjct: 226 LYRLLMSDAT-DPVNIGNPDEITIKEFAEEIIEVTDSDSDITY---------EPLPSDDP 275 Query: 293 RY-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S+ + E+GW P+ + GL +T+ ++ Sbjct: 276 QVRQPDISRAREELGWTPEVDRREGLRRTLEYF 308 >gi|256420126|ref|YP_003120779.1| NAD-dependent epimerase/dehydratase [Chitinophaga pinensis DSM 2588] gi|256035034|gb|ACU58578.1| NAD-dependent epimerase/dehydratase [Chitinophaga pinensis DSM 2588] Length = 353 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 163/353 (46%), Gaps = 39/353 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK---------EISQS 49 M+++VTG AGFIG + L +L +V+ +D + Y NL + +I+ + Sbjct: 1 MKILVTGAAGFIGYYATKRLA-ELNFEVVGLDNINEYYDINLKHARLAEAGIDKNKIAYN 59 Query: 50 NL--------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L + F+++++ D+E + + + Q D + N AA+ V S+ ++ +N+ Sbjct: 60 ELILSDKYKNYRFVKLNLDDQENLAALFRNEQFDVVCNLAAQPGVRYSLENPFVYVNSNV 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 +G +LE C +K + S+ VYG K F E D NP S Y+AT Sbjct: 120 VGFMNILE-------CCRYNKVKHLVY--ASSSSVYGMSKKVPFEETDNVDNPVSLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K +++ + H YG+ YGP+ P+ L +++G + ++ +G+ Sbjct: 171 KKANELFAHTYSHLYGLKTTGLRFFTVYGPWGRPDMAPFLFTNAILKGEAIKVFNNGELS 230 Query: 221 RDWLYVEDHVRAL--YLVLKKGRIGERYNIGGNNERKNIDIVFEIG-----FLLDAL--I 271 RD+ YV+D V + ++L ++ + E + +F IG L+D + I Sbjct: 231 RDFTYVDDVVEGVIRVIMLPDNEKEQKDSGEAQGEFSGLYKIFNIGNSSPVQLMDFIRCI 290 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ +++ + +PG D+S++ + + + P ++ G+++ V W+ Sbjct: 291 EKATGKEAILKMLPMQPGDVVSTYADTSELAAYVNYRPSTPLQDGIDRFVSWF 343 >gi|226311341|ref|YP_002771235.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Brevibacillus brevis NBRC 100599] gi|226094289|dbj|BAH42731.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Brevibacillus brevis NBRC 100599] Length = 323 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 47/355 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-SNLFSFLQVDI 59 M+ ++TG GF GS L YL++ + V G SL + Q NL + ++ Sbjct: 1 MKALITGVTGFAGSHLAEYLLSRGDVDVY--------GTFRSLTKKEQLGNLIDRVHMEN 52 Query: 60 C---DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 C D + + ++ +PD I + AA+S V S+ + + NI+ L E R Sbjct: 53 CELKDPQSVNELIQRIKPDLIFHLAAQSFVPTSLSSPADTMVNNIVPQLHLFEAVRNHAV 112 Query: 117 CLSQDKKDQFRFLQIS-TDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +QI+ + E YG + ++ E P P +PY+ +K + DYL + H Sbjct: 113 ACK---------IQIACSSEEYGLVYPEEIPIKETNPLRPLNPYAVSKIAQDYLGYQYHH 163 Query: 174 TYGIPVLLSNCSNNYGPY--------HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 +YG+ ++ + ++ GP +F +++ + + HV G+ + +RD+ Sbjct: 164 SYGLAIIRTRTFHHTGPRRGESYVTSNFAKQIAQIELGLQEPKVHV---GNLEAIRDFTD 220 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V D V+A +L + +G G+ YNI D++ + L D + H + R Sbjct: 221 VRDIVKAYWLAITRGEPGDVYNISAGTRYTIEDMLKTLLALTDVQVE---IHVDTNRL-- 275 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 RP DSS + + GW P+ + + + + N+W L +++ P Sbjct: 276 -RPSDVDIVLGDSSLFREKTGWEPEISFQQTMEDLL------NYWRSVLRQQISP 323 >gi|42779641|ref|NP_976888.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] gi|42735557|gb|AAS39496.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] Length = 321 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVKR-GYDVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 RNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L +G Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEVGDRLYGATSKIRWSYAVCKTLEETLCLGYG-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L KS S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKS----IKEVAEVIKKLT-KSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLRELVQFQAKVTWEQGLKETIKWFREEN 319 >gi|149916004|ref|ZP_01904527.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] gi|149810078|gb|EDM69926.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] Length = 335 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 49/351 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR+++TG AGFIG L + L+ + V D +T +++ LK+ L F+ Sbjct: 1 MRVLITGTAGFIGFHLAKLLLAE-GFVVHGYDGMTDYYDVD-LKQQRHRILLPNPNFAAT 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + D+E + EF+PD IV+ AA++ V S+ ++ N+IGTF ++E R Sbjct: 59 EGMLEDQELFDRVVDEFEPDVIVHLAAQAGVRYSLENPRAYLDANVIGTFNVMEAAR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHT 174 + L ST VYG+ + F E + + Y+ATK +++ + A+ H Sbjct: 116 ------RLGVQHLLMASTSSVYGANTEMPFFETQKADTQLTIYAATKKANESMGHAYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P + YGP+ P+ + +++G + +Y +G RD+ YV+D VRA+ Sbjct: 170 YDLPTTMFRFFTVYGPWGRPDLAFYKFVDAILDGRPIDIYNNGNMYRDFTYVDDLVRAIR 229 Query: 235 L------------VLKKG---------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 L V+ +G R+ NIG + + + +D V I + + Sbjct: 230 LLIDVAPSRPENCVVPEGDSLSPVAPYRV---VNIGNSEKVRLLDFVDAIEDCIGQKAER 286 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +Y + D P ++ +K+ G+ PQ + + G+ + V WY Sbjct: 287 NYMGMQ----TGDVPAT----WANADLLKTLTGYRPQTDFKDGIARFVEWY 329 >gi|302344192|ref|YP_003808721.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301640805|gb|ADK86127.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 330 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 146/335 (43%), Gaps = 29/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFS----F 54 ++VTG AGFIGS R L+ +V+ ID L Y L N+L I +++ S F Sbjct: 5 ILVTGAAGFIGSHCVRALLARGD-RVVGIDNLNDYYDPRLKKNNLALIERAHADSGRWRF 63 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DI DRE + + DA ++ AA + V SI + N+ GT LLEE R Sbjct: 64 VHGDIRDRELLAKLFDQNGFDAAIHLAAMAGVRASIDQPHLYWDVNLTGTLNLLEEAR-- 121 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + F+ ST VYG F E D P +PY+A+K +++ L ++ H Sbjct: 122 -------RARLGNFVFASTSSVYGDTKIMPFVETDTCDRPLAPYAASKRATELLAYSYRH 174 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +G+ YGP+ P+ + + + G V L+ GQ RDW ++ D Sbjct: 175 LHGLNCTALRYFTVYGPWGRPDMMALKVLDNIHFGRQVVLFNKGQMHRDWTFIGDITAGT 234 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L E NIG R ++ E L+AL K + + D P Sbjct: 235 ILAADTPLGFEALNIG----RGEPILLAEFIAKLEALSGKKANLQDAPMMKADVP----- 285 Query: 294 YAI-DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 Y D +K + IG+ P +++ GL+ WY ++ Sbjct: 286 YTFADITKARKLIGYDPVTSLDEGLHGLYQWYAEH 320 >gi|62259594|gb|AAX77862.1| unknown protein [synthetic construct] Length = 362 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/339 (28%), Positives = 150/339 (44%), Gaps = 27/339 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ N ++ SN + F++ DI D Sbjct: 44 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLSNGHYHNVEPFLTNSN-YEFIKGDIRDL 101 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ G +LE R + Sbjct: 102 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAAR---------Q 150 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 151 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 210 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 211 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 270 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 271 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 322 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 D SK ++ +G+ P+ + E G+ V WYL N + P Y Sbjct: 323 DISKARNMLGYNPEYDFELGIKHAVEWYLINYPYDVPDY 361 >gi|237752233|ref|ZP_04582713.1| GDP-mannose 4,6-dehydratase [Helicobacter winghamensis ATCC BAA-430] gi|229376475|gb|EEO26566.1| GDP-mannose 4,6-dehydratase [Helicobacter winghamensis ATCC BAA-430] Length = 342 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 30/324 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + YL+ +V+ + + N+ L + I++ + S D+ D Sbjct: 5 LITGFTGQVGSQMADYLLEHTNYEVIGMMRWQEPMDNIYHLSDRINKKDRISVFYADLND 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ + +PD + + AA+S+ S E + TNIIGT +LE R + +D Sbjct: 65 YSSIQKLFESKKPDVVFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIR---NLRDKD 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G YGI Sbjct: 122 SYDPVVHI-CSSSEVYGRAKVGVKLNEETTFHGASPYSISKIGTDYLGRFYGEAYGIRTF 180 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDHVRALYL 235 ++ + GP F E + I + G V G+ +VR + D +RA YL Sbjct: 181 VTRMGTHSGPRRSDVFFESTVAKQIALIEAGFQEPVIKVGNLSSVRTFQDCRDAIRAYYL 240 Query: 236 V---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---- 286 + +KG + GE +NI G F++ +++ L+ +S + I +D Sbjct: 241 LSLESEKGNVPCGEAFNIAGEE-------AFKLPEVIEILL--GFSTRKDIEIKQDEERM 291 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 292 RPIDADYQMFDNTKIKSFINWKPE 315 >gi|221209613|ref|ZP_03582594.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD1] gi|221170301|gb|EEE02767.1| UDP-glucose 4-epimerase [Burkholderia multivorans CGD1] Length = 329 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 143/345 (41%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAG+IGS C+ L V D T G+ ++++ + I Sbjct: 1 MKVFVTGGAGYIGSHTCKALAEAGHTPVAYDDLST--GHRDAVR------WGPLVVGSIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + AL +PD +++FAA ++V S+L D + TN+ GT LL R Sbjct: 53 DRDALGRALAAHRPDIVIHFAALAYVGESVLAPDRYYATNVTGTCTLLNAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-V 179 R + S+ YG D E P +P +PY TK + + + + YG+ V Sbjct: 105 -AAGVGRIVLSSSCATYGIPDALPICEHTPQHPINPYGFTKYAMERMAADFERAYGMKWV 163 Query: 180 LL-------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFLY-------GDGQNVRDWL 224 L ++ G H PE +PLAI + F DG VRD++ Sbjct: 164 ALRYFNAAGADPDGLLGENHEPETHALPLAIRAALGTGRPFTVMGTDYPTPDGSAVRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV+A + + G N+G +++V + + + +P + Sbjct: 224 HVSDLADAHVKATAYLCRGGN-SVALNLGTGTGTSVLELVRAVETVTGSGVPTVMA---- 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++K +GW P+ +E + W+ Sbjct: 279 ----ARRPGDPPALYADATKAALVLGWRPRFAGIEPMVEHAARWF 319 >gi|209550573|ref|YP_002282490.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536329|gb|ACI56264.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV- 57 MR +TG AGFIG L R L+ + +V D LT Y L ++ + S +F V Sbjct: 1 MRYFITGTAGFIGFHLARRLLQEGH-EVTGFDGLTPYYNVKLKEMRHAALSQFPAFKPVI 59 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DRE + +A+ +PD +++ AA++ V S+ + ++ +N+ G+ W+ Sbjct: 60 AMLEDREALEAAVVAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGS----------WN 109 Query: 117 CLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + ++ + R L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 110 IMEIARRVEIRHLMLASTSSIYGANATVPFHETDRADEPLTIYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + IP YGP+ P+ + M+EG + +YG+G RD+ Y++D V + Sbjct: 170 HKIPTTAFRFFTVYGPWGRPDMALFKFTKNMLEGQPIEIYGEGNMSRDFTYIDDLVEGIV 229 Query: 235 LV------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + L + NIGG +D V + K+ Sbjct: 230 RLSAIAPGEDNRLDNVAVETLSRQAPFRVVNIGGGQPVSLMDFV--------ETVEKALG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + + G R + + G+ P ++ G+ V WYLD Sbjct: 282 RPAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDVGVKAFVDWYLD 331 >gi|294506605|ref|YP_003570663.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] gi|294342933|emb|CBH23711.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] Length = 311 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 30/328 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + L+ + +V ++D NL++ + + DI Sbjct: 1 MTILVTGGAGFIGSHVADALLAEGH-EVHILD------NLSTGRRWKAPEGAPLFEHDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E S E Q D +V+ AA+ V +S+ N+ G L+E + + Q Sbjct: 54 S-EAAASLFTEHQYDCLVHHAAQMDVRKSVEDPSFDADVNVRGLLNLME------AGIGQ 106 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R L ST +YG + E P P SPY K +++ + + Y + Sbjct: 107 GLR---RVLFASTGGAIYGEPEYTPQDEKHPLRPVSPYGVAKLAAEKYLHYYQDQYEVET 163 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +N YGP P ++ + M+ G + G G+ RD++YV D V A Sbjct: 164 VSLRYANVYGPRQNPGGEAGVVAIFTNEMLRGGQPVINGSGEQTRDYVYVGDVVEANLAA 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 LK G +N+G E ++ + A + +++ +PG +R + Sbjct: 224 LKCEGSG-TFNVGTGRETSVTELFRALRAETGADLDETHGPA--------KPGEQQRSVL 274 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + ++GW P+ ++E GL +TV W+ Sbjct: 275 GYERAEEKLGWVPRVSVEEGLARTVDWF 302 >gi|18977729|ref|NP_579086.1| UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase [Pyrococcus furiosus DSM 3638] gi|18893466|gb|AAL81481.1| UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase [Pyrococcus furiosus DSM 3638] Length = 336 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 37/332 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ +L +V +D +G ++ ++ F F++ D+ Sbjct: 27 LVTGGAGFLGSWLCDVLI-ELGAKVYCVDNFA-SGRWENISHLTSEENFVFIEHDVSKPL 84 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 IR L D I +FA+ + E I N +GT +LE KK Sbjct: 85 EIREKL-----DFIFHFASRASPFEFEHYPLEIIDANTLGTRNMLELA----------KK 129 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ ST E+YG + E P S Y +K + L +A+ + + Sbjct: 130 NNARFIFASTSEIYGHPEVVPTPETYWGYVNPIGIRSCYDESKRLGEALTMAYYRQFNVD 189 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 V + N YGP + +++P I++ + + ++GDG R + YV D + + Sbjct: 190 VRIVRIFNTYGPRMRADGVYGRVVPRFISQALNEEPITVFGDGSQTRSFCYVTDLITGVL 249 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + ++ GR GE N+G E +++ + LI K + I F P Sbjct: 250 KFAAVENGR-GEVVNLGNPREISILELAY--------LIKKLTNSDSPIEFHPLPPDDPP 300 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK + + W P+ +E GL KT+ W+ Sbjct: 301 RRCPDISKAQKLLNWKPKVELEEGLKKTIKWF 332 >gi|163943132|ref|YP_001648016.1| UDP-glucose 4-epimerase [Bacillus weihenstephanensis KBAB4] gi|163865329|gb|ABY46388.1| UDP-glucose 4-epimerase [Bacillus weihenstephanensis KBAB4] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ + +++V+D L+ + ++N + EI+ F F + D Sbjct: 1 MAILVTGGAGYIGSHTCVELLKN-GYEIIVVDNLSNSSVESINRVTEITGKQ-FKFYKED 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +RE + + +E +A+++FA V S+ + NI T +L C Sbjct: 59 ILNREALDTIFEENTIEAVIHFAGFKAVGESVEIPLTYYHNNITSTLVL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHTYG 176 K + + + S+ VYG + +E+ P + ++PY TK + ++ +A+ Sbjct: 110 VMQKHNVKKMIFSSSATVYGIPETSPITEEFPLSATNPYGQTKLMIEQIMRDVAFADAEW 169 Query: 177 IPVLL-------SNCSNNYG--PYHFPEKLIP----LAITRMIEGS---HVFLYGDGQNV 220 LL ++ S G P P L+P +A+ ++ E S + + DG V Sbjct: 170 SIALLRYFNPFGAHESGRIGEDPNGIPNNLMPYVTQVAVGKLKELSVFGNDYPTKDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV+AL VL I + YN+G +++V + +P Sbjct: 230 RDYIHVVDLANGHVKALEKVLGTTGI-DAYNLGTGTGYSVLEMVEAFEKVSGKEVP---- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + E RPG D+SK K E+GW + +E +C ++W W+ Sbjct: 285 ----YKITERRPGDVAVCFADASKAKRELGWEAKRGLEE-----MC---ADSWRWQ 328 >gi|186682745|ref|YP_001865941.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] gi|186465197|gb|ACC80998.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] Length = 315 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQ---SNLFSFLQV 57 ++IVTG AGFIGS L L+ + +V+ ID+ Y + K ++ S F+ ++ Sbjct: 3 KIIVTGAAGFIGSHLVYILLQQGE-EVIGIDEFNDYCDPMLKRKNVAHLHSSPGFTLIEA 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGA-DEFITTNIIGTFILLEETRLWWS 116 DI + + LK+ D + + AA++ V S A + NI T +LLE + Sbjct: 62 DIQFLDW-QELLKDV--DVVYHQAAQAGVRASWGKAFRGYTERNINATQVLLEAAK---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D K R + S+ VYG + E + P SPY TK +++ L + +G Sbjct: 115 ----DAKHLKRLVFASSSSVYGDAETLPTHEGICPEPVSPYGITKLAAETLCRLYHKNFG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 +P + YGP P+ +++ + +YGDGQ R++ +V D V A L Sbjct: 171 VPYVSLRYFTVYGPKQRPDMAFHKFFKSILQDEAIPIYGDGQQTREFTFVGDIVAANLAA 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +GE +NIGG + +++ I ++ I +++ IE G R A Sbjct: 231 ASTPQAVGEIFNIGGGSRVVLAEVLDTIEEIVGKPIKRNH--------IEKAMGDARHTA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK + +G+ PQ ++ GL + W Sbjct: 283 ADVSKAQKILGYQPQVSLRDGLTQEWRW 310 >gi|198243307|ref|YP_002216176.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929138|ref|ZP_03220281.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353231|ref|YP_002227032.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857524|ref|YP_002244175.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197937823|gb|ACH75156.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321682|gb|EDZ06881.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273012|emb|CAR37960.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709327|emb|CAR33667.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326623922|gb|EGE30267.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628318|gb|EGE34661.1| CDP-paratose 2-epimerase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + ++ I ++V D L+ G ++L +S F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + + ++ PD+ + A + + SI N+ GT LLE R + S Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS---- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASS 164 + ST++VYG L++ ++E D P Y+ S SPY +K ++ Sbjct: 116 ----NCNIIYSSTNKVYGDLEQYKYNETETRYTCIDKPNGYDESTQLDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIE-----GSHVFLYGD 216 D +L + +G+ ++ S+ YG F + + + +E + G+ Sbjct: 172 DQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+ ED + + L +I G +NIGG IV + L + + Sbjct: 232 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-------IVNSLSLLELFKLLED 284 Query: 275 YSHTELIRF--IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y + ++ RF + R R + D KI + I W P+ + + G+ K W Sbjct: 285 YCNIDM-RFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW 334 >gi|16761020|ref|NP_456637.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141284|ref|NP_804626.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052834|ref|ZP_03345712.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425554|ref|ZP_03358304.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213585969|ref|ZP_03367795.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615670|ref|ZP_03371496.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646917|ref|ZP_03376970.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289803307|ref|ZP_06533936.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|1350580|sp|P14169|RFBE_SALTI RecName: Full=CDP-paratose 2-epimerase; AltName: Full=CDP-tyvelose 2-epimerase gi|25292382|pir||AE0766 CDP-tyvelose-2-epimerase (EC 5.1.3.-) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|861175|gb|AAB49384.1| CDP-tyvelose epimerase [Salmonella enterica] gi|16503318|emb|CAD02451.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136910|gb|AAO68475.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + ++ I ++V D L+ G ++L +S F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + + ++ PD+ + A + + SI N+ GT LLE R + S Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS---- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASS 164 + ST++VYG L++ ++E D P Y+ S SPY +K ++ Sbjct: 116 ----NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIE-----GSHVFLYGD 216 D +L + +G+ ++ S+ YG F + + + +E + G+ Sbjct: 172 DQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L+ ED + + L +I G +NIGG IV + L + + Sbjct: 232 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-------IVNSLSLLELFKLLED 284 Query: 275 YSHTELIRF--IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y + ++ RF + R R + D KI + I W P+ + + G+ K W Sbjct: 285 YCNIDM-RFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW 334 >gi|198284959|ref|YP_002221280.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665254|ref|YP_002427644.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249480|gb|ACH85073.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517467|gb|ACK78053.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 294 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/286 (26%), Positives = 122/286 (42%), Gaps = 30/286 (10%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + +A+ QP+A+++ AA+S V + E N GT LLE Sbjct: 29 LDLRDRAALTAAVAAIQPEAVLHLAAQSFVPAAFENPHETFDINFTGTLNLLEAL----- 83 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 Q R L + + + YG + + ED P P +PY+ +K +++ L W T Sbjct: 84 ---QSSGFMGRMLFVGSGDTYGQVSEADLPVREDHPLRPRNPYAVSKVAAEALCYQWSQT 140 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIP-----LAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G +++ N+ GP P I + RM + V GD RD+ V D Sbjct: 141 SGFEIVMVRPFNHIGPGQSPRFAIADFARQVMEIRMGRRAPVLQVGDIDVTRDFTDVRDV 200 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL--LDALIPKSYSHTELIRFIEDR 287 VRA L+L+KG+ G YN+ E + D++ ++ L ++A I + + R Sbjct: 201 VRAYTLLLEKGQNGGIYNVCSGREYRIRDLLRQLLTLAGVEATIERDPARL--------R 252 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 P RR + + GW P ME L L N+W P Sbjct: 253 PAEQRRMVASFDALHRDTGWQPAIPMEESLQD-----LLNDWEKSP 293 >gi|189347083|ref|YP_001943612.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] gi|189341230|gb|ACD90633.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] Length = 336 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/355 (23%), Positives = 151/355 (42%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M ++VTG AGFIGS +C+ L+ +++T NLN SLKE L Sbjct: 1 MNVLVTGAAGFIGSHVCQRLLERG-------ERVTGLDNLNDYYDVSLKEARLDWLRPYA 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F++ D+ DR+ + ++ + +VN AA++ V SI+ ++ +NI+G +LE Sbjct: 54 DFRFVKTDLADRQGMEELFRKGGFEKVVNLAAQAGVRYSIVNPHSYVESNILGFLNILEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG+ + FS D +P S Y+A+K +++ + Sbjct: 114 CR---------HNGVEHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y I YGP+ P+ + L ++ + ++ G++ RD+ Y++D Sbjct: 165 TYSHLYNISATGLRFFTVYGPWGRPDMALFLFTDAILNNRPIKVFNYGKHRRDFTYIDDI 224 Query: 230 VRALYLVLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALI 271 V + L + YNIG + +D + + Sbjct: 225 VEGVIRTLDHNAESNPEWSGLHPDPGSSRAPWKVYNIGNSQPVNLMDYI--------GAL 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + T F+ +PG D ++ ++ + P+ +E G+ + V WY D Sbjct: 277 ERQLGKTAEKEFLPMQPGDVPDTYADVEQLIQDVHYKPETTVEEGVRRFVAWYRD 331 >gi|159900259|ref|YP_001546506.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893298|gb|ABX06378.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 320 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 36/344 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVN--DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 MR+++TG G +GS L YL+ DL+I L + + ++ + +F + D Sbjct: 1 MRVLITGITGPVGSFLADYLLTLPDLEIHALK----RWRSDPRPIEHLQ--GKVTFHEGD 54 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + + L+ QP+ I + AA+S+ S + N GT +LE R+ Sbjct: 55 IEDAFAMATLLRRVQPERIFHLAAQSYPSASWDAPVTTLRANTEGTLNILEAVRV----- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q R T YG ++ E P P SPY +KA+++ L L + +YG Sbjct: 110 ---TVPQARLHIACTSAQYGIVNPADVPIKESHPLRPGSPYGVSKAAAEMLGLQYHQSYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRM--IEGSH---VFLYGDGQNVRDWLYVEDHVR 231 + V+++ N+ GP I +M IE V G+ + RD+ + D R Sbjct: 167 LHVVVTRSFNHVGPRQGDRCSIQTFCQQMAAIEAGQSEPVIHVGNLEPQRDFSHFSDVAR 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 AL+L+L+K GE YN+ + DIV + I + L RP + Sbjct: 227 ALWLLLEKAPPGEVYNLCSGVATRIGDIVELVRRFGRVPIEVRLDPSRL------RPVDE 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 D+SK++ GW PQ ME + V LD +WR Y Sbjct: 281 PILQGDNSKLRQATGWEPQIGME----QIVQEVLD---FWRERY 317 >gi|256810425|ref|YP_003127794.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] gi|256793625|gb|ACV24294.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] Length = 304 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 148/332 (44%), Gaps = 46/332 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIGS + L+ + V+++D LT N+N E F+ DI Sbjct: 2 MLVTGGAGFIGSHIVDKLIEN-NYDVIILDNLTTGNKANVNPKAE--------FVNADIR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + D + + AA+ +V S+ NI+GT +LE R + Sbjct: 53 DK-TLDEKINFKDVDVVFHQAAQINVRNSVENPMYDGDVNILGTINILEMMRKY------ 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F S VYG + E NP SPY +K + + + YG+ Sbjct: 106 -DIDKIIFAS-SGGAVYGEPNYLPVDESHTINPLSPYGLSKYVGEEYIKLYNRLYGLEYA 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + I RM++ ++GDG RD++YV D +A + L Sbjct: 164 ILRYANVYGERQDPKGEAGVISIFIDRMLKNESPVIFGDGNQTRDFVYVGDVAKANLMAL 223 Query: 238 K-KGRIGERYNIGGN-----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 K I NIG NE NI I EIGF +A+ ++ R G Sbjct: 224 NWKNEI---VNIGTEKETSVNELFNI-IKNEIGFKGNAIYGRA------------REGEV 267 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R +D K KS +GW P+ +++ G+ + V W Sbjct: 268 YRIYLDIKKAKS-LGWRPEVDLKEGIKRVVDW 298 >gi|192292869|ref|YP_001993474.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] gi|192286618|gb|ACF02999.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris TIE-1] Length = 330 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 33/339 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG + R L+ + V+ +D L Y L L ++ FSF++ D Sbjct: 6 VLVTGAAGFIGYHVARELLEAGNV-VVGLDSLNDYYDPALKQARLDLLTPYPGFSFVRAD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR I + + +++ AA++ V S+ ++ +N+ G +LE R Sbjct: 65 LSDRAAIADLFAKHRFPVVIHLAAQAGVRHSLSHPHDYADSNLEGFLNVLEGCR------ 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ K FS P + P S Y+ATK +++ + + H Y + Sbjct: 119 ---HNGCSHLIYASSSSVYGANTKLPFSVADPTDHPISLYAATKKANELMAHCYSHLYRL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP++ P+ + L + EG + L+ G+ RD+ +V+D R + ++ Sbjct: 176 PTTGLRFFTIYGPWYRPDMALYLFARAITEGRPIKLFNHGKMRRDFTFVDDVTRVVTKLM 235 Query: 238 K----------KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 G YN+G ++ + + +V AL+ ++ + + + Sbjct: 236 TLVPTAEPGQNGGAPARVYNVGNHSPEELMHVV--------ALLERALGRPAIKEMLPMQ 287 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG D + ++G+ P +E G+ V W+ D Sbjct: 288 PGDVPETFADVEALFRDVGFRPSTPIEDGVRAFVRWFRD 326 >gi|148238581|ref|YP_001223968.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803] gi|147847120|emb|CAK22671.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803] Length = 343 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 46/349 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSFL 55 +++TG AGFIG+AL + L+ +V+ ID L L ++ ++ +SF Sbjct: 8 ILITGAAGFIGAALAQRLLQRGD-RVVGIDSLNSYYDPSLKQARLQQIEAVAAPGAWSFC 66 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + ++ +P +VN AA++ V S+ +I +N++G +LE Sbjct: 67 HQALEAADALQELFAREKPRVVVNLAAQAGVRYSLENPAAYIQSNLVGFGNILE------ 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 C ++ + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 121 GCRHHGVEN---LVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTYSHL 177 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 YG+P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V L Sbjct: 178 YGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGEPIKVFNHGKMQRDFTYIDDIVEGVL 237 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIE------ 285 K ++ + VF IG + TEL+RFIE Sbjct: 238 RCCDKPATANPNFDALAPDPSTAAAPHRVFNIG---------NSQPTELLRFIEVMEQAL 288 Query: 286 ----------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A D+S ++S +G+ P +E G+ + WY Sbjct: 289 GRQAIKDFQPMQPGDVVATAADTSALESWVGFKPSTPIEEGIAQFAHWY 337 >gi|328474644|gb|EGF45449.1| nucleotide sugar epimerase [Vibrio parahaemolyticus 10329] Length = 334 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 155/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLF 52 M+ +VTG AGFIGSA R L N L +V+ ID +L YA LN +K S F Sbjct: 1 MKYLVTGAAGFIGSATIRKL-NSLGYEVIGIDNINDYYDVELKYA-RLNFIKNPS----F 54 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F +DI ++ I ++ + D +++ AA++ V S++ + +N+ G +LE R Sbjct: 55 RFFNIDISNKNEIERLFEKEKFDRVIHLAAQAGVRYSLVNPHCYAESNLSGFLNVLEACR 114 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 K F+ S+ VYG K FS D +P S Y+ATK S++ + ++ Sbjct: 115 ---------KSHIKHFIYASSSSVYGLNKKVPFSTSDNADHPVSLYAATKKSNELMAHSY 165 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT-RMIEGSHVFLYGDGQNVRDWLYVEDHV 230 H Y +P YG + P+ + P T ++I G + + +G RD+ ++ D V Sbjct: 166 SHLYQLPTTGLRFFTVYGSWGRPD-MAPFIFTEKIINGQSIDINNNGDMWRDFTHINDIV 224 Query: 231 RALYLVLKK-GRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + RI +R YNIG + +D + I L Sbjct: 225 EGIVRISDVIPRINQRWQFENSTPADSSAPYSIYNIGYGSPICLMDFIKAIENELGIEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+Y E +PG + D++ G+ P ++E G+ + V WY Sbjct: 285 KNYR--------EMQPGDVYQTYADTTAFYQATGYRPSVSVEEGIAEFVAWY 328 >gi|254368827|ref|ZP_04984840.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC022] gi|157121748|gb|EDO65918.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC022] Length = 327 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ N ++ SN + F++ DI D Sbjct: 18 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLSNGHYHNVEPFLTNSN-YEFIKGDIRDL 75 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 76 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 125 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 184 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 185 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 244 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + + +L I + F DR G + Sbjct: 245 ADSKYAGESFNIAYGGREYLIDLYYNLCDVLGKKIEPN--------FGPDRAGDIKHSNA 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 297 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 327 >gi|301056915|ref|YP_003795126.1| UDP-glucose 4-epimerase [Bacillus anthracis CI] gi|300379084|gb|ADK07988.1| UDP-glucose 4-epimerase [Bacillus cereus biovar anthracis str. CI] Length = 338 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE E +A+++FA V S + NII T +L C Sbjct: 59 VLNREKTNEIFLENNIEAVIHFAGFKAVGESTTIPLAYYYNNIISTIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK + E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGV-EAYNLGTGKGYSVLEMVNAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|224534657|ref|ZP_03675229.1| conserved hypothetical protein [Borrelia spielmanii A14S] gi|224513905|gb|EEF84227.1| conserved hypothetical protein [Borrelia spielmanii A14S] Length = 355 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/367 (23%), Positives = 162/367 (44%), Gaps = 64/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VND---LKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + L +ND LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLAEKGHEVLGVDILNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSAKYNNLSFAYLDILNKDKLLELFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSS 155 G F +L+ R++ K++ F+ ST VYG +E++P N P + Sbjct: 121 GFFNVLDVCRVY-------KENIKHFVYASTSSVYG------INENIPSNEDFSTDHPLN 167 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + A+ ++ IP YGPY P+ + L + G + ++ Sbjct: 168 LYAASKKSNEIIAHAYSASFNIPTTGLRFFTVYGPYGRPDMALYLFSDGIKNGKAINIFN 227 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNI 257 +G RD+ YV D +Y VLK + YNIG + K + Sbjct: 228 NGNMARDFTYVSDIANGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLL 287 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + E+ D K+Y + +E D K+K+++G+ + +++ G+ Sbjct: 288 DFIEELEVNFDKKALKNYMPMQKADVVES--------CCDIVKLKNDMGYEAKISIKEGI 339 Query: 318 NKTVCWY 324 + WY Sbjct: 340 KEFSQWY 346 >gi|317129586|ref|YP_004095868.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315474534|gb|ADU31137.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 307 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 43/331 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVID----KLTYAGN---LNSLKEISQSNLFSFL 55 ++VTGG FIGS + ++ + + + K Y G LNSLK+ + F+ Sbjct: 4 ILVTGGLSFIGSYFIK-MIAEKHPHTFITNADRKKSDYNGTEKKLNSLKK------YRFI 56 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ D+ + + L + DAI+ F E D L + + LLE+ R Sbjct: 57 ETDLDDKYSVNN-LFDINYDAIIYF--EDLKDDCTLVPSISKQESDLSVVHLLEQLR--- 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K R + +S+ EV GS K P Y + ++D + ++ TY Sbjct: 111 ------KGKAKRMVYVSSSEVIGSHRK----------PFVSYMGKENTTDLYIRSFFRTY 154 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G P++ ++G + IP IT+ + + +YG+ +R+W+YV+D A+YL Sbjct: 155 GAPIISVKSCCSFGEDQRHSEFIPNVITKAVNNLTIPIYGNEGLIREWVYVKDQCEAIYL 214 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L KGRIG+ Y I + +K+I++V I L +S F + R + Sbjct: 215 ALMKGRIGKTYYIHTSEPKKDIEVVKNI--LARMKRQESLMKCSFPVFTQKRIHKEE--- 269 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D ++ E+GW + L KTV WYL+ Sbjct: 270 -DLISVR-ELGWKMTHTFGAALEKTVQWYLN 298 >gi|221639952|ref|YP_002526214.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131] gi|221160733|gb|ACM01713.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131] Length = 672 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 46/353 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L++D + +V+++D L AG ++L+ + + V R+ Sbjct: 320 VITGGAGFIGSNLADALLSDGE-EVILLDNLGRAGVEDNLRWLKARHGERLHPVIADLRD 378 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 A A+ + A ++ V S+ N GT LLE R Sbjct: 379 ERAMADAARDAAAVYHLAGQTAVTTSLESPVADFEINARGTLNLLEAIRA--------TG 430 Query: 124 DQFRFLQISTDEVYGSLD------------------KGLFSEDMPYNPSSPYSATKASSD 165 L ST++VYG+L+ E P + +PY +K +D Sbjct: 431 RPVPLLFASTNKVYGALEDLEMQPGERHVPADPEILAHGIGEGRPLDFCTPYGCSKGVAD 490 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRD 222 V+ + ++G+P + S YGP F + + + R ++G + ++GDG+ VRD Sbjct: 491 QYVIDYAKSFGLPTAVLRMSCIYGPRQFGTEDQGWVAHFLIRALKGKGISVFGDGRQVRD 550 Query: 223 WLYVEDHV---RALYLVLKKGRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 L+V D V R L + GR+ + +N+GG N ++ EIG L + + Sbjct: 551 VLHVSDAVAAYRRLMAEVSAGRVRSQAFNLGGGPGNAVSLRQVLEEIGRLTGGPV----A 606 Query: 277 HTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 TE ED R G + D+ + + IGW P GL W ++ Sbjct: 607 VTE-----EDWRQGDQLWFVADTRALGTAIGWAPTVGWREGLAGLAAWLAEHR 654 >gi|332558963|ref|ZP_08413285.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N] gi|332276675|gb|EGJ21990.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N] Length = 672 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 46/353 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L++D + +V+++D L AG ++L+ + + V R+ Sbjct: 320 VITGGAGFIGSNLADALLSDGE-EVILLDNLGRAGVEDNLRWLKARHGERLHPVIADLRD 378 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 A A+ + A ++ V S+ N GT LLE R Sbjct: 379 ERAMADAARDAAAVYHLAGQTAVTTSLESPVADFEINARGTLNLLEAIRA--------TG 430 Query: 124 DQFRFLQISTDEVYGSLDKGLF------------------SEDMPYNPSSPYSATKASSD 165 L ST++VYG+L+ E P + +PY +K +D Sbjct: 431 RPVPLLFASTNKVYGALEDLTMQPGERHVPADPEILAHGVGEGRPLDFCTPYGCSKGVAD 490 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRD 222 V+ + ++G+P + S YGP F + + + R ++G + ++GDG+ VRD Sbjct: 491 QYVIDYAKSFGLPTAVLRMSCIYGPRQFGTEDQGWVAHFLIRALKGEGISVFGDGRQVRD 550 Query: 223 WLYVEDHV---RALYLVLKKGRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 L+V D V R L + GR+ + +N+GG N ++ EIG L + + Sbjct: 551 VLHVSDAVAAYRRLMAEVSAGRVRSQAFNLGGGPGNAVSLRQVLEEIGRLTGGPV----A 606 Query: 277 HTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 TE ED R G + D+ + + IGW P GL W ++ Sbjct: 607 VTE-----EDWRQGDQLWFVADTRALGAAIGWAPTVGWREGLAGLAAWLAEHR 654 >gi|309388614|gb|ADO76494.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM 2228] Length = 317 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 29/328 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ ++TG AGFIGS L L+ + QV+ +D + SLKE + S+ F+ + Sbjct: 1 MKSLITGAAGFIGSTLTEKLLKEGH-QVIGVDCFIDYYD-RSLKENNMSSFIDHENFTLI 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRL 113 + +I + + ++S LK+ D I + AA++ V RS G D I T NI+GT LLE R Sbjct: 59 EYNINELD-LKSLLKDV--DYIFHQAAQAGV-RSSWGEDFEIYTHNNIMGTQRLLEAARG 114 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 S KK F+ S+ VYG DK E P SPY +K + + L + Sbjct: 115 -----SNIKK----FVYASSSSVYGDTDKLPMKETNRLQPVSPYGVSKLAGENLCYLYYK 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + +P + +G P+ + I +++ + ++GDG+ R++ +V+D V+A Sbjct: 166 NFNVPTVSLRYFTVFGERQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVDDIVKAN 225 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + GE +NIGG+ +R ++ L++ +I K ++ E + ++ G + Sbjct: 226 ILAAESDVEGENFNIGGDGKRVVLNDAIS---LMEKIIGKK-ANREYQKVVK---GDVKH 278 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 + D+SK K + + + E+GL + + Sbjct: 279 TSADTSKAKKLLNYEAEIKFENGLEREI 306 >gi|148380637|ref|YP_001255178.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|153932582|ref|YP_001384921.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935643|ref|YP_001388390.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|148290121|emb|CAL84240.1| putative UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|152928626|gb|ABS34126.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931557|gb|ABS37056.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] Length = 305 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFI S L L++ + V +ID L+ GN+N++ + ++ + L +I Sbjct: 1 MKILVTGGAGFIASNLVDKLIS-MGNDVCIIDNLS-TGNINNVNKKARLYINDILDSNIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + K+ + D + +FAA+ V +SI NI GT +L+ SC+ Sbjct: 59 N------IFKKEKFDIVYHFAAQIDVQKSIKDPMFDSNVNICGTVNILK------SCVDY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG E P S Y +K + + + ++ Y + Sbjct: 107 GVK---KIIYPSSAAVYGQPGYLPIDEKHRVKPISSYGLSKYTPEEYIRSFSELYNLDYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ ++ + + R+ + + ++GDG+ +RD++YVED V A L Sbjct: 164 IFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G +NIG D+ ++D + K SH E + E R G + + Sbjct: 224 YNGS-RNLFNIGTGVYITVKDLA---QMMIDTM--KVQSHIE---YQEARKGDIEKSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K K E+ W P+ +++ GL KT+ +Y +N Sbjct: 275 IEKAKVELKWEPKYSLQKGLIKTINYYKNN 304 >gi|229490919|ref|ZP_04384754.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis SK121] gi|7110453|gb|AAF36926.1|AF221951_2 putative UDP-galactose 4-epimerase GalE [Rhodococcus erythropolis] gi|229322309|gb|EEN88095.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis SK121] Length = 329 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 M+L+VTGGAG++GS +C ++ + +V+VID L+ GN +++ ++ F++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLERGHEVVVIDDLS-TGNADAVPAGAE-----FIEGDVG 53 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + SA D +++FAA+S V S+L +++ N++ T LLE R+ + Sbjct: 54 ALAADVLGSAGSPVF-DGVLHFAAQSLVGESVLHPEKYWRGNVVTTIELLEAIRVSGTP- 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST YG ++ E P P++PY ATK + D+ + ++ +G+ Sbjct: 112 --------RLVFSSTAATYGEPEQSPIVETAPTRPTNPYGATKLAIDHAITSYSIAHGLG 163 Query: 179 VLLSNCSNNYGPYH-------FPEKLIPLAITRMIEG-SHVFLYG------DGQNVRDWL 224 N G Y LIPL + +E + ++G DG VRD++ Sbjct: 164 ATSLRYFNVAGAYKSAGENRVIETHLIPLVLQVALEQRDKISVFGTDWPTPDGTAVRDYI 223 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 +V D A L L+ GE YN+G GF + +I T L Sbjct: 224 HVLDLAEAHLLALESSVPGEHRIYNLGSGA-----------GFSVREVIAACARVTGLPI 272 Query: 283 FIED---RPGHDRRYAIDSSKIKSEIGWFPQEN 312 +ED R G S K +E+GW P Sbjct: 273 NVEDASRRLGDPAVLIASSDKAIAELGWTPTRT 305 >gi|54307428|ref|YP_128448.1| putative nucleotide sugar epimerase [Photobacterium profundum SS9] gi|46911848|emb|CAG18646.1| putative nucleotide sugar epimerase [Photobacterium profundum SS9] Length = 334 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIGSA+ L +V+ ID L Y +L + + ++ + F+F+++ Sbjct: 1 MKYLVTGAAGFIGSAVSERLCAQGH-EVIGIDNLNDYYDVSLKHARLDRAEHDKFTFVEL 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ + + + Q D +++ AA++ V SI + +N++G +LE C Sbjct: 60 DLADRDGMAALFADQQFDRVIHLAAQAGVRYSIDNPMAYADSNLVGHLAILE------GC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSSPYSATKASSDYLVLA 170 K + S+ VYG ++ MP+N P S Y+ATK S++ + Sbjct: 114 RHNKVK---HLVYASSSSVYG------LNQKMPFNTSDSVDHPISLYAATKKSNELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H Y +P YGP+ P+ + +++G + +Y +G RD+ Y++D V Sbjct: 165 YSHLYDVPTTGLRFFTVYGPWGRPDMALFKFTKAIVDGETIDVYNNGDMRRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + ++ G YNIG + K +D I L DAL Sbjct: 225 EGVMRIQDVIPQKNPDWTVEAGSPATSSAPYKVYNIGHGSPVKLMDY---IEALEDALGI 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + F+ +PG D+ + I + P ++ G+ V WY Sbjct: 282 EAKKN-----FMPMQPGDVYATYADTEDLFKTINYQPAVKVKEGVKAFVDWY 328 >gi|283832549|ref|ZP_06352290.1| UDP-glucuronate 5'-epimerase [Citrobacter youngae ATCC 29220] gi|291072216|gb|EFE10325.1| UDP-glucuronate 5'-epimerase [Citrobacter youngae ATCC 29220] Length = 334 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 154/356 (43%), Gaps = 56/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+ +VTG AGFIG + + L+ + QV+ ID NLN ++S Q+ L Sbjct: 1 MKYLVTGAAGFIGFHVSKRLL-EAGHQVVGID------NLNDYYDVSLKQARLGLLVHPG 53 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F ++D+ DRE + + D +++ AA++ V S+ + +N+ G +LE Sbjct: 54 FHFHKIDLADRESMSALFASGHFDRVIHLAAQAGVRYSLENPHAYADSNLTGFLNILEGC 113 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R K Q L S+ VYG K FS D + P S Y+ATK +++ + Sbjct: 114 R--------HNKIQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHT 164 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H YG+P YGP+ P+ + M+EG + +Y G+ RD+ Y++D Sbjct: 165 YSHLYGLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIA 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIV--FEIGFLLDAL 270 A+ + ++ G YNIG ++ + +D + E +DA Sbjct: 225 EAIIRLQDVIPQADSQWTVETGTPAASIAPWRVYNIGNSSPVELMDYIKALEEALGIDA- 283 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D+ + IG+ P+ + G+ V WY D Sbjct: 284 ---------TKNMLPLQPGDVLETSADTKALYDVIGFKPETTVRDGVRNFVDWYRD 330 >gi|255007633|ref|ZP_05279759.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis 3_1_12] gi|313145326|ref|ZP_07807519.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134093|gb|EFR51453.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 350 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/368 (23%), Positives = 160/368 (43%), Gaps = 68/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------------- 47 M+++VTG AGFIG +C+YL+ L D++ N+N+ +++ Sbjct: 1 MKILVTGAAGFIGFYVCKYLL-------LRGDEVIGLDNINTYYDVNIKYGRLKNLGIER 53 Query: 48 ------------QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE 95 Q F F+++++ DR+ I S D +VN AA++ V SI Sbjct: 54 KIITWHRFIVSVQYEKFRFIRMNLEDRQAIESLFANENFDVVVNLAAQAGVRYSIENPYI 113 Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS 154 ++ +N+ G +LE R C + + S+ VYG K FSE D +P Sbjct: 114 YVQSNVDGFLNILEGCR---HCKIK------HLVYASSSSVYGLNTKVPFSEMDGIAHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+ATK ++ + + + Y IP YGP+ P+ L M+ + ++ Sbjct: 165 SLYAATKKMNELMAHTYSYLYDIPTTGLRFFTVYGPWGRPDMSPFLFADAMLHKYPIKVF 224 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKK---------GRIGER---------YNIGGNNERKN 256 +G +RD+ Y+ D V + ++ + G + YNIG + K Sbjct: 225 NNGNMLRDFTYINDIVEGIIRIIDRIPTSNSEWNGEFPDPSSSIVPYKIYNIGNSEPVKL 284 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +D + I ++ YS ++ F+ +PG + D++ ++ E+ + P ++ G Sbjct: 285 MDFIKTIEEVI------GYSAKKI--FLPMQPGDVYQTYADTTTLQEELKFKPNTPIQEG 336 Query: 317 LNKTVCWY 324 + +T+ WY Sbjct: 337 VKETIDWY 344 >gi|124485732|ref|YP_001030348.1| pyridoxal-5'-phosphate-dependent enzyme, beta subunit [Methanocorpusculum labreanum Z] gi|124363273|gb|ABN07081.1| NAD-dependent epimerase/dehydratase [Methanocorpusculum labreanum Z] Length = 307 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 35/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFI S + L+ V ++D ++ AG+ +++ ++ F++ + Sbjct: 1 MQYLITGGAGFIASHIAEELIRK-NHDVTLLDDMS-AGSTKNIQPDAE-----FIKGSVT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + K + I + AA + V +SI N GT + L+ Sbjct: 54 DRPLLAEICKTHSFEGIFHLAAVASVQKSIEDPLLVHEVNATGTL----------NILNA 103 Query: 121 DKKDQFRFLQISTDEV-YGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K+ R + +S YG D +F EDM P SPY+ +K +++ + +G+ Sbjct: 104 AKEHGIRKVVLSASAAAYG--DNPVFPKREDMLPEPLSPYAVSKITAEMYCRNFADLFGV 161 Query: 178 PVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 N +GP P +IP R++ ++GDG RD+++V+D V A Sbjct: 162 ETTALRYFNVFGPRQDPNAEYAAVIPKFTERIVHDKKPVIFGDGNQTRDFVFVKDVVLAN 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + G +NIG + D L +I ++ + I + RPG R Sbjct: 222 MLAMNSHTCG-TFNIGTGIQTSLND--------LAGMIMRAAGISCDIIYEAPRPGDIRY 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK K E+G+ P+ ++E G+ +TV ++ D Sbjct: 273 SVADISKAKPELGYAPKYSIEDGIKETVEYFRD 305 >gi|186894380|ref|YP_001871492.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis PB1/+] gi|23321103|gb|AAN23044.1|AF461768_13 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] gi|23321120|gb|AAN23060.1|AF461769_13 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] gi|23321133|gb|AAN23072.1|AF461770_12 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] gi|186697406|gb|ACC88035.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis PB1/+] Length = 342 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/326 (29%), Positives = 150/326 (46%), Gaps = 32/326 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GNLNSLKE-ISQSNLFSFLQVDIC 60 +++TG G +GS L Y++ + V+ + + + N+ L + I++ + S D+ Sbjct: 4 VLITGFTGQVGSQLADYILENTDDHVIGMMRWQESMDNIYHLTDRINKKDRISIQYADLN 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +P I + AA+S S E + TNIIGT LLE R Q Sbjct: 64 DLMSLYNLIDTVRPKFIFHLAAQSFPRTSFDIPIETLQTNIIGTANLLECIR---KLKQQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D D + S+ EVYG G +ED ++ +SPYS +K +DYL +G YGI Sbjct: 121 DGYDPVVHV-CSSSEVYGRAKVGEALNEDTQFHGASPYSISKIGTDYLGQFYGEAYGIRT 179 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHV---FLYGDGQNVRDWLYVEDHVRAL 233 ++ + GP F E + I +IE H G+ +VR + D VRA Sbjct: 180 FVTRMGTHTGPRRSDVFFESTVAKQIA-LIEAGHQEPKLKVGNLASVRTFQDARDAVRAY 238 Query: 234 YLVL---KKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-- 286 YL+ KG I GE +NI G D F++ +++ L+ S+S I + D Sbjct: 239 YLLALESGKGNIPNGEVFNIAG-------DEAFKLPEVIELLL--SFSTRNDIEVVTDTD 289 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP DS+KIKS I W P+ Sbjct: 290 RLRPIDADYQMFDSTKIKSYINWKPE 315 >gi|124515915|gb|EAY57424.1| UDP-glucose 4-epimerase [Leptospirillum rubarum] Length = 316 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L R L+ + +V V+D + G +L E+ S ++ D+ Sbjct: 1 MRYLVTGGAGFIGSHLVRALLENGH-EVRVLDNFS-TGKEENLAEL--SGRIDVIRGDVR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I AL+ + + AA V RSI + T N+ GT L LW Sbjct: 57 SFADIEKALEGVT--FVFHQAAVGSVPRSIADPFDTQTANVNGTLNL-----LW------ 103 Query: 121 DKKDQF---RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K +F R + + VYG E + +P SPY+ +K S + + T+G+ Sbjct: 104 -KAKEFGVQRVVIAGSSSVYGDTPGMPRVETLLPSPLSPYALSKLSQELFGKIFSKTFGL 162 Query: 178 PVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP P +IP + +++ V + G G+ RD+ ++++ V+A Sbjct: 163 DTVTLRYFNIFGPRQDPRSEYAAVIPRFVRAILKKDAVTINGTGEQSRDFTFIDNVVQAN 222 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L ++ R IGE +NIG + +++V + +L + P+ +R + R G Sbjct: 223 LLAMETTRGIGEAFNIGCGSSFSILELVDHLSDIL-GVRPE-------VRHLPPRAGDPM 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + +G+ P+ GL +T W+ Sbjct: 275 ASQADISKARDLLGYSPKVYFREGLERTARWF 306 >gi|282899644|ref|ZP_06307608.1| GDP-mannose 4,6-dehydratase [Cylindrospermopsis raciborskii CS-505] gi|281195523|gb|EFA70456.1| GDP-mannose 4,6-dehydratase [Cylindrospermopsis raciborskii CS-505] Length = 359 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 + ++TG G GS L +L+ +V I + T N + + I Q FL Sbjct: 6 KALITGITGQDGSYLSEFLLEK-GYEVHGIIRRTSTFNTDRIDHIYEDPHQEGARFFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E +P I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVKPVEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAVRDY-- 122 Query: 117 CLSQDKKD-QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q++ Q RF Q + E+YG + SE P+ P SPY+ K + + + + +Y Sbjct: 123 ---QNRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTINYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ N+ P F + I A++R++ G LY G+ RDW Y +D+VR Sbjct: 180 GLFACNGILFNHESPRRGETFVTRKITRAVSRIVAGKQNKLYMGNLDAKRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNE--RKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 A++L+L+K + + G R+ +D+ F SY + + ++E Sbjct: 240 AMWLMLQKEQPDDYVIATGETHSVREFLDLAF------------SYVNLKWEDYVEFDQR 287 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP DS+K + ++ W P E Sbjct: 288 YLRPAEVDLLIGDSTKARQKLSWQPSVTFE 317 >gi|206563875|ref|YP_002234638.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] gi|198039915|emb|CAR55892.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] Length = 329 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/345 (24%), Positives = 143/345 (41%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG+IGS C+ L + + + D L+ G+ ++++ + DI Sbjct: 1 MKVLVTGGAGYIGSHTCKALA-EAGHEPVAYDNLS-TGHRDAVR------WGPLVAADIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + AL +PD +++FAA ++V S+L + + T N+ GT LL R Sbjct: 53 DRDALSRALAAHRPDVVIHFAALAYVGESVLAPERYYTVNVTGTCTLLSAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 R + S+ YG + SE P P +PY TK + + + + YG+ Sbjct: 105 -AAGVGRIVMSSSCATYGIPEALPISERTPQRPINPYGFTKYAMERMAADFERAYGLKWI 163 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 ++ G H PE +PLAI + F + G DG +RD++ Sbjct: 164 ALRYFNAAGADPDGAIGECHAPETHALPLAIRAALRTGDAFRVMGTDYPTPDGSAIRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++A L G N+G N + + + + +P Sbjct: 224 HVSDLADAHLKA-SAYLCGGGPSVALNLGTGNGTSVLAALRAVEAVTGRRVPTV------ 276 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++ +GW P+ +E + W+ Sbjct: 277 --LAARRPGDPPALYADATMAARVLGWRPRFTAIEPMVEHAAAWF 319 >gi|329960507|ref|ZP_08298895.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] gi|328532737|gb|EGF59524.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] Length = 312 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V+GGAGFIGS LC L+ + +V+ +D L + G+ ++ + + LF F+ D+ Sbjct: 3 KILVSGGAGFIGSHLCMRLIKEGH-KVICLDNL-FTGSEENIAHLKGNPLFKFVHHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E D I N A + A + I T+++G LLE Sbjct: 59 -----EYPYEADVDEIYNLACPASPVHYQYDAIKTIKTSVLGAINLLELA---------- 103 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 KK + LQ ST E+YG +G + P S Y K S+ L + + G Sbjct: 104 KKTNAKILQASTSEIYGDPMIHPQVEGYWGNVNPIGIRSCYDEGKRCSETLFMDYHRQAG 163 Query: 177 IPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ + + ++G+ + +YG GQ R + YV+D + + Sbjct: 164 LRIKIIRIFNTYGPRMLPGDGRVVSNFVVQALQGNDITIYGSGQQTRSFQYVDDLIEGMV 223 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ + N+G NE F I L + +I + S+++L+ + P D + Sbjct: 224 RMMDTEDDFTGPVNLGNPNE-------FSILELAEKVIKLTNSNSKLV--FKPLPHDDPK 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + K+++GW P +E GL+ + ++ Sbjct: 275 QRQPDITLAKAKLGWKPTIELEDGLHHIIEYF 306 >gi|58039614|ref|YP_191578.1| UDP-N-acetylglucosamine 4-epimerase [Gluconobacter oxydans 621H] gi|58002028|gb|AAW60922.1| UDP-N-acetylglucosamine 4-epimerase [Gluconobacter oxydans 621H] Length = 322 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 38/339 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIG + R L+ ++V+ +D L A L+++ FSFL+ Sbjct: 1 MKVLVTGVAGFIGFHVARALLKQ-GMEVVGVDTLNAYYDPALKAARLEQLEPYPGFSFLK 59 Query: 57 VDICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 VD+ ++ + + +++ AA++ V S++ ++T+N++G LLE R Sbjct: 60 VDVASPAAMQDLVARHSDLEGVIHLAAQAGVRHSMVDPYSYVTSNVMGQVALLEACR--- 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 K + S+ VYG F E D PSS Y+ TK +++ + ++ + Sbjct: 117 -----HLKKLTHVVYASSSSVYGRNQSVPFRETDRVERPSSVYAVTKRAAELMSESYAYL 171 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +GIP YGP+ P+ + EG V LY RD+ Y++D VR + Sbjct: 172 HGIPQTGLRFFTVYGPWGRPDMAYYGFAKAISEGRPVTLYEGKHLSRDFTYIDDIVRGVQ 231 Query: 235 LVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 VL + + N+GG+ + + I L L K+ F+E RP Sbjct: 232 QVLGRPPEAGMSRVLNLGGDKPER---VTRMIELLEQNLGKKA--------FVERRP--- 277 Query: 292 RRYA-IDSS-----KIKSEIGWFPQENMESGLNKTVCWY 324 R A ++S+ ++ GW P + E G+ + W+ Sbjct: 278 RPVADMESTWASLENVREFCGWKPAVSFEDGMKEFCLWF 316 >gi|270294210|ref|ZP_06200412.1| nucleoside-diphosphate-sugar epimerase [Bacteroides sp. D20] gi|270275677|gb|EFA21537.1| nucleoside-diphosphate-sugar epimerase [Bacteroides sp. D20] Length = 324 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 166/345 (48%), Gaps = 42/345 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVDI 59 +++VTGGAGFIGS LC +L+ + +V+ +D + G++++++ + + F+ ++ DI Sbjct: 3 KILVTGGAGFIGSNLCEHLLEN-GYEVICLDNFS-TGHMSNIQHLLDNFPTHFTLIEGDI 60 Query: 60 CDRE-CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWS 116 + E CIR++ D+I++ AA + RSI D+ ITTN IG F+ + Sbjct: 61 RNIETCIRASKGV---DSILHEAALGSIPRSI---DDPITTNDVNIGGFLNM-------- 106 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ + RF+ ++ YG + ED P SPY+ TK + + TYG Sbjct: 107 LVAAKDNNVKRFIFAASSSTYGDSTELPKVEDRIGKPLSPYALTKYVDELYAEVFAKTYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I + N +G P +IPL I + + + GDG N RD+ Y+++ + Sbjct: 167 IEYIGLRYFNVFGRRQDPNSTYAAVIPLFIKQYLNHQQPKINGDGLNTRDFTYIDNVIHM 226 Query: 233 LYLVL---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE-LIRFIEDRP 288 L L + I + YN G E+ +I+ LD LI S + I ++ Sbjct: 227 NMLALNSSNQSSINQIYNTAG-GEQTSIN-------QLDYLIKDVLSQYDPFISSVDPIY 278 Query: 289 GHDRRYAIDSS-----KIKSEIGWFPQENMESGLNKTVCWYLDNN 328 G +R I S K K +G+ P + + GL KT+ WY++N+ Sbjct: 279 GPNRIGDIQHSFACIDKAKLLLGYTPLVSFKEGLIKTIEWYVNNH 323 >gi|329114555|ref|ZP_08243314.1| UDP-glucose 4-epimerase [Acetobacter pomorum DM001] gi|326696035|gb|EGE47717.1| UDP-glucose 4-epimerase [Acetobacter pomorum DM001] Length = 328 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 145/335 (43%), Gaps = 59/335 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAG++GS + L++D V+V+D NL + + +F+Q DI D Sbjct: 3 RFLVTGGAGYVGSHVVLALLDDGH-DVVVLD------NLRTGHRAAVPEQATFVQGDISD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +C+ L D I++FAA S V S+ ++T N F L++ +C+ Sbjct: 56 IDCLDKVLSSGTWDGILHFAALSLVGESMQNPMMYMTANAGYGFGLID------ACVRHG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAWGHTYGIP 178 K RF+ ST ++GS +G +ED P NP SPY +K Y+V L W I Sbjct: 110 VK---RFVFSSTANLFGSAGEGPINEDAPINPGSPYGESK----YMVERALYWADK--IH 160 Query: 179 VLLSNC-----------SNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQN 219 L S C + G H PE LIPL I ++ L+G DG Sbjct: 161 GLKSACLRYFNAAGADPAGRAGEDHRPETHLIPLVIDAALKRRPALTLFGEDYPTPDGTC 220 Query: 220 VRDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +RD+++V D RA VL K + +N+G N +I+ +G + + +P Sbjct: 221 IRDYVHVTDLARAHLAVLPLLNDKSVV---FNVGTGRGNSNREIIDAVGRVSNLEVPWQA 277 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G +++ GW P+ Sbjct: 278 G--------PRRAGDPASLVASPARLMEATGWAPE 304 >gi|312110507|ref|YP_003988823.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] gi|311215608|gb|ADP74212.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] Length = 328 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 143/332 (43%), Gaps = 54/332 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L+ + +V+V+D NL + + F Q DI DR Sbjct: 2 ILVCGGAGYIGSHAVYRLIEKGE-KVIVVD------NLQTGHREAVHPEAVFYQGDIRDR 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R ++ + D +++FAA S V S+ ++ N+ GT +LLE Sbjct: 55 AFLRDVFRKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVM----------- 103 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++F QI ST VYG + E P P++ Y TK + + ++ YGI Sbjct: 104 -NEFGVKQIVFSSTAAVYGEPKQIPIVETDPTMPTNTYGETKLAMEKMMKWVDRAYGIRY 162 Query: 180 LLSNCSNNYGPY-------HFPE-KLIPLAITRMI---EGSHVFL----YGDGQNVRDWL 224 + N G Y H PE LIPL + + E H+F DG +RD++ Sbjct: 163 ISLRYFNVAGAYGTLIGEDHDPETHLIPLILKVPLGQREAIHIFGDDYDTHDGTCIRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIP---KSYSHT 278 +V D V A L ++K R G YN+G N GF + +I K H Sbjct: 223 HVLDLVDAHILAVEKLRSGAESNVYNLGNGN-----------GFTVKEVIEAARKVTGHP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R RPG + + K K E+GW P+ Sbjct: 272 IPARVRARRPGDPAKLVASAEKAKRELGWEPK 303 >gi|315498288|ref|YP_004087092.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] gi|315416300|gb|ADU12941.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] Length = 337 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 15/238 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR+ +TG AGFIG L + L+ + + D +T Y L ++ + + ++ + Sbjct: 1 MRVFITGTAGFIGFHLAQRLLTEGHT-IHGYDGMTEYYDVRLKRARVERLKSAPQYTHTE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + + +A + QP+ I++ AA++ V S+ ++ TN+IG+F +LE RL Sbjct: 60 AMLENMDALMTAAEACQPEIIIHLAAQAGVRYSLEQPRTYVNTNVIGSFNILEVARLL-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q L ST VYG+ +K F E D P + Y+ATK S + + ++ H + Sbjct: 118 ------KPQ-HLLLASTSSVYGANEKVPFEEVDKTDEPMTLYAATKKSMEVMAHSYAHLW 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 IP YGPY P+ + + + +YG GQ+ RD+ Y++D V A+ Sbjct: 171 KIPTTAFRFFTVYGPYGRPDMALFKFVNAADRNEAIDVYGMGQHARDFTYIDDLVEAI 228 >gi|146339114|ref|YP_001204162.1| putative CDP-tyvelose-2-epimerase [Bradyrhizobium sp. ORS278] gi|146191920|emb|CAL75925.1| putative CDP-tyvelose-2-epimerase [Bradyrhizobium sp. ORS278] Length = 353 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 98/352 (27%), Positives = 149/352 (42%), Gaps = 54/352 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFLQVDI 59 +++TGG GFIG L L VL++D L AG ++E +Q S + + + Sbjct: 11 IVITGGCGFIGCNLADRLATRGD-HVLILDNLARAG----VRENAQWLKSRHGDRITITV 65 Query: 60 CD-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D RE I Q A+++ AA+ V S+ + N GT +LE RL Sbjct: 66 GDIREPITVIDTVKQAKAVLHLAAQVAVTSSLDNPVDDFEINARGTLNVLEAVRL----- 120 Query: 119 SQDKKDQFRFLQISTDEVYG--------------------SLDKGLFSEDMPYNPSSPYS 158 L ST++VYG +L +G+ SE + SPY Sbjct: 121 ---HNAAAPVLFASTNKVYGRLIDDDAIARIGQRYQPISTTLTQGV-SEQTSLDLYSPYG 176 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYG 215 +K ++D V + YG+ + S YGP F + I + + G+ + +YG Sbjct: 177 CSKGAADQYVHDYARVYGLNTAVLRMSCIYGPRQFGNEDQGWIAHFVLSALRGAALTIYG 236 Query: 216 DGQNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGG--NNERKNIDIVFEIGFLLDALI 271 DG VRD LYV D V A VL + G +N+GG +N ++++ +IG L Sbjct: 237 DGCQVRDALYVADAVDAWLAVLDQIEATRGRVFNLGGGPSNAISLLELIDQIGQLSG--- 293 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 P +YS F + RPG Y D + GW P+ + GL + W Sbjct: 294 PVNYS------FSDWRPGDQPWYVTDIGALAGATGWRPRTSFVEGLRELHGW 339 >gi|82701405|ref|YP_410971.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC 25196] gi|82409470|gb|ABB73579.1| NAD-dependent epimerase/dehydratase [Nitrosospira multiformis ATCC 25196] Length = 350 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 30/336 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL---FSFLQVD 58 +VTG AGFIGS L L+ + +V+ +D + Y NL ++++ FSF++ D Sbjct: 19 LVTGVAGFIGSNLLEALLKHNQ-KVVGLDNFSTGYLRNLEQIRDLVGEKAWGNFSFIEGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC E +A + D +++ AA V RSI NI G +L +R Sbjct: 78 ICQLETCTNACQGV--DFVLHQAALGSVPRSIQDPIRTNEANISGFLNMLVASR------ 129 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + + RF+ ++ YG E + P SPY+ TK ++ + YG+ Sbjct: 130 --DAQVR-RFIYAASSSTYGDHPDLPKVEAVIGRPLSPYAVTKYVNELYAEVFARCYGLD 186 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +GP P +IP ++ +I +++ GDG+ RD+ Y+++ V+A Sbjct: 187 SIGLRYFNVFGPRQDPNGAYAAVIPQWVSALIRNQTLYINGDGETSRDFCYIDNVVQANL 246 Query: 235 LVL---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPG 289 L G + + YN+ NER +++ ++ G + + L+ K + E R +++ R G Sbjct: 247 LAALSDNTGAVNQIYNV-AVNERTSLNQLY--GMMRELLLEK-FPELENHRPTYVDFRKG 302 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R D +K +G+ P + GL + + WY+ Sbjct: 303 DVRHSQADITKATQLLGFEPSHRIGEGLRQAMGWYI 338 >gi|52145257|ref|YP_086714.1| UDP-glucose 4-epimerase [Bacillus cereus E33L] gi|51978726|gb|AAU20276.1| UDP-glucose 4-epimerase [Bacillus cereus E33L] Length = 338 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|165872504|ref|ZP_02217137.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0488] gi|227818220|ref|YP_002818229.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CDC 684] gi|254755925|ref|ZP_05207957.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Vollum] gi|164711727|gb|EDR17271.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0488] gi|227004705|gb|ACP14448.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CDC 684] Length = 338 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 159/352 (45%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V +S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGQSTTTPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|116620493|ref|YP_822649.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116223655|gb|ABJ82364.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 313 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 154/333 (46%), Gaps = 37/333 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V+G AGF+GS +C L+N+ V + + LT G+ +L + + F++ DI Sbjct: 1 MRIVVSGSAGFVGSHMCERLLNEGHSVVALDNFLT--GSPANLAHLEKHPRLQFVEQDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + A+ D +VN A+ + + E + IG+ +LE L+ Sbjct: 59 RPFTVDGAV-----DCVVNMASPASPKDYLEYPIETLDVGSIGSRNMLE--------LAL 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K R+L ST E YG E P P S Y +K ++ + +A+ + Sbjct: 106 AKG--ARYLVTSTSECYGDPMVHPQVETYWGNVNPVGPRSCYDESKRFAEAITMAYHRKH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ ++ N YGP + +++P + + + G + ++G G R + YV D V L Sbjct: 164 GVRTNIARIFNTYGPRMKLDDGRVVPAFLDQALRGEPMTVFGTGSQTRSFCYVSDLVDGL 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 Y +++ ERY + N R+ + E + A+ + + +E+I ED P Sbjct: 224 YRLMQS---DERYPVNLGNPREM--TILEFAEHIRAM---TGTKSEIIFHPLPEDDP--- 272 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D +K +S +GW P+ ++E GL TV ++ Sbjct: 273 KQRKPDITKARSVLGWEPRISLEDGLRDTVEYF 305 >gi|260174461|ref|ZP_05760873.1| NAD dependent epimerase [Bacteroides sp. D2] gi|315922728|ref|ZP_07918968.1| NAD dependent epimerase [Bacteroides sp. D2] gi|313696603|gb|EFS33438.1| NAD dependent epimerase [Bacteroides sp. D2] Length = 324 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGFIGS LC ++ ++ +V +D L+ G ++ + + F++ DI + Sbjct: 14 FLVTGAAGFIGSNLCEAIL-EMGYRVRALDDLS-TGKQKNIDMFFDNPRYEFIKGDIKEL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +A + D I+N AA V RSI + NI GT +LE R + Sbjct: 72 DTCMTACENV--DYILNQAAWGSVPRSIEMPLFYSLNNIQGTLNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ S+ VYG E + N SPY+ TK + + YG+ Sbjct: 121 NGVKKFVYASSSSVYGDEPNLPKKEGVEGNLLSPYAVTKCCDEEWAKQYTRHYGLDTYGM 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--LYLV 236 N +G P+ +IP + +I G + GDG+ RD+ Y+E+ + A + Sbjct: 181 RYFNVFGRRQDPDGAYAAVIPKFLKLLINGQKCRINGDGKQSRDFTYIENVIEANLKACL 240 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+ +NI IDI + + L I F DR G + Sbjct: 241 APSSAAGQAFNIAYGGREYLIDIYYGLTKALGVDIEP--------EFGPDRVGDIKHSHA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK K +G+ P + E G+ + WY +N Sbjct: 293 DISKAKELLGYEPNWSFERGIEAAIQWYKEN 323 >gi|307592061|ref|YP_003899652.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822] gi|306985706|gb|ADN17586.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822] Length = 319 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 30/330 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIG+ L L ++ + + + SLKE + + S D+ D Sbjct: 5 RVLITGGAGFIGTHLAERLSQYTEVVLFDSFRRNSLSLIPSLKEHPKIKVISG---DVLD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 IR AL D +++ AA + V + + + NI+GT LLE + Sbjct: 62 PSSIRLALDGV--DTVIHLAAIAGVSSYYQESLQTLRVNILGTSNLLE---------AAA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHTY 175 K+ F+ ST E+YGS + E+ PY S Y+ +K + + L + + Sbjct: 111 KQKIKMFVHFSTSEIYGS-NALWVDEESPYIIGSVSDRRWVYATSKLAGENFSLRYAEAF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YGP E I + G + +YGDG +R W Y+ D V A+ + Sbjct: 170 DFACTTVRPFNIYGPRQVGEGAISNFCRAISSGQPMKIYGDGSAIRAWCYISDLVDAVEM 229 Query: 236 VLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +LK G+ +NIG + + E+ + +IP++ E ++ E + R Sbjct: 230 ILKIPDAAGQAFNIGNPSA---VATTLELAQQMAKIIPEATFKYEQVKRSEIKA---RIP 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +I+ K + +G+ P+ +E+GL +T W+ Sbjct: 284 SIN--KAQQLLGYEPKIGLETGLRRTFEWF 311 >gi|257867696|ref|ZP_05647349.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257874023|ref|ZP_05653676.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257876602|ref|ZP_05656255.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] gi|257801779|gb|EEV30682.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257808187|gb|EEV37009.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257810768|gb|EEV39588.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] Length = 332 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 45/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ K QV+V+D L G+ ++ + +F + DI Sbjct: 1 MAILVLGGAGYIGSHAVDQLIEQGK-QVVVVDNL-LTGHRQAIHPAA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ ++S ++ D +++FAA S V S+ ++ N+ G +LLE Sbjct: 54 DKAFLQSVFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVM--------- 104 Query: 121 DKKDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K+ Q + + ST YG D +E+ P NP +PY +K + ++ YG+ Sbjct: 105 -KEHQVKHIVFSSTAATYGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKY 163 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 V + + G H PE L+P+ + + + V ++G DG VRD+ Sbjct: 164 VALRYFNVAGAKSDASIGEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTPDGTCVRDY 223 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++VED + A L L+KG +N+G N+ ++V + IP Sbjct: 224 VHVEDLIAAHLLALEYLQKGNESNVFNLGSNHGYSVKEMVEAARNVTKKEIPA------- 276 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R R G S K + +GW P Sbjct: 277 -RVAPRRAGDPSTLVASSEKARKVLGWKP 304 >gi|198273938|ref|ZP_03206470.1| hypothetical protein BACPLE_00072 [Bacteroides plebeius DSM 17135] gi|198273016|gb|EDY97285.1| hypothetical protein BACPLE_00072 [Bacteroides plebeius DSM 17135] Length = 343 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 47/354 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNL- 51 M+++VTG AGFIGS L +++ +V+ ID +L Y E + +L Sbjct: 1 MKILVTGAAGFIGSRLM-FMLASRNYEVVGIDNINDYYDVRLKYGRLKECGFEFIEDDLS 59 Query: 52 ------------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 F+++ I D+ + ++ Q D +VN AA++ V SI ++ + Sbjct: 60 WGVAVFNNRFPNCRFIRMSIDDKFSMEVLFRKEQFDKVVNLAAQAGVRYSITNPYAYLQS 119 Query: 100 NIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYS 158 N+ G +LLE R + + S+ VYG K +SE D P S Y+ Sbjct: 120 NLTGFLVLLECCRTYHVK---------HLIFASSSSVYGLNKKVPYSENDQVDTPVSLYA 170 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQ 218 A+K +++ + ++ YGI + YGP+ P+ L + G + ++ G Sbjct: 171 ASKKANELMAHSYSKLYGISMTGLRYFTVYGPWGRPDMAPMLFAKAIFAGQPINVFNQGD 230 Query: 219 NVRDWLYVEDHVRALYLVLKK-------GRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 +RD+ Y++D V V++ G YNIG ++ K +D + I Sbjct: 231 LMRDFTYIDDIVEGTLRVVEHTPNLNMDGVSYRIYNIGCSSPIKLMDFI--------QTI 282 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 ++ T F+ +PG + D+S+++ E+ + P ++ G+ + + WYL Sbjct: 283 EQAIGKTAQKNFLPMQPGDVYQTYADTSRLEKELNYKPCVSLHEGIARFIKWYL 336 >gi|329298868|ref|ZP_08256204.1| NAD-dependent epimerase/dehydratase [Plautia stali symbiont] Length = 335 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M +VTG AGFIG + + L+ QV+ ID L Y +L L +I+ F+FL+ Sbjct: 1 MNFLVTGAAGFIGFHVSQRLLA-AGHQVVGIDNLNDYYDVSLKQARLDQITAHPAFTFLK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D DR+ I S ++ +++ A++ V SI + N+IG +LE R Sbjct: 60 MDQADRQAISSLFEQHAFARVIHLGAQAGVRYSIENPHAYADVNLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS D + P S Y+ATK +++ + + H Y Sbjct: 116 -----HHKIGHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + M+ G + +Y GQ RD+ Y++D +A+ Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGDAIDVYNRGQMTRDFTYIDDIAQAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + + + + L K+ Sbjct: 231 LQDVIPQTDENWTVENGSPATSSAPYRVYNIGNSQPTSLMTYIESLEKALGIEAKKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D+ + I + PQ ++E G+ + V WY D Sbjct: 288 -----MLPMQPGDVLGTSADTQPLYDAINFCPQTSVEKGVQRFVDWYRD 331 >gi|212212715|ref|YP_002303651.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] gi|212011125|gb|ACJ18506.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] Length = 331 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 43/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-LQVDIC 60 + +V GGAG IGS L+ + +V++ D N + + + + DI Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEF----ITTNIIGTFILLEETRLWWS 116 + + +ALK D + +FAA +L E+ TNI GTF +LE + Sbjct: 68 QTDILNTALKGV--DGVFHFAA-----LWLLQCYEYPRSAFQTNIQGTFNVLE------T 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C++Q K R + S+ VYG + +E P+N + Y ATK + + + A+ + YG Sbjct: 115 CVAQGVK---RLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHNRYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N YGP I +M++ G + LYGDG D++YVED A Sbjct: 172 LPFVGLRYMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAA 231 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIEDR 287 +K + E YN+G +++ EI + +P+ + F+++R Sbjct: 232 NICAMKADTVDEYYNVGTGKRTSILELAKEIQKITGTSDKIQFLPQGTT------FVKNR 285 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G ++ A +IG+ + + GL + + W Sbjct: 286 IGCPKKAA-------EQIGFKAEVGLTEGLQRLIEW 314 >gi|282895530|ref|ZP_06303667.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] gi|281199563|gb|EFA74426.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] Length = 316 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 152/346 (43%), Gaps = 36/346 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGGAGFIGS L L++D V+V+D NL+S E + F+ +D+ Sbjct: 1 MKAIVTGGAGFIGSHLVVRLIDD-GWDVIVVD------NLSSGHERNIPGGAHFIWMDLT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + S L + DAI + A+ + S + N + T LL+ W+ Sbjct: 54 TEDSF-SLLPDNGVDAIFHLASHVGQELSFENPTYDLKANALSTIFLLK-----WAL--- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF+ ST +YG SED P SPYS K +S+YL + +GI Sbjct: 105 -AKRVPRFIFASTMNIYGDPLNLPVSEDSEIKPPSPYSVGKVASEYLCKIY-QGFGIHTT 162 Query: 181 LSNCSNNYGPYH----FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YGP + ++ + ++ + + + + G RD++YV+D V A Sbjct: 163 CLRLFNVYGPLQDMKNMKQGMVSIFMSYVAKNVPIHVKGSKDRFRDFIYVDDVVDAFVKS 222 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L G+ YN+ + V+E I ++LDA K+ + I F + P Sbjct: 223 LDNRASGKIYNVSTGTKT----YVWELIDYILDAFGKKADEYP--ITFGDGTPKDQFGIY 276 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 D+S + ++ W P+ +++SGL W R L E+ P+ Sbjct: 277 GDNSSLVGDLDWVPRTDLKSGLKVMADWV-------RTLPSEMLPN 315 >gi|223939597|ref|ZP_03631472.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223891755|gb|EEF58241.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 313 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 38/336 (11%) Query: 1 MRLIVTGGAGFIGS----ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 M+++VTGGAGFIGS ALCR +V+V+D L+ +G ++L S+ +Q Sbjct: 1 MKVLVTGGAGFIGSHLAEALCRR-----GARVVVLDNLS-SGKTSNLDWKRSSDDLECIQ 54 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D ++ ++ + + + AA + V S+ E N+ GT LL R Sbjct: 55 GDVADELLVKDLIQGC--EWVFHEAAMTSVPISVAKPLETHQHNVDGTLRLLILAR---- 108 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RFL S+ +YG E MP P SPY+ K +++ + Y Sbjct: 109 -----AAGVKRFLFASSSSIYGDSPLTSKHESMPPAPLSPYALQKFAAEKYCQLFHQLYD 163 Query: 177 IPVLLSNCSNNYGP---YHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +P + N +GP + P +I T M++G +YGDG RD+ Y+E+ ++A Sbjct: 164 LPTVSLRYFNVFGPRQAFDSPYSGVIAKFCTSMLQGQPPTIYGDGLQSRDFTYIENVIQA 223 Query: 233 LYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLL-DALIPKSYSHTELIRFIEDRP 288 + IG+ +NI + + E+ L +L P RF R Sbjct: 224 NLAAAEAPSDKVIGKVFNIAAGQSISLLQLFRELNQLTGQSLKP---------RFEPARL 274 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D S K +G+ P+ N ++GL +T+ +Y Sbjct: 275 GDVKHSQADISAAKQALGYEPKVNWQAGLKRTLEFY 310 >gi|126696737|ref|YP_001091623.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9301] gi|126543780|gb|ABO18022.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9301] Length = 344 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 126/240 (52%), Gaps = 19/240 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL------NSLKEISQSNLFSF 54 +++TG AGFIGSAL L+ + V+ ID + Y+ + N +K + S ++F Sbjct: 8 ILITGAAGFIGSALAIKLLEENN-HVIGIDNINNYYSTSFKKERLSNIIKSPNSSKYWNF 66 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ I ++ I + ++++P +VN AA++ V S+ + +I +N++G F +LE Sbjct: 67 HKISIENKNQIFNIFEKYRPKIVVNLAAQAGVRYSLENPEAYIKSNLVGFFNILE----- 121 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 +C S D ++ F+ S+ VYG K F E D +P S Y+ATK S++ + ++ H Sbjct: 122 -ACKSFDVEN---FIYASSSSVYGGNKKVPFKENDSSNHPISLYAATKRSNELMAHSYSH 177 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP + YGP+ P+ + ++ + ++ G+ RD+ Y++D V ++ Sbjct: 178 LYDIPSIGLRFFTVYGPWGRPDMAPMIFANAIMNQLPINIFNFGKMKRDFTYIDDVVESI 237 >gi|21226761|ref|NP_632683.1| GDP-mannose 4,6 dehydratase [Methanosarcina mazei Go1] gi|20905053|gb|AAM30355.1| GDP-mannose 4,6 dehydratase [Methanosarcina mazei Go1] Length = 351 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 50/343 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G G+ L +L+N + V I + + + N + K+ + N+ F+ D Sbjct: 6 LITGITGQDGAYLAEFLLNKGYV-VHGIKRRSSSFNTARVDHLYKDPHERNVNFFMHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + ++ +GT LLE R+ L Sbjct: 65 LTDSTNLIRIIQEVQPDEIYNLAAQSHVQVSFETPEYTANSDGLGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK + Q ST E+YG + E P+ P SPY+A K + ++ + + YGI Sbjct: 121 GMEKKT--KLYQASTSELYGKVQDIPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIF 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I +A T++ G LY G+ RDW + +D+V A++ Sbjct: 179 ACNGILFNHESPIRGETFVTRKITMAATKIKHGLQEKLYLGNLDAKRDWGFAKDYVEAMW 238 Query: 235 LVLKKG-------RIGERYNIGGNNERKNIDIVFEI----------------GFLLDALI 271 L+L++ GE +++ E ++ E+ G +L + Sbjct: 239 LILQQEYPEDYVIATGETHSVREFTELAFKEVGIEVLWKGKGSDEVGIDSSTGKVLVEVD 298 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P+ Y TE+ I D SK K ++GW P+ +E Sbjct: 299 PRYYRPTEVDLLIG-----------DPSKAKEKLGWKPKVKLE 330 >gi|325522000|gb|EGD00687.1| UDP-glucose 4-epimerase [Burkholderia sp. TJI49] Length = 329 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAG+IGS C+ L + + D L+ G+ ++++ + DI Sbjct: 1 MKVFVTGGAGYIGSHTCKALAAAGH-EPIAYDNLS-TGHRDAVR------WGPLVVADIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + AL +PD +++FAA ++V S+L D + T N+ GT LL R Sbjct: 53 DGDALAGALAAHRPDVVIHFAALAYVGESVLVPDRYYTVNVTGTCTLLNAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-V 179 + R + S+ YG D SE P P +PY TK + + + + YG+ V Sbjct: 105 -EAGVGRIVMSSSCATYGIPDALPISERTPQQPINPYGFTKYAMERMAADFERAYGLKWV 163 Query: 180 LL-------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 L ++ G +H PE +PLAI + H F + G DG +RD++ Sbjct: 164 ALRYFNAAGADPDGEIGEHHEPETHALPLAIRAALGTGHAFQVMGIDYPTPDGSAIRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HVRA L +G N+G N ++ + + + +P + Sbjct: 224 HVSDLADAHVRAT-AYLNRGGNSVALNLGTGNGTSVLEAIRAVETVTGRRVPTVTA---- 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++K + +GW P+ +E + W+ Sbjct: 279 ----TRRPGDPPALYADATKAELVLGWQPRFTAIERMVEHAATWF 319 >gi|258541955|ref|YP_003187388.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-01] gi|256633033|dbj|BAH99008.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-01] gi|256636090|dbj|BAI02059.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-03] gi|256639145|dbj|BAI05107.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-07] gi|256642199|dbj|BAI08154.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-22] gi|256645254|dbj|BAI11202.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-26] gi|256648309|dbj|BAI14250.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-32] gi|256651362|dbj|BAI17296.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654353|dbj|BAI20280.1| UDP-galactose 4-epimerase [Acetobacter pasteurianus IFO 3283-12] Length = 328 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 145/335 (43%), Gaps = 59/335 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAG++GS + L++D V+V+D NL + + + +F+Q DI D Sbjct: 3 RFLVTGGAGYVGSHVVLALLDDGH-DVVVLD------NLRTGHRAAVPDQATFVQGDISD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 C+ L D I++FAA S V S+ ++T N F L++ +C+ Sbjct: 56 IACLDKVLSSGPWDGILHFAALSLVGESMQNPMMYMTANAGYGFGLID------ACVRHG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAWGHTYGIP 178 K RF+ ST ++GS +G +ED P NP SPY +K Y+V L W I Sbjct: 110 VK---RFVFSSTANLFGSAGEGPINEDAPINPGSPYGESK----YMVERALYWADK--IH 160 Query: 179 VLLSNC-----------SNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQN 219 L S C + G H PE LIPL I ++ L+G DG Sbjct: 161 GLKSACLRYFNAAGADPAGRAGEDHRPETHLIPLVIDAALKRRPALTLFGEDYPTPDGTC 220 Query: 220 VRDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +RD+++V D RA VL K + +N+G N +I+ +G + + +P Sbjct: 221 IRDYVHVTDLARAHLAVLPLLNDKSVV---FNVGTGRGNSNREIIDAVGRVSNLEVPWQA 277 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G +++ GW P+ Sbjct: 278 G--------PRRAGDPASLVASPARLMEATGWAPE 304 >gi|225175789|ref|ZP_03729782.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] gi|225168713|gb|EEG77514.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] Length = 307 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 29/322 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + + + V+V+D L+ L+ I+Q F ++D+ Sbjct: 1 MNVLVTGGAGFIGSHTVDLCIEN-GLNVVVVDDLSKG----RLEHINQQ--AKFYKLDVR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + + +++ + DA+++ AA+S V S++ + NI+GT +LE + Sbjct: 54 QTE-LTAVMEKEKIDAVIHLAAQSDVQTSLVNPGFDASVNILGTLNVLE---------AS 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG E P N S Y +K + + +G+ Sbjct: 104 IKTGVKKVVYASSAAVYGEPQFLPIDEKHPLNGQSGYGLSKQVPEKYLSLNKTIHGLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 +N YGP ++ + R+ G +YGDG+ RD++YV D +A +L L Sbjct: 164 ALRYANVYGPRQDAAGEGGVVAIFTDRLPRGEETIIYGDGEQTRDFVYVGDVAQANFLAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +KG G N+ + +++ ++ LI + T+ + + R G R + Sbjct: 224 QKGS-GRIMNV-STGQGTSVNELY-------GLITELLGTTKAPVYAQARAGDIRDSFLA 274 Query: 298 SSKIKSEIGWFPQENMESGLNK 319 ++ + E+GW P+ + GL + Sbjct: 275 NNSLGEELGWKPKTGLREGLRR 296 >gi|94265500|ref|ZP_01289249.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] gi|93453988|gb|EAT04332.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] Length = 334 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG+AL L+ + +V+ +D + Y L + L + F+ + Sbjct: 1 MKILITGSAGFIGNALALRLL-ERGDEVIGVDNVNAYYDPTLKESRLNRVRGCAGFTEER 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V + DR + ++ QP +VN AA++ V S+ ++ NI+G +LE R Sbjct: 60 VSLEDRPAMERVFRQHQPQRVVNLAAQAGVRYSLENPHSYVDANIVGFTNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 + F S+ VYG+ + +MP+ +P S Y+A+K + + + Sbjct: 116 ---HHGVEHLVF--ASSSSVYGA------NTEMPFSVHHNVDHPLSLYAASKKAGELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +PV YGP+ P+ + L +++ G + ++ G + RD+ Y++D Sbjct: 165 TYAHLYRLPVTGLRFFTVYGPWGRPDMALFLFTQKILAGEPIDVFNYGNHRRDFTYIDDI 224 Query: 230 VRALYLVLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + L G + YNIG + + ++++ I L + L Sbjct: 225 VEGVIRTLDHPAEPNPDWNGATPDPCTSTAPYRLYNIGAH---RPVELMHYIEVLEENLG 281 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ + + +PG D + +K+++G+ P +E G+ + V WYL+ Sbjct: 282 RKAEKN-----LLPLQPGDVPDTYADVADLKADVGYEPTTPVEEGVARFVEWYLE 331 >gi|302538232|ref|ZP_07290574.1| epimerase [Streptomyces sp. C] gi|302447127|gb|EFL18943.1| epimerase [Streptomyces sp. C] Length = 353 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/366 (25%), Positives = 149/366 (40%), Gaps = 73/366 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + L V V+D L A + + E+ + + ++ D+ Sbjct: 1 MRVLVTGGAGFIGSHVVAVLAAGGHTPV-VLDALLPAAHPRA-PELPDAEV---VRGDVR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + AL+ DA+ + AA + + A E++ N +GT +LL ET Sbjct: 56 DAEAVGRALRGV--DAVCHQAAMVGLGKDFADAPEYVACNDLGTAVLLAET--------- 104 Query: 121 DKKDQFRFLQISTDEVYG------------------------------------SLDKGL 144 + RF+Q + VYG L GL Sbjct: 105 ARAGVRRFVQAGSMVVYGEGRYECRGHGVVRPGPRAAADLEAGRFEPRCPRCGDGLVPGL 164 Query: 145 FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI-- 202 ED P +P + Y+ TK + ++L AW + G + N YGP P + Sbjct: 165 VDEDAPADPRNVYATTKLAQEHLAAAWARSTGGTAVSLRYHNVYGP-GMPRDTPYAGVAS 223 Query: 203 ---TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIG------ERYNIGGNNE 253 + + G ++ DG RD+++V D RA VL G G YN+G + Sbjct: 224 FFRSALARGEAPRVFEDGAQRRDFVHVRDVARANAAVL-AGVEGLPAGGHTAYNVGSGDP 282 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +G + AL + ++ E R G R DSS+++ E+GW P+ Sbjct: 283 HT-------VGEMAAALAAEHGGPAPVVTG-EFRLGDVRHITADSSRLRRELGWRPEVGF 334 Query: 314 ESGLNK 319 E G+ + Sbjct: 335 EQGMAE 340 >gi|218779540|ref|YP_002430858.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218760924|gb|ACL03390.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 306 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 40/328 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M+ +VTGG GFIGS + L + +V ++D L+ Y N+ ++ F++ D Sbjct: 1 MQYLVTGGCGFIGSHISEVLAEKGE-KVRILDDLSSGYEANIADF-----ADKVEFIKGD 54 Query: 59 ICDRECIRSALKEFQPDAIVNFA----AESHVDRSILGADEFITTNIIGTFILLEETRLW 114 I D E + A+K D + + A A V+R ++ D N+ GT +L R Sbjct: 55 IRDSEAVAKAMKGV--DGVFHLAGMVSAFDSVERPLVCHD----INVTGTLNILNAAR-- 106 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 R + S+ VYG+ + E M P+SPY+A+KA+S+ + + Sbjct: 107 -------DAGVKRVVFASSCAVYGNNPESPKVEAMTRAPASPYAASKAASELYMRVFAEL 159 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS---HVFLYGDGQNVRDWLYVEDHVR 231 YG+ + N +GP P I+R + + + +YGDG RD+++V D V+ Sbjct: 160 YGVQTVCLRFFNVFGPRQDPSSQYSGVISRFVNDTAEGYACIYGDGLQTRDFIFVRDVVQ 219 Query: 232 A--LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A L + K GE N+G E +D LLD + E++ F + R G Sbjct: 220 ANLLAMTSDKAGAGEPINVGTGVEISLLD-------LLDYMRELGDREFEVM-FKDARAG 271 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGL 317 R + SK + +G+ P + +GL Sbjct: 272 DVRHSRANISKAQELLGFEPAYTIRNGL 299 >gi|254286269|ref|ZP_04961228.1| nucleotide sugar epimerase [Vibrio cholerae AM-19226] gi|150423684|gb|EDN15626.1| nucleotide sugar epimerase [Vibrio cholerae AM-19226] Length = 335 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR++VTG AGFIGSA+ L V+ ID + ++ SLKE L F+F Sbjct: 1 MRILVTGAAGFIGSAVSAKLCQQGH-DVIGIDCINDYYDV-SLKEARLVKLLNEPKFTFR 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 +VD+ DRE + S E + D +++ AA++ V S+ + +N++G +LE R Sbjct: 59 KVDLADREGMASLFAEGKFDRVIHLAAQAGVRYSLENPFAYADSNLVGHLTILEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 Q+K + S+ VYG K FS D +P S Y+ATK S++ + ++ H Sbjct: 116 ----QNKVQHL--IYASSSSVYGLNAKVPFSTSDSVDHPVSLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YGP+ P+ + ++++G + + +G RD+ Y++D V + Sbjct: 170 YDIPTTGLRFFTVYGPWGRPDMAPFIFTKKILDGQTIDINNNGDMWRDFTYIDDIVEGVV 229 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG N +D + I L K++ Sbjct: 230 RIADVIPARNNEWTVENGTPASSSAPYSVYNIGYGNPINLMDFIKAIEDELGIEAKKNFR 289 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + G R +++ + + G+ P+ ++ G+ V WY Sbjct: 290 GMQ--------AGDVYRTYAETTDLFAATGYTPKVGVKEGVANLVKWY 329 >gi|77464088|ref|YP_353592.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] gi|77388506|gb|ABA79691.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] Length = 672 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 46/353 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L++D + +V+++D L AG ++L+ + + V R+ Sbjct: 320 VITGGAGFIGSNLADALLSDGE-EVILLDNLGRAGVEDNLRWLKARHGERLHPVIADLRD 378 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 A A+ + A ++ V S+ N GT LLE R Sbjct: 379 ERAMADAARDAAAVYHLAGQTAVTTSLESPVADFEINARGTLNLLEAIRA--------TG 430 Query: 124 DQFRFLQISTDEVYGSLD------------------KGLFSEDMPYNPSSPYSATKASSD 165 L ST++VYG+L+ E P + +PY +K +D Sbjct: 431 RPVPLLFASTNKVYGALEDLEMQPGERHVPADPEILAHGIGEGRPLDFCTPYGCSKGVAD 490 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRD 222 V+ + ++G+P + S YGP F + + + R ++G + ++GDG+ VRD Sbjct: 491 QYVIDYAKSFGLPTAVLRMSCIYGPRQFGTEDQGWVAHFLIRALKGEGISVFGDGRQVRD 550 Query: 223 WLYVEDHV---RALYLVLKKGRI-GERYNIGG--NNERKNIDIVFEIGFLLDALIPKSYS 276 L+V D V R L + GR+ + +N+GG N ++ EIG L + + Sbjct: 551 VLHVSDAVAAYRRLMAEVSAGRVRSQAFNLGGGPGNAVSLRQVLEEIGRLTGGPV----A 606 Query: 277 HTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 TE ED R G + D+ + + IGW P GL W ++ Sbjct: 607 VTE-----EDWRQGDQLWFVADTRALGAAIGWSPTVGWREGLAGLAAWLAEHR 654 >gi|269120996|ref|YP_003309173.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] gi|268614874|gb|ACZ09242.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] Length = 304 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 34/330 (10%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TGGAGFIGS + R+L+N+ +V+ D L GN+++ I+ N+ F +DI Sbjct: 3 KVLITGGAGFIGSHVADRFLLNNY--EVIAADNLV-TGNIDN---INGKNI-KFFNIDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + K +PD +++ AA+ V S+ NI +LE + Sbjct: 56 DREKLEELFKNEKPDYVIHLAAQVSVSSSVEDVLYDAEENITALINILELCK-------- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + + ST VYG ++ E P SPY +K + + + + +G+ + Sbjct: 108 -KYNTEKIVFSSTAAVYGIPEEVPSREANKTAPLSPYGLSKLTGEEYIKMYSRLFGVNYV 166 Query: 181 LSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP H ++ + ++ +F+ GDG RD++YV+D A Y+ Sbjct: 167 ILRYANVYGPRQSAHGEAGVVSIFNDKIKANGDIFIEGDGLQTRDFVYVKDVSGANYICA 226 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF-IEDRPGHDRRYAI 296 + E +N+ N + I L + + K YS E F E R G R + Sbjct: 227 TEDIKNETFNVSTNTD-------ISILKLFNTM--KKYSGYEKDAFHKEARKGDIRNSRL 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D++K+ W P+ ++ GL + YLD Sbjct: 278 DNNKLLKNTSWKPEYTLDQGLKE----YLD 303 >gi|134299745|ref|YP_001113241.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] gi|134052445|gb|ABO50416.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum reducens MI-1] Length = 311 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 38/330 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG +GFIG+ L L + +QV V+ K G L + E FLQ +I D Sbjct: 8 RVLVTGASGFIGTHLVSRLCKE-NMQVGVLRKSKLVGTLKNDHE-------EFLQANILD 59 Query: 62 RECIRSALKEFQPDAIVNFAA---ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +++ ++ FQP+ + + A H R +L A E N++GT LL Sbjct: 60 YDQMKAVVQYFQPEIVCHLAGLRPNGHSWRDVLQAYEI---NLLGTMNLLRSL------- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q Q L S E YG + E P+S Y KA++ L + + +P Sbjct: 110 -QGVNCQSVILVGSVAE-YGR-GPTPYREHQALYPTSAYGTAKAAATALGCLCYNYFKLP 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V+ + YGP + + I ++ F G+ RD+++V D V AL+L Sbjct: 167 VVTLRLALVYGPGQGEQFFLSQLIKSLLL-EQPFAMTGGEQYRDFIHVNDVVEALWLAAN 225 Query: 239 KGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---GHDRRY 294 R G NIG ++ + S TEL+R I +RP G Y Sbjct: 226 TPRARGGILNIGMGQSYPLKEVAMTVA--------TSLGRTELLR-IGERPYAQGEQFAY 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D+ + + W P+ ++E G+ T+ WY Sbjct: 277 CVDTQLARQVLNWQPKVSLEKGIMDTISWY 306 >gi|150402268|ref|YP_001329562.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C7] gi|150033298|gb|ABR65411.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C7] Length = 292 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/327 (28%), Positives = 149/327 (45%), Gaps = 44/327 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + V V+D L+ GN +L ++ F++ DI Sbjct: 1 MKILVTGGAGFIGSHIVDLLIENGH-DVSVLDNLS-TGNEKNLNSSAK-----FIKGDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + +++ AA+ +V S+ N++GT +LE+ + + Sbjct: 54 DKNLDLTGF-----ECVIHEAAQINVRTSVENPVFDANINVLGTINILEKIKEYGV---- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG + E NP SPY +K ++ + + YGI Sbjct: 105 -KKIIFSS---SGGAVYGEPEYLPVDEKHAVNPLSPYGLSKFCAEEYIKLYARLYGIEYC 160 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P +I + I +M +G +YGDG RD++ V+D +A + L Sbjct: 161 ILRYSNVYGSRQDPLGEAGVISIFIDKMKKGETPIIYGDGNQTRDFVNVKDVAKANLMAL 220 Query: 238 K-KGRIGERYNIGGNNERKNID----IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 K I NIG NE + I E GF D + K +R G Sbjct: 221 DWKNDI---VNIGYGNETSVNELFKIIASETGFNKDPIYEK------------EREGEVY 265 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNK 319 R ID SK K+ +GW P+ +E+G+ + Sbjct: 266 RIYIDYSKAKT-LGWIPEFELENGIKE 291 >gi|229118940|ref|ZP_04248287.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-3] gi|228664596|gb|EEL20091.1| UDP-glucose 4-epimerase [Bacillus cereus Rock1-3] Length = 338 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FKFYNES 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T IL C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 K + +F+ S+ VYG +E+ P + ++PY TK + ++ G Sbjct: 110 VMQKHNVKKFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADGEW 169 Query: 178 PVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 + L N +G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL+ I + YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLETTGI-DAYNLGTGKGYSVLEMVNAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKIIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCLDSWRWQVNN 331 >gi|218247354|ref|YP_002372725.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 8801] gi|218167832|gb|ACK66569.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 8801] Length = 362 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 25/325 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R ++TG G GS L +L+ +V I + T N + + I +Q+ LF Sbjct: 6 RALITGITGQDGSYLSEFLLEQ-GYEVHGIIRRTSTFNTDRIDHIYVDPHDTQAKLFLHY 64 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L++ QP I N A+SHV S + + + +GT LLE R + Sbjct: 65 G-DLTDGTTLRRILEQVQPVEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY- 122 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q + RF Q + E++G + E P+ P SPY+ K + + + + +Y Sbjct: 123 ---QQRTGIEVRFYQAGSSEMFGKVQDIPQKETTPFYPRSPYACAKVYAHWQTVNYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + N+ P F + I AI R++ G+ LY G+ + RDW Y +D+VR Sbjct: 180 DLFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNLDSKRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPG 289 A++L+L++ + Y I E +I EI F L + Y + F E RP Sbjct: 240 AMWLMLQQQE-ADDYVI-ATGETHSIREFLEISFNYVNLKWEDY-----VAFDERYLRPA 292 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 D +K K +GW P E Sbjct: 293 EVDLLIGDPTKAKENLGWEPSVTFE 317 >gi|220914294|ref|YP_002489603.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus A6] gi|219861172|gb|ACL41514.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus A6] Length = 334 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 148/328 (45%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +TGGAGFIGS L +L+ +V+V+D L+ G L +LK + F F++ I Sbjct: 1 MRTAITGGAGFIGSHLVEHLLA-AGDEVIVLDDLS-TGRLENLKGVIGHRRFRFIEGSIL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A+ D + + AA V+ + E + TNI GT ++L+ + L Sbjct: 59 DRATVDKAVA--GADRVFHLAAAVGVNLIVDHPLESLRTNIHGTEVVLDSVLEAGASL-- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHT 174 L ST E+YG SE+ S Y+A K + A+ Sbjct: 115 --------LLASTSEIYGKNTSDSLSEESDRILGSALKSRWTYAAAKGIDEAFAHAYWRQ 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ V + N GP ++P + + + G + +YGDG R + YV D V A Sbjct: 167 FGLRVAIVRLFNTVGPRQTGRYGMVVPRLVRQALAGEPLTVYGDGHQTRCFSYVGDIVPA 226 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIED 286 + + + R G YN+GGN+E + + I L+ + L+P +++E ED Sbjct: 227 ITRISEDERAYGNAYNLGGNHEISILALAERIVELVGSDSPITLVPYEQAYSE---GYED 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RR D++K +G+ P+ ++ Sbjct: 284 M----RRRVPDNTKAFGLVGFDPKTTVD 307 >gi|121613306|ref|YP_001001082.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005980|ref|ZP_02271738.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 81-176] gi|56797604|emb|CAI38878.1| putative GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 81-176] gi|62865922|gb|AAY17131.1| putative nucleotidyl sugar transferase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249961|gb|EAQ72920.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni 81-176] Length = 344 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 37/325 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ + D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKEGYD 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 126 PVVHI----CSSSEVYGKAKVGVKLNEETAFHGASPYSISKIGTDYLGKFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L+ +KG I GE +NI G F++ ++D L+ + +++ R IE R Sbjct: 241 LLSLESEKGNIPCGEAFNIAGEE-------AFKLPEVIDILL----NFSDMGRGIEVRQV 289 Query: 290 HDRRYAIDS-------SKIKSEIGW 307 DR ID+ SKIKS I W Sbjct: 290 EDRMRPIDADYQMFDNSKIKSFIDW 314 >gi|299131836|ref|ZP_07025031.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] gi|298591973|gb|EFI52173.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] Length = 338 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 43/346 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIG + + L+ +V+ +D + + SLKE + L FSF ++ Sbjct: 6 ILVTGAAGFIGFHVSQRLLQGGH-RVVGLDSINDYYD-PSLKEARLAILRNDSNFSFEKI 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR RS + + +++ AA++ V SI +I N+ G +LE R C Sbjct: 64 DLADRAATRSIFERHRFPVVIHLAAQAGVRYSIDHPTVYIDANLQGFANVLEGCR-HNGC 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L S+ VYG+ K FS D +P S Y+A+K +++ + ++ H YG Sbjct: 123 E--------HLLFASSSSVYGANTKLPFSVHDNVDHPISLYAASKKANELMAHSYSHLYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + L + EG + L+ +G +RD+ Y++D A+ + Sbjct: 175 LPTTGLRFFTVYGPWGRPDMAMFLFAKAITEGKPIRLFNNGDMMRDFTYIDDVTEAVVRL 234 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ YNIG N K +D+V + K + T Sbjct: 235 AQRPATPNASWDAQHPDPASSRAPWRIYNIGNNQPEKLMDLV--------QALEKEFGRT 286 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G D ++ E+ + P + G+ + V WY Sbjct: 287 ARKELLPMQAGDVYATYADIDDLQREVDFHPSTPLADGVARFVAWY 332 >gi|255021511|ref|ZP_05293555.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC 51756] gi|254969039|gb|EET26557.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC 51756] Length = 336 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 15/237 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQV 57 RL+VTG AGFIG LCR L+ + V ID L A L ++ F+F + Sbjct: 5 RLLVTGAAGFIGFHLCRRLLAE-GWTVRGIDNLNDYYDPALKRARLSQLEGHPAFTFQHL 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI R+ + + D +VN AA++ V S+ + +N++G LLE R Sbjct: 64 DIAQRDDLHRLFTGSRFDVVVNLAAQAGVRYSLEHPHSYADSNLLGFVNLLEGCR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 D F S+ VYG+ + +SE P + P S Y+ATK + + + ++ H Y Sbjct: 119 --HQGVDHLLF--ASSSSVYGANSRLPYSEHDPVDHPVSLYAATKRAGELMAHSYAHLYD 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 IPV YGP+ P+ +++ G + ++ GQ RD+ Y++D V A+ Sbjct: 175 IPVTGLRFFTVYGPWGRPDMAYFSFTRKILAGESIPVFNHGQMQRDFTYIDDIVEAV 231 >gi|56708500|ref|YP_170396.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670971|ref|YP_667528.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis FSC198] gi|224457664|ref|ZP_03666137.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|45434707|gb|AAS60269.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis] gi|56604992|emb|CAG46092.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321304|emb|CAL09475.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis FSC198] gi|282159710|gb|ADA79101.1| NAD dependent epimerase [Francisella tularensis subsp. tularensis NE061598] Length = 323 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 14 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ G +LE R + Sbjct: 72 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 121 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 181 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 240 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 241 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 293 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 323 >gi|289549040|ref|YP_003474028.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484] gi|289182657|gb|ADC89901.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484] Length = 322 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 33/334 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R+++TG AGF+GS LC + + +V+ ID G ++ + F F+ + Sbjct: 8 VRVVITGAAGFLGSHLCDRFLKE-GFEVIGIDNFL-TGRPENIAHLFGHPRFKFIHYSVT 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D +++FA + + + + +GT + L Sbjct: 66 NYIYIDGPV-----DLVLHFACPASPVDYMRHPIHTMKVDSLGTI----------NTLGL 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K + R++ ST E+YG E P P S Y K S+ L +A+ + Sbjct: 111 AKLKKARYILASTSEIYGHAHVHPQPETYWGYVNPIGPRSVYYEAKRFSEALCMAYHREH 170 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI V ++ N YG ++IP +T+ + + ++GDG R + YVED V + Sbjct: 171 GIDVRIARIFNTYGERMRLNDGRVIPTFLTKALRNEPIPIHGDGSQTRSFCYVEDMVEGI 230 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 Y L +G GE +N+G E I L D ++ K + + F+ R Sbjct: 231 YRLATYEGLQGEVFNLGNPQE-------VSIKDLADNIL-KITKSSSTVMFLPPREEDPP 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D +K K + W P+ ++ GL +TV W D Sbjct: 283 RRCPDITKAKKLLHWEPKVDLLEGLARTVRWMRD 316 >gi|119469099|ref|ZP_01612083.1| capsular polysaccharide biosynthesis protein [Alteromonadales bacterium TW-7] gi|119447351|gb|EAW28619.1| capsular polysaccharide biosynthesis protein [Alteromonadales bacterium TW-7] Length = 334 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 29/341 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+A C+ L+ + V+ ID L Y NL L + F+F++ Sbjct: 1 MKYLVTGAAGFIGAATCQKLLAAGHV-VIGIDNLNDYYDVNLKLARLAQFENHENFTFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI +R + Q D +++ AA++ V SI D + +N++G +LE Sbjct: 60 LDISERAVMSELFVAQQFDKVIHLAAQAGVRYSIENPDAYADSNLVGHLNVLE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + K + S+ VYG +K F + D +P S Y+ATK +++ + ++ H Y Sbjct: 114 CRHNNVK---HLVYASSSSVYGLNEKTPFETTDSVDHPVSFYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++++G + + +G RD+ Y++D V + Sbjct: 171 SLPTTGLRFFTVYGPWGRPDMAPYIFTKKILDGDTIDINNNGDMWRDFTYIDDIVEGVLR 230 Query: 236 ---VLKKGRIGERYNIGGNNERKNIDIVFEIGF--------LLDALIPKSYSHTELIR-F 283 V+ R G V+ IG ++A+ + TE + F Sbjct: 231 AADVIPTANPDWRVESGSPATSSAPYAVYNIGHGSPINLMKFIEAI--EGELGTEASKNF 288 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E + G + D+ ++ + G+ Q +E G+++ + WY Sbjct: 289 REMQAGDVYKTYADTQELFNATGYKAQVGVERGVSELIKWY 329 >gi|315651746|ref|ZP_07904751.1| UDP-glucose 4-epimerase [Eubacterium saburreum DSM 3986] gi|315486001|gb|EFU76378.1| UDP-glucose 4-epimerase [Eubacterium saburreum DSM 3986] Length = 355 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 103/357 (28%), Positives = 161/357 (45%), Gaps = 54/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +V+V+D L + +L ++EI+ +L F +VD Sbjct: 1 MSILVTGGAGYIGSHTCVELLN-AGYEVVVVDNLVNSSRESLKRVEEITGKSL-RFYEVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +R+ + KE + DA+++FA V S+ E+ NI GT IL E R Sbjct: 59 LLNRKALTKVFKENKIDAVIHFAGLKAVGESVYKPLEYYHNNITGTLILCEVMR------ 112 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGHT 174 +F +I S+ VYG +ED P ++PY TK + +L HT Sbjct: 113 ------EFSVEKIVFSSSATVYGDPKVVPITEDAPMGVITNPYGRTKGMLEQ-ILTDIHT 165 Query: 175 Y--GIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGSHVFL--YG----- 215 V+L N G P P L+P IT++ G V L +G Sbjct: 166 ANNNFSVMLLRYFNPIGAHESGRIGENPKGIPNNLLPY-ITQVAVGKLVCLGVFGNDYDT 224 Query: 216 -DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 DG VRD+++V D HV+AL ++K + YN+G +D++ + D Sbjct: 225 KDGTCVRDYIHVVDLAKGHVKALEKMIKSPGKVDIYNLGTGIGYSVLDVINAFEKVNDLK 284 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 I +Y F R G D ++ +E+GW Q+N+E + W +N Sbjct: 285 I--NYV------FKARRAGDVPACYADPTRAFNELGWKAQKNIEDMCRDSFRWQKNN 333 >gi|304393747|ref|ZP_07375675.1| protein CapI [Ahrensia sp. R2A130] gi|303294754|gb|EFL89126.1| protein CapI [Ahrensia sp. R2A130] Length = 340 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 151/351 (43%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAG----NLNSLKEISQ--SNLF 52 M +VTG AGFIG R L+ + + V +++ G L L E+S + + Sbjct: 1 MDYLVTGNAGFIGYHTTRKLLERGNSVVGVDMVNDYYDVGIKEARLKQLDEVSAKTGSNY 60 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 +++ DR + + KE +P ++N AA++ V S+ ++ +NIIG LLE Sbjct: 61 HHARINFADRAALEAVFKEHKPRKVINLAAQAGVRYSLENPHAYVESNIIGFTNLLE--- 117 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 C + + + ST VYG+ FSE N P Y+ATK +++ + ++ Sbjct: 118 ----CCRYGEVEHLAY--ASTSSVYGANTNMPFSEHHGVNHPIQFYAATKRANELMAHSY 171 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H + +P YGP+ P+ + L +++ G + ++ +G + RD+ YV D Sbjct: 172 SHLFRMPTTGLRFFTVYGPWGRPDMALFLFTRKILAGEPIPVFNNGNHTRDFTYVSDIAE 231 Query: 232 ALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + + +NIG N K ++ IG L DAL K Sbjct: 232 GVVRITDNPAAPNPDWDAANPDPATSNAPFRIFNIGNNTPVK---LMTYIGALQDALGKK 288 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + I F+ + G D S++ + + + P +E+G+ V WY Sbjct: 289 A-----EIDFLPLQDGDVPDTYADVSELMAAVDYKPATPVETGVANFVDWY 334 >gi|269793019|ref|YP_003317923.1| UDP-glucose 4-epimerase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100654|gb|ACZ19641.1| UDP-glucose 4-epimerase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 339 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/363 (25%), Positives = 159/363 (43%), Gaps = 62/363 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 MR++VTGGAG+IGS C L+++ Q++V+D L + L ++ I+ +L F + D Sbjct: 1 MRILVTGGAGYIGSHCCVELLSE-GYQLVVVDSLVNSKPEALRRIRRITGRDL-EFYRGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + E + DA+++FA V S+ ++ N+ GT L C Sbjct: 59 VGDRELLERVFSENRIDAVIHFAGLKAVGESVQVPLKYYRNNVCGTVAL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK----------ASSD--- 165 + ++ R + S+ VYG ++ SED P SPY TK ASS+ Sbjct: 110 AMERHQIKRMVFSSSATVYGEPERCPISEDFPLEAKSPYGRTKLMIEQILGDLASSNRDF 169 Query: 166 -YLVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG----- 215 ++L + + G ++ S G P P L+P IT++ G + ++G Sbjct: 170 SLVILRYFNPIG-----AHESGLMGEDPNGIPNNLMPY-ITQVASGRLETLNVFGGDYDT 223 Query: 216 -DGQNVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALI 271 DG +RD+++V D V+ L K YN+G ++++ I Sbjct: 224 PDGTPIRDYIHVVDLVKGHLKALDKATSSAGTFVYNLGTGRGYSVLEVIRAFEAATGVRI 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 P R ++ RPG D SK E+GW + +E +C ++W W Sbjct: 284 P--------YRIVDRRPGDVPVCYADPSKALRELGWRAERTLED-----MCR---DSWRW 327 Query: 332 RPL 334 + + Sbjct: 328 QTM 330 >gi|154248844|ref|YP_001409669.1| NAD-dependent epimerase/dehydratase [Fervidobacterium nodosum Rt17-B1] gi|154152780|gb|ABS60012.1| NAD-dependent epimerase/dehydratase [Fervidobacterium nodosum Rt17-B1] Length = 311 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 30/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS L LV +L V+VID NL++ K + + F+++DI D Sbjct: 3 KVLVTGGAGFIGSHLTDKLV-ELGHDVVVID------NLSTGKRENVNPKAKFVEMDIYD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + + + AA++ V S+ + NIIG+ L++ + ++ Sbjct: 56 GQKVNELFANEKFEYVFHLAAQASVAISVKDPVKDANWNIIGSINLIKAS-------IEN 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++F F + +YG D +F E + P SPY K S + + + +G+ Sbjct: 109 GVNKFIFSS-TGGAIYGE-DVKVFPTPESVFPQPMSPYGIAKFSVENYLRFFSKEFGLKY 166 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P ++ + +RM++ ++GDG+ RD++YVED V A Sbjct: 167 TVLRYGNVYGPRQDPYGKAGVVAIFTSRMLKNEDCTIFGDGEYTRDYVYVEDVVDANIKA 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++KG G NIG + L L+ K + + + R G R+ + Sbjct: 227 MEKGD-GLVINIGTATGTTTNE--------LFKLLKKLTGYKKDPVYGPHRKGDIRKSLL 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ E+ W P+ ++E GL KTV W+ N Sbjct: 278 CYNRAWIELKWEPKHSLEEGLRKTVEWFKRN 308 >gi|94970831|ref|YP_592879.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] gi|94552881|gb|ABF42805.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] Length = 314 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 40/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGF+GS LC L+ + V V + +T G+ +L+ +++ + F F++ DIC Sbjct: 1 MRIVVTGAAGFLGSHLCDALLAEGHDVVGVDNFVT--GSAGNLEHMARDSRFGFVEHDIC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D + FA+ + I E + +G F +CL Sbjct: 59 EPFDVGAF------DFLFQFASPASPIDYIEHGVETLKVGSVGNF----------NCLEY 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 ++ FL ST E YG + E P P S Y K ++ +A+ + Sbjct: 103 ARRYNAGFLLASTSECYGDPLEHPQRETYWGNVNPIGPRSVYDEAKRFAEASTMAFFRYH 162 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP ++I + + + G + +YGDG+ R + YV D V Sbjct: 163 GVNTRIVRIFNTYGPRLQVNDGRVISNLMKQALLGEDMTIYGDGKQTRSFCYVADEVEG- 221 Query: 234 YLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 +L+ R E + NIG E + E L+ + S S IRF E P D Sbjct: 222 --ILRLSRTEEHFPTNIGNPKEF----TILECAELVKEVTGSSSS----IRF-EPMPQDD 270 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ D SK KS +GW P+ ++E GL ++ ++ D Sbjct: 271 PKQRKPDISKAKSLLGWEPRVSLEEGLRMSLPYFSD 306 >gi|188533720|ref|YP_001907517.1| UDP-sugar epimerase [Erwinia tasmaniensis Et1/99] gi|188028762|emb|CAO96624.1| UDP-sugar epimerase [Erwinia tasmaniensis Et1/99] Length = 335 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + + L+ D QV+ +D L Y NL + L I+ + F+F++ Sbjct: 1 MKYLVTGAAGFIGFHVIQRLL-DAGHQVVGLDNLNDYYDVNLKTSRLALIADRSGFTFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ +RE + + + +++ ++ V S+ + N++G +LE R Sbjct: 60 DDLANREGMAELFRSHRFQRVIHLGGQAGVRYSLENPLSYADANLVGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L S+ VYG K FS +D +P S Y+ATK +++ + ++ H Y Sbjct: 116 -----HNQVEHLLYASSSSVYGLNRKMPFSTDDAVDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + M+ G + +Y GQ RD+ Y++D V ++ Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTRAMMAGEKIDVYNHGQMRRDFTYIDDIVESIIR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++KG YNIG ++ + ++ I L AL K+ + Sbjct: 231 LQDVIPQPDADWTVEKGSPAASSAPYRVYNIGNSHP---VTLMAYIEALEGALGMKADKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G + D+ + IG+ PQ ++E G+ + V WY Sbjct: 288 -----MLPMQSGDVAETSADTRALFEVIGFRPQTSVEEGVARFVDWY 329 >gi|241763229|ref|ZP_04761287.1| NAD-dependent epimerase/dehydratase [Acidovorax delafieldii 2AN] gi|241367619|gb|EER61896.1| NAD-dependent epimerase/dehydratase [Acidovorax delafieldii 2AN] Length = 333 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 31/337 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVD 58 +++TG AGFIGS + L+ + +VL +D + Y L L+ I + F F+++D Sbjct: 10 VLLTGAAGFIGSHVAARLL-ERGDRVLGLDNVNDYYDPALKWARLRRIEGAPGFRFVRLD 68 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + + D +++ AA++ V SI ++ +N+ G +LE C Sbjct: 69 LHDRARMAELFATERFDGVIHLAAQAGVRYSITHPHAYLDSNLTGFGHVLE------GCR 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +Q + S+ VYG K F+E D P S Y+ATK +++ + + H YG Sbjct: 123 AQGVA---HLVYASSSSVYGGNTKMPFTETDAVDRPVSLYAATKKANELMAHTYSHLYGF 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ L ++ G + ++ G RD+ Y++D + VL Sbjct: 180 PTTGLRFFTVYGPWGRPDMAYHLFTRAILAGEPIPVFNHGDMRRDFTYIDDITEGVLRVL 239 Query: 238 KKGRIGER--------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + E +NIG + + +D + I + + + + +PG Sbjct: 240 DRPATPEHVGTAPYRVFNIGNSEPVQLLDFI--------NCIESALGKKAIKQLLPMQPG 291 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +G+ P + GL K V WY D Sbjct: 292 DVPATYASTQSLRDWVGFAPSTPLVEGLRKFVHWYRD 328 >gi|326486487|gb|ADZ76313.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 343 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRIGIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFNIPIETLQTNIIGTANILENIRI---LKAKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG + +ED ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPIVHI-CSSSEVYGRAKAEVKLNEDTAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG++ GE +NI G VF++ ++D L+ +S + I+ +D Sbjct: 241 LLSLESEKGKVPCGEAFNIAGEE-------VFKLPEVIDILL--GFSTRKDIKVEQDEER 291 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 292 LRPIDADYQMFDNTKIKSFIDWKPE 316 >gi|254469201|ref|ZP_05082606.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. JE062] gi|211961036|gb|EEA96231.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. JE062] Length = 336 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 156/352 (44%), Gaps = 49/352 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++VTG AGFIG+A+ L+ D V+ +D +T Y L LK ++ SN F+ ++ Sbjct: 3 KVLVTGTAGFIGNAVALRLLQD-GYHVIGLDCVTDYYDVTLKEERLKRLTSSNHFTEERI 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D E + K+ P +++ AA++ V S+ ++ N+ G +LE R Sbjct: 62 RLEDAEAVMRIFKQHAPSKVIHLAAQAGVRYSLESPQSYVDANVTGFLSILEGAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLA 170 + K + ST VYG E MP +P S Y+ATK +++ + + Sbjct: 117 -AHSVK---HLVYASTSSVYG------LDETMPLSTHRGGNHPVSFYAATKKANEAMAHS 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H + IP YGP+ P+ + ++EG V L+ G +RD+ YV+D V Sbjct: 167 YAHLFDIPCTGLRFFTVYGPWGRPDMALFKFTKAILEGEPVPLFNHGNMIRDFTYVDDIV 226 Query: 231 RALYLVLKKGRIGERYNIGGNN-ERKNIDI--------VFEIG-----FLLD--ALIPKS 274 + RI + ++ + KN D VF IG L+D A I ++ Sbjct: 227 EGIV------RIADLPPQRSDDWDGKNADPATSSAPYQVFNIGNSDPVQLMDYLAAIEEA 280 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F+ + G D + + G+ PQ ++++G+ V WY D Sbjct: 281 LGMEAKKEFLPFQAGDVAATFADVTDLIETTGFKPQTSVKAGVANFVKWYRD 332 >gi|86607290|ref|YP_476053.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] gi|86555832|gb|ABD00790.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] Length = 336 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/364 (23%), Positives = 156/364 (42%), Gaps = 57/364 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MRL+VTGGAG+IGS C+ L + + D L Y G+ +++ + L++ DI Sbjct: 1 MRLLVTGGAGYIGSHTCKALAAHGHLPI-AYDNLVY-GHPWAVR-------WGPLEIGDI 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + +++++P+ +++FAA ++V S+ ++ N+ G+ LLE R Sbjct: 52 ADRQRLDQVIRQYRPEGVIHFAAYAYVGESVKDPGKYYRNNVAGSLTLLEAMR------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + ST YG ++ E P P +PY +K + ++ + +GI Sbjct: 105 -DHGIPYLVFS-STCATYGVPEQIPIPETHPQRPINPYGQSKLVVEQMLRDFQTAHGIRF 162 Query: 180 LL--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 + ++ G H PE LIPL + + H+ ++G DG +RD+ Sbjct: 163 ISLRYFNAAGADPDGEIGEAHDPETHLIPLVLEVAAGQRPHITVFGDDYDTLDGTCIRDY 222 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D HV AL + + YN+G +++ + IP Sbjct: 223 IHVADLAQAHVLALEALASGQPVQAAYNLGNGQGFSVQEVIATAAAVTGRQIP------- 275 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW---RPLYK 336 ++ RPG D++ I+ ++ W P+ + L W W RP + Sbjct: 276 -VQVGARRPGDPPCLVGDATAIQRDLNWQPR-------YADLAEILQTAWRWHQRRPYFA 327 Query: 337 ELKP 340 + P Sbjct: 328 KATP 331 >gi|258517372|ref|YP_003193594.1| UDP-glucose 4-epimerase [Desulfotomaculum acetoxidans DSM 771] gi|257781077|gb|ACV64971.1| UDP-glucose 4-epimerase [Desulfotomaculum acetoxidans DSM 771] Length = 324 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 156/333 (46%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + R L +VLV+D L G+L+++ + F++ DI Sbjct: 1 MNILVCGGAGYIGSHVVRQL-QKKGYEVLVLDNLI-NGHLSAVDGVP------FVKADIT 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ ++ DA+++FAA S V S+ + N++GT LLE R + Sbjct: 53 DKQALQEVFSRNSIDAVMHFAAFSIVGESMSKPGLYYRNNVLGTLNLLEAMR-------E 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K + F ST VYG ++ E+ P++PY ATK + + ++ + H YG+ + Sbjct: 106 NKVSKLIF--SSTAAVYGEPEEIPICEEHRTKPTNPYGATKLAVEEMLNWFNHAYGLNYV 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S + G H PE LIPL + T + + ++G DG +RD++ Sbjct: 164 SLRYFNAAGADESGDIGEDHNPETHLIPLVLKTALGVLPEIKIFGTDYPTPDGTCLRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +V D H+ L L G +N+G N GF + +I + T + Sbjct: 224 HVNDLADAHIMGLQ-SLSGGGQSTIFNLGNGN-----------GFSVKEIIETARKVTGK 271 Query: 280 LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 I+ +E R G S KIK E+GW P+ Sbjct: 272 PIQAVETDRRTGDPAVLVASSEKIKQELGWQPR 304 >gi|322368741|ref|ZP_08043308.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] gi|320551472|gb|EFW93119.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] Length = 315 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 34/323 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGF+GS L L D +++L GN+ + + ++ D+ D Sbjct: 18 ILITGGAGFVGSHLAESLARDNDVRILDDFSTGKRGNVPADA--------TLIEGDVRDP 69 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEETRLWWSCLSQ 120 E + A+ + D + + AA V RS+ +T N G+ ++L+ R Sbjct: 70 EAVAEAMADV--DIVFHEAAMVSVSRSVEHPLRSHAVTGN--GSLVVLDRAR-------- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ R + S+ VYG D E P+SPY K ++D + YGI + Sbjct: 118 --REDARVVLASSAAVYGHPDAVPVVESEHKRPTSPYGIDKLTADQYARRFSDLYGIETV 175 Query: 181 LSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YGP PE ++ + + G + + GDG RD+++V+D V+A Sbjct: 176 TLRYFNVYGPRQNPEYSAVVRTFLDQARRGEDITIQGDGTQTRDFVHVDDVVQANCRAAT 235 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 R GE +N+G I L + + + S ++++ + RPG D Sbjct: 236 TDRTGEAFNVGTGES-------VTIRELAETIRSVTDSSSDIV-HTDPRPGDIDHSRADI 287 Query: 299 SKIKSEIGWFPQENMESGLNKTV 321 +K ++ +G+ P ++ GL + V Sbjct: 288 TKARTALGYEPTVSLSDGLAELV 310 >gi|227821412|ref|YP_002825382.1| UDP-glucuronate 5'-epimerase [Sinorhizobium fredii NGR234] gi|227340411|gb|ACP24629.1| UDP-glucuronate 5'-epimerase [Sinorhizobium fredii NGR234] Length = 341 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 31/350 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQ 56 MR ++TG AGFIG + + L++D V+ D +T Y L + + +SN F + Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDDGHF-VVGFDGMTPYYDVTLKQRRHAILERSNGFKAVT 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + A + +P+ I++ AA++ V S+ ++ N++G++ +LE R Sbjct: 60 AMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLLGSWNILELARAIGP 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + ST +YG+ +K F+E D P + Y+ATK S + + ++ H Y Sbjct: 120 K---------HLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + ++ G + +YG+G+ RD+ Y++D V + L Sbjct: 171 KVPTTAFRFFTVYGPWGRPDMALFKFVDAILNGRPIDIYGEGRMSRDFTYIDDLVEGI-L 229 Query: 236 VLKKGRIGERYNIGGNNERKNID--IVFEI-----GFLLDAL-----IPKSYSHTELIRF 283 L E +G + + + F + G +D + + K+ + Sbjct: 230 RLSHVAPSEANRVGPDLAQDTLSGHAPFRVVNVGGGQPVDLMTFVDTVEKAVGRPAVRNM 289 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + + G R +++ G+ P +E G+ + V WY ++RP Sbjct: 290 LPMQMGDVPRTYASPDLLEALTGFKPMMPVEEGVARFVEWY---EQYYRP 336 >gi|94970640|ref|YP_592688.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] gi|94552690|gb|ABF42614.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] Length = 332 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 35/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGGAGFIGS L L++ +V +ID L+ G + +++ + S LF + +D Sbjct: 1 MKALITGGAGFIGSHLAEKLLSRGD-EVHIIDDLS-TGTIANIQHLKSSPLFHY-HIDTI 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L + D + AA V + + TNI GT I+L L++ Sbjct: 58 TNQRLMTELVDLC-DITYHLAAAVGVRLIVESPVRTMETNIRGTEIVL--------ALAE 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHT 174 K+ R L ST EVYG + F E D+ P+S Y+ +KA ++L +A+ Sbjct: 109 RKRK--RVLITSTSEVYGKREHIPFREDDDLIMGPTSKGRWSYACSKAIDEFLAIAYWKE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +P ++ N GP +IP +T+ + G + ++GDG R + +V D V + Sbjct: 167 KKVPTVIVRLFNTVGPRQTGRYGMVIPNLVTQALTGEDMTVFGDGLQARCFTHVSDSVNS 226 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIED 286 + + GE YNIG E +D+ I L D+ +P ++ E ED Sbjct: 227 IVQIAAHPNANGEVYNIGTQEEITILDLARRIKLLTDSDSKIVFVPYEKAYEE---GFED 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R D +K IG+ P+ ++ L + Sbjct: 284 M----MRRVPDLTKAHKLIGYRPRVALDETLRSII 314 >gi|15843246|ref|NP_338283.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|253800672|ref|YP_003033673.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 1435] gi|254233132|ref|ZP_04926458.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis C] gi|254366186|ref|ZP_04982230.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis str. Haarlem] gi|13883602|gb|AAK48097.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|124602925|gb|EAY61200.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis C] gi|134151698|gb|EBA43743.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis str. Haarlem] gi|253322176|gb|ACT26779.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 1435] Length = 322 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 151/328 (46%), Gaps = 24/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +VTG AGFIGS L L+ D V+ +D G +L+ ++ ++ F++ DI Sbjct: 9 VRALVTGAAGFIGSTLVDRLLADGH-SVVGLDNFA-TGRATNLEHLADNSAHVFVEADIV 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L++ +P+ + + AA+ V RS+ N+IGT L E R Sbjct: 67 TAD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAAR-------- 117 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + S+ +YG+ + E P +P+SPY+A K + + + + H YG+ Sbjct: 118 -QTGVRKIVHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDC 176 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A V Sbjct: 177 SHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRV 236 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G R+NIG E + L + + + + F R G +R + Sbjct: 237 SADVGGGLRFNIGTGKETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRSCL 288 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + +GW PQ + G+ +TV ++ Sbjct: 289 DIGLAERVLGWRPQIELADGVRRTVEYF 316 >gi|323342610|ref|ZP_08082842.1| UDP-glucose 4-epimerase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463722|gb|EFY08916.1| UDP-glucose 4-epimerase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 337 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 90/362 (24%), Positives = 161/362 (44%), Gaps = 64/362 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGGAG+IGS C L+N +V+V+D L+ + ++ +LK + +F + + Sbjct: 1 MKVLVTGGAGYIGSHTCVELLNQ-GFEVVVVDNLSNS-SVEALKRVEAITGKTVTFYETN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ + + ++ DA+++FAA V S+ E+ NI GT L E R Sbjct: 59 VLDKPSLNAIFEKESVDAVIHFAALKAVGESVSKPLEYYQNNITGTLTLCEVMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD------------- 165 D + S+ VYG+ +E P + +SPY +TK ++ Sbjct: 113 ---DNDVKNIIFSSSATVYGAPKTVPINESFPLSTTSPYGSTKLMAEDMLRDLNIADPSW 169 Query: 166 -YLVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG----- 215 ++L + + G ++ S G P P L+P IT++ G H+ ++G Sbjct: 170 NVVILRYFNPIG-----AHESGTIGEDPKGIPNNLVPY-ITQVAVGKLDHLSVFGDDYDT 223 Query: 216 -DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 DG VRD+++V D HV AL + + YN+G +++V ++ Sbjct: 224 VDGSGVRDYIHVVDIALGHVAALKKMTETPEY-RVYNLGTGQGYSVLEMVKAFSDVVGHE 282 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 IP + E RPG D K + E+GW + ++ +C +++W Sbjct: 283 IP--------YQIKERRPGDIAECYADPQKAREELGWEAKRDLHK-----MC---EDSWN 326 Query: 331 WR 332 W+ Sbjct: 327 WQ 328 >gi|307543595|ref|YP_003896074.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581] gi|307215619|emb|CBV40889.1| NAD-dependent epimerase/dehydratase [Halomonas elongata DSM 2581] Length = 333 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 41/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+L++TG AGFIG A+ + L + +L +D L+ Y +L L +++ + F + Sbjct: 1 MKLLITGMAGFIGHAVAKRLAGQ-EYDILGVDNLSDYYDVSLKQARLDDLADAPNIRFER 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + + D +++ AA+ V S+ + N++G +LE R Sbjct: 60 LDLADREAVAALFEAEGFDRVIHLAAQPGVRYSLENPHAYADANLLGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + S+ VYG+ DK F + D +P S Y+ATK +++ + + H Y Sbjct: 116 ---HGRVEHLVY--ASSSSVYGANDKTPFATSDNVDHPISLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVR 231 +P YGP+ P+ + ++ G + +Y G+ RD+ Y++D VR Sbjct: 171 DLPTTGLRFFTVYGPWGRPDMAMFKFTRAVLAGEPLQVYNHGEMFRDFTYIDDIVEGIVR 230 Query: 232 ALYLVLKKGRIG------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 L +V K+ YNIG + +D V + +S + E Sbjct: 231 ILDVVPKRDEKTVPASPDTSDAPYRLYNIGHGSPVALMDFVRAV---------ESATGRE 281 Query: 280 LI-RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I F +PG R D+ + + G PQ +E G+ + V WY D Sbjct: 282 AICDFQPMQPGDVPRTWADTEALFAATGHRPQIGVEEGVARFVEWYRD 329 >gi|254371126|ref|ZP_04987128.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC033] gi|254875348|ref|ZP_05248058.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|151569366|gb|EDN35020.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC033] gi|254841347|gb|EET19783.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis MA00-2987] Length = 327 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 18 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 75 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ G +LE R + Sbjct: 76 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGALNMLEAAR---------Q 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 125 NNVKKFVYASSSSVYGDEPNLPKKEGREGNVLSPYAFTKKANEEWARLYTKLYGLDTYGL 184 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 185 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 244 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 245 ADSKYAGESFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D SK ++ +G+ P+ + E G+ V WYL N Sbjct: 297 DISKARNMLGYNPEYDFELGIKHAVEWYLIN 327 >gi|67924512|ref|ZP_00517932.1| UDP-glucose 4-epimerase [Crocosphaera watsonii WH 8501] gi|67853627|gb|EAM48966.1| UDP-glucose 4-epimerase [Crocosphaera watsonii WH 8501] Length = 334 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 149/329 (45%), Gaps = 45/329 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAG+IGS L V+V D L+Y EI Q L L V D D Sbjct: 8 ILVTGGAGYIGSHAVLSL-QKAGYNVIVYDNLSYGH-----PEIVQDVLKVELIVGDTND 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + A+++FAA V S+ + N+ GT LLE + ++ + Sbjct: 62 RTLLDQIFSSRNITAVMHFAAFIAVGESVRDPAIYYQNNVAGTLTLLE------AMIAAN 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +F+ ST +YG + +E P NP + Y+++K + ++ + YG+ ++ Sbjct: 116 IK---KFVFSSTCAIYGMPQEIPMTEKHPNNPLNAYASSKYMVEQILKDFDRAYGLKSVV 172 Query: 182 --------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLY 225 ++ S N G H PE LIPLA +T + + H+F++G DG VRD+++ Sbjct: 173 FRYFNASGADPSGNLGEDHDPETHLIPLALLTALKKREHLFIFGTDYETPDGTAVRDYIH 232 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV L + G E +N+ GN R ++ V E+ K L+ Sbjct: 233 VNDLASAHVLGLDYLFNGGE-SEMFNL-GNGNRFSVREVIEMA-------KKVTGVDFLV 283 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + RPG S K KS +GW PQ Sbjct: 284 KETDRRPGDAPILVGSSEKAKSILGWQPQ 312 >gi|160883784|ref|ZP_02064787.1| hypothetical protein BACOVA_01756 [Bacteroides ovatus ATCC 8483] gi|156110869|gb|EDO12614.1| hypothetical protein BACOVA_01756 [Bacteroides ovatus ATCC 8483] Length = 107 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 1/101 (0%) Query: 3 LIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGGAGFIGS + R VN ++ +D LTYAGNL +LK+I ++F++ DICD Sbjct: 7 IIITGGAGFIGSHVVRLFVNKYPDYHIINLDNLTYAGNLTNLKDIENKPNYTFVKADICD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 E + ++ D +++ AAESHVDRSI F TNI+ Sbjct: 67 FEMMLKIFTQYHVDGVIHLAAESHVDRSIRDPFTFARTNIL 107 >gi|296535670|ref|ZP_06897845.1| UDP-glucuronate 5'-epimerase [Roseomonas cervicalis ATCC 49957] gi|296263994|gb|EFH10444.1| UDP-glucuronate 5'-epimerase [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 36/345 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQV 57 R++VTG AGFI A + V +D LT A L+ + F F Q+ Sbjct: 15 RVLVTGAAGFI-GAALAQRLLAAGADVTGVDVLTDYYDPALKQTRLQRLRAQPGFRFRQL 73 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + + + E +PD +++ AA++ V S+ + + N+ G +LE R Sbjct: 74 DIAEPGALAAVWAEARPDYVMHLAAQAGVRYSLDHPRAYTSANVDGFLEVLEAAR----- 128 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ K F E D P S Y+ATK +++ + + H Y Sbjct: 129 ----HHPVRHLIYASSSSVYGANTKVPFQERDAVEQPVSLYAATKRANELMAQTYAHLYR 184 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +PV YGP P+ + G + LY G+ RD+ Y+++ V A+ + Sbjct: 185 LPVTGLRFFTVYGPLGRPDMAYWKFTRALFAGEPIPLYDGGRLWRDFTYIDEIVEAIARL 244 Query: 237 L--------KKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 + GRI +NIG ++ D+V AL+ + + + Sbjct: 245 AVAPPATPEEPGRISPSVPHRLFNIGNDSPVMVNDVV--------ALLERFTGREAIRQE 296 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + +PG R D S +++ IG+ P +E GL + V WY +++ Sbjct: 297 LPMQPGDVERTWADVSLLRAAIGFAPSTPLEVGLERFVTWYRNHH 341 >gi|84029609|sp|Q6GMI9|UXS1_DANRE RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UXS-1 Length = 418 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 88 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 145 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 146 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 188 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 189 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 248 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +G H + +++ I + ++G + +YG G R + YV D V L Sbjct: 249 VEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGL- 307 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L I N+G E + E L+ +L+ S SH + + +D P +R Sbjct: 308 VSLMNSNISSPVNLGNPEEH----TILEFAQLIKSLV-ASRSHIQFLPEAQDDP---QRR 359 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNKT+ ++ Sbjct: 360 RPDIRKAKLLLGWEPVVPLEEGLNKTIQYF 389 >gi|29420388|gb|AAO39691.1| putative UDP-glucose-4-epimerase [Escherichia coli] Length = 349 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 26/335 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE---ISQSNLFSFLQVD 58 ++TG AGFIGS L L+ L +V+ +D + NL+ +KE Q + F+F++ D Sbjct: 25 LITGVAGFIGSNLLEALLK-LNQKVVGLDNFATGHQANLDEVKESVSAEQWSAFTFVEGD 83 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+ E +K D +++ AA V RSI TNI G +L + Sbjct: 84 ICEPETCVEVVKGV--DHVLHQAALGSVPRSIKDPITTNNTNISGFINML---------V 132 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + F ++ YG E+ NP SPY+ TK ++ + TYG Sbjct: 133 AAKDANVRSFTYAASSSTYGDHPALPKIEENIGNPLSPYAVTKYVNELYAQVFARTYGFK 192 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +G P +IP MI +++ GDG+ RD+ ++E+ V+ Sbjct: 193 SIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMINDEPLYINGDGETSRDFCFIENVVQMNI 252 Query: 235 LVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + + YN+ +R + +F + L +AL S+ + + + R G R Sbjct: 253 LAAQSDASARDQVYNV-AVGDRTTLKQLFTV--LKNALNENGVSYNKEPEYKDFRAGDVR 309 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +K K+ +G+ PQ ++ G+ K + WY+++ Sbjct: 310 HSQADITKAKTRLGYEPQFSISEGILKAMPWYVNS 344 >gi|297563819|ref|YP_003682792.1| UDP-glucose 4-epimerase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848268|gb|ADH70286.1| UDP-glucose 4-epimerase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 320 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 61/339 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG++GS + L+ V V+D L+ G+ +++ E ++ + + Sbjct: 1 MRLLVTGGAGYVGSVVTALLLR-AGHAVTVLDDLS-TGHADAVPEGAR--------LVVA 50 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D +R A P DA+++FAA+S V S+ ++ TN+ GT LLE R Sbjct: 51 D---VREAADVLDPSVDAVLHFAAKSLVGESVADPGKYWHTNVSGTLALLEAVR------ 101 Query: 119 SQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R + S+ VYG E P P+SPY A+K + D+++ +W +G+ Sbjct: 102 ---RHGVGRVVFSSSAAVYGDPAGDAPIRETDPAVPTSPYGASKLAVDHMLESWAAAHGV 158 Query: 178 PVL------LSNCSNNYGPYHFPEK-LIPLAITRMIEG-SHVFLYG------DGQNVRDW 223 + ++ +G H E L+P + EG H ++G DG VRD+ Sbjct: 159 GAVSLRYFNVAGAHLGFGERHETETHLVPNLLRVAAEGDGHASVFGTDYPTRDGTAVRDY 218 Query: 224 LYVED----HVRALYLVLKKG--RIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSY 275 L+V D H+RAL V + G R+ GG++ R+ I+ V + ++ P+ Sbjct: 219 LHVADLADAHLRALESV-RPGVFRVHNLGTGGGHSVREVIEAVRRVTGRPVPVVDGPRRA 277 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 ++ DR + E+GW P +E Sbjct: 278 GDPAVLVAANDR-------------ARQELGWTPGRTLE 303 >gi|310831207|ref|YP_003969850.1| putative NAD-dependent epimerase/dehydratase [Cafeteria roenbergensis virus BV-PW1] gi|309386391|gb|ADO67251.1| putative NAD-dependent epimerase/dehydratase [Cafeteria roenbergensis virus BV-PW1] Length = 317 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 93/324 (28%), Positives = 148/324 (45%), Gaps = 29/324 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 L++TGG GFIGS L L N K QV++ID L+ G L +++ +++ N +L D+ + Sbjct: 7 LLITGGCGFIGSHLVEKLSNKYK-QVIIIDNLS-TGYLKNIEPFLTKYNNLIYLYGDLTN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT-TNIIGTFILLEETRLWWSCLSQ 120 E +R+ ++ + I + AA V RS+ D I+ N + FI L C Sbjct: 65 LEFLRNVFTKYNINQICHQAAIGSVPRSV--DDPMISHNNNVNAFI-----NLLLCCKDY 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K RF+ S+ VYG + E N SPY+ATK ++ + YGI + Sbjct: 118 NVK---RFVYASSSSVYGDNEILPKVESKIGNVLSPYAATKKINEIYANVFWRCYGIETI 174 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP P+ +IP I M + + GDG RD+ ++++ V A YL Sbjct: 175 GMRYFNVFGPRQDPKGAYAAVIPKFIDLMKHNKNPIINGDGTFSRDFTFIDNVVEANYLA 234 Query: 237 LKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L I GE +NIG IG L + + E+I+ R G + Sbjct: 235 LNTTNIQAFGEAFNIGAGGN-------ITIGELGEIIKTHLRFQGEIIKG-PSRKGDIQH 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 + SK +S +G++P + G+ Sbjct: 287 SHANISKAQSILGYYPAISFTKGI 310 >gi|257056372|ref|YP_003134204.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] gi|256586244|gb|ACU97377.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] Length = 308 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 37/320 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG GF+G R L L Q + + G L VD+ Sbjct: 1 MRVLITGAGGFLG----RTLAAKLHQQGSKVTAVVRPGRDPELPA-----GIKLRAVDVR 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + ++E PDA+V+ AA + S D++ TN+ T L++ S + Sbjct: 52 DRNALTAVVREQSPDAVVHLAALKSIRDSHGNEDDYRATNVDSTTNLIDALSTATSPV-- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAWGHTYGI 177 + ST VYG + +ED P +P +PY+ TK ++ + G + Sbjct: 110 ------HVVHASTVSVYGPQQQ--PNEDAPTDPRNPYARTKLDAETALETAATEGRCHAT 161 Query: 178 PVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + +N + +G H P +IP + G V + G G +VRD+++V+D A+ Sbjct: 162 VLRFANIAGGFGTVHDPNTSAIIPRVLISARNGEAVPVNGAGDSVRDYVHVQDAAEAVMA 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--RR 293 L R R+N+G G + +I + T IE +P D + Sbjct: 222 ALATPRTFGRFNVGSGQ-----------GASVSDIITTAEKVTRRPIAIERKPAVDEVKH 270 Query: 294 YAIDSSKIKSEIGWFPQENM 313 D+++I+ E+ W PQ + Sbjct: 271 IVPDTTRIRQELDWQPQHSA 290 >gi|225867432|ref|YP_002752810.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB102] gi|229187679|ref|ZP_04314816.1| UDP-glucose 4-epimerase [Bacillus cereus BGSC 6E1] gi|225787609|gb|ACO27826.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB102] gi|228595833|gb|EEK53516.1| UDP-glucose 4-epimerase [Bacillus cereus BGSC 6E1] Length = 338 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK + E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGV-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|16264188|ref|NP_436980.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium meliloti 1021] gi|307299961|ref|ZP_07579746.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] gi|15140313|emb|CAC48840.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium meliloti 1021] gi|262189116|gb|ACY30251.1| UDP-xylose synthase 1 [Sinorhizobium meliloti 1021] gi|306904850|gb|EFN35433.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] Length = 348 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 39/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ +V+ +D + G ++ + + + F + D+ + Sbjct: 30 RILVTGGAGFLGSHLCELLLG-AGHEVICLDNFS-TGLRRNIAPLKRFDTFRVIAHDVVE 87 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T +IG+ LL+ Sbjct: 88 P-------IDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLA---------- 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 + R Q ST E+YG E P+ P S Y K ++ L + ++G Sbjct: 131 ARRGARIFQASTSEIYGDPHVHPQVESYWGNVNPFGPRSCYDEGKRCAETLFFDFHKSHG 190 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + + N YGP P+ +++ I + ++G + +YGDG R + +VED + + Sbjct: 191 VEIKIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITIYGDGSQTRSFCFVEDLIDGFV 250 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 L+ + N+G E F IG L + +I + S ++++R D P Sbjct: 251 RLMASPPSLTGPVNLGNPAE-------FTIGELAEEVIRLTGSRSKIVRRPLPVDDP--- 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R+ D S E+GW P+ N+ GL T+ ++ D Sbjct: 301 RQRRPDISLATEELGWRPKVNLAEGLAHTIRYFDD 335 >gi|319784410|ref|YP_004143886.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170298|gb|ADV13836.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 345 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +V GGAGF+GS LC L+ D V+ +D + G +L + ++ FS ++ DI D Sbjct: 24 RALVAGGAGFLGSHLCERLLRD-GYDVVALDNF-HTGKRYNLNALQRNPSFSCIEHDIVD 81 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + Q D I N A + T+++G+ LLE R Sbjct: 82 -----ALPSDLQCDEIYNLACPASPPHYQADPIHTFKTSVLGSLNLLELAR--------- 127 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +++ + Q ST EVYG + F + P S Y K S++ L + TYG Sbjct: 128 -QNKAKIFQASTSEVYGDPFVHPQPESYFGNVNTHGPRSCYDEGKRSAETLFFDYSRTYG 186 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YG P+ +++ I + + G + +YG GQ R + Y +D + + Sbjct: 187 LDIRVARIFNTYGRRMQPDDGRVVSNFIVQALRGEDLTVYGSGQQTRSFCYADDLIEGFI 246 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 L+ N+G E F I L ++ + + ++++ D P Sbjct: 247 RLMNAPNAPAHPVNLGNPAE-------FTIMELATLVVDYTNARSKIVHRPLPVDDP--- 296 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S ++ +GW P+ ++ GL +TV ++ Sbjct: 297 RQRKPDISFARANLGWEPKISLSQGLARTVEYF 329 >gi|260903516|ref|ZP_05911911.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus AQ4037] gi|308107610|gb|EFO45150.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus AQ4037] Length = 334 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 156/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLF 52 M+ +VTG AGFIGSA R L N L +V+ ID +L YA LN +K + LF Sbjct: 1 MKYLVTGAAGFIGSATIRKL-NSLGYEVIGIDNINDYYDVELKYA-RLNFIK----NPLF 54 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F +DI ++ I ++ + D +++ AA++ V S++ + +N+ G +LE R Sbjct: 55 RFFNMDISNKNEIERLFEKEKFDRVIHLAAQAGVRYSLVNPHCYAESNLSGFLNVLEACR 114 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAW 171 K F+ S+ VYG K FS D +P S Y+ATK S++ + ++ Sbjct: 115 ---------KSHIKHFIYASSSSVYGLNKKVPFSTSDNVDHPVSLYAATKKSNELMAHSY 165 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT-RMIEGSHVFLYGDGQNVRDWLYVEDHV 230 H Y +P YG + P+ + P T ++I G + + +G RD+ ++ D V Sbjct: 166 SHLYQLPTTGLRFFTVYGSWGRPD-MAPFIFTEKIINGQSIDINNNGDMWRDFTHINDIV 224 Query: 231 RALYLVLKK-GRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + RI +R YNIG + +D + I L Sbjct: 225 EGIVRISDVIPRINQRWQFENSTPADSSAPYSIYNIGYGSPICLMDFIKAIENELGIEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+Y E +PG + D++ G+ P ++E G+ + V WY Sbjct: 285 KNYR--------EMQPGDVYQTYADTTAFYQATGYRPSVSVEEGIAEFVAWY 328 >gi|15890828|ref|NP_356500.1| UDP-glucuronic acid epimerase [Agrobacterium tumefaciens str. C58] gi|15159117|gb|AAK89285.1| UDP-glucuronic acid epimerase [Agrobacterium tumefaciens str. C58] Length = 339 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 46/350 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR +VTG AGFIG + + L+ D V D +T ++ SLKE +++SN F Sbjct: 1 MRYLVTGTAGFIGFYVAKRLL-DAGHFVTGFDGMTKYYDV-SLKEKRHAILARSNGFRAE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D + ++ A + +P+ I++ AA++ V S+ +I +N+IG+F +LE Sbjct: 59 IGMLEDTDALKRAAEAAEPEIIIHLAAQAGVRYSLENPRAYIDSNLIGSFNMLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 L++ K + L ST +YG+ +K F+E D P + Y+ATK S + + ++ H Sbjct: 113 --LARSLKVKHLMLA-STSSIYGANEKIPFAESDKADEPMTLYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHVRAL 233 + +P YGP+ P+ + P+ + G + +YG G RD+ Y++D V + Sbjct: 170 HKLPTTAFRFFTVYGPWGRPD-MAPIKFVDAVSNGQPIDIYGQGNMSRDFTYIDDLVEGI 228 Query: 234 -----YLVLKKGRIGER--------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + ++ R+ + NIGG + + V I K+ Sbjct: 229 VRLSAVIPSEENRVTQEGVTDTLSHHAPFRVVNIGGGQPVELMHFV--------ETIEKA 280 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + G R +++ G+ PQ +E G+ V WY Sbjct: 281 VGKPAIRNMLPMQQGDVPRTFASPDLLRALTGYVPQTPVEEGIKALVAWY 330 >gi|49257535|gb|AAH74058.1| Uxs1 protein [Danio rerio] Length = 417 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 87 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 144 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 145 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 187 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 188 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 247 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +G H + +++ I + ++G + +YG G R + YV D V L Sbjct: 248 VEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGL- 306 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L I N+G E + E L+ +L+ S SH + + +D P +R Sbjct: 307 VSLMNSNISSPVNLGNPEEH----TILEFAQLIKSLV-ASRSHIQFLPEAQDDP---QRR 358 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNKT+ ++ Sbjct: 359 RPDIRKAKLLLGWEPVVPLEEGLNKTIQYF 388 >gi|30265469|ref|NP_847846.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Ames] gi|47531036|ref|YP_022385.1| UDP-glucose 4-epimerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188288|ref|YP_031541.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Sterne] gi|167636246|ref|ZP_02394549.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0442] gi|167641429|ref|ZP_02399679.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0193] gi|170689179|ref|ZP_02880376.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0465] gi|170708660|ref|ZP_02899099.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0389] gi|177651921|ref|ZP_02934504.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0174] gi|190568934|ref|ZP_03021836.1| UDP-glucose 4-epimerase [Bacillus anthracis Tsiankovskii-I] gi|229603181|ref|YP_002869660.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0248] gi|254687108|ref|ZP_05150966.1| UDP-glucose 4-epimerase [Bacillus anthracis str. CNEVA-9066] gi|254733558|ref|ZP_05191279.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Western North America USA6153] gi|254742165|ref|ZP_05199852.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Kruger B] gi|254761637|ref|ZP_05213657.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Australia 94] gi|30260147|gb|AAP29332.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Ames] gi|47506184|gb|AAT34860.1| UDP-glucose 4-epimerase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182215|gb|AAT57591.1| UDP-glucose 4-epimerase [Bacillus anthracis str. Sterne] gi|167510604|gb|EDR86000.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0193] gi|167528361|gb|EDR91132.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0442] gi|170126442|gb|EDS95330.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0389] gi|170666822|gb|EDT17588.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0465] gi|172082625|gb|EDT67689.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0174] gi|190560001|gb|EDV13984.1| UDP-glucose 4-epimerase [Bacillus anthracis Tsiankovskii-I] gi|229267589|gb|ACQ49226.1| UDP-glucose 4-epimerase [Bacillus anthracis str. A0248] Length = 338 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|319761475|ref|YP_004125412.1| nad-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC] gi|317116036|gb|ADU98524.1| NAD-dependent epimerase/dehydratase [Alicycliphilus denitrificans BC] Length = 358 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 41/349 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ ++L E+ +Q F F+Q Sbjct: 20 LITGVAGFIGSNLLETLLK-LGQRVVGLDNFA-TGHQHNLDEVQTLVNGAQWANFHFIQG 77 Query: 58 DI-----CDRECIRSALKEF----QP-----DAIVNFAAESHVDRSILGADEFITTNIIG 103 DI C R L E QP D +++ AA V RSI + NI G Sbjct: 78 DIRILDDCRRAMTFLPLGEGRDGGQPGPIPVDYVLHQAALGSVPRSIEDPITTNSANITG 137 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKAS 163 +L R D + Q F ++ YG E++ P SPY+ TK Sbjct: 138 FLNMLVAAR--------DARVQ-SFTYAASSSTYGDHPGLPKVEEVIGKPLSPYAVTKYV 188 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQN 219 ++ + TYG + N +GP P+ +IP MI+G VF+ GDG+ Sbjct: 189 NELYADVFARTYGFNAIGLRYFNVFGPRQDPDGAYAAVIPKWAAAMIQGKDVFINGDGET 248 Query: 220 VRDWLYVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+ ++E+ V+A L + E YN+ + R ++ +F+ L AL S Sbjct: 249 SRDFCFIENSVQANLLAATSADPAALNEVYNVAVSG-RTTLNTLFD--ELKLALAGNGIS 305 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + + + R G R D K K +G+ P ++ G+++++ WY+ Sbjct: 306 YVKAPVYRDFRAGDVRHSQADIGKAKKLLGYMPSHEIKEGISQSIPWYI 354 >gi|323135720|ref|ZP_08070803.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322398811|gb|EFY01330.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 336 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/365 (26%), Positives = 159/365 (43%), Gaps = 56/365 (15%) Query: 1 MRLIVTGGAGFIGSALCRYL------VNDLKIQVLVID-KLTYAGNLNSLKEISQSNLFS 53 MR+ VTG AGFIG L R L V+ L D +L A L+ + + Sbjct: 1 MRVFVTGTAGFIGFHLARRLLELGHFVDGFDGMTLYYDPRLKEARRAILLRGDGYRDTIA 60 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 L+ D E + A + PD I++ AA++ V S+ ++ +N++GTF ++E R+ Sbjct: 61 MLE----DMEALNRAAEAGAPDVIIHLAAQAGVRYSLQNPRAYVESNLVGTFNVMEVARI 116 Query: 114 WWSCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 + R L I ST VYG+ F E D +P + Y+A+K + + + ++ Sbjct: 117 L----------KPRHLLIASTSSVYGASPSVPFHEHDRTDHPLTLYAASKKAGEAMAHSY 166 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHV 230 H + IP + YGP+ P+ + PL IE G + +Y G RD+ YV+D V Sbjct: 167 AHLWSIPTTMFRFFTVYGPWGRPD-MAPLKFLDAIENGRPIDIYNHGNMSRDFTYVDDLV 225 Query: 231 RALYLVL----------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 A+ ++ RI NIG + +D + D L K+ Sbjct: 226 EAVVRLIDCVPARDSGDDSVSPVAPFRI---VNIGRGAPVQLLDFI-------DTL-EKT 274 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ +PG R + ++ G+ PQ +++ G+ V WY + +R Sbjct: 275 LGRKAKRNYLDMQPGDVPRTFASADLLERLTGYRPQTSLDEGVKALVGWYRE----YRAT 330 Query: 335 YKELK 339 + ELK Sbjct: 331 HGELK 335 >gi|189423550|ref|YP_001950727.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] gi|189419809|gb|ACD94207.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] Length = 337 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 61/357 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 MR++VTG AGFIG LCR L+ VL +D NLNS ++S Q+ L Sbjct: 1 MRILVTGAAGFIGFHLCRRLLARGD-AVLGLD------NLNSYYDVSLKQARLAQLQPHP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 FSF+Q D+ DR + Q D +++ AA++ V S+ ++ +N+ G +LE Sbjct: 54 GFSFVQADLADRPAMEQLFSVEQFDIVIHLAAQAGVRYSLENPHAYVDSNLTGFMNILE- 112 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVL 169 C K + S+ VYG+ FS + P S Y+ATK +++ + Sbjct: 113 -----GCRHTGVK---HLVFASSSSVYGANTAIPFSIHQNVDHPVSLYAATKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVED 228 ++ + +PV YGP+ P+ + + TR I EG + ++ G+ RD+ YV+D Sbjct: 165 SYASLFNLPVTGLRLFTVYGPWGRPD-MAYFSFTRAILEGRPINIFNRGRMQRDFTYVDD 223 Query: 229 HVRALYLVLKKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLL 267 V + + +K RI YNIG N + + + Sbjct: 224 IVEGIVRIAEKPAEKNPTWSGTQPDPGTSFAPYRI---YNIGNNKPVELLQFI------- 273 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + T F+ + G D ++ + G+ P ++E G+ + V W+ Sbjct: 274 -EILEQQLGITAQKNFLPMQAGDVPATFADIDELAAATGFRPATSLEDGIARFVAWF 329 >gi|77464083|ref|YP_353587.1| dTDP-glucose 4,6-dehydratase protein [Rhodobacter sphaeroides 2.4.1] gi|77388501|gb|ABA79686.1| dTDP-glucose 4,6-dehydratase protein [Rhodobacter sphaeroides 2.4.1] Length = 337 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +VL +D G++ +++ + F ++ D+ Sbjct: 10 ILVAGGAGFVGSHLCEALLRQGH-RVLCLDSF-LTGSMENVQALCTFRDFRLIRQDVV-- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E IR L E + + N A+ + + + TN++GT LL + + Sbjct: 66 EPIR--LSETV-ERVYNLASPASPPQYQADPVHTMMTNVVGTGNLL----------ALAE 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYGI 177 RFLQ ST EVYG + ED N S + Y K +++ L + Sbjct: 113 AHGARFLQASTSEVYGDPEIHPQPEDYRGNVSCTGSRACYDEGKRAAETLCFDYSRRERA 172 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP+ P+ +++ + + + G + +YG G+ R + YV D V L Sbjct: 173 DVRVARIFNTYGPHMRPDDGRIVSNLLVQALRGEPLTVYGTGEQTRSFCYVSDLVAGLMA 232 Query: 236 VLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDR 292 +++ + N+G E + E+ L+ +L+P + H L ED P R Sbjct: 233 LMEAEETPDGAVNLGNPGE----FTIAELAALVQSLVPTAAGVVHRPLP---EDDP---R 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + K +GW PQ + GL +T W+ Sbjct: 283 RRRPDIGRAKRLLGWEPQVPLSEGLPETAAWF 314 >gi|40950657|gb|AAR97955.1| Gne [Shigella dysenteriae] Length = 342 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/335 (25%), Positives = 151/335 (45%), Gaps = 26/335 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE---ISQSNLFSFLQVD 58 ++TG AGFIGS L L+ L +V+ +D + NL+ +KE Q + F+F++ D Sbjct: 18 LITGVAGFIGSNLLEALLK-LNQKVVGLDNFATGHQANLDEVKESVSAEQWSAFTFVEGD 76 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+ E +K D +++ AA V RSI TNI G +L + Sbjct: 77 ICEPETCVEVVKGV--DHVLHQAALGSVPRSIKDPITTNNTNISGFINML---------V 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + F ++ YG E+ NP SPY+ TK ++ + TYG Sbjct: 126 AAKDANVRSFTYAASSSTYGDHPALPKIEENIGNPLSPYAVTKYVNELYAQVFARTYGFK 185 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +G P +IP MI +++ GDG+ RD+ ++E+ V+ Sbjct: 186 SIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMINDEPLYINGDGETSRDFCFIENVVQMNI 245 Query: 235 LVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + + YN+ +R + +F + L +AL S+ + + + R G R Sbjct: 246 LAAQSDASARDQVYNVAV-GDRTTLKQLFTV--LKNALNENGVSYNKEPEYKDFRAGDVR 302 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +K K+ +G+ PQ ++ G+ K + WY+++ Sbjct: 303 HSQADITKAKTRLGYEPQFSISEGILKAMPWYVNS 337 >gi|323140857|ref|ZP_08075770.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] gi|322414595|gb|EFY05401.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/353 (26%), Positives = 155/353 (43%), Gaps = 54/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L +V D N ++ E + + ++ DI Sbjct: 1 MNILVTGGAGYIGSHVVEELQKS-GFTPIVYD------NFSTGHEAAVPDEVQLVEGDIH 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++F+ DA+++FAA S V S+ ++ N+ G+ LLE R Sbjct: 54 DVRFAKHIMEQFKIDAVIHFAASSLVGESMTDPAKYYFNNVEGSLHLLEAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG + +ED P++ Y TK + + ++ + H Y + + Sbjct: 106 -GAGVDRMVFSSTAAVYGEPEAVPITEDSRLAPTNVYGRTKLAIEGMLADYDHAYDMRYV 164 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDW 223 ++ + + G H PE LIPL I + +G V ++G DG VRD+ Sbjct: 165 ALRYFNAAGASPTRDIGEDHSPESHLIPL-ILKTAQGVRKQVSIFGTDYPTADGTCVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D +A L LK G YN+G N F + ++D+ K + + Sbjct: 224 IHVCDLAKAHVLALKHLLSGGSSRVYNLGSENG-------FSVRQMIDSA--KKVTGVDF 274 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 E+R D I SS KI+ E+GW PQ + +V + W W Sbjct: 275 PVVEEERRAGDPAVLIASSAKIREELGWEPQ-------HSSVDEVISTAWKWH 320 >gi|291615343|ref|YP_003525500.1| NAD-dependent epimerase/dehydratase [Sideroxydans lithotrophicus ES-1] gi|291585455|gb|ADE13113.1| NAD-dependent epimerase/dehydratase [Sideroxydans lithotrophicus ES-1] Length = 314 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ +V GGAG+IG+ L L+ + V V+ + +L E+ N +++ D Sbjct: 7 IKTLVIGGAGYIGAHLVPQLIATGR-HVTVLGR-----SLTPRYELP--NEATYISGDFG 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ I S L Q + +A + AD LLE S+ Sbjct: 59 QRDLIGSLLANHQEGIHLAYATVPNTSFDNPLAD------------LLENLPPTVQLFSE 106 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + +S+ VYG ++ E P P SPY TK + + + T+G+ Sbjct: 107 AAERGTKLILMSSGGTVYGEANELPILETHPTKPISPYGVTKLTLENYAYLYAVTHGLKF 166 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YG P + I A+ + G + ++G +RD+LYV D + Sbjct: 167 VCIRPGNAYGAGQRPFVGQGFISTALASAMTGKPIRIFGQQGTIRDYLYVSDLASGIVSA 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L+ G++ E YNIG N+D++ I LL K + + + R + + Sbjct: 227 LQHGQLTETYNIGSGVGLSNLDVIEAIKVLL-----KEVGCSVKVENLPARAFDVKTNVL 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCW 323 DS+K+++ GW P+ E GL +T W Sbjct: 282 DSTKLETHTGWRPKVEFEEGLARTYDW 308 >gi|121533464|ref|ZP_01665292.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] gi|121308023|gb|EAX48937.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] Length = 331 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 43/328 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS LV V V D NL+ + + D+ Sbjct: 1 MKLLVTGGAGYIGSHTVHELVRAGH-TVTVFD------NLSKGHRAAVPAGVPLIVGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + L+E Q + +V+FAA+S V S+ ++ N++ T LL+ R Sbjct: 54 DQDLLTKTLREHQIEGVVHFAADSLVGESMQQPAKYYHNNVVATLALLDAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + ST VYG + +EDMP P++ Y TK + ++ + YG+ + Sbjct: 106 -EGGVGKIVFSSTAAVYGEPAEWPITEDMPTRPTNVYGRTKLVIEGMLADFAMAYGLRFV 164 Query: 181 LSNCSNNYGPY--------HFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 N G H PE L+PL + T + + V +YG DG +RD++ Sbjct: 165 SLRYFNAAGALEGGAIGEDHTPETHLVPLILKTALGQRPAVEIYGTDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---I 281 +V D A L + ++ E K ++ E GF + +I ++ + T + + Sbjct: 225 HVTDLAVAHVLASE--------HLAAGGESKIYNLGSETGFSVREVIERAKAITGVDFPV 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R R G S++I+ E+GW P Sbjct: 277 RQAPRRAGDPAVLVASSARIRRELGWQP 304 >gi|134299253|ref|YP_001112749.1| GDP-mannose 4,6-dehydratase [Desulfotomaculum reducens MI-1] gi|134051953|gb|ABO49924.1| GDP-mannose 4,6-dehydratase [Desulfotomaculum reducens MI-1] Length = 368 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 38/333 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G G+ L +L+ D QV + + + N + K+ + + F+ D Sbjct: 12 LITGITGQDGAYLAEFLL-DKGYQVHGVKRRSSLFNTARVDHLYKDPHEEKVNFFMHYGD 70 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + + IGT LLE R+ Sbjct: 71 LTDSTNLIRIIQEVQPDEIYNLAAQSHVKVSFETPEYTANADAIGTLRLLEAIRILGLT- 129 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF Q ST E+YG + + +E P+ P SPY+A K S ++ + + Y I Sbjct: 130 -----GRTRFYQASTSELYGKVQEIPQTEKTPFYPRSPYAAAKLYSYWITVNYREAYNIF 184 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A++R+ G LY G+ RDW + D+V+A++ Sbjct: 185 ACNGILFNHESPIRGETFVTRKITRAVSRIKLGLQEKLYLGNLNAKRDWGHAVDYVKAMW 244 Query: 235 LVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----ALIPKSYSHTELIR 282 L+L++ + IG+ +++ R+ +++ F E+G ++ L K Sbjct: 245 LILQQEQPEDYVIAIGDTHSV-----REFVELAFAEVGITIEWRGKGLEEKGLDKATGRV 299 Query: 283 FIEDRPGHDRRYAI-----DSSKIKSEIGWFPQ 310 +E P + R + D +K K+++GW P+ Sbjct: 300 LVEVDPCYFRPTEVDILIGDPTKAKNKLGWIPE 332 >gi|324324545|gb|ADY19805.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 321 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 153/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVKR-GYDVTIVDNF-YKGRNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G ++ +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGENILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG +NE+ + E+ ++ L KS S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSDNEKS----IKEVAEVIKKLT-KSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVAKLRELVQFQAEVTWEEGLKETIKWFREEN 319 >gi|296393693|ref|YP_003658577.1| NAD-dependent epimerase/dehydratase [Segniliparus rotundus DSM 44985] gi|296180840|gb|ADG97746.1| NAD-dependent epimerase/dehydratase [Segniliparus rotundus DSM 44985] Length = 311 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 23/328 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDI 59 MR +VTGGAGFIGS L L+ D +V V+D L+ +G +L + +++ F L VD+ Sbjct: 1 MRALVTGGAGFIGSTLVDRLLADGH-EVAVLDDLS-SGRAENLAQAQRNDRFQRLWTVDV 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + L + +P+ + + AA+ V +S+ N++GT + + Sbjct: 59 NSPQ-VADVLMDSKPEVVFHLAAQIDVRKSVADPANDAQVNVLGT-----VNVALAAVAA 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +K F S VYG E P P SPY+A+K + + + +G+ Sbjct: 113 GARKIVF---TSSGGSVYGDPTSFPVHEQTPVAPLSPYAASKVCGEIYLNMFRRLHGLDC 169 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP P ++ + ++ G ++G G N RD++YV+D V A Sbjct: 170 SHLALANVYGPRQNPHGEAGVVAIFAGALLAGKPTKVFGAGSNTRDYVYVDDVVDAFIRA 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 GER+NIG E ++ L AL+ ++ + F R G R + Sbjct: 230 AGAAGGGERFNIGTGVETSDLQ--------LHALVAQAAGVADAPEFAPARLGDLARSCL 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K +GW P ++ G+ +TV ++ Sbjct: 282 DPAKAAQVLGWEPTVDVAEGVRRTVEYF 309 >gi|289191516|ref|YP_003457457.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus sp. FS406-22] gi|288937966|gb|ADC68721.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus sp. FS406-22] Length = 301 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 43/330 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ + V+++D LT G+ N++ ++ F+ DI D Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN-NYDVIILDNLT-TGSKNNINPKAE-----FVNADIRD- 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + + +++ AA+ +V S+ N++GT +LE R K Sbjct: 54 EDLDEKINFKDVEVVIHQAAQINVRNSVENPIYDGDINVLGTINILEMIR---------K 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D + + S+ VYG + E+ NP SPY +K + + + YGI + Sbjct: 105 YDINKIIFASSVGVYGEPNYLPVDENHTINPLSPYGLSKYVGEEYIKLYNRLYGIEYAIL 164 Query: 183 NCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK- 238 SN YG P+ +I + I +M++ + ++GDG RD++YV D +A + L Sbjct: 165 RYSNVYGERQDPKGEAGVISIFIDKMLKNENPIIFGDGNQTRDFVYVGDVAKANIMALNW 224 Query: 239 KGRIGERYNIGGN-----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 K I NIG NE NI I EIGF +A+ K R G R Sbjct: 225 KNEI---VNIGTGKETSVNELFNI-IKDEIGFKGNAIYDKP------------REGEIYR 268 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ K KS + W P+ +++ G+ + V W Sbjct: 269 IYLNIKKAKS-LDWRPEVDLKEGIKRVVNW 297 >gi|86130450|ref|ZP_01049050.1| nucleoside-diphosphate-sugar epimerase [Dokdonia donghaensis MED134] gi|85819125|gb|EAQ40284.1| nucleoside-diphosphate-sugar epimerase [Dokdonia donghaensis MED134] Length = 335 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 29/258 (11%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG------NLNS 42 M+++VTGGAGFIG LC L VND L D+L+ G ++ + Sbjct: 1 MKILVTGGAGFIGYHLCEQLLKEGHTVVALDNVNDYYDPNLKYDRLSQLGISKAEASVWN 60 Query: 43 LKEISQSN-LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L SQ + F+++++ DRE + K+ D + N AA++ V SI + +I TN+ Sbjct: 61 LTVASQKHKALQFVRMNLEDREALPELFKKESFDLVCNLAAQAGVRYSIENPEVYIDTNV 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSAT 160 +G +LE SC + + K + + S+ VYG SLD + P S Y+AT Sbjct: 121 VGFLNILE------SCRNNNIK---KLVYASSSSVYGNSLDVPFTEKQSVDEPISIYAAT 171 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + H +GI + YGP+ P+ + L +I + ++ +G Sbjct: 172 KKSNELMAHTYAHLFGINAVGLRFFTVYGPWGRPDMAMFLFTDAIINNKPIKVFNEGNLS 231 Query: 221 RDWLYVEDHVRALYLVLK 238 RD+ Y+ D + + V++ Sbjct: 232 RDFTYISDIIAGVTAVIQ 249 >gi|150400847|ref|YP_001324613.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] gi|150013550|gb|ABR56001.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] Length = 326 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 27/336 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLT-YAGNLNSLKEISQSNL-----FSFL 55 +++TG AGFIG L +YL+ + +QV+ ID L Y L LKE L ++F+ Sbjct: 6 ILITGSAGFIGFHLSKYLLENYNNVQVIGIDNLNNYYNPL--LKEKRNDILKNYENYNFI 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D + + + LK D IV+ A++ V S+ + +N++GT + E R Sbjct: 64 KADFSNWNDLENNLKNKDIDLIVHLGAQAGVRYSLENPWAYEKSNLLGTMNIFELAR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHT 174 K + + + S+ VYG K FSED + P S Y+ATK S++ + + H Sbjct: 121 ------KLNIEKVVYASSSSVYGGNKKIPFSEDDIVDKPVSLYAATKKSNELMAHTYHHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y I ++ YG Y P+ +++ + +Y G RD+ Y+ D V + Sbjct: 175 YDIKMIGLRFFTVYGEYGRPDMAYFKFAKKILSNEPIDIYNYGDMERDFTYISDVVDGII 234 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 ++K E +N+G + K + V L+ K + F+ + G R Sbjct: 235 SSIEKDFDYEIFNLGNSRPVKLMYFV--------ELLEKYLNKEAEKNFLPMQDGDVLRT 286 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 D +K + + P+ ++E GL + W+L+N W Sbjct: 287 YADLNKSSKLLNYNPKVSIEEGLKRFCNWFLENKEW 322 >gi|85059347|ref|YP_455049.1| putative nucleotide sugar epimerase [Sodalis glossinidius str. 'morsitans'] gi|84779867|dbj|BAE74644.1| putative nucleotide sugar epimerase [Sodalis glossinidius str. 'morsitans'] Length = 335 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ D QV+ ID L+ Y +L L + F F + Sbjct: 1 MKFLVTGAAGFIGYHVSGRLLADGH-QVVGIDNLSDYYDVSLKQARLDGLQAVKTFRFQK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D++ I S + +++ A++ V S+ + N+IG +LE R Sbjct: 60 LDLADQQGIASLFASERFTRVIHLGAQAGVRYSLENPLAYGDANLIGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFR-FLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 +Q + L S+ VYG K FS +D +P S Y+ATK +++ + + H Sbjct: 116 ------HNQVQHLLYASSSSVYGLNRKLPFSMDDTVDHPVSLYAATKKANELMAHTYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + M+ G + +Y G+ +RD+ Y++D V A+ Sbjct: 170 YQLPTTGLRFFTVYGPWGRPDMALFKFTRAMLNGERIDVYNGGEMLRDFTYIDDIVEAIV 229 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + K +D I L DAL ++ Sbjct: 230 RLQDVIPVPDAGWTVETGSPAASSAPYRVYNIGNSQPVKLMDY---IEALEDALGIQAEK 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +PG + D+ ++ IG+ PQ + G+ + V WY D Sbjct: 287 N-----LLPMQPGDVLETSADTQELYRAIGFKPQTPVTEGVKRFVKWYRD 331 >gi|226306287|ref|YP_002766247.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis PR4] gi|226185404|dbj|BAH33508.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis PR4] Length = 329 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 147/332 (44%), Gaps = 47/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V+VID L+ GN +++ ++ F++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLERGHEVVVIDDLS-TGNADAVPAGAE-----FIEGDVG 53 Query: 61 DREC-IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I D +++FAA+S V S+L +++ N++ T LLE R+ + Sbjct: 54 ALAADILGNAGSPVFDGVLHFAAQSLVGESVLHPEKYWRGNVVTTIELLEAIRVSGTP-- 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST YG ++ E P P++PY ATK + D+ + ++ +G+ Sbjct: 112 -------RLVFSSTAATYGEPEQSPIVETAPTRPTNPYGATKLAIDHAITSYSIAHGLGA 164 Query: 180 LLSNCSNNYGPYH-------FPEKLIPLAITRMIEG-SHVFLYG------DGQNVRDWLY 225 N G Y LIPL + +E + ++G DG VRD+++ Sbjct: 165 TSLRYFNVAGAYKSAGENRVIETHLIPLVLQVALEQRDKISVFGTDWPTPDGTAVRDYIH 224 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V D A L L+ GE YN+G GF + +I T L Sbjct: 225 VLDLAEAHLLALESSVPGEHRIYNLGSGA-----------GFSVREVIAACARVTGLPIN 273 Query: 284 IED---RPGHDRRYAIDSSKIKSEIGWFPQEN 312 +ED R G S K +E+GW P Sbjct: 274 VEDASRRLGDPAVLIASSDKAIAELGWTPTRT 305 >gi|332992236|gb|AEF02291.1| capsular polysaccharide biosynthesis protein I [Alteromonas sp. SN2] Length = 338 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 158/353 (44%), Gaps = 46/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS 53 M+++VTG AGFIG+A+ +YL+N V+ ID + L ++ + F+ Sbjct: 1 MKILVTGAAGFIGAAVSQYLINRGD-DVVGIDNINDYYDIALKHARLEQVQNSAAGERFT 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+++ + DR + + ++ + D +V+ AA++ V SI + ++ N++G +LE R Sbjct: 60 FIKMGVEDRPEMAALFEDQKFDKVVHLAAQAGVRYSIENPNAYVDANLVGFMNILEGCR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWG 172 +K + S+ VYG+ + FSE + S Y+A+K +++ + + Sbjct: 119 ------HNKVGHLVYA--SSSSVYGANETMPFSEQHNVDHQVSLYAASKKANELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP+ P+ + ++EG + +Y G + RD+ Y++D V Sbjct: 171 HLYNLPTTGLRFFTVYGPWGRPDMALFKFTKAILEGKTIQVYNFGNHRRDFTYIDDIVEG 230 Query: 233 LYLVLKK-GRIGERYNIGGNN--ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 + L + E ++ + K V+ IG + + L++FIE Sbjct: 231 VIRSLDNVAKPNESWDASAPDPSSSKAPYKVYNIG---------AQTPVHLLKFIETLEA 281 Query: 287 -------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +PG D S + ++ G+ P +++ G+ V WY D Sbjct: 282 SLGVEAKKELLPLQPGDVPDTYADVSSLVNDTGYKPSTSIDVGVKNFVDWYKD 334 >gi|118480479|ref|YP_897630.1| UDP-galactose 4-epimerase [Bacillus thuringiensis str. Al Hakam] gi|118419704|gb|ABK88123.1| UDP-galactose 4-epimerase [Bacillus thuringiensis str. Al Hakam] Length = 338 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMKKHNVKNFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK + E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGV-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|290968979|ref|ZP_06560514.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] gi|290780935|gb|EFD93528.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] Length = 309 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 27/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGS + L+ +V+V+D NL++ ++ + F + DI Sbjct: 1 MNILITGGAGFIGSHIGDALIAAGH-RVIVVD------NLSTGRKENIPPQAVFYEADIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + + +A+ + AA++ V S+ E N++G +LE R Sbjct: 54 DREYMENIFSQEHIEAVYHEAAQTMVPYSLAHPWEDAELNVMGLVGILELCR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ S+ VYG + E P S Y TK +++ + + + +P + Sbjct: 106 -RHTVRKFIFSSSAAVYGDNTRVPLKETEATTPLSFYGLTKCTAEAYIRMYHDIFQVPYV 164 Query: 181 LSNCSNNYGPYHFP--EKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG E + ++ + +G + ++GDG+ RD++YV+D RA L Sbjct: 165 ILRYANVYGERQGGNGEGGVVFVFSQALAQGKEITVFGDGEQTRDFVYVKDVARANVCAL 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + YNIG N E + L + L+ + + T + + R G R + Sbjct: 225 QANGTEGTYNIGTNIETT-------VNALKEMLVYIAGTPTH-VHYEPARSGDIYRSVLA 276 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 ++K E+GW P + GL +T ++ Sbjct: 277 NTKAVQELGWEPTTKLLGGLQQTYRYF 303 >gi|218670335|ref|ZP_03520006.1| putative nucleoside-diphosphate-sugar epimerase protein [Rhizobium etli GR56] Length = 279 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 20/273 (7%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F + D+ D +RS K D I + AA + S ++ TN+ GT +L+ Sbjct: 24 FEVILGDVRDPAQMRSVAKGV--DTIFHLAALIAIPYSYQAPSSYVDTNVHGTLNVLQGA 81 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R +Q ST EVYG+ SE P SPYSA+K +D + ++ Sbjct: 82 L---------DAGVGRVIQTSTSEVYGTARFVPISESHPLQAQSPYSASKIGADAIAYSY 132 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 ++ +PV ++ N YGP +IP I++++ G G RD+ +V+D Sbjct: 133 HSSFDLPVTIARPFNTYGPRQSARAVIPTVISQLLSGRTTLKLGALSPTRDFNFVQDTCD 192 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L L +G+ NIG +E D V I ++ + L RP + Sbjct: 193 GFLALAACDEAVGQTVNIGSGSEISIGDTVRLIADIIGVSVEIECDEQRL------RPVN 246 Query: 291 D--RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R D+S I S G+ P+ ++E GL TV Sbjct: 247 SEVERLCCDNSLITSLTGFSPRYSLEEGLKATV 279 >gi|83815765|ref|YP_445889.1| UDP-glucose 4-epimerase [Salinibacter ruber DSM 13855] gi|83757159|gb|ABC45272.1| UDP-glucose 4-epimerase [Salinibacter ruber DSM 13855] Length = 328 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 52/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS + R LV + V+V+D NL+ + + +F+ D+ Sbjct: 1 MRVLVTGGAGYIGSTVARQLV-ETGDDVIVLD------NLSQGHRAAVPDDAAFVHGDLN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L E +P+AI++FA+ + V S+ ++ N+ L++ S Sbjct: 54 DRGLIDRTLAEHRPEAIMHFASHTLVGESMEEPFLYLDENVRCGMNLMK---------SA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK-----------ASSD--YL 167 + D RF+ ST ++G+ ++ ED+ +P SPY +K + D Y Sbjct: 105 VEHDVDRFILSSTANLFGTPERIPIDEDVTVDPGSPYGESKFILERTLHWLDETEDLSYA 164 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQN 219 L + + G N G H PE LIP+ + + + + ++G DG Sbjct: 165 ALRYFNAAGA------AGPNQGEDHAPETHLIPIVLEVALGQRDKIVIFGDDYDTPDGTC 218 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 VRD+++V D +A L L G R YN+ GN + ++ V E + H Sbjct: 219 VRDYVHVLDLAQAHVLALNALDDGSRVYNL-GNGKGYSVREVIETAR-------RVTGHE 270 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 RPG S KI+ E+GW P+ + Sbjct: 271 IPAEEGAPRPGDPPVLIASSDKIREELGWAPEHS 304 >gi|75763932|ref|ZP_00743565.1| CDP-4-dehydro-6-deoxy-D-glucose 4-reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488580|gb|EAO52163.1| CDP-4-dehydro-6-deoxy-D-glucose 4-reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 319 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 26/327 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + N+ ++ ++DI DR Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQARIVLFIRTPSNFGRLKDIIK-NIETY-EIDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TNIIGT +++ + W +C Sbjct: 65 KQVQDAIKKVNPDYIFHLAAYG-VNSAHTDYMHAIETNIIGTCNIIQAAK-WVNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENSINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I ++++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGESEEPHKIFSYIILQVLQNKDVNLTFCNQ-LRDYCYIENIIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAIDSSK 300 E +NIG ++ + ++ L +++ I R D K Sbjct: 233 QNEIFNIGSGT-------IYPLKHYVELLFKHLKTNSRPNYGAIPSRTNERWVPEADVQK 285 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDN 327 IK+ + W P+ N+E G+ KTV WY +N Sbjct: 286 IKNSLSWEPRINIEEGIIKTVNWYKNN 312 >gi|297560538|ref|YP_003679512.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844986|gb|ADH67006.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 330 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 33/348 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ + +V+ +D G ++ ++ F ++ D+ + Sbjct: 9 RALVTGGAGFLGSHLCERLL-ERGTRVVCLDNFA-TGRAQNVAHLAGHPWFELMEADLTE 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D + + A+ + + E + +GT LE C Sbjct: 67 PFTLEEPV-----DTVFHLASAASPPDYLRLPVETLEVGSLGTRNALE-------CA--- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ R + ST EVYG + E P P S Y K ++ L +A G Sbjct: 112 ERHGARLVLASTSEVYGDPLEYPQRETYWGNVNPVGPRSVYDEAKRYAESLTMAHHRARG 171 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 V ++ N YGP + +++P + + +EG + + GDG R YV+D VR L Sbjct: 172 ADVGIARIFNCYGPRMRADDGRMVPTFVNQALEGRPLTVAGDGHQTRSLCYVDDTVRGLI 231 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G NIG + E +++ + + + S + ED P H RR Sbjct: 232 ALADSETTGP-VNIGSDEELSVLNLARVV-----LGVTGTRSEITFVERPEDDP-HFRR- 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 D + +GW P+ ++ GL +TV +++D + L + P N Sbjct: 284 -PDIRLAEQALGWRPRVRLDEGLRRTVAYFVDQRDRYEDLPEGTAPAN 330 >gi|332558958|ref|ZP_08413280.1| NAD-dependent epimerase/dehydratase precursor [Rhodobacter sphaeroides WS8N] gi|332276670|gb|EGJ21985.1| NAD-dependent epimerase/dehydratase precursor [Rhodobacter sphaeroides WS8N] Length = 337 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 147/332 (44%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +VL +D G++ +++ + F ++ D+ Sbjct: 10 ILVAGGAGFVGSHLCGALLRQGH-RVLCLDSF-LTGSMENVQALCNFREFRLIRQDVI-- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E IR L E + + N A+ + + + TN++GT LL + + Sbjct: 66 EPIR--LSETV-ERVYNLASPASPPQYQADPVHTMMTNVVGTGNLL----------ALAE 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYGI 177 RFLQ ST EVYG + ED N S + Y K +++ L + Sbjct: 113 AHGARFLQASTSEVYGDPEIHPQPEDYRGNVSCTGSRACYDEGKRAAETLCFDYSRRGRA 172 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP+ P+ +++ + + + G + +YG GQ R + YV D V L Sbjct: 173 DVRVARIFNTYGPHMRPDDGRIVSNLLVQALRGEPLTVYGTGQQTRSFCYVSDLVAGLMA 232 Query: 236 VLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDR 292 +++ + N+G E + E+ L+ L+P + H L ED P R Sbjct: 233 LMEAEETPDGAVNLGNPGE----FTIAELAALVQTLVPTAAGVVHRPLP---EDDP---R 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + K +GW PQ + GL +T W+ Sbjct: 283 RRRPDIGRAKRLLGWEPQIPLSEGLPETAAWF 314 >gi|326486384|gb|ADZ76215.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 358 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 80 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILK---AKD 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 137 GYDPVVHI-CSSSEVYGKAKTGIKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 195 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 196 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYY 254 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG I GE +NI G F++ ++D L+ S + +R +ED Sbjct: 255 LLSLESQKGNIPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 307 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+SKIKS I W Sbjct: 308 RPIDADYQMFDNSKIKSFIDW 328 >gi|325971635|ref|YP_004247826.1| UDP-glucuronate 4-epimerase [Spirochaeta sp. Buddy] gi|324026873|gb|ADY13632.1| UDP-glucuronate 4-epimerase [Spirochaeta sp. Buddy] Length = 334 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 39/337 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS---------QSNLFSF 54 +VTG AGFIG L + L++ V+ D NLN E+S + F F Sbjct: 15 LVTGAAGFIGFHLTQRLLSQ-GCSVIGFD------NLNDYYEVSLKEERLRLLACDNFYF 67 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + D+ D++ + ++ D ++N AA++ V SI ++ +N++G +LE Sbjct: 68 YKADLADKKALDDIFEQHAIDYVINLAAQAGVRYSIDNPYAYLQSNLVGFLNILE----- 122 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 +C K + S+ VYG K +S D +P S Y+ATK S++ + A+ H Sbjct: 123 -ACRHHTVK---HLVYASSSSVYGLNSKIPYSTTDQVDHPVSLYAATKKSNELMAHAYTH 178 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP YGPY P+ R++EG + +Y +G RD+ YV+D + A+ Sbjct: 179 LYQIPSTGLRFFTVYGPYGRPDMAYFSFAKRIMEGKGIKVYNNGDMWRDFTYVDDIIAAI 238 Query: 234 YLVL----KKGRIGERYNIG--GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 ++ + +RY I GNN+ + EI L+ + + + ++ + Sbjct: 239 ERIIPNPPEPNEAKDRYKIYNIGNNKPVRLSRFVEI---LETCLGREATK----EYLPMQ 291 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D + + + + P +E+GL V W+ Sbjct: 292 SGDVYQTYADVTDLMKDFDFKPDTPLENGLASFVSWF 328 >gi|218672240|ref|ZP_03521909.1| GDP-mannose 4,6-dehydratase protein [Rhizobium etli GR56] Length = 363 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 28/282 (9%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 67 DMTDSTNLIRVIQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 123 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 181 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQDRLYLGNLDAKRDWGHAREYVRG 239 Query: 233 LYLVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLLD----ALIPKSYSHTELIRFIE 285 ++L+L++ G+ G R +D F ++G +D + K Y T +E Sbjct: 240 MWLMLQQDEPGDYVLATGETHSVRSFVDKAFAKVGMPIDWRGSGVEEKGYDKTSGQCVVE 299 Query: 286 DRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVC 322 P + R + D +K +++GW E+ L++ V Sbjct: 300 IDPAYFRPTEVDLLIGDPTKAHTQLGW----KHETSLDQLVA 337 >gi|328765878|gb|EGF75977.1| hypothetical protein BATDEDRAFT_15114 [Batrachochytrium dendrobatidis JAM81] Length = 340 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 79/346 (22%), Positives = 156/346 (45%), Gaps = 42/346 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 +++TG AGFIG L + + + +V+ ID + Y L + L++++ N F+F++ D Sbjct: 2 ILITGTAGFIGFHLSKRFLEEGH-RVIGIDNINDYYDSQLKKDRLEQLTNEN-FTFIKAD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + I ++++P+ ++N AA++ V S+ ++ +NI+G +LE R + Sbjct: 60 LEDLDTINQTFEKYKPEIVINLAAQAGVRYSLENPHAYVRSNIVGFTNILEACRYYKVG- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ FS D +P S Y+ATK S++ + YG+ Sbjct: 119 --------HLIYASSSSVYGANTTKPFSTSDNIDHPLSLYAATKKSNELFAHTYSQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + L ++ + ++ G +RD+ YV+D V ++ + Sbjct: 171 PTTGLRFFTVYGPWGRPDMALFLFTKAIVNDEPIDVFNHGNMMRDFTYVDDIVESITRLT 230 Query: 238 KKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 K+ + YNIG N+ + ++ + I L K+Y + Sbjct: 231 KRPAQPNPDWSSANPDPGSSYAPYKVYNIGNNSPVRLMEFIEAIENKLGKTAKKNYLPLQ 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 E D + +I + P+ ++ G+N+ + WY+ Sbjct: 291 AGDVPETYANVDDLF--------RDIDFQPKTTIQDGVNEFIDWYI 328 >gi|307316686|ref|ZP_07596129.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|306897884|gb|EFN28627.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] Length = 348 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/335 (24%), Positives = 147/335 (43%), Gaps = 39/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ +V+ +D + G ++ +++ + F + D+ + Sbjct: 30 RILVTGGAGFLGSHLCELLLG-AGHEVICLDNFS-TGLRRNIAPLTRFDTFRVVAHDVVE 87 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T +IG+ LL+ Sbjct: 88 P-------IDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLA---------- 130 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 + R Q ST E+YG E P+ P S Y K ++ L + ++G Sbjct: 131 ARRGARIFQASTSEIYGDPHVHPQVESYWGNVNPFGPRSCYDEGKRCAETLFFDFHKSHG 190 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + + N YGP P+ +++ I + ++G + +YGDG R + +V+D + + Sbjct: 191 VAIKIVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITIYGDGSQTRSFCFVDDLIDGFI 250 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 L+ + N+G E F IG L + +I + S ++++R D P Sbjct: 251 RLMASPPSLTGPVNLGNPAE-------FTIGELAEEVIRLTGSRSKIVRRPLPVDDP--- 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R+ D S E+GW P+ N+ GL T+ ++ D Sbjct: 301 RQRRPDISLATEELGWRPKVNLAEGLAHTIRYFDD 335 >gi|290581333|ref|YP_003485725.1| putative UDP-glucose 4-epimerase [Streptococcus mutans NN2025] gi|254998232|dbj|BAH88833.1| putative UDP-glucose 4-epimerase [Streptococcus mutans NN2025] Length = 338 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/359 (26%), Positives = 167/359 (46%), Gaps = 54/359 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG++GS C L+N Q++V+D L ++ +L ++KEI+ + F+F Q DI Sbjct: 3 KILVTGGAGYLGSHTCVELLNQ-DYQLVVVDNLLHSSFKSLTAIKEITGKD-FTFYQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ + + ++ A+++FA V+ S ++ N GT LL+ + +SC Sbjct: 61 RDKKSLEAIFEKEAITAVIHFAGLKIVNESTSIPLDYYANNFSGTITLLQVMQ-QFSC-- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AWG 172 K F S+ VYG+ SE+ P + +PY TK + +++ AW Sbjct: 118 --KNCIFS----SSASVYGNKAPAPVSEEAPRSVMTPYGRTKMMIEDVLMDVSVSDSAWN 171 Query: 173 HT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 Y P+ ++ S G P P L+P I+++ G V ++G DG Sbjct: 172 IVILRYFNPI-GAHSSGELGEDPQGLPTNLLPY-ISQVALGKLDRVRVFGGDYDTKDGTG 229 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +RD+++V D R L+K G YN+G ++++ E+G ++ IP Sbjct: 230 IRDYIHVVDLARGHVAALQKLIAGSGLSIYNLGTGKGTSVLELIQEMGEIVGHPIP---- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + + R G D SK + E+ W Q ++ K +C ++W W+ Y Sbjct: 286 ----YQIVGRRAGDIAVSYADVSKAEKELNWHAQYDL-----KRMC---QDSWRWQKKY 332 >gi|213028170|ref|ZP_03342617.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 89 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 4/73 (5%) Query: 266 LLDALIPKS----YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 LL+ L P+ ++ +LI F++DRPGHD RYAID+SKI E+GW PQE ESG+ KTV Sbjct: 3 LLEELAPQKPQGVANYHDLITFVDDRPGHDLRYAIDASKIARELGWTPQETFESGMRKTV 62 Query: 322 CWYLDNNWWWRPL 334 WYL N WW+P+ Sbjct: 63 QWYLANEAWWKPV 75 >gi|294494801|ref|YP_003541294.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] gi|292665800|gb|ADE35649.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] Length = 303 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 34/324 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG G +GS L + K V+V+D T++ + + Q + DI Sbjct: 4 ILITGGLGQVGSYLTDRFCRENK--VIVLDN-TFSPCRHEVPAGVQ-----LVIGDIQGP 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +R Q D +++ AA+ V+RS+ NI+GT LLE R + Sbjct: 56 EAVRLV---GQADVVIHTAAQIDVNRSMEQPMFDCENNILGTLNLLEAAR---------Q 103 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + RF+ S+ +YG + SE+ P P SPY +K + + L + + +P+ + Sbjct: 104 TNLKRFIYFSSAAIYGETLQMPVSENHPTQPLSPYGVSKLTGEQYALMYHRAFNLPISVL 163 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 N Y P P IT+ IE G ++GDG+ RD++ V D V + L++ Sbjct: 164 RPFNIYSPRQDPSNPYSGVITKFIERTKAGQSPVIFGDGEQTRDFISVHDIVDLVQLLVE 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K+ IG+ +N G + + + + D+ +P Y R G R D Sbjct: 224 KEDAIGKVFNAGTGKQTSVNRLAGIVQHVFDSDLPLEYRQA--------RIGDIRHSVAD 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 S K+ +G+ P+ ++E GL + V Sbjct: 276 ISAAKT-LGFVPKVSLEDGLAEFV 298 >gi|303249101|ref|ZP_07335343.1| UDP-glucose 4-epimerase [Desulfovibrio fructosovorans JJ] gi|302489516|gb|EFL49460.1| UDP-glucose 4-epimerase [Desulfovibrio fructosovorans JJ] Length = 334 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 150/346 (43%), Gaps = 51/346 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + D + Y + N ++ DI ++ Sbjct: 5 ILVTGGAGYIGSHTCKAL-KAAGFTPVTFDNMVYGHDW-------AVNWGPLVRGDILNK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++P A+++FAA ++V S+ +++ N+ G+ LL R + Sbjct: 57 GELDEVFAEYKPAAVLHFAAFAYVGESVADPEKYYRNNVAGSLSLLSAMR---------R 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YG+ ++ +ED P P SPY +K + ++ + YG+ Sbjct: 108 AGCKHIVFSSTCATYGAPERVPLTEDHPLRPLSPYGTSKLMIEQMLRDFDAAYGMTYTAL 167 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL I + V ++G DG VRD++++ Sbjct: 168 RYFNAAGADPDGEIGEDHNPETHLIPLVIAAALGRIPRVEVFGTDYPTPDGTAVRDYIHI 227 Query: 227 EDHVRALYLVLKK---GRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 D A L +KK G YN+G GN+ R+ I V ++ K E Sbjct: 228 ADLADAHILAVKKLLDGGASAVYNLGTGTGNSVREVIRAVEKVSG-------KPVPMVEG 280 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYL 325 R D PG YA DS I E+GW P+ N+E+ + W++ Sbjct: 281 PRRAGDSPG---LYA-DSGAIIRELGWQPKYMNLEAIVETAWRWHV 322 >gi|159900946|ref|YP_001547193.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893985|gb|ABX07065.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 318 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 37/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TG AGF+GS LC +++ V + + +T GN ++ + F F++ D+ Sbjct: 1 MRVLITGAAGFLGSHLCERFLSEGHSVVGMDNFIT--GNPENIAHLVGREGFQFIRHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L DA+++FA+ + + + + +GT + L Sbjct: 59 NYIFLPGPL-----DAVLHFASPASPIDYLELPIQTLKVGALGTH----------NALGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST EVYG E P P Y K ++ + +A+ HTY Sbjct: 104 AKAKGARFLIASTSEVYGDPQVHPQPETYWGHVNPIGPRGVYDEAKRFAEAMTMAY-HTY 162 Query: 176 -GIPVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ + N YGP +++P I + + G + LYGDG R + +V D V Sbjct: 163 HGVQTRIVRIFNTYGPRMRLADGRVVPNFIQQALRGEALTLYGDGLQTRSFQFVGDLVEG 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGH 290 +Y +L + E NIG +E + E +++A+ P +R I+D P + Sbjct: 223 VYRLLLSDEV-EPVNIGNPHEFT----MREFAEIVNAMTGNPAGTVIKPELR-IKDDPQN 276 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + D SK K + W PQ +++GL +T+ W+ + Sbjct: 277 RQP---DISKAKRVLNWEPQVTLQAGLEQTIPWFAEQ 310 >gi|229176125|ref|ZP_04303618.1| UDP-glucose 4-epimerase [Bacillus cereus MM3] gi|228607360|gb|EEK64689.1| UDP-glucose 4-epimerase [Bacillus cereus MM3] Length = 338 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKES 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T +L C Sbjct: 59 VLNREKMNEIFLENSIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K +F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHHVKKFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHKSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL+ I E YN+G ++++ + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLETKGI-EAYNLGTGKGYSVLEMIKAFEEVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAVCFADVSKAKRELGWEAEYGLEEMCLDSWRWQVNN 331 >gi|284028668|ref|YP_003378599.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836] gi|283807961|gb|ADB29800.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836] Length = 317 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 138/333 (41%), Gaps = 33/333 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ + +V +D G ++ + + F+ + D+ + Sbjct: 6 VVVTGGAGFLGSHLCERLLGEGH-RVTCLDNF-LTGKPENVAHLLEDPAFTLTRADLTEF 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + D +++FA+ + + + + IGT W L K Sbjct: 64 VHVPGPV-----DLVLHFASPASPIDYLRLPIQTLKVGAIGT----------WHALGLAK 108 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF+ ST EVYG ED P P Y +K ++ L A+ G+ Sbjct: 109 EKGARFVLASTSEVYGDPQVHPQPEDYWGHVNPIGPRGVYDESKRYAEALTTAYRGAEGV 168 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP P + IP I + + G + + GDG R +V+D V + Sbjct: 169 DTAIVRIFNTYGPRMRPNDGRAIPTFIRQGLAGEPLTVAGDGSQTRSVCHVDDTVDGILR 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G G NIG +ER + I ++ S S E + D PG R Sbjct: 229 LAASGHPGP-VNIGNPDERSVLRIAQDV-----IAATGSRSTIEFVDRPVDDPGVRRP-- 280 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D++ + + W P + GL+ TV W+ + + Sbjct: 281 -DTALAEELLSWKPAIDWREGLSATVAWFREQD 312 >gi|197117253|ref|YP_002137680.1| UDP-galacturonate 4-epimerase [Geobacter bemidjiensis Bem] gi|197086613|gb|ACH37884.1| UDP-galacturonate 4-epimerase [Geobacter bemidjiensis Bem] Length = 336 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 55/355 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 +++VTG AGFIGS L L+ +V+ +D L ++ SLKE + L F ++ Sbjct: 3 KILVTGAAGFIGSHLSHRLLAKGH-EVVGLDNLNDYYDV-SLKEGRLARLEGKPGFRLVR 60 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +++ DRE I + D++VN AA++ V SI +I +NI G +LE Sbjct: 61 MNLEDREGIARLFAAEKFDSVVNLAAQAGVRYSIQNPYAYIDSNISGFINILE------G 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 C K + S+ VYG+ + MP+ +P S Y+ATK +++ + Sbjct: 115 CRHNKVK---HLVYASSSSVYGA------NTTMPFSVHHNVDHPVSLYAATKKANELMAH 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + YG+P YGP+ P+ + L ++EG + ++ G+ RD+ +V+D Sbjct: 166 TYSSLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNYGKMQRDFTFVDDI 225 Query: 230 VRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + V+ GE YNIG NN ++++ I L AL Sbjct: 226 VEGVSRVIDSVPPGEAGWSGATPDPGTSYAPYKIYNIGNNNP---VELLRFIEVLEKALG 282 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + I+ D P YA D + ++G+ P ++E G+ + V WY D Sbjct: 283 KEAQKNLLPIQ-AGDVPA---TYA-DVDDLMRDVGFKPATSIEDGIARFVAWYRD 332 >gi|150395913|ref|YP_001326380.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150027428|gb|ABR59545.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 341 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 124/240 (51%), Gaps = 19/240 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR ++TG AGFIG + + L+++ V+ D +T ++ +LKE + +SN F + Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHF-VVGFDGMTPYYDV-TLKERRHAILQRSNGFKAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + DR + A + +P+ I++ AA++ V S+ ++ +N++G+ W Sbjct: 59 RAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDSNLVGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L K + L + ST +YG+ +K F+E D P + Y+ATK S + + ++ H Sbjct: 109 NMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + + + G + +YG+G+ RD+ Y++D V ++ Sbjct: 169 LYEVPTTAFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESI 228 >gi|296139544|ref|YP_003646787.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162] gi|296027678|gb|ADG78448.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162] Length = 327 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 50/337 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG++GS +C ++ + V V+D L+ GN ++ + +F++ D+ Sbjct: 1 MRLLVTGGAGYVGS-VCTQVLLEQGHDVTVLDDLS-TGNREAVPAGA-----TFVEGDVA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R L + + D +++FAA+S V S+ ++ N++ T LL+ + L+ Sbjct: 54 --TAARQILADGEFDGVLHFAAKSLVGESVTHPHKYWQGNVVTTLSLLD------AMLAA 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG + +ED P++ Y ATK + D + ++ YG+ + Sbjct: 106 GVP---RLVFSSTAATYGEPESVPITEDARTAPTNTYGATKLAIDAAITSYATAYGLAAV 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + T + + + + ++G DG VRD+++V Sbjct: 163 SLRYFNVAGSYAGIGENREVETHLIPLVLQTALGQRADIAVFGADYPTADGTAVRDYVHV 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +D A L L R G +N+G G + R+ ID E+ L E+ Sbjct: 223 KDLADAHLLALDHARTGAHDIFNLGSGEGFSVRQVIDTCREVTGL------------EIP 270 Query: 282 RFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGL 317 DR D + SS K E+GW P G+ Sbjct: 271 EVAADRRAGDPAVLVASSRKAHDELGWRPAHTELRGI 307 >gi|295134100|ref|YP_003584776.1| VipB-like polysaccharide biosynthesis protein [Zunongwangia profunda SM-A87] gi|294982115|gb|ADF52580.1| VipB-like polysaccharide biosynthesis protein [Zunongwangia profunda SM-A87] Length = 333 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 38/340 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAGFIGS LC+ L+ DL +V+ +D + NLN K+ F+ ++ DI Sbjct: 15 VLVTGGAGFIGSNLCKSLL-DLNARVICLDNFSTGKKANLNLFKDHQN---FALIEADIR 70 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A K D I++ AA V RSI NI G + + L Sbjct: 71 DADACLRACKNV--DYILHQAALGSVPRSIKDPQTTNAVNING----------FLNMLVA 118 Query: 121 DKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++Q RF+ ++ YG ED P SPY+ TK ++ + TYG+ Sbjct: 119 AKENQVKRFIYAASSSTYGDAAALPKVEDHIGKPLSPYAITKYVNELYADVFQKTYGLNS 178 Query: 180 LLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +G + P+ +IP + +++ + GDG RD+ Y+++ ++A L Sbjct: 179 IGLRYFNVFGRHQDPDGAYAAVIPKFVKKLMNHRSPVINGDGSFSRDFTYIDNVIQANLL 238 Query: 236 VL---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + + + YNI ER +++ + EI L + Y I I + G R Sbjct: 239 AMLTETPEAVNQIYNIAC-GERTDLNQLVEI------LKAELYKFDPEILDISAKYGPAR 291 Query: 293 RYAIDSS-----KIKSEIGWFPQENMESGLNKTVCWYLDN 327 + + S K K + + P+ ++++GL + V WY +N Sbjct: 292 QGDVPHSQASIEKAKKLLEYQPEFSVKAGLAEAVSWYWNN 331 >gi|148925613|ref|ZP_01809301.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845623|gb|EDK22714.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni CG8486] Length = 344 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILK---AKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPVVHI-CSSSEVYGKAKTGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG I GE +NI G F++ ++D L+ S + +R +ED Sbjct: 241 LLSLESQKGNIPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 293 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+SKIKS I W Sbjct: 294 RPIDADYQMFDNSKIKSFIDW 314 >gi|332519466|ref|ZP_08395933.1| NAD-dependent epimerase/dehydratase [Lacinutrix algicola 5H-3-7-4] gi|332045314|gb|EGI81507.1| NAD-dependent epimerase/dehydratase [Lacinutrix algicola 5H-3-7-4] Length = 333 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 34/336 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 +VTGGAGFIGS + YL+ + +V+++D + + N+N+L + S+ L ++ DI Sbjct: 14 FLVTGGAGFIGSNIVDYLLKNDAKRVVILDNFSTGHHKNINNLIKDSRCEL---IEGDIR 70 Query: 61 DRE-CIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWS 116 D E C +S + D +++ AA V RSI L ++E + + I +E+ Sbjct: 71 DLETCKKSTI---DVDYVLHQAALGSVPRSINDPLTSNEVNVSGFLNMLIAAKES----- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K R + ++ YG + ED+ P SPY+ TK ++ + TYG Sbjct: 123 ------KSVKRMVYAASSSTYGDSEGLPKVEDVIGKPLSPYAVTKYVNELYADVFYKTYG 176 Query: 177 IPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + N +GP PE +IP + + + ++ + GDG++ RD+ ++E+ ++A Sbjct: 177 LETIGLRYFNVFGPKQDPEGAYAAVIPKFVGQFLNKENIVINGDGEHSRDFTFIENVIQA 236 Query: 233 ---LYLVLKKGRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L K + + YN+ G N N ++V +I L L YS T +++ DR Sbjct: 237 NIKAALAEKPEAVNQVYNVAFGENTNLN-ELVDDIKSGLKNL-NVDYSAT-IVKHGPDRV 293 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D +K K I + P + + G+ T WY Sbjct: 294 GDVKHSLADITKAKKLIDYNPLYSFKEGIKITTEWY 329 >gi|39997339|ref|NP_953290.1| capsular polysaccharide biosynthesis protein I [Geobacter sulfurreducens PCA] gi|39984230|gb|AAR35617.1| capsular polysaccharide biosynthesis protein I [Geobacter sulfurreducens PCA] gi|298506276|gb|ADI84999.1| UDP-galacturonate 4-epimerase [Geobacter sulfurreducens KN400] Length = 336 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 53/351 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 ++VTG AGFIG L + L+ D +V+ +D L Y NL + L+++ FSF++ Sbjct: 4 ILVTGAAGFIGFHLTKRLL-DRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + + D +VN AA++ V SI ++ +N++G +LE C Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAW 171 K + S+ VYG+ + MP+ +P S Y+ATK +++ + + Sbjct: 117 HHGVK---HLVYASSSSVYGA------NTAMPFSIHHNVDHPVSLYAATKKANELMAHTY 167 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+P YGP+ P+ + L ++EG + +Y G+ RD+ YV+D V Sbjct: 168 SSLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVYNFGKMQRDFTYVDDIVE 227 Query: 232 ALYLVLKKGR------IGER------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + V+ + G R YNIG NN E+ ++A I + Sbjct: 228 GVTRVMDRTPEPNPAWSGARPDPGTSYAPYRIYNIGNNNP-------VELLAFIEA-IEQ 279 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T + + G D + +++G+ P + G+ + V WY Sbjct: 280 NLGITAQKNLLPLQAGDVPATYADVDDLMNDVGFKPATPIGEGIERFVEWY 330 >gi|51893853|ref|YP_076544.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] gi|51857542|dbj|BAD41700.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] Length = 321 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 52/339 (15%) Query: 1 MR-LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 MR +++TGGAGF+GS + R+L L+ V+V+D LT ++E F +D Sbjct: 5 MRTVLITGGAGFVGSHVVERFLAEGLR--VVVVDNLT-----TGVREHVPPGA-EFHNID 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSI----LGADEFITTNIIGTFILLEETRLW 114 I E S + + +PD IV+ AA+ V S+ L AD N+ GT +LE R Sbjct: 57 ILTPE-FTSLVGKVKPDTIVHLAAQVSVAVSVRDPVLDAD----VNVGGTLRVLEAAR-- 109 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + F F S+ VYG +ED P++P SPY K +++ + A+ Sbjct: 110 -----EHQVPNFVFS--SSAAVYGIPSSLPVTEDAPFSPLSPYGIAKVAAEGYIRAYCFL 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+ ++ SN +GP ++ + ++ G +GDG RD++YV+D Sbjct: 163 HGLKAVVMRYSNVFGPRQKAAGDGGVVANFVEAILRGHPPVFFGDGGQTRDFIYVKDVAD 222 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--- 288 A + + + G +E ++I + L L +T L ++ P Sbjct: 223 ATLKAI------DYLDKSGTSEYLVVNISSGVETSLRTL------YTLLCELVKQAPEPI 270 Query: 289 ------GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G R +D+ K + +GW P ++E G+ +TV Sbjct: 271 LTPPREGDIRHSCLDNRKAREYLGWLPGYSLEQGILETV 309 >gi|23007290|ref|ZP_00049226.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magnetotacticum MS-1] Length = 122 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 76/115 (66%), Gaps = 8/115 (6%) Query: 220 VRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +RDW++V+DH A++ ++++G +GE Y +G + ER N+ +V + LL+ + + E Sbjct: 1 MRDWIHVDDHNDAVWAIVERGAVGETYLVGADGERSNLQVVQD---LLE-IFGRDRDDYE 56 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRP 333 L + DR GHD RYAID++++++E+GW P + GL++TV WY ++ WWRP Sbjct: 57 L---VADRAGHDLRYAIDATRLRTELGWEPAFTSFGDGLSRTVDWYREHEEWWRP 108 >gi|242238646|ref|YP_002986827.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech703] gi|242130703|gb|ACS85005.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech703] Length = 335 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 148/348 (42%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ +VTG AGFIG LC+ L +D V+ ID L ++ SLK+ + L F F Sbjct: 1 MKFLVTGAAGFIGFHLCQSL-SDAGHDVVGIDSLNSYYDV-SLKDARLAILRELPGFRFE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + + + D +V+ AA++ V S+ + +N+IG +LE R Sbjct: 59 RMDIADSPAVAALFAAERFDRVVHLAAQAGVRYSLENPMVYAESNVIGHLNILEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG K FS D +P S Y+ATK S++ + A+ H Sbjct: 116 ------HSGVGHLVYASSSSVYGLNSKTPFSTGDSVDHPISLYAATKKSNELMAHAYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YGIP YGP+ P+ + ++ G + +Y G RD+ YV D V + Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFKFTRAILAGESIDIYNHGDMWRDFTYVTDIVDGVI 229 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V +++G YNIG K +D V + + Sbjct: 230 SVADLIPQRDPSWTVEQGTPATSSAPYRIYNIGNGQPVKLMDFV--------TALERELG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F+ + G + D+ + + G+ P+ +E G+ V WY Sbjct: 282 IEAIKNFMPMQAGDVYQTYADTDDLFAVTGYRPRVGVEQGVRAFVEWY 329 >gi|285016927|ref|YP_003374638.1| nucleoside-diphosphate-sugar epimerases protein [Xanthomonas albilineans GPE PC73] gi|283472145|emb|CBA14652.1| putative nucleoside-diphosphate-sugar epimerases protein [Xanthomonas albilineans] Length = 321 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 27/334 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGF+G+ CR L + V+ +D Y L + + +D Sbjct: 1 MTVLVTGAAGFVGAYTCRALAARGET-VVGLDNYNDYYDPQLKRDRVAALCPQVDIRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DRE + + E +P+ +V+ AA++ V S+ ++ +N++G +LE L Sbjct: 60 LTDREGLSALFDETRPERVVHLAAQAGVRYSLQNPQAYVDSNLVGFVNMLE--------L 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + ++ Q + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 112 CRHRRVQ-HLVYASSSSVYGDSAAAPFSEDQRIDQPRSLYAATKAANELMGHTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ ++ D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLLFSRAVLAGRPIEVFNHGRMRRDFTFIADIVAGVLGA 229 Query: 237 LKKGRIG----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L I +N+G + + +++ IG + A + +L R ++ PG Sbjct: 230 LDHPCIDALPHRVFNLGNH---RPVELERFIGVIETA---AGRTAEKLYRPMQ--PGDMI 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D+++ + G+ P +E+GL + V W D Sbjct: 282 ETMADTARAHAAFGFDPTTPIETGLPQVVQWCRD 315 >gi|299137753|ref|ZP_07030934.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298600394|gb|EFI56551.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 328 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 34/345 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +TG AGFIGS+L R L+ +V +D L+ + + N L +I F + ++ D Sbjct: 3 RYFITGIAGFIGSSLARALLASGH-EVRGVDNLSCSDSSN-LSDILSDIDFCQMDINETD 60 Query: 62 REC--IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 R C +R D +++ AA + V RSI T N GT +L ++ Sbjct: 61 RLCDFMRGV------DFVLHEAALASVPRSINDPMSSHTANATGTLSVL---------MA 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ++ YG + E M P SPY+ K + + V ++ +G+ Sbjct: 106 AQTAGVSRVVYAASSSAYGDQEAHPKHESMCPAPLSPYAVQKLAGENYVKSFWAVHGLEG 165 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +GP + +I IT M+ G ++GDG RD+ YV + V A L Sbjct: 166 VCLRYFNVFGPGQAADSPYSGVIARFITDMLAGEQSTIFGDGFQSRDFTYVANVVSANLL 225 Query: 236 VLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + R GE +N+G + + + +LD +Y R G Sbjct: 226 ACQAPREAVAGEVFNVGTGRSQTLNTLYATLARILDFQAAPTYKKM--------RAGDVF 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 + D S+ +S +G+ P E GL +TV WY+ P + E Sbjct: 278 QSQADISRARSALGYSPTHTFEQGLEETVSWYIQKTLKIVPKHFE 322 >gi|148976961|ref|ZP_01813616.1| putative nucleotide sugar epimerase [Vibrionales bacterium SWAT-3] gi|145963835|gb|EDK29095.1| putative nucleotide sugar epimerase [Vibrionales bacterium SWAT-3] Length = 267 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 16/241 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA+ L +V+ ID L Y +L + LK I NL +F++ Sbjct: 1 MKYLVTGVAGFIGSAVSERLCAAGH-EVIGIDNLNDYYEVSLKHDRLKRIEHENL-TFIE 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + + D +++ AA++ V SI + +N++G +LE R Sbjct: 59 LDLADREGIAELFAQQKFDRVIHLAAQAGVRYSIDNPMAYADSNLVGHLAILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + + S+ VYG K F + D +P S Y+ATK S++ + + H Y Sbjct: 115 ---HNKVEHLVY--ASSSSVYGLNQKMPFHTADSVDHPISLYAATKKSNELMAHTYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y +G +RD+ Y++D V + Sbjct: 170 DVPTTGLRFFTVYGPWSRPDMAMFKFANLIVAGKEIDIYNNGDMMRDFTYIDDIVEGIIR 229 Query: 236 V 236 V Sbjct: 230 V 230 >gi|302880036|ref|YP_003848600.1| NAD-dependent epimerase/dehydratase [Gallionella capsiferriformans ES-2] gi|302582825|gb|ADL56836.1| NAD-dependent epimerase/dehydratase [Gallionella capsiferriformans ES-2] Length = 340 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 94/354 (26%), Positives = 158/354 (44%), Gaps = 50/354 (14%) Query: 1 MRLIVTGGAGFIGSALCR--YLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+L++TGG GF+GS L L D +++V D L G+ +L + F+F D Sbjct: 1 MKLLITGGCGFLGSNLASDALLRGD---EIVVFDNLYRNGSRENLPWLQAQGKFTFEHGD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + I ++ F+PDAI + A + + SI N++GT LLE R Sbjct: 58 IRNHNDIARIVQSFKPDAIFHLAGQVAMTTSIANPRMDFEVNVMGTHNLLEAVR------ 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKA 162 + + ST++VYG L++ +SE + P +N SPY +K Sbjct: 112 --QHAPEATVVYSSTNKVYGDLEQYTYSENETRYLCKEQPNGFNEQTQLDFHSPYGCSKG 169 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFL------ 213 ++D +L + +G+ ++ S+ YG F + I + +E S L Sbjct: 170 AADQYMLDYARIFGLKTVVFRHSSMYGGRQFASYDQGWIGWFCQKAVESSKGLLKEPFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLV----LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 G G+ VRD L+ +D R LY+ + K + G+ +NIGG E N + E+ LL+ Sbjct: 230 SGTGKQVRDVLHADDMKR-LYMAAVSNIDKAK-GQAFNIGGGIE--NSLSLLELFTLLEK 285 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + ++T L R R + D +K + + W P + + G+ + V W Sbjct: 286 ISNTKLNYTRL----PVRESDQRVFVADLAKARQLLNWQPMVSAQDGVARMVEW 335 >gi|158520537|ref|YP_001528407.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] gi|158509363|gb|ABW66330.1| NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3] Length = 351 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 99/356 (27%), Positives = 151/356 (42%), Gaps = 49/356 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----YAGNLNSLKEISQSNLFSFL 55 M ++VTGG GF+GS +C Y QV+ D +T AG + + L Sbjct: 1 MNVLVTGGCGFLGSHVCEYYARRGD-QVVSYDNMTKHELERAGFATGKARNHNRDFLAGL 59 Query: 56 QVDICDRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 VD+ + IR A + D IV+ AA+ + S+ +++N++GTF +LE Sbjct: 60 GVDLVTAD-IRDAEQLIDSAAGCDYIVHTAAQPAMTISVEDPALDLSSNVMGTFNVLETA 118 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYG-----SLDKG---------LFSEDMPY--NPSS 155 R + + +T VYG +L +G ED P + Sbjct: 119 R----------RLKVPVASCATIHVYGNRINDTLTEGQARYARQPEAIDEDHPVLEGTLT 168 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHV 211 P A+KA ++ V + TYG+ + YGP F + + AI R + + Sbjct: 169 PLHASKAGAELYVRTYIETYGVTAASFRLTGIYGPRQFGGEDHGWVANFAI-RSVLKRPL 227 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 +YG G+ VRD ++ D RA +K R+ YNIGG I ++ I AL+ Sbjct: 228 TIYGTGKQVRDIVFAGDVCRAFDAFYQK-RVPGIYNIGGG-PNTAISLLECI-----ALL 280 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K IRF DR G R + D SK +S +GW P+ E G+ + W N Sbjct: 281 EKLNGEKPDIRFGPDRHGDLRYFVCDVSKARSLLGWRPEVKPEPGIRALLEWIRQN 336 >gi|83309160|ref|YP_419424.1| UDP-glucose 4-epimerase [Magnetospirillum magneticum AMB-1] gi|82944001|dbj|BAE48865.1| UDP-glucose 4-epimerase [Magnetospirillum magneticum AMB-1] Length = 341 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 83/323 (25%), Positives = 132/323 (40%), Gaps = 31/323 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-SLKEISQSNLFSFLQVDI 59 + +VTGGAGFIGS L L+ D +V VID N + + S + + + D+ Sbjct: 8 LHCLVTGGAGFIGSHLVDRLLADGH-RVSVIDNFANGREENLADAKASAPDRLTVHRADV 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + IR D + + AA + + SI + N+ GT +LE R Sbjct: 67 ADADIIRPMFAGV--DWVFHLAAMADIVPSIQDPMLYHRANVDGTIAVLEAAR------- 117 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ ++ YG + E +P PY+ TK + V+ W TY + Sbjct: 118 --AAGVKRFVYTASSSCYGIPETYPTPETAAPSPMYPYALTKWVGEQYVMHWAQTYDLAA 175 Query: 180 LLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP H + + + + + G + GDG RD+ +V D A Sbjct: 176 VSLRLFNVYGPRHRTAGTYGAMFGVFLAQRLAGKPYTVVGDGSQTRDFTFVADVADAFVT 235 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 GE +N+G + +++ + EI IPK RPG Sbjct: 236 AANSKISGEIFNVGSDGT-YSVNRIIEILGGDKLHIPK-------------RPGEPDCTW 281 Query: 296 IDSSKIKSEIGWFPQENMESGLN 318 D +KIK +GW P+ ++E G+ Sbjct: 282 ADIAKIKRVLGWKPKVSLEEGVG 304 >gi|332678521|gb|AEE87650.1| UDP-glucose 4-epimerase [Francisella cf. novicida Fx1] Length = 339 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKVSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +E A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LDKAKLTKVFQEHHIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K ++F+ S+ VYG +K F+EDMP + ++PY ATK + ++ Sbjct: 114 QEYK-VYKFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATKLMLEDILRD--------- 163 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 164 -LQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKAKRELGFETQKTIDDICDDMLKW 330 >gi|78357230|ref|YP_388679.1| UDP-galactose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219635|gb|ABB38984.1| UDP-galactose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 327 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 151/330 (45%), Gaps = 50/330 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V GGAG+IGS + R L+ + V V D L+ G+L S+ + F++ D+ D Sbjct: 5 KVLVCGGAGYIGSHMVRALMRAGHLPV-VFDNLS-TGHLESIGQAE------FVRGDLLD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +R E+ DA+++F+A+S V S++ + T N+ GT LLE R Sbjct: 57 MQALRRVFGEYCFDAVMHFSAKSLVGESVVHPALYYTNNVTGTCNLLEAMR--------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + R + ST VYG + +ED P P +PY +K + ++ YG+ + Sbjct: 108 ESGVGRLVFSSTAAVYGDPQAPVIAEDHPCLPVNPYGRSKLMVETMLADHAAAYGLRSVS 167 Query: 182 --------SNCSNNYGPYHFPEK-LIP---LAITRMIEGSHVF----LYGDGQNVRDWLY 225 ++ G H PE L+P LA +G +F DG VRD+++ Sbjct: 168 LRYFNAAGADEDGGIGEAHSPETHLLPNVLLAALGRNDGLKIFGDDYTTPDGTCVRDYIH 227 Query: 226 VED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 V D H+ AL Y+ L G +N+G N F + +LDA + ++ Sbjct: 228 VTDLCSAHLAALEYMTLHAG--AAVFNLGNGNG-------FSVREILDAAC--RVTGVDI 276 Query: 281 IRFIEDRPGHDRRYAI-DSSKIKSEIGWFP 309 +E R D + D+++ ++ +GW P Sbjct: 277 PFTVEGRRAGDPPMLVADAARARTALGWTP 306 >gi|317968581|ref|ZP_07969971.1| WbnF [Synechococcus sp. CB0205] Length = 340 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 48/348 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-TY------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+A+ L+ + +V+ +D + TY L L++ + LF Sbjct: 5 VLVTGAAGFIGAAVALRLLERGE-RVVGLDNINTYYSPELKVARLQRLEDAAGDWLFK-- 61 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q+D+ + I QP A+V+ AA++ V SI +I +N+ G +LE Sbjct: 62 QLDLENGAEIADLFAAHQPRAVVHLAAQAGVRYSIENPAAYIQSNLDGFGNVLE------ 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 C Q + + S+ VYG + FSE N P S Y+ATK +++ + + H Sbjct: 116 GCRHQGVE---HLVYASSSSVYGGNRQMPFSEQHAVNHPVSLYAATKKANELMAHTYSHL 172 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ L ++ G + ++ GQ RD+ Y++D V + Sbjct: 173 YGLPATGLRFFTVYGPWGRPDMAPMLFAKAILSGQPIRVFNQGQMQRDFTYIDDIVEGVI 232 Query: 235 LVLKKGRIGE-RYNIGGNNERKNI--DIVFEIGFLLDALIPKSYSHTELIRFIE------ 285 L + + +N N +F IG + T L+RFIE Sbjct: 233 RCLDQPATADPNFNPLDPNPATAAVPHRLFNIG---------NSQPTPLLRFIELLEQAL 283 Query: 286 ----------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +PG A D+S +++ +G+ P +E GL + W Sbjct: 284 GVEAIKDFQPMQPGDVVATAADTSALEAWVGFRPNTPLEVGLRRFAAW 331 >gi|224373679|ref|YP_002608051.1| NAD-dependent epimerase/dehydratase family protein [Nautilia profundicola AmH] gi|223589783|gb|ACM93519.1| NAD-dependent epimerase/dehydratase family protein [Nautilia profundicola AmH] Length = 347 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/359 (23%), Positives = 156/359 (43%), Gaps = 53/359 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL-----------------N 41 M++++TG AGFIG L + L+ + +V+ +D + Y NL N Sbjct: 1 MKILITGTAGFIGFHLAKRLI-ERGDEVIGLDNINDYYDVNLKYGRLEETGIKREEIEYN 59 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L ++ + F+++++ D+ I KE + D + + AA++ V S+ D +I +NI Sbjct: 60 KLITSNKYTNYRFIKLNLEDKAGIDKLFKEEKFDKVCHLAAQAGVRYSLENPDAYIQSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSAT 160 +G +LE R D S+ VYG K FS +D +P S Y+AT Sbjct: 120 VGHMNILEAVR---------HNDVKALSYASSSSVYGLNKKQPFSTDDNVDHPISLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K + + + + + Y IP YGP+ P+ + + ++E + +Y G+ Sbjct: 171 KKADELMSHTYSYLYNIPTTGLRFFTVYGPWGRPDMALFKFVKNILEDKPIDVYNYGEMQ 230 Query: 221 RDWLYVEDHVRALYLVLKK---------GRIGER------YNIGGNNERKNIDIVFEIGF 265 RD+ Y++D + + V+ GR E YNIG + K +D + Sbjct: 231 RDFTYIDDIIEGVVRVIDNPPKSNPEWDGRASESIAPYKVYNIGNGSPVKLMDFI----- 285 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I +S + +PG D++ ++ ++G+ P +++ G+ V WY Sbjct: 286 ---EAIEESLGKEAKKNLLPMQPGDVPSTWADTTDLEKDLGYKPYTDVKEGIKNFVEWY 341 >gi|24380401|ref|NP_722356.1| putative UDP-glucose 4-epimerase [Streptococcus mutans UA159] gi|24378425|gb|AAN59662.1|AE015029_1 putative UDP-glucose 4-epimerase [Streptococcus mutans UA159] Length = 338 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 91/359 (25%), Positives = 168/359 (46%), Gaps = 54/359 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG++GS C L+N +++V+D L ++ +L ++KEI+ + F+F Q DI Sbjct: 3 KILVTGGAGYLGSHTCVELLNQ-DYRLVVVDNLLHSSFKSLTAIKEITGKD-FTFYQADI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ + + ++ A+++FA V+ S ++ N GT LL+ + +SC + Sbjct: 61 RDKKSLEAIFEKEAITAVIHFAGLKIVNESTSIPLDYYANNFSGTITLLQVMQ-QFSCKN 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AWG 172 F+ S+ VYG+ SE+ P + +PY TK + +++ AW Sbjct: 120 --------FIFSSSASVYGNKAPAPVSEEAPRSVMTPYGRTKMMIEDVLMDVSVSDSAWN 171 Query: 173 HT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 Y P+ ++ S G P P L+P I+++ G V ++G DG Sbjct: 172 IVILRYFNPI-GAHSSGELGEDPQGLPTNLLPY-ISQVALGKLDRVRVFGGDYDTKDGTG 229 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +RD+++V D R L+K G YN+G ++++ E+G ++ IP Sbjct: 230 IRDYIHVVDLARGHVAALQKLVAGSGLSIYNLGTGKGTSVLELIQEMGEIVGHPIP---- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + + R G D SK + E+ W + ++ K +C ++W W+ Y Sbjct: 286 ----YKIVGRRAGDIAVSYADVSKAEKELNWHARYDL-----KRMC---QDSWRWQKKY 332 >gi|19553125|ref|NP_601127.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032] gi|62390761|ref|YP_226163.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032] gi|21903430|sp|Q45291|GALE_CORGL RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|21324691|dbj|BAB99314.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032] gi|41326099|emb|CAF20262.1| UDP-GLUCOSE 4-EPIMERASE [Corynebacterium glutamicum ATCC 13032] Length = 329 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 139/333 (41%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS L+ V +ID + GN ++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGH-DVTIIDNFS-TGNREAVPADAR-----LIEGDVN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E + +V+FAA S V S+ +E+ N++ LL+ R Sbjct: 54 D--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG D +EDMP P++ Y ATK S DY + ++ +G+ Sbjct: 104 -AHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMIEGSH---VFLYG------DGQNVRDWL 224 N G Y LIPL + + H F++G DG VRD++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVL--QVATGHREKTFMFGDDWPTPDGTAVRDYI 220 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ D +A L L+ G+ +N+G G + ++ +++ E+ H Sbjct: 221 HILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREV-----------TGHPI 269 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S K K E+GW P+ Sbjct: 270 PAEVAPRRAGDPATLIASSEKAKQELGWTPEHT 302 >gi|302382250|ref|YP_003818073.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] gi|302192878|gb|ADL00450.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] Length = 327 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 30/335 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQ 56 M ++VTG AGFIG + L+N+ + V+ ID Y L L+ ++ F ++ Sbjct: 1 MTVVVTGAAGFIGMHVAERLLNEGQ-AVIGIDSFNAYYDPALKRLRARRLATHGGFRMIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + + +++ +++ AA++ V SI + +N+ G +LE R Sbjct: 60 ADIADPALMSAIVRDHGIRQVIHLAAQAGVRYSIDNPFAYERSNLAGHLSILEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGH 173 + S+ VYG LD F ED P +P S Y+ATK S + L ++ Sbjct: 116 -----HGGVEHLVYASSSSVYGDRPLDGRGFREDDPAVSPVSLYAATKRSCELLSHSYAS 170 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG P YGP P+ +++ G + +YG+G+ RD+ YV+D V + Sbjct: 171 LYGFPQSGLRFFTVYGPMGRPDMAYFGFTEKIMRGDPIEVYGEGRMARDFTYVDDIVDGI 230 Query: 234 YLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPG 289 VL E YNIG + + + ++ I L AL E I+ + +PG Sbjct: 231 LGVLVNPPTAGGHEIYNIG---DSRPVGLMEMIDLLEKAL------GREAIKIMRPMQPG 281 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK+ + G+ P+ + GL + V W+ Sbjct: 282 DVTATYADISKLHALTGYQPKVELADGLPRFVDWW 316 >gi|254456297|ref|ZP_05069726.1| dTDP glucose 4, 6-dehydratase, putative [Candidatus Pelagibacter sp. HTCC7211] gi|207083299|gb|EDZ60725.1| dTDP glucose 4, 6-dehydratase, putative [Candidatus Pelagibacter sp. HTCC7211] Length = 335 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 97/361 (26%), Positives = 158/361 (43%), Gaps = 38/361 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTG AGFIGS LC L+ K +V + + L +S NL ++ DI Sbjct: 1 MRILVTGAAGFIGSHLCETLLTQ-KHKVKAFVRYNSTQSQGWLDNLSHKNL-EVVRGDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +AL D + N AA V S FI TNI+G + + + Sbjct: 59 DFDSVNNAL--LNCDYVFNLAASISVPYSFKNPQTFIDTNILGALNI-------FRASTI 109 Query: 121 DKKDQFRFLQISTDEVYGS---LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + +QIS+ EVYG+ + + +E SPY+A+K ++D L ++ G+ Sbjct: 110 KKNKIKKIIQISSSEVYGNDLLKNSNVLTEKTITVSESPYAASKIAADNLAISMFKATGL 169 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 PV+++ N +GP +IP I++ + ++ G+ + RD++YV D V L Sbjct: 170 PVVVARPFNTFGPRQSLRAVIPTIISQFATISKKNNTIKVGNLKTSRDFVYVRDTVSGLI 229 Query: 235 LVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +LK + GE YNI K D++ + K H I + R Sbjct: 230 SLLKPSCKPGEIYNICTGKSFKIYDVIES--------LKKITGHNPKIIISKKRFRKAEV 281 Query: 294 YAIDSS--KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLN 351 Y + S KI + W P+ SG K L + W K + + +K+ N+ Sbjct: 282 YNLRGSNKKIYTSNKWKPKYLNHSGFKKA----LKETYEW------FKEEKNLTKYTNIQ 331 Query: 352 E 352 + Sbjct: 332 K 332 >gi|301164385|emb|CBW23943.1| DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 638R] Length = 336 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GFIGS L ++ + ++ V+D L G+ ++L+ + F++ D Sbjct: 1 MKYLITGGCGFIGSNLAAEVLKRGE-ELFVLDNLFRYGSGSNLEWLRTKGDFTYYPYDTR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE QPD I + A + + SI TN +GTF LL+ R + S Sbjct: 60 NTNDVETVIKEVQPDYIFHLAGQVAMTTSISNPRLDYETNALGTFNLLDAVRKY----SP 115 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 D L ST++VYG + F E + + SPY +K + Sbjct: 116 DSV----ILYSSTNKVYGDFEYLHFREESTRYVCEEYPNGFPESISLDFHSPYGCSKGCA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIE-GSHVF-----LYG 215 D +L + YG+ ++ S+ YG + + I + +E +H + G Sbjct: 172 DQYLLDFHRIYGLKTIVFRHSSMYGSNQHATYDQGWIGWFCQKALEIKNHTLQKPFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 G+ VRD L+ ED V LY K GE +NIGG E + I Sbjct: 232 TGKQVRDVLHGEDVVN-LYFTAKDIDKAYGEVFNIGGGIENSLSLLELFDLLENKLDIEM 290 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +Y+ + R + + D K +GW P+ + ESG++K + W Sbjct: 291 TYTQ------LPWRESDQKVFVADIEKATRILGWLPKVSKESGIDKMLAW 334 >gi|182679576|ref|YP_001833722.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635459|gb|ACB96233.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] Length = 332 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 92/334 (27%), Positives = 149/334 (44%), Gaps = 30/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQVD 58 +IVTG AGFIG + L+ D V+ ID Y L + + + FS +++D Sbjct: 4 IIVTGAAGFIGMHVAERLL-DRGEAVVGIDIFNSYYDPTLKAARAARLESRPSFSMVRMD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D E + +K IV+ AA++ V SI + +N+ G +LE R Sbjct: 63 IADHESFLALVKRSGVRRIVHLAAQAGVRYSIDNPFAYEHSNLAGHLSVLEACR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG L F E P + P S Y+ATK S + + ++ Y Sbjct: 117 -HAKIEHLVYA--SSSSVYGDRPLTASGFKETDPVDAPVSLYAATKRSCELISQSYARLY 173 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G P YGP+ P+ +++ G + +YGDG+ RD+ +++D V + Sbjct: 174 GFPQSGLRFFTVYGPWGRPDMAYYGFTEKILAGHPIEVYGDGKMSRDFTFIDDIVDGIIG 233 Query: 236 VLKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR-FIEDRPGHD 291 +L + E YNIG + +D++ + L E ++ F +PG Sbjct: 234 ILDCPPLMGDHEIYNIGDSQPVSLMDMIATLELALG---------REAVKIFRPMQPGDV 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK+ S IG+ P+ N+ +GL + V W L Sbjct: 285 TATYADVSKLYSLIGYQPKVNLATGLQRFVHWRL 318 >gi|116629952|ref|YP_815124.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|116630171|ref|YP_815343.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|282851447|ref|ZP_06260812.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 224-1] gi|300361074|ref|ZP_07057251.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|300361288|ref|ZP_07057465.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|311110238|ref|ZP_07711635.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|311110416|ref|ZP_07711813.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|116095534|gb|ABJ60686.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|116095753|gb|ABJ60905.1| UDP-galactose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|282557415|gb|EFB63012.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 224-1] gi|300353693|gb|EFJ69564.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|300353907|gb|EFJ69778.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|311065392|gb|EFQ45732.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|311065570|gb|EFQ45910.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] Length = 330 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS R L+ + V+V+D L Y G+ ++ + ++ F Q DI Sbjct: 1 MRVLVIGGAGYIGSHAVRKLIEEGN-DVVVLDSL-YTGHRKAVDKKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTNLVSKILRDENIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAM--------D 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +ED P +P +PY TK + ++ GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPKTLPITEDTPLDPINPYGETKMMMEKIMHWADKADGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAISGDGNFTIFGDDYDTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V++ + + +N+G N++I+ + IP + Sbjct: 225 QVEDLIDAHILALKHVMETNK-SDVFNLGTAQGYSNLEILEAAKKVTGIDIPYTIG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSSKARKVLGWKPKHENVDDVIATAWNWH 320 >gi|222086847|ref|YP_002545381.1| UDP-glucuronic acid epimerase protein [Agrobacterium radiobacter K84] gi|221724295|gb|ACM27451.1| UDP-glucuronic acid epimerase protein [Agrobacterium radiobacter K84] Length = 334 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 52/356 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR ++TG AGFIG L + L++D V+ D +T ++ LKE +++SN F + Sbjct: 1 MRYLITGTAGFIGFHLAKRLLDDGHF-VVGFDGMTPYYDVK-LKEKRTAILARSNGFKAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D+ + A + +PD IV+ AA++ V S+ ++ +N++G+F +LE R Sbjct: 59 TGMLEDKAALDHAAELAEPDVIVHLAAQAGVRYSLENPRSYVDSNLVGSFNVLELARSI- 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 Q K L ST VYG+ +K F+E D + Y+ATK S + + ++ H Sbjct: 118 ----QPK----HLLLASTSSVYGANEKIPFAESDKADEQMTIYAATKKSMELMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHV 230 + IP + YGP+ P+ +A+ + +E + +YG+G+ RD+ Y++D V Sbjct: 170 FHIPTTVFRFFTVYGPWGRPD----MALFKFVEAIKHDRPIEIYGEGKMSRDFTYIDDLV 225 Query: 231 RALYLV-------------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 + + L K NIGG + V I +L Sbjct: 226 EGIVKLIGVIPSEENRVVSDTISDTLSKNAPFRIVNIGGGQPVGLMAFVETIEAMLGK-- 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ H + +PG + + G+ PQ +++G+ + V WY +N Sbjct: 284 -RAIRH-----MLPMQPGDVHNTYAVPDLLVALTGFKPQIEVDAGVRRFVEWYQEN 333 >gi|118497997|ref|YP_899047.1| NAD dependent epimerase [Francisella tularensis subsp. novicida U112] gi|118423903|gb|ABK90293.1| NAD dependent epimerase [Francisella novicida U112] Length = 324 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 27/328 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 14 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 72 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 121 NNVKKFVYASSSSVYGDEPNLPKKEGREGNILSPYAFTKKANEEWARLYTKLYGLDTYGL 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 181 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 240 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 241 ADSKYAGEAFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK ++ +G+ P+ + E G+ V WY Sbjct: 293 DISKARNMLGYNPEYDFELGIKHAVEWY 320 >gi|94264686|ref|ZP_01288467.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] gi|93454852|gb|EAT05099.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase [delta proteobacterium MLMS-1] Length = 550 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M++++TG AGFIG+AL L+ + +V+ +D + Y L + L + F+ + Sbjct: 217 MKILITGSAGFIGNALALRLL-ERGDEVIGVDNVNAYYDPTLKESRLNRVRGCAGFTEER 275 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 V + DR + ++ QP +VN AA++ V S+ ++ NI+G +LE R Sbjct: 276 VSLEDRPAMERVFRQHQPQRVVNLAAQAGVRYSLENPHSYVDANIVGFTNILEGCR---- 331 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 + F S+ VYG+ + +MP+ +P S Y+A+K + + + Sbjct: 332 ---HHGVEHLVF--ASSSSVYGA------NTEMPFSVHHNVDHPLSLYAASKKAGELMAH 380 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +PV YGP+ P+ + L +++ G + ++ G + RD+ Y++D Sbjct: 381 TYAHLYRLPVTGLRFFTVYGPWGRPDMALFLFTQKILAGEPIDVFNYGNHRRDFTYIDDI 440 Query: 230 VRALYLVLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + L G + YNIG + + ++++ I L + L Sbjct: 441 VEGVIRTLDHPAEPNPDWNGATPDPCTSTAPYRLYNIGAH---RPVELMHYIEVLEENLG 497 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 K+ + + +PG D + +K+++G+ P +E G+ + V WYL+ Sbjct: 498 RKAEKN-----LLPLQPGDVPDTYADVADLKADVGYEPTTPVEEGVARFVEWYLE 547 >gi|294507799|ref|YP_003571857.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] gi|294344127|emb|CBH24905.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] Length = 337 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 52/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS + R LV + V+V+D NL+ + + +F+ D+ Sbjct: 10 MRVLVTGGAGYIGSTVARQLV-ETGNDVIVLD------NLSQGHRAAVPDDAAFVHGDLN 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L E +P+AI++FA+ + V S+ ++ N+ L++ S Sbjct: 63 DRGLIDRTLAEHRPEAIMHFASHTLVGESMEEPFLYLDENVRCGMNLMK---------SA 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK-----------ASSD--YL 167 + D RF+ ST ++G+ ++ ED+ +P SPY +K + D Y Sbjct: 114 VEHDVDRFILSSTANLFGTPERIPIDEDVTVDPGSPYGESKFILERTLHWLDETEDLSYA 173 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQN 219 L + + G N G H PE LIP+ + + + + ++G DG Sbjct: 174 ALRYFNAAGA------AGPNQGEDHAPETHLIPIVLEVALGQRDKIVIFGDDYDTPDGTC 227 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 VRD+++V D +A L L G R YN+ GN + ++ V + + H Sbjct: 228 VRDYVHVLDLAQAHVLALNALDNGSRVYNL-GNGKGYSVREVIKTAR-------RVTGHE 279 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + RPG S KI+ E+GW P+ + Sbjct: 280 IPVEEGAPRPGDPPVLIASSDKIREELGWAPEHS 313 >gi|163852961|ref|YP_001641004.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163664566|gb|ABY31933.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 352 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 150/354 (42%), Gaps = 59/354 (16%) Query: 3 LIVTGGAGFIG-SALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFSF 54 ++VTG AGFIG CR L V+ +D LT A L L+E+ F+ Sbjct: 7 ILVTGAAGFIGFHVACRLLRAGRP--VVGVDSLTPYYDISLKAARLARLEELPG---FTS 61 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ D+ D E R + P+ +V+ AA+ V RSI+ ++T+N++ +LE Sbjct: 62 VRADLADAEATREIFARYAPEQVVHLAAQPGVRRSIVEPSPYVTSNVVAFLNVLE----- 116 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 C K S+ VYG K F+E D +P + Y+ATK +++ + A+ H Sbjct: 117 -GCRHGGVK---HLAYASSSSVYGGNGKLPFAERDGVDHPVNLYAATKKANELMAHAYSH 172 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + + G + + G+ RD+ YV+D + Sbjct: 173 LYDLPATGLRFFTVYGPWGRPDMAVYTFTDAIARGRPIEVANGGRVWRDFTYVDDVAEGV 232 Query: 234 YLVLKK------------------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VL + YNIG N+R E+ L+ ALI Sbjct: 233 VRVLDRPARPDPTWDPLRPDPATSAAPHRVYNIG--NDRPE-----ELNRLV-ALI---- 280 Query: 276 SHTELIRFIE--DR---PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L R E DR PG D S ++ ++G+ P +E G+ + V WY Sbjct: 281 -EGALGRRAERVDRPLPPGDILETRADVSDLRRDVGFAPATPLEIGVERFVAWY 333 >gi|217076811|ref|YP_002334527.1| UDP-glucose 4-epimerase [Thermosipho africanus TCF52B] gi|217036664|gb|ACJ75186.1| UDP-glucose 4-epimerase [Thermosipho africanus TCF52B] Length = 324 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 54/348 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS +C+ ++ + V+VID L++ S + F+ DI Sbjct: 1 MTVLVAGGAGYIGSHVCK-MLRERGYDVVVIDNLSHGYK-------SFTRYGEFVLGDIS 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + K ++ DA+++F A V S++ +++ N+ T LL S L Sbjct: 53 DENLLDLVFKTYKIDAVMHFCAYIEVGESVVDPNKYYQNNVSNTLTLLN------SMLKH 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K F+ ST VYG + ED P P +PY +K + ++ + YG+ + Sbjct: 107 DVK---YFIFSSTAAVYGMPQRIPIKEDDPKMPINPYGKSKYMVEQILDDFDRAYGLKSI 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIE-GSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + + ++G DG +RD++ Sbjct: 164 RFRYFNAAGADESLEIGEAHEPETHLIPLILDAALSVRDSIKIFGTDYETKDGTCIRDFV 223 Query: 225 YVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +V D H++ L YL+ +K + +N+G + GF + +I K T Sbjct: 224 HVNDLADAHIKGLEYLISEKKT--DYFNLGSGS-----------GFSVREVIEKVKEVTN 270 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + ++ RPG D++K + +GW P+ ++E + W+ Sbjct: 271 VDFKVEEVDRRPGDPAYLIADNTKARKILGWEPKYDLEKIIQTAWNWH 318 >gi|193216179|ref|YP_001997378.1| NAD-dependent epimerase/dehydratase [Chloroherpeton thalassium ATCC 35110] gi|193089656|gb|ACF14931.1| NAD-dependent epimerase/dehydratase [Chloroherpeton thalassium ATCC 35110] Length = 318 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 29/262 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL--------F 52 +++TGGAGFIGS L L+ D +V ID YA +EI + N+ + Sbjct: 4 VLITGGAGFIGSHLVDSLLAD-NYKVTCIDNFDAFYA------REIKEKNIAPHRENPNY 56 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 L++DI D + A E D IV+ AA++ V SI + N+ GT +LE + Sbjct: 57 QLLELDIRDYASLEKAANEPY-DIIVHLAAKAGVRPSIQDPIAYQQVNVQGTQNMLELAK 115 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAW 171 K +F+ S+ VYG + ED P SPY+ATK S + L + Sbjct: 116 ---------KLGVKQFVFASSSSVYGVNPNVPWREDDHVLMPISPYAATKVSGELLGHVY 166 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H YGI + +GP P+ I RM+EG+ + ++GDG RD+ Y++D ++ Sbjct: 167 SHLYGIRFIALRFFTVFGPRQRPDLAIHKFSKRMLEGTPIQVFGDGTTRRDYTYIDDIIQ 226 Query: 232 ALYLVLK-KGRIGERYNIGGNN 252 + + + + E N+G N Sbjct: 227 GIRKAMAYEASLFEVINLGNNT 248 >gi|312866097|ref|ZP_07726318.1| UDP-glucose 4-epimerase [Streptococcus downei F0415] gi|311098501|gb|EFQ56724.1| UDP-glucose 4-epimerase [Streptococcus downei F0415] Length = 333 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 54/350 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + YLV + +V+V+D L G+ ++ ++ F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDYLVQKGQEEVVVVDSLV-TGHRAAVHPAAK-----FYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+ +R E P DA+++FAA S V S+ ++ N G LLE Sbjct: 55 DQTFMRQVFSE-NPDLDAVIHFAAFSLVAESMEKPLKYFDNNTAGMIKLLEVM------- 106 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++F I ST YG ++ E P P +PY +K + ++ Y Sbjct: 107 -----NEFNIKHIVFSSTAATYGIPEEIPIKETTPQKPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GIP--------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQ 218 GI V + + G H PE L+P+ I ++ +G + ++G DG Sbjct: 162 GIKFVSLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGDDYKTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 NVRD+++ D A L L++G +N+G N+ I+ + IP Sbjct: 221 NVRDYVHPFDLASAHLLALDYLRQGNPSTAFNLGSATGFSNLQILEAARKVTGKEIPAEK 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG DS+K + +GW P+ +N+E + W+ Sbjct: 281 A--------DRRPGDPDTLVADSTKAREVLGWAPEFDNIEKIITSAWAWH 322 >gi|25028369|ref|NP_738423.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259507426|ref|ZP_05750326.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|23493654|dbj|BAC18623.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259164991|gb|EEW49545.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] Length = 328 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 64/336 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V VID T GN ++ + + ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLVERGHDVTVIDNFT-TGNREAVPASA-----TLVEGDV- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ L D +V+FAA S V S+ ++ N++ + LL+ R Sbjct: 53 -RDVADEVLAAGGFDGVVHFAARSLVGESVDHPADYWQHNMVTSLTLLDAMR-------A 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D F ST YG ++ +EDMP P++PY A+K + DY + ++ YG+ Sbjct: 105 HGVDNLVFS--STAATYGEPEQVPITEDMPTAPTNPYGASKLAIDYAITSYARAYGLGAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + +F++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVLQVALGHREKIFMFGDDWPTADGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D A L L+ N+GG + +F +G YS +++ + Sbjct: 223 HDLAEAHVLALES-------NVGGTHR------IFNLGS------GDGYSVRQVVEMCRE 263 Query: 287 RPGH-------DRRYA------IDSSKIKSEIGWFP 309 GH RR S K + E+GW P Sbjct: 264 VTGHPIPAEVAPRRAGDPAVLIASSEKAQRELGWNP 299 >gi|313496868|gb|ADR58234.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida BIRD-1] Length = 310 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 29/323 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS LC L+ D V ++D + G ++L ++ L ++ D+ D Sbjct: 6 ILITGGAGFIGSHLCDALL-DKGYAVRILDDFS-TGRRSNL-QVDHPRL-ELIEGDVADA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + A+V+ AA + V S+ +N IGT + E R+ Sbjct: 62 GLVTQAAAGCR--AVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHG------- 112 Query: 123 KDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+ VYG+ +G SED P P +PY+ K +S+ + + +G+ ++ Sbjct: 113 --LRRVLFASSAAVYGNNGEGESISEDTPKAPLTPYAVDKLASEQYLDFYRRQHGLEPVV 170 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +I + R ++G + ++GDG+ RD+LYV D V+ + L Sbjct: 171 FRFFNIFGPRQDPSSPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQAL 230 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ ++ E NIG N ++ +G ++ +L SY+ R G R Sbjct: 231 EQPQVEEGAVNIGLNQATSLNQLLAALGKVVGSLPAISYAAA--------RSGDIRHSRA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 D+ ++ + + M GL K Sbjct: 283 DNQRLLARFEFVQVTPMVEGLAK 305 >gi|118412460|gb|ABK81663.1| WbtF [Francisella novicida U112] Length = 328 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 27/328 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC L++ +V +D L+ G+ ++++ ++ + F++ DI D Sbjct: 18 FLVTGGAGFIGSNLCEVLLSK-GYRVRCLDDLS-NGHYHNVEPFLTNSNYEFIKGDIRDL 75 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + D +++ AA V RSI + N+ GT +LE R + Sbjct: 76 DTCMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------Q 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 125 NNVKKFVYASSSSVYGDEPNLPKKEGREGNILSPYAFTKKANEERARLYTKLYGLDTYGL 184 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 185 RYFNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACL 244 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + GE +NI ID+ + L DAL K + F DR G + Sbjct: 245 ADSKYAGEAFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNA 296 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK ++ +G+ P+ + E G+ V WY Sbjct: 297 DISKARNMLGYNPEYDFELGIKHAVEWY 324 >gi|328767043|gb|EGF77094.1| hypothetical protein BATDEDRAFT_36100 [Batrachochytrium dendrobatidis JAM81] Length = 330 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 46/331 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS L R + K QV V D L+ G+ ++ + +Q DI Sbjct: 1 MKVLVCGGAGYIGSHLVREITKLPKYQVAVFDNLS-KGHAAAVPATTL-----LIQGDIR 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E + A F+PDA+ +F A V S + ++ N+ GT LL+ + Sbjct: 55 NKEDLEKAFTSFKPDAVFHFCASIEVGESCIDPLKYYENNVSGTITLLQ---------AM 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL----AWGHTYG 176 K F+ ST ++G D+ E P +PY TK + + ++ AWG Sbjct: 106 QKHGTKYFVFSSTAALFGMPDRVPIHEFDATVPKNPYGDTKLAVETILKWCDEAWGLKNV 165 Query: 177 IPVLLSNC----SNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDW 223 + C S + G H PE LIP+ + ++ G VF+ G DG VRD+ Sbjct: 166 CLRYFNACGADASGDIGEDHQPESHLIPI-VLQVPRGKREKVFINGNDYNTHDGTCVRDY 224 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D H++AL +LK +++N+G +I+ + IP Sbjct: 225 VHVTDLATAHIKALEHMLKT-NTSDKFNLGSGKGYSVKEIIEAARKVTGHPIPAD----- 278 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 F E RPG S + + +GW Q Sbjct: 279 ---FAERRPGDPDTLIAASERAEQILGWKRQ 306 >gi|298491212|ref|YP_003721389.1| UDP-glucose 4-epimerase ['Nostoc azollae' 0708] gi|298233130|gb|ADI64266.1| UDP-glucose 4-epimerase ['Nostoc azollae' 0708] Length = 332 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 43/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS LV QV+++D L Y G+ + ++++ Q L ++ DI DR Sbjct: 8 ILVTGGAGYIGSHTVLALVQ-AGYQVIILDNLVY-GHRDLVEQVLQVKL---IEGDIEDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + +A+++F+A ++V S+ D++ N++GT LLE + L+ Sbjct: 63 SLLDNLFQTDNIEAVMHFSAYTYVGESVTNPDKYYRNNVLGTLTLLE------AMLAASI 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K +F+ ST YG +E P NP +PY TK + ++ + YG+ + Sbjct: 117 K---KFVFSSTCATYGVPQFIPLTEHHPQNPINPYGITKLMVEQILSDFDVAYGLKSVRF 173 Query: 183 NCSNNYGP--------YHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 N G H PE LIPL + T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGADPRGLLGEDHNPESHLIPLVLMTALGKRESISIFGTDYPTPDGTCIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D H+ L +LK G +N+G N +++ + IP ++ Sbjct: 234 SDLADAHILGLEYLLKDGE-SAVFNLGNGNAFSVREVIAAAEEVTGITIP--------VQ 284 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFP 309 + RPG S K K+ +GW P Sbjct: 285 ECDRRPGDSPILIGTSEKAKNLLGWKP 311 >gi|322433862|ref|YP_004216074.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX9] gi|321161589|gb|ADW67294.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX9] Length = 324 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 138/329 (41%), Gaps = 30/329 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG AGFIGS L LV V +D L+ G+L +L +I F Q D+ D Sbjct: 5 LITGIAGFIGSHLAHALVRRGD-SVRGLDNLS-TGSLANLSDIIPG--IDFRQADLRDAA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A + D I++ A V RS+ +NI GTF LLE R Sbjct: 61 AVEEACQGI--DYILHQGALPSVPRSVKDPRTSHESNIDGTFNLLEGAR---------AA 109 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R + ++ YG+ E M P +PY K + + + ++ YG+ + Sbjct: 110 GVKRVVYAASSSAYGNQPGFPRRETMVPQPIAPYPVQKLTGELYMRSYWQVYGLETVCLR 169 Query: 184 CSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP P+ ++ I +M+ G + GDG+ RD+ YV++ V A L Sbjct: 170 YFNIFGPGQTPDSPYSGVMARFILQMMRGEQPVINGDGEQGRDFTYVDNAVEANLKALTA 229 Query: 240 GR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G +N+ ER ++ + I L L+ H ++ +R G R Sbjct: 230 PAEKVAGRVFNVA-TGERHTLNETYSI---LAGLL----GHEAPPQYGPERSGDIRDSLA 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D S + + PQ E GL +TV WY+ Sbjct: 282 DISAAQEAFAYAPQVGFEEGLRRTVAWYV 310 >gi|194334317|ref|YP_002016177.1| NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] gi|194312135|gb|ACF46530.1| NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] Length = 341 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 41/346 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQV 57 +++VTG AGFIG + R L+ + +V+ ID L A L+E+ F F+++ Sbjct: 3 KILVTGAAGFIGFHVSRRLL-ERGDEVVGIDNLNSYYDVALKEARLEELEPFGQFRFIRM 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + D +VN AA++ V S+ +I +NI G +LE R Sbjct: 62 DLADREAMEDLFAIEKFDYVVNLAAQAGVRYSLQNPHAYIDSNIQGFINILEGCR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ + FS D +P S Y+ATK +++ + + H Y Sbjct: 117 ----HNHVGHLVYASSSSVYGANETMPFSVHDNVDHPLSLYAATKKANELMAHTYSHLYQ 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + L ++EG + ++ G++ RD+ +++D + Sbjct: 173 IPTTGLRFFTVYGPWGRPDMALFLFTKAIVEGKPIKVFNYGKHRRDFTFIDDITEGVIRT 232 Query: 237 LK-----------------KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 L R R YNIG + +D + DAL + T Sbjct: 233 LDHVAAPNPEWSGLSPDPGSSRAPWRVYNIGNSKPVNLMDYI-------DAL-ERELGKT 284 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D ++ ++ + P+ + G+ + V WY Sbjct: 285 AEKEFLPMQPGDVPDTYADVDQLIQDVDYQPKTPVAEGIGRFVEWY 330 >gi|261403713|ref|YP_003247937.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] gi|261370706|gb|ACX73455.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] Length = 304 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 32/325 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ + V+++D LT GN N++ ++ F+ DI ++ Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN-NYDVIILDNLT-TGNKNNINPKAE-----FVNADIRNK 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + + +++ AA+ +V S+ NI+GT +LE R K Sbjct: 55 D-LDEKINFKDVEVVIHQAAQINVRNSVENPVYDADVNILGTINILEMMR---------K 104 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D + + S+ VYG + E+ P NP SPY +K + + + YG + Sbjct: 105 YDINKIIFASSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIQLYNRLYGTEYAI 164 Query: 182 SNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 SN YG P +I + I +M++ ++GDG RD++YV D +A + L Sbjct: 165 LRYSNVYGERQDPRGEAGVISIFIDKMLKNQRPIIFGDGNQTRDFVYVGDVAKANLMALN 224 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 E NIG E V E L +I ++ + + R G R +D Sbjct: 225 WKN--EVVNIGTGKETS----VNE----LYKVIANELNYNNKPIYDKPREGEVYRIFLDV 274 Query: 299 SKIKSEIGWFPQENMESGLNKTVCW 323 K ++ +GW P +++ G+ K + W Sbjct: 275 KKAQN-LGWVPDVDLKEGIKKVINW 298 >gi|325278883|ref|YP_004251425.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] gi|324310692|gb|ADY31245.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] Length = 351 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 157/363 (43%), Gaps = 58/363 (15%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAGNLNS------ 42 M+++VTG AGFIGS + + L +ND L +L G + Sbjct: 1 MKILVTGAAGFIGSYVVQRLLERGDEVVGLDNINDYYEVELKYGRLAECGIVKEEVGWYK 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L + + + F+++++ D + + + + + AA++ V SI +I +NI Sbjct: 61 LVQSRKWPAYRFIRMNLEDSQAMEMLFVNERFGRVCHLAAQAGVRYSITNPRAYIESNID 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATK 161 G F +LE C ++ + F S+ VYG K FSE D +P S Y+A+K Sbjct: 121 GFFNVLE-------CCRWNRVEHLVFA--SSSSVYGLNGKVPFSEKDSIAHPVSLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ H YGIPV YGP+ P+ L ++ V ++ G +R Sbjct: 172 KSNELMAHAYSHLYGIPVTGLRFFTVYGPWGRPDMSPFLFADAVLHDRPVKVFNQGDMLR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVF 261 D+ Y++D + + R+ E YNIG + + +D + Sbjct: 232 DFTYIDDIAEGVIRCID--RVAEPDPAWNAECPDPACSSAPYRIYNIGNSEPVRLMDFI- 288 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 A + + + ++ +PG + D+S ++ ++G+ P +++ G+ +TV Sbjct: 289 -------AAVEAACEKEAVKEYLPMQPGDVYQTNADTSALQRDMGYKPSKDIREGIRETV 341 Query: 322 CWY 324 W+ Sbjct: 342 AWF 344 >gi|163849955|ref|YP_001637998.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661560|gb|ABY28927.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 388 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 75/374 (20%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVL--VIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIG L L+ D +++VL +I+++ AG + + S F++ D+ Sbjct: 23 VLITGGAGFIGRHLASALIARDYRVRVLDSLIEQVHGAGGGPAALDPS----VEFVEGDV 78 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E + AL + +V+ AAE V +S+ + +++ N GT +L + + + Sbjct: 79 RDGEAVARALDDVT--HVVHLAAEVGVGQSMYAVERYVSVNDCGTAVLFQ------AMIE 130 Query: 120 QDKKDQFRFLQISTDEVYGS----LDKGLFSEDM---------PYNP------------- 153 K R + S+ +YG + G ED P++P Sbjct: 131 APVK---RVVVASSMSIYGEGLYRTEGGALVEDAVRKARKPGEPWDPLGADGHPLRPVPT 187 Query: 154 --------SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLA 201 +S Y+ TK + L L YG+ + N YGP ++ + Sbjct: 188 PETKRPALASVYALTKYMQERLTLTLAPAYGMEGVALRLWNAYGPGQALSNPYTGVLAIF 247 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIV 260 R++ G ++ DG+ RD+++VED +A L L+ +G+ YN+G +R V Sbjct: 248 AARLLNGQPPMIFEDGEQRRDFVHVEDVAQAFVLALEHPAAVGQVYNVGSGQDRT----V 303 Query: 261 FEIGFLL------DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 E+ LL + + P++ L G R D KI E+G+ P+ + Sbjct: 304 NEVARLLARAMGREDIAPQTTGQARL--------GDIRHCIADIGKITRELGYAPKRDFA 355 Query: 315 SGLNKTVCWYLDNN 328 GL + W + Sbjct: 356 EGLAELAAWVAEQQ 369 >gi|118463300|ref|YP_883234.1| UDP-glucuronic acid decarboxylase 1 [Mycobacterium avium 104] gi|118164587|gb|ABK65484.1| UDP-glucuronic acid decarboxylase 1 [Mycobacterium avium 104] Length = 361 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 140/337 (41%), Gaps = 40/337 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+G+ LC L++D ++V+ +D L+ +G + + F+Q D+CD Sbjct: 34 RVLITGGAGFLGAHLCARLLDD-GVEVVSVDDLSTSGPAVRFGDRPG---YRFVQRDVCD 89 Query: 62 RECIRSALKEFQPDAIVNFA-AESHVD---RSILGADEFITTNIIGTFILLEETRLWWSC 117 I F DA+ + A A S VD R I + + T GT LE Sbjct: 90 PGLIDEVGSGF--DAVFHLASAASPVDYQRRPI----QTLRTGSAGTATALEIA------ 137 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWG 172 ++ RF+ ST EVYG + E P P S Y K ++ L A+ Sbjct: 138 ----ERAGARFVLASTSEVYGDPESHPQRESYWGNVNPVGPRSVYDEAKRYAEALTFAYH 193 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 V ++ N YGP + +++P + + G + + G G R YV+D + Sbjct: 194 RLGRADVGVARIFNTYGPGMRADDGRMVPTFCLQALRGDPLTVSGTGLQTRSLCYVDDTI 253 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L + L NIG E + LI + T I+F Sbjct: 254 TGL-IALAHSDFAGPVNIGNPTELTVLSAA--------ELIRELAGSTSTIQFTPPATDD 304 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R D + +GW P+ + +GL+ T+ W+ + Sbjct: 305 PQRRCPDIRLARQRLGWRPRVDYRTGLSTTLAWFAER 341 >gi|282900836|ref|ZP_06308775.1| dTDP-glucose 4-6-dehydratase [Cylindrospermopsis raciborskii CS-505] gi|281194291|gb|EFA69249.1| dTDP-glucose 4-6-dehydratase [Cylindrospermopsis raciborskii CS-505] Length = 219 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 D + + ST EVYG +E+ P SPYSA+K +D + +++ ++ P+ + Sbjct: 2 DLEKVVHTSTSEVYGIAKFVPITEEHPLQGQSPYSASKIGADQIAMSFYQSFNTPISIIR 61 Query: 184 CSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-I 242 N YGP +IP IT++ G G RD+ YV+D VR + + + I Sbjct: 62 PFNTYGPRQSARAVIPTVITQIANGIRKIRLGALHPTRDFNYVKDTVRGFIAIAESEKSI 121 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIK 302 GE NIG N E I I + + +A+ + T+ +R + +R +A D++K K Sbjct: 122 GEVINIGSNFE---ISIGDTVKLIAEAMGVEIEIETDEVRLRPQKSEVNRLWA-DNTKAK 177 Query: 303 SEIGWFP----QENMESGLNKTVCWYLD 326 +GW P +E + GL +T W+++ Sbjct: 178 QLVGWEPLYGGREGFKQGLAETAEWFMN 205 >gi|326486400|gb|ADZ76230.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 357 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRIGIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 80 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRI---LKAKD 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 137 GYDPVVHI-CSSSEVYGKAKVGIKLNEETAFHGASPYSISKIGADYLGRFYGEAYNIRTF 195 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 196 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 254 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG++ GE +NI G F++ ++D L+ +S + I+ +D Sbjct: 255 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILL--GFSIRKDIKVEQDEQR 305 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 306 LRPIDADYQMFDNTKIKSFINWKPE 330 >gi|221639947|ref|YP_002526209.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides KD131] gi|221160728|gb|ACM01708.1| NAD-dependent epimerase/dehydratase precursor [Rhodobacter sphaeroides KD131] Length = 337 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +VL +D G++ +++ + F ++ D+ Sbjct: 10 ILVAGGAGFVGSHLCEALLRQGH-RVLCLDSF-LTGSMENVQALCTFRDFRLIRQDVV-- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E IR L E + + N A+ + + + TN++GT LL + + Sbjct: 66 EPIR--LSETV-ERVYNLASPASPPQYQADPVHTMMTNVVGTGNLL----------ALAE 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYGI 177 RFLQ ST EVYG + ED N S + Y K +++ L + Sbjct: 113 AHGARFLQASTSEVYGDPEIHPQPEDYRGNVSCTGSRACYDEGKRAAETLCFDYSRRARA 172 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP+ P+ +++ + + + G + +YG G+ R + YV D V L Sbjct: 173 DVRVARIFNTYGPHMRPDDGRIVSNLLVQALRGEPLTVYGTGEQTRSFCYVSDLVAGLMA 232 Query: 236 VLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDR 292 +++ + N+G E + E+ L+ +++P + H L ED P R Sbjct: 233 LMEAEETPDGAVNLGNPGE----FTIAELAALVQSVVPTAAGVVHRPLP---EDDP---R 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + K +GW PQ + GL +T W+ Sbjct: 283 RRRPDIGRAKRLLGWEPQVPLSEGLPETAAWF 314 >gi|150400821|ref|YP_001324587.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] gi|150013524|gb|ABR55975.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] Length = 341 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 151/351 (43%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGG GF+GS L +N + +++D G + + + F+ DI Sbjct: 1 MKILITGGLGFLGSNLSHESINR-GYETIIMDNFFREGTTLNYNWLKEQGDFTLENKDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I +K+++PD + + A + + S+ N +GTF LLE R + Sbjct: 60 QWYDIEEMIKKYKPDVVFHTAGQVAMTTSLNNPRLDFEVNALGTFNLLEAIRKY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 + L ST++VYG L+ F E++ + SPY +K ++ Sbjct: 114 --SPETMVLFSSTNKVYGDLEYIKYVEKETRYIAPDYPNGFDENLCLDFHSPYGCSKGTA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK-------LIPLAI---TRMIEGSHVFLY 214 D +L + +GI ++ S+ YG F + A+ + IEG V ++ Sbjct: 172 DQYLLDYNRMFGIKTVVFRHSSMYGGRQFATYDQGWIGWFVKEALRIKSGEIEG--VEIH 229 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G+G+ VRD L+ +D V + ++ GE +NIGG ++ ++ GFL D L Sbjct: 230 GNGKQVRDVLHADDMVNLYFKTVENIDKCAGEAFNIGG-GMNNSLSLLELFGFLEDEL-- 286 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 S I R + + D KI GW P+ + E GL K + W Sbjct: 287 ---SINININKKPWRCSDQKVFVADVGKINKYAGWKPKISKEEGLRKMIKW 334 >gi|332705483|ref|ZP_08425561.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] gi|332355843|gb|EGJ35305.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] Length = 316 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 141/330 (42%), Gaps = 39/330 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + +V+ +D N LK ++ F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLMAEGH-EVICLDNFYTGHKRNILKWLAHP-YFELVRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D I + A + + I TN++GT + L Sbjct: 59 --EPIR-----LEVDQIYHLACPASPVHYQYNPVKTIKTNVMGTLYM----------LGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R L ST EVYG D SED P S Y K ++ L + Sbjct: 102 AKRVKARLLLASTSEVYGDPDVHPQSEDYRGNVNPIGIRSCYDEGKRVAETLAFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + ++ N YGP +++ + + ++G + +YGDG R + YV D V L Sbjct: 162 GVDIRVARIFNTYGPRMLENDGRVVSNFVVQALKGEALTVYGDGSQTRSFCYVSDLVEGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ G N+G E + I L A+ TE+I +D P Sbjct: 222 IRLMNNDHTGP-INLGNPGE-------YTILELAQAIQKMVNPDTEIIFKPLPQDDP--- 270 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RR D SK K+ +GW P + GL+ TV Sbjct: 271 RRRQPDISKAKTLLGWEPTITLSEGLDFTV 300 >gi|224418039|ref|ZP_03656045.1| putative UDP-glucuronic acid epimerase [Helicobacter canadensis MIT 98-5491] gi|253827370|ref|ZP_04870255.1| NAD-dependent epimerase/dehydratase family protein [Helicobacter canadensis MIT 98-5491] gi|313141577|ref|ZP_07803770.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510776|gb|EES89435.1| NAD-dependent epimerase/dehydratase family protein [Helicobacter canadensis MIT 98-5491] gi|313130608|gb|EFR48225.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 350 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 66/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG------NLNS 42 M+++VTG AGFIGS L L +ND + +L AG + N+ Sbjct: 1 MKILVTGTAGFIGSFLALRLLQRGDEVIGLDCINDYYDVRIKYGRLKNAGISQEKISYNT 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L + + + F+ + + DRE + S K + D + N AA++ V S++ +I +NI+ Sbjct: 61 LIQSEKYPNYRFINLKLEDRENLFSLFKNEKFDKVCNLAAQAGVRYSLVNPYAYIDSNIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSS 155 G +LE +C + K S+ VYG +E MP+ +P S Sbjct: 121 GFVNILE------ACRHHNIK---HLAYASSSSVYG------LNESMPFSTSDNVDHPIS 165 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + + + + +P YGP+ P+ + L ++EG + ++ Sbjct: 166 LYAASKKSNELMAHTYSYLFNLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKAIDVFN 225 Query: 216 DGQNVRDWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNNERKNI 257 G+ +RD+ Y++D V + V+ G+ + YNIG NN K + Sbjct: 226 HGEMLRDFTYIDDIVEGVVRVIDNIPTPNPQWNGKNPDPHSSKAPYKIYNIGNNNPIKLM 285 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + I K + +PG + + SE+ + P ++++G+ Sbjct: 286 DFI--------EAIEKEVGKVAKKNMLPLQPGDVPATYANVDDLVSELNYKPNTSIQTGI 337 Query: 318 NKTVCWY 324 V WY Sbjct: 338 KNFVKWY 344 >gi|94970124|ref|YP_592172.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] gi|94552174|gb|ABF42098.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter versatilis Ellin345] Length = 322 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 145/336 (43%), Gaps = 47/336 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDICD 61 +VTG AGFIG ++ + L+ V ID + GNL L+ + F++ DI D Sbjct: 5 LVTGAAGFIGRSIAQQLLAG-GAAVRGIDNFSTGKRGNLVGLEGME------FIEGDITD 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLS 119 + A + + + AA + V RS+ AD T N+ GT LL+ + Sbjct: 58 PAAVGRACDGVE--VVFHEAALASVPRSV--ADPLATNHANVTGTLQLLQ---------A 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + + YG +E+M NP SPY+ +K + +Y + + +G+ Sbjct: 105 AHRAGVRRVIYAGSSSAYGDTPTLPKNEEMLANPISPYAVSKLTGEYYLRSMYAVHGMET 164 Query: 180 LLSNCSNNYGPYHFP--------EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + N +GPY P K IP +M+ G ++GDG+ RD+ Y+E+ V+ Sbjct: 165 VTIRYFNVFGPYQDPGSQYSGVLAKFIP----QMLRGETPTIHGDGEQSRDFTYIENVVK 220 Query: 232 ---ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 AL + GE +N+ + V AL+ + +T + +R Sbjct: 221 ANIALANAPAERVAGEVFNVATGTRISLNETV--------ALLREMTGYTGAVHHGPERK 272 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G + D SK K G+ P +GL++TV WY Sbjct: 273 GDVKHSLADISKAKRAFGFEPTVMFPAGLHRTVEWY 308 >gi|322379886|ref|ZP_08054172.1| GDP-D-mannose dehydratase (rfbD) [Helicobacter suis HS5] gi|321147681|gb|EFX42295.1| GDP-D-mannose dehydratase (rfbD) [Helicobacter suis HS5] Length = 367 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 17/243 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G GS L R+L+ DL +V I + + + N + +++ S+ FL D Sbjct: 6 LITGITGQDGSYLARHLL-DLGYEVHGIKRRSSSFNTARIDLIYEDVHSSHTHFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I S L + +P I N AA+SHV S + + +GT +LE R Sbjct: 65 LTDSSNITSLLAKIRPTEIYNLAAQSHVQVSFKMPEYTANVDALGTLRILEAMRFLG--- 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KD RF Q ST E+YG + + +E+ P+NP SPY+ K + Y+ + YG Sbjct: 122 ---LKDT-RFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKLYAYYITKNYREAYGFF 177 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 + N+ P F + I +AI+RM+ G LY G+ RD+ + D+V+A+ Sbjct: 178 AVNGILFNHESPVRGETFVTRKITMAISRMLFGLQDCLYLGNLDAKRDYGHALDYVKAMR 237 Query: 235 LVL 237 L+L Sbjct: 238 LIL 240 >gi|120434517|ref|YP_860213.1| CapI-like UDP-glucuronic acid epimerase [Gramella forsetii KT0803] gi|117576667|emb|CAL65136.1| CapI-like UDP-glucuronic acid epimerase [Gramella forsetii KT0803] Length = 338 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 158/347 (45%), Gaps = 38/347 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEI----SQSNLF 52 M+++VTG AGFIG LC LV + +V+ +D + Y+ +L LKE+ +SN F Sbjct: 1 MKILVTGAAGFIGFHLCEKLVKE-NHEVIGLDNINDYYSQDLKLARLKELGIKSKESNKF 59 Query: 53 ------------SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 SF ++++ DR+ + K+ D + N AA++ V S+ + +I +N Sbjct: 60 NSKCLSTIYPNFSFFRMNLEDRDSLPELFKKENFDIVCNLAAQAGVRYSLENPEAYIDSN 119 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSA 159 ++G ++E C + K + S+ VYG K FS +D P S Y+A Sbjct: 120 LVGFANIIE------CCRNHHIK---HLIYASSSSVYGQNKKIPFSTDDRVDEPISLYAA 170 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN 219 TK S++ + + H Y +P YGP+ P+ + L + G + ++ +G Sbjct: 171 TKRSNEIMAYTYSHLYKLPTTGLRFFTVYGPWGRPDMAMFLFADAITNGKVLKVFNEGNL 230 Query: 220 VRDWLYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+ +V+D V + V+ + +YN+ K I+++ I + D L Sbjct: 231 ERDFTFVDDIVNGVMAVVNRVPSEKDSKYNLFNIGNSKPINLLNFIKEIEDQL-----GL 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + +PG + DS + + P ++ G+ K + W+ Sbjct: 286 SAEKQLMPMQPGDVDKTWADSKPLMENFDYQPSIEIKEGVQKYLQWF 332 >gi|328954206|ref|YP_004371540.1| UDP-glucose 4-epimerase [Desulfobacca acetoxidans DSM 11109] gi|328454530|gb|AEB10359.1| UDP-glucose 4-epimerase [Desulfobacca acetoxidans DSM 11109] Length = 312 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 143/323 (44%), Gaps = 28/323 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS + + +V ++D L+ G +++ +Q F DI Sbjct: 5 RILVTGGAGFIGSHVAESFLAAGH-EVAIVDNLS-TGRQDNVPVGAQ-----FYPFDIKS 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E ++ +QP +V+ AA+ V S+ NI+G+ L E Q Sbjct: 58 WETF-DFIRHWQPQVLVHHAAQMSVRISVDDPVRDAQENILGSLNLFE-------AAVQG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K ++ F + +YG E+ P PY K + ++ + + +G+ + Sbjct: 110 KVEKIIFAS-TGGAMYGDQAPVPAGEEDRATPECPYGIAKLAVEHYMHFYHREHGVIPIR 168 Query: 182 SNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N YGP ++ + I + + + GDG RD++YV D V A L L+ Sbjct: 169 LRYANVYGPRQNGLGEAGVVAIFIEKFLAQEQPVINGDGLQTRDFVYVGDIVAANLLALE 228 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G +NIG E + I ++ +L + + T +PG RR A+DS Sbjct: 229 YSQAGT-FNIGTGGETDILTIYLKLQEILGSKKGPVHGPT--------KPGEQRRSALDS 279 Query: 299 SKIKSEIGWFPQENMESGLNKTV 321 + E+GW P+ N+ GL +TV Sbjct: 280 TLAHKELGWRPRINLVEGLTRTV 302 >gi|322389795|ref|ZP_08063340.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 903] gi|321143519|gb|EFX38952.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 903] Length = 332 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LVN+ + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLV-TGHRAAVHPDA-----VFYQGDLA 54 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWS 116 D++ +R+ KE DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRTVFKEHADIDAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYI 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S ST YG ++ E P P +PY +K + ++ YG Sbjct: 115 VFS------------STAATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYG 162 Query: 177 I---PVLLSNCS-----NNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQN 219 I P+ N + + G H PE L+P+ + ++ +G + ++G DG N Sbjct: 163 IKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKISIFGDDYKTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ IV K Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQIV--------EAARKVTG 273 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 H + + RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 274 HPIPLELADRRPGDPDTLIASSEKARAILGWQPKFDNIETIIQTAWAWH 322 >gi|216263650|ref|ZP_03435645.1| WbnF [Borrelia afzelii ACA-1] gi|215980494|gb|EEC21315.1| WbnF [Borrelia afzelii ACA-1] Length = 355 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 159/367 (43%), Gaps = 64/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV DLK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDILNDYYDLKFKHERLEALGFCSKGVKTDK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSS 155 G F +L+ R+ K++ F+ ST VYG +E++P N P + Sbjct: 121 GFFNVLDVCRVC-------KENIKHFVYASTSSVYG------INENIPSNEDSSTDHPLN 167 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + A+ ++ IP YG Y P+ + L + G + ++ Sbjct: 168 LYAASKKSNEMIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGESINIFN 227 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNI 257 +G RD+ YV D +Y VLK + YNIG + K + Sbjct: 228 NGNMARDFTYVSDIANGVYKVLKNPARSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLL 287 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + E+ D K+Y + +E D K+K+++G+ + +++ G+ Sbjct: 288 DFIEELEANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKISIKEGI 339 Query: 318 NKTVCWY 324 + WY Sbjct: 340 KEFSQWY 346 >gi|71279076|ref|YP_270850.1| GDP-mannose 4,6-dehydratase [Colwellia psychrerythraea 34H] gi|71144816|gb|AAZ25289.1| GDP-mannose 4,6-dehydratase [Colwellia psychrerythraea 34H] Length = 374 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 40/351 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 ++TG G GS L L+ + +V I + + + N + I Q N F D Sbjct: 8 LITGITGQDGSYLAELLL-EKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LK+ QPD + N A+SHV S + + IGT LLE R L Sbjct: 67 LTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + SE P++P SPY+ K + ++V+ + +YG+ Sbjct: 123 GLEKKT--KFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ +RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDALRDWGHAKDYVRMQW 240 Query: 235 LVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLD--ALIPKSYSHTELI 281 ++L++ +I R + + I++ F G LD A + K Sbjct: 241 MMLQQEHPDDFVIATGKQISVREFVTLSALEAGIELTFS-GEGLDEVARVTKIIGDNAPA 299 Query: 282 RFIED----------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + D RP D SK K ++GW PQ +E ++ V Sbjct: 300 LSVGDIMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQITVEEMCSEMVA 350 >gi|157841505|gb|ABV83220.1| CppDIII [Pseudonocardia autotrophica] Length = 344 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 20/274 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQ-SNLFSFLQVDI 59 R ++TG G GS L +L++ QV + + G N K +S+ ++ F+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLSQ-GYQVWGLIR----GQANPRKTRVSRLASELEFVDGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ QPD + N A S V S A+ N G +LE R+ S LS Sbjct: 59 MDQASLVSAVDTVQPDEVYNLGAISFVPMSWQQAELVTEVNGTGVLRVLEAIRMV-SGLS 117 Query: 120 QDKK----DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + Q RF Q S+ E++G + E ++P SPY A KA Y+ + ++ Sbjct: 118 MSRTASPNGQIRFYQASSSEMFGKAAETPQRETTLFHPRSPYGAAKAYGHYITRNYRESF 177 Query: 176 GIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVR 231 G+ + N+ P F + I LA+ R+ G G+ VRDW Y D+VR Sbjct: 178 GMYAVSGMLFNHESPRRGQEFVTRKISLAVARIKLGLQRDLALGNLDAVRDWGYAGDYVR 237 Query: 232 ALYLVLKKGRIGERYNIGG---NNERKNIDIVFE 262 A++L+L++G + Y IG ++ R + I FE Sbjct: 238 AMHLMLQQGEPDD-YVIGTGQMHSVRDAVQIAFE 270 >gi|220926125|ref|YP_002501427.1| GDP-mannose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] gi|219950732|gb|ACL61124.1| GDP-mannose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] Length = 354 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 57/314 (18%) Query: 31 IDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSI 90 +D+L Y N L F D+ D + ++ QPD I N AA+SHV S Sbjct: 43 VDRLLYDATENGLP-------FYLHYGDLTDSTNLIRLVQSVQPDEIYNLAAQSHVAVSF 95 Query: 91 LGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP 150 + + +GT LLE R+ + D+ RF Q ST E+YG + + E P Sbjct: 96 ETPEYTANADAVGTLRLLEALRIL------NMTDKTRFYQASTSELYGKVQEIPQRETTP 149 Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 + P SPY A K + ++ + + YGI N+ PY E + ITR + H Sbjct: 150 FYPRSPYGAAKLYAYWITVNYREAYGIHASNGILFNHESPYR-GETFVTRKITRAVAKIH 208 Query: 211 -----VFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI---------- 248 L G+ ++RDW + D+V ++L+L++ + GE +++ Sbjct: 209 HGLQKKLLLGNLNSLRDWGHARDYVEGMWLMLQQEKGDDYVLATGEMHSVREFVELAFQQ 268 Query: 249 --------GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 G N E + +D G +L A+ P+ + TE+ I D +K Sbjct: 269 IGRSIFWRGKNVEEQGVDE--RTGEVLVAVDPRYFRPTEVDLLIG-----------DPTK 315 Query: 301 IKSEIGWFPQENME 314 + ++GW + + E Sbjct: 316 AREKLGWSHRTSFE 329 >gi|29346752|ref|NP_810255.1| putative UDP-glucuronic acid epimerase [Bacteroides thetaiotaomicron VPI-5482] gi|29338649|gb|AAO76449.1| putative UDP-glucuronic acid epimerase [Bacteroides thetaiotaomicron VPI-5482] Length = 353 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 89/364 (24%), Positives = 154/364 (42%), Gaps = 56/364 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSL----KEI--- 46 M+++VTG AGFIGS + L+ +V+ +D L G L +L EI Sbjct: 1 MKVLVTGAAGFIGSFTSKKLLEQGH-EVVGLDNLNDYYDTSLKYGRLANLGINKDEIGWY 59 Query: 47 -----SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 S F+F+++++ DR+ ++ D + N AA++ V SI +I +NI Sbjct: 60 KYTRSSYYTAFNFIRMNLEDRQAVQMLFANGDFDCVCNLAAQAGVRYSIENPYAYIESNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 G +LE R + S+ VYG FSE D +P S Y+A+ Sbjct: 120 DGFLNILEGCR---------NSKVSHLIYASSSSVYGLNGNVPFSEKDSIAHPVSLYAAS 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K + + + A+ H Y IP YGP+ P+ L ++ + ++ +G Sbjct: 171 KKADELMAHAYSHLYNIPTTGLRFFTVYGPWGRPDMSPFLFADAILHHRAIKVFNNGNMF 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFE 262 RD+ Y++D + + V++ IG + YNIG + K +D + Sbjct: 231 RDFTYIDDIIEGIIRVMQHVPIGNKNWKPENPSPDSSSAPYKIYNIGNSRPVKLMDFIQA 290 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 I + K Y + +PG + D + ++ + G+ P ++ G+ KT+ Sbjct: 291 IENAIGREAEKIY--------LPMQPGDVYQTYADITSLEHDTGFKPDTSLLEGVRKTID 342 Query: 323 WYLD 326 WY D Sbjct: 343 WYCD 346 >gi|114562552|ref|YP_750065.1| NAD-dependent epimerase/dehydratase [Shewanella frigidimarina NCIMB 400] gi|114333845|gb|ABI71227.1| NAD-dependent epimerase/dehydratase [Shewanella frigidimarina NCIMB 400] Length = 337 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 15/238 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L D +V+ +D L Y NL LK I + F F++ Sbjct: 1 MKYLVTGAAGFIGNFVAERLC-DQGHEVVGLDNLNDYYDPNLKLARLKRIEHFSSFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR I + + D +++ AA++ V SI ++ +N++G +LE R Sbjct: 60 MDIADRTAIAELFETEKFDRVIHLAAQAGVRYSIENPMAYVDSNLVGMATILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K Q + S+ VYG +K FS ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 ----HNKVQ-HLVYASSSSVYGMNEKMPFSTEDAVDHPVSLYAATKKANELMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +P YGP+ P+ L ++ + ++ G+ RD+ Y++D V + Sbjct: 171 NLPTTGLRFFTVYGPWGRPDMAPFLFTDAILNDREIKVFNHGKMKRDFTYIDDIVEGI 228 >gi|307596597|ref|YP_003902914.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307551798|gb|ADN51863.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 293 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 153/330 (46%), Gaps = 41/330 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTG +GF+G R +VN ++ K A L+ +K + + +DI Sbjct: 1 MKILVTGSSGFLG----RNIVNCMR------SKGHDARGLDIVKAETTDYI-----IDIT 45 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSIL--GADEFITTNIIGTFILLEETRLWWSCL 118 R+ + KE DAIV+ AA + RS GA + + N++GT +LE R+ + Sbjct: 46 RRDDVIGLSKE-GFDAIVHLAAYPN-PRSFTNAGALKGLDVNVVGTINMLELARILNA-- 101 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RFL ST VYG K +ED P P Y +K +++ + +++ + +P Sbjct: 102 --------RFLLYSTSNVYGKPTKLPVTEDDPLRPFEGYGWSKVAAEAVSMSYHVVHKVP 153 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + YGP+ ++ + ITR ++ + + G + D+LYVED A L L+ Sbjct: 154 VTIFRLWKPYGPHD--NGVVGIFITRALKNEDLVVNNGGVDTTDFLYVEDLCDATELALR 211 Query: 239 K-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 K +G+ +NIG E +D L +I K I ++ R R D Sbjct: 212 KDDAVGQAFNIGLGVETSILD--------LARIIVKLVGSNSKIN-VQPRTSEPFRSYPD 262 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK +G+ P+ ++ SGL T+ W+ N Sbjct: 263 VSKAMRILGFKPKYDLVSGLRATIDWFRRN 292 >gi|30018694|ref|NP_830325.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|296501270|ref|YP_003662970.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171] gi|29894235|gb|AAP07526.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579] gi|296322322|gb|ADH05250.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171] Length = 321 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L L+ +V V+D Y G KE+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELMRR-GYEVTVVDNF-YKGKNKYHKELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVD--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKS----IKEVAEVIKKLT-NSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E+GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLKELVQFQAKVTWENGLKETIKWFREQN 319 >gi|282898035|ref|ZP_06306030.1| GDP-mannose 4,6-dehydratase [Raphidiopsis brookii D9] gi|281197179|gb|EFA72080.1| GDP-mannose 4,6-dehydratase [Raphidiopsis brookii D9] Length = 359 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 21/323 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 + ++TG G GS L L+ +V I + T N + + I Q FL Sbjct: 6 KALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHIYEDPHQEGARFFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E +P I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVKPVEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAVRDY-- 122 Query: 117 CLSQDKKD-QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q++ Q RF Q + E+YG + SE P+ P SPY+ K + + + + +Y Sbjct: 123 ---QNRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTINYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ N+ P F + I A++R++ G LY G+ RDW Y +D+VR Sbjct: 180 GLFACNGILFNHESPRRGETFVTRKITRAVSRIVAGKQKKLYMGNLDAKRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++L+L+K + + + +E ++ ++ F L + Y + R++ RP Sbjct: 240 AMWLMLQKEQPDD--YVIATSETHSVREFLDLAFSYVNLKWEDYVEFDQ-RYL--RPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENME 314 D++K + ++ W P E Sbjct: 295 DLLIGDATKARQKLAWQPSVTFE 317 >gi|330468917|ref|YP_004406660.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris AB-18-032] gi|328811888|gb|AEB46060.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris AB-18-032] Length = 329 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 88/338 (26%), Positives = 142/338 (42%), Gaps = 30/338 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG GF+GS L LV +V V D ++ S+ + D+ D Sbjct: 5 RAVVTGGCGFLGSHLVERLVAQGD-EVTVFDAAPPPPEQRIARQHSR-----HVTGDVRD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +A++ D + + AA VD+ + + I N GT +LE Sbjct: 59 PEALAAAIRP-DVDVVYHLAAVVGVDQYLSRPLDVIDINFTGTRRVLERA---------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP--YNPSSP----YSATKASSDYLVLAWGHTY 175 + R + ST EV+G ++ED P++ YS +KA +++L A+ + Sbjct: 108 AEVGARVVVASTSEVFGRNPAVPWAEDAERVLGPTTADRWTYSTSKALAEHLTFAFVRQH 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 G+ + N YGP P ++ + R++ G LY G+ R + YV+D V L Sbjct: 168 GLAATVVRYFNAYGPRQRPAYVVSRTVHRVLNGRSPVLYDGGRQTRCFTYVDDAVTGTLA 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--ELIRFIEDRPGHDR 292 +GE +NIG E ++V I L + +P + T L ED Sbjct: 228 AAASADAVGEAFNIGSMTETTMAEVVAVILRLTASTVPVTEVDTAQRLGAAYEDL----S 283 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R D++K + + W +E GL + V W N W Sbjct: 284 RRIPDNAKARKVLNWSCDTPLEDGLRQLVAWARANPDW 321 >gi|161520317|ref|YP_001583744.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] gi|189353504|ref|YP_001949131.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] gi|160344367|gb|ABX17452.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] gi|189337526|dbj|BAG46595.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] Length = 329 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 142/345 (41%), Gaps = 47/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ VTGGAG+IGS C+ L V D T G+ ++++ + I Sbjct: 1 MKVFVTGGAGYIGSHTCKALAEAGHAPVAYDDLST--GHRDAVR------WGPLVVGSIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + AL +PD +++FAA ++V S+L D + TN+ GT LL R Sbjct: 53 DHDALGRALAAHRPDIVIHFAALAYVGESVLAPDRYYATNVTGTCTLLNAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-V 179 R + S+ YG D E P +P +PY TK + + + + YG+ V Sbjct: 105 -AAGVGRIVLSSSCATYGIPDALPICEHTPQHPINPYGFTKYAMERMAADFERAYGMQWV 163 Query: 180 LL-------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFLY-------GDGQNVRDWL 224 L ++ G H PE +PLAI + F DG VRD++ Sbjct: 164 ALRYFNAAGADPDGLLGENHEPETHALPLAIRAALGTGRPFTVMGTDYPTPDGSAVRDYV 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV+A + + G N+G +++V + + + +P + Sbjct: 224 HVSDLADAHVKATAYLCRGGH-SVALNLGTGTGTSVLELVRAVETVTGSRVPTVMA---- 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D++K +GW P+ +E + W+ Sbjct: 279 ----ARRPGDPPALYADATKAALVLGWRPRFAGIEPMVEHAARWF 319 >gi|319948424|ref|ZP_08022562.1| UDP-glucose 4-epimerase [Dietzia cinnamea P4] gi|319437906|gb|EFV92888.1| UDP-glucose 4-epimerase [Dietzia cinnamea P4] Length = 326 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 57/335 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++G +C ++ + +V+++D L+ GN + + E + +FL+ D+ Sbjct: 1 MKLLVTGGAGYVGG-VCATVLIERGHEVVILDDLS-TGNRDGVPEGA-----TFLEGDVA 53 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 R A + P D +++FAA S V S+ +E+ N++ + LL+ R Sbjct: 54 AR-----AGEVLDPSFDGVLHFAARSLVGESVEKPEEYWQGNVVTSLALLDAMR------ 102 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ST YG ++ +EDMP P++ Y ATK + D+ + ++ +G+ Sbjct: 103 ---AAGVGNLVFSSTAATYGEPEQVPITEDMPTRPTNTYGATKLAIDHAITSYAVAHGLA 159 Query: 179 VLLSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G YH LIPL + + H+ ++G DG +RD++ Sbjct: 160 ATSLRYFNVAGAYHGAGENRVVETHLIPLVLQVALGHRDHIKVFGDDWPTPDGTCIRDYI 219 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGF--LLDALIPKSYSH 277 +V D A L L+ G N+G G + R+ ID+ E+ + D + P+ Sbjct: 220 HVADLADAHLLALESNAPGVHRVLNLGSGEGFSVREVIDVCREVTGHPIPDVVAPR---- 275 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S++ +E+GW P Sbjct: 276 ---------RAGDPAVLVASSARAIAELGWNPTRT 301 >gi|295693280|ref|YP_003601890.1| udp-glucose 4-epimerase [Lactobacillus crispatus ST1] gi|295031386|emb|CBL50865.1| UDP-glucose 4-epimerase [Lactobacillus crispatus ST1] Length = 330 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 45/331 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDKKIDAVMHFAAYSLVPESVKKPLKYYDNNVAGMISLLQAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P NP +PY TK + ++AW GI Sbjct: 106 DASVKYLVFS-SSAATYGIPKKLPITEDTPLNPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V + G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGAASDGTIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK + + +N+G N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMETNKSDVFNLGTAQGYSNLEILNAAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 R G DS+K ++ +GW P+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKH 306 >gi|261402193|ref|YP_003246417.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] gi|261369186|gb|ACX71935.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] Length = 334 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 147/342 (42%), Gaps = 43/342 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG+ L + L+ D +V+ ID Y G L ++K+ + F F++ DI Sbjct: 12 ILVTGGAGFIGTNLIKRLLEDNN-KVICIDN-NYTGRLENIKQFLDNPNFKFIKHDITKP 69 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L D I N A + + T+I G +LE K Sbjct: 70 IKIEGEL-----DEIYNLACPASPPHYQKNPIFTLNTSIFGIINILELA----------K 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 K + L ST EVYG+ + E P P + Y K ++ + +G+ Sbjct: 115 KHNAKILHASTSEVYGNPLEHPQKESYWGNVNPIGPRACYDEGKRVAETYCYEYWKNFGL 174 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL-- 233 V + N YGPY P +++ I + ++ + +YGDG+ R + Y++D + + Sbjct: 175 DVRIVRIFNTYGPYMDPNDGRVVSNFIIQALKNEPLTVYGDGKQTRSFQYIDDLIEGMLK 234 Query: 234 YLVLKK----GRIGERYNIG-------GNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 Y+ + K ++ ++N GN E I E+ + LIP+S S Sbjct: 235 YMEMDKEGLENKLKSKFNWDTIPVLNMGNPEEFTI---LELANKVLELIPESKSEIVFKP 291 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D P R D + K + W P+ +E GL KT+ ++ Sbjct: 292 LPKDDPVRRRP---DITMAKEVLSWKPKIRLEEGLKKTIEYF 330 >gi|254776506|ref|ZP_05218022.1| UDP-glucuronic acid decarboxylase 1 [Mycobacterium avium subsp. avium ATCC 25291] Length = 380 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 140/337 (41%), Gaps = 40/337 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+G+ LC L++D ++V+ +D L+ +G + + F+Q D+CD Sbjct: 53 RVLITGGAGFLGAHLCARLLDD-GVEVVSVDDLSTSGPAVRFGDRPG---YRFVQRDVCD 108 Query: 62 RECIRSALKEFQPDAIVNFA-AESHVD---RSILGADEFITTNIIGTFILLEETRLWWSC 117 I F DA+ + A A S VD R I + + T GT LE Sbjct: 109 PGLIDEVGSGF--DAVFHLASAASPVDYQRRPI----QTLRTGSAGTATALEIA------ 156 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWG 172 ++ RF+ ST EVYG + E P P S Y K ++ L A+ Sbjct: 157 ----ERAGARFVLASTSEVYGDPESHPQRESYWGNVNPVGPRSVYDEAKRYAEALTFAYH 212 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 V ++ N YGP + +++P + + G + + G G R YV+D + Sbjct: 213 RLGRADVGVARIFNTYGPGMRADDGRMVPTFCLQALRGDPLTVSGAGLQTRSLCYVDDTI 272 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L + L NIG E + LI + T I+F Sbjct: 273 TGL-IALAHSDFAGPVNIGNPTELTVLSAA--------ELIRELAGSTSTIQFTPPATDD 323 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R D + +GW P+ + +GL+ T+ W+ + Sbjct: 324 PQRRCPDIRLARQRLGWRPRVDYRTGLSTTLAWFAER 360 >gi|126659675|ref|ZP_01730804.1| GDP-D-mannose dehydratase [Cyanothece sp. CCY0110] gi|126619020|gb|EAZ89760.1| GDP-D-mannose dehydratase [Cyanothece sp. CCY0110] Length = 362 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 19/323 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ +V I + T N + + + Q+ FL Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHMYVDPHQTEAKLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E +P I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVKPFEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + RF Q + E++G + E P+ P SPY+ K + + L + +Y Sbjct: 123 --QQRTGIEVRFYQAGSSEMFGKVQDIPQKETTPFYPRSPYACAKVYAHWQTLNYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI+R++ G+ LY G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAISRIVAGTQKKLYLGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + + E ++ +I F L + Y + R++ RP Sbjct: 241 MWLMLQQEKPDD--YVVATGETHSVKEFLQIAFKYVNLNWEDYVDFDK-RYL--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFPQENMES 315 D +K K+++GW P E Sbjct: 296 LLIGDPTKAKTQLGWEPSVTFEQ 318 >gi|327192497|gb|EGE59451.1| GDP-mannose 4,6-dehydratase protein [Rhizobium etli CNPAF512] Length = 375 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 24/281 (8%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 79 DMTDSTNLIRVIQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 134 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 135 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 192 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 193 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQEKLYLGNLDAKRDWGHAREYVRG 251 Query: 233 LYLVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLLD----ALIPKSYSHTELIRFIE 285 ++L+L++ G+ G R +D F ++G +D + K Y T +E Sbjct: 252 MWLMLQQDEPGDYVLATGETHSVRSFVDKAFAKVGMPIDWRGNGVEEKGYDKTSGQCVVE 311 Query: 286 DRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTV 321 P + R + D +K +++GW + +++ +++ V Sbjct: 312 IDPTYFRPTEVDLLIGDPTKAHTKLGWKHETSLDQLVSEMV 352 >gi|1161517|emb|CAA89986.1| UDP-galactose 4-epimease [Corynebacterium glutamicum] Length = 329 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS L+ V +ID + GN ++ ++ ++ D+ Sbjct: 1 MKLLVTGGAGYVGSVRAAVLLEHGH-DVTIIDNFS-TGNREAVPADAR-----LIEGDVN 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L E + +V+FAA S V S+ +E+ N++ LL+ R Sbjct: 54 D--VVEEVLLEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG D +EDMP P++ Y ATK S DY + ++ +G+ Sbjct: 104 -AHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMIEGSH---VFLYG------DGQNVRDWL 224 N G Y LIPL + + H +F++G DG VRD++ Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVL--QVATGHREKIFMFGDDWPTPDGTAVRDYI 220 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ D +A L L+ G+ +N+G G + ++ +++ E+ H Sbjct: 221 HILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREV-----------TGHPI 269 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S K K E+GW P+ Sbjct: 270 PAEVAPRRAGDPATLIASSEKAKQELGWTPEHT 302 >gi|13476535|ref|NP_108105.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] gi|14027296|dbj|BAB54250.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] Length = 343 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 143/327 (43%), Gaps = 44/327 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS C+ L + V D L GN S+ + DI DR Sbjct: 6 ILVTGGAGFIGSHTCKLLAAAGYLPV-AFDNLCR-GNRKSVA------WGPLVVGDIRDR 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R+A+ ++P ++++FAA ++V S+ ++ +TN+ GT +L+ R Sbjct: 58 DALRAAIGTYRPISVIHFAALAYVGESVQEPADYYSTNVTGTIAVLDAAR-------AHA 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 D F S+ YG + E NP SPY TK + ++ + YG+ + Sbjct: 111 IDNIIFS--SSCATYGVPEALPVRETSLQNPISPYGRTKLMGEQIIGDYASAYGMKFAIL 168 Query: 182 -------SNCSNNYGPYHFPEK-LIP---LAITRMIEGSHVFL----YGDGQNVRDWLYV 226 ++ G +H PE L+P +A + +I+ VF DG VRD+++V Sbjct: 169 RYFNACGADPDGELGEWHSPETHLVPRVLMAASGIIDEIEVFGTDYDTPDGTCVRDYIHV 228 Query: 227 EDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D RA L+ G + N+G +I+ +G + +P F Sbjct: 229 SDLARAHLKALQHLEGGGQNLAVNLGTGRGVSIREIIQAVGRITSRPVPAV--------F 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + RPG D K ++ +G+ PQ Sbjct: 281 RDRRPGDPAELYADPGKARAHLGFVPQ 307 >gi|154247496|ref|YP_001418454.1| NAD-dependent epimerase/dehydratase [Xanthobacter autotrophicus Py2] gi|154161581|gb|ABS68797.1| NAD-dependent epimerase/dehydratase [Xanthobacter autotrophicus Py2] Length = 334 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 125/239 (52%), Gaps = 17/239 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR ++TG AGFIG L + L+++ V+ D +T ++ +LKE +++SN F + Sbjct: 1 MRYLITGTAGFIGFHLAKRLLDEGHF-VVGYDGMTKYYDV-ALKEKRHAILARSNGFKAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D++ + A + +PD IV+ AA++ V S+ +I +N++G+F +++ Sbjct: 59 IAALEDKDALEKAAELAEPDVIVHLAAQAGVRYSLENPRSYIDSNLVGSFNVID------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 L+ K + L ST VYGS +K F+E D P + Y+ATK S + + ++ H Sbjct: 113 --LASRFKPK-HLLLASTSSVYGSNEKVPFAESDKADEPMTIYAATKKSMEVMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP YGP+ P+ + + + + +YG+G+ RD+ Y++D + + Sbjct: 170 HKIPTTAFRFFTVYGPWGRPDMALFKFVDAIRNDRPIEIYGEGKMSRDFTYIDDLIEGI 228 >gi|289647537|ref|ZP_06478880.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. aesculi str. 2250] Length = 360 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 38/342 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 +++VTG GF G C +L + I V SL +E+ N + DIC Sbjct: 15 KVLVTGHTGFTGGWACLWLTS---IGAHVAGYSLAPETTPSLFQELGLENDVDSVLGDIC 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + A++ FQPD I++ AA+ V RS + N GT +LE RL Sbjct: 72 DFDKLLQAVEAFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARL------- 124 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 K L ++TD+VY + + + E+ P PYSA+KA+++ ++ ++G +Y Sbjct: 125 -VKSVRGVLCVTTDKVYKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASYPFSQ 183 Query: 176 --GIPVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVR 231 G + + N G + E +LIP + + EG + L Y D R W +V V Sbjct: 184 GLGPAIATARGGNIIGGGDWSEDRLIPDFVRAVNEGQVMTLRYPDA--TRPWQHVLALVH 241 Query: 232 ALYLVLK------KGRIGERYNIGGNNERK-NIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++L GR+ + +N+G ++ ++ V E L+ + L F+ Sbjct: 242 GYLVILAGLLSENPGRVAKAWNLGPQELKQYSVRDVLE-------LMSADWQRPNL-EFM 293 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ A+DSS ++++ W P N E + KT WY D Sbjct: 294 DNPLPEAGALALDSSIARNQLNWIPVWNTEEVVEKTASWYRD 335 >gi|229579804|ref|YP_002838203.1| dTDP-glucose 4,6-dehydratase (RfbB-1) [Sulfolobus islandicus Y.G.57.14] gi|228010519|gb|ACP46281.1| dTDP-glucose 4,6-dehydratase (RfbB-1) [Sulfolobus islandicus Y.G.57.14] Length = 126 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 20/137 (14%) Query: 210 HVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLD 268 HV +YGDG+ RDW++VED R + +L + GE YNI G N+D++ LL+ Sbjct: 2 HVPVYGDGKAERDWIFVEDTARIIADLLDRAEWKGEVYNIPGKQRVTNLDLLK----LLE 57 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++ K I+F+ DRPGHDRRY +++ + ++ GL KT WYL+N Sbjct: 58 EVMGKEIK----IKFVSDRPGHDRRYCMNTRLS------YETTPLKDGLRKTYEWYLENE 107 Query: 329 WWWRPL-----YKELKP 340 WWWRPL +KE +P Sbjct: 108 WWWRPLIADKFFKEDEP 124 >gi|260469612|ref|ZP_05813777.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259028638|gb|EEW29949.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 345 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 145/344 (42%), Gaps = 34/344 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +V GGAGF+GS LC L+ D +V+ +D + G ++L + + F+ ++ DI Sbjct: 24 RALVAGGAGFLGSHLCERLLQD-GYEVVALDNF-HTGKKHNLNALLRDPKFTCIEHDI-- 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + D I N A + T+++G+ LLE R Sbjct: 80 ---VNALPLDLRVDEIYNLACPASPPHYQADPIHTFKTSVLGSLNLLELAR--------- 127 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ + Q ST EVYG +G F + P S Y K S++ L + TYG Sbjct: 128 -RNNAKIFQASTSEVYGDPLVHPQPEGYFGNVNTHGPRSCYDEGKRSAETLFFDYSRTYG 186 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YG P+ +++ I + + G + +YG G R + Y +D + Sbjct: 187 LDVRVARIFNTYGRRMQPDDGRVVSNFIVQALRGEDLTVYGSGLQTRSFCYADDLIEGFV 246 Query: 235 LVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ R N+G E + E+ L+ A S I+D R+ Sbjct: 247 RLMNAPRAPAHPVNLGNPGEF----TIMELATLVVAYTNSSSKIVHRPLPIDD----PRQ 298 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 D S + +GW P+ ++ GL TV Y D + L KE Sbjct: 299 RRPDISFARDNLGWQPRISLSQGLAHTV-EYFDTLLYGNRLTKE 341 >gi|123966604|ref|YP_001011685.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9515] gi|123200970|gb|ABM72578.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9515] Length = 345 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 164/346 (47%), Gaps = 35/346 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNL--- 51 +++VTG AGFIG +C+ L+ + V+ +D L L ++ S++N+ Sbjct: 4 KILVTGCAGFIGFHVCKQLIKK-GLFVIGLDNLNNYYDISLKRARLKEIENFSKNNIKGE 62 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F++ D+ D + +++ K P +++ AA++ V SI +I +N++G Sbjct: 63 FLFIKADLKDEKILKNISKVHLPKKVIHLAAQAGVRHSIENPRAYINSNLVG-------- 114 Query: 112 RLWWSCLSQDKKDQF-RFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVL 169 + + L K +Q + S+ +YG K FSE D P S Y+ATK S++ + Sbjct: 115 --FGNVLEFCKDNQVDHLIYASSSSIYGGNKKIPFSEKDFVDYPVSLYAATKKSNELMAH 172 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVED 228 ++ H + +P YGP+ P+ + P+ T+ I S + ++ +G+ RD+ Y++D Sbjct: 173 SYSHLFKLPSTGIRLFTVYGPWGRPD-MAPMIFTKSILSSKPIKIFNNGEMFRDFTYIDD 231 Query: 229 HVRAL--YLVLKKGRIGERYNIGGNNERK-------NIDIVFEIGFLLDALIPKSYSHTE 279 A+ L L + + N+ + + NI I L I +S + + Sbjct: 232 VSEAILKLLHLPPKYLNDDKNLNSSELPELTPHRIINIGSSNPINLLEFIDILESEINIK 291 Query: 280 LIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 IR E + G ++ D+S I+ I + P ++++G+ + V WY Sbjct: 292 AIRVFEKMQLGDVKKTYADTSYIEDLINYKPNTSLKNGIREFVKWY 337 >gi|87310590|ref|ZP_01092719.1| hypothetical protein DSM3645_07985 [Blastopirellula marina DSM 3645] gi|87286811|gb|EAQ78716.1| hypothetical protein DSM3645_07985 [Blastopirellula marina DSM 3645] Length = 316 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 30/329 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGS + LV QV VID L+ G ++L +++ F++ + D Sbjct: 3 KYLVTGGAGFIGSHIVEALVARGD-QVRVIDNLS-TGKRSNLDHVAKR--IEFVEGCLTD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A++ D I + AA + V S+ + + T LL E R Sbjct: 59 SAVVADAVRGV--DVIFHQAALASVPLSVERPLDTHAHCVTATVNLLNEAR--------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D R + ++ YG E D+P NP SPY+A K +++Y + A+ HTYGI + Sbjct: 108 QADVRRVIYAASSSAYGDAPTLAKRETDLP-NPLSPYAAAKLAAEYYLQAFYHTYGIETV 166 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVED-HVRALYL 235 N +GP P+ +IP+ IT +++G +YGDG+ RD+ +V++ + L Sbjct: 167 GLRYFNVFGPRQDPDSPYSAVIPIFITLLLQGDRPVIYGDGEQSRDFTFVKNVALANLAA 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 G G N+ + ++ + L A + + + R G R Sbjct: 227 ADANGVAGRIINVANGRSTSLLRLIELLNRELGANVQPQH--------VPPRVGDVRDSM 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D++ ++ +G+ + + E+GL ++ +Y Sbjct: 279 ADNTLARTLLGYEVEIDFETGLQMSIDYY 307 >gi|330976378|gb|EGH76435.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 331 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 42/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + R L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVARRLC-ELGVEVVGID------NLNDYYSVELKQSRLAILQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDTEGLSTLFSQNAFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G + +NIG K ++ V D L E R Sbjct: 225 VESILRLRLLPPDAVGSEPPHQLFNIGRGQPVKLLEFV-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + G + D S + I + PQ ++++G+ V WY ++ Sbjct: 277 YLPLQAGDVLQTWADVSALSQWIDFQPQVSVDTGVRAFVDWYREH 321 >gi|304389157|ref|ZP_07371192.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] gi|304336889|gb|EFM03088.1| dTDP-glucose 4,6-dehydratase [Neisseria meningitidis ATCC 13091] Length = 88 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 41/81 (50%), Positives = 58/81 (71%), Gaps = 4/81 (4%) Query: 251 NNERKNIDIVFEIGFLLDALIPKSYS----HTELIRFIEDRPGHDRRYAIDSSKIKSEIG 306 +NE+ NI++V I LL+ L P+ + + +LI F++DRPGHD RYA+D++KI+ ++G Sbjct: 1 HNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLG 60 Query: 307 WFPQENMESGLNKTVCWYLDN 327 W P E ESGL KTV WYLDN Sbjct: 61 WQPLETFESGLRKTVQWYLDN 81 >gi|320105812|ref|YP_004181402.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319924333|gb|ADV81408.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 316 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 41/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TG AGFIGS++ R L+ + +V +D L+ G L ++++I N F D+ D Sbjct: 3 KVLITGVAGFIGSSIARALLAE-GAEVRGLDNLS-TGKLENIEQIR--NGIDFRHGDVQD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCLS 119 + A K D + + AA V S+ AD T N+IGT +LE R Sbjct: 59 AVAVADACKGV--DYVFHEAAIPSVPVSV--ADPVGTNGPNLIGTLQVLEAAR------- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + R + ++ YG + EDM P S Y+ K + +Y + ++ YG+ Sbjct: 108 --QAGVKRVVYAASSAAYGDSPELPKREDMAPAPLSAYAVQKLTGEYYLTSYAKMYGLET 165 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +GP P ++ I++M+ G+ ++GDG RD+ Y+++ V A L Sbjct: 166 VSLRYFNIFGPRQDPTSQYSGVLARFISQMLAGTKPTIFGDGSTSRDFTYIDNVVSANLL 225 Query: 236 VLKKGR--IGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTELIRFIEDRPG 289 K G G+ +N+ ++ E+ G+ D + F +R G Sbjct: 226 AAKSGSHVAGKVFNVATGTSVTLLEAYEEVRRITGYAGD------------LDFKPERVG 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S + E+G+ + +GL +T+ WY Sbjct: 274 DIKHSVADISLARKELGYGVVADFAAGLEETIAWY 308 >gi|302556896|ref|ZP_07309238.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus Tu4000] gi|302474514|gb|EFL37607.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus Tu4000] Length = 329 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 35/329 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ D V +D + G ++ + + F+ +Q ++ + Sbjct: 22 VVTGGAGFVGSHLCAALL-DAGAAVTCVDDFS-TGRPENVSPLLERPGFTLVQANVAEEL 79 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + PD +++FA+ + + + T +GT LE R + Sbjct: 80 PVSRS-----PDLVLHFASPASPADYLRLPLHTMETGSLGTRNALELAR----------R 124 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST EVYG + E P P S Y K + L A+ +G Sbjct: 125 AGARFVLASTSEVYGDPQQNPQDERYWGNVNPVGPRSVYDEAKRFGEALTTAYAEAHGTD 184 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P + + + G + + GDG+ R YV D V + Sbjct: 185 TCIVRLFNTYGPRMRGHDGRAVPTFVRQALAGEPLTVTGDGRQTRSLCYVHDTVSGVLAA 244 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY-A 295 G G NIG E + L +I + S +E +R IE RP D Sbjct: 245 AAHGMRGP-VNIGNPGELTMLG-------LARLVIALAGSRSE-VRHIE-RPVDDPAVRC 294 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + ++GW P E GL +T+ W+ Sbjct: 295 PDITLARDKLGWEPHVAAEEGLRRTIDWF 323 >gi|220935279|ref|YP_002514178.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. HL-EbGR7] gi|219996589|gb|ACL73191.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio sp. HL-EbGR7] Length = 335 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 83/347 (23%), Positives = 152/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG+ L L+ + +V+ +D L Y NL L I+ + F+ ++ Sbjct: 1 MKVLVTGTAGFIGNTLAIRLL-ERGDEVIGVDNLNDYYDVNLKKARLARIADNPAFTDVR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI DR + +P+ +VN AA++ V SI ++ TN++G +LE R Sbjct: 60 ADIADRAAMEKVFATHKPERVVNLAAQAGVRYSIENPHAYVDTNLVGFCNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ FS D +P S Y+A+K +++ + + Y Sbjct: 116 -----HHGVEHLVYASSSSVYGANTSMPFSVHDNVDHPMSLYAASKKANELMAHTYSSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + ++ G + ++ G++ RD+ Y++D V + Sbjct: 171 KLPTTGLRFFTVYGPWGRPDMALFMFTRNILAGKPIDVFNYGKHRRDFTYIDDIVEGVIR 230 Query: 236 VLKKGRIG------------------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL + + YNIG N + ++++ I L L K+ + Sbjct: 231 VLDRVPAPNPDWTGAAPDSATSYAPYQLYNIGNN---QPVELMHYIEVLEQCLGKKAEKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + ++ + P +E G+ V WY Sbjct: 288 -----LLPLQPGDVPDTYADVQDLIKDVDYKPDTPVEQGITNFVNWY 329 >gi|196045541|ref|ZP_03112772.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] gi|196023748|gb|EDX62424.1| UDP-glucose 4-epimerase [Bacillus cereus 03BB108] Length = 338 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYIGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTIPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTSPIKEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK + E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGV-EAYNLGTGKGYSVLEMVKAFEKVSGRKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|254374614|ref|ZP_04990095.1| UDP-glucose 4-epimerase [Francisella novicida GA99-3548] gi|151572333|gb|EDN37987.1| UDP-glucose 4-epimerase [Francisella novicida GA99-3548] Length = 339 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKVSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +E A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LDKAKLTKVFQEHDIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K ++F+ S+ VYG +K F+EDMP + ++PY ATK L+L I Sbjct: 114 QEYK-VYKFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATK-----LMLE-----DILR 162 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 163 DLQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKAKRELGFETQKTIDDICDDMLKW 330 >gi|319767737|ref|YP_004133238.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] gi|317112603|gb|ADU95095.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] Length = 325 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 31/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 ++++VTGGAGFIGS L L + L V +D Y+ + + +++ Sbjct: 12 LKIVVTGGAGFIGSHLAARL-SGLGYDVAAVDCFHPYYSAERKERQFQTLTGGRVPLVRL 70 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E + L EF+PD + + AA V S+ +I +I T +L Sbjct: 71 DLLDGERTKRWLVEFRPDVVYHLAALPGVPYSLEEPLAYIDYDIKATVNVLA-------- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + L S+ VYG D+G L E + SPY+A K ++ A+ H Sbjct: 123 -AAGEAGAAHVLFASSSSVYG--DRGNVPLREEMVDGRVVSPYAAAKYGAESFCHAYAHL 179 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG + + YGP+ P+ I + R++ G + +YG G RD+ Y++D V Sbjct: 180 YGYQMTIFRYFTVYGPWGRPDMAIGTFLRRLLAGEEIVVYGKG-TARDYTYIDDIV---- 234 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRPGHDR 292 +G I + GG +E N+ + ++ L+ + H ++ + +R G + Sbjct: 235 ----EGMIAALHRSGGRSEVFNLGAGAPV--TMEQLLAELRKHFPDMKIVHAPERKGDVK 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P+ GL +TV W Sbjct: 289 ATWADITKAERAFGYKPKVAFAEGLARTVAW 319 >gi|297624868|ref|YP_003706302.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297166048|gb|ADI15759.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 320 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 14/253 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAG-NLNSLKEISQSNLFSFLQV 57 M++ VTG AGFIGS L L D I V + G + ++ + L+ Sbjct: 1 MKIFVTGAAGFIGSHLAEALAKRGDTVIGVDNFNDYYDPGRKRRNAAAVTAHPGVTLLEA 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DRE + + +E DA+ + AA + V S+ ++ N++ T L++ R + Sbjct: 61 DIRDRERMFALFEEHAFDAVAHIAAMAGVRNSVANPALYMDVNLVATQGLMDAARTFGVQ 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYG 176 F+ ST +YG F E P P PY+A K +++ L + YG Sbjct: 121 ---------NFVFASTSSIYGDTPDIPFRESDPCVRPPQPYAAAKRAAELLGYTYHQLYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP P+ + L + G + LY +G RDW YV+D V + L Sbjct: 172 LPFTATRFFTVYGPRGRPDMMPGLLAESLFYGRTIPLY-EGDMRRDWTYVDDIVAGVVLA 230 Query: 237 LKKGRIGERYNIG 249 L K E N+G Sbjct: 231 LDKPLGYEILNLG 243 >gi|167412397|gb|ABZ79853.1| unknown [Campylobacter jejuni] gi|167412425|gb|ABZ79876.1| unknown [Campylobacter jejuni] Length = 318 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 42/335 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG+GF+GS LC+ L+ +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 4 ILITGGSGFLGSNLCKRLLGGDN-KIVCVDN-NYTGRMENIKELLENENFTFIEHDICEP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I L D I NFA + + G T T++ G +LE Sbjct: 62 LKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ LQ ST EVYG D + ++ Y NP + Y K ++ L + Sbjct: 107 -KEHNATILQASTSEVYG--DPLVHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFDYHR 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 GI + + N YG P +++ I + + G + +YGDG R + YV+D + Sbjct: 164 YEGIDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGLQTRSFCYVDDLID 223 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + V+ + N G +E F I L +I K+ S +++I +D P Sbjct: 224 IIIKVMNSSKDFQGPINTGNPSE-------FTIKELAQKIIEKTGSKSKII--YKDLPSD 274 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 275 DPTQRRPDISLAKTKFNWEPKINLDEGLEKTIKYF 309 >gi|332184339|gb|AEE26593.1| UDP-glucose 4-epimerase [Francisella cf. novicida 3523] Length = 339 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 157/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ LK+I+ + F F Q+D+ Sbjct: 4 KILVTGGTGYIGSHTVVELL-DRDYQVVVVDNLSNSKLSVVDRLKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +E DA+++FA V S+ E+ NI GT LLE + + Sbjct: 62 LDKHKLAKVFQEHDIDAVIHFAGFKAVGESVDKPLEYYHNNIQGTLNLLELMQEYQV--- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F+ S+ VYG +K F+EDMP + ++PY TK L+L I Sbjct: 119 ------YNFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGTTK-----LMLE-----DILR 162 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 163 DLQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETRDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K + E+G+ Q++++ + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKARRELGFETQKSIDDICQDMLKW 330 >gi|271963985|ref|YP_003338181.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM 43021] gi|270507160|gb|ACZ85438.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM 43021] Length = 323 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ + V + + LT G+ +++ + F ++ D+ Sbjct: 5 RVVVTGGAGFLGSYLCERLLAEGAGVVCMDNFLT--GSPRNVEHLIGRAAFRLVECDLTG 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++FA+ + + E + +GT L R Sbjct: 63 FVHVPGDV-----DLVLHFASAASPTDYLRHPIETLKVGSLGTLHALGLAR--------- 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 +KD RF+ ST EVYG + E P P S Y K ++ L A+ +++ Sbjct: 109 EKDA-RFVLASTSEVYGDPLEHPQRESYRGNVNPVGPRSVYDEAKRFAESLTTAYRNSHR 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP P + IP I + + G + + GDG R YV+D + ++ Sbjct: 168 ADTAIVRIFNTYGPRMRPHDGRAIPTFIRQALYGEPITVTGDGGQTRSICYVDDTIEGIF 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G G NIG E + + I L + P I FI DRP D Sbjct: 228 ALADSGFEGP-VNIGNPAELTMLALAETIRELTGSDSP--------IHFI-DRPAEDPEI 277 Query: 295 AI-DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S S +GW P+ ++ GL++T+ W+ Sbjct: 278 RCPDTSLAASRLGWTPKVDIVDGLSRTISWF 308 >gi|153004762|ref|YP_001379087.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152028335|gb|ABS26103.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 40/334 (11%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R +V G AGFIGS L R+L + V +D L GN +L +++ F F++ DIC Sbjct: 5 RAVVLGAAGFIGSHLSDRFLAEGWR--VTGVDNLI-TGNRRNLDHLARDPRFDFVEADIC 61 Query: 61 ---DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DR R DA+++FA+ + + E + G + Sbjct: 62 EPLDRITGRV-------DAVLDFASPASPIDYLKHPFETLRVGSHGV----------ENA 104 Query: 118 LSQDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L K+ FL ST EVYG + + P P + Y K ++ + +A+ Sbjct: 105 LKLAKRAGAPFLLSSTSEVYGDPLVHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVAYR 164 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + V ++ N YGP + +++P + + + G + ++GDG R + YV+D+V Sbjct: 165 RYEKVDVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPLTVFGDGTQTRSFCYVDDNV 224 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 ++ +L R + NIG NE + + L+ + P + ED P Sbjct: 225 EGIWRLLHS-RFQDPVNIGNPNEMTVLQFAEAVQRLVGSHCPVIHEA-----LPEDDP-- 276 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D S+ K +GW P+ + G+ +T+ W+ Sbjct: 277 -RVRRPDISRAKELLGWEPKVGFDDGMRRTIGWF 309 >gi|327542910|gb|EGF29365.1| nucleotide sugar epimerase [Rhodopirellula baltica WH47] Length = 256 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 27/261 (10%) Query: 75 DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTD 134 DA++N AA + V S+ ++TTN +G+ LL++ + + +++ ST Sbjct: 11 DAVLNLAARAGVRYSMENPHVYMTTNAMGSLNLLDQMQ---------RVGVKKYVLASTS 61 Query: 135 EVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF 193 +Y F E +P N P SPY+A+K +++ + ++ H Y I V + YGP Sbjct: 62 SLYAG-QPMPFIETLPVNTPISPYAASKKAAEAMAYSYHHLYDIDVSVCRYFTVYGPAGR 120 Query: 194 PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIG-ERYNIGGNN 252 P+ I I + EG+ + L+GDG+ RD+ +V D L+ +G E N+GG Sbjct: 121 PDMCIFRFIKWIDEGTPIELFGDGEQARDFTFVSDIAAGTIAALQP--VGYEVINLGGGG 178 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI---DSSKIKSEIGWFP 309 +++ + IG L + L K+ +E + H I D SK IGW P Sbjct: 179 TPVSLNDI--IGRLENLLGKKAK--------VEHKTFHKADIKITSADISKANDLIGWTP 228 Query: 310 QENMESGLNKTVCWYLDNNWW 330 + ++ GL +V WY +N W Sbjct: 229 KIELDEGLAASVDWYRENQPW 249 >gi|226357052|ref|YP_002786792.1| UDP-glucuronate 5-epimerase [Deinococcus deserti VCD115] gi|226319042|gb|ACO47038.1| putative UDP-glucuronate 5-epimerase (UDP-glucuronic acid epimerase) [Deinococcus deserti VCD115] Length = 340 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFL 55 M+++VTG AGFIGS L R+L + +V+ D Y L + ++ F+ + Sbjct: 6 MKVLVTGAAGFIGSTLSHRFL--ERGDEVIGFDNFNPYYDPQLKRDRAARLTVKPGFTLI 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + ++ DR + +E +P+ +VN AA++ V S+ +I NI+G +LE Sbjct: 64 EGNLEDRSAVDRLFREHRPERVVNLAAQAGVRYSLENPHAYIDANIVGFMNILE------ 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + S+ VYG FS D +P S Y+ATK +++ + + H Sbjct: 118 GCRHHGVQ---HLAYASSSSVYGMNTSMPFSVHDNVDHPLSLYAATKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ + L +++G + ++ GQ RD+ YV+D V + Sbjct: 175 YGLPTTGLRFFTVYGPWGRPDMAMFLFTRAILQGQPINVFNHGQMQRDFTYVDDIVEGVV 234 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V + YNIG NN + + ++ +L+ + K Sbjct: 235 RVTDQVATQNSQWNGAQPDPGTSSAPYRLYNIGNNNPVQLLHLI----EVLEEKLGKKAE 290 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L D P YA + + ++G+ P ++E G+ + V WY Sbjct: 291 KNMLPLQDGDVPA---TYA-NVDDLVRDVGFKPATSIEDGVGRFVEWY 334 >gi|33601900|ref|NP_889460.1| capsular polysaccharide biosynthesis protein [Bordetella bronchiseptica RB50] gi|33576337|emb|CAE33416.1| capsular polysaccharide biosynthesis protein [Bordetella bronchiseptica RB50] Length = 341 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 96/335 (28%), Positives = 151/335 (45%), Gaps = 32/335 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG AGFIGS L L+ L V+ +D G+ ++L E+ Q F+F++ Sbjct: 20 LVTGCAGFIGSNLLETLLG-LDQAVVGLDNFA-TGHQHNLDEVRAAVTPEQWARFTFIEG 77 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWW 115 DI D + A++ D +++ AA V RS+ + ITTN IG F+ + Sbjct: 78 DIRDLAACQRAVQGV--DRVLHQAALGSVPRSL---KDPITTNEVNIGGFLNM------- 125 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++D + Q F+ ++ YG ED NP SPY+ TK ++ + +Y Sbjct: 126 LVAARDAQVQ-AFVYAASSSTYGDHPDLPKVEDRIGNPLSPYAVTKYVNELYADVFARSY 184 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P+ +IP MI+G V + GDGQ RD+ +VE+ V+ Sbjct: 185 GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVENAVQ 244 Query: 232 ALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A L G + YN+ N R + +FE L AL + S+ + + E R G Sbjct: 245 ANLLAAMAAPEGANQVYNV-AYNARTTLTELFE--HLRRALAGQGVSYEKAPVYAEFRAG 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D K +G+ P ++ GL + WY Sbjct: 302 DVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY 336 >gi|260430725|ref|ZP_05784697.1| UDP-glucuronate 5'-epimerase [Silicibacter lacuscaerulensis ITI-1157] gi|260418166|gb|EEX11424.1| UDP-glucuronate 5'-epimerase [Silicibacter lacuscaerulensis ITI-1157] Length = 339 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 160/349 (45%), Gaps = 42/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R++VTG AGFIG L R L+++ QV D +T Y L + + Q+ FS + Sbjct: 3 RVLVTGTAGFIGFHLARLLLSE-GFQVHGYDGMTDYYDVTLKQRRHQMLLQTPGFSATED 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + + + + +EF+PD IV+ AA++ V S+ ++ +N++GTF ++E R Sbjct: 62 LLENHDRLMQVAEEFRPDIIVHLAAQAGVRYSLENPRSYVESNVLGTFNVMEVAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + L ST VYG+ + FSE D + + Y+ATK +++ + ++ H + Sbjct: 117 ----THEVEHLLMASTSSVYGANEDMPFSELDKADHQLTIYAATKKANEAMGHSYAHLWD 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YG + P+ ++ + +Y +G+ RD+ +V+D VR + L+ Sbjct: 173 LPTTMFRFFTVYGNWGRPDLAYFKFTDAILHDRPIDIYNNGEMYRDFTHVDDLVRGIRLL 232 Query: 237 L--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + K I E NIG +++ + +D + I + ++Y Sbjct: 233 IDAVPERPASKADIAEGDSLSPVAPFRVVNIGNSDKVRLMDFIEAIEEAVGKKAIRNYMP 292 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ D P D+S ++ G+ PQ ++ G+ V WY D Sbjct: 293 MQM----GDVPA----TWADTSLLQRLTGFKPQTDIRDGMKSFVAWYRD 333 >gi|297622044|ref|YP_003710181.1| NAD-dependent epimerase/dehydratase [Waddlia chondrophila WSU 86-1044] gi|297377345|gb|ADI39175.1| NAD-dependent epimerase/dehydratase [Waddlia chondrophila WSU 86-1044] Length = 317 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 41/335 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEIS----QSNLFS 53 L++TG AGFIG L R + D++ N NS LKE+ + Sbjct: 5 LLITGAAGFIGFHLAR-------AAKMRGDRVVGLDNFNSYYDPKLKEMRALLLKQEGIE 57 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 + DICD + K I + AA++ V S+ ++ +NI G +LE R Sbjct: 58 VIHGDICDEALLEKTAKSHAVTHIAHLAAQAGVRYSLENPKAYVKSNIEGFLNVLEVCR- 116 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWG 172 + + + S+ VYG +K FSE D +S Y ATK S++ + Sbjct: 117 ---------RQNLKLVYASSSSVYGMNEKVPFSEIDRVDLQASLYGATKKSNELFAATYH 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H + I YGP+ P+ +++ G + ++ G+ +RD+ Y++D VR Sbjct: 168 HLFNISATGLRYFTVYGPWGRPDMAYYSFTQKILNGDPIKVFNHGKMLRDFTYIDDIVRG 227 Query: 233 LYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + K E +N+G + RK I+I I K+ + F+ +PG Sbjct: 228 TLAAIDKECACEVFNLGNHRPTELRKFIEI-----------IEKAVGKKAKMEFLPMQPG 276 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + +G+ P+ ++E+G+ V W+ Sbjct: 277 DVPATFADISHSQKSLGFEPKTSLETGIPLFVEWF 311 >gi|293395896|ref|ZP_06640177.1| UDP-glucuronate 5'-epimerase [Serratia odorifera DSM 4582] gi|291421394|gb|EFE94642.1| UDP-glucuronate 5'-epimerase [Serratia odorifera DSM 4582] Length = 336 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIG + L+ V+ ID + Y +L + L ++ F F+ Sbjct: 1 MKFLVTGVAGFIGYHVAERLLA-AGHHVVGIDNMNDYYDVSLKTARLDLLAGKPAFQFIA 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ + + E Q +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADRDGMATLFAEQQFQRVIHLAAQAGVRYSLENPMAYADSNLIGHLNVLEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 +K + L S+ VYG K FS ED +P S Y+ATK +++ + ++ H Y Sbjct: 116 ---HNKVEHL--LYASSSSVYGLNRKLPFSTEDSVDHPVSLYAATKKANELMSHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++ G + +Y G+ RD+ Y++D A+ Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGDSIDVYNHGEMQRDFTYIDDIAEAIVR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + +++G YNIG ++ K ++ + + L K+ Sbjct: 231 LQDVIPQANADWNVEQGSPATSSAPYHVYNIGNSSPVKLMEYIQALENALGVTARKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG + D++++ +IG+ P ++E G+ V WY Sbjct: 288 -----MLPMQPGDVLDTSADTAELYRDIGFKPATSVEQGVKHFVDWY 329 >gi|118476195|ref|YP_893346.1| UDP-glucose 4-epimerase [Bacillus thuringiensis str. Al Hakam] gi|196045289|ref|ZP_03112521.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus 03BB108] gi|118415420|gb|ABK83839.1| UDP-glucose 4-epimerase [Bacillus thuringiensis str. Al Hakam] gi|196023873|gb|EDX62548.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus 03BB108] Length = 321 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVGR-GYNVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L+ Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALNGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVFA----STSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L KS S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKS----IKEVAEVIKKLT-KSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVAKLRELVQFQAEVTWEEGLKETIKWFREEN 319 >gi|17232320|ref|NP_488868.1| GDP-D-mannose dehydratase [Nostoc sp. PCC 7120] gi|17133965|dbj|BAB76527.1| GDP-D-mannose dehydratase [Nostoc sp. PCC 7120] Length = 273 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 14/247 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L +L+ + +V I + T N + + I Q FL Sbjct: 6 RALITGITGQDGSYLSEFLI-EQGYEVHGIIRRTSTFNTDRIDHIYEDPHQEGARLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E QP I N A+SHV S + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVQPTEIYNLGAQSHVRVSFDSPEYTVDAVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + Q RF Q + E+YG + SE P+ P SPY+ K + + + + +YG Sbjct: 123 --QRRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYG 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ +++ G+ +Y G+ RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAVAQIVAGNQKSIYMGNLDAKRDWGYAKDYVRA 240 Query: 233 LYLVLKK 239 ++L+L++ Sbjct: 241 MWLMLQQ 247 >gi|149276446|ref|ZP_01882590.1| putative udp-glucuronic acid epimerase [Pedobacter sp. BAL39] gi|149232966|gb|EDM38341.1| putative udp-glucuronic acid epimerase [Pedobacter sp. BAL39] Length = 369 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/364 (23%), Positives = 152/364 (41%), Gaps = 56/364 (15%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG------NLNS 42 M+++VTG AGFIG + +YL +ND L +L G + Sbjct: 1 MKVLVTGTAGFIGFHVAKYLLERGDEVVGIDNINDYYDVSLKYRRLEETGITKGDIHYGE 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L + S+ + F ++DI D ++ K DA+ + AA++ V S+ ++ NI+ Sbjct: 61 LLQSSRYENYHFAKLDITDHGRLKKIFKGCHFDAVCHLAAQAGVRYSLSNPKAYVDANIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G +LE RL + S+ VYG ++ FS E +P S Y+A+K Sbjct: 121 GFLNILECCRL---------HKTRHLVYASSSSVYGLNEQMPFSVEHHADHPVSLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + ++ H +G+P YGP+ P+ + + M+E + +Y G+ R Sbjct: 172 RSNELMAHSYSHLFGLPTTGLRFFTVYGPWGRPDMALFIFTKAMMEKQAIDIYNHGRMKR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ Y+ D V + L + + +NIG +D + EI Sbjct: 232 DFTYISDIVSGIVGTLDRPAKADPDWSGLLPNPSNSCVPYRLFNIGRGQSVSLMDFITEI 291 Query: 264 GFLLDALIPKSYSHTELIR-FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + + E IR ++ + G D SKI+ + + P+ ++ G+ V Sbjct: 292 ---------EHNTGCEAIRNYLPLQSGDVAETWADISKIQEVMNYAPKVSVTEGVQHFVA 342 Query: 323 WYLD 326 WY D Sbjct: 343 WYKD 346 >gi|153951939|ref|YP_001398727.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. doylei 269.97] gi|152939385|gb|ABS44126.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. doylei 269.97] Length = 345 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 150/324 (46%), Gaps = 34/324 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ + Sbjct: 66 YSSLQKLFESKKPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRIL-----KA 120 Query: 122 KKDQFRFLQI-STDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K++ + I S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 121 KEEYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRT 180 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRAL 233 ++ + GP F E + I +IE + V G+ +VR + D +RA Sbjct: 181 FVTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAY 239 Query: 234 YLV---LKKGRI--GERYNIGGNNERK---NIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 YL+ KKG + GE +NI G K IDI+ + I +R +E Sbjct: 240 YLLSLESKKGNVPCGEAFNIAGEEAFKLPEVIDILLNFSDMGGGGIE--------VRQVE 291 Query: 286 D--RPGHDRRYAIDSSKIKSEIGW 307 D RP D+SKIKS I W Sbjct: 292 DRMRPIDADYQMFDNSKIKSFIDW 315 >gi|307130164|ref|YP_003882180.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] gi|306527693|gb|ADM97623.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] Length = 335 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 152/355 (42%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M+ +VTG AGFIG C+ L V+ ID NLN SLKE + L Sbjct: 1 MKFLVTGAAGFIGFYACQSLCAAGHT-VVGID------NLNNYYEVSLKEARLAKLRALP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F ++DI D + + + + + +++ AA++ V S+ + +N+IG +LE Sbjct: 54 GFHFERIDIADSQAMTALFAAEKFERVIHLAAQAGVRYSLENPMVYAESNLIGHLNVLEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG K F + D +P S Y+ATK S++ + Sbjct: 114 CR---------HNGVGHLIYASSSSVYGLNSKTPFATADSTDHPISLYAATKKSNELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H Y +P YGP+ P+ + R++ G + +Y G RD+ YV D Sbjct: 165 SYSHLYDLPTTGLRFFTVYGPWGRPDMALFKFTRRILAGEPIDIYNQGDMWRDFTYVTDI 224 Query: 230 VRALYLVLKK--GR-IG---------------ERYNIGGNNERKNIDIVFEIGFLLDALI 271 V + ++ + GR +G + YNIG + + +D V + Sbjct: 225 VEGMLRMVDQIPGRDVGWTVEGGSPATSSAPYQLYNIGHGSPVRLMDFV--------TAL 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + F+ + G + D+S + + G+ PQ +E G+ V WY D Sbjct: 277 ESALGREAVKNFMPMQAGDVYQTYADTSDLFAVTGYRPQVGVEKGVQAFVDWYRD 331 >gi|159037773|ref|YP_001537026.1| NAD-dependent epimerase/dehydratase [Salinispora arenicola CNS-205] gi|157916608|gb|ABV98035.1| NAD-dependent epimerase/dehydratase [Salinispora arenicola CNS-205] Length = 332 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 31/338 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG GF+GS + L++ +V+V D AG L+ + + + D+ D Sbjct: 6 RCLVTGGFGFLGSHVVERLLHRGD-EVVVYDP---AGPPPDLR--APAGRLRHVPGDVRD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +A + D + + AA VDR + + + N+ GT + L Sbjct: 60 AERLITAAEGV--DEVYHLAAVVGVDRYLRRPLDVVEVNVGGTH----------NALRAA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS------PYSATKASSDYLVLAWGHTY 175 ++ R + ST EVYG + + ED S YS +KA++++L A+ Sbjct: 108 RRAGARIVVSSTSEVYGRNPRVPWREDDDRVLGSTATDRWSYSTSKAAAEHLAFAYHRQE 167 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+PV + N YGP P ++ +I RM+ G +Y DG+ R + +V++ V A Sbjct: 168 GLPVTVLRYFNVYGPRQRPAYVLSRSIVRMLRGEPAVVYDDGRQTRCFTWVDEAVEATLS 227 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL--IRFIEDRPGHDR 292 R +GE +NIG + E + + +G + A P T +D P Sbjct: 228 AAGLPRAVGECFNIGSSVETTIGEAIRMVGSVAGAPGPALTVPTGAGPGAHYQDIP---- 283 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R D K + +GW + + GL +TV W N WW Sbjct: 284 RRLPDCGKAAALLGWRARMPLLEGLGRTVEWARRNPWW 321 >gi|197105947|ref|YP_002131324.1| dTDP-glucose 4,6-dehydratase protein [Phenylobacterium zucineum HLK1] gi|196479367|gb|ACG78895.1| dTDP-glucose 4,6-dehydratase protein [Phenylobacterium zucineum HLK1] Length = 324 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 145/331 (43%), Gaps = 40/331 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTGGAGFIGS LC L+ +V+ ID G+ +++ + +S FS + DI Sbjct: 1 MAVTGGAGFIGSHLCETLLAS-GARVVCIDNFQ-TGSRDNVDRLIESPNFSVVYHDIL-- 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWSCLSQ 120 E + L +F D I NFA + AD T + +G +LE Sbjct: 57 EPFPNDLPKF--DEIFNFACPASPVH--YQADRVRTALVCAVGARNVLERA--------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +D R LQ ST EVYG D E P P + Y K ++ L +G Sbjct: 104 -ARDGARALQASTSEVYGDPDIHPQPESYRGHVNPIGPRACYDEGKRFAESLFTDFGAQS 162 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 G+ V + N YGP P ++I + + + G + LYGDG R + YV+D V Sbjct: 163 GVTVKIVRIFNTYGPRMQPHDGRVISNFVVQALAGEDLTLYGDGSQTRSFCYVDDLVDGC 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGH 290 L L+ + + N+G E V E+ L+ L + S + ++R D P Sbjct: 223 LRLMASPSDLSQPVNLGNPVE----TTVAEVAELILEL---TGSRSRIVRRPLPVDDP-- 273 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RR D + ++ +GW PQ + GL +T+ Sbjct: 274 -RRRKPDITLAETRLGWRPQVPLREGLERTI 303 >gi|302039443|ref|YP_003799765.1| UDP-glucuronate 5'-epimerase [Candidatus Nitrospira defluvii] gi|300607507|emb|CBK43840.1| UDP-glucuronate 5'-epimerase [Candidatus Nitrospira defluvii] Length = 340 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 53/351 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIGS + R L+ D VL +D L ++ LKE + L F F+++ Sbjct: 8 VLVTGAAGFIGSHVSRRLL-DRGDTVLGLDNLNDYYDVR-LKEARLARLKSHPQFQFVKL 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR + + ++ +V+ AA++ V S++ + +N+ G +LE R Sbjct: 66 DLSDRAGMAALFEQHAIRRVVHLAAQAGVRYSLVNPHAYTASNVDGFLNILEGCR----- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K + + ST VYG K FS D +P S Y+ATK +++ + + H Y Sbjct: 121 --HHKAEHLVY--ASTSSVYGGHTKMPFSVHDNVDHPVSLYAATKKANELMAHCYAHLYR 176 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P+ YGP+ P+ + L ++EG + ++ G+ RD+ YV+D + Sbjct: 177 FPITGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNHGKMQRDFTYVDDIAEGVLRT 236 Query: 237 LKKGRIGERYNIGGNNERKNIDI---VFEIGFLLDALIPKSYSHTELIRFIE-------- 285 L + + N + + ++ IG ++ EL+RFIE Sbjct: 237 LDRPAQADPAWASDNPDPGSSSAPYRLYNIG---------NHQPVELLRFIEVLEQTLGM 287 Query: 286 ------------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D P YA D + + + G+ P ++E+G+ + V WY Sbjct: 288 KAQKNFLPLQAGDVPA---TYA-DVADLMRDTGFKPATSIETGIARFVEWY 334 >gi|296274100|ref|YP_003656731.1| UDP-glucose 4-epimerase [Arcobacter nitrofigilis DSM 7299] gi|296098274|gb|ADG94224.1| UDP-glucose 4-epimerase [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 66/345 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS + + L+ + ++D L+ A L++LK I F F+++D Sbjct: 1 MNILITGGAGYIGSHVAKQLLETTTYNITILDNLSTGSAKTLDTLKTIRD---FKFIELD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + + SALKE + + I++FAA V S+ ++ N + T L++ R + + Sbjct: 58 LKEFDKVNSALKEKKINTIIHFAASIVVPESVENPLKYYMNNTVNTTNLIK--RAVENNV 115 Query: 119 SQDKKDQFRFLQISTDEVYG---SLDKGLFSEDMPYNPSSPYSATKASSD---------- 165 S +F+ ST VYG ++ E P NP +PY +K S+ Sbjct: 116 S-------KFIFSSTAAVYGEPTNIPNTGVDESYPTNPINPYGMSKLMSEKVLQDTASVN 168 Query: 166 ----YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK-LIPL-AITRMIEGSHVFLYG---- 215 Y++ + + G L+ G H PE LIPL A T + + + +YG Sbjct: 169 SDFKYVIFRYFNVAGASADLT-----IGECHEPETHLIPLVAKTALGKRDKILIYGDDYP 223 Query: 216 --DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNI-DIVFEIGFLLD 268 DG N+RD+++V D H++A+ + N NI + + GF + Sbjct: 224 TKDGSNLRDYVHVLDLADAHIKAIDFL--------------NENSSNIFNCGYGKGFSVK 269 Query: 269 ALIP--KSYSHTELIRFIEDRPGHDRRYAI-DSSKIKSEIGWFPQ 310 ++ K ++T I I R D + D+ KIKS++ W P+ Sbjct: 270 EVVKTMKLVTNTNFISEIVSRRAGDPAILVSDNRKIKSKMNWIPK 314 >gi|256392429|ref|YP_003113993.1| NAD-dependent epimerase/dehydratase [Catenulispora acidiphila DSM 44928] gi|256358655|gb|ACU72152.1| NAD-dependent epimerase/dehydratase [Catenulispora acidiphila DSM 44928] Length = 331 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 133/333 (39%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L D V+ +D G+ ++ ++ F L+ D+ + Sbjct: 22 RAVVTGGAGFVGSHLCDRL-RDSGASVVCVDNF-LTGSAENVAHLASDPGFELLEHDVTE 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DA+ + A+ + + GT LE +C Sbjct: 80 PFDVEGPV-----DAVFHLASPASPHDYARHPLATLKAGAHGTLHALELAGRKNAC---- 130 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 FL ST EVYG + + P P S Y K ++ L G Sbjct: 131 ------FLLASTSEVYGDPLVHPQVESYWGNVNPIGPRSQYDEAKRFAEALTATHRAHLG 184 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP P + +P +T+ + G + + GDG+ R YV+D V + Sbjct: 185 FDTTIVRLFNTYGPRMRPRDGRAVPTFVTQALAGREITVAGDGRQTRSLCYVDDTVAGIL 244 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD--- 291 + G G NIG E +++ + L + P + RPG D Sbjct: 245 AAARSGHPGP-VNIGNPAELSILELADRVRELCGSSAPTVFV---------PRPGDDPDL 294 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D ++ SE+GW P +++ GL T+ W+ Sbjct: 295 RRP--DITRAVSELGWAPVVDLDKGLTATIDWF 325 >gi|297545125|ref|YP_003677427.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842900|gb|ADH61416.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 329 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 149/332 (44%), Gaps = 50/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M ++V GGAG+IGS L+N K +V+V+D L +K +S L L + D+ Sbjct: 1 MAILVCGGAGYIGSHTVAALLNR-KEEVVVVDNL--------VKGHKKSVLGGKLYIGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + KE + +A+++FAA S V S+ ++ N+ GT LL+ + Sbjct: 52 RDEAFLDKVFKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMK------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIP 178 K + + + ST VYG ++ E+ NP+SPY TK + + + L W YGI Sbjct: 105 --KHNVKKIVFSSTAAVYGEPERIPIKEEDKTNPTSPYGETKLAVEKM-LKWADVAYGIK 161 Query: 179 --------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRD 222 V + + G H PE LIP+ + + + + +YG DG +RD Sbjct: 162 YVALRYFNVAGAIETGEIGEDHSPETHLIPIILQVALGKRDKIRIYGDDYPTKDGTCIRD 221 Query: 223 WLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHT 278 +++V D A L L K R YN+ GN E ++ V E+ + IP +H Sbjct: 222 YIHVMDLADAHILALDKLRKDNESAIYNL-GNGEGFSVKEVIEVARKVTGHPIPAEVTHR 280 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG S KI E+GW P+ Sbjct: 281 --------RPGDPAVLVASSEKITKELGWTPK 304 >gi|329964394|ref|ZP_08301475.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] gi|328525443|gb|EGF52491.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] Length = 359 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 52/301 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q L + D+ D + +++ QPD I N AA+SHV S + T+ + Sbjct: 52 VRDMKQRRLINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAETDAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--KIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR--------------------------IGERYNIGGN 251 ++RDW Y +D+V ++L+L+ IG R+ G Sbjct: 225 DSLRDWGYAKDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFREVGIGLRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NE K ID+ + G L + PK + RP + D +K K+ +GW P++ Sbjct: 285 NE-KGIDV--KTGKTLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRQ 330 Query: 312 N 312 Sbjct: 331 T 331 >gi|319784656|ref|YP_004144132.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170544|gb|ADV14082.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 341 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 153/352 (43%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSN--L 51 M+++VTG AGFIG + + L+ + +V+ ID + L L E S+ Sbjct: 1 MKVLVTGAAGFIGYHVAKRLL-ERGDEVVGIDNVNDYYDPEIKEARLRLLDEASRKTNAG 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F++ ++ D+ + + + D +++ AA++ V S+ ++ +NII +LE Sbjct: 60 YHFIRGNLADKSVVDACFADHAFDRVIHLAAQAGVRYSLENPHAYVESNIIAYTNMLEAC 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R S ++ ST VYG+ FSE P + P Y+ATK +++ + + Sbjct: 120 R--NSAVAH-------LTYASTSSVYGANTDMPFSEHRPADHPLQFYAATKRANELMAHS 170 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + +G+P YGP+ P+ + L ++ G + L+ +G + RD+ YV+D Sbjct: 171 YSQLFGLPTTGLRFFTVYGPWGRPDMALFLFTKNILAGEPIKLFNNGNHTRDFTYVDDIA 230 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + G +NIG NN K + + L +AL Sbjct: 231 EGVIRASDSPATGNAAWDSSRPDPATSSAPWRIFNIGNNNPVK---LTAYVEALENALGR 287 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ ++ + +PG D+S ++ +G+ P + G+ + V WY Sbjct: 288 KA-----IVELLPLQPGDVPDTFADTSALEQAVGYRPTTTVTEGVGRFVEWY 334 >gi|323345012|ref|ZP_08085236.1| NAD-dependent epimerase/dehydratase [Prevotella oralis ATCC 33269] gi|323094282|gb|EFZ36859.1| NAD-dependent epimerase/dehydratase [Prevotella oralis ATCC 33269] Length = 311 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 22/261 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS LC L+++ + ++ ID L N + + N F F +VDI Sbjct: 1 MKILITGGAGFIGSHLCDRLISEDNM-IIAIDNLVLGKKENIIHLLKDKN-FKFFKVDIL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E +R KE++ D + + AA S + + G D + N+ TF T L + Sbjct: 59 HTETMRHIFKEYEFDMVYHLAANSDIQKG--GDDPLVDYNL--TF----NTTFHLLLLMK 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + F ST ++G L P NP S Y A K +S+ + A+ +TY I Sbjct: 111 EFKVKKLFFA-STSAIFGETTGKLDENFGPLNPVSNYGAGKLASEAFISAFSNTYNIQTW 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSH-----VFLYGDGQNVRDWLYVEDHVRALYL 235 ++ N G E+ I I+ H + + G+G+ + ++YV D + + Sbjct: 170 IARFPNVVG-----ERFTHGVIFDFIKKLHNNPNELEVLGNGEQCKPYIYVRDLIDGIQF 224 Query: 236 VLKKGRIG-ERYNIGGNNERK 255 ++ G YN+G + K Sbjct: 225 IIHHSNKGYNVYNLGSESRTK 245 >gi|223040272|ref|ZP_03610549.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Campylobacter rectus RM3267] gi|222878431|gb|EEF13535.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Campylobacter rectus RM3267] Length = 352 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/371 (23%), Positives = 158/371 (42%), Gaps = 70/371 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAGNLNSLKEISQ 48 M+++VTG AGFIG L LV ND L + +L AG + EI Q Sbjct: 1 MKILVTGTAGFIGFHLANALVKRGDEVVGYDVINDYYDVNLKLARLKTAGF--EISEIKQ 58 Query: 49 SNLFS--------FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 L S F++ D+ D E ++ ++ + +VN AA++ V S++ +I +N Sbjct: 59 GKLISSKTQPNLKFIKADLADGETMKELFEKEKFGCVVNLAAQAGVRYSLINPQAYIDSN 118 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NP 153 + G +LE C K+ + S+ VYG +E+MP+ +P Sbjct: 119 VTGFMNILE------CCRHNQTKN---LVYASSSSVYG------LNENMPFSTHEGVNHP 163 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 S Y+ATK S++ + + H +G+P YGP+ P+ + L + ++G + + Sbjct: 164 ISLYAATKKSNEMMAHTYSHLFGVPTTGLRFFTVYGPWGRPDMALFLFVDAALKGKKIDV 223 Query: 214 YGDGQNVRDWLYVEDHVRALYLVL------------------KKGRIGERYNIGGNNERK 255 + G+ RD+ YV+D V+ + + + YNIG N+ + Sbjct: 224 FNYGKMKRDFTYVDDIVKGIIKCVDNPAKPNPAWDAKHPDPATSSAPFKVYNIGNNSPVE 283 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 +D + + + I K+ F+ + G D S + ++ + P ++ Sbjct: 284 LMDYIKAVELKIGREIEKN--------FLPLQAGDVPATYADVSDLVADFEYKPATSVND 335 Query: 316 GLNKTVCWYLD 326 G+ + + WY + Sbjct: 336 GVARFIEWYCE 346 >gi|37719605|gb|AAR01909.1| putative GDP-mannoheptose-4,6 dehydratase [Campylobacter jejuni] Length = 344 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRI---LKAKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG++ GE +NI G F++ ++D L+ S + +R +ED Sbjct: 241 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 293 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+ KIKS I W Sbjct: 294 RPIDADYQMFDNGKIKSFIDW 314 >gi|163938434|ref|YP_001643318.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] gi|163860631|gb|ABY41690.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] Length = 321 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 43/343 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV +V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVKR-GYEVTIVDNF-YKGKNKYHNELMKE--LRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSP----YSATKASSDYLVLAWGHTYG 176 KK F ST EVYG + E D Y +S Y+ K + L L + G Sbjct: 112 KKVVF----ASTSEVYGKGEPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEG 166 Query: 177 IPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 167 LPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGDDILVYGDGKQTRCFTYVSDAVEAT 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFE--------IGFLLDALIPKSYSHTELIRFIE 285 + + GE NIG NE KNI +V E I ++ + Y H E Sbjct: 227 IRAMDEKVNGEIINIGSENE-KNIRVVAEDIKKLTKSISKIVHVPFEEVYPHG-----FE 280 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + P +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIP--NRR--PDVTKLRELVQFQAKVTWEQGLKETIKWFREEN 319 >gi|328544173|ref|YP_004304282.1| gdp-mannose 4,6-dehydratase protein [polymorphum gilvum SL003B-26A1] gi|326413916|gb|ADZ70979.1| Probable gdp-mannose 4,6-dehydratase protein [Polymorphum gilvum SL003B-26A1] Length = 326 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 22/319 (6%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG G G+ L ++L+ + K+ LV + N + L+ + N ++ D+CD Sbjct: 6 LITGITGQDGAYLVKFLLEKNYKVYGLVRRSSHFGVNDHRLRWLGVENEVEYIDGDLCDL 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI--LLEETRLWWSCLSQ 120 + A++ +PD + N A+S V S +T + G + +LE RL Sbjct: 66 SSLIRAVRTSKPDEVYNLGAQSFVKSSW--QQPILTGEVTGIGVANMLEAVRL------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---YGI 177 + Q RF Q S+ E+YG + + SE P+ P SPY+ K +L + + + +G+ Sbjct: 117 -EAPQARFYQASSSEMYGLIQQERQSETTPFYPRSPYAVAKLYGHWLTVNYRESFDIFGV 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +L N + F + + + R+ G + G+ RDW + D+V+A++L+ Sbjct: 176 SGILFNHESPLRGLEFVTRKVTDGVARIKLGKAKTLEMGNLNAKRDWGHARDYVKAMWLM 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 L++ + + Y I D++ +I F L P + F RP Sbjct: 236 LQQ-EVADDYVIATGRTATVRDMI-DIAFGHVGLNPDDHVVINPAFF---RPAEVDILLG 290 Query: 297 DSSKIKSEIGWFPQENMES 315 D SK K +GW P+ +E Sbjct: 291 DPSKAKQRLGWEPETTLEQ 309 >gi|242309178|ref|ZP_04808333.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524219|gb|EEQ64085.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 350 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/367 (23%), Positives = 159/367 (43%), Gaps = 66/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG------NLNS 42 M+++VTG AGFIGS L L +ND + +L AG + N+ Sbjct: 1 MKILVTGTAGFIGSFLALRLLERGDEVIGLDCINDYYDVKIKYGRLKNAGISQEKISYNT 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L + + + F+ + + DRE + + K + D + N AA++ V S++ +I +NI+ Sbjct: 61 LIQSEKYPNYRFINLKLEDRENLFALFKNEKFDKVCNLAAQAGVRYSLVNPYAYIDSNIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSS 155 G +LE +C + K S+ VYG +E MP+ +P S Sbjct: 121 GFVNILE------ACRHHNIK---HLAYASSSSVYG------LNEGMPFSTSDNVDHPIS 165 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + + + + +P YGP+ P+ + L ++E + ++ Sbjct: 166 LYAASKKSNELMAHTYSYLFNLPTTGLRFFTVYGPWGRPDMALFLFTKAILEDKAIDVFN 225 Query: 216 DGQNVRDWLYVEDHVRALYLVLK---------KGRIGER---------YNIGGNNERKNI 257 +G+ +RD+ Y++D V + V+ G+ + YNIG NN K + Sbjct: 226 NGEMLRDFTYIDDIVEGVVRVIDNIPTPNPQWNGKNPDPHSSKAPYKIYNIGNNNPVKLM 285 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + I K T + +PG + + + SE+ + P ++++G+ Sbjct: 286 DFI--------EAIEKEVGKTAQKNMLPLQPGDVPATYANVNDLVSELNYKPNTSIQTGI 337 Query: 318 NKTVCWY 324 V WY Sbjct: 338 KNFVKWY 344 >gi|121533318|ref|ZP_01665146.1| GDP-mannose 4,6-dehydratase [Thermosinus carboxydivorans Nor1] gi|121307877|gb|EAX48791.1| GDP-mannose 4,6-dehydratase [Thermosinus carboxydivorans Nor1] Length = 361 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 22/269 (8%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD + N AA+SHV S + ++++ IGT LLE R+ Sbjct: 63 DLTDAANLIRIMQEVQPDEVYNLAAQSHVKVSFEMPEYTVSSDAIGTLRLLEAIRILGLT 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ RF Q ST E++G + + E P+ PSSPY+A K + ++ + + Y I Sbjct: 123 ------EKVRFYQASTSELFGKVQEVPQRETTPFYPSSPYAAAKLYAYWITVNYREAYNI 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I + R+ G LY G+ RDW + D+V A+ Sbjct: 177 FACNGILFNHESPLRGETFVTRKITRGVARIKLGLEDTLYLGNLNARRDWGFAGDYVEAM 236 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVFEI---GFLLDALIPKSYSHTELIRF 283 +L+L++ R GE +++ E ++ +I G LD + S + L+R Sbjct: 237 WLMLQQDRPDDYVIATGESHSVREFVELAFANVGIKIEWRGAGLDEIGVDSATGQVLVRV 296 Query: 284 IED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++K K+++GW P+ Sbjct: 297 DPRYFRPTEVDLLLGDAAKAKAKLGWTPK 325 >gi|15643395|ref|NP_228439.1| nucleotide sugar epimerase, putative [Thermotoga maritima MSB8] gi|4981151|gb|AAD35714.1|AE001737_7 nucleotide sugar epimerase, putative [Thermotoga maritima MSB8] Length = 346 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 27/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG +GS L R L+ DL V+VID L+ L NL F++ DI + Sbjct: 15 RVLVTGGAGAVGSNLVRRLL-DLGAFVIVIDNLS--SGYTWLLPQDAPNLL-FIEGDITN 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ E +P+ I + AA S+ ++ + N GT LLE TR++ Sbjct: 71 DVDLKRVFNE-EPEIIFHLAAFFANQNSVDYPEKDLWVNGFGTLKLLEYTRIY------G 123 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP--SSPYSATKASSDYLVLAWGHTYGIPV 179 K ++F + S +Y S F ED+P + S+PY TKA + + Y IP+ Sbjct: 124 KVERFVYAS-SGCSIYPSDAPMPFKEDLPISSWMSTPYQITKALGELYCNYFYKMYDIPI 182 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-L 235 + N++GP P + +IP I + G + + G G+ RD+ YV D V L + Sbjct: 183 TKARFFNSFGPGEVPGQYRNVIPNFIYWAMLGKPLPITGTGEETRDFTYVGDIVDGLLRM 242 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-RY 294 + IGE +N+ E K I +L + + + +T I F R + R Sbjct: 243 GYYREAIGEAFNLAAGREVK-------IKYLAEK-VNELTGNTAGIVFKPRRKWDTKPRM 294 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + K K +G+ P + + L +TV W+ N Sbjct: 295 LASNEKAKKVLGFNPDPDFDGRLAETVEWFKQN 327 >gi|218232522|ref|YP_002365288.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus B4264] gi|218160479|gb|ACK60471.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus B4264] Length = 321 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L L+ +V V+D Y G KE+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELMRR-GYEVTVVDNF-YKGKNKYHKELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVD--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEQS----IKEVAEVIKKLT-NSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E+GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLKELVQFQAKVTWENGLKETIKWFREQN 319 >gi|332186120|ref|ZP_08387866.1| short chain dehydrogenase family protein [Sphingomonas sp. S17] gi|332013935|gb|EGI55994.1| short chain dehydrogenase family protein [Sphingomonas sp. S17] Length = 325 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 145/334 (43%), Gaps = 27/334 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++VTG AGFIG A L+ + + +V D A L + F+F ++DI Sbjct: 5 ILVTGAAGFIGHATAHRLLERGETVIGIDIVNDYYDPALKEARLSTFNGRRAFTFHRMDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + I ++E +++ AA++ V SI + +N+ G ++E +C Sbjct: 65 ADADAIARLVRENGIARVIHLAAQAGVRHSIANPFAYERSNLAGHLAVME------ACRH 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL--FSEDMP-YNPSSPYSATKASSDYLVLAWGHTYG 176 Q + S+ VYG G FSED P P S Y+ATK S + + ++ YG Sbjct: 119 QPGFAHLVYA--SSSSVYGDRPMGGQGFSEDEPSVAPVSLYAATKRSCELMSQSYAALYG 176 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P YGP+ P+ R++ G + +YG+G+ RD+ Y++D V + Sbjct: 177 FPQTGLRFFTVYGPWGRPDMAYFSFTDRIMAGQPIEVYGEGRMARDFTYIDDIVDGIIGA 236 Query: 237 LKKG--RIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDR 292 L + G R NIG ++ +D++ + L E ++ + +PG Sbjct: 237 LDHPPEQGGHRILNIGNSHPVPLMDMIATLEHALG---------REAVKVMRPMQPGDVT 287 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK+ + G+ P+ + GL WY D Sbjct: 288 ATYADISKLHAIAGYEPKVRLAEGLGCFANWYRD 321 >gi|227549117|ref|ZP_03979166.1| UDP-glucose 4-epimerase [Corynebacterium lipophiloflavum DSM 44291] gi|227078814|gb|EEI16777.1| UDP-glucose 4-epimerase [Corynebacterium lipophiloflavum DSM 44291] Length = 328 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 141/331 (42%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS +C ++ D +V+V+D + GN + + ++D Sbjct: 1 MKLVVTGGAGYIGS-VCAKVLLDAGNEVIVVDDFS-TGNPEA---VPAGATVVEGRID-- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E I + L D +++FAA S V S+ E+ N++ + LL+ R Sbjct: 54 --EVIDATLAGNDVDGVLHFAARSLVGESMDVPHEYWRDNLVTSLALLDAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG + +ED P P++PY ATK + DY + ++ YG+ Sbjct: 104 -THRVPRLVFSSTAATYGEPETVPITEDAPTRPTNPYGATKLAIDYAITSYCQAYGLAAT 162 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIE-GSHVFLYG------DGQNVRDWLYV 226 ++ G H E LIPL + + + ++G DG VRD++++ Sbjct: 163 SLRYFNVAGAHGEIGENHKTETHLIPLVLQVALGYRDKIMIFGDDWPTKDGTCVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D A L L+ G +N+G G + R+ I++ E+ H Sbjct: 223 RDLADAHVLALESSAPGTHRIFNLGSGEGYSVREVIEVCREV-----------TGHPIPA 271 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S KI+ E+GW P Sbjct: 272 EVAPRRAGDPAVLIASSEKIQRELGWDPTRT 302 >gi|148264353|ref|YP_001231059.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146397853|gb|ABQ26486.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 311 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 146/331 (44%), Gaps = 34/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+ + +V+ +D + G+ ++ + + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLCGRLLREGH-EVICLDNF-FTGSKRNIARLFDNPGFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D + N A + + I T+++G + L Sbjct: 59 EPILL-------EVDRVYNLACPASPIHYQYNPVKTIKTSVMGAI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R LQ ST EVYG SE+ P S Y K ++ L++ + Sbjct: 102 AKRVRARILQASTSEVYGDPQVHPQSEEYWGNVNPIGIRSCYDEGKRVAETLMMDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + + N YGP +++ I + + G + +YG+G R + YV+D V + Sbjct: 162 GVDIRIIRIFNTYGPRMAVNDGRVVSNFIVQALRGEDITVYGEGMQTRSFCYVDDLVEGM 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ N+G E ++ I + S S +D P ++ Sbjct: 222 IRMMECEGFTGPVNLGNPTETTILEFARRI-----VALTGSKSRIVFNELPDDDP---KQ 273 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ K ++GW PQ ++E+GL KT+ ++ Sbjct: 274 RQPDISQAKEKLGWQPQVDVETGLKKTIDYF 304 >gi|297529157|ref|YP_003670432.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] gi|297252409|gb|ADI25855.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. C56-T3] Length = 359 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 27/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 ++++VTGGAGFIGS L L + L V +D Y+ + + +++ Sbjct: 46 LKIVVTGGAGFIGSHLAARL-SGLGYDVAAVDCFHPYYSAERKERQFQTLTGGRVPLVRL 104 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E + L EF+PD + + AA V SI +I +I T +L Sbjct: 105 DLLDGERTKRWLVEFRPDVVYHLAALPGVPYSIEKPLAYIDYDIKATVNVLA-------- 156 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYG 176 + + L S+ VYG E+M SPY+A K ++ A+ H YG Sbjct: 157 -AAGEAGAAHVLFASSSSVYGDRGNVPLREEMADGRVVSPYAAAKYGAESFCHAYAHLYG 215 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + YGP+ P+ I + R++ G + +YG G RD+ Y++D V Sbjct: 216 YQMTIFRYFTVYGPWGRPDMAIGTFLRRLLAGEEIVVYGKG-TARDYTYIDDIV------ 268 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRPGHDRRY 294 +G I + GG +E N+ + ++ L+ + H ++ + +R G + Sbjct: 269 --EGMIAALHRSGGRSEVFNLGAGAPV--TMEQLLAELRKHFPDMKNVHAPERKGDVKAT 324 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P+ GL +TV W Sbjct: 325 WADITKAERAFGYKPKVAFAEGLARTVAW 353 >gi|289648539|ref|ZP_06479882.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. aesculi str. 2250] Length = 331 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 42/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + + L +L I+V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVAKRLC-ELGIEVVGID------NLNDYYSVELKQSRLAILQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFNRLDITDAEGLSALFSHNEFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYSHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G + +NIG K ++ + D L E R Sbjct: 225 VESILRLRLLPPDTVGSEPPHQLFNIGRGQPVKLLEFI-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + G + D S + I + PQ ++++G+ V WY ++ Sbjct: 277 YLPLQAGDVLKTWADVSALSQWIDFQPQVSVDTGVRAFVDWYREH 321 >gi|2959983|emb|CAA10917.1| UDP-glucuronic acid epimerase [Sinorhizobium meliloti] Length = 341 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 122/240 (50%), Gaps = 19/240 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR ++TG AGFIG + + L+++ V+ D +T ++ +LKE + +SN F + Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHF-VVGFDGMTPYYDV-TLKERRHAILQRSNGFKAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR + A + +P+ I++ AA++ V S+ ++ N++G+ W Sbjct: 59 TAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L K + L + ST +YG+ +K F+E D P + Y+ATK S + + ++ H Sbjct: 109 NMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + + + G + +YG+G+ RD+ Y++D V ++ Sbjct: 169 LYKVPTTAFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESI 228 >gi|288920403|ref|ZP_06414713.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288348210|gb|EFC82477.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 319 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 22/226 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIG+ L R L+ +V+V+D L+ G ++L +S + + DRE Sbjct: 1 MTGGAGFIGAHLTRALLAR-GCEVVVVDDLS-TGARSNLAGLS----VKLVLGSVTDREL 54 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + A +IV+ A V+RS+L N GT +L+ ++ Sbjct: 55 MEEACTGAA--SIVHLAERPSVERSLLDPLATHHVNATGTLTVLDVA----------QRS 102 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 + + +S+ VYG D +E P P SPY+A+K +++ L ++G+PVL+ Sbjct: 103 ETHAVIVSSSAVYGDRDGRPCAESDPPWPCSPYAASKLAAEAYALGHQASFGLPVLVVRL 162 Query: 185 SNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 N YGPY +IP I + G + ++GDG+ RD+ YV Sbjct: 163 FNVYGPYQSARAAHAAVIPSFIDAALRGRPLNVHGDGRQTRDFTYV 208 >gi|209884477|ref|YP_002288334.1| UDP-glucuronate 5'-epimerase [Oligotropha carboxidovorans OM5] gi|209872673|gb|ACI92469.1| UDP-glucuronate 5'-epimerase [Oligotropha carboxidovorans OM5] Length = 339 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 47/348 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG + + L+ +V+ +D + Y L L + + F+F ++D Sbjct: 7 ILVTGAAGFIGFHVAQRLLQ-AGHEVIGLDNINDYYDPALKEARLAILKNARGFAFEKID 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR +R+ + + +++ AA++ V SI + +I +N+ G +LE R Sbjct: 66 LADRAAVRALFETHRFPLVIHLAAQAGVRYSIDHPNVYIDSNLQGFANILEGCR------ 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F S+ VYG+ K FSE D +P S Y+A+K +++ + + H YG+ Sbjct: 120 -HNGCEHLLF--ASSSSVYGANTKLPFSEHDSVNHPISLYAASKRANELMAHTYSHLYGL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + L ++ + L+ +G +RD+ YV+D A+ + Sbjct: 177 PATGLRFFTVYGPWGRPDMAMYLFANAIVADKPIRLFNNGDMLRDFTYVDDVTEAVVRLA 236 Query: 238 KKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 ++ RI YNIG N K +D+V A + + Sbjct: 237 QRPAKPNPAWNPEAPDPATSHAPWRI---YNIGNNKPEKLMDLV--------AAMERELG 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T + + G D ++ E+ + P + G+ + V WY Sbjct: 286 RTARKELLPMQAGDVYATYADIEDLRREVDFRPDTPLADGVARFVAWY 333 >gi|13476270|ref|NP_107840.1| nucleotide sugar epimerase [Mesorhizobium loti MAFF303099] gi|14027031|dbj|BAB53985.1| nucleotide sugar epimerase [Mesorhizobium loti MAFF303099] Length = 342 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/352 (23%), Positives = 151/352 (42%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQ-SNL- 51 M+++VTG AGFIG + R L+ + +V+ ID + L L E S+ SN Sbjct: 1 MKVLVTGAAGFIGYHVARRLL-ERGDEVVGIDSVNDYYDPRIKQARLRLLAEASRGSNAG 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 + F+ ++ +RE + + D +++ AA++ V S+ ++ +NI+ +LE Sbjct: 60 YHFIHGNLAEREIVDGCFADHDFDRVIHLAAQAGVRYSLENPRAYVESNIVAFTNMLEAC 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 R ST VYG+ FSE P + P Y+ATK +++ + + Sbjct: 120 R---------NAGMAHLTYASTSSVYGANTDMPFSEHRPADHPLQFYAATKRANELMAHS 170 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H +G+P YGP+ P+ + L ++ G + L+ +G + RD+ Y++D Sbjct: 171 YSHLFGLPTTGLRFFTVYGPWGRPDMALFLFTRSILAGEPIKLFNNGNHTRDFTYIDDIA 230 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + G +NIG NN K + + L AL Sbjct: 231 EGVIRASDSPAAGNPAWDSGHPDPATSSAPWRIFNIGNNNPVK---LTAYVEALESALGR 287 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ +I + + G D++ ++ +G+ P ++ G+ + V WY Sbjct: 288 KA-----VIELLPLQAGDVPDTFADTTALQEAVGYRPGTSVSDGVGRFVEWY 334 >gi|319784411|ref|YP_004143887.1| UDP-glucose 4-epimerase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170299|gb|ADV13837.1| UDP-glucose 4-epimerase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 359 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 143/328 (43%), Gaps = 46/328 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS C+ L + V V D L+ GN S+ + DI DR Sbjct: 6 VLVTGGAGFIGSHTCKQLAAAGYMPV-VFDNLSR-GNERSVA------WGPLVVGDIRDR 57 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +R A++ +P A+++FAA ++V S+ E+ +TN+ GT +L+ R S + Sbjct: 58 DALRRAMETHRPTAVIHFAALAYVGESVREPAEYYSTNVTGTIAVLDAAR--ASSIEN-- 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + S+ YG + E NP SPY TK + ++ + YG+ + Sbjct: 114 -----IIFSSSCATYGVPEALPVRETSSQNPISPYGRTKLMGEQIIGDYASAYGMKFAIL 168 Query: 182 -------SNCSNNYGPYHFPEK-LIP---LAITRMIEGSHVFL----YGDGQNVRDWLYV 226 ++ G +H PE L+P +A + +I+ VF DG VRD+++V Sbjct: 169 RYFNACGADPDGELGEWHSPETHLVPRVLMAASGIIDAIEVFGTDYDTSDGTCVRDYIHV 228 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D H++AL + GR N+G +IV +G + +P Sbjct: 229 TDLARAHLKALMHIEGGGR-SLAVNLGTGRGVSIKEIVKAVGRITSRPVPAV-------- 279 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 F R G D + +G+ P+ Sbjct: 280 FRSRRAGDPAELYADPGSAREHLGFVPE 307 >gi|126337317|ref|XP_001372103.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 388 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 58 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 115 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 116 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 158 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 159 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 218 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 219 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGTQTRAFQYVSDLVNGL- 277 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P +R Sbjct: 278 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QRR 329 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 330 KPDIQKAKLMLGWEPVVPLEEGLNKAIHYF 359 >gi|219685186|ref|ZP_03540006.1| hypothetical protein BGAFAR04_0477 [Borrelia garinii Far04] gi|219673282|gb|EED30301.1| hypothetical protein BGAFAR04_0477 [Borrelia garinii Far04] Length = 355 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 84/361 (23%), Positives = 160/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVND---------------LKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV + LK + ++ L + + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEEGHEVLGIDILNDYYELKFKNERLEALGFCPKDVKIYK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLKLFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R + K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRTY-------KENIKHFVYASTSSVYGINENIPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGEPINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVSDIANGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFIREL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDIVKLKNDVGYEAKISIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|118497804|ref|YP_898854.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. novicida U112] gi|194323776|ref|ZP_03057552.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. novicida FTE] gi|208779867|ref|ZP_03247211.1| UDP-glucose 4-epimerase [Francisella novicida FTG] gi|254373165|ref|ZP_04988654.1| hypothetical protein FTCG_00747 [Francisella tularensis subsp. novicida GA99-3549] gi|23506369|gb|AAN37762.1| galactose epimerase [Francisella novicida GA99-3549] gi|118423710|gb|ABK90100.1| UDP-glucose 4-epimerase [Francisella novicida U112] gi|151570892|gb|EDN36546.1| hypothetical protein FTCG_00747 [Francisella novicida GA99-3549] gi|194322140|gb|EDX19622.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. novicida FTE] gi|208744322|gb|EDZ90622.1| UDP-glucose 4-epimerase [Francisella novicida FTG] Length = 339 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKLSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +E A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LDKAKLTKVFQEHDIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K ++F+ S+ VYG +K F+EDMP + ++PY ATK + ++ Sbjct: 114 QEYK-VYKFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATKLMLEDILRD--------- 163 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 164 -LQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKAKRELGFETQKTIDDICQDMLKW 330 >gi|326486422|gb|ADZ76251.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 343 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 32/325 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILK---AKD 122 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 123 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRKGRISGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKIGNLSSVRTFQDCRDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 L+ +KG++ GE +NI G F++ ++D L+ +S + I+ +D Sbjct: 241 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILL--GFSIRKDIKVEQDEQR 291 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KIKS I W P+ Sbjct: 292 LRPIDADYQMFDNTKIKSFINWKPE 316 >gi|325276582|ref|ZP_08142325.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51] gi|324098291|gb|EGB96394.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51] Length = 310 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 33/325 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGS LC L+ D V ++D L+ GNL ++ L ++ D+ Sbjct: 6 ILITGGAGFIGSHLCDALL-DKGYAVRILDDLSTGRRGNL----QVDHPRL-ELIEGDVA 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A A+V+ AA + V S+ +N IGT + E R+ Sbjct: 60 DAALVMRAAAGC--SAVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHG----- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + S+ VYG+ +G +ED P P +PY+ K +S+ + + +G+ Sbjct: 113 ----LRRVVFASSAAVYGNNGEGESIAEDTPKAPLTPYAVDKLASEQYLDFYRRQHGLEP 168 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ N +GP P +I + R ++G + +YGDG+ RD+LYV D V+ + Sbjct: 169 VVFRFFNIFGPRQDPSSPYSGVISIFCERAVQGLPITVYGDGEQTRDFLYVGDLVQVMVQ 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L++ ++ E G N+ +I+ + A + K + + R G R Sbjct: 229 ALEQPQVEEGAVNIGLNQATSINQML-------AALQKVVGSLPAVTYAAARAGDIRHSR 281 Query: 296 IDSSKIKSEIGWFPQEN-MESGLNK 319 D+ ++ + FPQ M GL + Sbjct: 282 ADNQRLLARFA-FPQATPMVEGLAR 305 >gi|296114217|ref|ZP_06832872.1| UDP-glucose 4-epimerase [Gluconacetobacter hansenii ATCC 23769] gi|295979293|gb|EFG86016.1| UDP-glucose 4-epimerase [Gluconacetobacter hansenii ATCC 23769] Length = 327 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR VTGGAGF+GS +C + + +++++D L+ G+ +++ + ++ F++ + Sbjct: 1 MRYFVTGGAGFVGSHVCLEFL-EAGHEIVILDDLSI-GHRSAVPKGAR-----FIEGSVL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E I L + Q D +++FAA S V S+ E++ N +G F++++ +C+ Sbjct: 54 DSELINKVLSDGQWDGVLHFAALSLVGDSMRNPIEYMRNNGLGGFVIID------ACVRH 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW---GHTYGI 177 + RF+ ST ++ ++D L E+ +P+SPY +K + L W H+ Sbjct: 108 EIP---RFILSSTASLFSNMDDSLIDENCAIDPASPYGESKFVVER-ALHWADRAHSLKS 163 Query: 178 PVLL------SNCSNNYGPYHFPE-KLIPLAITRMIE-GSHVFLYG------DGQNVRDW 223 L ++ G H PE L+PL I ++ + L+G DG +RD+ Sbjct: 164 ACLRYFNAAGADPLGRLGEDHNPETHLLPLIIDAGLKRRPPLVLFGNDYPTPDGTCIRDY 223 Query: 224 LYVEDHVRA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 ++V D A L ++ YNIG N++++ + + +P S Sbjct: 224 IHVTDLASAHLDVMTSLNEKSVSYNIGTGQGHSNLELIHTVEKVTGIPVPWSVG------ 277 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 E R G + KIK E+ W P+ ++E+ + W + N +R Sbjct: 278 --ERRQGDPAILIANPEKIKKEVRWSPKYSDIETLIKHAYQWRVANPGGYR 326 >gi|227889617|ref|ZP_04007422.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|227849760|gb|EEJ59846.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] Length = 330 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R L+ + V+V+D L Y G+ ++ + + +F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRKLIEEGN-DVVVLDSL-YTGHRKAVDKRA-----TFYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTNLVSKILRDENIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAM--------D 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +ED P +P +PY TK + ++ + GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPKTLPITEDTPLDPINPYGETKMMMEKIMHWADNADGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAISGDGNFTIFGDDYDTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V++ + + +N+G N++I+ + IP + Sbjct: 225 QVEDLIDAHILALKHVMETNK-SDVFNLGTAQGYSNLEILEAAKKVTSIDIPYTIG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSSKARKVLGWKPKHENVDDVIATAWNWH 320 >gi|298243406|ref|ZP_06967213.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] gi|297556460|gb|EFH90324.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] Length = 309 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 25/327 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + + + +V V+D L G N Q+ LF + DI Sbjct: 1 MRILVTGGAGFIGSHIVDHYIAAGH-EVAVVDNLWSHGGGNLANLNPQAQLF---RADIT 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +P+ + + AA+ V S N+ G +L +C Sbjct: 57 DEESLAHIFDAVKPETVCHQAAQHSVVVSTKDPKLDAHVNVFGLLSILN------NCTRV 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + + S+ YG+ ED+ P SPY TK +++ + W G+ Sbjct: 111 GTR---KIIFASSGATYGTPMCLPVDEDVMQRPESPYGITKMVAEHYLRYWHEANGLTYT 167 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P +I + R + V + DG+ +D++YV D RA L Sbjct: 168 ALRYGNVYGPRQDPNGEAGVIAIFARRFLTHQPVRIDWDGEQSKDYVYVADVARANVQAL 227 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G E + I G E +++ +++ + P E++R RPG + + Sbjct: 228 TRGD-NEVFCI-GTGEAVSVNGIYKTLAAVTGYEP------EIVR-APKRPGDLYKSQFN 278 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 K + +GW P+ + E G+ T+ ++ Sbjct: 279 CGKAERLLGWKPEVSFEEGVRATLAFF 305 >gi|147677430|ref|YP_001211645.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146273527|dbj|BAF59276.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 313 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 146/333 (43%), Gaps = 34/333 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L LV +V V+D G++ +L+ + + + D+ + + Sbjct: 5 LVTGGAGFIGSNLAIALVEQGH-RVRVLDNFA-TGSIENLRPVFKE--IELYRGDLRNLD 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R + + + AA V RS+ L A+E NI GT + L+ Sbjct: 61 DVRRTAG--GAEVVYHLAALPSVPRSVADPLTANE---VNITGTLNVF---------LAA 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG+ + E MP P SPY+ TK + + + YG+ + Sbjct: 107 RDAGVRRVVYASSSSVYGNSEDLPKLETMPPRPMSPYAVTKLAGENYGRVFYELYGLETV 166 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP P +IP I +++G +YGDG+ RD+ YV+D VRA L Sbjct: 167 GLRYFNVFGPRQDPRSEYAAVIPRFIDALLKGRPPVIYGDGRQSRDFTYVDDVVRASILS 226 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G GE +NI + + LL L + + + + + RPG + A Sbjct: 227 SEAAGAAGEVFNIAAGHR-------ISLNELLAVLTEITGINGDAV-YAGARPGDVKHSA 278 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 K + +G+ P + GL TV W+ N Sbjct: 279 ACIEKASAILGYVPLTAFKDGLRMTVEWFARKN 311 >gi|150375823|ref|YP_001312419.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150030370|gb|ABR62486.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 348 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 37/331 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L++ +V+ +D + G ++ + + + F + DI D Sbjct: 31 ILVTGGAGFLGSHLCELLLS-AGHEVICLDNFS-TGLRRNIAPLKRYDTFRVIAHDIVDP 88 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + D I N A + + T +IG+ LL+ Sbjct: 89 -------IDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLA----------A 131 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R Q ST E+YG E + P S Y K ++ L + +G+ Sbjct: 132 RRGARIFQASTSEIYGDPQVHPQVESYWGNVNSFGPRSCYDEGKRCAETLFFDYQKVHGV 191 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 + N YGP P+ +++ I + ++G ++ +YGDG R + +V+D + + Sbjct: 192 ETKIVRIFNTYGPRMRPDDGRVVSNFIVQALKGENITIYGDGSQTRSFCFVDDLIDGFVR 251 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 L+ + N+G E F IG L D +I + S ++++R P D R+ Sbjct: 252 LMGSPASLTGPVNLGNPTE-------FTIGELADEVIRLTNSRSKIVRL--PLPVDDPRQ 302 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S E+GW P+ N+ GL +T+ ++ Sbjct: 303 RRPDISLATKELGWRPKVNLAEGLAQTIRYF 333 >gi|302185812|ref|ZP_07262485.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae 642] Length = 331 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 42/342 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + R L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVARRLC-ELGVEVVGID------NLNDYYSVELKQSRLAILQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDAEGLSTLFSQNTFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G + +NIG K ++ V D L E R Sbjct: 225 VESILRLRLLPPDAVGSEPPHQLFNIGRGQPVKLLEFV-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + G + D S + I + PQ ++++G+ V WY Sbjct: 277 YLPLQAGDVLQTWADVSALSQWIDFQPQVSVDTGVRAFVDWY 318 >gi|257061311|ref|YP_003139199.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 8802] gi|256591477|gb|ACV02364.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 8802] Length = 362 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 143/325 (44%), Gaps = 25/325 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R ++TG G GS L +L+ +V I + T N + + I +Q+ LF Sbjct: 6 RALITGITGQDGSYLSEFLLEQ-GYEVHGIIRRTSTFNTDRIDHIYVDPHDTQAKLFLHY 64 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L++ QP I N A+SHV S + + + +GT LLE R + Sbjct: 65 G-DLTDGTTLRRILEQVQPVEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY- 122 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q + RF Q + E++G + E P+ P SPY+ K + + + + +Y Sbjct: 123 ---QQRTGIEVRFYQAGSSEMFGKVQDIPQKETTPFYPRSPYACAKVYAHWQTVNYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + N+ P F + I AI R++ G+ LY G+ + RDW Y +D+VR Sbjct: 180 DLFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNLDSKRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPG 289 A++L+L++ + Y I E +I EI F L + Y + F E RP Sbjct: 240 AMWLMLQQQE-ADDYVI-ATGETHSIREFLEISFNYVNLKWEDY-----VAFDERYLRPA 292 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 D +K K ++ W P E Sbjct: 293 EVDLLIGDPTKAKEKLSWEPSVTFE 317 >gi|226942696|ref|YP_002797769.1| NAD-dependent epimerase/dehydratase [Azotobacter vinelandii DJ] gi|226717623|gb|ACO76794.1| NAD-dependent epimerase/dehydratase [Azotobacter vinelandii DJ] Length = 373 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 56/355 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKE------ISQS 49 M+++VTG AGFIG+ R L+ D +V+ +D N N +LKE ++ Sbjct: 1 MKVLVTGAAGFIGAHCVRRLLLDGH-EVVGLD------NFNDYYDPALKEDRVRWICREA 53 Query: 50 NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE 109 F ++D+ D + + +P+ +V+ AA++ V S+ ++ +N+ G +LE Sbjct: 54 GDFPLWRLDLGDADGVAGLFAAQRPEVVVHLAAQAGVRHSLSDPHAYVRSNLAGFLNILE 113 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLV 168 R ++ + S+ VYG+ S +D +P S Y+A+K +++ + Sbjct: 114 GCR---------RQPVQHLVYASSSSVYGANQHTPHSVQDNVDHPLSLYAASKKANELMA 164 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVE 227 ++ + +GIP YGP+ P+ + P+ R ++EG + L+ G++ RD+ Y++ Sbjct: 165 HSYSYLFGIPATGLRFFTVYGPWGRPD-MSPIQFARAIVEGRPLRLFNYGRHQRDFTYID 223 Query: 228 DHVRALYLVLKKGRIG------ER------------YNIGGNNERKNIDIVFEIGFLLDA 269 D V + +L + ER YNIGG+ D + Sbjct: 224 DIVEGVVRLLPQPPRSDPHWDRERPRAESSMAPWRLYNIGGHRPIALTDYI--------D 275 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + L + +PG D S+++ + G+ PQ ++E GL + V W+ Sbjct: 276 TLERHLGRKALRELLPLQPGDVLDTCADVSELQRDTGFQPQVSLEEGLARFVSWF 330 >gi|86740000|ref|YP_480400.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86566862|gb|ABD10671.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 360 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+ +V+ +D G ++ + + F L+ D+ + Sbjct: 4 RVVVAGGAGFLGSHLCDRLLA-RGAEVICVDNF-LTGRPGNIDHLRRHGGFRLLRRDVTE 61 Query: 62 RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + DA++NFA+ S VD L E ++ GT LL+ L + Sbjct: 62 PIDVTGPV-----DAVLNFASPASPVDYRALPL-ETLSVGASGTANLLD---LAY----- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + RFL ST EVYG E+ P P S Y K ++ L A T+ Sbjct: 108 --RKNARFLLASTSEVYGDPRVHPQPEEYWGHVNPIGPRSMYDEAKRFAEALTTAHRATH 165 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G + N YGP + + IP I + + G V + G+G+ R YV+D V + Sbjct: 166 GTSTGIIRIFNTYGPRMRADDGRAIPTFIAQALRGQAVTVAGEGRQTRSLCYVDDLVEGV 225 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L G N+G E ID + + A +P I F+ RP D Sbjct: 226 VRMLDSDLPGP-VNLGSPQEMTIIDAARLVVEVCGADVP--------ITFVP-RPQDDPT 275 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +GW P ++ GL +TV W+ Sbjct: 276 VRCPDITLAREALGWRPLVDVRDGLARTVAWF 307 >gi|209522918|ref|ZP_03271475.1| GDP-mannose 4,6-dehydratase [Arthrospira maxima CS-328] gi|209496505|gb|EDZ96803.1| GDP-mannose 4,6-dehydratase [Arthrospira maxima CS-328] Length = 342 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 25/323 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV-D 58 ++TG G GS L L+ + +V I + + + N + ++ I + N FL D Sbjct: 8 LITGITGQDGSYLSELLL-EKGYEVHGIIRRSSSFNTDRIEHIYKDPHNPNARLFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +R L+E +P I N A+SHV S + + T +G LLE R + Sbjct: 67 LTDGTTLRRILEEVKPVEIYNLGAQSHVRVSFDCPEYTVDTVGLGVLRLLEAIRDY---- 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 Q Q RF Q + E++G + + E P+ P SPY+ K + + + +YG+ Sbjct: 123 QQRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYGLF 182 Query: 178 ---PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 +L ++ S GP F + I A+ R+++G LY G+ RDW Y +D+VR + Sbjct: 183 ACNGILFNHESPRRGPT-FVTRKITRAVARIVKGMQKELYLGNLDAKRDWGYAKDYVRGM 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD 291 +++L+ + + + NE +I ++ F L Y ++F E RP Sbjct: 242 WMMLQHDQPDD--YVLATNETHSIREFLDVAFNYVNLDWHDY-----VKFDERYLRPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENME 314 DS+K ++ +GW P + E Sbjct: 295 ELLIGDSTKAQNVLGWKPLVSFE 317 >gi|307153081|ref|YP_003888465.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822] gi|306983309|gb|ADN15190.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822] Length = 315 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 26/326 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQVDI 59 IVTG AGF+GS L L+ + +V+ +D++ Y L +L+ +++ + F F++ DI Sbjct: 5 IVTGVAGFVGSHLAEALLTQGE-KVVGVDQVNDYYDPQLKRKNLQILNKYSDFEFIEADI 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWSCL 118 + + + + I + AA++ V S G + NI T I+LE Sbjct: 64 QALDWQKLLVD---VEVIYHQAAQAGVRASWGEGFRLYTERNINATQIILEA-------- 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ K R + ST VYG+ + E + P SPY TK +++ L + +G+P Sbjct: 113 AKEAKSLKRLVFASTSSVYGNAETLPTPETICPQPVSPYGITKLAAERLCWLYHQNFGVP 172 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 V YGP P+ + + +YGDG+ RD+ +V D + A L Sbjct: 173 VTALRYFTVYGPRQRPDMAFHKFFKAAMFDQAIPIYGDGEQTRDFTFVSDVIAANLAAGT 232 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +GE +NIGG + D++ +I + I + Y IE G R D Sbjct: 233 IPEAVGEVFNIGGGSRVVLTDVLAKIDEITGRPIRREY--------IEKAMGDARHTGAD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 ++K + +G+ PQ + GL + W Sbjct: 285 TTKAQKLLGYHPQVALTEGLTQEWEW 310 >gi|326486337|gb|ADZ76170.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] gi|326486361|gb|ADZ76193.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 358 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 80 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRI---LKAKD 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 137 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 195 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 196 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYY 254 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG++ GE +NI G F++ ++D L+ S + +R +ED Sbjct: 255 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 307 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+ KIKS I W Sbjct: 308 RPIDADYQMFDNGKIKSFIDW 328 >gi|206602026|gb|EDZ38508.1| UDP-glucose 4-epimerase [Leptospirillum sp. Group II '5-way CG'] Length = 316 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIGS L R L+ +V V+D + G +L E+ S ++ D+ Sbjct: 1 MRYLVTGGAGFIGSHLVRALLEKGH-EVRVLDNFS-TGKEENLAEL--SGRIDVIRGDVR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I AL+ + + AA V RSI + T N+ GT L LW Sbjct: 57 SFADIERALEGVT--FVFHQAAVGSVPRSIADPFDTQTANVNGTLNL-----LW------ 103 Query: 121 DKKDQF---RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K +F R + + VYG E + +P SPY+ +K S + + T+G+ Sbjct: 104 -KAKEFGVQRVVIAGSSSVYGDTPGMPRVETLLPSPLSPYALSKLSQELFGKIFSKTFGL 162 Query: 178 PVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP P +IP + +++ V + G G+ RD+ ++++ V+A Sbjct: 163 ETVTLRYFNIFGPRQDPRSEYAAVIPRFVRAILKKDAVTINGTGEQSRDFTFIDNVVQAN 222 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L ++ R IGE NIG + +++V + +L + P+ +R + R G Sbjct: 223 LLAMETTRGIGEAVNIGCGSSFSILELVDHLSEIL-GVRPE-------VRHLPPRAGDPM 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + +G+ P+ GL +T W+ Sbjct: 275 ASQADISKARDLLGYSPKVYFREGLERTARWF 306 >gi|16801682|ref|NP_471950.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] gi|16415157|emb|CAC97847.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] Length = 328 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 152/333 (45%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+N +V+V+D L G+ S+ + ++ F + DI Sbjct: 2 MSIVVLGGAGYIGSHAVDELINR-GYEVVVVDNLR-TGHKESIHKKAK-----FYEGDIR 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + ++ D++++FAA S V S+ E++ N+ GT +LLE Sbjct: 55 DKAFLSTVFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVM--------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP +P S Y TK + ++ YG+ Sbjct: 106 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGM 162 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 163 KFVALRYFNVAGAKADGSIGEDHKPETHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 222 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H+RAL LKKG +N+G +N F + +L+A + + Sbjct: 223 DYVQVEDLIDAHIRALEY-LKKGGESNIFNLGSSNG-------FSVKEMLEA--ARIVTG 272 Query: 278 TEL-IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 E+ + R G S K + +GW P Sbjct: 273 KEIPAEVVPRRAGDPGTLVASSDKAREILGWQP 305 >gi|190894616|ref|YP_001984909.1| GDP-mannose 4,6-dehydratase [Rhizobium etli CIAT 652] gi|190700277|gb|ACE94359.1| GDP-mannose 4,6-dehydratase protein [Rhizobium etli CIAT 652] Length = 363 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 28/282 (9%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 67 DMTDSTNLIRVIQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 123 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 181 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQEKLYLGNLDAKRDWGHAREYVRG 239 Query: 233 LYLVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLLD----ALIPKSYSHTELIRFIE 285 ++L+L++ G+ G R +D F ++G +D + K Y T +E Sbjct: 240 MWLMLQQDEPGDYVLATGETHSVRSFVDKAFAKVGMPIDWRGSGVEEKGYDKTSGQCVVE 299 Query: 286 DRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVC 322 P + R + D +K +++GW E+ L++ V Sbjct: 300 IDPTYFRPTEVDLLIGDPTKAHTKLGW----KHETSLDQLVA 337 >gi|60682079|ref|YP_212223.1| DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] gi|60493513|emb|CAH08300.1| DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] Length = 339 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 33/345 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGG GFIGS L ++ + ++ V+D L G+ +L + F + DI Sbjct: 1 MRYLVTGGCGFIGSNLAAEVLKQGE-ELFVLDNLFRFGSAANLAWLHTLGEFKYYPFDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-------L 113 + + + +KE QPD I + A + + SI TN +GTF LL+ R + Sbjct: 60 NNNDVETVVKEAQPDYIFHLAGQVAMTTSISNPRLDYETNALGTFNLLDAVRKYSPNSVI 119 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDK--GLFSEDMPYNPSSPYSATKASSDYLVLAW 171 +S ++ D F +L ++ + ++ F E + + SPY +K +D +L + Sbjct: 120 LYSSTNKVYGD-FEYLHFMEEQTRYTCEEYPNGFPESISLDFHSPYGCSKGCADQYLLDF 178 Query: 172 GHTYGIPVLLSNCSNNYGPYH-----------FPEKLIPLAITRMIEGSHVFLYGDGQNV 220 YG+ ++ S+ YG F +K + + + + E + G G+ V Sbjct: 179 YRIYGLKTIVFRHSSMYGNNQHATYDQGWIGWFCQKALEIKNSTLKEPFTI--SGTGKQV 236 Query: 221 RDWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 RD L+ D V LY K R G+ +NIGG E N + E+ +L+ + +T Sbjct: 237 RDVLHGNDVVN-LYFKAKDVRQAYGQVFNIGGGIE--NSLSLLELFDMLERKLNIKMIYT 293 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +L R + + D K+ +GW P+ + + G+ + W Sbjct: 294 QLPW----RESDQKVFVADIQKVSKVVGWIPEVSKDQGIQLMINW 334 >gi|116671230|ref|YP_832163.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] gi|116611339|gb|ABK04063.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] Length = 364 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/358 (24%), Positives = 151/358 (42%), Gaps = 54/358 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIG A+ LVN+ +V+V+D L + + + + D+ + Sbjct: 14 VLVTGGAGFIGCAISDALVNEFD-RVVVVDNLHPQIHATGQRPEQLNAAAELVVADVTEA 72 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L++ PD +++ AAE+ +S+ + N++GT LL+ L++ Sbjct: 73 KTWDTVLQDVTPDVVIHLAAETGTGQSLEESTRHAHVNVVGTSQLLD-------GLNRHG 125 Query: 123 KDQFRFLQISTDEVYG--------------------SLDKGLF------------SEDMP 150 K R + S+ VYG +LDK + SE P Sbjct: 126 KLPRRIVLSSSRAVYGEGAWKDAHGRVFYPGQRTSETLDKAQWDFPDASPVAMKASETFP 185 Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRM-I 206 P S Y ATK + + ++ AW +YG+ ++ N YGP P I RM + Sbjct: 186 A-PVSVYGATKLAQENVLQAWAKSYGVETVILRLQNVYGPGQSLINPYTGIMSLFCRMAM 244 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGF 265 G + LY DG+ RD++ ++D A+ + E +I G+ E + I + Sbjct: 245 GGKSIPLYEDGEVRRDFILIDDVASAIVAGAVSTTVQAEPMDI-GSGEFQTIGTAAK--- 300 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 LI + Y + R G R D + + +GW P+ N+ G+ + W Sbjct: 301 ----LIAEHYKAPASHVTGQYRQGDVRHAWADITAAEKVLGWTPKYNLAQGIERLATW 354 >gi|111225106|ref|YP_715900.1| dTDP-glucose 4-6-dehydratase [Frankia alni ACN14a] gi|111152638|emb|CAJ64379.1| DTDP-glucose 4-6-dehydratase [Frankia alni ACN14a] Length = 346 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R IVTGGAGF+GS LC L+ D +V+ D G ++++ + F + D+ Sbjct: 31 VRAIVTGGAGFLGSHLCERLLGD-GYEVICFDNF-LTGRPDNVEHLLVDPRFRLVNRDVN 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +++FA+ + E + +GTF L Sbjct: 89 DFIYVSGPV-----DVVLHFASPASPLDYYELPIETLKVGSLGTF----------HALGL 133 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 ++ + RFL ST E YG E P P S Y K ++ + +A+ + Sbjct: 134 AREKRARFLLASTSESYGDPQVNPQPETYWGNVNPVGPRSVYDEAKRFAEAVTMAYRRKH 193 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP + + IP +++ + G + + GDG R YV+D + + Sbjct: 194 GVDTAIVRIFNTYGPRMRVDDGRAIPAFVSQALRGEPITVAGDGSQTRSICYVDDLIDGI 253 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L G NIG +E +D + L + P I F+ RP D Sbjct: 254 LRLLHSDLPGP-VNIGNPHEMSILDTAKLVRDLCGSTAP--------ITFVP-RPQDDPS 303 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++ +GW P+ ++ GL +T+ W+ Sbjct: 304 VRQPDITIARTRLGWEPRTSLHDGLTRTISWF 335 >gi|34810285|pdb|1ORR|A Chain A, Crystal Structure Of Cdp-Tyvelose 2-Epimerase Complexed With Nad And Cdp gi|34810286|pdb|1ORR|B Chain B, Crystal Structure Of Cdp-Tyvelose 2-Epimerase Complexed With Nad And Cdp gi|34810287|pdb|1ORR|C Chain C, Crystal Structure Of Cdp-Tyvelose 2-Epimerase Complexed With Nad And Cdp gi|34810288|pdb|1ORR|D Chain D, Crystal Structure Of Cdp-Tyvelose 2-Epimerase Complexed With Nad And Cdp Length = 347 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 45/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TGG GF+GS L + ++ I ++V D L+ G ++L +S F F+ DI + Sbjct: 3 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + ++ PD+ + A + + SI N+ GT LLE R + S Sbjct: 62 KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS----- 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASSD 165 + ST++VYG L++ ++E D P Y+ S SPY +K ++D Sbjct: 117 ---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIE-----GSHVFLYGDG 217 +L + +G+ ++ S+ YG F + + + +E + G+G Sbjct: 174 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 233 Query: 218 QNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + VRD L+ ED + + L +I G +NIGG IV + L + + Y Sbjct: 234 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-------IVNSLSLLELFKLLEDY 286 Query: 276 SHTELIRF--IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + ++ RF + R R + D KI + I W P+ + + G+ K W Sbjct: 287 CNIDM-RFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW 335 >gi|292490696|ref|YP_003526135.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] gi|291579291|gb|ADE13748.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] Length = 336 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 152/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+++VTG AGFIG+AL L+ +++ +D L Y NL L F+ + Sbjct: 1 MKIMVTGSAGFIGAALTEKLLKRGD-EIIGVDNLNDYYDVNLKLARLARFQDQPAFTEAR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + +RE + + + +P +VN AA++ V S+ ++ +N+ G +LE R + Sbjct: 60 MGLENREALNTVFAKHRPQRVVNLAAQAGVRYSLENPHAYVDSNLQGFLNILENCRHY-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F S+ VYG+ K +S D +P S Y+A+K +++ + + H Y Sbjct: 118 -----QVEHLVF--ASSSSVYGANTKMPYSVHDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV YGP+ P+ + ++ G + +Y G + RD+ Y++D V + Sbjct: 171 QLPVTGLRFFTVYGPWGRPDMALFKFTRNILAGRPIDVYNYGHHQRDFTYIDDIVEGVIR 230 Query: 236 VLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L + G + YNIG + + D + + L K+ Sbjct: 231 TLDRLPTPNSNWNGAAPDPSTSTAPYRLYNIGNHQPVELSDFIKTLEECLGCEAKKN--- 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG D + ++G+ P +E G+ + V WY D Sbjct: 288 -----LLPMQPGDVPATYADVDDLMRDVGFHPATPIEQGIARFVTWYKD 331 >gi|302551995|ref|ZP_07304337.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] gi|302469613|gb|EFL32706.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] Length = 320 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 52/336 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++L+ + + +V+D L+ +E + +F++ DI Sbjct: 4 KYLVTGGAGYVGSVVAQHLL-EAGHEAVVLDNLS-----TGFREGVPAGA-TFIEGDI-- 54 Query: 62 RECIRSALK--EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 R A K + D +++FAA S V S+ +++ N+ GT LL R Sbjct: 55 ----RDAAKWLDSSYDGVLHFAAFSQVGESVAKPEKYWDNNVAGTMALLAAMR------- 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + D + ST YG D+ E P +P++PY ATK + D+++ +G+ Sbjct: 104 --EADVRTLVFSSTAATYGEPDEVPIVESAPTSPTNPYGATKLAVDHMITGEAAAHGLGA 161 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 + ++ +G H PE LIPL + ++ +G + ++G DG VRD++ Sbjct: 162 VSLRYFNVAGAYGEHGERHDPESHLIPL-VLQVAQGRRDSISVFGEDYATPDGTCVRDYI 220 Query: 225 YVEDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 +V D A L LK GE N+G N +++ + + IP+ Sbjct: 221 HVADLAEAHLLALKAATPGEHLICNLGNGNGFSVREVIETVRRVTGHPIPE--------- 271 Query: 283 FIEDRPGHDRRYAIDSSKIKSE-IGWFPQENMESGL 317 + R G D + S+ E +GW P +G+ Sbjct: 272 VVAPRRGGDPAVLVASAATAREKLGWNPSRADLAGI 307 >gi|282896292|ref|ZP_06304314.1| UDP-glucose 4-epimerase [Raphidiopsis brookii D9] gi|281198788|gb|EFA73667.1| UDP-glucose 4-epimerase [Raphidiopsis brookii D9] Length = 363 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 153/326 (46%), Gaps = 41/326 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + L+ D VLV+D L Y G+ + ++++ Q L +Q DI D Sbjct: 39 VLVTGGAGYIGSHAVKALLQD-GYHVLVLDNLAY-GHRDLVQQVLQVEL---IQGDIQDT 93 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S + ++ +++F+A ++V S++ ++ N+ T LL ET L + Sbjct: 94 PLLNSIFQRYKVGVVMHFSAYAYVGESVVNPAKYYRNNVAATLSLL-ETMLEYGI----- 147 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 +F+ ST YG +E+ P NP +PY ATK + ++ + YG+ + Sbjct: 148 ---NKFIFSSTCATYGVPQFIPLTEEHPQNPINPYGATKLMVERILSDFDVAYGLKSVSF 204 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ + G H PE LIPL + T + + S + ++G DG +RD+++V Sbjct: 205 RYFNAAGADPTGILGEDHNPETHLIPLILQTALGQRSSISIFGTDYPTPDGTCIRDYIHV 264 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L L+ +G +N+G N V E+ + + K+ TE R Sbjct: 265 TDLATAHILGLEYLLQGGTSTVFNLGNGNGFS----VREVIAAAEEVTGKNIPITECDR- 319 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 RPG S K + +GW P Sbjct: 320 ---RPGDPPILIGSSEKARKILGWQP 342 >gi|229917103|ref|YP_002885749.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sp. AT1b] gi|229468532|gb|ACQ70304.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sp. AT1b] Length = 342 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 80/340 (23%), Positives = 153/340 (45%), Gaps = 30/340 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQVDI 59 ++VTG AGFIG L R L+ + V+ ID + Y L + + F + + Sbjct: 5 VLVTGVAGFIGFHLARRLLKEGH-HVIGIDVVNDYYDPRLKESRLHVLTHPRFKLYRDAL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ I ++ QP +VN AA++ V S+ D +I +NI+G +LE R + Sbjct: 64 ENKMAITRVFEKNQPQVVVNLAAQAGVRYSLENPDAYIQSNIVGFLNILEACRFYPVE-- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGIP 178 + + S+ VYGS FSE P + P S Y+A+K +++ + + H +G+ Sbjct: 122 -------QLIYASSSSVYGSNQAMPFSEQHPVDHPLSLYAASKKANELMAHTYSHLFGLK 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + YGP+ P+ + +++G + +Y G+ RD+ Y++D + ++ ++ Sbjct: 175 TTGLRFFSVYGPWGRPDMALYKFTEAILKGEPIDVYNYGEMERDFTYIDDIIESIVRLMD 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI-- 296 + + + D+ F + + + + S + IR IE+R G ++ Sbjct: 235 IAPMADEEFDYEHPLPDRSDVPFRVYNIGNQ---QPVSLMDFIRTIEERVGKKAILSLLP 291 Query: 297 -----------DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 DSS + I + PQ ++ G+N + WY+ Sbjct: 292 LQAGDVPASFADSSSLYESIDFQPQTSIRDGVNAFIDWYI 331 >gi|15077442|gb|AAK83169.1|AF333038_11 putative UDP-glucose 4-epimerase [Streptomyces viridochromogenes] Length = 322 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 134/333 (40%), Gaps = 44/333 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAGFIGS + + + +V V+D LT G+ L + +VD+ D Sbjct: 12 RLLVTGGAGFIGSHVVDAFL-EAGAEVTVLDDLT-TGDPERLDPRAV-----IRRVDVTD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A++ +PD I + AA+ V S+ N+ GT +LE Sbjct: 65 AAALDEAVRSARPDVICHLAAQIDVRVSVATPAVDARVNVEGTINVLEAAH--------- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY--------NPSSPYSATKASSDYLVLAWGH 173 + V+ S L+ E +P P +PY K ++ + + Sbjct: 116 --------AVGARVVFASTGGALYGEGVPVPTNEDTLPRPGAPYGTAKYCAEKYIGLFNR 167 Query: 174 TYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 +G + N YGP P +I + EG ++GDG RD++YV D Sbjct: 168 LHGTEHSVLRLGNVYGPRQSPGGEAGVIAIYCGLASEGGVPTVFGDGSQTRDYVYVGDVA 227 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A V G +G G ++ V E+ LD + S RF RPG Sbjct: 228 AAF--VAPYGTVGPAS---GTSDTGKGSTVLEV---LDHIAAASGRDLPP-RFAPRRPGE 278 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + +D +++ +++GW +E G+ T W Sbjct: 279 IQHSTLDVTRVAADLGWTASVPLEKGIAATYAW 311 >gi|281416898|ref|ZP_06247918.1| UDP-glucose 4-epimerase [Clostridium thermocellum JW20] gi|281408300|gb|EFB38558.1| UDP-glucose 4-epimerase [Clostridium thermocellum JW20] gi|316941054|gb|ADU75088.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 1313] Length = 329 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 51/350 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS LV + K +V+V+D L G+ +++ + D+ Sbjct: 1 MAVLVTGGAGYIGSHTVAELV-EKKEEVIVVDNLE-KGHRDAVAGAK------LIVGDLR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E ++ E +A+++FAA V S+ ++ N+I T LL + + + Sbjct: 53 DKEFVKKVFLENDIEAVIHFAAYIEVGESVQNPLKYYNNNVIATLNLL-------TAMEE 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D+ F ST YG + E P++PY TK + + + YGI + Sbjct: 106 AKVDKIVFS--STAATYGEPENIPILETDRTLPTNPYGETKLAVEKALKWCDRAYGIKYI 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL I + + + ++G DG +RD++ Sbjct: 164 ALRYFNASGAHESGEIGEDHSPESHLIPLVIQAALGKRESIKIFGNDYNTPDGTCIRDYI 223 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L++ R G+ YN+G GF + +I T Sbjct: 224 HVSDLANAHYLALQRLREGKESAVYNLGNGK-----------GFSVKEVIDVVRKVTGRP 272 Query: 282 RFIED---RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 +ED RPG S KIK E+ W P+ ++E+ ++ W+L + Sbjct: 273 IKVEDAPRRPGDPAVLVASSEKIKKELNWQPRMADLETIVSTAWKWHLSH 322 >gi|88603383|ref|YP_503561.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] gi|88188845|gb|ABD41842.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] Length = 313 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 26/331 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS L + L +V+++D L +G L ++ ++ + + F++ I + Sbjct: 4 RYLVTGGAGFIGSHLSQALAARGD-RVIILDSLD-SGKLCNISDLLEDDHVEFIEDTILN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + S D I + AA V RSI NI G F + E RL Sbjct: 62 GSRLVSLCNGI--DGIFHLAALVSVQRSIDDPRLNHRINIDGLFEVFEAARLARVP---- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + S+ +YG+ E P SPY+ K S+ + YG+ + Sbjct: 116 -----KIVLASSAALYGNDYLPPHKETFASVPLSPYAVGKCLSELYAAVYTDLYGVHSVC 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P I++ ++ ++GDG+ RD++YV D V+AL L + Sbjct: 171 LRFFNVYGPKQDPSSPYSGVISKFMDAISRDDGFTIFGDGEQTRDFVYVLDVVQALILSM 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +K G +N+G I L ++ S IR+++ R G R D Sbjct: 231 EKSVSGV-FNVGTGAS-------VSINHLARTIMEVSGKKVG-IRYLDARDGEVRHSCAD 281 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 SKI +G+ P ++ GL++T W+++ Sbjct: 282 ISKISDGMGYKPGYSLIEGLSETYSWWIEKQ 312 >gi|324521914|gb|ADY47954.1| Rhamnose biosynthetic enzyme 2 [Ascaris suum] Length = 220 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 16/196 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDI 59 R +VTGG GFIGS Y+ + + + DKL + + +E+ S + + DI Sbjct: 6 RALVTGGCGFIGSNFINYIFHVWPDVHFVNCDKLILNSDACYVDEEVRSSERYQLVTADI 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + E +R L E + D +V+FAA+ R E + N+I LL+ R + + Sbjct: 66 RNSEVVRRILNENKIDTVVHFAADCTSTRCYGDPIESVENNVIAFIKLLDAVREYGAVK- 124 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 RF+ ISTDEVYG D KG ED P +PY+ATKA+ + + Sbjct: 125 -------RFIHISTDEVYGDSDLSEDEKGKL-EDSLLLPGNPYAATKAACESYAHMYRQQ 176 Query: 175 YGIPVLLSNCSNNYGP 190 +GIP+++ +N YGP Sbjct: 177 FGIPIVILRINNIYGP 192 >gi|226321753|ref|ZP_03797279.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi Bol26] gi|226232942|gb|EEH31695.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi Bol26] Length = 355 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 160/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKTINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV+D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVDDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|330837996|ref|YP_004412576.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|329745760|gb|AEB99116.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 310 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 36/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS L R+L+ + +V +D L+ N E +++DI Sbjct: 1 MNILVTGGAGFIGSHLVRHLLAKGE-KVTALDNLSTGLAENLPPEAK------LVEMDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + DAIV+ AA++ VD SI N++GT +LE R Sbjct: 54 D-EDLPKVVAAGAFDAIVHLAAQTMVDTSIKNPLLDTRENLMGTVQVLEAAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST YG + D E P P S Y +K S + + + YG+ Sbjct: 105 -AANVKRVIFASTAAAYGDVKEDDLPVREAQPTEPMSFYGLSKLSVEKYLEMYRKIYGME 163 Query: 179 VLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ +N YG +I + + EG + +YGDG+ RD++Y D + Sbjct: 164 YVVLRFANVYGERQGDGGEGGVISIFAKAVAEGRDITIYGDGEQTRDFVYAGDIAEGILA 223 Query: 236 VLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L+ + YN+ E R+ + ++ EI ++PK + +R G Sbjct: 224 ALRTEEVNAAYNLSTQTETSLRELVSLLAEI--CGREIVPK---------YGAEREGDIY 272 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +S+ + + W P + GL +T ++ Sbjct: 273 KSMLSNSRARRGLDWQPATTLAEGLRRTYEYF 304 >gi|309274624|gb|ADO64248.1| WcvA [Vibrio vulnificus] Length = 346 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 42/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSN-LFSFLQV 57 M+ +VTG AGFIGSA L N +V+ ID L Y NL + N LF F V Sbjct: 13 MKYLVTGAAGFIGSATAEKL-NAAGHEVVGIDNLNDYYDVNLKHARLARIENPLFKFASV 71 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + D +++ AA++ V S+ + +N++G +LE R Sbjct: 72 DIADRGAMEQLFATEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR----- 126 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q+K + + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 127 --QNKVNHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYD 182 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I +G + + +G RD+ +V+D V + Sbjct: 183 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILDGDTIDINNNGDMWRDFTHVDDIVEGVVR 241 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D V I L K+ Sbjct: 242 IADVLPTRNESWTVESGTPASSSAPYSVYNIGHGSPINLMDFVKAIEDELGIEAKKN--- 298 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E +PG + D+ + + G+ P+ ++ G+ + V WY Sbjct: 299 -----FREMQPGDVYQTYADTEDLFTATGYKPRVTVKEGVAEFVSWY 340 >gi|217977352|ref|YP_002361499.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] gi|217502728|gb|ACK50137.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] Length = 337 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 16/245 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQ 56 MR++VTG AGFIG + L+ D +V+ +D T Y L + +SQ+ F+ Sbjct: 1 MRILVTGSAGFIGFHMAARLLADGH-EVVGVDGFTHYYDPELKRRRNAILSQNPYFTSHA 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + D ++ + + DA+ +FAA++ V S+ ++ N+ G F LLE R Sbjct: 60 ILLEDASALKR-VYDAGFDAVYHFAAQAGVRYSLENPRAYVDANLTGAFNLLELMR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + L ST VYG+ K F E D +P + Y+ATK +++ + ++ H + Sbjct: 115 -----EAPPKHALMASTSSVYGANTKIPFHETDRADHPLTFYAATKKANEEMAHSYAHLF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IPV + YGP+ P+ + + M+EG + ++ G+ RD+ +V D V A+ L Sbjct: 170 KIPVTMLRFFTVYGPWGRPDMALFKFVDAMVEGRPIDVFNHGKMKRDFTFVGDLVEAMAL 229 Query: 236 VLKKG 240 ++ K Sbjct: 230 LIDKA 234 >gi|305663844|ref|YP_003860132.1| NAD-dependent epimerase/dehydratase [Ignisphaera aggregans DSM 17230] gi|304378413|gb|ADM28252.1| NAD-dependent epimerase/dehydratase [Ignisphaera aggregans DSM 17230] Length = 326 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 29/331 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 ++IVTGGAGFIGS + Y+VN L +V+VID L+ +G+LN++ F F+ D+ Sbjct: 7 KVIVTGGAGFIGSHIVDYIVNHRLSAKVVVIDNLS-SGSLNNISSHIGQEYFEFINADLK 65 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D RS + D +++ AA V S++ + NI+ TF +LE +R++ Sbjct: 66 KFDELWTRSFR---EADLVIHMAANPEVRLSVVNPEIHFNENILATFNVLEASRIY---- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGI 177 D + S+ VYG ED P P S Y K ++ L + + YG+ Sbjct: 119 -----DVKIGVFASSSTVYGDAKIIPTPEDYHPLEPISVYGGAKLCAEVLYITYSKLYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 L+ +N GP +I + + + + GDG + +L+V D V A + Sbjct: 174 KSLILRYANIIGPRSNHGVIIDFINKLKKDPTKLEILGDGTQRKSYLHVYDAVDATMFLT 233 Query: 238 KK--GRIG--ERYNIGGNN---ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 K G + E +N+G + ++ DIV E L + Y + R PG Sbjct: 234 TKLYGALKDYEIFNVGNEDWITVKEIADIVVEEMNLKNV----EYIYKLTTRDGRGWPGD 289 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + +D K+KS +GW P + KTV Sbjct: 290 VKLMLLDIRKLKS-LGWTPSMTSAQAVRKTV 319 >gi|254419462|ref|ZP_05033186.1| NAD dependent epimerase/dehydratase family [Brevundimonas sp. BAL3] gi|196185639|gb|EDX80615.1| NAD dependent epimerase/dehydratase family [Brevundimonas sp. BAL3] Length = 324 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL-----F 52 ++VTG AGFIG L+ D V+ +D N N +LK+ + L F Sbjct: 5 ILVTGAAGFIGMHTAERLL-DRGETVIGVD------NFNDYYDPALKDARAARLEAREGF 57 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + ++ DI D E + + +++ + IV+ AA++ V SI + +N+ G +LE R Sbjct: 58 TMVRADIADHERMLALVRDHGVERIVHLAAQAGVRYSIENPFAYERSNLAGHLSMLEAAR 117 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPY-NPSSPYSATKASSDYLVL 169 + S+ VYG L+ F ED P +P S Y+ATK S + L Sbjct: 118 ---------HNGVKHLVYASSSSVYGDRPLEGSGFREDDPTTDPVSLYAATKRSCELLSQ 168 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVED 228 ++ YG P YGP+ P+ + + TR I G + +YG+G+ RD+ Y++D Sbjct: 169 SYAKLYGFPQSGLRFFTVYGPWGRPD-MAYFSFTRKIARGEAIEVYGEGEMARDFTYIDD 227 Query: 229 HVRALYLVL--KKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V + VL + G E YNIG + + ++ I L DAL ++ +++R ++ Sbjct: 228 IVDGIVGVLDHPPAQGGHEIYNIG---DSSPVGLMEMITTLEDALGAEA---DKVMRPMQ 281 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG D SK+ + G+ P+ + GL + V W+ Sbjct: 282 --PGDVTATYADVSKLNALTGYKPKVTLAEGLPRFVKWW 318 >gi|154415493|ref|XP_001580771.1| NAD dependent epimerase/dehydratase family protein [Trichomonas vaginalis G3] gi|121914992|gb|EAY19785.1| NAD dependent epimerase/dehydratase family protein [Trichomonas vaginalis G3] Length = 313 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 36/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ + QV V+D L + G L ++K+ + F F+Q D+ D Sbjct: 6 RVLVTGGAGFVGSHLVARLM-EQGCQVTVLDNL-FTGRLENIKQFLDNPRFKFIQADVID 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I + A + + + T + GT +L+ L+Q Sbjct: 64 P-------IDIPVDKIFHLACPASPPAYMKDPVHTLETCVTGTHNMLK--------LAQ- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K R L ST EVYG + SE S Y K +++ L +G G Sbjct: 108 -KYNARMLYTSTSEVYGDPLEHPQSEKYWGHVNCRGIRSCYDEGKRAAETLCFEYGRK-G 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P+ +++ I + ++G + +YG G R + YV D V L Sbjct: 166 VWIRTARLFNTYGPNMDPKDGRVVSNFIMQALQGQDLTIYGTGDQTRSFTYVSDTVAGL- 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L L I NIG +E F I + L+ + + I ++E R+ Sbjct: 225 LALIDSNIKGACNIGNPHE-------FTIKQFAE-LVQQRVNQNVKIIYMEKAADDPRQR 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K ++GW P+ +E GL+ T+ ++ Sbjct: 277 KPDITKAMRKLGWEPKVMLEQGLDPTIAYF 306 >gi|114049463|ref|YP_740013.1| UDP-glucuronate 5'-epimerase [Shewanella sp. MR-7] gi|113890905|gb|ABI44956.1| UDP-glucuronate 5'-epimerase [Shewanella sp. MR-7] Length = 335 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L +V+ ID L L L + N F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCAQGH-EVVGIDNLNDYYDVGLKLARLAPLETLNNFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + E +++ AA++ V S+ + +N++G +LE R Sbjct: 60 LDLADRDGIAALFAEQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGDTIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGE---RYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 V K R G VF IG LLD + + + +F+ Sbjct: 231 VQDKPPRPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALESALGIEAKKQFLP 290 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D+ + +G+ PQ ++ +G+++ V WY Sbjct: 291 MQPGDVHSTWADTEDLFKAVGYKPQVDINTGVSRFVEWY 329 >gi|261418303|ref|YP_003251985.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|261374760|gb|ACX77503.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] Length = 367 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 31/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 ++++VTGGAGFIGS L L + L V +D Y+ + + +++ Sbjct: 54 LKIVVTGGAGFIGSHLAARL-SGLGYDVAAVDCFHPYYSAERKERQFQTLTGGRVPLVRL 112 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E + L EF+PD + + AA V S+ +I +I T +L Sbjct: 113 DLLDGERTKRWLVEFRPDVVYHLAALPGVPYSLEEPLAYIDYDIKATVNVLA-------- 164 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKG---LFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + L S+ VYG D+G L E + SPY+A K ++ A+ H Sbjct: 165 -AAGEAGAAHVLFASSSSVYG--DRGNVPLREEMVDGRVVSPYAAAKYGAESFCHAYAHL 221 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG + + YGP+ P+ I + R++ G + +YG G RD+ Y++D V Sbjct: 222 YGYQMTIFRYFTVYGPWGRPDMAIGTFLRRLLAGEEIVVYGKG-TARDYTYIDDIV---- 276 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRPGHDR 292 +G I + GG +E N+ + ++ L+ + H ++ + +R G + Sbjct: 277 ----EGMIAALHRSGGRSEVFNLGAGAPV--TMEQLLAELRKHFPDMKIVHAPERKGDVK 330 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P+ GL +TV W Sbjct: 331 ATWADITKAERAFGYKPKVAFAEGLARTVAW 361 >gi|330873331|gb|EGH07480.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967160|gb|EGH67420.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 38/342 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL-KEISQSNLFSFLQVDIC 60 +++VTG GF G C +L + I V SL +E+ N + DIC Sbjct: 15 KVLVTGHTGFTGGWACLWLKS---IGAHVAGYSLAPETTPSLFEELGLENDVDSVLGDIC 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + A++ FQPD I++ AA+ V RS + N GT +LE RL Sbjct: 72 DFDKLLQAVEAFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARL------- 124 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 K L ++TD+VY + + + E+ P PYSA+KA+++ ++ ++G +Y Sbjct: 125 -VKSVRGVLCVTTDKVYKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASYPFSQ 183 Query: 176 --GIPVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVR 231 G + + N G + E +LIP + + EG + L Y D R W +V V Sbjct: 184 GLGPAIATARGGNIIGGGDWSEDRLIPDFVRAVNEGQVMTLRYPDA--TRPWQHVLALVH 241 Query: 232 ALYLVLKK------GRIGERYNIGGNNERK-NIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++L + GR+ + +N+G ++ ++ V E L+ + L F+ Sbjct: 242 GYLVILAELLSENPGRVAKAWNLGPQELKQYSVRDVLE-------LMSADWQRPNL-EFM 293 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ A+DSS ++++ W P N E + KT WY D Sbjct: 294 DNPLPEAGALALDSSIARNQLNWIPVWNTEEVVEKTASWYRD 335 >gi|297266706|ref|XP_001111155.2| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Macaca mulatta] Length = 497 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 167 RILVTGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 224 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 225 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 267 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 268 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 327 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 328 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 386 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 387 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 438 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 439 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 468 >gi|269839235|ref|YP_003323927.1| UDP-glucose 4-epimerase [Thermobaculum terrenum ATCC BAA-798] gi|269790965|gb|ACZ43105.1| UDP-glucose 4-epimerase [Thermobaculum terrenum ATCC BAA-798] Length = 327 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 43/342 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG++GS + L+ +V+VID L Y G+ ++ ++ F QVD+ Sbjct: 1 MKVLVTGGAGYVGSVVVDELIARGD-EVVVIDNL-YQGHREAINPEAK-----FAQVDLL 53 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + P +AI++FA+ + V S+ + ++ NI+ LLE Sbjct: 54 DAHAVAEVF-DANPGIEAIMHFASHTLVGESMQRPELYLRNNIVMGVNLLEVAV------ 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +F+ ST ++G+ + E P +P SPY +K + ++ + Y + Sbjct: 107 ---PRGVRKFILSSTANLFGNPTRVPIDESQPLDPGSPYGESKLMLERILRWYERIYDLR 163 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 + + G +H PE +IPL ++ + F +YG DG +RD++ Sbjct: 164 YGALRYFNAAGATERRGEHHDPETHIIPLVLSVALGKRDSFTIYGGDYPTPDGTCIRDYV 223 Query: 225 YVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +V D +A L L + G R YN+G N+ +V + IP Sbjct: 224 HVYDLAQAHLLTLDALKEGSRTYNLGNGQGFSNLQVVEAARKVTGHPIPTQIG------- 276 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG S KI+SE+GW P+ ++ES + W+ Sbjct: 277 -PRRPGDPAVLVASSEKIRSELGWQPKYADLESIIRSAWEWH 317 >gi|218249175|ref|YP_002374955.1| WbnF [Borrelia burgdorferi ZS7] gi|218164363|gb|ACK74424.1| WbnF [Borrelia burgdorferi ZS7] Length = 355 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 160/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKAINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV+D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVDDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|283852851|ref|ZP_06370113.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] gi|283571761|gb|EFC19759.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] Length = 337 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 50/330 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + D + Y G+ ++K ++ DI R Sbjct: 5 ILVTGGAGYIGSHTCKAL-KAAGFTPVTYDNMVY-GHDWAVK------WGPLVRGDILSR 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E++P A+++FAA ++V S+ +++ N+ G+ LL R K Sbjct: 57 GSLDEVFAEYKPAAVLHFAAFAYVGESVTDPEKYYRNNVAGSLSLLSAMR---------K 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YG+ ++ +ED P P SPY TK + ++ + YGI Sbjct: 108 SGCKHIVFSSTCATYGAPERVPLTEDHPTRPMSPYGTTKLMIEQMLKDFEAAYGIGYTAL 167 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL I + V ++G DG VRD+++V Sbjct: 168 RYFNAAGADPEGLIGEDHDPETHLIPLVIAAGLGRRPQVEIFGTDYPTPDGTAVRDYIHV 227 Query: 227 EDHVRALYLVLKK---GRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 D A L ++K G YN+G GN+ R+ I V ++ ++ E Sbjct: 228 TDLAEAHILAVQKLLDGGPSATYNLGTGTGNSVREVIRAVEKVSGQPVPVV-------EG 280 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R D PG YA DS I E+GW P+ Sbjct: 281 PRRAGDSPG---LYA-DSGAIIRELGWKPR 306 >gi|254496037|ref|ZP_05108939.1| nucleoside-diphosphate-sugar epimerase [Legionella drancourtii LLAP12] gi|254354748|gb|EET13381.1| nucleoside-diphosphate-sugar epimerase [Legionella drancourtii LLAP12] Length = 347 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 156/349 (44%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG + + L +V+ ID L Y +L L++++ + F F++ Sbjct: 1 MKVLVTGAAGFIGFHVAQKLCARGD-EVVGIDNLNDYYEVSLKQARLQKLAHFSNFKFIR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +++ DRECI E +++ A++ V S+ ++ +N++G +LE R Sbjct: 60 LELADRECIAQLFTEHGFQRVIHLGAQAGVRYSLENPHAYVDSNLVGFVNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + S+ VYG+ FS D +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHRIEHLSY--ASSSSVYGANKTMPFSVHDNVDHPLSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ I +++ G + ++ G + RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMAIFNFTHKILSGEPIDVFNFGNHRRDFTYIDDIVEGILR 230 Query: 236 VLKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V GE YNIG ++ + ++ I L + L K+ Sbjct: 231 VHDHVAAPNLEWSGESPDPGTSAAPWRVYNIGNSSP---VQLLHYIEVLEECLGKKAQ-- 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + +PG D +K ++G+ P +E G+ V WY D Sbjct: 286 ---MNLLPMQPGDVPDTYADVEALKQDVGYKPGTPIEVGVRHFVDWYRD 331 >gi|238019552|ref|ZP_04599978.1| hypothetical protein VEIDISOL_01421 [Veillonella dispar ATCC 17748] gi|237864251|gb|EEP65541.1| hypothetical protein VEIDISOL_01421 [Veillonella dispar ATCC 17748] Length = 329 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 58/333 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E +F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVTFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +K+ +++FAA S V S++ + N++G++ L+E R Sbjct: 54 DPKLV-DIMKDHHIIGVMHFAAHSQVGESMVNPAIYYENNVVGSYHLIESARTAGVK--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKAS-----SDYLVLAWGHTY 175 F+ ST VYG + ED P +P++ Y TK SDY + +G TY Sbjct: 110 ------HFVFSSTAAVYGEPEVVPIREDAPLHPTNVYGRTKLMIEEMLSDYSAI-YGSTY 162 Query: 176 GIPVLL-------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNV 220 V L ++ S G H PE LIPL + + H+ ++G DG V Sbjct: 163 ---VALRYFNAAGADPSGTIGEDHHPETHLIPLVLDAARGKREHITVFGTDYNTADGTCV 219 Query: 221 RDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++V D A L L+KG + +N+G N GF + +I + Sbjct: 220 RDYIHVNDLAAAHVLAMDYLRKGGESQVFNLGSGN-----------GFSVKEIIETAKEV 268 Query: 278 TEL---IRFIEDRPGHDRRYAIDSSKIKSEIGW 307 T + +++ + R G S KIK+ +GW Sbjct: 269 TGIDIPVQYGDRRAGDPGTLIASSEKIKNLLGW 301 >gi|294494770|ref|YP_003541263.1| GDP-mannose 4,6-dehydratase [Methanohalophilus mahii DSM 5219] gi|292665769|gb|ADE35618.1| GDP-mannose 4,6-dehydratase [Methanohalophilus mahii DSM 5219] Length = 345 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 +VTG G G+ L +L++ I V I + + + N + K+ + N+ F+ D Sbjct: 6 LVTGITGQDGAYLAEFLLDKGYI-VHGIKRRSSSFNTARIDHLYKDPHERNVNFFMHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + ++ IG+ LLE R+ L Sbjct: 65 LTDSTNLIRIIQETQPDEIYNLAAQSHVQVSFETPEYTANSDAIGSLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + SE P+ P SPY+A K + ++ + + YG+ Sbjct: 121 GMEKK--VKFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKLYAYWITINYREAYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I +A+ + +G LY G+ RDW + D+V+A++ Sbjct: 179 ACNGILFNHESPIRGETFVTRKITMAVANIKKGLQERLYLGNLDAKRDWGFAGDYVKAMW 238 Query: 235 LVLKK 239 L+L++ Sbjct: 239 LMLQQ 243 >gi|196012566|ref|XP_002116145.1| hypothetical protein TRIADDRAFT_50808 [Trichoplax adhaerens] gi|190581100|gb|EDV21178.1| hypothetical protein TRIADDRAFT_50808 [Trichoplax adhaerens] Length = 359 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 39/345 (11%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTY-AGNLNSLKEISQSNLFSFLQV---D 58 ++TG G GS L L+N ++ ++ ++ G ++ L E +++ +++ D Sbjct: 14 LITGITGQDGSYLAELLINKGYEVHGIIRRSSSFNTGRISHLYEDPKTHTAKAMKLHYGD 73 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D C+ + QPD I N AA+SHV S ++ + +GT L++ R +C Sbjct: 74 LTDSTCLVKIISSVQPDEIYNLAAQSHVKVSFDLSEYTADVDAVGTLRLIDAIR---TC- 129 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + ++ RF Q ST E+YG + + E P+ P SPY K + ++V+ + Y + Sbjct: 130 --NLSNKIRFYQASTSELYGKVQEIPQKETTPFYPRSPYGVAKMYAFWIVINYREAYDMF 187 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRAL 233 N+ P E + ITR + H+ L G+ + RDW + +D+V A+ Sbjct: 188 CCNGILFNHESPRR-GETFVTRKITRAVAKIHLGLQEEVHLGNIDSCRDWGHAKDYVEAM 246 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVFEI--------GFLLDALIPKSYSHT 278 +++L+ + GE +++ RK ++ F + G LD + + T Sbjct: 247 WMMLQHDKPEDFVVATGEVHSV-----RKFVEAAFAVVGIKIGWKGSGLDEVGFDEANDT 301 Query: 279 ELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +R RP DS+K + ++GW P+ E + + V Sbjct: 302 VRVRINPKFYRPAEVDFLQGDSTKAREKLGWKPKVTFEELVTEMV 346 >gi|229541582|ref|ZP_04430642.1| UDP-glucose 4-epimerase [Bacillus coagulans 36D1] gi|229326002|gb|EEN91677.1| UDP-glucose 4-epimerase [Bacillus coagulans 36D1] Length = 331 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 150/337 (44%), Gaps = 55/337 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ D K V+VID NL + + F + DI Sbjct: 1 MSILVLGGAGYIGSHAVYQLI-DQKYDVVVID------NLQTGHRAAIHPKAKFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR ++ + + DAI++FAA S V S+ ++ N+ GT I+LE + Sbjct: 54 DRAFMQEVFGKEKIDAIIHFAANSLVGESMEQPLKYFDNNVYGTQIVLEMMK-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG + +E MP P++ Y TK + + ++ YGI Sbjct: 106 ----EFHVPHIVFSSTAATYGEPEHVPITETMPTVPTNTYGETKLTMEKMMKWCEKAYGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVR 221 V + + G H PE LIP+ + T + + + ++G DG VR Sbjct: 162 KYVALRYFNVAGARSTGEIGEDHHPETHLIPVVLETVLGKREAITIFGEDYDTKDGTCVR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSY 275 D+++VED + A L L+ G + +N+G +N ++ +D V E+ K + Sbjct: 222 DYIHVEDLIDAHILALQYLQNGGASDVFNLGSSNGFSVKEIVDTVREV-------TGKGF 274 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + ++ + R G S K K +GW P++ Sbjct: 275 N----VKIGDRRAGDPSTLIASSDKAKRVLGWNPKKT 307 >gi|269839847|ref|YP_003324540.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] gi|269791577|gb|ACZ43717.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] Length = 318 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 28/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR++VTG AGF+GS L R L+ + V+ +D T Y ++ + + ++ F F + Sbjct: 1 MRVLVTGCAGFVGSHLARRLLAEGH-HVVGVDNFTNYYPRHIKASNIADMLADPRFEFHE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEETRLW 114 +D+ + L + + + + AA++ V R+ GA + ++ N++ T LLE Sbjct: 60 LDLVTANLL-PLLADV--EIVYHQAAQAGV-RASWGAQFESYLRNNVLATQRLLE----L 111 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L K F+ S+ VYG + EDM P SPY TK +++ L + Sbjct: 112 LKALPIRK-----FVYASSSSVYGDAESYPTHEDMVPRPVSPYGVTKLAAEQLTYLYWKN 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P + YGP P+ I + G + +YGDG RD+ ++ D V A Sbjct: 167 YGVPTIALRYFTVYGPGQRPDMAFHKFIASALHGRPIQVYGDGHQTRDFTFISDVVEANI 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G N+GG + R + V A++ + L+ + + G R Sbjct: 227 AAGLCEAAGIAVNVGGGS-RVTVRQVL-------AILQEILGRELLVEYTAPQHGDVRHT 278 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A D + +G+ P+ ++ GL V W Sbjct: 279 AADIALANRVLGYEPRVSLREGLEAEVRW 307 >gi|330995336|ref|ZP_08319246.1| NAD dependent epimerase/dehydratase family protein [Paraprevotella xylaniphila YIT 11841] gi|329575831|gb|EGG57355.1| NAD dependent epimerase/dehydratase family protein [Paraprevotella xylaniphila YIT 11841] Length = 325 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 30/334 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +V GGAGF+GS LCR L+ +V+ +D L G + ++ ++ S F F + DI Sbjct: 10 LRALVAGGAGFVGSHLCRRLLQSGYGEVICVDNLQ-TGRIANVADLLCSPHFRFFEHDIV 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + AL E I + A + + T+++G+ LLE L++ Sbjct: 69 NGLPVSGALHE-----IYHLACPASPVQYQKSPIHTFKTSVLGSIHLLE--------LAK 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +K R L ST EVYG +E P+ S Y K ++ L + Y Sbjct: 116 EKGA--RILFTSTSEVYGDAQVSPQNESYWGNVNPFGIRSCYDEGKRGAETLFHDYHEEY 173 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP E +++ I + + G + ++GDG R + YV D + A+ Sbjct: 174 GVDTRIIRIFNTYGPQMSAEDGRVVSNFIVQALRGEPLTIHGDGTQTRSFQYVTDLIEAI 233 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G E D+ + + + P Y +D P R Sbjct: 234 VRTMRDGVPHGPINVGNPYEISVNDLAERVLRMTGSRSPVVYK-----PLPQDDPCRRRP 288 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + GW P ++ GL++T+ ++ N Sbjct: 289 DITLAASVLD--GWKPVVGLDEGLSQTIAYFRQN 320 >gi|294497805|ref|YP_003561505.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] gi|294347742|gb|ADE68071.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] Length = 326 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 155/345 (44%), Gaps = 51/345 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L + LV +V+V+D L+ G+ ++ E + F++ ++ + Sbjct: 2 ILVIGGAGYIGSHLVKELVK--TNEVVVLDNLS-TGHRWAIDEKA-----VFVEGNLGNE 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S + DA+++FAA S V S+ ++ N+ T LL+ + K Sbjct: 54 KDLESVFTNHKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQ---------TMMK 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ ST YG + +ED NP +PY +K + ++ + Y + ++ Sbjct: 105 HNVKKFIFSSTAATYGIPSVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVL 164 Query: 183 NCSNNYGPY--------HFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y H PE LIP+ + ++ E ++ ++G DG +RD+++V Sbjct: 165 RYFNAAGAYETAEIGECHDPETHLIPIILQHLLGERENISVFGSDYDTEDGTCIRDYIHV 224 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTE 279 D H+ AL +L + YN+G +G+ + +I K Sbjct: 225 TDLANAHISALQALLDGTKKTATYNLGNG-----------LGYSVKEVIETCEKVTGKKA 273 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + R G R S KI +E+GW Q ++E + W+ Sbjct: 274 NVVMADRRAGDPARLVASSDKIHAELGWKAQISLEKIIASAWNWH 318 >gi|148545786|ref|YP_001265888.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1] gi|148509844|gb|ABQ76704.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1] Length = 310 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 29/323 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS LC L+ D V ++D + G ++L ++ L ++ D+ D Sbjct: 6 ILITGGAGFIGSHLCDALL-DKGYAVRILDDFS-TGRRSNL-QVDHPRL-ELIEGDVADA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + A+V+ AA + V S+ +N IGT + E R+ Sbjct: 62 GLVTQAAAGCR--AVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHGV------ 113 Query: 123 KDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+ VYG+ +G SED P P +PY+ K +S+ + + +G+ ++ Sbjct: 114 ---RRVLFASSAAVYGNNGEGESISEDTPKAPLTPYAVDKLASEQYLDFYRRQHGLEPVV 170 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +I + R+++G + ++GDG+ RD+LYV D V+ + L Sbjct: 171 FRFFNIFGPRQDPSSPYSGVISIFCERVVQGLPITVFGDGEQTRDFLYVGDLVQVMVQAL 230 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ ++ E NIG N + LL AL K I + R G R Sbjct: 231 EQPQVEEGAVNIGLNQATS-------LNQLLAAL-EKVVGSLPAISYAAARSGDIRHSRA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 D+ ++ + + M GL K Sbjct: 283 DNQRLLARFKFAQVTPMVEGLTK 305 >gi|313622441|gb|EFR92891.1| UDP-glucose 4-epimerase [Listeria innocua FSL J1-023] Length = 328 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 150/335 (44%), Gaps = 57/335 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+N +V+V+D L G+ S+ + ++ F + DI Sbjct: 2 MSVVVLGGAGYIGSHAVDELINR-GYEVVVVDSLG-TGHQESIHKKAK-----FYEGDIR 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + ++ D++++FAA S V S+ E++ N+ GT +LLE Sbjct: 55 DKAFLNTVFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVM--------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP +P S Y TK + ++ YG+ Sbjct: 106 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGM 162 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 163 KFVALRYFNVAGAKADGSIGEDHKPETHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 222 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H+RAL LKKG +N+G +N GF + ++ + S Sbjct: 223 DYVQVEDLIDAHIRALEY-LKKGGESNIFNLGSSN-----------GFSVKEMLEAARSV 270 Query: 278 TEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 T + R G S K + +GW P Sbjct: 271 TGKAIPAEVVPRRAGDPGTLIASSDKAREILGWQP 305 >gi|170719740|ref|YP_001747428.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] gi|169757743|gb|ACA71059.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] Length = 310 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 29/321 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS LC L+ V V+D L+ G ++L ++ L ++ D+ D Sbjct: 6 ILITGGAGFIGSHLCDALLAK-GYAVRVLDDLS-TGKRDNL-QLGNPRL-ELVEGDVADA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ A A+V+ AA + V S+ + +N IGT + E RL Sbjct: 62 ALVQRAAAGC--SAVVHLAAVASVQASVEDPVKTHQSNFIGTLNVCEAMRLQGV------ 113 Query: 123 KDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+ VYG+ +G +ED P P +PY+ K +S+ + + +G+ ++ Sbjct: 114 ---RRVVFASSAAVYGNNGEGQSIAEDTPKAPLTPYAVDKLASEQYLDFYRRQHGLEPVV 170 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +I + R +G + ++GDG+ RD+LYV D V+ + L Sbjct: 171 FRFFNIFGPRQDPSSPYSGVISIFSERATQGLPITVFGDGEQTRDFLYVGDLVQVMVQAL 230 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ ++ E NIG N ++ + ++ +L P SY E R G R Sbjct: 231 EQPQVEEGAVNIGLNQATSLNQLLKALETVVGSLPPVSYG--------EARSGDIRHSRA 282 Query: 297 DSSKIKSEIGWFPQENMESGL 317 D+ ++ + + +M GL Sbjct: 283 DNQRLLARFDFPQPTSMVEGL 303 >gi|87123083|ref|ZP_01078934.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9917] gi|86168803|gb|EAQ70059.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9917] Length = 350 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 47/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----------TYAGNLNSLKEISQSNLF 52 ++VTG AGFIG+ALC+ L+ + +V+ ID L + ++ + + Sbjct: 9 VLVTGAAGFIGAALCQRLL-ERGDRVIGIDNLNSYYDPALKRARLAEVEAVTAAPGAGRW 67 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F + + D + + + +P +VN AA++ V S+ +I +N++G LLE Sbjct: 68 RFEPIALEDADALMALFAAERPAVVVNLAAQAGVRYSLDNPAAYIQSNLVGFGTLLE--- 124 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAW 171 C ++ + S+ VYG F E P N P S Y+A+K +++ + + Sbjct: 125 ---GCRHHGVEN---LVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTY 178 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 H YG+P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V Sbjct: 179 SHLYGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGEPIKVFNHGRMQRDFTYIDDIVE 238 Query: 232 ALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPK 273 + K +NI GN+E + E+ + + Sbjct: 239 GVLRCCDKPATANPSFDPLAPDPATAAAPHRLFNI-GNSEPIELLRFIEV-------MEQ 290 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ + F +PG A D++ +++ +G+ P + G+ + WY Sbjct: 291 AFGREAIKDFQPMQPGDVVATAADTTALEAWVGFRPSTPIAEGVQRFADWY 341 >gi|169797738|ref|YP_001715531.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Acinetobacter baumannii AYE] gi|215485088|ref|YP_002327329.1| Vi polysaccharide biosynthesis protein vipB/tviC [Acinetobacter baumannii AB307-0294] gi|301510102|ref|ZP_07235339.1| Vi polysaccharide biosynthesis protein vipB/tviC [Acinetobacter baumannii AB058] gi|169150665|emb|CAM88574.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Acinetobacter baumannii AYE] gi|213988268|gb|ACJ58567.1| Vi polysaccharide biosynthesis protein vipB/tviC [Acinetobacter baumannii AB307-0294] Length = 340 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 30/334 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL---FSFLQVD 58 ++TG AGFIGS L L+ L V+ +D + NL+ ++ + S+ F+F D Sbjct: 19 LITGVAGFIGSNLLETLLK-LNQNVIGLDNFATGHQYNLDEVETLVSSDQWKNFTFYNGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWS 116 I + E + A D +++ AA V RSI AD +T NI G +L R Sbjct: 78 IRNLEDCQKACANV--DYVLHQAALGSVPRSI--ADPILTNSANITGFLNMLVAARD--- 130 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +Q K F ++ YG E+ NP SPY+ TK ++ + TYG Sbjct: 131 --AQVKS----FTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYAEVFARTYG 184 Query: 177 IPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + N +G P +IP MI+G VF+ GDG+ RD+ Y+E+ V+A Sbjct: 185 FKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGDDVFINGDGETSRDFCYIENTVQA 244 Query: 233 --LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L V + YN+ +R ++ +F+ + AL S+ + + E R G Sbjct: 245 NILAAVANDEAKNQVYNVAV-GDRTTLNDLFKA--IKSALKENGISYDKEPVYREFRAGD 301 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +KIK+ +G+ P+ + G+++ + WY Sbjct: 302 VRHSQADVTKIKTLLGYDPKFRIFEGISQAMVWY 335 >gi|294140249|ref|YP_003556227.1| GDP-mannose 4,6-dehydratase [Shewanella violacea DSS12] gi|293326718|dbj|BAJ01449.1| GDP-mannose 4,6-dehydratase [Shewanella violacea DSS12] Length = 372 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 38/344 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQ 56 + ++TG G GS L L+ + +V I + + N + I Q N F Sbjct: 3 KALITGITGQDGSYLAELLL-EKGYEVHGIKRRASSLNTERVDHIYQDNHEINQKFFLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + LK+ QPD + N A+SHV S + + +GT LLE R Sbjct: 62 GDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAMGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK +F Q ST E+YG + + E P++P SPY+ K + ++V+ + +YG Sbjct: 119 -LGLEKKT--KFYQASTSELYGEVQETPQRETTPFHPRSPYAVAKMYAYWIVVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AIT + +G LY G+ +RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAITNISQGLEQCLYLGNMDALRDWGHAKDYVRM 235 Query: 233 LYLVLKK-----------GRIGERYNIGGNNERKNIDIVF------EIGFLLDALIPKS- 274 +++L++ +I R + + + I++ F EI +++ K+ Sbjct: 236 QWMMLQQDVADDFVIATGKQISVREFVRMSAQNVGIELEFTGAGMNEIATVVEITGDKAR 295 Query: 275 -YSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENME 314 S ++I ++ RP D SK K ++GW P+ +E Sbjct: 296 GVSVGDVIVKVDTRYFRPAEVETLLGDPSKAKEKLGWVPKITVE 339 >gi|33864169|ref|NP_895729.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9313] gi|33635753|emb|CAE22078.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9313] Length = 340 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 44/348 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNL---FSFL 55 ++VTG AGFIG+AL + L+ +V+ ID L Y +L L ++ ++L ++F Sbjct: 5 VVVTGAAGFIGAALVQRLLAQGD-RVIGIDNLNDYYDPSLKRARLAQVEAASLKASWTFY 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + D I K +P+ +VN AA++ V S+ +I N++G +LE R Sbjct: 64 PIALEDGAAIEELFKAEKPEVVVNLAAQAGVRYSLENPAAYIQANLVGFGHILEGCR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG F E P N P S Y+ATK +++ + + H Sbjct: 121 ------HHGVQHLVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAATKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V L Sbjct: 175 YGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGEPIKVFNYGKMQRDFTYIDDIVEGLL 234 Query: 235 LVLKK-----------------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 K + R +NIG + + I+++ I FL ++L Sbjct: 235 RCCDKPATANLGFDPRNPDPATAAVPHRLFNIGNS---QPIELMHFIEFLENSL-----G 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + F +PG A D+S +++ + + P + G+ WY Sbjct: 287 REAVKDFQPMQPGDVMATAADTSALEAWVDFRPSTPIAEGVECFSQWY 334 >gi|220930598|ref|YP_002507507.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] gi|220000926|gb|ACL77527.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] Length = 328 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 158/355 (44%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L+ D K +V+V+D L L F+Q D+ Sbjct: 1 MAVLVTGGAGYIGSHTVAELL-DAKEEVIVLDNLEKGHREAVLGG-------KFIQADLR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + IR LKE +A+++FAA V S++ ++ N+I + LL + + + Sbjct: 53 NIDEIRKVLKENDIEAVIHFAAYIEVGESVINPLKYYNNNVIASLNLL-------TAMQE 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL----AWGHTYG 176 ++ F ST YG ++ E P +PY TK + + ++ A+G Y Sbjct: 106 AGVNKIVFS--STAATYGIPEQIPIKESDRTAPINPYGETKLTVEKMLKWADDAYGIKYA 163 Query: 177 IPVLLSNC----SNNYGPYHFPEK-LIPLAITRMIEGS--HVFLYG------DGQNVRDW 223 + + C S G H PE LIP+ I ++ +G + ++G DG VRD+ Sbjct: 164 VLRYFNACGAHISGKIGEAHSPESHLIPI-ILQVAQGKRDEIKIFGSDYNTKDGTCVRDY 222 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D +A L LK KG +N+G N ++V + A+ K+ T+ Sbjct: 223 IHVSDLSQAHVLALKNLRKGAESNTFNLGNGTGFSNKEVV----EVARAVTGKTIKATDA 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 R RPG + K + +GW P+ N LNK V + W W + Sbjct: 279 PR----RPGDPDILIASAEKAINILGWKPKYN---DLNKIV----ETAWKWHSTH 322 >gi|330465684|ref|YP_004403427.1| UDP-glucose 4-epimerase [Verrucosispora maris AB-18-032] gi|328808655|gb|AEB42827.1| UDP-glucose 4-epimerase [Verrucosispora maris AB-18-032] Length = 327 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 93/363 (25%), Positives = 157/363 (43%), Gaps = 59/363 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAGFIGS + R L+ D QV+V+D L G+ +L + +F++ I Sbjct: 1 MKLLVTGGAGFIGSVVTRMLL-DAGHQVVVLDDL-RTGHREALAPDA-----TFVEAGIH 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + F D +++FAA S++ + + N +G+ LL+ R Sbjct: 54 DAARVLTPEAGF--DGVLHFAALIAAGESMVAPERYWHNNTVGSLALLDAVR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG+ + E P++ Y ATK + D + + +G+ + Sbjct: 104 -AAGVPRLVFSSTAAVYGNPVELPIVETAIKAPTNTYGATKLAVDMALTSEAIGHGLAAV 162 Query: 181 LSNCSNNYGPY----------HFPEK-LIPLAITRMIE-GSHVFLYG------DGQNVRD 222 N G Y H PE LIP+A+ + + L+G DG VRD Sbjct: 163 SLRYFNVAGAYLDGDTALGERHDPETHLIPIALEVAADRRDKLQLFGDDYPTIDGTCVRD 222 Query: 223 WLYVEDHVRALYLVLKKGRIGER--YNIGGNN---ERKNIDIVFEIGFLLDALIPKSYSH 277 +++V D RA L L G+ YN+G N R+ +++V EI H Sbjct: 223 YIHVADLARAHLLALDAAVPGQHRIYNLGNGNGFTNRQVVEVVREI-----------TGH 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 + R G ++ ++E+GW PQ+ T+ + + W++ ++ Sbjct: 272 PLPVEMAPRREGDPAELVASAALARAELGWEPQK-------PTLHDMISDAWFFYRTHRL 324 Query: 338 LKP 340 +P Sbjct: 325 AQP 327 >gi|309790433|ref|ZP_07684995.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] gi|308227546|gb|EFO81212.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] Length = 320 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 39/330 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG GF+G L YL+ +V +D+ + NLN Q ++ S D+ Sbjct: 1 MRALITGINGFVGGHLAEYLLQVGGWEVWGLDR---SSNLNLTSLHGQVHVVS---ADLA 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E L+ +P+ I + A ++ V S + TN +G ++ + +++ Sbjct: 55 DAEATAQVLRTVRPEVIFHLAGQAAVPESFRDPAATLATNTLGAL------HIFLTLIAE 108 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K R + + T E YG + + E+ P P+SPY +K + L L + ++ + Sbjct: 109 --KLPCRVIVVGTSEEYGQIRPEDLPLREEAPLRPTSPYGVSKVAQSLLALQYHLSHHLD 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIE------GSHVFLYGDGQNVRDWLYVEDHVRA 232 ++ + GP ++ + A R I V G+ RD+ V D VR Sbjct: 167 LIRVRPFTHIGPRQ-SDRFVTAAFARQIARIELGLQEPVMRVGNLTAARDFTDVRDIVRG 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L+ G+ GE YN+G DI L+AL+ +S++ +E P R Sbjct: 226 YVLLAHHGQAGEVYNLGSGRAIMIRDI-------LEALLAQSHAQIA----VEPDPSLMR 274 Query: 293 RYAI-----DSSKIKSEIGWFPQENMESGL 317 I D++K+ + GW P +E+ L Sbjct: 275 PIDIPLISCDATKLHAATGWQPHYAIEATL 304 >gi|205356133|ref|ZP_03222900.1| putative GDP-mannose 4,6 dehydratase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345976|gb|EDZ32612.1| putative GDP-mannose 4,6 dehydratase [Campylobacter jejuni subsp. jejuni CG8421] Length = 358 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ ++D Sbjct: 80 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILK---AKD 136 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 137 GYDPVVHI-CSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTF 195 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 196 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYY 254 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG++ GE +NI G F++ ++D L+ S + +R +ED Sbjct: 255 LLSLESEKGKVPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 307 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+ KIKS I W Sbjct: 308 RPIDADYQMFDNGKIKSFIDW 328 >gi|254168016|ref|ZP_04874864.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469] gi|289595956|ref|YP_003482652.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] gi|197623059|gb|EDY35626.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469] gi|289533743|gb|ADD08090.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] Length = 285 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 142/321 (44%), Gaps = 48/321 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TG +G +GS L + N + + + + + F+ + DI R Sbjct: 2 ILITGSSGQLGSYLIESIPNSVGLDI-------------------RPSKFTEIVGDI--R 40 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + LK ++ DAI++ AA+ V +S+ NI+GT LLE R K Sbjct: 41 GNLDILLKNYEIDAIIHAAAQVSVVKSVEDPKNDADNNIMGTINLLEYAR---------K 91 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D +F+ IS+ VYG E P P SPY +K + + L + YG+ V Sbjct: 92 YDVEQFIYISSAAVYGEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYSELYGLKVASI 151 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N + P P +I + ++R +G + +YGDG+ RD++ V+D V + L L Sbjct: 152 RPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQDVVHLVKLALA 211 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--GHDRRYAI 296 K G YN G E + E+ ++ L K I+ + D+P G R+ Sbjct: 212 KKADG-VYNCGTGKETS----INELAKIIAELSGKG------IKIVHDKPREGDIRKSYA 260 Query: 297 DSSKIKSEIGWFPQENMESGL 317 D SK EIG+ P+ N++ L Sbjct: 261 DISK-AIEIGYEPKTNLKEDL 280 >gi|220923116|ref|YP_002498418.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219947723|gb|ACL58115.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 318 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ +VL +D + G +++ + ++ F L+ D+ Sbjct: 9 RILVTGGAGFLGSHLCEQLLGQGH-EVLCVDNF-FTGTRRNVEHLLKNPSFELLRHDV-- 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ GT + L Sbjct: 65 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGTI----------NVLGLA 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + LQ ST EVYG + +E+ P P S Y K ++ L + + Sbjct: 110 KRVKAKVLQASTSEVYGDPEMHPQAEEYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQHA 169 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P+ +++ + + + + +YGDG+ R + YV+D V+ L Sbjct: 170 LQIKVARIFNTYGPRMHPDDGRVVSNFVVQALSNRDITVYGDGRQTRSFCYVDDLVQGLI 229 Query: 235 LVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 +++ R+ N+G E F I L + ++ + S +E++ +D P Sbjct: 230 AMMETDSRVTGPINLGNPGE-------FTIRELAELVVELTGSRSEIVYKPLPQDDP--- 279 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + +GW P ++ GL +T+ ++ Sbjct: 280 RQRKPDIDRATRILGWRPAIDLREGLVRTIEYF 312 >gi|289578903|ref|YP_003477530.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] gi|289528616|gb|ADD02968.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] Length = 329 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 50/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M ++V GGAG+IGS L+N K +V+V+D L +K +S L L + D+ Sbjct: 1 MAILVCGGAGYIGSHTVAALLNR-KEEVVVVDNL--------VKGHKKSVLGGKLYIGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + KE + +A+++FAA S V S+ ++ N+ GT LL+ + Sbjct: 52 RDEAFLDKVFKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMK------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIP 178 K + + + ST VYG ++ E+ NP+SPY TK + + + L W YGI Sbjct: 105 --KHNVKKIVFSSTAAVYGEPERIPIKEEDKTNPTSPYGETKLAVEKM-LKWADVAYGIK 161 Query: 179 --------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRD 222 V + + G H PE L+P+ + + + + +YG DG +RD Sbjct: 162 YVALRYFNVAGAIETGEIGEDHSPETHLVPIILQVALGKRDKIRIYGDDYPTKDGTCIRD 221 Query: 223 WLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHT 278 +++V D A L L K R YN+ GN E ++ V E+ + IP +H Sbjct: 222 YIHVMDLADAHILALDKLRKDNESAIYNL-GNGEGFSVKEVIEVARKVTGHPIPAEVTHR 280 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG S KI E+GW P+ Sbjct: 281 --------RPGDPAVLVASSEKITKELGWTPK 304 >gi|222149889|ref|YP_002550846.1| UDP-glucuronic acid epimerase [Agrobacterium vitis S4] gi|221736871|gb|ACM37834.1| UDP-glucuronic acid epimerase [Agrobacterium vitis S4] Length = 339 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 38/349 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD-- 58 MR +TG AGFIG L R L+ D V D +T NL LKE + L F Sbjct: 1 MRYFITGTAGFIGFHLARRLLQDGHT-VTGYDGMTAYYNLK-LKEARNAALAQFPNFSGV 58 Query: 59 ---ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR+ + A+ + +PD I++ AA++ V S+ ++ +N+IG+ W Sbjct: 59 IGMLEDRDALERAVDQAKPDVIIHLAAQAGVRYSLENPKAYLDSNLIGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + + ++ Q L + ST +YG+ + F E D P + Y+A+K + + ++ H Sbjct: 109 NIVEIARQLQIGHLMLASTSSIYGANPQVPFRETDRADEPMTFYAASKKGMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE---DHV 230 Y +P YGP+ P+ + + M+ + +YG+G+ RD+ Y++ D V Sbjct: 169 LYKVPTTAFRFFTVYGPWGRPDMALFKFMKAMLADEAIEIYGEGKMSRDFTYIDDLIDSV 228 Query: 231 RALYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 AL + ++ R+ N+ + ++ G AL+ E I I RP Sbjct: 229 IALSAIAPSEENRVRTPENLDTLSHNAPFRVINIGGGQPIALM----DFIETIETIMGRP 284 Query: 289 GHDRRYAIDSSKIKSEI----------GWFPQENMESGLNKTVCWYLDN 327 + + + G P ++ G+ T+ WYL++ Sbjct: 285 TKRKMLPMQQGDVPRTFASPDLLVALTGQKPTTTLDVGVKATMDWYLEH 333 >gi|320160039|ref|YP_004173263.1| GDP-L-fucose synthase [Anaerolinea thermophila UNI-1] gi|319993892|dbj|BAJ62663.1| GDP-L-fucose synthase [Anaerolinea thermophila UNI-1] Length = 320 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 63/347 (18%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVDI 59 R+ VTGGAGF+G V KL G +SQ +F + + D+ Sbjct: 11 RVCVTGGAGFLGQ--------------FVQKKLRERG-------VSQEQIFVPHYPEYDL 49 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD-----EFITTNIIGTFILLEETRLW 114 E +R L + +PD I++ AA HV +GA+ EF N++ L+ E Sbjct: 50 VKPEDVRRVLDDSRPDVIIHLAA--HV--GGIGANREHPAEFFYDNLMMGVQLMHEA--- 102 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-----MPYNPSSPYSATKASSDYLVL 169 W KK +F+ I T Y F ED P ++PY K + Sbjct: 103 W------KKGVGKFVAIGTVCAYPKFTPVPFKEDDLWNGYPEETNAPYGLAKKMLLVMAQ 156 Query: 170 AWGHTYGIPVLLSNCSNNYGPYH----FPEKLIPLAITRMIEGSH-----VFLYGDGQNV 220 A+ YG + N YGP +IP I + IE V L+GDG Sbjct: 157 AYRQQYGFNAIFLLPVNLYGPGDNFDLQSSHVIPAMIRKFIEAEEAGKDEVVLWGDGSPT 216 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 R++LYVED + + + N+G E + D L LI + ++ Sbjct: 217 REFLYVEDAAEGIVRATEAYEGSDPVNLGSGYEIRIRD--------LAELIARLTGYSGK 268 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 I + +P R A+D+++ + G+ + N E GL KT+ WY N Sbjct: 269 IVWDTTKPNGQPRRALDTTRAEKYFGFRARTNFEEGLQKTIEWYRQN 315 >gi|190410051|ref|YP_001965575.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium meliloti] gi|125631081|gb|ABN47082.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium meliloti SM11] Length = 348 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 37/331 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ +V+ +D + G ++ + + + F + DI D Sbjct: 31 ILVTGGAGFLGSHLCELLLG-AGHEVICLDNFS-TGLRRNIAPLKRYDTFRVIAHDIVDP 88 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + D I N A + + T +IG+ LL+ Sbjct: 89 -------IDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLA----------A 131 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R Q ST E+YG E + P S Y K ++ L + +G+ Sbjct: 132 RRGARIFQASTSEIYGDPQVHPQVESYWGNVNSFGPRSCYDEGKRCAETLFFDYQKVHGV 191 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 + N YGP P+ +++ I + ++G ++ +YGDG R + +V+D + + Sbjct: 192 ETKIVRIFNTYGPRMRPDDGRVVSNFIVQALKGENITIYGDGSQTRSFCFVDDLIDGFVR 251 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 L+ + N+G E F IG L D +I + S ++++R P D R+ Sbjct: 252 LMGSPASLTGPVNLGNPTE-------FTIGELADEVIRLTNSRSKIVRL--PLPVDDPRQ 302 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S E+GW P+ N+ GL +T+ ++ Sbjct: 303 RRPDISLATKELGWRPKVNLAEGLAQTIRYF 333 >gi|103487051|ref|YP_616612.1| NAD-dependent epimerase/dehydratase [Sphingopyxis alaskensis RB2256] gi|98977128|gb|ABF53279.1| NAD-dependent epimerase/dehydratase [Sphingopyxis alaskensis RB2256] Length = 319 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 43/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ +VL +D L + G+ ++L ++ + LF F++ D+C Sbjct: 10 RVLVTGGAGFLGSHLVDRLLARGD-EVLCVDNL-FTGDKSNLDHLAGNPLFEFMRHDVCF 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAI N A + + T++ G + L Sbjct: 68 PLFV-------EVDAIFNLACPASPIHYQHDPVQTTKTSVHGAI----------NMLGLA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 K+ + Q ST EVYG D + + Y NP S Y K ++ L + Sbjct: 111 KRLKVPIFQASTSEVYG--DPTMHPQQESYWGNVNPIGIRSCYDEGKRCAETLFFDYHRQ 168 Query: 175 YGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + + ++ N YGP H + +++ I + + G + +YGDG R + YV+D + A Sbjct: 169 HQLDIKIARIFNTYGPRMHAADGRVVSNFIVQALHGEDITIYGDGSQTRSFCYVDDLISA 228 Query: 233 LYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPG 289 + G + NIG E F I L + ++ K ++L+R +D P Sbjct: 229 FVAFMDAGPNVHGPINIGNPAE-------FTILELAEKILSKVGGASKLVRQPLPQDDP- 280 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S+ K+++GW P ++ GL++T+ ++ Sbjct: 281 --LQRQPDISRAKAQLGWEPTVELDEGLDRTIAYF 313 >gi|260574735|ref|ZP_05842738.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2] gi|259023152|gb|EEW26445.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2] Length = 343 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 143/330 (43%), Gaps = 35/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ V+ +D L G +++ + + FSF++ DI D Sbjct: 27 ILVAGGAGFVGSHLCDALIGAGN-HVICVDNLE-TGRESNVAHLFANPRFSFIRWDIIDP 84 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L D I N A + T I G++ LLE R Sbjct: 85 LPIDGPL-----DQIYNMACAASPPLYQKLPIHTFRTCIEGSYNLLELAR---------- 129 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R LQ ST EVYG + SE P + Y K +++ L +G G+ Sbjct: 130 QKRARILQSSTSEVYGDPEVSPQSEKYRGAVNTMGPRACYDEGKRAAETLFWEYGAHQGV 189 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ N YGP P+ +++ + + + G + +YGDG R + YV+D V L + Sbjct: 190 ETRVARIFNTYGPRMNPQDGRVVSNFVVQALTGDDITIYGDGLQTRSFAYVDDLVDGL-M 248 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RRY 294 L + N+G E F + L D ++ ++ S + L+ P D R+ Sbjct: 249 RLMASDCTQAVNLGNPGE-------FTMRELADMVLAQTGSKSRLV--TRPLPVDDPRQR 299 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ +GW P +E GL +T+ + Sbjct: 300 KPDIRLAQTLLGWSPTVPLEEGLTRTIAHF 329 >gi|187251018|ref|YP_001875500.1| UDP-glucose 4-epimerase [Elusimicrobium minutum Pei191] gi|186971178|gb|ACC98163.1| UDP-glucose 4-epimerase [Elusimicrobium minutum Pei191] Length = 324 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 52/344 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++V GGAG+IGS R L ++K +V D L+ G+ +++ I F++ D+ D Sbjct: 4 ILVVGGAGYIGSNTVRVL--EIKGYSPIVYDNLS-KGHKKAVRGIP------FIKGDLGD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ +++ +F+ DA+++FAA + V S++ ++ N+ LL+ + + Sbjct: 55 KKKLKTVFSKFKIDAVMHFAAFTEVGESVITPAKYYENNVAKVLNLLD-------AMVES 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F F ST +G K L E P NP +PY TK + ++ + H+YG+ + Sbjct: 108 GINYFVFS--STAATFGEPVKELIDETHPQNPINPYGRTKLMVENILKDYDHSYGLKSVC 165 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 ++ G H PE LIPL + + + ++G DG VRD+++ Sbjct: 166 LRYFNACGASPDGKTGESHDPETHLIPLVFQAALGKRESIKVFGNDYPTPDGTAVRDYIH 225 Query: 226 VEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V D A L L+K + YN+G + G+ + +I T L Sbjct: 226 VNDLASAHILALEKMAKENKSAWYNLGSGS-----------GYSVKEIIETVKEVTGLDF 274 Query: 283 FIEDRP---GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +E+ P G DS+K K ++ W PQ N++ + W Sbjct: 275 KVENAPRRAGDPAVLVADSAKAKQDLKWEPQFNLKEIIKTVAKW 318 >gi|295703182|ref|YP_003596257.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] gi|294800841|gb|ADF37907.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] Length = 326 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 51/345 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS L + LV +V+V+D L+ G+ ++ E + F++ ++ + Sbjct: 2 ILVIGGAGYIGSHLVKELVK--TNEVVVLDNLS-TGHRWAIDEKA-----VFVEGNLGNE 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S + DA+++FAA S V S+ ++ N+ T LL+ + K Sbjct: 54 KDLESVFANHKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQ---------TMMK 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ ST YG + +ED NP +PY +K + ++ + Y + ++ Sbjct: 105 HNVKKFIFSSTAATYGIPSVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVL 164 Query: 183 NCSNNYGPY--------HFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y H PE L+P+ + ++ E ++ ++G DG +RD+++V Sbjct: 165 RYFNAAGAYETAEIGECHDPETHLVPIILQHLLGERENISVFGSDYDTADGTCIRDYIHV 224 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTE 279 D H+ AL +L + YN+G +G+ + +I K Sbjct: 225 TDLANAHISALQALLDGSKKTATYNLGNG-----------LGYSVKEVIETCEKVTGKKA 273 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + R G R S KI +E+GW Q ++E + W+ Sbjct: 274 NVVMADRRAGDPARLVASSDKIHAELGWKAQISLEKIIASAWNWH 318 >gi|257094831|ref|YP_003168472.1| NAD-dependent epimerase/dehydratase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047355|gb|ACV36543.1| NAD-dependent epimerase/dehydratase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 356 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 32/339 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQ 56 R +VTG AGFIGS L L+ L V+ +D N SL +Q + F++ Sbjct: 24 RWLVTGSAGFIGSHLVESLLR-LDQTVVGLDNFATGHRRNLDEVRSLVTPAQWSRHRFVE 82 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DICD + R A + D +++ AA V RS+ N+ G +L R Sbjct: 83 ADICDLDACREACRGI--DFVLHQAALGSVPRSLANPVATNAANVDGFLNMLVAAR---- 136 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+ ++ YG + E+ P SPY+ TK ++ + YG Sbjct: 137 -----DAGVRRFVYAASSSTYGDHEALPKIEERIGRPLSPYAVTKLVNELYAEVFARCYG 191 Query: 177 IPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + N +G PE +IP M+ G V + GDG+ RD+ +V++ V+A Sbjct: 192 LAPIGLRYFNVFGARQDPEGAYAAVIPRWTRAMLLGEEVKINGDGETSRDFCFVDNAVQA 251 Query: 233 LYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTELIRFIED 286 L + + YN+ ++R +++ +F++ L DAL P S + + Sbjct: 252 NLLAATTDDPAAVNQVYNVA-VDDRTSLNRLFDM--LRDALSDFRPDVRSLRPV--YGGF 306 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 RPG R D K + +G+ P +E G+ + WY+ Sbjct: 307 RPGDVRHSQADIDKARRLLGYLPSHRLEDGVRVAMPWYV 345 >gi|284041245|ref|YP_003391175.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74] gi|283820538|gb|ADB42376.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74] Length = 322 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/339 (24%), Positives = 155/339 (45%), Gaps = 23/339 (6%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M +++TGGAGFIG L R+L+ + VL++D A ++ I + +S Q Sbjct: 1 MTILITGGAGFIGHTLTRHLLA-MGHTVLLLDNFNSSYDPAIKWQHIQSIRHLSGWSLYQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + ++ D +++ A + V S+ ++ N+ GT +LLE R++ Sbjct: 60 GDIRDAVLLHQIFSAYRVDGVIHLAGLAGVRPSLQNPSAYMDHNVNGTAVLLEAMRVF-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ S+ VYGS G+F E D N SPY+ +K +++ L + Sbjct: 118 -------NIKRFVFASSSSVYGSRSGGVFLETDCAENSVSPYAFSKRAAERLCQQHHQLH 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+ V YGP P+ I I ++ + L+G+G + RD+ YV+D V + Sbjct: 171 GLHVFCLRLFTVYGPQQRPDMGISRFIQQLNNRQPITLFGNGLSRRDYTYVDDIVAGISQ 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +++ + E N+G + ++++ + L+ +P I ++ D+PG Sbjct: 231 SIERVKGCEIINLGSAHPVTLLELIGMLEQLIKRRVP--------INWLADQPGDVPYTH 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 K + + + P +++ GL V Y + +P+ Sbjct: 283 ASIEKARRLLDYQPATDLKDGLRNMVNQYQRTQAYAQPI 321 >gi|153806440|ref|ZP_01959108.1| hypothetical protein BACCAC_00704 [Bacteroides caccae ATCC 43185] gi|149131117|gb|EDM22323.1| hypothetical protein BACCAC_00704 [Bacteroides caccae ATCC 43185] Length = 355 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 159/340 (46%), Gaps = 38/340 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNLFSFLQVDI 59 R+ +TG GF GS +C+ L N +V A SL +I+ + ++ S + DI Sbjct: 12 RVFLTGHTGFKGSWMCKMLAN---AGAIVTGYSLNAPTEPSLFKIANIEGDIHSVIG-DI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +RE + +A E QP+ +++ AA+ V S TN+IGT +LE C+ Sbjct: 68 RNRESLMAAFNEAQPEIVLHLAAQPIVRDSYKDPAYTYETNVIGTVNILE-------CVR 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + FL ++TD+VY L+K + E+ + PYS +K+ S+ + ++ H++ Sbjct: 121 QSNCVK-SFLNVTTDKVY--LNKEWNWGYRENEELDGYDPYSNSKSCSELVTHSYKHSFF 177 Query: 177 --------IPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 IP+ + N G F +++IP ++ R E + + + R + +V Sbjct: 178 TDKEGQPIIPISTARAGNVIGGGDFANDRIIPDSV-RAAEKHEDIVVRNPFSTRPYQHVL 236 Query: 228 DHVRALYLVLKK----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 + + A L+ K + + YN+G ++ +D F+ G L+D + K + I Sbjct: 237 EPLYAYLLIAMKQYQDSKYADYYNVGPDD----VD-CFQTGALVDLFVSKWGEGLKWINK 291 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + P +D SK+KS GW P+ N++ + K V W Sbjct: 292 YDGGPHEANFLKLDCSKLKSTFGWAPRWNLDEAMEKIVEW 331 >gi|288560644|ref|YP_003424130.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium M1] gi|288543354|gb|ADC47238.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium M1] Length = 331 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 29/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG +GS L R L +V+++D ++ A N + + +Q DI D Sbjct: 12 ILVTGGAGCVGSNLTRKLAELGAEKVIILDNMSSAYEWN----VPTNENVELIQGDILDD 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ K +PD + + AA S+ + + N IG +L+ +L Sbjct: 68 EELKRVFK-MKPDYVFHLAAHFANQNSVDNPETDLMVNGIGILKVLQYAQL--------- 117 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VYG K F E D+ + +PY TK + + + Y +P++ Sbjct: 118 TGVERFVYSSSGCGVYGLDSKMPFEEHDISISLHTPYQVTKLLGELYTNYFHNLYDMPIV 177 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LV 236 + N +GP P K +IP + + + GDG RDW +V D V L + Sbjct: 178 NARFFNVFGPGEVPGKYRNVIPNFFYWSMTKQALPITGDGTETRDWTFVGDIVNGLLSMG 237 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 +++ IGE N+G + + ID+ ++ L + E I ++ R + + Sbjct: 238 VEEEAIGEAINLGSGKDHRVIDMANKVNQLT--------GNEEGIAYVARRNWDAKTKLL 289 Query: 297 DS-SKIKSEIGWFPQENMESGLNKTVCWYLDN 327 S K K +G+ P + + GL + W+ DN Sbjct: 290 SSIDKAKDILGYKPTVSFDDGLERVYGWFTDN 321 >gi|219852721|ref|YP_002467153.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] gi|219546980|gb|ACL17430.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] Length = 304 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 140/328 (42%), Gaps = 31/328 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L K QV+V+D L+ +N LK + F++ I Sbjct: 1 MKVVVTGGAGFIGSNLAEELSK--KHQVIVLDDLSTGREIN-LKGLD----VEFIKGSIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + D + + AA V RS+ NI GT +L R Q Sbjct: 54 DLSLVNRVFSGV--DYVFHEAALPSVQRSVENPVATNEVNIGGTLNVLMAAR------DQ 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG E M P SPY+ TK + ++ + YG+ + Sbjct: 106 GVK---KIMFASSSSVYGDTPTLPKRESMTPAPMSPYAVTKLTGEHYFNVFSSLYGLKMT 162 Query: 181 LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +GP P+ +IP IT+++ ++GDG+ RD+ ++ D V A L Sbjct: 163 CLRYFNVFGPRQDPKSQYAAVIPNFITKILNHESPIIHGDGEQTRDFTFIRDVVHANILA 222 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ G +NI D + L D ++ ELI + R G R Sbjct: 223 MESSSEG-IFNIA-------CDRRVSLNVLADQIMEIIGERRELI-YDAPRSGDVRDSLA 273 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K + + P + GL +T+ W+ Sbjct: 274 DYTLAKEHLNYEPGFTLLQGLEETIQWF 301 >gi|206967594|ref|ZP_03228550.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH1134] gi|206736514|gb|EDZ53661.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH1134] Length = 321 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 153/341 (44%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L L+ +V V+D Y G +E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELMRR-GYEVTVVDNF-YKGKNKYHEELMKK--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVD--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEQS----IKEVAEVIKKLT-NSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E+GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLKKLVQFQAKVTWENGLKETIKWFREQN 319 >gi|15964836|ref|NP_385189.1| UDP-glucuronic acid epimerase protein [Sinorhizobium meliloti 1021] gi|307300906|ref|ZP_07580675.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] gi|307320723|ref|ZP_07600135.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|7387853|sp|O54067|LPSL_RHIME RecName: Full=UDP-glucuronate 5'-epimerase; AltName: Full=UDP-glucuronic acid epimerase gi|15074015|emb|CAC45662.1| UDP-glucuronate 5'-epimerase [Sinorhizobium meliloti 1021] gi|306893650|gb|EFN24424.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|306903861|gb|EFN34447.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] Length = 341 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 122/240 (50%), Gaps = 19/240 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFL 55 MR ++TG AGFIG + + L+++ V+ D +T ++ +LKE + +SN F + Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHF-VVGFDGMTPYYDV-TLKERRHAILQRSNGFKAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR + A + +P+ I++ AA++ V S+ ++ N++G+ W Sbjct: 59 TAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L K + L + ST +YG+ +K F+E D P + Y+ATK S + + ++ H Sbjct: 109 NMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + + + G + +YG+G+ RD+ Y++D V ++ Sbjct: 169 LYKVPTTSFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESI 228 >gi|307726080|ref|YP_003909293.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] gi|307586605|gb|ADN60002.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] Length = 363 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 139/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVTQGH-DVLCVDNF-YTGTKDNIAHLLDCANFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAINM----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG ED P P S Y K ++ L + + +G Sbjct: 109 KRVKAKIFQASTSEVYGDALVHPQKEDYWGHVNPIGPRSCYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + + G + LYGDG R + YV+D + A Sbjct: 169 LSIRIARIFNTYGPRMHPADGRVVSNFMMQALRGEPLTLYGDGSQTRSFCYVDDMIDAFI 228 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G +E +I I I S S EL D P H + Sbjct: 229 RLMNCADDPGGPVNLGNPHEVSMREIAERI-----VAITGSNSPLELHPLPTDDPWHRQ- 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +GW PQ +++ GL +T ++ Sbjct: 283 --PDISRARELLGWQPQTSLDEGLEQTARYF 311 >gi|108514868|gb|ABF93219.1| putative dTDP-glucose 4,6-dehydratase [Campylobacter jejuni] Length = 138 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M ++VTGGAGFIGS Y + +++ +D LTYA N+++L ++ + + F+Q DI Sbjct: 1 MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNLNKLKNNPNYVFIQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +++ +A++NFAAESHVD SI D FI TNI GT+ LL W Sbjct: 61 SDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNIYGTWNLLNSAYKTWFLEP 120 Query: 120 QDKKDQFR 127 KKD+F+ Sbjct: 121 FLKKDEFK 128 >gi|114579319|ref|XP_001164597.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] Length = 365 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 35 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 92 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 93 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 135 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 136 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 195 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 196 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 254 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 255 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 306 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 307 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 336 >gi|65317432|ref|ZP_00390391.1| COG1087: UDP-glucose 4-epimerase [Bacillus anthracis str. A2012] Length = 338 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+ GS C L+N+ +++V+D L+ + +LN +KEI+ F F + + Sbjct: 1 MAILITGGAGYXGSHTCVELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FEFYKEN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII +L C Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 K + F+ S+ VYG +E+ P + ++PY TK + + V + Sbjct: 110 VMQKHNVKNFIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VLK I E YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLKTKGI-EAYNLGTGKGYSVLEMVKAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKVIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNN 331 >gi|302669766|ref|YP_003829726.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] gi|302394239|gb|ADL33144.1| NAD-dependent epimerase/dehydratase [Butyrivibrio proteoclasticus B316] Length = 329 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 42/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++I+TG +GF+G +YL + K + VL +D N + +I Q S +VD+ Sbjct: 3 KIIITGISGFVGHHFLQYLYDIRKEMDVLGLDISMPLYNTDKYGDILQ---ISIQKVDLL 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++E++PD +++ A+ S V S E N T ++ + ++ Sbjct: 60 DVNSVERIIQEYKPDYLLHLASFSSVAYSWEHPTESFMNN----------TNIFLNVVNA 109 Query: 121 DKK--DQFRFLQISTDEVYGSLDKGLFSEDMPYN------PSSPYSATKASSDYLVLAWG 172 K R L + + E YG++ K +D+P P+SPY + S + L + Sbjct: 110 VAKYVPTCRILSVGSSEEYGNVGK----DDIPIKERQRLIPTSPYGVARVSQEMLSKLFV 165 Query: 173 HTYGIPVLLSNCSNNYGPYH--------FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 ++G+ ++L+ N+ GP+ F K++ + +++G+ + GD +RD++ Sbjct: 166 DSFGLDIILTRSFNHIGPWQDERFAIPSFVRKILDIKDRGLLKGT--IVTGDISVIRDFI 223 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V D VRA +L+L++G GE YNI R ++ I LD I S +L+ Sbjct: 224 DVRDVVRAYWLLLQRGTKGEIYNICSGKGRSLESVIESIATHLDLQIECSID-AKLV--- 279 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 RP + + +I +GW P+ + ++ + + N W L Sbjct: 280 --RPNENPIIIGANYRIYDSVGWKPEIPFDKTIDDIINEMVVRNKRWGTL 327 >gi|159046662|ref|YP_001542331.1| GDP-mannose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] gi|157914421|gb|ABV95850.1| GDP-mannose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] Length = 354 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 145/343 (42%), Gaps = 30/343 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 R ++TG G G+ L L+ V I + + + N + + Q F+ Sbjct: 3 RALITGVTGQDGAYLSELLLAK-GYDVHGIKRRSSSFNSARIDHLYQDPHEADRRFTMHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 62 GDMTDSTNLIRVVQEVQPDEIYNLAAQSHVQVSFDTPEYTANADAVGTLRLLEALRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +K RF Q ST E+YG + + SE P+ P SPY+A K + ++ + + YG Sbjct: 119 -LGMEKTT--RFYQASTSELYGLVQEVPQSETTPFYPRSPYAAAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV-----FLYGDGQNVRDWLYVEDHVR 231 I N+ P E + ITR + H+ F G+ RDW + D+V Sbjct: 176 IHASNGILFNHESPLR-GETFVTRKITRAVAAIHLGRQDRFYLGNLDAKRDWGHARDYVE 234 Query: 232 ALYLVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLLD----ALIPKSYSHTELIRFI 284 ++ ++++ + + G R +D F EIG L+ + K Y + + Sbjct: 235 GMWRIVQQDKAEDYVLATGETHTVRSFVDAAFAEIGVTLEWRGAGVDEKGYDTADGTLRV 294 Query: 285 EDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVC 322 E P + R + D SK E+GW + +++ V Sbjct: 295 EVDPRYFRPTEVDLLIGDPSKAHRELGWRHTTTLAEMVSEMVA 337 >gi|42518778|ref|NP_964708.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|41583064|gb|AAS08674.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] Length = 330 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 46/345 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R L+ + V+V+D L Y G+ ++ + ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRKLIEEGN-DVVVLDSL-YTGHRKAVDKRAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTNLVSKILRDENIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAM--------D 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +ED P +P +PY TK + ++ GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPKTLPITEDTPLDPINPYGETKMMMEKIMHWADKADGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAISGDGNFTIFGDDYDTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V++ + + +N+G N++I+ + IP + Sbjct: 225 QVEDLIDAHILALKHVMETNK-SDVFNLGTAQGYSNLEILEAAKKVTSIDIPYTIG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DSSK + +GW P+ EN++ + W+ Sbjct: 280 ----PRRGGDPDSLVADSSKARKVLGWKPKHENVDDVIATAWNWH 320 >gi|260203256|ref|ZP_05770747.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis K85] gi|289572692|ref|ZP_06452919.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis K85] gi|289537123|gb|EFD41701.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis K85] Length = 318 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 45/343 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDI 59 M++ +TG G +GS L L L YA I S+L F+ +VDI Sbjct: 1 MKVWITGAGGMMGSHLAEML--------LAAGHDVYATYCR--PTIDPSDLQFNGAEVDI 50 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ F+PDA+ + AA+S+ S E +TTN++GT I+ E R Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR------- 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + YG +D +E P PY +KA++D LV + +YG+ Sbjct: 104 -RVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLVYQYHKSYGM 162 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLA-----ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +++ N GP + L + E S + + G+ + R + V D RA Sbjct: 163 HTVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRA 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPG 289 L L+L KG G YN+GG+ I +E+G +L +I + +++ ++ RP Sbjct: 222 LMLMLDKGEAGADYNVGGS-------IAYEMGDVLKQVI-AACKRDDIVPEVDPALLRPT 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ D SK+ + GW E L +T+ D +WR Sbjct: 274 DEKIIYGDCSKLAAITGW----QQEICLTQTIADMFD---YWR 309 >gi|329113551|ref|ZP_08242331.1| Hypothetical protein APO_0323 [Acetobacter pomorum DM001] gi|326697073|gb|EGE48734.1| Hypothetical protein APO_0323 [Acetobacter pomorum DM001] Length = 339 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 148/336 (44%), Gaps = 28/336 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 + L+VTG AGF+G + + L+ + QV+ +D L Y L L + FSF Sbjct: 16 LTLLVTGAAGFVGFHVTQALLARGE-QVIGVDNLNGYYNPQLKQARLALLEAHPQFSFYY 74 Query: 57 VDICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ E ++ L++ P + I +FAA++ V S+ F +N+ G +LE R Sbjct: 75 CDLDQPENLQE-LQKKAPNIEGIFHFAAQAGVRYSLKDPYIFADSNVRGHVAMLEFAREL 133 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGH 173 + F+ S+ VYG K FSE P + P S Y+ TK +++ A+ H Sbjct: 134 PALK--------HFVYASSSSVYGRNRKLPFSETDPVDHPGSFYAVTKRAAELASSAYSH 185 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y IP YGP+ P+ + EG V LY RD+ Y++D V A+ Sbjct: 186 LYNIPQTGLRFFTVYGPWGRPDMAYYSFARAITEGRDVTLYEGASLARDFTYIDDVVAAV 245 Query: 234 YLVLKKGRIGERYNIG--GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 V ++ + GN+ + + + E L+ ++ IR++ RP D Sbjct: 246 LAVYEQAPPAAEPRVLNIGNHHPEPVKYLVE-------LLEQTLGRKAAIRYL-PRPESD 297 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + D + I+ GW PQ +E G+ + W+ D Sbjct: 298 VEKTWADITAIQQLTGWTPQTTLEEGIPEFTRWFQD 333 >gi|313126444|ref|YP_004036714.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] gi|312292809|gb|ADQ67269.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] Length = 351 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 93/359 (25%), Positives = 152/359 (42%), Gaps = 54/359 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS--FLQVDIC 60 ++VTGGAGF+GS Y + V +D L+ L E + ++ +++ + Sbjct: 7 VLVTGGAGFVGSHAVEYYA-ERGSDVTALDNLSRTETLEKADESRNTAAYNWNYIEENYP 65 Query: 61 DRECIRSALKEFQP--------DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 D E + + +++F+ DAIV+ A + V S+ N GTF +LE R Sbjct: 66 DVELVEADIRDFETLESIVEGHDAIVHTAGQVAVTASLTDPRTDFEVNAEGTFNVLEAAR 125 Query: 113 LWWSCLSQDKKDQFRFLQI-STDEVYGS---------------LDKGLFSEDMPYNPS-- 154 K D + + ST++VYG+ D F +P S Sbjct: 126 ---------KADSDPAVVVASTNKVYGNNVNEIPVREEENRYWYDDSDFENGIPETLSID 176 Query: 155 ----SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMI 206 +PY +K ++D V + + S YG F + + AI+ + Sbjct: 177 GCEHTPYGVSKLTADLYVQDYAERGAVDAAAFRMSCIYGTRQFGNEDQGWVAHFAISTLR 236 Query: 207 EGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGF 265 + + ++GDG+ VRD LYV+D +RA L YNIGG E + F Sbjct: 237 D-EPLTIFGDGKQVRDVLYVKDLIRAYDAFLSDPEDKPAVYNIGGGAENTTSLLEF---- 291 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 LD L K+ + T+ I + E R G + Y D+S+ + + W Q + E G+ + V WY Sbjct: 292 -LDILESKTGTRTD-ISYDEWREGDQKVYVSDTSRAREHLDWEAQVSFEEGIERFVDWY 348 >gi|225010775|ref|ZP_03701244.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-3C] gi|225005146|gb|EEG43099.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-3C] Length = 342 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 159/359 (44%), Gaps = 59/359 (16%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VND-----LKIQVLVIDKLTYAGNL--N 41 M ++VTG AGFIG +C+ L +ND LK L + A L N Sbjct: 1 MNILVTGAAGFIGFHVCQQLLSEGHSVVGLDNINDYYELGLKYARLEALGIPNASELPYN 60 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + ++ FSF++++I DRE + S D + N AA++ V SI + +I +NI Sbjct: 61 ETIKTHKNQKFSFVKLNIEDRENLPSLFANQSFDVVCNLAAQAGVRYSIENPETYIDSNI 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PS 154 +G +LE +C K + S+ VYG +ED+P++ P Sbjct: 121 VGYLNILE------ACRHHSVK---HLVYASSSSVYG------LNEDIPFSTEQQVDRPI 165 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+A+K S++ + + H YG YGP+ P+ + L M+E + ++ Sbjct: 166 SLYAASKKSNELMAHTYSHLYGFCTTGLRFFTVYGPWGRPDMALFLFTKAMLEDHPIAVF 225 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKKGRIGER---------YNIGGNNERKNIDIVFEIGF 265 G RD+ Y++D + + ++ + G+R YNIG ++ + + I Sbjct: 226 NQGNMSRDFTYIDDICKGVTTIINE-YTGDREKANAYYKLYNIGNSSP---VALTEFIEA 281 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +AL K+ + + + + G + D S ++ + + P ++ G+ + + WY Sbjct: 282 IEEALGKKAIKNLQPM-----QAGDVAKTWADVSGLEKDYNYHPNTPVKEGIKQFIDWY 335 >gi|237807051|ref|YP_002891491.1| NAD-dependent epimerase/dehydratase [Tolumonas auensis DSM 9187] gi|237499312|gb|ACQ91905.1| NAD-dependent epimerase/dehydratase [Tolumonas auensis DSM 9187] Length = 335 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 150/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M +VTG AGFIG + L+ QV +D L Y NL + L + F F++ Sbjct: 1 MHYLVTGAAGFIGFHVAERLLAAGH-QVTGLDNLNDYYDVNLKLSRLALLQAHPAFHFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR + Q +++ A++ V S+ + N++G +LE R Sbjct: 60 GDLADRTLMADLFTNGQFRRVIHLGAQAGVRYSLDNPHAYADANLVGHLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q K + L S+ VYG K FS D +P S Y+ATK +++ + ++ H Y Sbjct: 116 ---QHKIEHL--LYASSSSVYGLNRKTPFSVNDSVDHPVSLYAATKKANELMSHSYAHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++ G + +Y G+ RD+ +++D A+ Sbjct: 171 GLPCTGLRFFTVYGPWGRPDMALFKFTKAILAGQPIDVYNFGEMKRDFTFIDDIAEAIIR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G E YNIG + + + E+ L IP Sbjct: 231 LAEVIPQPNAEWTVETGSPAESSAPYRVYNIGNSQPVELKTFIHELEQALG--IPAQ--- 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG + D+S +++ IG+ PQ + SGL + V WY Sbjct: 286 ---MNLLPLQPGDVLETSADTSALETVIGFKPQTPLASGLARFVSWY 329 >gi|162452033|ref|YP_001614400.1| UDP-glucose 4-epimerase [Sorangium cellulosum 'So ce 56'] gi|161162615|emb|CAN93920.1| UDP-glucose 4-epimerase [Sorangium cellulosum 'So ce 56'] Length = 348 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 27/328 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TGGAGFIGS L L + +V V+D L G +L + +L + DI D Sbjct: 5 RYLITGGAGFIGSNLVAALTAAGE-RVRVLDNLA-TGRWENLDGLPHQSLIERITGDIRD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +A K + I++ AA V RS+ E + N+ GT +L+ R Sbjct: 63 AAAVATAAKGVE--VILHQAALGSVPRSVESPIESNSVNVGGTVTVLDVAR--------- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 ++ R L ++ YG E M P SPY+ TK + ++ + + YGI L Sbjct: 112 RQGVRRVLFAASSSAYGETPVLPKHEGMEPMPLSPYAVTKLACEHYMKVFAGIYGIETLS 171 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGS----HVFLYGDGQNVRDWLYVEDHVRA--LYL 235 N +GP P+ AI R ++ + + ++GDG+ RD+ ++E+ V A L Sbjct: 172 LRYFNVFGPNQTPDGAYAAAIPRFVDAALQNRPIPIFGDGEQTRDFCFIENTVLANLLGA 231 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 K GE NI G ++ EI ++ + + R G R Sbjct: 232 TSSKKFKGEVINIAGGRRIGLNELCKEIS--------RALGRDVAVEHLPARAGDIRHSL 283 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D S+ IG+ P+ E G+ TV + Sbjct: 284 ADISRAAELIGYEPRVRWEDGIVPTVTY 311 >gi|307353554|ref|YP_003894605.1| NAD-dependent epimerase/dehydratase [Methanoplanus petrolearius DSM 11571] gi|307156787|gb|ADN36167.1| NAD-dependent epimerase/dehydratase [Methanoplanus petrolearius DSM 11571] Length = 322 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 147/337 (43%), Gaps = 32/337 (9%) Query: 2 RLIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++TG +GF+G Y+ N ++ I + A + + F + D+ Sbjct: 3 KILITGISGFVGGHFVDYINKNHSDFEIYGISRGKPAWDF-----VDNPGFHKFYKADLK 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + +KE +PD I++ AA+S V S E N+ ++E R Sbjct: 58 DLLKIETIIKEIEPDYILHLAAQSSVAESWNTPVESFMNNMNAFLNIIETVR-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R L + + E YG + + SED+ P +PY+ + S + L + YG+ Sbjct: 110 HNELNTRILSVGSSEQYGIIPEEDLPVSEDVQQRPGNPYAVARVSQENLAGVYAKGYGLD 169 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-----VFLYGDGQNVRDWLYVEDHVRAL 233 + + N+ GP ++ + + + + V G+G +RD+L V D V A Sbjct: 170 ICCTRSFNHCGPGQKDNFVVSSLVKQFVMIAKGLQEPVLHIGNGAVIRDFLDVHDVVEAY 229 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIG--FLLDALIPKSYSHTELIRFIEDRPGHD 291 + +L KG+ GE YNI R +DI+ + + +D I + S RP + Sbjct: 230 FSLLSKGKSGEAYNICSGVGRSIVDIIEMLSGIYGIDVEIRQEASRL--------RPADN 281 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R + KI + GW P+ + E L ++V Y D++ Sbjct: 282 PRIIGSNKKICRDTGWKPKISFEETL-RSVYDYWDSH 317 >gi|220910181|ref|YP_002485492.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] gi|219866792|gb|ACL47131.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] Length = 329 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 67/356 (18%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+V+D L Y G+ ++++ Q L DI DR Sbjct: 5 ILVTGGAGYIGSHAVLSL-KQAGYSVIVLDNLVY-GHRELVEDVLQVKLIGG---DINDR 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + Q +A+++FAA ++V S+ ++ N+ GT LLE + + +S Sbjct: 60 ALLDQIFAQHQIEAVMHFAAYAYVGESVTNPAKYYRNNVAGTLTLLEA--MVAAGVS--- 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + + ST YG + E P NP +PY +K + ++ + H YG+ + Sbjct: 115 ----KLVFSSTCATYGVPQQLPIPETHPQNPINPYGMSKLMVEAMLTDFDHAYGLRSVRF 170 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 171 RYFNAAGADPSGRLGEDHNPETHLIPLVLLTALGKRESISVFGQDYDTPDGTCIRDYIHV 230 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D HV+ L +L+ G E +N+G N D++ + IP + Sbjct: 231 TDLAEAHVQGLAYLLEGGAT-EVFNLGNGNGFSVQDVIATAARVTGRSIP--------VV 281 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 + RPG D + S+ S+I LN W+PLY EL Sbjct: 282 MADRRPG-DPAVLVGSAVKASQI-----------LN------------WKPLYPEL 313 >gi|13377576|gb|AAK20805.1|AF332602_1 CDP-tyvelose epimerase [Salmonella enterica subsp. enterica] Length = 338 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L++TGG GF+GS L + ++ I ++V D L+ G ++L +S F F+ DI Sbjct: 1 MKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + + ++ PD+ + A + + SI N+ GT LLE R + S Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS---- 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASS 164 + ST++VYG L++ ++E D P Y+ S SPY +K ++ Sbjct: 116 ----NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIE-----GSHVFLYGD 216 D +L + +G+ ++ S+ YG F + + + +E + G+ Sbjct: 172 DQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN 231 Query: 217 GQNVRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + VRD L+ ED + + L +I G +NIGG IV + L + + Sbjct: 232 CKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-------IVNSLSLLELFKLLED 284 Query: 275 YSHTELIRF--IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y + ++ RF + R R + D KI + I W P+ + + G+ K W Sbjct: 285 YCNIDM-RFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW 334 >gi|224477549|ref|YP_002635155.1| putative UDP-glucose 4-epimerase [Staphylococcus carnosus subsp. carnosus TM300] gi|222422156|emb|CAL28970.1| putative UDP-glucose 4-epimerase [Staphylococcus carnosus subsp. carnosus TM300] Length = 311 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 153/332 (46%), Gaps = 27/332 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++ GG+GFIGS + N+ +V ++D L+ G ++ I +++ F D+ Sbjct: 1 MKVLIIGGSGFIGSHIAEKWHNEGH-EVFIVDNLS-TGKRENVPFIDEAH---FYHDDVK 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I +++ Q D I + AA V ++ E NI T LLE R + + L Sbjct: 56 NFDLITELVQKHQFDYIFHMAAMVSVVETVEKPLESNGDNIDSTIHLLEANRQYNNNLK- 114 Query: 121 DKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 +F S+ +YG L D E NP SPY+ K + + + YG+P Sbjct: 115 ------KFFFASSAAIYGDLPDLPKSVETSNINPLSPYAVQKFAGEQYTKIYHSLYGLPT 168 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP PE ++ + + + + +GDG+ RD++Y++D ++A+++ Sbjct: 169 VALRFFNVYGPRQNPESDYSGVLSIMNQKFLNKAPFTFFGDGKQTRDFIYIKDLLQAIWI 228 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V++ G+ YN G N+ I + +P S F E R G D ++ Sbjct: 229 VIQDDATNGKVYNAGTGNQTDLITVFNAFADYFRYEVPYS--------FEEARAG-DIKH 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +++G+ P+ ++ G+ + + + D Sbjct: 280 SYSDVTPLNDLGFNPEYDVMKGIAEYLKYNQD 311 >gi|215406100|ref|ZP_03418281.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis 02_1987] gi|289747879|ref|ZP_06507257.1| GDP-mannose 4,6-dehydratase [Mycobacterium tuberculosis 02_1987] gi|289688407|gb|EFD55895.1| GDP-mannose 4,6-dehydratase [Mycobacterium tuberculosis 02_1987] Length = 318 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 45/343 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDI 59 M++ +TG G +GS L L L YA I S+L F+ +VDI Sbjct: 1 MKVWITGAGGMMGSHLAEML--------LAAGHDVYATYCR--PTIDPSDLQFNGAEVDI 50 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ F+PDA+ + AA+S+ S E +TTN++GT I+ E R Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR------- 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + YG +D +E P PY +KA++D L + +YG+ Sbjct: 104 -RVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGM 162 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLA-----ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +++ N GP E L + E S + + G+ + R + V D RA Sbjct: 163 HTVVARIFNCTGPRKVGEALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRA 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPG 289 L L+L KG G YN+GG+ I +E+G +L +I + +++ ++ RP Sbjct: 222 LMLMLDKGEAGADYNVGGS-------IAYEMGDVLKQVI-AACKRDDIVPEVDPALLRPT 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ D SK+ + GW E L +T+ D +WR Sbjct: 274 DEKIIYGDCSKLAAITGW----QQEICLTQTIADMFD---YWR 309 >gi|163849948|ref|YP_001637991.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661553|gb|ABY28920.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 356 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGFIGS L L+ +V+ +D G ++L +++ F ++ D+ Sbjct: 14 VLVAGGAGFIGSHLVDALLAR-GARVVALDSF-LTGRRDNLAHLAREPRFELVEADVTR- 70 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 L F D I N A + + T+++GT LLE Sbjct: 71 --PLPPLPRF--DRIFNLACAASPPHYQADPMHTMMTSVVGTNHLLERA----------N 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 D RFLQ ST EVYG + +E P P + Y K S++ L + + + Sbjct: 117 DDGARFLQASTSEVYGDPEVHPQTESYWGNVNPTGPRACYDEGKRSAETLAYDFERVHRL 176 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP + +++ + + + G + +YG+G+ R + Y D V L Sbjct: 177 DVRVARIFNTYGPRMRADDGRVVSNVVCQALAGEPITVYGNGEQTRSFCYAADLVEGLMR 236 Query: 236 VLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHDR 292 ++ G N+G E + L+D + + + + ++R D P + Sbjct: 237 LMDHEISPGGPVNLGNPCE-------MTVAELVDLVTRMTGTRSAVVRRPLPVDDP---Q 286 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D ++ ++ +GW PQ +E GL T+ W+ Sbjct: 287 RRRPDITRAETLLGWSPQVPLEQGLEATIAWF 318 >gi|56421217|ref|YP_148535.1| nucleotide sugar epimerase [Geobacillus kaustophilus HTA426] gi|56381059|dbj|BAD76967.1| nucleotide sugar epimerase [Geobacillus kaustophilus HTA426] Length = 314 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 27/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-TYAGNLNSLKEISQ--SNLFSFLQV 57 M+++VTGGAGFIGS L L ++ +V ID Y ++ + Sbjct: 1 MKIVVTGGAGFIGSHLAARL-HEQGHEVAAIDCFHPYYPVERKERQFHALTGGRVPLARF 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E + +F+PD + + AA V S+ +I +I T +L Sbjct: 60 DLLDGEATKRWFSQFRPDVVYHLAALPGVPYSLAHPLAYIDYDIKATVNVLA-------- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYG 176 + + L S+ VYG E+M SPY+A K ++ A+ H YG Sbjct: 112 -AAGEAGVAHVLFASSSSVYGDRGNVPLREEMADGRVVSPYAAAKYGAESFCHAYAHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + YGP+ P+ I + R++ G + +YG G RD+ Y++D V Sbjct: 171 YQMTIFRYFTVYGPWGRPDMAIGTFLRRLLAGEEIVVYGKG-TARDYTYIDDIV------ 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRPGHDRRY 294 +G I + GG +E N+ + ++ L+ + H ++ + +R G + Sbjct: 224 --EGMIAALHRSGGRSEVFNLGAGAPV--TMEQLLAELRKHFPDLKIVHAPERKGDVKAT 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +K + G+ P+ GL +TV W Sbjct: 280 WADITKAERAFGYKPKVAFAEGLARTVAW 308 >gi|237809594|ref|YP_002894034.1| NAD-dependent epimerase/dehydratase [Tolumonas auensis DSM 9187] gi|237501855|gb|ACQ94448.1| NAD-dependent epimerase/dehydratase [Tolumonas auensis DSM 9187] Length = 334 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKE-----ISQSN 50 M+ +VTG GFIGS + + L N V+ ID NLN SLKE +S+ Sbjct: 1 MKYLVTGATGFIGSNVVQRLCNAGH-DVIGID------NLNDYYEVSLKEARLDLLSKFK 53 Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F+++D+ DR I + + +++ AA++ V S+ + +N+IG +LE Sbjct: 54 NFRFIKLDLADRAGIAELFAKEKFQRVIHLAAQAGVRYSLDNPMAYADSNMIGHLTILEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + S+ VYG K FS D +P S Y+ATK +++ + Sbjct: 114 CR---------HNSVEHLVYASSSSVYGLNSKLPFSTADSVDHPVSLYAATKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H YGIP YGP+ P+ + ++ G + +Y +G RD+ Y++D Sbjct: 165 TYSHLYGIPTTGLRFFTVYGPWGRPDMALFKFTKAILAGKAIDVYNNGNLSRDFTYIDDI 224 Query: 230 VRALYL---VLKKGRIG---------------ERYNIGGNNERKNIDIVFEIGFLLDALI 271 V + V+ K + G YNIG + K +D + + L + Sbjct: 225 VEGIIRIADVVPKAQEGWTPETGSPANSSAPYRVYNIGNGSPVKLLDFIEALETSLGMVA 284 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ + +PG ++ + G+ PQ ++ G+ + V WY Sbjct: 285 EKN--------MLPMQPGDVHATWAETEDFFAATGYRPQVGVQEGVARFVEWY 329 >gi|81883281|sp|Q5PQX0|UXS1_RAT RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UGD; Short=UXS-1 gi|56270309|gb|AAH86988.1| UDP-glucuronate decarboxylase 1 [Rattus norvegicus] gi|149028247|gb|EDL83685.1| rCG44979, isoform CRA_a [Rattus norvegicus] Length = 420 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|329667673|gb|AEB93621.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 48/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAM--------D 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K ++ S+ YG +ED P +P +PY TK + ++ + GI Sbjct: 106 DAKVKYLVFS-SSAATYGIPKTLPITEDTPLDPINPYGETKMMMEKIMHWADNADGIKSI 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 V ++ + G H PE LIP + I G F ++G DG NVRD++ Sbjct: 165 ALRYFNVAGASSDGSIGEDHGPETHLIPNILKSAISGDGNFTIFGDDYDTKDGTNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+ AL V++ + + +N+G N++I L+A K + ++ Sbjct: 225 QVEDLIDAHILALKHVMETNK-SDVFNLGTAQGYSNLEI-------LEAA--KKVTSIDI 274 Query: 281 IRFIEDRPGHDRRYAI-DSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 I R G D + DSSK + +GW P+ EN++ + W+ Sbjct: 275 PYTIGPRRGGDPDSLVADSSKARKVLGWKPKHENVDDVIATAWNWH 320 >gi|10334815|gb|AAG16750.1|AF277002_2 UDP-galactose 4-epimerase GalE [Rhodococcus equi] Length = 283 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 34/267 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG++GS +C ++ + +V+V+D L+ GN +++ ++ F++ DI Sbjct: 1 MRLLVTGGAGYVGS-VCTTVLLERGHEVVVVDDLS-TGNADAVPAGAE-----FIEGDIA 53 Query: 61 D--RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + S + D +++FAA+S V S+ +++ N++ T LLE RL + Sbjct: 54 AVAGSVLGSGNSTPRFDGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTP- 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST YG ++ +ED P P++PY ATK + D+ + ++ + + + Sbjct: 113 --------RLVFSSTAATYGEPERTPITEDAPTRPTNPYGATKLAIDHAITSYANAHSLA 164 Query: 179 VLLSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y LIPL + + + + ++G DG VRD++ Sbjct: 165 ATSLRYFNVAGAYRGAGENRVVETHLIPLVLQVALGQREKISVFGTDWPTKDGTAVRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIGER--YNIG 249 +V D A L L+ G YN+G Sbjct: 225 HVLDLADAHLLALESSVPGHHRIYNLG 251 >gi|28076899|ref|NP_080706.1| UDP-glucuronic acid decarboxylase 1 [Mus musculus] gi|81879685|sp|Q91XL3|UXS1_MOUSE RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UGD; Short=UXS-1 gi|15150358|gb|AAK85410.1|AF399958_1 UDP-glucuronic acid decarboxylase [Mus musculus] gi|23331212|gb|AAH37049.1| UDP-glucuronate decarboxylase 1 [Mus musculus] gi|26344650|dbj|BAC35974.1| unnamed protein product [Mus musculus] gi|148664488|gb|EDK96904.1| UDP-glucuronate decarboxylase 1, isoform CRA_b [Mus musculus] Length = 420 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|167412349|gb|ABZ79811.1| nucleotidyl-sugar pyranose mutase [Campylobacter jejuni] Length = 318 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 42/335 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG+GF+GS LC+ L+ +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 4 ILITGGSGFLGSNLCKRLLGGDN-KIVCVDN-NYTGRMENIKELLENENFTFIEHDICEP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCLSQ 120 I L D I NFA + + G TT ++ G +LE Sbjct: 62 LKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ LQ ST EVYG D + ++ Y NP + Y K ++ L + Sbjct: 107 -KEHNATILQASTSEVYG--DPLVHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFDYHR 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 GI + + N YG P +++ I + + G + +YGDG R + YV+D + Sbjct: 164 YEGIDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDDLID 223 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + V+ + N G E F I L +I K+ S +++I +D P Sbjct: 224 IIIKVMNSSKNFQGPINTGNPGE-------FTIKELAQKIIEKTGSKSKII--YKDLPLD 274 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 275 DPTQRRPDISLAKAKFNWEPKINLDEGLEKTIKYF 309 >gi|161527634|ref|YP_001581460.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338935|gb|ABX12022.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 314 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 155/333 (46%), Gaps = 36/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++++TG GFIGS L YL N+ I L + + + N+N LK+ + NL ++DI Sbjct: 4 VKVLLTGANGFIGSHLADYLYNNYDI-FLAVREFSNISNINHLKD--KVNL---SKLDIT 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-LWWSCLS 119 + + I++ L E +PD +++ A E+ +S + N T LE R L C Sbjct: 58 NFKEIQNLLNEIKPDVVIHLAGETSHSKSFEDPIHDVEVNSKSTLYFLESIRKLQLKC-- 115 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 F+ ST V G +E P++ Y+ + SS++ + Y + Sbjct: 116 -------TFILGSTFIVIGKPISLPVNEKSVCIPTTIYATNRLSSEHFCKIYHQVYDMDC 168 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + +N++GP + + I + G + ++ DG+ RD +YV+D V + + Sbjct: 169 RIFRITNSFGPREKTISSKNAVNFLIYQAYSGKEITVFNDGEFFRDLIYVKDVVSGIETI 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR--- 293 +K G+ GE Y I + + E G +L L + + FI P + ++ Sbjct: 229 MKNGKNGELYWISSHQKT----WFKEFGKILHELT------SSPLNFIPP-PEYTKKVDV 277 Query: 294 --YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D+SK+KS +GW P+ ++ G+ +T+ ++ Sbjct: 278 GNFLADNSKLKS-LGWEPKYSLRDGIIETLDYF 309 >gi|29827552|ref|NP_822186.1| UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] gi|29604652|dbj|BAC68721.1| putative UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] Length = 264 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 23/264 (8%) Query: 5 VTGGAGFIGSALCRYLV-NDLKIQVLV-IDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 VTG GFIGS L LV + +++ + + + G L +L +++ +++ D+ Sbjct: 9 VTGAEGFIGSHLTEALVASGHRVRAMAQYNSFSSYGWLETLP----ADVLDHVEIVLGDV 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R ++ D + + AA + S ++ TN+ GT +LE R + Sbjct: 65 RDPGSVRGLVEGA--DCVYHLAALIAIPYSYQAPHSYVDTNVTGTLNVLEAVRALGTP-- 120 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST E YG+ +ED P N SPY+A+KA D L ++ ++ PV Sbjct: 121 -------RLVHTSTSETYGTAQTVPITEDHPINTQSPYAASKAGGDRLADSYHASFDTPV 173 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + N +GP +IP I ++ G+ GD + RD+ YV+D +A V Sbjct: 174 VTLRPFNTFGPRQSMRAVIPSVIGQVAAGARTLTLGDLRPTRDFTYVKDTAQAFLAVGTA 233 Query: 240 GR---IGERYNIGGNNERKNIDIV 260 +G +N G E D+V Sbjct: 234 PAAQVVGRTFNAGTGGEISVGDLV 257 >gi|303257182|ref|ZP_07343196.1| NAD dependent epimerase/dehydratase family protein [Burkholderiales bacterium 1_1_47] gi|302860673|gb|EFL83750.1| NAD dependent epimerase/dehydratase family protein [Burkholderiales bacterium 1_1_47] Length = 339 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/346 (27%), Positives = 144/346 (41%), Gaps = 60/346 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R V GGAGFIG+ L L+ D + QV D L+ GNL ++ E+ Q + SF + DI + Sbjct: 17 RSAVFGGAGFIGTNLVYQLIEDGQ-QVFNFDNLSGLGNLLNIAELMQQSRHSFARCDIAN 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E IR AL D I F D F T E + W + ++ Sbjct: 76 PEEIRQALLMAAADTIY-FCITPKNPEEESSLDNFRT--------FFETVKEWRNGMTDT 126 Query: 122 K--------KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 K + ++ L YG + GL L L G+ Sbjct: 127 KIHKIVVVVSEHYKLLG-----SYGHMYAGL----------------------LKLLDGY 159 Query: 174 TY-GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+P+ +GP+ P+ I + I R IEG + + + V D +YV+D V A Sbjct: 160 VADGLPISSLLVPPAFGPFQQPDSPISMIIYRAIEGETIPVVNPEEKVSDLVYVKDVVDA 219 Query: 233 LYLVLKKGRIGERYNIGGN----NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + +V K G+IG Y++ G + + D++ E L + L P + LI + P Sbjct: 220 IVIVEKNGKIGGHYHLAGPSCALSNLEAADVICE--SLNEELPPPVGRYQALIEEVATAP 277 Query: 289 GHDRRYAIDSSKIKSE---IGWFPQENMESGLNKTVCWYLDNNWWW 331 D SK ++ +G + ++E L KTV WYL+N W+ Sbjct: 278 -----VTSDISKDEATLVVLGLQGKTSLEDALKKTVNWYLNNPRWY 318 >gi|332256763|ref|XP_003277484.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Nomascus leucogenys] Length = 420 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|220928402|ref|YP_002505311.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum H10] gi|219998730|gb|ACL75331.1| NAD-dependent epimerase/dehydratase [Clostridium cellulolyticum H10] Length = 342 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 155/355 (43%), Gaps = 47/355 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF------ 54 M+++VTGG GF+GS +C Y +N +V+ D +T L + + ++ +++ Sbjct: 1 MKVLVTGGCGFLGSNVCEYYINK-GAKVISYDNMTKHELLKTGFAVDKARNYNYEYQQKL 59 Query: 55 -LQVDICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 ++ I D + L Q D I++ AA+ + S TTN +GTF +LE R Sbjct: 60 GVKTVIGDVRNLEELLDNAQGCDYIIHTAAQPAMTISWEDPALDFTTNALGTFNVLEAAR 119 Query: 113 ---LWWSCLSQD-----------KKDQFRFLQ--ISTDEVYGSLDKGLFSEDMPYNPSSP 156 + +C + K+ + R+L+ + DE Y +L+ + +P Sbjct: 120 RLKIPVACCATVHVYGNEINLSLKEGEKRYLREPEAIDETYPTLEGVI----------TP 169 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVF 212 A+KAS D V A+ TYG+ + YG F + + AI R + G + Sbjct: 170 LHASKASGDIYVKAYIDTYGLEAASFRLTGIYGEKQFGGEDHGWVANFAI-RTVLGWPIT 228 Query: 213 LYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 ++G G+ VRD LYV D V A + K R YNIGG + I ++ I L D Sbjct: 229 IFGAGKQVRDILYVSD-VCAAFDAFYKTRSSGIYNIGGGTQTA-ISLLDCIDILEDI--- 283 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + F DR G R + D SK E+GW P G+ + W +N Sbjct: 284 --NGKRPEVNFAPDRHGDLRYFICDISKANKELGWKPAVMPHEGIRNLMNWIKEN 336 >gi|113953729|ref|YP_729470.1| WbnF [Synechococcus sp. CC9311] gi|113881080|gb|ABI46038.1| WbnF [Synechococcus sp. CC9311] Length = 346 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 56/355 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-------EISQSNLFS 53 ++VTG AGFIG+ALC L+ +V+ ID L Y L + +S + +S Sbjct: 9 ILVTGAAGFIGAALCERLLQRGD-RVIGIDNLNDYYDPALKQARLARIETLAVSTAGAWS 67 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F ++ + D + + QP +VN AA++ V S+ +I +N++G +LE R Sbjct: 68 FHRLALEDGDALLKLFAAEQPRVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCR- 126 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWG 172 D + S+ VYG F E N P S Y+A+K +++ + + Sbjct: 127 ------HHGVDNLVY--ASSSSVYGGNRNLPFHEQQAVNHPVSLYAASKKANELMAHTYS 178 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVR 231 H YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V Sbjct: 179 HLYGLPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGKMQRDFTYIDDIVE 237 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDI------VFEIGFLLDALIPKSYSHTELIRFIE 285 VL+ N+ + + + VF IG + TEL+RFIE Sbjct: 238 G---VLRCCDQPATSNLDFDPMQPDPATAAAPHRVFNIG---------NSQPTELLRFIE 285 Query: 286 ----------------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A ++ +++ +G+ P +E G+ + WY Sbjct: 286 VMEQALGREAIKDFQPMQPGDVVATAANTEALETWVGFKPSTPIEEGIQRFADWY 340 >gi|117618758|ref|YP_857385.1| nucleotide sugar epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560165|gb|ABK37113.1| nucleotide sugar epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 337 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M +VTG AGFIGSA+ + L V+ ID L Y +L + L ++ + F F + Sbjct: 1 MHYLVTGAAGFIGSAVSQRLCQQGHT-VIGIDNLNDYYEVSLKESRLARLASESNFVFRK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + D +++ AA++ V S+ + +N+IG +LE Sbjct: 60 IDLADREGMAKLFTHERFDRVIHLAAQAGVRYSLENPFAYADSNLIGHLAILE------G 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG K F + D +P S Y+A+K +++ + + H Y Sbjct: 114 CRHTGVK---HLVYASSSSVYGMNGKMPFATTDAVDHPISLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ + M+ G + +Y +GQ RD+ Y++D V + Sbjct: 171 GIPTTGLRFFTVYGPWGRPDMALFKFTKAMLAGQPIDVYNNGQLSRDFTYIDDIVEGILR 230 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + +KG + +NIG + K + + DAL K+ Sbjct: 231 ISDVVPVANPDWQSEKGSPADSSAPYRIFNIGNGSPVKLMSFI-------DAL-EKALGI 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + G D+ + G+ P ++E G+ V WY Sbjct: 283 EAIKNMMPMQAGDVYATWADTDDLFKATGYRPAMSVEQGVQAFVDWY 329 >gi|229099878|ref|ZP_04230802.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-29] gi|228683624|gb|EEL37578.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-29] Length = 338 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FKFYNES 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + +A+++FA V S + NII T IL C Sbjct: 59 VLNREKMNEIFLGNNIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 K + +F+ S+ VYG +E+ P + ++PY TK + ++ G Sbjct: 110 VMQKHNVKKFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADGEW 169 Query: 178 PVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 + L N +G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLKELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL+ I + YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLETTGI-DAYNLGTGKGYSVLEMVNAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I RPG D SK K E+GW + +E + W ++N Sbjct: 285 -----YKIIGRRPGDVAICFADVSKAKRELGWEAEYGLEEMCLDSWRWQVNN 331 >gi|262282420|ref|ZP_06060188.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] gi|262261711|gb|EEY80409.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] Length = 339 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 48/335 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG+IG+ L+ + +++V+D + + +L ++++I + + +F +VDI Sbjct: 4 KILVTGGAGYIGTHTVVELIK-VGHEIVVVDNFSNSSKKSLEAVEKIVEQTI-TFYEVDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E + K+F+P +++FA V S + N+ GT LL Sbjct: 62 CDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLR---------V 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYG 176 ++ + + S+ VYG ED P + ++PY TK + + + T+ Sbjct: 113 MEEVNCKNIIFSSSATVYGDPHTVPILEDFPVSVTNPYGRTKLMLEEILTDIYKADSTWN 172 Query: 177 IPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG------DGQ 218 I +L ++ S + G P P L+P +A+ R+ V ++G DG Sbjct: 173 IVLLRYFNPIGAHESGDLGENPNGIPNNLLPYVTQVAVGRL---EQVQVFGNDYPTVDGT 229 Query: 219 NVRDWLYVEDHVRALYLVLKK--GRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D + LKK G+ G YN+G ++I+ + + IP Sbjct: 230 GVRDYIHVVDLAKGHVAALKKIEGKQGLNIYNLGTGKGYSVLEIIHSMEKAVGKPIP--- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + +E RPG + +K K+E+GW Q Sbjct: 287 -----YKIVERRPGDIATSYANPAKAKAELGWEAQ 316 >gi|209967266|ref|YP_002300181.1| dTDP-D-glucose 4,6-dehydratase, putative [Rhodospirillum centenum SW] gi|209960732|gb|ACJ01369.1| dTDP-D-glucose 4,6-dehydratase, putative [Rhodospirillum centenum SW] Length = 320 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D V+ +D + G +++ + F L+ D+ Sbjct: 7 RVLVTGGAGFLGSHLCDRLIADGN-DVICVDNF-FTGTKDNIAHLLGHPRFELLRHDV-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 63 -----TFPLYVEVDEIYNLACPASPVHYQNDPVQTTKTSVHGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R Q ST EVYG D+ SED P P + Y K ++ L + +G Sbjct: 108 KRLRARIFQASTSEVYGDPDQHPQSEDYRGNVNPIGPRACYDEGKRCAETLFFDYHRQHG 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + + + + + GDG+ R + YV+D + A+ Sbjct: 168 VDIRVARIFNTYGPRMHPNDGRVVSNFIVQALRNAPITIQGDGRQTRSFCYVDDLIDAIV 227 Query: 235 LVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 +++ +G G N+G E F I L D +I + S +EL+ D P Sbjct: 228 RLMQAPEGTTGP-VNLGNPGE-------FTIRELADQVIGLTGSRSELVYRPLPVDDP-- 277 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ ++ +GW P+ + GL +T+ ++ Sbjct: 278 -MQRCPDITRARTLLGWEPRVPLREGLERTIRYF 310 >gi|288560669|ref|YP_003424155.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium M1] gi|288543379|gb|ADC47263.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium M1] Length = 311 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 162/329 (49%), Gaps = 33/329 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS + L++D K V +ID L+ +G + +L + NL + ++ D+ D Sbjct: 6 VVVTGGLGFIGSHIVDALIDDNK--VTIIDNLS-SGKMENLNNPNHENL-TIIKEDLMDA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + LK+ D + + AA + V S+ + NI + +L+ +C + + Sbjct: 62 D-LEKILKD--KDYVFHLAALASVPGSVAEPLRYNQNNIDASL------KLFIACKNNNI 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K + + S+ VYG E + P SPY+A KAS + + ++ +YG+ + Sbjct: 113 K---KVIFSSSSAVYGENPNMPLKESENFLPCSPYAAQKASCELYLKSFHESYGLDYVAL 169 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP +IP I+ ++ G +YGDG+ RD++YV++ +A L + Sbjct: 170 RYFNVFGPRQDENSPYAAVIPKFISAILNGESPVIYGDGEQSRDFIYVKEIAKANILSAE 229 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAID 297 G G + I+ +FEI + D L +++ ++++++RPG + D Sbjct: 230 SDYNGVINVALG--KSMTINRLFEI--ISDVL------ESDIDVKYLDERPGDIKHSLAD 279 Query: 298 SSKIKSEIGWFPQEN-MESGLNKTVCWYL 325 S + +I + P E+ E L +TV W++ Sbjct: 280 ISNL-DKISFKPDEDKFEEQLRETVKWFI 307 >gi|238062696|ref|ZP_04607405.1| UDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149] gi|237884507|gb|EEP73335.1| UDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149] Length = 312 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 137/326 (42%), Gaps = 28/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ D +T +L++ + I Sbjct: 1 MRVLVTGGAGFIGSHLTDALLER-------GDSVTVLDDLSTGRPERLPAGVPLHHGSIT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + ++ +P+ I + AA++ V S+ A N++GT +LE R Sbjct: 54 DRAGLTRLAEQCRPEVICHLAAQADVRNSVADATSDTGVNVVGTVNVLEAARAI------ 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D S +YG +D+ ED+ P +PY A K ++ + + YG Sbjct: 108 ---DARVVFASSGGALYGEVDELPSPEDVRPAPWAPYGAAKYCAEQYLALYNRLYGSTHA 164 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P ++ + ++ G ++GDG+ RD++YV D V A L + Sbjct: 165 ALRLGNVYGPRQDPTGEAGVVSIFCGCLVAGRRPTVFGDGEQTRDYIYVADVVEAFLLAV 224 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G G +NIG I LLD L+ ++ RF R G + A++ Sbjct: 225 GHGGPG-LWNIGTGTS-------TSIRKLLD-LVGRTAGRVPDPRFEPPRLGELKHSALE 275 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 ++ E+ W + + G+ K W Sbjct: 276 VTRAARELRWAARTRLADGIAKVYKW 301 >gi|170740313|ref|YP_001768968.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168194587|gb|ACA16534.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 340 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/338 (23%), Positives = 138/338 (40%), Gaps = 38/338 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +V+ +D G +L+ + + F ++ D+ Sbjct: 9 VLVAGGAGFLGSHLCDALLARGD-RVIALDSF-LTGRRRNLRHLERDPRFDLVEHDVV-- 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +AL+ D + N A + + + T+++GT LL + Sbjct: 65 RPLPAALRRQTFDRVYNLACAASPPHYQADPEHTLLTSVLGTRHLLLAA----------E 114 Query: 123 KDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF Q ST EVYG + +G + P P + Y K + + L + + Sbjct: 115 ASGARFFQASTSEVYGDPEVHPQPEGYWGHVNPTGPRACYDEGKRAGETLCYDYARAGRV 174 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--- 232 V ++ N YGP + +++ + + + G + +YGDG R + YV D + Sbjct: 175 AVRVARIFNTYGPRMRADDGRVVSNVVCQALAGDAITVYGDGSQTRSFCYVADLIEGIIR 234 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---G 289 L L G N+G E D+V + + + P + RP Sbjct: 235 LSLHEAPGLAVPPVNLGNPVELTVSDLVARVLAMTGSASP-----------VVTRPLPTD 283 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 RR D ++ K +GW P +E GL T+ W+ D Sbjct: 284 DPRRRRPDIARAKELLGWSPAVPLEQGLKATILWFADE 321 >gi|114764086|ref|ZP_01443325.1| UDP-glucose 4-epimerase [Pelagibaca bermudensis HTCC2601] gi|114543444|gb|EAU46459.1| UDP-glucose 4-epimerase [Roseovarius sp. HTCC2601] Length = 327 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 53/349 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + +TY + K+ F Q ++ DR Sbjct: 4 VLVTGGAGYIGSHACKAL------KAAGFTPVTYDNLVTGWKD--SVKFGPFEQGELSDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++QP A+++FAA S V ++ + N+ G+ L+E CL+ Sbjct: 56 SRLDAVFAQYQPVAVMHFAALSQVGEAMSEPGRYWRNNVEGSLTLIEAATA-AGCLN--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E P P + Y A+K + + ++ +G YG+ ++ Sbjct: 112 -----FVFSSTCATYGEHDNVVLDEGTPQEPLNAYGASKRAVEDILRDFGAAYGLKSVIF 166 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--------YGDGQNVRDWLY 225 ++ G +H PE LIP+ + I+G L DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEHHRPETHLIPVML-EAIDGKRPALTINGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V D V A L LK G+ +N+G +++ G + + +P ++E R Sbjct: 226 VMDLVDAHVLGLKWLQDGKESRVFNLGTGKGFSVREVIDASGAVTNREVP----YSEGPR 281 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 R G + S++ +E+GW P + T+ + + W W Sbjct: 282 ----RAGDATKLVSGSTRAAAELGWTPDRS-------TMPQMIADAWRW 319 >gi|37719581|gb|AAR01886.1| putative GDP-mannoheptose-4,6 dehydratase [Campylobacter jejuni] Length = 344 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 149/321 (46%), Gaps = 29/321 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + V+ + + N+ L + I++ + S D+ D Sbjct: 6 LITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ + D Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKEGYD 125 Query: 122 KKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y I Sbjct: 126 PVVHI----CSSSEVYGKAKVGVKLNEETAFHGASPYSISKIGTDYLGKFYGEAYNIRTF 181 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHVRALY 234 ++ + GP F E + I +IE + V G+ +VR + D +RA Y Sbjct: 182 VTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGNLSSVRTFQDCRDAIRAYY 240 Query: 235 LV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIED-- 286 L+ +KG I GE +NI G F++ ++D L+ S + +R +ED Sbjct: 241 LLSLESEKGNIPCGEAFNIAGEE-------AFKLPEVIDILLNFSDMGGGIEVRQVEDRM 293 Query: 287 RPGHDRRYAIDSSKIKSEIGW 307 RP D+SKIKS I W Sbjct: 294 RPIDADYQMFDNSKIKSFIDW 314 >gi|331697764|ref|YP_004334003.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] gi|326952453|gb|AEA26150.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] Length = 319 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 159/332 (47%), Gaps = 47/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +L+ + +V+V+D L+ G+ +++ + ++ F++ D+ Sbjct: 1 MKLLVTGGAGYVGSVCAAHLL-EAGNEVVVLDDLS-TGHRDAVPDGAR-----FVEGDLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E L E D +V+FAA S V S+ + + N++ + LLE R + Sbjct: 54 --EAAGDVLAEGF-DGVVHFAARSLVGESVQRPEIYWDGNVVKSLRLLEAIRTHGTP--- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG ++ ED P P++PY A+K + D+++ ++ +G+ Sbjct: 108 ------RLVFSSTAATYGEPEQVPIREDSPTRPTNPYGASKLAIDHMISSYAAAHGLAAT 161 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ YG H E LIP+ + ++ G+ V ++G DG VRD+++ Sbjct: 162 SLRYFNVAGAHGRYGERHTVETHLIPI-VLQVAAGARESVQMFGDDWDTPDGTCVRDYIH 220 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V+D A L + G+ YN+G + F + +++A ++ + + Sbjct: 221 VDDLADAHLRALDRAEPGQHAIYNLG-------VGEGFSVREVVEAC--RTVTGHPIPAV 271 Query: 284 IEDRPGHDRRYAIDSS-KIKSEIGWFPQENME 314 + R D I SS + ++E+GW P ++ Sbjct: 272 VAPRRAGDPAVLIASSERARAELGWSPSRTLQ 303 >gi|294674073|ref|YP_003574689.1| GDP-mannose 4,6-dehydratase [Prevotella ruminicola 23] gi|294474129|gb|ADE83518.1| GDP-mannose 4,6-dehydratase [Prevotella ruminicola 23] Length = 363 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 48/342 (14%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS L +L+ N +I+ L +D+ ++++ Sbjct: 7 LITGITGQDGSYLAEFLIEKGYEVHGLMRRSSSFNTARIEHLYLDEW--------VRDMK 58 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 ++ L + D+ D + + + +P I N AA+SHV S + T+ G L Sbjct: 59 KARLVNLHWADMTDSSSLIRVISKIRPTEIYNLAAQSHVKVSFDVPEYTADTDANGVLRL 118 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ + L+ D R Q ST E+YG + + SE P+ P SPY+ K ++ Sbjct: 119 LEAVRI--AGLA----DTCRIYQASTSELYGKVQEVPQSETTPFYPRSPYAVAKLYGFWI 172 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + + +Y + +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 173 MKNYRESYNMFCCNGILFNHESERRGE-TFVTRKITLAAARIAQGYQDKLYLGNLNSLRD 231 Query: 223 WLYVEDHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 W Y +D++ ++L+L++ GE + + ++ E+ + D + K Y Sbjct: 232 WGYAKDYIECMWLILQQPEPDDFVIATGEYHTVREFATLAFKEVGIELEWRGDGVDEKGY 291 Query: 276 SHTELIRFIEDRPGHDRRYAIDS-----SKIKSEIGWFPQEN 312 +E P + R +D +K K+++GW PQ+ Sbjct: 292 DKATGKALVEVDPKYFRPAEVDQLLGNPAKAKAKLGWNPQKT 333 >gi|22761086|dbj|BAC11448.1| unnamed protein product [Homo sapiens] gi|119622153|gb|EAX01748.1| UDP-glucuronate decarboxylase 1, isoform CRA_b [Homo sapiens] Length = 425 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 95 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 152 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 153 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 195 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 196 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 255 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 256 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 314 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 315 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 366 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 367 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 396 >gi|42516563|ref|NP_079352.2| UDP-glucuronic acid decarboxylase 1 [Homo sapiens] gi|74730150|sp|Q8NBZ7|UXS1_HUMAN RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UGD; Short=UXS-1 gi|22761003|dbj|BAC11415.1| unnamed protein product [Homo sapiens] gi|24061784|gb|AAN39844.1| UDP-glucuronic acid decarboxylase [Homo sapiens] gi|37182205|gb|AAQ88905.1| UXS1 [Homo sapiens] gi|39645184|gb|AAH09819.2| UDP-glucuronate decarboxylase 1 [Homo sapiens] gi|119622155|gb|EAX01750.1| UDP-glucuronate decarboxylase 1, isoform CRA_d [Homo sapiens] Length = 420 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|254773493|ref|ZP_05215009.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium avium subsp. avium ATCC 25291] Length = 313 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 28/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 MR +VTG AGFIGS L L+ D V+ +D +G ++L+ + + F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-SGRASNLEHLVGNPAHVFVEADIV 58 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D E I L E +P+ + + AA+ V S+ + N+IGT L E R Sbjct: 59 TADLEAI---LDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAAR------ 109 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ +YG+ E +P +P+SPY+A K + + + + H YG+ Sbjct: 110 ---RTGVRKIVHTSSGGSIYGTPPTYPTPETVPTDPASPYAAGKVAGEIYLNTFRHLYGL 166 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A+ Sbjct: 167 DCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGTNTRDYVFVDDVVDAVV 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G+R+NIG E + L + + + + F R G +R Sbjct: 227 KASGDAGGGQRFNIGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRS 278 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +GW P+ ++ G+ +TV ++ Sbjct: 279 CLDIGLAARVLGWQPKVGLQQGVARTVEYF 308 >gi|118466650|ref|YP_879803.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium avium 104] gi|118167937|gb|ABK68834.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium avium 104] Length = 313 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 28/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 MR +VTG AGFIGS L L+ D V+ +D +G ++L+ + + F++ DI Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-SGRASNLEHLVGNPAHVFVEADIV 58 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D E I L E +P+ + + AA+ V S+ + N+IGT L E R Sbjct: 59 TADLEAI---LDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAAR------ 109 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ +YG+ E +P +P+SPY+A K + + + + H YG+ Sbjct: 110 ---RTGVRKIVHTSSGGSIYGTPPTYPTPETVPTDPASPYAAGKVAGEIYLNTFRHLYGL 166 Query: 178 PVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N YGP P ++ + ++ G ++GDG N RD+++V+D V A Sbjct: 167 DCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTKVFGDGTNTRDYVFVDDVVDAFV 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G+R+NIG E + L + + + + F R G +R Sbjct: 227 KASGDAGGGQRFNIGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRS 278 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D +GW P+ ++ G+ +TV ++ Sbjct: 279 CLDIGLAARVLGWQPKVGLQQGVARTVEYF 308 >gi|24376158|ref|NP_720202.1| NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] gi|24351201|gb|AAN57645.1|AE015900_5 NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] Length = 335 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 150/339 (44%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + + L + +V+ ID L A L L + + F F++ Sbjct: 1 MKYLVTGAAGFIGANVSKRLCA-MGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + +++ AA++ V S+ + +N++G +LE R Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGE---RYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 V K R G VF IG LLD + + ++ +F+ Sbjct: 231 VQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLP 290 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D+ + +G+ Q ++++G+ K V WY Sbjct: 291 MQPGDVHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWY 329 >gi|119622152|gb|EAX01747.1| UDP-glucuronate decarboxylase 1, isoform CRA_a [Homo sapiens] gi|193784129|dbj|BAG53673.1| unnamed protein product [Homo sapiens] Length = 363 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 90 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 91 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 133 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 134 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 193 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 194 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 252 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 253 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 305 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 334 >gi|114797818|ref|YP_761378.1| NAD-dependent epimerase/dehydratase family protein [Hyphomonas neptunium ATCC 15444] gi|114737992|gb|ABI76117.1| NAD-dependent epimerase/dehydratase family protein [Hyphomonas neptunium ATCC 15444] Length = 320 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 144/333 (43%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ + VL +D + G ++ + F ++ D+C Sbjct: 6 RVLITGGAGFIGSFLCERLL-EAGATVLCLDNF-FTGTRMNVAHLMGHPRFELMRHDVCF 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 PLYV-------EVDEIYNMACPASPVHYQFDPVQTTKTSVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + LQ ST EVYG +E+ P P S Y K ++ L + + Sbjct: 107 KRLKAKILQASTSEVYGDPVIHPQTEEYWGNVNPIGPRSCYDEGKRCAETLFFDYHRQHA 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + ++G + LYGDG R + YV+D VR L Sbjct: 167 LRIKVARIFNTYGPRMHPNDGRVVSNFIVQALKGEDITLYGDGSQTRSFCYVDDLVRGLI 226 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ + NIG E F I L + +I + + ++L+ +D P Sbjct: 227 SLMETPDSVTGPINIGNPGE-------FTIRQLAETVIDLTGARSKLVFRPLPQDDP--- 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D +K + + W P + GL+KT+ ++ Sbjct: 277 KQRQPDITKAREILKWEPSVELRDGLSKTIAYF 309 >gi|197102802|ref|NP_001126176.1| UDP-glucuronic acid decarboxylase 1 [Pongo abelii] gi|114579309|ref|XP_525845.2| PREDICTED: hypothetical protein isoform 8 [Pan troglodytes] gi|114579311|ref|XP_001164752.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 isoform 7 [Pan troglodytes] gi|75041529|sp|Q5R885|UXS1_PONAB RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UGD; Short=UXS-1 gi|55730608|emb|CAH92025.1| hypothetical protein [Pongo abelii] Length = 420 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|224499834|ref|ZP_03668183.1| UDP-glucose 4-epimerase [Listeria monocytogenes Finland 1988] gi|254831100|ref|ZP_05235755.1| UDP-glucose 4-epimerase [Listeria monocytogenes 10403S] Length = 327 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELITR-GYEVVVIDNLR-TGHRESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D + S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 EEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYGDGQN------VRDWL 224 V + + G H PE L+P+ + + + + +YGDG N +RD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDGYNTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+RAL LK G +N+G +N F + +L+A ++ + E+ Sbjct: 225 QVEDLIDAHIRALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTGKEI 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 + R D I SS EI GW P Sbjct: 275 PAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|114579317|ref|XP_001164293.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 363 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 90 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 91 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 133 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 134 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 193 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 194 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 252 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 253 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 304 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 305 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 334 >gi|154151309|ref|YP_001404927.1| NAD-dependent epimerase/dehydratase [Candidatus Methanoregula boonei 6A8] gi|153999861|gb|ABS56284.1| NAD-dependent epimerase/dehydratase [Methanoregula boonei 6A8] Length = 352 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 41/352 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL-KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGF+GS L +L N L V+ D L G+ +L + + + F D+ Sbjct: 1 MRVLITGGAGFVGSNLAIFLKNRLPATTVICFDNLKRRGSELNLTRLKVAGI-QFTHGDV 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI-TTNIIGTFILLEETRLWWSC- 117 + E AL F D ++ +AE V + + ++ TN++GT LE R + Sbjct: 60 RNEEDFE-ALPPF--DLMIECSAEPSVLAGVGSSPSYVMNTNLLGTINCLEAVRKNHAAI 116 Query: 118 --LSQDK-------------KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 LS + ++ RF T + G +G+ E P S Y ATK Sbjct: 117 LFLSTSRVYPIRPINALPFREEATRFSLGDTTGIPGVSSRGIAEEFPLAGPRSIYGATKL 176 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF--------LY 214 S+YL+ + +YGI +++ C GP+ + + + + H F Y Sbjct: 177 CSEYLIQEYCASYGIHAIINRCGLIAGPWQMGK--VDQGVVMLWAACHRFRKDLAYIGYY 234 Query: 215 GDGQNVRDWLYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G G+ VRD L+++D + +K+ GE +N GG N I + + A+ Sbjct: 235 GTGKQVRDVLHIDDLCDLVLAQMKRLDEFSGEIFNAGGG---LNNSISLQ---EMTAICR 288 Query: 273 KSYSHTELIRFI-EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + T +R + E RP Y D+S++ GW PQ +++ + W Sbjct: 289 EVTGETIPVRSVPETRPNDLIWYVTDNSRVSRTFGWKPQRSVKDTVTDITRW 340 >gi|118443902|ref|YP_877965.1| NAD-dependent epimerase/dehydratase family protein [Clostridium novyi NT] gi|118134358|gb|ABK61402.1| NAD-dependent epimerase/dehydratase family protein [Clostridium novyi NT] Length = 335 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 27/344 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG + + L+ + + VL +D L+ G L +++E +++N F F+Q DI Sbjct: 1 MNILVTGGAGFIGRWVVKALLKE-QHNVLALDNLS-NGRLENIEEFNENNNFKFIQGDIK 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D + + ++ Q D I + A +V SI + +GTF +LE+ ++ Sbjct: 59 DTKLLDEIFEKQQFDIIYHLGASINVQDSIDDPTTTFYNDTVGTFHILEKAKIQMFGKNA 118 Query: 115 ------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 W ++K + + +ST VY E P P SPY K +++ +V Sbjct: 119 KMDSDSWVIDEKEKTHPCKVVFMSTCMVYDKAKGKGIDEFHPVKPVSPYGGAKIAAENMV 178 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 L++ + Y +P ++ N YGP+ ++ + I + + +YG G RD LY Sbjct: 179 LSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFIKNALNNNDFNIYGTGNQTRDLLY 238 Query: 226 VEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+D R + + + GE N G + I L D +I K ++ I Sbjct: 239 VKDCARFVTMAGFNSNVDGEVVNAGTGRD-------VTINELAD-IISKGRVKINHVKHI 290 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + D SK + +GW P+ +E G+ +T W +N Sbjct: 291 HPQS-EIMKLLCDYSKAEKLMGWKPEYTLEEGIEETEEWIKSSN 333 >gi|298372944|ref|ZP_06982934.1| GDP-mannose 4,6-dehydratase [Bacteroidetes oral taxon 274 str. F0058] gi|298275848|gb|EFI17399.1| GDP-mannose 4,6-dehydratase [Bacteroidetes oral taxon 274 str. F0058] Length = 353 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 60/360 (16%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL---------KEISQSNLFSF 54 ++TG G GS L +L+ +V I + T + N + +++ Q L + Sbjct: 6 LITGITGQDGSYLAEFLLEK-GYEVHGILRRTSSFNTGRIEHLYFEEWVRDMKQQRLINL 64 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D + ++ QPD I N AA+SHV S + T+ +GT LLE R+ Sbjct: 65 HYGDMTDSSSLLRIIQIVQPDEIYNLAAQSHVKVSFDVPEYTAETDAVGTLRLLEAVRI- 123 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L +K+ R Q ST E++G + + E P+ P SPY K ++ + + Sbjct: 124 ---LGMEKR--VRIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYRES 178 Query: 175 YGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDH 229 YG+ +L ++ S G F + I LA R+ G LY G+ +RDW Y +D+ Sbjct: 179 YGMFCVNGILFNHESERRGE-TFVTRKITLAAARIARGYQERLYLGNLDALRDWGYAKDY 237 Query: 230 VRALYLVLKKGR-------IGERYNI------------------GGNNERKNIDIVFEIG 264 V ++L+L+ GE +++ G + K ID+V G Sbjct: 238 VECMWLMLQHPTPEDFVIATGEMHSVREFVTKAFAEAGINIRWEGKGIDEKGIDVV--TG 295 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +L + PK + RP + D +K K+ +GW P + L K + Y Sbjct: 296 KVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPTKTSFDELIKKMVRY 344 >gi|34763098|ref|ZP_00144069.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887232|gb|EAA24332.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 345 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/360 (23%), Positives = 159/360 (44%), Gaps = 56/360 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------------------------KL 34 M +++TGGAGFIGS L + + K +V+V+D K+ Sbjct: 1 MSVLITGGAGFIGSHLVEKFLKE-KHKVIVVDNFDPFYSMDIKILNVLESANKKELREKI 59 Query: 35 TYAGN---LNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSIL 91 G+ LN L + ++S+ + DIC+ E ++ + D ++N AA + V S+L Sbjct: 60 LDLGDDEKLNFLVKYTESDNYKLYVEDICNLENLKEIFIKENIDFVINLAALAGVRPSVL 119 Query: 92 GADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY 151 ++ NI G +LE + + + +Q S+ +YG+ +F+ED+ Sbjct: 120 RPFDYERVNIKGFLNILEICKEFKIN---------KLIQASSSSIYGNSKADIFTEDIRV 170 Query: 152 N-PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 + P SPY+ATK + + + H Y I ++ YG P+ I + ++ Sbjct: 171 DFPISPYAATKKAGEEFGSVYSHLYNIDMIQLRFFTVYGERQRPDLAIHKFVKKIENDEE 230 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLK----KGRIGERYNIGGNNERKNIDIVFEIGFL 266 + +YGDG RD+ Y++D + ++ + + E N+G + + +D+V Sbjct: 231 ITIYGDGNTSRDYTYIKDIIDGIFKSFEYLNNHQNVYEIINLGSSRKINLLDMV------ 284 Query: 267 LDALIPKSYSHTELIRFIEDRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +I + ++FI+ + G D+ +A ID K + + + E G+ V WY Sbjct: 285 --KIIENKLNKKAKLKFIDKQAGDVDKTFACID--KAEKILNYKVSTKFEDGIENFVNWY 340 >gi|73809585|gb|AAZ85711.1| GlcNAc-4-epimerase [Escherichia coli] Length = 341 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 165/338 (48%), Gaps = 28/338 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS---QSNLFSFLQVD 58 ++TG AGFIGS L L+ L V+ +D + + NL+ +KE+ Q + F F++ D Sbjct: 19 LITGVAGFIGSNLLEQLLK-LDQDVVGLDNFSTGHQHNLDLVKELVTPVQWSRFKFIKGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E R+A E Q I++ AA V RSI NI G +L + Sbjct: 78 IRNLEDCRAACCEAQ--YILHQAALGSVPRSIKDPIGTNDNNITGFLNML---------V 126 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +++ RF+ ++ YG+ ED +P SPY+ TK ++ + TYG+ Sbjct: 127 AANEQKVKRFVYAASSSTYGTHPGLPKVEDTIGDPLSPYAVTKYVNELYAGVFSRTYGLE 186 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +GP P +IP + ++ +++ GDG RD+ Y+++ V+A Sbjct: 187 SVGLRYFNVFGPRQDPNGAYAAVIPKWVASILNNEVIYINGDGSTSRDFCYIDNAVQANL 246 Query: 235 LV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGH 290 L L+ + YN+ ++ +++ +++ +++D L+ ++ +++ + R G Sbjct: 247 LAATTLQPDAVNTIYNVAVG-QQTSLNELYK--YIVDELVRYGVEINSNNLKYRDFREGD 303 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + SKIK+++G+ P ++ GL ++ WY N+ Sbjct: 304 VKHSLANISKIKNKLGYEPLFTLKDGLVPSIQWYYSNH 341 >gi|85813787|emb|CAF31840.1| putative NDP-heptose/hexose dehydrogenase [Streptomyces hygroscopicus subsp. hygroscopicus] Length = 319 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 42/325 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+VTGGAG+IGS + R L+++ +V+V+D L+ +G +++ E +Q F++ D+ Sbjct: 1 MRLLVTGGAGYIGSVVARRLLDEGH-RVVVVDDLS-SGFADAVPEGAQ-----FVRGDMA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I + F D +V+ AA S +D S+ + + N + +LL+ + + + Sbjct: 54 VAARILAGPDRF--DGVVHLAARSLIDDSVRRPERYWRGNTQQSLVLLDG--MLAAGVG- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG ++ ED P P++PY A+K + D + + +G+ + Sbjct: 109 ------RIVFSSTAATYGQPERVPIPEDAPTRPTNPYGASKLAVDVALADYARAHGLAAV 162 Query: 181 ------LSNCSNNYGPYHFPEKLIPLAITRMI--EGSHVFLYG------DGQNVRDWLYV 226 ++ +G H PE + G + L G DG VRD+++V Sbjct: 163 SLRYFNVAGAVGRHGERHEPETHLLPLALAAALGRGPELRLNGDDYPTRDGTCVRDFIHV 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L G YN+G ++++ + + +P R Sbjct: 223 ADVADAHLAALSGAVSGTHRIYNLGNGRGFTVLEVLEAVARVTGRRVP--------FRRA 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFP 309 E RPG + +I +E+GW P Sbjct: 275 ERRPGDPATLVASAERILAELGWKP 299 >gi|238795477|ref|ZP_04638992.1| GDP-mannose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] gi|238720596|gb|EEQ12397.1| GDP-mannose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] Length = 372 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 38/352 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + ++TG G GS L +L++ +V I + + N + + I Q +N FL Sbjct: 3 KALITGITGQDGSYLAEFLLSK-GYEVHGIKRRASSFNTSRVDHIYQDRHETNPRFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD I N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDSSNLIRLIKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 ---NELEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRA 232 I N+ P F + I AI + +G H G+ ++RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRAIANIAQGLEHCLYLGNIDSLRDWGHAKDYVRL 235 Query: 233 LYLVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTE 279 +++L++ +I R + + + I++ F + + KS S H+ Sbjct: 236 QWMMLQQDQPEDFVIATGKQITVREFVCMSAKEVGIELEFSGVGINEIATVKSLSGNHSP 295 Query: 280 LIRFIED---------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 ++ + RP D SK K ++GW P+ +E + V Sbjct: 296 FVKVGDIIVRIDPRYFRPAEVETLLGDPSKAKCKLGWVPEITVEEMCAEMVA 347 >gi|50083379|ref|YP_044889.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Acinetobacter sp. ADP1] gi|49529355|emb|CAG67067.1| putative NAD-dependent epimerase/dehydratase (WbpP) [Acinetobacter sp. ADP1] Length = 343 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 35/340 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------QSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ ++L E+ Q N F F++ Sbjct: 19 LITGVAGFIGSNLLETLLK-LDQRVIGLDNFA-TGHQHNLDEVQGLVSREQWNNFKFIRG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWW 115 DIC + ++A + D +++ AA V RS++ + ITTN IG F+ Sbjct: 77 DICQLQDCQAACEGV--DYVLHQAALGSVPRSLV---DPITTNSVNIGGFL--------- 122 Query: 116 SCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + L + Q + F ++ YG ED P SPY+ TK ++ + + Sbjct: 123 NMLVAARDAQVKSFTYAASSSTYGDHPALPKLEDHIGKPLSPYAVTKYVNELYADVFARS 182 Query: 175 YGIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG + N +G P +IP MI+G VF+ GDG+ RD+ ++E+ V Sbjct: 183 YGFYCIGLRYFNVFGQRQDPNGAYAAVIPKWTAAMIQGEDVFINGDGETSRDFCFIENTV 242 Query: 231 RALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 +A L + YN+ +R ++ +F L AL + + + E R Sbjct: 243 QANLLAATTQDAAAKNQVYNV-AVGDRTTLNQLFAT--LQSALAENGIHYNKPAVYREFR 299 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G R D KI +G+ P+ G++K + WY+ + Sbjct: 300 AGDVRHSQADIGKISQLLGYQPEYRFAQGVHKAMHWYVQD 339 >gi|111221477|ref|YP_712271.1| putative nucleotide-sugar dehydratase [Frankia alni ACN14a] gi|111149009|emb|CAJ60690.1| putative nucleotide-sugar dehydratase [Frankia alni ACN14a] Length = 334 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 136/332 (40%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAGF+GS LC L+ +V+ +D G ++ + + F L+ D+ Sbjct: 4 MRVVVAGGAGFLGSHLCERLLAG-GAEVICVDNF-LTGRPENVDPLRALDGFRMLRRDVT 61 Query: 61 DRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + D +V+ A+ S VD L E + GT LLE R Sbjct: 62 GPVDVAGPV-----DTVVHLASPASPVDYRALPL-ETLAVGAWGTRRLLELAR------- 108 Query: 120 QDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF+ ST EVYG +G + P P S Y K ++ L A T Sbjct: 109 ---RKGARFVLASTSEVYGDPQVHPQPEGYWGHVNPVGPRSMYDEAKRFAEALTTAHRAT 165 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G + N YGP + +++P IT+ + G V + GDG R YV+D V Sbjct: 166 HGTRTGIVRIFNTYGPRMRADDGRVVPTFITQALRGRPVTVAGDGSQTRSLCYVDDLVDG 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L +L G N+G E +++ + L +P I F+ P Sbjct: 226 LVRMLDAEHPGP-VNLGSPRELSVLELARLVVGLCGEQVP--------IVFVPRPPDDPS 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + W P ++ GL +TV W+ Sbjct: 277 VRRPDVTLADEVLDWRPAVDLADGLARTVGWF 308 >gi|73538220|ref|YP_298587.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] gi|72121557|gb|AAZ63743.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] Length = 350 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 34/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV +L VL +D Y G+ ++ + F L+ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLV-ELGHDVLCVDNF-YTGSKENISHLLPLYNFELLRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDQIYNLACPASPVHYQSDPVQTTKTSVHGAINM----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG D E P + Y K ++ L + + +G Sbjct: 109 KRVKARILQASTSEVYGDPDNHPQRESYWGHVNPVGRRACYDEGKRCAETLFMDYHRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP P +++ I++ ++G + LYGDG R + +V+D V L Sbjct: 169 VDVRIARIFNTYGPRMHPADGRVVSNFISQALDGEPLTLYGDGSQTRSFCFVDDLVDGLM 228 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ N+G E I EI L A S S E ED P R+ Sbjct: 229 RLMESDAAATPVNLGNPCECTMHAIANEI---LQAT--GSASAIETRPLPEDDP---RQR 280 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D + ++ + W P + GL TV +++ Sbjct: 281 CPDITLARTLLQWNPATTLTEGLRLTVAYFV 311 >gi|323529644|ref|YP_004231796.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001] gi|323386646|gb|ADX58736.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001] Length = 335 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVTQGH-DVLCVDNF-YTGTKDNIAHLLDCPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG ED P P S Y K ++ L + + +G Sbjct: 109 KRVKAKIFQASTSEVYGDALVHPQKEDYWGHVNPIGPRSCYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + + G + LYGDG R + YV+D + A Sbjct: 169 LSIRIARIFNTYGPRMHPADGRVVSNFMMQALRGEPLTLYGDGSQTRSFCYVDDMIDAFI 228 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G +E +I I I S S EL D P H + Sbjct: 229 RLMNTDEDPGGPVNLGNPHEVSMREIAERI-----VAITGSSSPLELHPLPTDDPWHRQ- 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ + +GW P ++ GL +T ++ Sbjct: 283 --PDISRARELLGWQPHTALDDGLEQTARYF 311 >gi|158254768|dbj|BAF83357.1| unnamed protein product [Homo sapiens] Length = 425 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 95 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 152 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 153 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 195 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 196 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 255 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 256 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 314 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 315 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 366 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 367 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 396 >gi|326486447|gb|ADZ76275.1| GDP-mannose 4,6-dehydratase [Campylobacter jejuni subsp. jejuni] Length = 357 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 154/329 (46%), Gaps = 40/329 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKE-ISQSNLFSFLQVDICD 61 ++TG G +GS + +L+ + +V+ + + N+ L + I++ + D+ D Sbjct: 20 LITGFTGQVGSQMADFLLENTDYEVIGMMRWQEPMDNIYHLSDRINKKDRIGIFYADLND 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 ++ + +PD I + AA+S+ S E + TNIIGT +LE R+ Sbjct: 80 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTVNILENIRIL------- 132 Query: 122 KKDQFRFLQI----STDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K++ R+ + S+ EVYG G+ +E+ ++ +SPYS +K +DYL +G Y Sbjct: 133 -KEKNRYDPVVHICSSSEVYGKAKVGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYN 191 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH---VFLYGDGQNVRDWLYVEDHV 230 I ++ + GP F E + I +IE + V G +VR + D + Sbjct: 192 IRTFVTRMGTHSGPRRSDVFFESTVAKQIA-LIEAGYQEPVIKVGSLSSVRTFQDARDAI 250 Query: 231 RALYLV---LKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 RA YL+ +KG + GE +NI G F++ +++ L+ +S + I+ + Sbjct: 251 RAYYLLSLESEKGNVPCGEAFNIAGEE-------AFKLPEVIEILL--GFSTRKDIKVEQ 301 Query: 286 D----RPGHDRRYAIDSSKIKSEIGWFPQ 310 D RP D++KIKS I W P+ Sbjct: 302 DKERLRPIDADYQMFDNTKIKSFIDWKPE 330 >gi|74214650|dbj|BAE31165.1| unnamed protein product [Mus musculus] Length = 420 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVAGIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|315930950|gb|EFV09925.1| UDP-glucuronatedecarboxylase 1 [Campylobacter jejuni subsp. jejuni 327] Length = 318 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 153/335 (45%), Gaps = 42/335 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG GF+GS LC+ L+ + +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 4 ILITGGTGFLGSNLCKRLLGEGN-KIICVDN-NYTGRMENIKELLENENFTFIEHDICEP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I L D I NFA + + G T T++ G +LE Sbjct: 62 LKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAWGH 173 K+ LQ ST EVYG D + ++ Y + + Y K ++ L + Sbjct: 107 -KEHNATILQASTSEVYG--DPLIHPQNEEYRGNVNSIGIRACYDEGKRCAESLFFDYHR 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + + N YG P +++ I + + G + +YGDG R + YV+D + Sbjct: 164 HEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDDLID 223 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + V+ + N G +E F I L +I K+ S +++I +D P Sbjct: 224 IIIKVMNSSKDFQGPINTGNPSE-------FTIKELAQKVIEKTGSKSKII--YKDLPLD 274 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 275 DPTQRRPDISLAKAKFNWEPKINLDEGLEKTIKYF 309 >gi|194323222|ref|ZP_03057006.1| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. novicida FTE] gi|194322586|gb|EDX20066.1| NAD dependent epimerase/dehydratase family protein [Francisella tularensis subsp. novicida FTE] Length = 309 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGS LC L++ +V +D L+ N ++ SN + F++ DI D + Sbjct: 1 MTGGAGFIGSNLCEVLLSK-GYRVRCLDDLSNGHYHNVEPFLTNSN-YEFIKGDIRDLDT 58 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 A + D +++ AA V RSI + N+ GT +LE R + + Sbjct: 59 CMKACEGI--DYVLHQAAWGSVPRSIEMPLVYEDINVKGTLNMLEAAR---------QNN 107 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 +F+ S+ VYG E N SPY+ TK +++ + YG+ Sbjct: 108 VKKFVYASSSSVYGDEPNLPKKEGREGNILSPYAFTKKANEEWARLYTKLYGLDTYGLRY 167 Query: 185 SNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 N +G P +IP I +++ + GDG+ RD+ Y+E+ + A L L Sbjct: 168 FNVFGRRQDPNGAYAAVIPKFIKQLLNDEAPTINGDGKQSRDFTYIENVIEANLKACLAD 227 Query: 240 GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + GE +NI ID+ + L DAL K + F DR G + D Sbjct: 228 SKYAGEAFNIAYGGREYLIDLYYN---LCDALGKKIEPN-----FGPDRAGDIKHSNADI 279 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 SK ++ +G+ P+ + E G+ V WY Sbjct: 280 SKARNMLGYNPEYDFELGIKHAVEWY 305 >gi|148652060|ref|YP_001279153.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1] gi|148571144|gb|ABQ93203.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1] Length = 340 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 41/343 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL---FSFLQVD 58 ++TG AGFIGS L L+ L V+ +D Y NL+ ++ + S FSF++ D Sbjct: 19 LITGVAGFIGSNLLETLLK-LNQTVVGLDNFATGYQKNLDEVQSLVSSEQWKRFSFIKGD 77 Query: 59 I-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEET 111 I C + C D +++ AA V RS+ AD T NI G +L Sbjct: 78 IRNFVDCQKACTGV-------DYVLHQAALGSVPRSL--ADPITTNEVNISGFLNMLTAA 128 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R + F ++ YG ED P SPY+ TK ++ + Sbjct: 129 R---------DAEVKSFTYAASSSTYGDHPGLPKVEDKIGKPLSPYAVTKYVNELYADVF 179 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVE 227 +YG + N +G P+ ++P MI+ VF+ GDG RD+ Y+E Sbjct: 180 ARSYGFKSVGLRYFNVFGRRQDPDGAYAAVVPKWTAAMIKNDTVFINGDGDTSRDFCYIE 239 Query: 228 DHVRALYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + V+A L + YN+ +R ++ +F + AL S+ + + Sbjct: 240 NTVQANILAATTQSNEATNQVYNVAVG-DRTTLNELFNA--IKSALADNGVSYEQEPTYR 296 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + RPG R + SK K+ +G+ P+ N+ G+++ + WY++N Sbjct: 297 DFRPGDVRHSQANVSKAKNLLGYEPKFNISQGIDEAMAWYVNN 339 >gi|221134315|ref|ZP_03560620.1| GDP-mannose 4,6-dehydratase [Glaciecola sp. HTCC2999] Length = 373 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 40/343 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 ++TG G GS L +L+ D +V I + + N + I Q N F D Sbjct: 6 LITGVTGQDGSYLAEFLL-DKGYEVHGIKRRASSLNTERVDHIYQDNHEKNQKFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +K+ QPD + N A+SHV S + + +GT LLE R L Sbjct: 65 LTDSSNLTRIIKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + E P++P SPY+ K + ++V+ + +YG+ Sbjct: 121 GLEKKT--KFYQASTSELYGEVQEIPQRETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ +RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLEKCLYLGNMDALRDWGHAKDYVRMQW 238 Query: 235 LVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLDALI---------PKS 274 ++L++ +I R + + + I++ F G +D + + Sbjct: 239 MMLQQDSADDFVIATGKQISVREFVALSAKEAGIELEF-TGVGIDEIATVKAVTGDNAPA 297 Query: 275 YSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENME 314 + ++I ++ RP D +K K ++GW PQ +E Sbjct: 298 LNVGDIIVKVDPRYFRPAEVETLLGDPTKAKEKLGWVPQITVE 340 >gi|33861757|ref|NP_893318.1| putative CDP-tyvelose-2-epimerase (RfbE) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640125|emb|CAE19660.1| Putative CDP-tyvelose-2-epimerase (RfbE) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 349 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 37/352 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 M++++TGG GF+GS L + + +V +ID L G NL+ LK + Q+ Sbjct: 1 MKILITGGCGFLGSNLSNFFLKK-NYEVFIIDSLVRRGSDINLSWLKNSTNHKNLKNFQI 59 Query: 58 DICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW-- 114 DI ++ + + + P D I + A + + S+ + TN+IGTF +LE R + Sbjct: 60 DIKNKNKLENIFEVNGPFDYICHVAGQVAMTTSLKDPRTDLETNLIGTFNVLEAMRKYSP 119 Query: 115 WSCLSQDKKDQ-------FRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 S L+ ++ + ++ST +G F+E++P + S+PY +K S+D Sbjct: 120 HSLLAYSSTNKVYGDLGWLNYKEMSTRFSVSEYPEG-FNENLPLDFSTPYGCSKGSADQY 178 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVF----------LY 214 V W YG+ ++ S+ YG + K I + IE + Sbjct: 179 VRDWARIYGLKTVVFRHSSIYGGRQYASKDQGWIGWFCKKAIEQKKQQKSNQKLLPFTIS 238 Query: 215 GDGQNVRDWLYVEDHVRALY---LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 G G+ VRD L+ +D V LY K+ GE +NIGG E + I Sbjct: 239 GSGKQVRDVLHADDLVN-LYEKAFFAKEKLNGEIFNIGGGLENSLSLLELFNLLSELLDI 297 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + S+ +L R R + K K ++GW P+ N + G+ + W Sbjct: 298 EQ-LSYNKLPR----RQSDQDFFVASIKKAKIKLGWEPKINYKKGIKDMISW 344 >gi|218779546|ref|YP_002430864.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218760930|gb|ACL03396.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 335 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 162/353 (45%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++TG AGFIG L + L+ + V+ +D L Y L + LK + + F F + Sbjct: 1 MTQLITGAAGFIGFHLSKQLLEQGET-VVGLDNLNDYYDPQLKTDRLKILRDYDNFVFEK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ DRE + + +++ + + N AA++ V S+ ++ +N++G +LE R Sbjct: 60 GEMADREFMPALFEKYGFEKVTNLAAQAGVRYSLKNPHSYVDSNLVGFTNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 K + F S+ VYG+ + DMP+ +P S Y+A+K +++ + Sbjct: 116 ---HTKVEHLVF--ASSSSVYGA------NTDMPFSVHQNVDHPVSLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ H YG+PV YGP+ P+ + L ++EG + ++ +G RD+ Y++D Sbjct: 165 AYSHLYGLPVTGLRFFTVYGPWGRPDMALFLFTKAILEGKPINVFNNGDMQRDFTYIDDI 224 Query: 230 VRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALI 271 ++ + VL + YNIG N K + ++ I + +AL Sbjct: 225 IQGVAKVLDNIPDPDPDWSGDDPDPATSYTPYRLYNIGNN---KPVKLLKFIELIEEALG 281 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+ + L D P YA D + + G++P+ +E G+ + WY Sbjct: 282 MKAEKNM-LPMQAGDVPA---TYA-DIDDLARDAGYWPRTLVEDGVRNFINWY 329 >gi|27377493|ref|NP_769022.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] gi|27350637|dbj|BAC47647.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] Length = 339 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 140/345 (40%), Gaps = 41/345 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQVD 58 +IVTG AGFIG +C L+ + QV+ ID LT A L + FSF ++D Sbjct: 7 VIVTGAAGFIGMHVCERLLARGE-QVVGIDALTPYYDPALKRARLATLEHRPGFSFHEID 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + E PD +V+ AA+ V SI I N G +LE R Sbjct: 66 LADFAAVTRVFDEVSPDRVVHLAAQPGVRASIDDPITSIRANCDGFVTVLEAGR------ 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG+ +S + N P S Y+A+K +++ + + H + + Sbjct: 120 ---RHGVAHLVYASSSSVYGANRTLPYSTEHSVNHPVSLYAASKKANELMAHTYAHVHKL 176 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV YGP+ P+ L + + ++ +G RD+ YV+D V + L Sbjct: 177 PVTGLRFFTVYGPWGRPDMAAWLFTRAIFANEPIKIFNNGDMWRDFTYVDDIVEGVIRTL 236 Query: 238 KKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + YNIG N I+ V L+ +I K Sbjct: 237 DRPATPNPAWNAEAPENSTSYAPYRVYNIGNNRSVNLIEFVET----LEKIIGKP----A 288 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + + G D S ++ ++G+ P + GL + V WY Sbjct: 289 IRKLLPMQAGDVLETRADISALQRDVGFAPSTPLAEGLGRFVEWY 333 >gi|332686111|ref|YP_004455885.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] gi|332370120|dbj|BAK21076.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] Length = 329 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ +V+VID NL + + ++ F Q DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLITK-GYEVIVID------NLQTGHREAVNDQAIFYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E ++S K+ + I++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLKSVFKKENIEGIIHFAANSLVGESVEKPLMYFNNNVYGMQILLEVMQEFGV---- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 KK F ST YG + E P NP++PY +K + ++ YG+ Sbjct: 110 -KKIVFS----STAATYGEPKETPIKETTPTNPTNPYGESKLMMEKMMKWCDGAYGMHFV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 V + + + G H PE LIP+ + ++ G+ L YG DG VRD+ Sbjct: 165 ALRYFNVAGAKKNASIGEDHHPETHLIPI-VLQVASGTRDVLNIYGNDYPTIDGTCVRDY 223 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +Y+ED + A L L+ G + +N+G N +I+ + IP Sbjct: 224 VYIEDLIAAHILALEYLENGGKSDVFNLGSNTGYSVKEILEAAREVTKKEIPA------- 276 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + R G S K K +GW P+ Sbjct: 277 -KIVARRSGDPSTLVASSEKAKQILGWQPK 305 >gi|298491509|ref|YP_003721686.1| GDP-mannose 4,6-dehydratase ['Nostoc azollae' 0708] gi|298233427|gb|ADI64563.1| GDP-mannose 4,6-dehydratase ['Nostoc azollae' 0708] Length = 359 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 21/323 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 R ++TG G GS L +L+ +V I + T N + + I + + +++ Sbjct: 6 RALITGITGQDGSYLSEFLLEQ-GYEVHGIIRRTSTFNTDRIDHIYEDPHKAGVKLLLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E +P I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVKPTEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q Q RF Q + E+YG + SE P+ P SPY+ K + + + + +Y Sbjct: 123 --QQRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYN 180 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + VL ++ S G F + I A+ R++ G +Y G+ RDW Y +D+V+ Sbjct: 181 LFACNGVLFNHESPRRGE-TFVTRKITRAVARIVAGKQKSIYMGNLDAKRDWGYAKDYVK 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++L+L+K + Y I E +++ + F L + Y + R++ RP Sbjct: 240 AMWLMLQKDEPDD-YVI-ATGETRSVREFLALAFGYVNLNWEDYVEFDQ-RYL--RPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENME 314 D +K + ++GW P E Sbjct: 295 DLLIGDPTKAQQQLGWKPSVTFE 317 >gi|256843537|ref|ZP_05549025.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] gi|256614957|gb|EEU20158.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] Length = 330 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 146/331 (44%), Gaps = 45/331 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P +P +PY TK + ++AW GI Sbjct: 106 DAGVKYLVFS-SSAATYGIPKKLPITEDTPLDPINPYGETKMMMEK-IMAWADKADGIKC 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V + G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGAASDGTIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK + + +N+G N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMETNKSDVFNLGTAQGYSNLEILNAAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 R G DS+K ++ +GW P+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKH 306 >gi|226228112|ref|YP_002762218.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas aurantiaca T-27] gi|226091303|dbj|BAH39748.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas aurantiaca T-27] Length = 336 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 45/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQV 57 +++VTG AGFIG L+ V+ +D + Y L L +++ F ++ Sbjct: 3 KILVTGAAGFIGYNTSERLLARGD-AVVGLDNVNDYYDPTLKEARLARLARHPGFRLARL 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 ++ DRE + +E + D +++ AA++ V SI +I +N++G +LE C Sbjct: 62 ELGDREGVERLFREERFDRVIHLAAQAGVRYSITNPHTYIDSNLVGFLHILE------GC 115 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ FS + P S Y+ATK +++ + + H YG Sbjct: 116 RHHGVQ---HLTYASSSSVYGANTAMPFSVHQNIDHPVSLYAATKKANELMAHTYSHLYG 172 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + L ++EG + ++ G+ RD+ Y++D V +V Sbjct: 173 LPTTGLRFFTVYGPWGRPDMAMFLFTKAILEGKPIDVFNHGKMQRDFTYIDDIVEG--VV 230 Query: 237 LKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + YNIG NN ++++ I L AL Sbjct: 231 RTSDHVAAPNPDWNSDRPDPATSKAPYRIYNIGNNNP---VELMHLIATLEQAL-----G 282 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T + +PG D + ++G+ P+ ++E+G+ V WY D Sbjct: 283 RTAEKNMLPIQPGDVPATYADVEALVQDVGFAPRTSIETGVANFVAWYRD 332 >gi|269837798|ref|YP_003320026.1| UDP-glucose 4-epimerase [Sphaerobacter thermophilus DSM 20745] gi|269787061|gb|ACZ39204.1| UDP-glucose 4-epimerase [Sphaerobacter thermophilus DSM 20745] Length = 326 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 98/359 (27%), Positives = 153/359 (42%), Gaps = 52/359 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+V GGAGFIGS + L+ +V V D L G+ ++ + + F+ D+ Sbjct: 1 MDLLVIGGAGFIGSVVAGQLLAAGH-RVTVYDSLVN-GHRAAIPDGAD-----FVHGDVL 53 Query: 61 DRECI-RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + R+ + F D + +FAA S V S+ + TNI GT ++E R Sbjct: 54 DLDALTRTLSRGF--DGVFHFAALSLVGESVAEPGRYFRTNIGGTVNVVEAMR------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + ST VYG D E P P SPY A+K + D + YG+ Sbjct: 105 --ATGVNRLVFSSTAAVYGIPDCVPIPETAPVRPISPYGASKLAVDTFLGFAAEAYGLGA 162 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 + ++ + +G H PE LIPLA+ + H+ ++G DG +RD+L+ Sbjct: 163 VSLRYFNVAGAWDRFGEDHRPETHLIPLALQVALGRRPHLAVFGNDYPTPDGTCIRDYLH 222 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 VED A L L G YN+G +++ + IP E R Sbjct: 223 VEDLGVAHQLALAAAEPGTHRIYNLGNGAGFSVREVIETARRVTGHPIPT----VEAPRR 278 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 D P S +I+ E+GW P++ ++E+ + + W W Y + PD Sbjct: 279 AGDPP----VLVASSERIREELGWQPRKPDLET--------IIADAWAWMQAYPQGYPD 325 >gi|224531943|ref|ZP_03672575.1| hypothetical protein BVAVS116_0445 [Borrelia valaisiana VS116] gi|224511408|gb|EEF81814.1| hypothetical protein BVAVS116_0445 [Borrelia valaisiana VS116] Length = 353 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/362 (23%), Positives = 160/362 (44%), Gaps = 54/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYA----GNLN 41 M++ +TG AGFIG + + LV +LK + ++ L + N Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGVDILNDYYELKFKHERLEALGFCYKDIKTHN 60 Query: 42 SLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +K +NL SF+ DI +++ + KE + + + AA++ + S+ D +++ NI Sbjct: 61 IIKSEKYNNL-SFVYFDILNKDKLLELFKEHKFTHVCHLAAQAGIRDSLENPDSYVSINI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSAT 160 +G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+ Sbjct: 120 VGFFNVLDVCRVY-------KENIKHFVYASTSSVYGINENIPSSEDSITDHPLNLYAAS 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ ++ IP YG Y P+ + L + G + ++ +G Sbjct: 173 KKSNEMIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFADGIKNGKSINIFNNGNMA 232 Query: 221 RDWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFE 262 RD+ YV D +Y VLK + YNIG + K +D + E Sbjct: 233 RDFTYVSDIANGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFIRE 292 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + D K+Y + +E D K+K+++G+ + +++ G+ + Sbjct: 293 LESNFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKISIKEGIKEFSE 344 Query: 323 WY 324 WY Sbjct: 345 WY 346 >gi|158336741|ref|YP_001517915.1| NDP-sugar dehydratase /epimerase [Acaryochloris marina MBIC11017] gi|158306982|gb|ABW28599.1| NDP-sugar dehydratase or epimerase/NAD binding domain 4, putative [Acaryochloris marina MBIC11017] Length = 310 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 146/324 (45%), Gaps = 36/324 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGSAL LV V VID L++ L IS + F DI D Sbjct: 3 RVLVTGGAGFIGSALLPELVAS-NYDVYVIDNLSFGK--RELLNISDDH---FFLSDILD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + S +K QP +++ AA + E NI GT +L+ R CL Sbjct: 57 RKNLNSIIKNIQPHWVIHLAAIHFIPYCNQNPFEASNINIQGTMNILDALR-SLDCLE-- 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + L ST VY + + + +E + +P Y +K + ++L+ + IP ++ Sbjct: 114 -----KVLFASTAAVYPNTNHPI-AETVSSSPLDIYGLSKLAGEHLLNEFYLMTKIPSII 167 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 N +G LIP +++ G G+ RD+++ D +AL L+L++ Sbjct: 168 CRFFNAFGARETNPHLIPEIHRQIMNGKRSIQLGNLDPKRDFIHTADMSQALRLLLEQFS 227 Query: 242 IG-ERYNIGGNNERKNIDIV--FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY---- 294 + +NIG E ++V FE+ E I+ IE P R+ Sbjct: 228 TDIDTFNIGSGQEYSVQEVVEAFELAI------------NEKIQ-IEVDPARIRKVERQH 274 Query: 295 -AIDSSKIKSEIGWFPQENMESGL 317 D SK+K IGW P+ +++SG+ Sbjct: 275 LCADISKLKEYIGWKPRVDLKSGI 298 >gi|325279060|ref|YP_004251602.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] gi|324310869|gb|ADY31422.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] Length = 341 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID-------------KLTYAG-NLNSLKEI 46 M++++TG AGFIG L + L I ID +L G +L+ ++ Sbjct: 1 MQVLITGSAGFIGYHLAKALARQ-GIATYGIDSINSYYDVSLKKARLKACGIDLSRQEQE 59 Query: 47 SQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 +S L+ +F Q+D+CD+ + + D ++N AA++ V S+ + +I +N+ G Sbjct: 60 YRSTLYPNYTFRQMDLCDKPALDALFASRTFDTVINLAAQAGVRYSLEHPETYIDSNVSG 119 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKA 162 +LE R R + S+ VYG+ + F ED + P S Y+ATK Sbjct: 120 FLHILEGCR---------HHHIPRLIFASSSSVYGNSTEVPFREDARADHPVSIYAATKK 170 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVR 221 S++ + + YG+ + YGP+ P+ + P+ R ++E + ++ +G+ R Sbjct: 171 SNELMAYTYSRLYGLQTVGLRFFTVYGPWGRPD-MAPMLFGRSILEDKPIRIFNEGRLSR 229 Query: 222 DWLYVEDHVRALYLVL-KKGRIGER--------YNIGGNNERKNIDIVFEIGFLLDALIP 272 D+ Y++D + + +L G + E YNIG + + +D + L+ Sbjct: 230 DFTYIDDIIAGIVTILDHPGLVREDVPGVPAVIYNIGHGSPVQLMDFI--------GLLE 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + T F+ +PG + D++K+ ++ + ++ G+ + W+ Sbjct: 282 QHLGKTARKEFVGMQPGDVYQTWADTTKLHTDYNYRATTSLGKGIEQFALWF 333 >gi|313892069|ref|ZP_07825667.1| NAD dependent epimerase/dehydratase family protein [Dialister microaerophilus UPII 345-E] gi|313119521|gb|EFR42715.1| NAD dependent epimerase/dehydratase family protein [Dialister microaerophilus UPII 345-E] Length = 306 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 32/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGS L L+ L V +ID L+ N E F++ DI Sbjct: 1 MNILITGGAGFIGSHLADALI-KLNHNVTIIDNLSSGTKFNVPSEAE------FIEADI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I + K + D + + AA++ V SI + NI+G +LE SC Sbjct: 53 RTSSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLE------SCRQT 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ SE+ +P+S Y TK +S+ + + +GI Sbjct: 107 GVK---KIIFSSSAAVYGNNSNLPLSENESLSPTSFYGLTKTTSEKYLNLYFEYFGIHYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP +I + + E + ++GDG RD++ V D V A + Sbjct: 164 ILRYSNVYGPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAI 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGF--LLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 GN + NI E L + +I S LI + + R G R Sbjct: 224 TN----------GNEKILNISTETETTLNELANKMINLSKKDKNLIHYKKPRNGDIYRSC 273 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +E+ W P+ +++ GL +T+ ++ Sbjct: 274 LSNKNAVAELNWKPKISLDKGLIETITYF 302 >gi|307153797|ref|YP_003889181.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306984025|gb|ADN15906.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 342 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 146/331 (44%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + L V+++D L Y G+ + ++++ Q L +Q DI DR Sbjct: 8 ILVTGGAGYIGSHAVQAL-QKAGYSVIILDNLVY-GHRDLVEKVLQVEL---IQGDISDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K + A+++FAA V S+ + N++GT LLE + K Sbjct: 63 ALLDDLFKRYSIAAVMHFAAYIFVGESVTNPAMYYRNNVVGTLTLLEAM-----VAANVK 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K F ST YG +ED P NP +PY TK + ++ + H YG+ + Sbjct: 118 KIVFS----STCATYGVPQFMPLTEDHPQNPINPYGHTKLMVEKILADFDHAYGLKSVCF 173 Query: 182 -------SNCSNNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNVRDWLYV 226 ++ S G H PE + I G + ++G DG +RD+++V Sbjct: 174 RYFNAAGADPSGQLGEDHQPETHLIPLILLAALGQRESISVFGTDYPTPDGTCIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 D HV L +L+ G +N+G N GF + +I + T + I Sbjct: 234 VDLADAHVLGLEYLLEGGE-SNAFNLGNGN-----------GFSVKEVIETARVVTGKPI 281 Query: 282 RFI--EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + E R G S+K K+ +GW PQ Sbjct: 282 KVVECERRAGDPPVLVGSSAKAKTVLGWKPQ 312 >gi|329663221|ref|NP_001192993.1| UDP-glucuronic acid decarboxylase 1 [Bos taurus] gi|297480355|ref|XP_002691390.1| PREDICTED: UDP-glucuronate decarboxylase 1-like [Bos taurus] gi|296482499|gb|DAA24614.1| UDP-glucuronate decarboxylase 1-like [Bos taurus] Length = 420 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILVTGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|55742517|ref|NP_001006849.1| UDP-glucuronic acid decarboxylase 1 [Xenopus (Silurana) tropicalis] gi|82182770|sp|Q6DF08|UXS1_XENTR RecName: Full=UDP-glucuronic acid decarboxylase 1; AltName: Full=UDP-glucuronate decarboxylase 1; Short=UXS-1 gi|49903501|gb|AAH76935.1| UDP-glucuronate decarboxylase 1 [Xenopus (Silurana) tropicalis] Length = 421 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 148 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 149 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 191 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SE+ P P + Y K ++ + A+ G Sbjct: 192 KRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 251 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G+ R + YV D V L Sbjct: 252 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGL- 310 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + + L+ L+ I F+ + +R Sbjct: 311 VALMNSNVSSPVNLGNPQEHS----IVQFARLIKQLVGSGGE----ISFLSEAQDDPQRR 362 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNKT+ ++ Sbjct: 363 KPDIRKAKLLLGWEPVVPLEEGLNKTIHYF 392 >gi|220904053|ref|YP_002479365.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868352|gb|ACL48687.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 318 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG+GF+GS LC L+N+ +VL +D + N +++ + F ++ D+ Sbjct: 6 RILVTGGSGFLGSHLCERLLNEGH-EVLCVDNFFSSARAN-VEDFLDNRRFELIRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T + G + L Sbjct: 62 -----TFPLYVEVDEIYNLACPASPIHYQHDPVQTIKTCVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R Q ST EVYG + +ED P S Y K ++ L ++ G Sbjct: 107 KRLKARIYQASTSEVYGDPEIHPQTEDYWGHVNPNGIRSCYDEGKRCAEALFFSYWRQGG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 +P+ + N YGP P +++ I + ++G + +YGDG R + YV+D + + Sbjct: 167 LPIKVGRIFNTYGPKMHPNDGRVVSNFIIQALKGQPITIYGDGSQTRSFCYVDDLIECMV 226 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 ++ + IG N+G E F I L + ++ + S + +I + E PG D Sbjct: 227 RFMASPEDFIGP-MNMGNPGE-------FTIRELAEKVVDMTGSKS-VISY-EPLPGDDP 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D + + ++GW PQ +E GL KT+ ++ Sbjct: 277 KQRRPDITLAREKLGWEPQVKLEDGLKKTIAYF 309 >gi|157415665|ref|YP_001482921.1| hypothetical protein C8J_1346 [Campylobacter jejuni subsp. jejuni 81116] gi|157386629|gb|ABV52944.1| hypothetical protein C8J_1346 [Campylobacter jejuni subsp. jejuni 81116] Length = 347 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 153/335 (45%), Gaps = 42/335 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG GF+GS LC+ L+ + +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 33 ILITGGTGFLGSNLCKRLLGEGN-KIICVDN-NYTGRMENIKELLENENFTFIEHDICEP 90 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I L D I NFA + + G T T++ G +LE Sbjct: 91 LKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 135 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAWGH 173 K+ LQ ST EVYG D + ++ Y + + Y K ++ L + Sbjct: 136 -KEHNATILQASTSEVYG--DPLIHPQNEEYRGNVNSIGIRACYDEGKRCAESLFFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + + N YG P +++ I + + G + +YGDG R + YV+D + Sbjct: 193 HEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDDLID 252 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + V+ + N G +E F I L +I K+ S +++I +D P Sbjct: 253 IIIKVMNSSKDFQGPINTGNPSE-------FTIKELAQKVIEKTGSKSKII--YKDLPLD 303 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + D S K++ W P+ N++ GL KT+ ++ Sbjct: 304 DPTQRRPDISLAKAKFNWEPKINLDEGLEKTIKYF 338 >gi|253701211|ref|YP_003022400.1| GDP-mannose 4,6-dehydratase [Geobacter sp. M21] gi|251776061|gb|ACT18642.1| GDP-mannose 4,6-dehydratase [Geobacter sp. M21] Length = 372 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 38/357 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + I+TG G GS L L+ +V I + + N + I Q F Sbjct: 3 KAIITGITGQDGSYLAELLLEK-GYEVHGIKRRASSFNTQRVDHIYQDPHIKDAHFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD + N A+SHV S + + T+ +GT +LE RL Sbjct: 62 GDLTDSSNLTRIMQEVQPDEVYNLGAQSHVAVSFESPEYTVETDGVGTLRILEAVRL--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L DKK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 119 -LGLDKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + +G LY G+ ++RDW + +D+V+ Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEQCLYMGNIDSLRDWGHAKDYVKM 235 Query: 233 LYLVLKKGR-------IGERYNIG----------GNNERKNIDIVFEIGFLLDALIPKSY 275 +L+L++ + G +Y + G + D V EI ++ K+ Sbjct: 236 QWLMLQQDKPEDFVIATGVQYTVRQFIIWTAAELGVTLQFEGDGVDEIATVISVEGTKAP 295 Query: 276 SHT--ELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +++ I+ RP D +K K ++GWFP+ ++ + V L+ Sbjct: 296 ALKVGDIVVRIDPRYFRPSEVETLLGDPTKAKQKLGWFPETTVQEMCAEMVAHDLEE 352 >gi|114579313|ref|XP_001164635.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes] gi|114579315|ref|XP_001164675.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes] Length = 381 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 51 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 108 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 109 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 151 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 152 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 211 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 212 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 270 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 271 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 322 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 323 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 352 >gi|220927823|ref|YP_002504732.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] gi|219998151|gb|ACL74752.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] Length = 337 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 158/363 (43%), Gaps = 65/363 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M+++VTGGAG+IG+ C L+ + +V+V+D L + + +++I+ + F +VD Sbjct: 1 MKVLVTGGAGYIGTHTCVELL-EAGFEVIVVDNLCNSKETAIERVEKITGKKI-KFYKVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+E + QPD++++FA V S+ ++ NI GT IL C Sbjct: 59 ILDKEALEQVFINNQPDSVIHFAGLKAVGESVSIPLKYYHNNITGTLIL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK--------------ASS 164 +K + S+ VYG SE+ P + ++PY TK AS Sbjct: 110 LMEKYGVKNLVFSSSATVYGDPASVPISEEFPLSVTNPYGRTKLMIEEILKDLHVADASW 169 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG----- 215 + +L + + G ++ S G P P L+P IT++ G V ++G Sbjct: 170 NIALLRYFNPIG-----AHESGTIGEDPNGIPNNLVPY-ITQVAVGKLKEVNVFGNDYDT 223 Query: 216 -DGQNVRDWLYVED----HVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDA 269 DG VRD+++V D H++AL L IG R YN+G N + ++ Sbjct: 224 VDGTGVRDYIHVVDLAKGHIKALEK-LTNEHIGIREYNLGTGNGYSVLQVIKAFSEACGK 282 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 IP + RPG + KSE+GW E GL++ ++W Sbjct: 283 EIP--------YKITGRRPGDIAECYAKPDRAKSELGW----TAEKGLSEMCV----DSW 326 Query: 330 WWR 332 W+ Sbjct: 327 RWQ 329 >gi|86609640|ref|YP_478402.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558182|gb|ABD03139.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 334 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 61/366 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MRL+VTGGAG+IGS C+ L + + D L Y G+ +++ + L++ D+ Sbjct: 1 MRLLVTGGAGYIGSHTCKALAASGHLPI-TYDNLVY-GHPWAVR-------WGPLEIGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR+ + ++ ++P+ +++FAA ++V S+ ++ N+ G+ LLE R Sbjct: 52 ADRQRLDQVIQHYRPEGVIHFAAYAYVGESVKDPGKYYRNNVAGSLSLLEAMR------- 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + ST YG ++ E P P +PY +K + ++ + +GI Sbjct: 105 -DHGIPYIVFS-STCATYGVPERIPIPESHPQRPINPYGQSKLMVEQILQDFQVAHGIRS 162 Query: 180 LL--------SNCSNNYGPYHFPE-KLIPLAITRMIEGS---HVFLYG------DGQNVR 221 + ++ G H PE LIPL + + G H+ ++G DG +R Sbjct: 163 ISLRYFNAAGADPDGEIGEAHDPETHLIPLVLE--VAGGQRLHITVFGDDYDTPDGTCIR 220 Query: 222 DWLYVEDHVRALYL---VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D+++V D +A L L GR I YN+G +++ + IP Sbjct: 221 DYIHVTDLAQAHVLAIEALASGRPIQPAYNLGNGRGFSVKEVIATAAAVTGKRIP----- 275 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW---RPL 334 ++ RPG R D+ I ++ W P L + + W W RP Sbjct: 276 ---VQMGARRPGDPPRLVGDAGAIFRDLNWKP-------LYTDLAEIIQTAWRWHQKRPY 325 Query: 335 YKELKP 340 + + +P Sbjct: 326 FGKSRP 331 >gi|1197652|gb|AAC60773.1| Gmd [Yersinia enterocolitica (type O:8)] Length = 372 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 40/353 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV 57 + ++TG G GS L +L+ QV I + + + N + + I Q N FL Sbjct: 3 KALITGITGQDGSYLAEFLLEK-GYQVHGIKRRSSSFNTSRIDHIYQDPHEVNPHFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD I N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLIRLVKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAVRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 ---NGLEHKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPV---LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + +L N + P F + I AI + G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRPQTFVTRKITRAIANIALGLEDCLYLGNMDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKKGRIGERYNIGGNNE---------------------RKNIDIVFEIGFLLDALI 271 +++L++ + E + I + K ID + I + D Sbjct: 236 QWMMLQQDQ-PEDFVIATGKQITVREFVRMSAKEAGIEIEFSGKGIDEIATISAISDEYA 294 Query: 272 PKSYSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + ++R RP D SK K ++GW P+ +E + V Sbjct: 295 TSAKVGDIIVRVDPRYFRPAEVETLLGDPSKAKKKLGWVPEITVEEMCAEMVA 347 >gi|300865164|ref|ZP_07109988.1| putative sugar dehydratase/epimerase yfnG [Oscillatoria sp. PCC 6506] gi|300336854|emb|CBN55138.1| putative sugar dehydratase/epimerase yfnG [Oscillatoria sp. PCC 6506] Length = 333 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 25/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + VTG G +GS L LV ++ LV D + ++ L + ++ + D Sbjct: 10 VFVTGCTGLLGSWLVADLVKRGARVTGLVRDLVPHS----RLYMEDWHQRINIVRGCVED 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + A+ E++ D + + AA++ V + TNI GT+ +LE R Sbjct: 66 LPALERAINEYEIDTVFHLAAQTIVGVANREPLATFETNIKGTWNVLEACR--------K 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+D+ YG + + E+ P PY +K+ +D + + +YG+PV + Sbjct: 118 VGGVSRIVVASSDKAYGDQEILPYDENTPLQGEHPYDVSKSCADLICRTYYVSYGLPVCI 177 Query: 182 SNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 + C N YG +++P I + V + DG +RD+ Y +D V A L+L + Sbjct: 178 TRCGNFYGGGDLNFNRIVPDTIRSALRDKPVVIRSDGSFIRDYFYAKDGVLAYLHLAEQM 237 Query: 240 GRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 R GE +N + +++V +I L+D SH E I + + +Y + Sbjct: 238 DRREIWGEAFNFSNEVQITVVEMVRKILELMDK------SHLEPIILNQAKNEIIHQY-L 290 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + K + + W P+ +++ L T+ WY D Sbjct: 291 SAEKARRLLNWKPEYSLDGSLKDTIQWYSD 320 >gi|149173451|ref|ZP_01852081.1| hypothetical protein PM8797T_21943 [Planctomyces maris DSM 8797] gi|148847633|gb|EDL61966.1| hypothetical protein PM8797T_21943 [Planctomyces maris DSM 8797] Length = 324 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 30/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L L+ D +V V D L+ G L++L+ I F+Q D+ D Sbjct: 5 LVTGGAGFIGSHLATRLIKDGH-RVRVFDNLS-TGALHNLEHIKDD--VEFVQGDLRDLA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A + + + AA + V RS+ + + GT +L+ R + Sbjct: 61 AVEQATAGVE--IVFHQAALASVPRSVEHPLDTHEACVTGTVHVLDAAR---------RS 109 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R + + YG+ ++ E SPY+A K + + A+ ++Y + + Sbjct: 110 GVQRVVYAGSSSAYGNQEQMPKHEGQTPEVLSPYAAAKLAGELYCQAFANSYDLETVRIR 169 Query: 184 CSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 N +GP P +IPL + ++EG ++GDG RD+ +V++ V+A L + Sbjct: 170 YFNVFGPRQDPNSPYSAVIPLFTSALLEGRRPMIFGDGLQSRDFTFVDNVVQANILASQA 229 Query: 240 GR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G YN + ID++ I LD K Y F R G + Sbjct: 230 PADKVSGNVYNAACGSSLNLIDLLKFICNQLD----KPYDPD----FQPARTGDVKHSWA 281 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + ++G+ P +E GL KT+ WY Sbjct: 282 DISAAQRDLGYEPVVEIEEGLRKTIDWY 309 >gi|163749802|ref|ZP_02157048.1| GDP-mannose 4,6-dehydratase [Shewanella benthica KT99] gi|161330615|gb|EDQ01573.1| GDP-mannose 4,6-dehydratase [Shewanella benthica KT99] Length = 375 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 156/350 (44%), Gaps = 38/350 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV-D 58 ++TG G GS L +L+ + +V I + + + N + I Q N FL D Sbjct: 8 LITGITGQDGSYLAEFLL-EKGYEVHGIKRRSSSLNTERVDHIYQDSHEDNQRFFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +KE QPD + N A+SHV S + + +GT LLE R L Sbjct: 67 LTDSSNLTRIIKEVQPDEVYNLGAQSHVAVSFECPEYTADVDALGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + SE P++P SPY+ K + ++V+ + +YG+ Sbjct: 123 GLEKKT--KFYQASTSELYGDVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ +RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANISQGLQDCLYLGNMDALRDWGHAKDYVRMQW 240 Query: 235 LVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT----- 278 ++L++ +I R + + + I++ F L + KS + Sbjct: 241 MMLQQDVADDFVIATGKQISVREFVSLSAKEVGIELEFTGQGLNEIATIKSITGDNAPAS 300 Query: 279 ---ELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 ++I ++ RP D +K K ++GW PQ +E ++ V Sbjct: 301 KVGDVIVKVDPRYFRPAEVETLLGDPTKAKEKLGWVPQITVEEMCSEMVA 350 >gi|154151307|ref|YP_001404925.1| NAD-dependent epimerase/dehydratase [Candidatus Methanoregula boonei 6A8] gi|153999859|gb|ABS56282.1| NAD-dependent epimerase/dehydratase [Methanoregula boonei 6A8] Length = 336 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 35/337 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS +C +L+ D V +D +G ++ + + F F++ DI Sbjct: 25 RVLVTGGAGFLGSWMCEFLI-DSGASVTCVDNFA-SGRKENIHALMANERFRFIEHDIS- 81 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RS E D + + A+ + E + N G I LE Sbjct: 82 ----RSLPVETPVDYVFHMASRASPFEFERYPIEILRANTQGVMIALEIA---------- 127 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 KK RF+ ST EVYG+ D E P Y K + V+A+ + Sbjct: 128 KKHNARFVFTSTSEVYGNPDIVPTPETYHGNVNPVGLRGCYDEAKRCGEAYVIAYRREHR 187 Query: 177 IPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + ++ N YGP + ++IP I + + G + ++GDG R + YV D + Sbjct: 188 LNTRIARIFNTYGPRIRMDGIYGRVIPRFIDQALTGKPITVFGDGSQTRSFTYVTDQIEG 247 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L G+ NIG NE V E+ + AL S S ED P Sbjct: 248 LLRLAALDDAEGQVINIGNVNE----ITVLELARKVIALT-GSKSALTFHPLPEDDPLRR 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R D +K K + W P+ +E GL + + W +N Sbjct: 303 RP---DVTKAKKILDWQPKVPLEKGLGRMIEWIKPHN 336 >gi|254168408|ref|ZP_04875253.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] gi|197622689|gb|EDY35259.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] Length = 313 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 30/329 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGS + L+ + + +VLV D L+ +G + +KE F F+Q D+ D E Sbjct: 1 MTGGAGFIGSHIVDALMEE-EHEVLVYDNLS-SGKMEFIKEHMGKENFKFVQADLLDFEK 58 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 ++ ++ + + + AA V + N+I T+ +LE RL D KD Sbjct: 59 LKEEMEGVE--LVYHVAANPDVRLGASDTHVHLEQNVIATYNVLEAMRL------NDVKD 110 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + ST VYG ++ E P P S Y A+K ++ + ++ HT+G+ ++ Sbjct: 111 ---IIFTSTSTVYGEANEIPTPEGYGPLIPISLYGASKLGAEAFITSYAHTFGMSAVIYR 167 Query: 184 CSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLK-KGR 241 +N GP +I I ++ H + GDG + +LYV+D V A+ K + R Sbjct: 168 FANIVGP-RSTHGVIYDFIMKLKRNMHELEILGDGTQTKSYLYVKDCVDAIIFGYKNRKR 226 Query: 242 IGERYNIGGN---NERKNIDIVFEIGFLLDALIPKSYSHTELIR-FIEDRPGHDRRYAID 297 E +NIG N RK DI+ E L D Y T R + D P + + Sbjct: 227 DVEIFNIGSEDWINVRKIADIIVEEMGLQDV----KYKFTGGKRGWKGDVP----KMLLS 278 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 KIKS GW P+ N E + T L+ Sbjct: 279 IEKIKS-YGWKPKYNSEESVRLTARHLLN 306 >gi|150020063|ref|YP_001305417.1| NAD-dependent epimerase/dehydratase [Thermosipho melanesiensis BI429] gi|149792584|gb|ABR30032.1| NAD-dependent epimerase/dehydratase [Thermosipho melanesiensis BI429] Length = 310 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 44/339 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS + LV + +V+V+D NL+ K+ + + + DI Sbjct: 1 MKTLVTGGAGFIGSHVVDKLVQN-GFEVVVLD------NLSKGKKENVNEKAKLIVGDIK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + + D + + AA++ V S+ E NIIG+ L+ + Sbjct: 54 DKKAMEELFENENFDYVFHLAAQASVSVSVKDPVEDANVNIIGSLNLINLSI-------- 105 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K +F+ ST +YG D ++ E + P SPY K S + + + + Sbjct: 106 -KHGVKKFIFSSTGGAIYGD-DVEIYPTPESVCPKPISPYGIAKLSVENYLRFAKREFNL 163 Query: 178 PVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + +N YGP P +I + I+RM+ G + + GDG VRD++YVED A Sbjct: 164 DYTVLRYANVYGPRQDPFGEAGVIAIFISRMLNGDDIVINGDGGYVRDYVYVEDVANANL 223 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED------RP 288 LK G G NI G + +++ +F G+L ++IR+ ++ R Sbjct: 224 RALKSGS-GLEINI-GTSVGTSVNQLF--GYL-----------KKIIRYDKEPIYGPPRK 268 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G R+ + ++ E+ W P ++E GL TV W+ N Sbjct: 269 GDIRKSILCYTRALEELRWKPTVDIEKGLRLTVEWFKRN 307 >gi|28172995|gb|AAO32665.1|AF499932_7 nucleotide sugar epimerase [Vibrio vulnificus] gi|3093975|gb|AAC18831.1| nucleotide sugar epimerase [Vibrio vulnificus] Length = 334 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 151/347 (43%), Gaps = 42/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSN-LFSFLQV 57 M+ +VTG AGFIGSA L N +V+ ID L Y NL + N LF F+ V Sbjct: 1 MKYLVTGAAGFIGSATAEKL-NAAGHEVVGIDNLNDYYDVNLKHARLARIENPLFKFVSV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + D +++ AA++ V S+ + +N++G +LE R Sbjct: 60 DISDRGAMEQLFATEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q+K + S+ VYG K FS D +P S Y+ TK S++ + ++ H Y Sbjct: 115 --QNKVSHLVYA--SSSSVYGLNAKVPFSTSDSVDHPVSLYAPTKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I +G + + +G RD+ +V+D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILDGDAIDINNNGDMWRDFTHVDDIVEGVVR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D V I L K+ Sbjct: 230 IADVIPTRNESWTVEAGTPATSSAPYSVYNIGHGSPINLMDFVKAIENELGIEAKKN--- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E +PG + D+ + + G+ P+ ++ G+ + V WY Sbjct: 287 -----FREMQPGDVYQTYADTEDLFTATGYKPRVTVKEGVAEFVSWY 328 >gi|329120909|ref|ZP_08249541.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965] gi|327471368|gb|EGF16819.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965] Length = 306 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 32/329 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAGFIGS L L+ L V +ID L+ N E F++ DI Sbjct: 1 MNILITGGAGFIGSHLADALI-KLNHNVTIIDNLSSGTKFNVPSEAE------FIEADI- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I + K + D + + AA++ V SI + NI+G +LE SC Sbjct: 53 RTSSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLE------SCRQT 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ SE+ +P+S Y TK +S+ + + +GI Sbjct: 107 GVK---KIIFSSSAAVYGNNSNLPLSENESLSPTSFYGLTKTTSEKYLNLYYEYFGIHYT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP +I + + E + ++GDG RD++ V D V A + Sbjct: 164 ILRYSNVYGPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAI 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGF--LLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 GN + NI E L + +I S LI + + R G R Sbjct: 224 TN----------GNEKILNISTETETTLNELANKMINLSKKDKNLIHYKKPRNGDIYRSC 273 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +E+ W P+ +++ GL +T+ ++ Sbjct: 274 LSNKNAVAELNWKPKISLDKGLIETITYF 302 >gi|330816483|ref|YP_004360188.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] gi|327368876|gb|AEA60232.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] Length = 384 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 161/391 (41%), Gaps = 77/391 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS------- 53 M++++TGGAGFIGS L R LV V V+D L A ++ S L Sbjct: 1 MKILITGGAGFIGSHLARKLVAQ-NATVTVLDNL--AQQIHGADPYQDSALLRSLGGSVR 57 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 ++ +CDR + A++ DAIV+ AAE+ +S+ ++ N+ G ++L+ Sbjct: 58 MIEGSVCDRATLERAMR--GQDAIVHLAAETGTGQSMYEVGHYVDVNVGGCGLILD---- 111 Query: 114 WWSCLSQDKKDQFRFLQI-STDEVYGS--------------------LDKGLFS------ 146 L +++ + R + + S+ +YG L G F Sbjct: 112 ---ILVKNRNNTVRKMVVASSRAIYGEGKYRSPALGIVYPDARSEADLLAGRFDYLCPVS 168 Query: 147 ----------EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK 196 E+ +PSS Y TK + +V+ + GI N YGP Sbjct: 169 GEPLQCLPTDEESKIHPSSVYGITKYDQELMVMTVCRSIGIGACALRYQNVYGPGQSLSN 228 Query: 197 ----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI-GERYNIGGN 251 ++ + TR+ G+ + ++ DG RD++Y++D V A L + G + IG Sbjct: 229 PYTGILSIFSTRIKNGNEINVFEDGLESRDFVYIDDVVDATEAALMRPEASGRVFGIGSG 288 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 I++ +G L + +P + + R G R D ++ + +G+ P+ Sbjct: 289 QRTAVIEVAERLGALYRSAVPINVTGAF-------RLGDIRHNYADLTRAREWLGFEPKV 341 Query: 312 NMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 + E G+ + W + +E+KPDN Sbjct: 342 SFEQGIARFAAWVEE---------QEVKPDN 363 >gi|319646980|ref|ZP_08001208.1| YtcB protein [Bacillus sp. BT1B_CT2] gi|317391039|gb|EFV71838.1| YtcB protein [Bacillus sp. BT1B_CT2] Length = 372 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 138/330 (41%), Gaps = 37/330 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + +TGGAGFIGS+L L+ + V D L Y K LQ DI Sbjct: 12 IFITGGAGFIGSSLIGKLIERNSVTVYDNFSRDSLRY-------KPYRDHPHLKVLQGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++ A++ IV+ A + +D I + + N+IG+ LLE C Sbjct: 65 LDLNALKKAIQ--GASHIVHAAGIAGIDTVIQNPVKTMQVNMIGSANLLESAAGLTECK- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKASSDYLVLAWG 172 R + ST EV+G + + + + Y+ +K + +++ A+ Sbjct: 122 -------RVVCFSTSEVFGQI--AFRARETSHTVLGAVGEARWTYAVSKLAEEHMAYAYF 172 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+P + N YGP E I + R + ++++GDG +R W YV+D + Sbjct: 173 KELGLPTVTVRPFNVYGPEQVGEGAIKTMVHRALLDEPIYIHGDGTQIRAWCYVDDMIDG 232 Query: 233 LYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + L K +GE +NIG NER I + + L + I + I F E + Sbjct: 233 ILRCLTMKEAVGESFNIG--NERTVITV-----YGLASTIIRVLGSKSQIFFGEKKEADI 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +K K +G+ + ++E G+ +T Sbjct: 286 ELRIPQVNKAKEMLGFSAKVDLEEGIRRTA 315 >gi|17231001|ref|NP_487549.1| nucleotide sugar epimerase [Nostoc sp. PCC 7120] gi|17132642|dbj|BAB75208.1| nucleotide sugar epimerase [Nostoc sp. PCC 7120] Length = 316 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNLF---SFLQV 57 ++IVTG AGFI S L L+ + +V+ ID++ Y L K I+ F +F++ Sbjct: 3 KIIVTGAAGFIASHLVETLLKQGE-EVIGIDEVNDYYDPLLKRKNIAHLQSFPNFTFIEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILLEETRLWWS 116 DI + S L++ + + AA++ V S G + NI T +LLE Sbjct: 62 DIQFLDW-PSLLQDV--TVVYHQAAQAGVRASWGNGFRAYTERNINATQVLLEA------ 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++D + R + ST VYG + E +P P SPY TK +++ L + +G Sbjct: 113 --AKDAQQLTRLVFASTSSVYGDAETLPTHEGIPPQPVSPYGITKLAAERLCGLYHKNFG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P + YGP P+ +++ + +YGDGQ RD+ +V D V A Sbjct: 171 VPFVALRYFTVYGPRQRPDMAFHKFFKSVLQDEAIPVYGDGQQTRDFTFVSDAVAANLAA 230 Query: 237 LK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +GE +NIGG + +++ + ++ I +++ IE G R A Sbjct: 231 ASVPAAVGEIFNIGGGSRVVLAEVLDTMEQIVGQPIKRNH--------IEKAMGDARHTA 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 D SK + +G+ P+ ++ GL+ W Sbjct: 283 ADVSKARKILGYEPKVSLREGLSLEWQW 310 >gi|332710323|ref|ZP_08430271.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] gi|332350872|gb|EGJ30464.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] Length = 356 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 98/355 (27%), Positives = 154/355 (43%), Gaps = 54/355 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVID---KLTYAG-------NLNSLKEISQSNL 51 +L+VTG +G IGS +C Y Q+ ID + + G N L+E Q Sbjct: 3 KLLVTGSSGLIGSEVCGYFAQQ-GWQIHGIDNNQRAVFFGSQGDTRWNQQRLQETIQD-- 59 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F + DI DR+ I + + +PDAIV+ AA+ DR+ TN +GT LLE Sbjct: 60 FVHHEFDIRDRKGILDLMAQLKPDAIVHTAAQPSHDRAAAIPFADFDTNAVGTLNLLEAA 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYG---------SLDKGLFSEDMPYNPSSP------ 156 R SC + F+ +ST++VYG LD ED Y P Sbjct: 120 R--QSC------PESPFVHMSTNKVYGDRPNTIKLKELDTRWDYEDRVYTNGIPESFSID 171 Query: 157 ------YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIE 207 + A+K ++D +V +G + +P GP H +L + + +E Sbjct: 172 QSKHSLFGASKVAADVIVQEYGRYFNLPTACLRGGCLTGPNHSGVELHGFLSYLVKCNLE 231 Query: 208 GSHVFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 G ++G G+ VRD ++ D R ++ ++ RI E YNIGG + N + E L Sbjct: 232 GREYKIFGYKGKQVRDNIHSLDVSRFIHAFIEAPRIAEVYNIGGG--KGNSCSILEAFKL 289 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + K+ +T L E+R G Y D SK++ +P ++ L +T+ Sbjct: 290 AEKYSGKAMHYTYL---QENRIGDHICYYSDLSKMREH---YPSWDISVSLEETI 338 >gi|217975412|ref|YP_002360163.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS223] gi|217500547|gb|ACK48740.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS223] Length = 335 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L L +V+ ID L Y NL L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCL-LGHEVIGIDNLNDYYDVNLKLARLDLLQTLDNFHFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGIAALFARHAFQRVIHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKK------------GRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V K G +NIG + + +D I L DAL K+ + Sbjct: 231 VQAKPPRPNTDWTVEAGTPATSSAPYRVFNIGNGSPVQLLDF---ITALEDALGIKANKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D+S + +G+ P ++ +G+ + V WY Sbjct: 288 -----FLPMQPGDVHSTWADTSDLFDAVGYKPLMDINTGVAQFVDWY 329 >gi|327382992|gb|AEA54468.1| NAD-dependent epimerase/dehydratase [Lactobacillus casei LC2W] Length = 316 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 31/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDR 62 +VTGGAGFIGS L L+ D K V ++D L+ L+E I S+ +F + I D Sbjct: 10 LVTGGAGFIGSNLTELLLTDPKNTVTIVDDLSMG-----LRENIPDSDRVTFYEHSITDH 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + + D IV AA + V S+ T ++ +E L S L + Sbjct: 65 DFMSRLLIDGKFDYIVLLAAIASVADSV--------ERPYATHLVNQEANL--SMLETLR 114 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q RF ++ S+ VYG +E M P + Y+ K +++ VL +G Y +PV Sbjct: 115 THQIRFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P+ ++ M++ +GDG+ RD++YV D VRA+ Sbjct: 175 VCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRG 234 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ + N ++ +++ ++ L+ L K+ T + E R G R Sbjct: 235 LLETPSARDDVFNVANGQQTSLN---QVAKELEKLTGKTLHAT----YQEPRLGDIRDSY 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVC 322 K+ + + P + GL K V Sbjct: 288 AQVDKL-DQFDFMPHTPLAEGLAKYVA 313 >gi|191638944|ref|YP_001988110.1| UDP-glucose 4-epimerase [Lactobacillus casei BL23] gi|190713246|emb|CAQ67252.1| UDP-glucose 4-epimerase [Lactobacillus casei BL23] gi|327386180|gb|AEA57654.1| NAD-dependent epimerase/dehydratase [Lactobacillus casei BD-II] Length = 311 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 31/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDR 62 +VTGGAGFIGS L L+ D K V ++D L+ L+E I S+ +F + I D Sbjct: 5 LVTGGAGFIGSNLTELLLTDPKNTVTIVDDLSMG-----LRENIPDSDRVTFYEHSITDH 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + + D IV AA + V S+ T ++ +E L S L + Sbjct: 60 DFMSRLLIDGKFDYIVLLAAIASVADSV--------ERPYATHLVNQEANL--SMLETLR 109 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q RF ++ S+ VYG +E M P + Y+ K +++ VL +G Y +PV Sbjct: 110 THQIRFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P+ ++ M++ +GDG+ RD++YV D VRA+ Sbjct: 170 VCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRG 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ + N ++ +++ ++ L+ L K+ T + E R G R Sbjct: 230 LLETPSARDDVFNVANGQQTSLN---QVAKELEKLTGKTLHAT----YQEPRLGDIRDSY 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVC 322 K+ + + P + GL K V Sbjct: 283 AQVDKL-DQFDFMPHTPLAEGLAKYVA 308 >gi|91203036|emb|CAJ72675.1| similar to dTDP-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 313 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 35/334 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGGAGFIGS LC Y + +VL ID L G+ +++ + +N F F++ ++ Sbjct: 1 MRTLITGGAGFIGSHLCDYFIEKGH-EVLCIDNL-LTGSPDNISHLIGNNRFRFIKHNVS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +++FA+ + + + + +GT + L Sbjct: 59 DYIYVDGRI-----DNVLHFASPASPFDYLNYPIQTLKVGSLGTL----------NSLGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST E YG ED P P Y K ++ + +A+ + Sbjct: 104 AKAKGARFLLASTSETYGDPQVHPQREDYWGHVNPVGPRGVYDEAKRFAEAMTMAYHRYH 163 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + N YGP + + +P + + I G + +YG+G R + ++ D V + Sbjct: 164 NMDTKIVRIFNTYGPKMRIKDGRALPNFMCQAIRGEDITVYGNGSQTRSFCFISDLVEGI 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 Y +L I G N NI EI L A + S ++++ ++ P D + Sbjct: 224 YRLL----------ISGENNPVNIGNPEEITILQLAEMILSLTNSKSKIVFKELPVDDPK 273 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK S + W P+ + + GL KT+ ++ D Sbjct: 274 VRQPDISKAMSLLHWEPRVSRDIGLQKTLKYFQD 307 >gi|229014864|ref|ZP_04171961.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides DSM 2048] gi|229170305|ref|ZP_04297983.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH621] gi|228613166|gb|EEK70313.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH621] gi|228746445|gb|EEL96351.1| DTDP-glucose 4,6-dehydratase [Bacillus mycoides DSM 2048] Length = 300 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 24/304 (7%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N ++ + NL +Q DI D++ + K D + AA Sbjct: 4 KHEVWILDNLANSTTANIIEFVHDLNLKQCIQGDIKDKKLVDQLFKNHSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYG-SLDKG 143 +V SI A + IGTF LLE+ K + + +ST VY + + Sbjct: 64 NVQDSIDDARTTFENDTIGTFNLLEQCH----------KHNVKMVFMSTCMVYDKATNTQ 113 Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPL 200 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ ++ + Sbjct: 114 GISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGVVAI 173 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIV 260 I ++ V +YGDG+ RD LYVED V+K G Y+ N N Sbjct: 174 FINNKLDKIPVNIYGDGKQTRDLLYVED---CADFVVKAG-----YSSKANGHIINAGTG 225 Query: 261 FEIGF-LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 +I L LI + + + I + ++ + K K+ + W P+ ++E G+ K Sbjct: 226 QDISINKLAELISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKVSLEDGVIK 284 Query: 320 TVCW 323 T W Sbjct: 285 TEEW 288 >gi|158423885|ref|YP_001525177.1| UDP-glucuronate 5'-epimerase [Azorhizobium caulinodans ORS 571] gi|158330774|dbj|BAF88259.1| UDP-glucuronate 5'-epimerase [Azorhizobium caulinodans ORS 571] Length = 335 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 39/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 MR +VTG AGFIG L + L+ + V V Y + E+ + N FS + Sbjct: 1 MRFLVTGTAGFIGFHLAKRLLAGGHVVVGVDGLTPYYDVRLKHSRHAELERHNGFSAVIG 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I + + A QPD I++ AA++ V S+ ++ N+ G++ +LE Sbjct: 61 MIETPDVLAQAADLAQPDVIIHLAAQAGVRYSLENPKAYVDANLNGSWNVLE-------- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L++ K + L ST VYG+ K F E D P + Y+ATK S + + ++ H YG Sbjct: 113 LARHLKPR-HLLLASTSSVYGANAKVPFCETDRADEPMTLYAATKKSMEAMAHSYAHLYG 171 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + ++ +++G + +YG+G+ RD+ +++D V A+ + Sbjct: 172 VPTTAFRFFTVYGPWGRPDMALFKFVSAILKGEPIDIYGEGRMSRDFTFIDDLVEAVLRL 231 Query: 237 LKK--------GRIG----------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++ GR G NI G +D V + ++ Sbjct: 232 VERAPQTGAPVGRAGVDSLSPVAPFRVVNIAGGQPVGLLDFV--------ETVEQAVGRP 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + G R ++ +++ G+ P + G+ V WY Sbjct: 284 AIRNLLPMQAGDVPRTYASAALLEALTGYRPDTPLGVGVPAFVEWY 329 >gi|167648780|ref|YP_001686443.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] gi|167351210|gb|ABZ73945.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] Length = 324 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 147/335 (43%), Gaps = 30/335 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +IVTGGAGFIG + L+ + + L D A + FS +++DI Sbjct: 5 VIVTGGAGFIGMHVAERLLERGETVIGVDLFNDYYDPALKAARAARLEDRPGFSMVRMDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++ IV+ AA++ V SI + +N+ G +LE R Sbjct: 65 ADHVAFAELVRTVGAKRIVHLAAQAGVRYSIDNPFAYQHSNLAGHLSVLEAAR------- 117 Query: 120 QDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG LD F E P + P S Y+ATK +++ + +++ YG Sbjct: 118 --HNQVSHLVYASSSSVYGDRPLDGAGFKETDPVDAPVSLYAATKRANELMSISYAKLYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P+ YGP+ P+ +++ G + +YG+G+ RD+ Y++D V + V Sbjct: 176 FPMSGLRFFTVYGPWGRPDMAYYGFTQKILGGEPIEVYGEGRMARDFTYIDDIVDGVVGV 235 Query: 237 L-----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G E YNIG N+ I ++ I L AL T+++R ++ PG Sbjct: 236 LDNPPPPAGH--EIYNIGDNDP---IGLMEMITTLETAL---GRQATKILRPMQ--PGDV 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D SK+ + G+ P+ + GL + W+ D Sbjct: 286 TATFADISKLNALTGYKPRVGLAQGLERFAAWWRD 320 >gi|39996914|ref|NP_952865.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|39983802|gb|AAR35192.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|298505927|gb|ADI84650.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter sulfurreducens KN400] Length = 311 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 150/334 (44%), Gaps = 40/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+ VL +D + G+ ++ + + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGH-DVLCLDNF-FTGSKRNIDRLMDFHRFEVIRHDI- 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I L E D I N A + + I T+++GT + L Sbjct: 58 ----IEPILLEV--DRIYNLACPASPVHYQYNPVKTIKTSVMGTI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG D + + Y NP S Y K ++ L++ + Sbjct: 102 AKRVRARILQASTSEVYG--DPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHR 159 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + ++ N YGP +++ + + + G + +YGDG R + YV+D + Sbjct: 160 QNGVDIRIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLD 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ + N+G E I+ I I + S +++I P D Sbjct: 220 GLVTLMEHDQFCGPVNLGNPEETPIIEFARRI-------IAMTGSSSQII--YRPLPSDD 270 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + ++ +GW P+ +++ GL KT+ ++ Sbjct: 271 PRQRQPDITLARTILGWEPRVSLDEGLAKTIEYF 304 >gi|307748306|gb|ADN91576.1| UDP-glucuronic acid decarboxylase 1 [Campylobacter jejuni subsp. jejuni M1] Length = 318 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 46/337 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG+GF+GS LC+ L+ + +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 4 ILITGGSGFLGSNLCKRLLGEGN-KIICVDN-NYTGKMKNIKELLENENFTFIEHDICEP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I L + I NFA + + G T T++ G +LE Sbjct: 62 LKITQKLNQ-----IYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ LQ ST EVYG D + ++ Y NP + Y K ++ L + Sbjct: 107 -KEHNATILQASTSEVYG--DPLIHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFDYHR 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + + N YG P +++ I + + G + +YGDG R + YV+D + Sbjct: 164 HEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDDLID 223 Query: 232 ALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + V+ + N G E F I L +I K+ S +++I +D P Sbjct: 224 IIIKVMNSSKDFQGPINTGNPGE-------FTIKELAQKIIEKTGSKSKII--YKDLPLD 274 Query: 291 D---RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D RR D S K++ W P+ N++ GL KT+ ++ Sbjct: 275 DPIQRRP--DISLAKAKFDWEPKINLDEGLEKTIKYF 309 >gi|119485401|ref|ZP_01619729.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] gi|119457157|gb|EAW38283.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] Length = 332 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 56/353 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L +V+++D L Y G+ + ++++ + L + D DR Sbjct: 8 VLVTGGAGYIGSHAVLALQRS-GYEVVILDNLVY-GHRDVVEQVLKVEL---IVGDTNDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + + DA+++FAA ++V S+ D++ N++GT LLE + Sbjct: 63 QLLDNLFSMRKIDAVMHFAAYAYVGESVSAPDKYYRNNVVGTLTLLEAMK---------D 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL-- 180 +F+ ST YG + ED P NP +PY TK + ++ + H Y + Sbjct: 114 ASINKFVFSSTCATYGIPQQVPIPEDHPQNPINPYGMTKLMVEKILSDFDHAYDFKSVWF 173 Query: 181 ------LSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ + G H PE LIPL + + + + ++G DG VRD+++V Sbjct: 174 RYFNAAGADPDGSLGEDHQPETHLIPLTLMAALGKRESLSIFGTDYPTPDGTCVRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--EL 280 D HV L ++K G+ + +N+G N GF + +I + T ++ Sbjct: 234 TDLATAHVLGLEYLIKGGKT-DVFNLGNGN-----------GFSVKEVIETARQVTGRDI 281 Query: 281 IRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I D RPG K + +GW PQ S LN + + W W Sbjct: 282 IAVECDRRPGDPPALVGSGEKARQILGWNPQ---YSDLNTIIS----HAWQWH 327 >gi|125595984|gb|EAZ35764.1| hypothetical protein OsJ_20054 [Oryza sativa Japonica Group] Length = 285 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 26/278 (9%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 6 ADLSDSSSLRRALDYILPDEVYNLAAQSHVAVSFEVPDYTADVTATGALRLLEAVRL--- 62 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q + E++GS SE P++P SPY+A K ++ + + + YG Sbjct: 63 -----ASKRIRYYQAGSSEMFGSTPPPQ-SESSPFHPRSPYAAAKVAAHWYTVNYREAYG 116 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + VL ++ S G +F + I A+ R+ G + VFL G+ RDW + D+V Sbjct: 117 LFACNGVLFNHESPRRGE-NFVTRKITRAVGRIKVGLQTKVFL-GNLSAARDWGFAGDYV 174 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++ +L++ + G+ + E ++ + F L K + + F RP Sbjct: 175 EAMWRMLQQDKPGD--YVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDKKYF---RPAE 229 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D++K + E+GW P+ G + V +DN+ Sbjct: 230 VDSLQGDATKARKELGWKPK----VGFQQLVEMMVDND 263 >gi|229065646|ref|ZP_04200875.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH603] gi|228715619|gb|EEL67414.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus AH603] Length = 300 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 30/307 (9%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N ++ + NL +Q DI D++ + K D + AA Sbjct: 4 KHEVWILDNLANSTTANIIEFVHDLNLKQCIQGDIKDKKLVDQLFKNHSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYG-SLDKG 143 +V SI A + IGTF LLE+ K + + +ST VY + + Sbjct: 64 NVQDSIDDARTTFENDTIGTFNLLEQCH----------KHNVKMVFMSTCMVYDKATNTQ 113 Query: 144 LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPL 200 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ ++ + Sbjct: 114 GISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGVVAI 173 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNERKN 256 I ++ V +YGDG+ RD LYVED V+A Y G I G + + Sbjct: 174 FINNKLDKIPVNIYGDGKQTRDLLYVEDCADFVVKAGYSSKANGHIIN----AGTGQDIS 229 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 I+ + E+ L + + + +H I+ + + K K+ + W P+ ++E G Sbjct: 230 INKLAEL-ILGNKVSIQHVTHIHPQSEIQ-------KLLCNYEKAKTILNWEPKVSLEDG 281 Query: 317 LNKTVCW 323 + KT W Sbjct: 282 VIKTEEW 288 >gi|225387306|ref|ZP_03757070.1| hypothetical protein CLOSTASPAR_01058 [Clostridium asparagiforme DSM 15981] gi|225046620|gb|EEG56866.1| hypothetical protein CLOSTASPAR_01058 [Clostridium asparagiforme DSM 15981] Length = 346 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 27/329 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TG G GS L +L+ + V I + N + + +S + + D+ D Sbjct: 3 KALITGITGQDGSFLAEFLLKK-EYDVHGIIRRASISNTARIDHLIESQCVTLHEGDLTD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + QPD I N AA+SHV S + + IG LLE R+ LS+ Sbjct: 62 TSSLIRIIGLVQPDEIYNLAAQSHVQISFDVPEYSGEVDAIGVLRLLEAVRIL--GLSKT 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI---- 177 K Q ST E++G +++ E P++P SPY+ K ++V + YG+ Sbjct: 120 CK----IYQASTSELFGKVEEVPQRETTPFHPYSPYAVAKQYGFWIVKEYRDAYGMFAVN 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLV 236 +L ++ S G +F + I LA+ R+ G LY G+ ++RDW Y +D+V ++L+ Sbjct: 176 GILFNHESERRGE-NFVTRKITLAVARIACGLQEKLYLGNMDSLRDWGYAKDYVECMWLM 234 Query: 237 LKKGR-------IGERYNIGGNNERK----NIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 L++ + GE++ + ER +I++E G +D S S T ++ Sbjct: 235 LQQEKPEDFVIATGEQHTVRDFVERAFKRVGKNIIWE-GSGIDEKGIDSESGTVIVEVDA 293 Query: 286 D--RPGHDRRYAIDSSKIKSEIGWFPQEN 312 RP D +K K+ +GW PQ+ Sbjct: 294 RWFRPTDVDNLWGDPTKAKTVLGWNPQQT 322 >gi|51891919|ref|YP_074610.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] gi|51855608|dbj|BAD39766.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] Length = 292 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 135/327 (41%), Gaps = 44/327 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R +VTG AGFIGS +LV L+ V+ +D+ A + L + + L ++ Sbjct: 3 RFLVTGAAGFIGS----HLVEALRAAGHDVVGVDRRPGADVVGDLLTLDLAPLLDGVEY- 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 +V+ A + V S ++ N+ T LLE R Sbjct: 58 ------------------VVHLAGQPGVRESWSQFPAYLAGNLQTTQRLLESLR------ 93 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + +F+ ST VYG + ED P P SPY TK +++ L +G T GIP Sbjct: 94 ---DRPLKKFVLASTSSVYGEVPMPA-REDGPAMPVSPYGLTKLAAEKLCDLYGRTAGIP 149 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + YGP P+ ++G + +YGDG +RD+ YV D V A Sbjct: 150 WVALRYFTVYGPRQRPDMAFSRWFNAALDGEPIQIYGDGSQLRDFTYVADAVTATQRAAL 209 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 +G N+GG + V E L+ A+ + IR + PG R D+ Sbjct: 210 NPVVGVPINVGGGSA----VTVREAIRLIAAITGRPIR----IRQLPPAPGDMRETRADT 261 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYL 325 ++ E+G+ P +E GL + W+L Sbjct: 262 ERLWREVGFRPSTPLEEGLWQQYRWHL 288 >gi|89097009|ref|ZP_01169900.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] gi|89088389|gb|EAR67499.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] Length = 329 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/354 (24%), Positives = 155/354 (43%), Gaps = 50/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ D + +V+D L G+ ++ ++ F Q DI Sbjct: 1 MSILVLGGAGYIGSHAVYQLI-DQNYEAVVVDSLE-TGHREAVHPDAK-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ D +++FAA S V S+ ++ N+ GT +LLE Sbjct: 54 DKEFLRSVFEKESIDGVLHFAANSLVGESMENPLKYFNNNVYGTQVLLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--------LAWG 172 ++ D + ST YG +E+M NP++ Y TK + + ++ L + Sbjct: 105 NEFDVKNIVFSSTAATYGEQKTMPITEEMSANPTNAYGETKLTMEKIMKWCEAAHDLKYV 164 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE LIP+ + + + H+ ++G DG +RD++ Sbjct: 165 SLRYFNVAGARPTGEIGEDHQPETHLIPIILQVALGQREHISIFGDDYDTEDGTCIRDYI 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +VED + A L L+ G E N+G F + +++A + + H Sbjct: 225 HVEDLIGAHLLALQYLQNGGKSEIINLGSGQG-------FSVKEMIEA-VREVTGHEIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + + R G S K K+ +GW PQ ++ +++ W W + Sbjct: 277 KVVPRRSGDPSTLIASSEKAKTVLGWNPQRT-------SIKQIIEDAWSWHQAH 323 >gi|326486496|gb|ADZ76322.1| nucleotidyl-sugar pyranose mutase [Campylobacter jejuni subsp. jejuni] Length = 318 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 38/333 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGG GF+GS LC+ L+++ +++ +D Y G + ++KE+ ++ F+F++ DIC+ Sbjct: 4 ILITGGTGFLGSNLCKRLLSEGN-KIICVDN-NYTGKMENIKELLENENFTFIKHDICEP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLSQ 120 I L D I NFA + + G T T++ G +LE Sbjct: 62 LKITQKL-----DQIYNFACPAS-PPAYQGKHAIKTTKTSVYGAINMLELA--------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-----PYSATKASSDYLVLAWGHTY 175 K+ LQ ST EVYG +E+ N +S Y K ++ L + Sbjct: 107 -KEHNATILQASTSEVYGDPLVHPQNEEYRGNVNSIGIRACYDEGKRCAESLFFDYHRHE 165 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + + N YG P +++ I + + G + +YGDG R + YV+D + + Sbjct: 166 GVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGSQTRSFCYVDDLIDII 225 Query: 234 YLVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 V+ + N G E F I L +I K+ S +++I +D P D Sbjct: 226 IKVMNSSKDFQGPINTGNPGE-------FTIKELAQKVIEKTGSKSKII--YKDLPLDDP 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S K++ W P+ N++ GL KT+ ++ Sbjct: 277 TQRRPDISLAKAKFNWEPKINLDEGLEKTIKYF 309 >gi|89111290|dbj|BAE80319.1| UDP-galactose 4-epimerase [Acetobacter tropicalis] Length = 328 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 57/334 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAG++GS + L++D V+V D L G+ ++ E + SF+ D+ D Sbjct: 3 RFLVTGGAGYVGSHVVLALLDDGH-DVVVFDSLR-TGHRAAVPEQA-----SFVHGDLAD 55 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +C+ L E D +++FAA S V S+ +++ N F L++ +C+ Sbjct: 56 LDCLNKVLAEGPWDGVLHFAALSLVGESMQDPMLYMSANAGIGFGLID------ACVRHG 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV---LAWGHTYGIP 178 K RF+ ST ++GS SED P +P SPY +K Y+V L W I Sbjct: 110 IK---RFVFSSTVGLFGSAGDAPISEDTPVDPGSPYGESK----YMVERALYWADR--IH 160 Query: 179 VLLSNC-----------SNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQN 219 L S C + G H PE LIPL I ++ L+G DG Sbjct: 161 GLKSACLRYFNAAGADPAGRAGEDHRPETHLIPLVIDAALQRRPALTLFGQDYPTPDGTC 220 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +RD+++V D RA VL + E+ +N+G N +I+ +G + +P Sbjct: 221 IRDYVHVTDLARAHLAVLPL--LNEKSVTFNVGTGRGNSNREIIESVGRVTGLDVPWKAG 278 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + RPG +++ GW P+ Sbjct: 279 --------DRRPGDPPCLVASPARLMEATGWAPE 304 >gi|300021638|ref|YP_003754249.1| GDP-mannose 4,6-dehydratase [Hyphomicrobium denitrificans ATCC 51888] gi|299523459|gb|ADJ21928.1| GDP-mannose 4,6-dehydratase [Hyphomicrobium denitrificans ATCC 51888] Length = 367 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 146/340 (42%), Gaps = 28/340 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 +++G G G+ L R L++ I V I + + + N + EI Q LF D Sbjct: 18 LISGVTGQDGAYLARLLLDKGYI-VHGIKRRSSSFNTQRVDEIYQDPHEDDVLFFMHYGD 76 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + ++ +G LE R+ Sbjct: 77 LTDATNVIRLVQEIQPDEIYNLAAQSHVQVSFETPEYTANSDAVGVLRFLEAIRILKLA- 135 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF Q ST E+YG + + E P+ P SPY K + ++ + + YG+ Sbjct: 136 -----NSVRFYQASTSELYGKVQETPQKESTPFYPRSPYGVAKLYAYWIAVNYREAYGMH 190 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ R+ G LY G+ RDW + +D+V ++ Sbjct: 191 ASNGILFNHESPMRGETFVTRKITRAVARIGAGLQSTLYLGNLDAKRDWGHAKDYVEGMW 250 Query: 235 LVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLL-------DALIPKSYSHTELIRFI 284 +++ + G+ G R+ +++ F EIG + D + + + ELIR Sbjct: 251 KIVQSDQPGDYVLATGETHAVREFVELAFAEIGKTIDWTGAGVDEVGLDTKTGAELIRID 310 Query: 285 ED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 RP D +K ++E+GW + + + V Sbjct: 311 PRYFRPTEVDVLLGDPTKARNELGWHHKTTFSELVKEMVA 350 >gi|56478778|ref|YP_160367.1| WbpP [Aromatoleum aromaticum EbN1] gi|56314821|emb|CAI09466.1| WbpP [Aromatoleum aromaticum EbN1] Length = 343 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 151/342 (44%), Gaps = 43/342 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFL--- 55 +VTG AGFIGS L L+ L +V+ +D +A NL+ ++ + Q F+F+ Sbjct: 19 LVTGVAGFIGSNLLETLLK-LDQRVVGLDNFATGHARNLDEVQTLVTAEQWARFAFVRGD 77 Query: 56 --QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT---TNIIGTFILLEE 110 Q+D C R C D +++ AA V RS+ D+ IT TNI G +L Sbjct: 78 IRQLDDCRRACAGV-------DYVLHQAALGSVPRSL---DDPITSNATNIDGFLNMLVA 127 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R + F ++ YG ED+ P SPY+ TK ++ Sbjct: 128 AR---------DAEVKSFTYAASSSTYGDHPSLPKVEDLIGKPLSPYAVTKYVNELYADV 178 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + YG + N +G P +IP T MI+G VF+ GDG+ RD+ +V Sbjct: 179 FARCYGFNTIGLRYFNVFGKRQDPNGAYAAVIPKWTTAMIQGEDVFINGDGETSRDFCFV 238 Query: 227 EDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ++ V+A L R YN+ + R ++ ++ G+L +AL ++ ++ Sbjct: 239 DNAVQANLLAATTVDDAARDQIYNVAVSG-RTTLNELY--GYLQEALGQNGVNYDRTPKY 295 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + R G R D K +G+ PQ ++ SG+ + WY+ Sbjct: 296 RDFRAGDVRHSQADIDKANRLLGYAPQFDIRSGIQAVMPWYI 337 >gi|293380796|ref|ZP_06626839.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|312978291|ref|ZP_07790034.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] gi|290922639|gb|EFD99598.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|310894810|gb|EFQ43881.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] Length = 330 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 146/331 (44%), Gaps = 45/331 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P +P +PY TK + ++AW GI Sbjct: 106 DAGVKYLVFS-SSAATYGIPKKLPITEDTPLDPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V + G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGAASDGTIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK + + +N+G N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMETNKSDVFNLGTAQGYSNLEILNAAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 R G DS+K ++ +GW P+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKH 306 >gi|256752415|ref|ZP_05493274.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] gi|256748684|gb|EEU61729.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] Length = 311 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 33/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS + L+ + +V +ID + G + +++E ++ D+ + Sbjct: 4 FLITGGAGFIGSNIAEELIKRGE-KVRIIDNFS-TGKMENIEEFKDK--IELIEGDLKNI 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ A++ D I++ AA S V RS+ NI GT LL + + Sbjct: 60 NDVKKAVEGI--DYILHQAALSSVPRSVEDPLSSNANNIDGTLNLL---------VVAKE 108 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ++ YG + SEDM NP SPY+ TK + + + YG+ + Sbjct: 109 AGVKRVVIAASSSAYGDTEILPKSEDMTPNPLSPYAVTKYVEELYGKVFYNIYGLETVSL 168 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP P +IP IT++++G ++GDG+ RD+ Y+++ V A L Sbjct: 169 RYFNVFGPKQDPNSQYAAVIPKFITKILKGESPVIFGDGEQTRDFTYIDNVVEANILAAT 228 Query: 239 KGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG-HDRRYA 295 + GE NI +V +I +L I Y D+P D +++ Sbjct: 229 SKNVGHGEVINIACGERISLNQLVDKINEILGTNIKPLY----------DKPRIGDVKHS 278 Query: 296 IDS-SKIKSEIGWFPQENMESGLNKTVCWY 324 + S K K +G+ E GL KT+ WY Sbjct: 279 LASIEKAKKLLGYRVSIKFEEGLRKTIDWY 308 >gi|168704624|ref|ZP_02736901.1| UDP-glucose 4-epimerase [Gemmata obscuriglobus UQM 2246] Length = 333 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 96/357 (26%), Positives = 158/357 (44%), Gaps = 66/357 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS R L+ +V V D L Y G+ ++ ++ + + ++ Sbjct: 7 MRILVTGGAGYIGSHTVRQLLAGGH-EVTVFDSLEY-GHRRAVPDV------NLVVGNLR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + L + +A+++FAA ++V S+ ++ T N+I + LL+ R Sbjct: 59 DIDHVDNLLVVNRIEAVIHFAAYAYVGESVTSPAKYYTNNLIYSLQLLDRCR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ ST YG D +E P P +PY +K + ++ + + Y Sbjct: 111 -RNGVQKFVFSSTCATYGVPDAVPIAETAPQRPVNPYGNSKLAFEHALADYAAAY----P 165 Query: 181 LSNCSNNY------------GPYHFPE-KLIPLAITRMIEGS--HVFLYG------DGQN 219 C+ Y G H PE LIPL + R G HV ++G DG Sbjct: 166 FGYCALRYFNAAGAAEDGTIGESHDPETHLIPL-VFRAATGKIPHVSVFGTDYPTPDGTC 224 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V+D RA L L K G + YN+G G + R+ I V ++ L +P Sbjct: 225 VRDYIHVDDLARAHILALDKIGPGSKLQYNVGLGRGYSVREVIAAVEQVTGL---KVP-- 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 ++ R G D+ KI E+GW S T+ L+ W W Sbjct: 280 ------VKEEPRRAGDPPALVADAGKIARELGW-------SAKYDTLTAILETAWRW 323 >gi|146281202|ref|YP_001171355.1| epimerase [Pseudomonas stutzeri A1501] gi|145569407|gb|ABP78513.1| probable epimerase [Pseudomonas stutzeri A1501] Length = 309 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 30/283 (10%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAGFIGS L LV I+VL D L+ N + Q + D+ D Sbjct: 6 ILVTGGAGFIGSNLVDALLVRGYAIRVL--DNLSTGKREN----LPQDERVELIVGDVAD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSCL 118 EC+R +++ + A+V+ AA + V S+ LG + +N+IGT L E R Sbjct: 60 AECVRRSVQGCR--AVVHLAAVASVQASVDDPLGTHQ---SNLIGTLNLCEAMR------ 108 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R L S+ VYG+ +G E P +PY+A K +S++ + + +G+ Sbjct: 109 ---EAGVKRVLFASSAAVYGNNGEGQAIDEGTAKAPLTPYAADKLASEHYLDFYRRQHGL 165 Query: 178 PVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++ N YGP P +I + R G + ++GDG+ RD++YV D V L Sbjct: 166 EPVVFRFFNVYGPRQDPSSPYSGVISIFTERAQRGRPIAVFGDGEQTRDFIYVGDLVEVL 225 Query: 234 YLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 L+ E N+G N ++ IG +L L SY Sbjct: 226 VQALEAADAPEGAVNVGLNKATSLNQLLDAIGDVLGDLPEVSY 268 >gi|90407559|ref|ZP_01215741.1| putative nucleotide sugar epimerase [Psychromonas sp. CNPT3] gi|90311369|gb|EAS39472.1| putative nucleotide sugar epimerase [Psychromonas sp. CNPT3] Length = 338 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 154/346 (44%), Gaps = 40/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFI SA+ L L +V+ ID L Y L + E ++ LF+F+++ Sbjct: 1 MKYLVTGAAGFIASAVVERLTA-LGHEVIGIDNLNDYYDVRLKYARLERIKNPLFTFIKM 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR + K + + +++ A++ V SI + +N+IG +LE R + Sbjct: 60 DLADRIALPELFKTQKFERVIHLGAQAGVRYSIENPFAYADSNLIGHLNILEGCRHYKIK 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG ++ FS E +P S Y+ATK +++ + ++ H Y Sbjct: 120 ---------HLIYASSSSVYGLNNEIPFSTEKGADHPVSFYAATKKANELMAHSYSHLYQ 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + ++I G + +Y G RD+ Y++D V + + Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTEKIINGDEIEVYNHGDMWRDFTYIDDIVEGIIRI 230 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 K + YNIG + ++ I L AL K++ Sbjct: 231 QDKAPTQQADWTPENGSPASSSAPYAIYNIGNGEPVRLLEF---IEALERALKMKAHK-- 285 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +F+ + G + DS + +G+ P ++E G+ + V WY Sbjct: 286 ---KFMPMQAGDVYQTFSDSQALFDVLGYKPNTSVEKGIAEFVRWY 328 >gi|257869587|ref|ZP_05649240.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] gi|257803751|gb|EEV32573.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] Length = 329 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ Q +V+D L G+ ++ + F + DI Sbjct: 1 MAILVLGGAGYIGSHAVDQLITK-GYQAVVVDNL-LTGHRQAIHPEA-----VFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ ++S ++ D +++FAA S V S+ ++ N+ G +LLE + Sbjct: 54 DKAFLQSVFEKETIDGLIHFAASSLVGESVEKPLKYFNNNVYGMQVLLE-------VMKD 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + D F ST YG ++ +E+ P NP +PY +K + ++ YG+ Sbjct: 107 NNVDHIVFS--STAATYGEPEQSPITEETPTNPKNPYGESKLMMEKMMRWCDEAYGMKYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+PL + + + + ++G DG +RD++ Sbjct: 165 ALRYFNVAGAKSDASIGEDHDPETHLVPLILQVALGQRQELAIFGDDYDTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +VED H+ AL LKKG +N+G NN + + +LDA ++ + ++ Sbjct: 225 HVEDLCNAHILALEY-LKKGNPSNVFNLGSNNG-------YSVKEMLDAA--RTVTQKDI 274 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFP 309 + R D + SS K K+ +GW P Sbjct: 275 PAKVAPRRAGDPGTLVASSDKAKAVLGWEP 304 >gi|52079238|ref|YP_078029.1| NAD-dependent epimerase/dehydratase [Bacillus licheniformis ATCC 14580] gi|52784603|ref|YP_090432.1| YtcB [Bacillus licheniformis ATCC 14580] gi|52002449|gb|AAU22391.1| NAD-dependent epimerase/dehydratase [Bacillus licheniformis ATCC 14580] gi|52347105|gb|AAU39739.1| YtcB [Bacillus licheniformis ATCC 14580] Length = 324 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 138/329 (41%), Gaps = 37/329 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQV---LVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 + +TGGAGFIGS+L L+ + V D L Y K LQ DI Sbjct: 12 IFITGGAGFIGSSLIGKLIERNSVTVYDNFSRDSLRY-------KPYRDHPHLKVLQGDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++ A++ IV+ A + +D I + + N+IG+ LLE C Sbjct: 65 LDLNALKKAIQ--GASHIVHAAGIAGIDTVIQNPVKTMQVNMIGSANLLEAAAGLTECK- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKASSDYLVLAWG 172 R + ST EV+G + + + + Y+ +K + +++ A+ Sbjct: 122 -------RVVCFSTSEVFGQI--AFRARETSHTVLGAVGEARWTYAVSKLAEEHMAYAYF 172 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+P + N YGP E I + R + ++++GDG +R W YV+D + Sbjct: 173 KELGLPTVTVRPFNVYGPEQVGEGAIKTMVHRALLDEPIYIHGDGTQIRAWCYVDDMIDG 232 Query: 233 LYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + L K IGE +NIG NER I + + L + I + I F E + Sbjct: 233 ILRCLTMKEAIGESFNIG--NERTVITV-----YGLASTIIRVLGSKSQIFFGEKKEADI 285 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKT 320 +K K +G+ + ++E G+ +T Sbjct: 286 ELRIPQVNKAKEMLGFSAKVDLEEGIRRT 314 >gi|327538659|gb|EGF25311.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica WH47] Length = 361 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 39/342 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV+D V+ +D + N + + + N F ++ DI Sbjct: 43 RILVTGGAGFLGSHLCERLVSDGH-DVICLDNFFTSQKTNVVHLLDKPN-FELIRHDI-- 98 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T+++G+ + L Sbjct: 99 -----TLPIHLEVDQIYNMACPAAPGHYQFNPIKTIKTSVMGSI----------NMLGIA 143 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG ++ +E P + Y K ++ L + + + Sbjct: 144 KRCGARILQASTSEVYGDPEQHPQTESYRGSVNPIGIRACYDEGKRVAETLFMDYHRSNN 203 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP + F +++ I + + G + ++GDG R + Y +D V + Sbjct: 204 VDVRIVRIFNTYGPRMHPFDGRVVANFIRQALAGDDITIFGDGSQTRSFCYRDDLVEVII 263 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ G IG NIG +E F I L + I + S ++LI P D Sbjct: 264 RMMNCDGFIGP-VNIGNPHE-------FTIRQLAEKTIELTGSSSKLIE--APLPADDPT 313 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW-WRP 333 R D S K ++ W P+ +E GL T+ W+ N +RP Sbjct: 314 RRRPDISLAKEKLDWEPKIELEQGLKHTIDWFKTINLGDYRP 355 >gi|260887634|ref|ZP_05898897.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|260862650|gb|EEX77150.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 313 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 36/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++VTGGAGFIGS L R+L+ + +V +D L+ N E +++DI Sbjct: 4 LNILVTGGAGFIGSHLVRHLLAKGE-KVTALDNLSTGLAENLPPEAK------LVEMDIL 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + DAIV+ AA++ VD SI N++GT +LE R Sbjct: 57 D-EDLPKVVAAGAFDAIVHLAAQTMVDTSIKNPLLDTRENLMGTVQVLEAAR-------- 107 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R + ST YG + D E P P S Y +K S + + + YG+ Sbjct: 108 -AANVKRVIFASTAAAYGDVKEDDLPVREAQPTEPMSFYGLSKLSVEKYLEMYRKIYGME 166 Query: 179 VLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 ++ +N YG +I + + EG + +YGDG+ RD++Y D + Sbjct: 167 YVVLRFANVYGERQGDGGEGGVISIFAKAVAEGRDITIYGDGEQTRDFVYAGDIAEGILA 226 Query: 236 VLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L+ + YN+ E R+ + ++ EI ++PK + +R G Sbjct: 227 ALRTEEVNAAYNLSTQTETSLRELVSLLAEI--CGREIVPK---------YGAEREGDIY 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +S+ + + W P + GL +T ++ Sbjct: 276 KSMLSNSRARRGLDWQPATTLAEGLRRTYEYF 307 >gi|159902007|gb|ABX10737.1| dTDP-glucose 4,6-dehydratase [uncultured planctomycete 13FN] Length = 311 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 34/329 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ + +V+ +D + GN ++++ + + F ++ DI Sbjct: 4 VLVTGGAGFLGSHLCDRLI-ERGDEVICLDNF-FTGNKDNVRHLLGHDRFELVRHDIVHP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + D I N A + + + I T+ +G + + K Sbjct: 62 FYIEA-------DRIFNLACPASPEAYQHNPIKTIKTSTVGMV----------NVMGLAK 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R L ST EVYG +ED P P S Y K ++ L++ + + + Sbjct: 105 RCGARVLHASTSEVYGDPQVHPQTEDYWGHVNPIGPRSCYDEGKRIAESLMMNYHEAHDV 164 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P ++I I + + G + +YG+G R + Y D + + Sbjct: 165 QIRIIRIFNTYGPRMDPNDGRVISNFINQALRGEPLTIYGEGTQTRSFCYCSDLIEGMLR 224 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 ++ + NIG E + + E+ + A + S + +L +D P +R Sbjct: 225 LMDQDDHTGPVNIGNPTE----NTMLELAEAVIAAVGSSSTIAQL-PLPKDDP---QRRC 276 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K + W PQ +++ GL T+ WY Sbjct: 277 PDITLAKQWLDWTPQVDLQQGLGNTIEWY 305 >gi|330970296|gb|EGH70362.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 331 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 42/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + + L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVAKRLC-ELGVEVVGID------NLNDYYSVELKQSRLALLQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDAEGLSALFSQNGFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIGER-----YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G +NIG K ++ V D L E R Sbjct: 225 VESILRLRLLPPDAVGSEPPHRLFNIGRGQPVKLLEFV-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + G + D S + I + PQ ++++G+ V WY ++ Sbjct: 277 YLPLQAGDVLQTWADVSALSQWIDFQPQVSVDTGVRAFVDWYREH 321 >gi|126172326|ref|YP_001048475.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS155] gi|304411990|ref|ZP_07393600.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS183] gi|307305885|ref|ZP_07585631.1| NAD-dependent epimerase/dehydratase [Shewanella baltica BA175] gi|125995531|gb|ABN59606.1| UDP-glucuronate 5'-epimerase [Shewanella baltica OS155] gi|304349540|gb|EFM13948.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS183] gi|306911378|gb|EFN41804.1| NAD-dependent epimerase/dehydratase [Shewanella baltica BA175] Length = 335 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L L +V+ ID L Y NL L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCL-LGHEVIGIDNLNDYYDVNLKLARLDLLQTLDNFHFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGIAALFARHAFQRVIHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKK------------GRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V K G +NIG + + +D I L DAL K+ + Sbjct: 231 VQAKPPSPNTDWTVDAGTPATSSAPYRVFNIGNGSPVQLLDF---ITALEDALGIKANKN 287 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ +PG D+S + +G+ P ++ +G+ + V WY Sbjct: 288 -----FLPMQPGDVHSTWADTSDLFDAVGYKPLVDINTGVAQFVNWY 329 >gi|224532500|ref|ZP_03673125.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|224512572|gb|EEF82948.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] Length = 355 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKDINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVGDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|166367275|ref|YP_001659548.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa NIES-843] gi|166089648|dbj|BAG04356.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa NIES-843] Length = 316 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 144/329 (43%), Gaps = 32/329 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVDI 59 IVTG AGFIGS L + L+ QV+ ID+ Y +L +++ F ++ DI Sbjct: 5 IVTGVAGFIGSNLAQKLLEQGD-QVIGIDQFNDYYDPSLKRKNAHILAKYPEFQLIEADI 63 Query: 60 CD---RECIRSALKEFQPDAIVNFAAESHVDRSIL-GADEFITTNIIGTFILLEETRLWW 115 R+ ++ + + + AA++ V S G ++ NI T I+LE + Sbjct: 64 QALDWRQLLQGV------EVLFHQAAQAGVRASWGDGFRQYTERNINATQIILEAAK--- 114 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + R + ST VYG+ + E + P SPY TK +++ L + + Sbjct: 115 -----ETPSLQRMVFASTSSVYGNAETMPTPETLCPQPVSPYGITKLAAERLCWLYHQNF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV YGP P+ I G + +YGDG+ RD+ ++ D V A Sbjct: 170 NVPVTALRYFTVYGPRQRPDMAFHKFFQAAIAGKPIGIYGDGKQTRDFTFISDAVAANLA 229 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +GE +NIGG + +D++ + ++ P SH L R G R Sbjct: 230 AALVPEAVGEVFNIGGGSRVVLLDVLDTMAKVIGK--PIERSHQGLAR------GDARHT 281 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A D +K ++ +G+ PQ ++ GL + W Sbjct: 282 AADVTKARTILGYNPQVSLAEGLAQEWQW 310 >gi|66048330|ref|YP_238171.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae B728a] gi|63259037|gb|AAY40133.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 331 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 42/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + + L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVAKRLC-ELGVEVVGID------NLNDYYSVELKQSRLALLQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDAEGLSALFAQNGFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G + +NIG K ++ V D L E R Sbjct: 225 VESILRLRLLPPDAVGSEPPHQLFNIGRGQPVKLLEFV-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + G + D S + I + PQ ++++G+ V WY ++ Sbjct: 277 YLPLQAGDVLQTWADVSALSQWIDFQPQVSVDTGVRAFVDWYREH 321 >gi|304408156|ref|ZP_07389805.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] gi|304342844|gb|EFM08689.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] Length = 321 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 147/335 (43%), Gaps = 46/335 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ ++TG +GF+GS + YL+ + V V+ + ++ + I + ++ ++ Sbjct: 5 LKALITGISGFVGSHMAEYLLAE---GVDVVGTIRQRSRMDHIAHIQKD--IHLVECELR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE-------TRL 113 D + +++ +PD + + AA+S V S + I N++G L E T++ Sbjct: 60 DPLSVEQLMEKERPDYVFHLAAQSFVPTSWNSPIDTIHNNVVGQIHLFEAIRRFNLPTKV 119 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +C S++ + ++ EV E+ P P SPY+ +K + DYL + Sbjct: 120 QIACSSEE------YGEVHPHEV-------PIREENPIRPLSPYAVSKVAQDYLGYQYYR 166 Query: 174 TYGIPVLLSNCSNNYGPY---HFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVED 228 +YGIPV+ + N+ GP +F I + +G V G+ + RD+ V D Sbjct: 167 SYGIPVVRTRTFNHTGPRRGENFVTSNFAKQIAEIEKGLRPPVIHVGNLEAKRDFTDVRD 226 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VRA +L L+KG GE YNI + +D ++ S + + +E P Sbjct: 227 VVRAYWLALEKGTPGECYNIASGS-----------CVTIDEMLQLLLSLSSVNVTVEQDP 275 Query: 289 GHDRRYAI-----DSSKIKSEIGWFPQENMESGLN 318 R + D+SK + GW P+ E + Sbjct: 276 ARMRPSDVEILLGDASKFMAHTGWKPEVPFEQTMQ 310 >gi|15678403|ref|NP_275518.1| UDP-glucose 4-epimerase related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2621436|gb|AAB84881.1| UDP-glucose 4-epimerase related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 332 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 36/335 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG +GS L L V+++D L+ + N I + F++ DI D Sbjct: 14 VLVTGGAGCVGSNLTGNLAK-AGANVIILDNLSSSYEWN----IPEYENIEFVKGDILDD 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E ++ KE +PD + + AA S+ ++ + N +G +LE +L Sbjct: 69 EVLKRVFKE-RPDYVFHLAAHFANQNSVDNPEKDLLVNGLGILKVLEYAQL--------- 118 Query: 123 KDQFRFLQISTD-EVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VYG K F E D+ + +PY TK + + + Y +P++ Sbjct: 119 VGVERFVYSSSGCGVYGLDSKIPFEEHDISISLHTPYQVTKLLGELYTNYFHNLYEMPIV 178 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 + N +GP P K +IP + + + GDG RDW +VED VR L + Sbjct: 179 NARFFNVFGPGEVPGKYRNVIPNFFYWAMNQQPLPITGDGSETRDWTFVEDIVRGLMAMG 238 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD----R 292 +++ IGE N+G E + V E+ +++ L TE + RP D Sbjct: 239 VRREAIGEAINLGSGTEHQ----VIEMAGIINEL-------TENPAGVVYRPRRDWDAKT 287 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R K + + + PQ + GL +T W+ +N Sbjct: 288 RLLSSIDKARRLLDYEPQVSFREGLERTHRWFTEN 322 >gi|33861766|ref|NP_893327.1| putative nucleotide sugar epimerase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640134|emb|CAE19669.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 341 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 163/357 (45%), Gaps = 60/357 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFS----- 53 ++VTG AGFIGS+L LV+ +V+ +D L Y+ +L + LKEI +S F+ Sbjct: 4 ILVTGSAGFIGSSLSIKLVHK-GFRVIGVDNLNSYYSVSLKKDRLKEIIKSTKFNKGKYE 62 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 I + + +++P +VN AA++ V S++ +++ +N++G ++ ++ Sbjct: 63 GFNFSIENINELEKLFTKYKPKFVVNLAAQAGVRYSLIDPHQYVQSNLVGFHNIIYLSK- 121 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSSPYSATKASSDY 166 K D F+ S+ VYG + +MP+N P S Y+ATK ++ Sbjct: 122 --------KYDVRNFIYASSSSVYGG------NTNMPFNESQSVDHPVSFYAATKKCNEV 167 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLY 225 + ++ H Y +P YGP+ P+ + P+ T+ I G + ++ +G+ +RD+ Y Sbjct: 168 IAHSYSHIYDLPTTGLRFFTVYGPWGRPD-MAPMIFTKAILSGDEINIFNNGEMMRDFTY 226 Query: 226 VEDHVRALY-LVLKKGRIGER-----------------YNIGGNNERKNIDIVFEIGFLL 267 ++D V + V K + +N+G N K + + LL Sbjct: 227 IDDVVDGIVGCVYKSAESSDNFNRDKPDPSISFAKHKIFNVGNGNPIKLMKFI----ELL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + I KS F + G + + +K+ IG+ P+ N+ G+ K V WY Sbjct: 283 ELSIGKSAKKI----FKPMQTGDVIATSANINKLSDWIGYEPKINLTEGIGKFVKWY 335 >gi|332716104|ref|YP_004443570.1| dTDP-glucose 4-6-dehydratase [Agrobacterium sp. H13-3] gi|325062789|gb|ADY66479.1| dTDP-glucose 4-6-dehydratase [Agrobacterium sp. H13-3] Length = 340 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 45/336 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+ +V+ +D L+ +N ++ + + F ++ D+ Sbjct: 24 RVLVNGGAGFLGSHLCERLLA-CGHEVICLDDLSTGRTVN-VEHLQANKRFLMVEHDVRK 81 Query: 62 RECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +L I NFA+ + R +G + TN++G +LE R + + Sbjct: 82 PYDIDVSL-------IFNFASPASPPDYQRDPVGT---LLTNVLGAVNVLEVARRCGATV 131 Query: 119 SQDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 +Q ST EVYG + F P + Y K S++ L + Sbjct: 132 ----------VQSSTSEVYGDPLVNPQPESYFGNVNTIGPRACYDEGKRSAETLFFDYHR 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ + + N YGP P+ +++ I + ++GS + +YGDG R + YV+D + Sbjct: 182 FYGVDIKVGRIFNTYGPRMRPDDGRVVSNFIVQALKGSDITIYGDGSQTRSFCYVDDLID 241 Query: 232 A-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRP 288 L K N+G E + L D +I + S + ++ D P Sbjct: 242 GFLRFSAKPKDCTGPINLGNPTE-------IPVRQLADIVIRMTNSRSRIVHLPAAIDDP 294 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D S+ K + W P+ +E+GL KT+ ++ Sbjct: 295 QQRRP---DISRAKEMLRWQPRVPLETGLEKTIVYF 327 >gi|288941925|ref|YP_003444165.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] gi|288897297|gb|ADC63133.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] Length = 340 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M++++TG AGFIGSAL L+ + V+ +D L ++ LKE + ++ + Sbjct: 1 MKILITGSAGFIGSALSLRLL-ERGDTVIGVDNLNDYYDVR-LKEARLARTLDHPNYTDV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + + +P+ +VN AA++ V S+ +++TN++G +LE Sbjct: 59 RLDIEDGAGLTEVFRTHRPERVVNLAAQAGVRYSLENPMAYVSTNLVGFANILE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C + + S+ VYG+ + FS D +P S Y+A+K +++ + + H Sbjct: 113 -CCRHHGVEHLVY--ASSSSVYGANTEMPFSVHDNVDHPLSLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + ++ G + ++ GQ+ RD+ YV+D V + Sbjct: 170 YRLPTTGLRFFTVYGPWGRPDMALFKFTRAILAGEPIQVFNYGQHRRDFTYVDDIVEGVI 229 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VL + G YNIG N + ++++ I L L K + Sbjct: 230 RVLDRVPAGNPDWSGAKPDPASSRAPYRVYNIGNN---QPVELMEYIAVLEQCLGRK--A 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 EL+ +PG D + + + G+ P + G+ + V WY D Sbjct: 285 EMELLPL---QPGDVPDTFADVTDLVRDTGYKPDTPVAVGVARFVAWYQD 331 >gi|145300225|ref|YP_001143066.1| UDP-glucuronate 5'-epimerase [Aeromonas salmonicida subsp. salmonicida A449] gi|142852997|gb|ABO91318.1| UDP-glucuronate 5'-epimerase [Aeromonas salmonicida subsp. salmonicida A449] Length = 336 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/362 (24%), Positives = 150/362 (41%), Gaps = 56/362 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS--QSNL------- 51 M+ +VTG AGFIG + R L + QV+ +D NLN E+S Q+ L Sbjct: 1 MKYLVTGAAGFIGFHVARRLC-EAGHQVVGLD------NLNDYYEVSLKQARLARLLPFP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F Q ++ DR+ + + Q + +++ A++ V S+ + +N+ G +LE Sbjct: 54 HFHFEQRELADRDAMANLFTSGQFERVIHLGAQAGVRHSLENPFAYADSNLTGMLTVLEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG D F +E +P S Y+ATK S + + Sbjct: 114 CR---------QHGINHLIYASSSSVYGLSDLMPFCAEQRVDHPVSLYAATKKSGELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ YG+P YGP+ P+ I ++ G + +Y G RD+ Y++D Sbjct: 165 AYSALYGLPTTGLRFFTVYGPWGRPDMAIAKFTRAILAGEPIDVYNQGLLSRDFTYIDDI 224 Query: 230 VRALYLVLK------------KGRIGER------YNIGGNNERKNIDIVFEIGFLLDALI 271 V + V + +G + E NIG + +D + + LD Sbjct: 225 VDGILAVAELPPRANPHWRASQGSLAESAAPYRLLNIGNGQPVRLLDFIEALEQALDK-- 282 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 + R + + G DS + + G P + G+ + V WYLD ++ Sbjct: 283 ------PAIKRMLPMQAGDMHATWADSEPLHTLTGTHPATPLRQGVAEFVRWYLD---YY 333 Query: 332 RP 333 RP Sbjct: 334 RP 335 >gi|307299601|ref|ZP_07579398.1| GDP-mannose 4,6-dehydratase [Thermotogales bacterium mesG1.Ag.4.2] gi|306914737|gb|EFN45126.1| GDP-mannose 4,6-dehydratase [Thermotogales bacterium mesG1.Ag.4.2] Length = 355 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 18/251 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV-D 58 ++TG G GS L L+ D ++ I + + + N + K+ + ++ FL D Sbjct: 6 LITGITGQDGSYLAELLL-DKGYEIHGIIRRSSSFNTKRIDHLYKDPHERDVNLFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S A+ ++ +GT LLE L Sbjct: 65 LTDSTNLIRLIQEIQPDEIYNLAAQSHVKVSFETAEYTANSDGLGTLRLLEAIHF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 +KK +F Q ST E+YG + + E P+ P SPY+A K + ++ + + YGI Sbjct: 121 GLEKKT--KFYQASTSELYGKVQETPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIF 178 Query: 178 ---PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 +L ++ S G F + I A +R+ G LY G+ RDW Y D+V+A+ Sbjct: 179 GSNGILFNHESPRRGET-FVTRKITRAASRISHGLQDRLYLGNMDAKRDWGYAPDYVKAM 237 Query: 234 YLVLKKGRIGE 244 +L+L++ G+ Sbjct: 238 WLMLQQEEPGD 248 >gi|302340710|ref|YP_003805916.1| NAD-dependent epimerase/dehydratase [Spirochaeta smaragdinae DSM 11293] gi|301637895|gb|ADK83322.1| NAD-dependent epimerase/dehydratase [Spirochaeta smaragdinae DSM 11293] Length = 336 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 35/343 (10%) Query: 2 RLIVTGGAGFIGSA-LCRYL-----------VNDLKIQVLVIDKLTYAG----NLNSLKE 45 +++VTG AGFIG A +C L +ND L +L G + K Sbjct: 3 KILVTGAAGFIGHATVCTLLDAGWTVVGIDSINDYYDTALKYARLHTTGIGEEGVEYGKM 62 Query: 46 ISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 I S + F+Q+ + DR+ + +E D + N AA++ V S+ + +N+ G Sbjct: 63 IGSSCYPEYRFMQLALEDRDAVARLFREENFDVVCNLAAQAGVRYSLENPFAYADSNLTG 122 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKA 162 +LE R D + S+ VYG F E D NP S Y+ATK Sbjct: 123 FLSILEACR---------HADVSYLVYASSSSVYGENRSVPFRESDRVDNPVSLYAATKK 173 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 +++ + A+ YG + YGP+ P+ L ++ M EG + ++ +G RD Sbjct: 174 ANELMASAYSRLYGFSTVGLRFFTVYGPWGRPDMAPTLFLSAMFEGRPIKVFNNGNMKRD 233 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + Y++D V + V+ + + + K +D+ I L + YS + R Sbjct: 234 FTYIDDIVSGVVQVISSPKNDGSHTLYNIGRGKPVDLSEFIDLL------EKYSGRKAQR 287 Query: 283 -FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D+S ++ + + P +E+G+ + V WY Sbjct: 288 NLLPIQPGDVPITWADTSCLERDFAYRPSTPVEAGIAQFVEWY 330 >gi|310778199|ref|YP_003966532.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] gi|309747522|gb|ADO82184.1| NAD-dependent epimerase/dehydratase [Ilyobacter polytropus DSM 2926] Length = 367 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 98/355 (27%), Positives = 145/355 (40%), Gaps = 52/355 (14%) Query: 4 IVTGGAGFIGSALCRYLVN---------------DLKIQV-----------LVID--KLT 35 ++TG +GFIGS L L+ DL I+V ID +L Sbjct: 5 LMTGASGFIGSHLVEKLLKEGNRVICVDNFNDYYDLSIKVENTLESTGNVQCTIDNVQLE 64 Query: 36 YAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADE 95 L LKE S + VDI D E + E + D +V+ AA + V SI Sbjct: 65 KVKRLKGLKETVDSENYILEVVDIRDLESLEKIFSENKIDTVVHLAARAGVRPSIEDPIL 124 Query: 96 FITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS 154 + N GT +LE R + + S+ VYG+ F E D+ Sbjct: 125 YQEVNGRGTQNILECCRKYGVK---------NIVAASSSSVYGNNKVVPFKETDVVDYAI 175 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 SPY+ATK S++ + + Y I + YGP P+ I + ++ G + +Y Sbjct: 176 SPYAATKKSNEVMGHVYHSLYKINMAFLRFFTVYGPRQRPDLAINKFTSLILAGEEIPVY 235 Query: 215 GDGQNVRDWLYVEDHV----RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 GDG RD+ Y+ D V R++ V + E +NIG N+ +++ Sbjct: 236 GDGSTSRDYTYIADIVDGICRSIDYVENNENVYEIFNIGSNSPVSLAEMI--------KT 287 Query: 271 IPKSYSHTELIRFIEDRPGH-DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I K I + +PG DR YA D +K+K G+ P E G+ K V WY Sbjct: 288 IEKVVGIKAKINRLPMQPGDVDRTYA-DVTKLKEMTGYNPSLTFEEGIRKFVDWY 341 >gi|229106036|ref|ZP_04236657.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-28] gi|228677431|gb|EEL31687.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-28] Length = 338 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 46/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +++TGGAG+IGS C L+N+ +++V+D L+ + +LN +KEI+ F F Sbjct: 1 MAILITGGAGYIGSHTCIELLNN-NYKIIVVDNLSNSSIESLNRVKEITGKQ-FKFYNES 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +RE + E +A+++FA V S + NII T IL C Sbjct: 59 VLNREKMNGIFLENNIEAVIHFAGFKAVGESTTIPLTYYYNNIISTIIL---------CD 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 K + +F+ S+ VYG +E+ P + ++PY TK + ++ G Sbjct: 110 VMQKHNVKKFIFSSSATVYGIPKTSPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADGEW 169 Query: 178 PVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 + L N +G P P L+P +T++ G + ++G DG Sbjct: 170 SIALLRYFNPFGAHQSGRIGEDPNGIPNNLMPY-VTQVAVGKLEELNIFGNDYPTKDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+AL VL+ I + YN+G +++V + IP Sbjct: 229 VRDYIHVVDLAKGHVKALEKVLETTGI-DAYNLGTGKGYSVLEMVNAFEKVSGKKIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + I R G D SK K E+GW + +E + W ++N Sbjct: 285 -----YKIIGRRSGDVAICFADVSKAKRELGWEAEYGLEEMCLDSWRWQVNN 331 >gi|227534092|ref|ZP_03964141.1| UDP-glucose 4-epimerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188273|gb|EEI68340.1| UDP-glucose 4-epimerase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 316 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 31/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDR 62 +VTGGAGFIGS L L+ D K V ++D L+ L+E I S+ +F + I D Sbjct: 10 LVTGGAGFIGSNLTELLLTDPKNTVTIVDDLSMG-----LRENIPDSDRVTFYEHSITDH 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + + D IV AA + V S+ T ++ +E L S L + Sbjct: 65 DFMSRLLIDGKFDYIVLLAAIASVADSV--------ERPYATHLVNQEANL--SMLETLR 114 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q RF ++ S+ VYG +E M P + Y+ K +++ VL +G Y +PV Sbjct: 115 THQIRFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P+ ++ M++ +GDG+ RD++YV D VRA+ Sbjct: 175 VCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRG 234 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ + N ++ +++ ++ L+ L K+ T + E R G R Sbjct: 235 LLETPSARDDVFNVANGQQTSLN---QVAKELEKLTGKTLHAT----YQEPRLGDIRDSY 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVC 322 K+ + + P + GL K V Sbjct: 288 AQVDKL-DQFEFMPHTPLAEGLAKYVA 313 >gi|90422944|ref|YP_531314.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisB18] gi|90104958|gb|ABD86995.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisB18] Length = 327 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 35/340 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M ++VTG AGFIG + R L+ V+ +D L Y L L + F F+Q Sbjct: 1 MSILVTGAAGFIGFHVARELLAAGH-HVVGLDSLNDYYDPALKRARLSLLQADAQFEFVQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ DR I + +++ AA++ V SI ++ N+ G +LE R Sbjct: 60 ADLADRAAIADLFVREKFPVVIHLAAQAGVRYSISHPYAYVDANLQGFINVLEGCR-HNG 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + S+ VYG+ K FS D +P S Y+ATK +++ + ++ H Y Sbjct: 119 CQ--------HLIYASSSSVYGANTKLPFSVADRTDHPVSLYAATKKANEVMAHSYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 +P YGP++ P+ + L ++ G + L+ G+ RD+ Y++D V A+ Sbjct: 171 RLPTTGLRFFTIYGPWYRPDMALFLFAKAIVAGQPIKLFNHGKMRRDFTYIDD-VTAVVS 229 Query: 235 -LVLKKGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 L+ + + G YN+G ++ + +V AL+ + + Sbjct: 230 RLIDRVPQAGAEAFGTAPAKIYNVGNHHPEDLMRVV--------ALLEQELGREAKKDML 281 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D S + ++G+ P +E G+ K WY Sbjct: 282 PMQPGDVPETFADVSDLIRDVGFSPATAIEHGIGKFAAWY 321 >gi|23016867|ref|ZP_00056619.1| COG1089: GDP-D-mannose dehydratase [Magnetospirillum magnetotacticum MS-1] Length = 330 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 21/331 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TG GF+GS L Y+++ D K QV+ + + +++++ I + +++ D+ Sbjct: 4 RILITGITGFVGSHLADYVLSLDGKYQVIGTKRW-HLSRMDNVRHIQ--DRITWIDCDLT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D R + +PD I + AAES V S ++ N T LL+ W L Q Sbjct: 61 DPISTREMMNIAKPDRIFHCAAESFVSPSWKNPQRYMAMNYNATVNLLD-----W--LHQ 113 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +K + S +E YG + DK + + P +PY+ TK + D + + +YGI Sbjct: 114 NKSSAPFHIPGSGEE-YGDIPEDKLPITPETVLLPVNPYAVTKIAQDLIGFVYHKSYGIN 172 Query: 179 VLLSNCSNNYGP-----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 V+ + N+ GP + P +A+ + + G + R++ +V D V A Sbjct: 173 VIRTRAFNHEGPRRDKVFGIPWYAYQVAMVEAGKMDPLLKVGHIDDRRNFTHVRDMVEAY 232 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ K R GE Y +G + L+ K H +++ RP R Sbjct: 233 WIASTKCRPGELYLVGSEAPETIYTFRQALEMLIGMSTVKGIRHETDPQYV--RPTQVPR 290 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+ K + + GW P+ + ++ L++T+ ++ Sbjct: 291 LIADTKKFRDDTGWEPKISFQTILSETLDYW 321 >gi|332532375|ref|ZP_08408255.1| GDP-mannose 4,6-dehydratase [Pseudoalteromonas haloplanktis ANT/505] gi|332038242|gb|EGI74688.1| GDP-mannose 4,6-dehydratase [Pseudoalteromonas haloplanktis ANT/505] Length = 374 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 40/356 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 ++TG G GS L L+ + +V I + + N + I Q N F D Sbjct: 8 LITGVTGQDGSYLAELLL-EKGYEVHGIKRRASSLNTERVDHIYQDNHEKNQKFFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +K+ QPD + N A+SHV S + + +GT LLE R L Sbjct: 67 LTDSSNLTRIIKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + E P++P SPY+ K + ++V+ + +YG+ Sbjct: 123 GLEKKT--KFYQASTSELYGEVQEIPQKETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ +RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANISQGLESCLYLGNMDALRDWGHAKDYVRMQW 240 Query: 235 LVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLD------ALIPKSYSH 277 ++L++ +I R + + + I++ F G LD A+I + Sbjct: 241 MMLQQDVADDFVIATGKQISVREFVTLSAKEAGIELEF-TGEGLDEIATVKAIIGDNAPA 299 Query: 278 TELIRFIED------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ I RP D SK K+++GW PQ +E ++ V LD Sbjct: 300 LKVGDIIVKVDPRYFRPAEVETLLGDPSKAKAKLGWVPQITVEEMCSEMVANDLDK 355 >gi|242399985|ref|YP_002995410.1| UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase [Thermococcus sibiricus MM 739] gi|242266379|gb|ACS91061.1| UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase [Thermococcus sibiricus MM 739] Length = 317 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 32/264 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ D +V V+D L+ AG+L +LK F F+ D+ Sbjct: 1 MKVLVTGGAGFIGSHLVDRLMEDGH-EVRVLDDLS-AGSLENLKGWIDHERFEFMHGDLR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ A+K DA+ + AA V + TN++ T+ LLE R Sbjct: 59 RRDICEKAVKGV--DAVFHLAANPEVRIGTQSPELLYETNVLITYNLLEAMR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+D S+ VYG ED P P S Y K +++ L+ + HT+ + Sbjct: 109 -KEDVKALAFTSSSTVYGEAKTIPTPEDYGPLEPISVYGGAKLAAEALISGYAHTFDVKA 167 Query: 180 LLSNCSN------NYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 ++ +N N+G Y F KL + + + GDG + +L+V D V A Sbjct: 168 VVFRLANIIGKRSNHGVIYDFINKLKK-------NPNRLEILGDGTQRKSYLHVSDTVEA 220 Query: 233 -LYL---VLKKGRIGERYNIGGNN 252 LYL LK+ +I + YNIG + Sbjct: 221 MLYLFKEFLKEDKIYDAYNIGSED 244 >gi|33595481|ref|NP_883124.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella parapertussis 12822] gi|33599866|ref|NP_887426.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella bronchiseptica RB50] gi|33565559|emb|CAE40201.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella parapertussis] gi|33567463|emb|CAE31376.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella bronchiseptica RB50] Length = 341 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 151/335 (45%), Gaps = 32/335 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG AGFIGS L L+ L V+ +D G+ ++L E+ Q F+F++ Sbjct: 20 LVTGCAGFIGSNLLETLLG-LDQAVVGLDNFA-TGHQHNLDEVRAAVTPEQWARFTFIEG 77 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWW 115 DI D + A++ D +++ AA V RS+ + ITTN IG F+ + Sbjct: 78 DIRDLAACQRAVQGV--DRVLHQAALGSVPRSL---KDPITTNEVNIGGFLNM------- 125 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++D + Q F+ ++ YG E+ NP SPY+ TK ++ + +Y Sbjct: 126 LVAARDAQVQ-AFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY 184 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P+ +IP MI+G V + GDGQ RD+ +VE+ V+ Sbjct: 185 GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVENAVQ 244 Query: 232 ALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A L G + YN+ N R + +FE L AL + S+ + + E R G Sbjct: 245 ANLLAAMAAPEGANQVYNV-AYNARTTLTELFE--HLRRALAGQGVSYEKAPVYAEFRAG 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D K +G+ P ++ GL + WY Sbjct: 302 DVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY 336 >gi|297183095|gb|ADI19239.1| nucleoside-diphosphate-sugar epimerases [uncultured delta proteobacterium HF0200_14D13] Length = 316 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 34/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ + +V+ +D + G ++ + F ++ D+ + Sbjct: 7 RTLVTGGAGFLGSFLCERLLAEGH-EVVALDNF-FTGTKRNVAHLLDHTNFELVRHDVVE 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + T+++G + L Sbjct: 65 PILV-------EVDWIFNLACPASPVHYQYNPVKTVKTSVMGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + +ED P P S Y K ++ LV+ + Sbjct: 108 KRVRARILQASTSEVYGDPEVHPQTEDYWGSVNPIGPRSCYDEGKRVAETLVMDYHRQNQ 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N YGP P +++ I + + L+GDG R + YV D + + Sbjct: 168 VDAKIIRIFNTYGPRMHPNDGRVVSNFIVAALNNEPITLFGDGSQTRSFCYVADLIEGIL 227 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ N+G E F + L + + S +++I E R R Sbjct: 228 RMMQSENFIGPVNLGNPGE-------FTVMELAQKVTELTNSRSKIIA-QEKREDDPTRR 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + ++GW PQ +E GL KT+ ++ Sbjct: 280 RPDISLAQQKLGWQPQVPLEDGLQKTIAYF 309 >gi|239977893|ref|ZP_04700417.1| GDP-mannose 4,6-dehydratase [Streptomyces albus J1074] gi|291449808|ref|ZP_06589198.1| FscMIII [Streptomyces albus J1074] gi|291352757|gb|EFE79659.1| FscMIII [Streptomyces albus J1074] Length = 344 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 31/335 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 R ++TG G GS L +L+ D QV + + G N K+ + SF+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLL-DQGYQVWGLCR----GQANPRKDRIAKLIPELSFVDGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ QPD + N A S V S + N G +LE R+ S L+ Sbjct: 59 MDQGSLVSAVDLVQPDEVYNLGAISFVPMSWQQPELVTEVNGTGVLRMLEAVRIV-SGLT 117 Query: 120 QDK----KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + Q RF Q S+ E+YG + + E ++P SPY KA Y+ + +Y Sbjct: 118 KSSGGSPRGQIRFYQASSSEMYGKVAESPQRETTSFHPRSPYGVAKAFGHYITQNYRESY 177 Query: 176 GI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 G+ +L ++ S G F + I LA+ ++ G L+ G+ RDW + D+V Sbjct: 178 GMYGVSGILFNHESPRRGA-EFVTRKISLAVAQIKLGQMDKLHLGNLDAERDWGFAGDYV 236 Query: 231 RALYLVLKKGRIGERYNIGG---NNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIED 286 RA++L+L++ + G+ Y +G + R I FE +G + ++ Sbjct: 237 RAMHLMLQQEQAGD-YVVGTGAMHQVRDAARIAFEHVGL--------DWQEHVVVDPGLV 287 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RP DS + E+GW P+ + E + V Sbjct: 288 RPAEVETLCADSGNARRELGWEPEVDFEQLMRMMV 322 >gi|26987240|ref|NP_742665.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida KT2440] gi|24981881|gb|AAN66129.1|AE016241_6 NAD-dependent epimerase/dehydratase family protein [Pseudomonas putida KT2440] Length = 310 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 29/323 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS LC L+ D V ++D + G ++L ++ L ++ D+ D Sbjct: 6 ILITGGAGFIGSHLCDALL-DKGYAVRILDDFS-TGRRSNL-QVDHPRL-ELIEGDVADA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A + A+V+ AA + V S+ +N IGT + E R+ Sbjct: 62 GLVTQAAAGCR--AVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHGV------ 113 Query: 123 KDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+ VYG+ +G SED P P +PY+ K +S+ + + +G+ ++ Sbjct: 114 ---RRVLFASSAAVYGNNGEGESISEDTPKAPLTPYAVDKLASEQYLDFYRRQHGLEPVV 170 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +I + R ++G + ++GDG+ RD+LYV D V+ + L Sbjct: 171 FRFFNIFGPRQDPSSPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQAL 230 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ ++ E NIG N + LL AL K I + R G R Sbjct: 231 EQPQVEEGAVNIGLNQATS-------LNQLLAAL-EKVVGSLPAISYAAARSGDIRHSRA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 D+ ++ + + M GL K Sbjct: 283 DNQRLLARFEFAQVTPMVEGLTK 305 >gi|16126617|ref|NP_421181.1| NAD-dependent epimerase/dehydratase family protein [Caulobacter crescentus CB15] gi|221235399|ref|YP_002517836.1| UDP-N-acetylglucosamine 4-epimerase [Caulobacter crescentus NA1000] gi|13423911|gb|AAK24349.1| NAD-dependent epimerase/dehydratase family protein [Caulobacter crescentus CB15] gi|220964572|gb|ACL95928.1| UDP-N-acetylglucosamine 4-epimerase [Caulobacter crescentus NA1000] Length = 324 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 34/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 +IVTG AGF+G + L+ D V+ +D A +LKE + L F+ L++ Sbjct: 6 IIVTGAAGFVGYHVAERLL-DRGETVIGVDVFN-AYYDPALKEARAARLDGRDGFTMLRM 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E + +K +++ AA++ V SI + +N+ G +LE R Sbjct: 64 DIADHEALADLVKASGAQKVIHLAAQAGVRYSIENPFAYERSNLAGHLSVLEACR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGS--LDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG L+ F E P P S Y+ATK S + L ++ Sbjct: 119 ----HAGVEHLVYASSSSVYGDRPLNGDGFRESDPAETPVSLYAATKRSCELLSQSYAKL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG P YGP+ P+ +M++G + +YG+G+ RD+ Y++D V + Sbjct: 175 YGFPQSGLRFFTVYGPWGRPDMAYFSFTEKMLKGETIEVYGEGKMARDFTYIDDIVDGIL 234 Query: 235 LVL-----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 VL K G E YNIG N+ +D++ + L K + + PG Sbjct: 235 GVLDNPPAKGGH--EVYNIGDNDPVGLMDMINTLEAALGIEANKVFRPMQ--------PG 284 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K+ + G+ P+ + GL + V W Sbjct: 285 DVTATYANIDKLHALCGYKPKVKLAEGLARFVDW 318 >gi|77166096|ref|YP_344621.1| UDP-glucuronate 5'-epimerase [Nitrosococcus oceani ATCC 19707] gi|254435821|ref|ZP_05049328.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani AFC27] gi|76884410|gb|ABA59091.1| UDP-glucuronate 5'-epimerase [Nitrosococcus oceani ATCC 19707] gi|207088932|gb|EDZ66204.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani AFC27] Length = 336 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG+AL L+ +V+ +D L Y NL L + F+ + Sbjct: 1 MKIMVTGSAGFIGAALTEKLLKRGD-EVIGVDNLNDYYDVNLKRARLARFQTNPAFTEVP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + +RE +R+ +++P +VN AA++ V S+ ++ +N+ G +LE R + Sbjct: 60 IGLENREALRAIFAKYRPQRVVNLAAQAGVRYSLENPYAYMDSNLYGFLNILENCRHY-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F S+ VYG+ K ++ +D +P S Y+A+K +++ + + H Y Sbjct: 118 -----QVEHLVF--ASSSSVYGANTKMPYAVQDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G + RD+ Y++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPDMALFKFTRNILAGKPIEVYNYGHHQRDFTYIDDIVEGVTR 230 Query: 236 VLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L + G E YNIG + E+G + ++ + Sbjct: 231 TLDRLPAPNANWNGATPEPNTSSAPYRIYNIGNHQP-------VELGKFIK-ILEECLGR 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + ++ ++P +E G+ + V WY Sbjct: 283 EAKKNLLPLQPGDVPATYADVDDLIQDMEFYPATPIEEGIARFVAWY 329 >gi|113475902|ref|YP_721963.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum IMS101] gi|110166950|gb|ABG51490.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum IMS101] Length = 347 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 46/354 (12%) Query: 2 RLIVTGGAGFIGSALCRYLV-------NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF 54 ++++TGGAGF+G L + + KI + V D Y + S + N FS Sbjct: 8 KMLITGGAGFLGYYLVKSALFWNQSVEKSRKIDLTVYD--NYIRGVPSWLTDLEENSFSL 65 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++ DI + + S + +FQ I++ A+ + E + N+ G LLE Sbjct: 66 VKHDIT--QPLPSNIDDFQ--YIIHAASIASPTYYRKYPIETMDANVNGLRFLLE----- 116 Query: 115 WSCLSQDKKDQF--RFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSD 165 C Q K Q FL ST E+YG Y P + Y +K + Sbjct: 117 -YCQQQKHKPQPVEGFLFYSTSEIYGDPTPENIPTPETYRGNVSSTGPRACYDESKRYGE 175 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 L + + Y +P+ ++ NNYGP +++IP ++ G + + DG R + Sbjct: 176 TLCVNFAQQYNLPIKIARPFNNYGPGLKITDKRVIPDFARDILAGKDIVMLSDGSPTRTF 235 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNN-ERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 YV D + Y +L KG+ GE YNIG E +D+ +I L L +YS +++R Sbjct: 236 CYVADAIIGYYKILTKGKQGEAYNIGVEKPEISMLDLANKIVELAGDLF--NYSG-KVVR 292 Query: 283 FIEDRPGHDRRYAIDS--------SKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + D+ Y +D+ +K ++++G+ P +++ GL +++ WY DN+ Sbjct: 293 ----QASADQNYLVDNPNRRCPVIAKARNDLGYNPGISLDEGLKRSLIWYQDNS 342 >gi|134093972|ref|YP_001099047.1| UDP-glucose 4-epimerase [Herminiimonas arsenicoxydans] gi|133737875|emb|CAL60920.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Herminiimonas arsenicoxydans] Length = 339 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 53/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAG+IGS C L+N QV+V+D L + A L + I+ + + F+Q D Sbjct: 1 MKILVTGGAGYIGSHTCVELIN-AGYQVVVVDNLCNSKASVLERVAGITGATI-PFIQAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + R I ++ DA+++FA V S+ + N+ G+ +LL+ Sbjct: 59 LRHRNAIEKIFTQYNFDAVMHFAGLKAVGESVTEPLRYYDNNVEGSLVLLQ--------- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---Y 175 K D + + S+ VYG ED P ++PY +K + ++ H+ + Sbjct: 110 VMAKHDVTKLVFSSSATVYGDPATVPILEDFPLAATNPYGRSKLMIEEMLRDLAHSDPAW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQN 219 I +L ++ S G P P L P + ++ G L YG DG Sbjct: 170 RIALLRYFNPAGAHESGLIGEDPNDIPNNLFPY-VAQVASGRRDLLSVYGDDYPTDDGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HV+ L +L + YN+G + ++ +P Sbjct: 229 VRDYIHVVDLAIGHVKTLEKLLASAAGVQAYNLGTGCGSSVLQMIQAFERASGRRVP--- 285 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 R + RPG D+S + E+GW + ++E +C + W W+ + Sbjct: 286 -----YRVVARRPGDIAVCYADASLAQRELGWRAERSIEQ-----MCV---DTWRWQSMS 332 Query: 336 KE 337 +E Sbjct: 333 EE 334 >gi|321312238|ref|YP_004204525.1| NAD dependent epimerase [Bacillus subtilis BSn5] gi|320018512|gb|ADV93498.1| NAD dependent epimerase [Bacillus subtilis BSn5] Length = 326 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 29/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGS L ++ ++ V V+D + GN +++ ++ F + DI + Sbjct: 15 KFLVTGGAGFIGSNLVEKIL-EMGFYVRVLDNFS-TGNKENIEVFYSNSNFDLQKGDIRN 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + A + D +++ AA V RSI E N+ GT +L ++ Sbjct: 73 LEECQKACEGI--DYVLHQAALGSVPRSIDKPIETNDVNVNGTLNML---------VASK 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ S+ VYG ED NP SPY+ TK + + + Y P + Sbjct: 122 KAKVKRFVYASSSSVYGDDLNLPKIEDRIGNPLSPYAITKLTKELYSKNFNEIYDFPTIG 181 Query: 182 SNCSNNYGPYHFPEKL----IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--LYL 235 N +G P + IP I ++ + GDG RD+ ++++ V+A Sbjct: 182 LRYFNVFGKRQNPNSIYAAVIPKFIKTLLYNKPPIINGDGLQTRDFTFIDNVVQANLKAC 241 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLL-DALIPKSYSHTELIRFIEDRPGHDRRY 294 + K+ G+ +NI ++ I + +I +L ++PK F DR G R Sbjct: 242 LAKEESFGKVFNIAFGQQKTIIQLYSDISRILRKEIVPK---------FGPDRVGDVRHS 292 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +K + + + P ++ +GL T+ WY +N Sbjct: 293 NADINKAMNLLNYKPDYDVATGLRLTIDWYKNN 325 >gi|33597503|ref|NP_885146.1| capsular polysaccharide biosynthesis protein [Bordetella parapertussis 12822] gi|33573931|emb|CAE38248.1| capsular polysaccharide biosynthesis protein [Bordetella parapertussis] Length = 341 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 151/335 (45%), Gaps = 32/335 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG AGFIGS L L+ L V+ +D G+ ++L E+ Q F+F++ Sbjct: 20 LVTGCAGFIGSNLLETLLG-LDQAVVGLDNFA-TGHQHNLDEVRAAVTPEQWARFTFIEG 77 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWW 115 DI D + A++ D +++ AA V RS+ + ITTN IG F+ + Sbjct: 78 DIRDLAACQRAVQGV--DRVLHQAALGSVPRSL---KDPITTNEVNIGGFLNM------- 125 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++D + Q F+ ++ YG E+ NP SPY+ TK ++ + +Y Sbjct: 126 LVAARDAQVQ-AFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY 184 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P+ +IP MI+G V + GDGQ RD+ +VE+ V+ Sbjct: 185 GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVENAVQ 244 Query: 232 ALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A L G + YN+ N R + +FE L AL + S+ + + E R G Sbjct: 245 ANLLAAMAAPEGANQVYNV-AYNARTTLTELFE--HLRRALAGQGVSYEKAPVYAEFRAG 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D K +G+ P ++ GL + WY Sbjct: 302 DVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY 336 >gi|17232205|ref|NP_488753.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7120] gi|17133850|dbj|BAB76412.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7120] Length = 332 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 147/330 (44%), Gaps = 47/330 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+++D L Y G+ + ++++ Q L + D DR Sbjct: 8 ILVTGGAGYIGSHTVLAL-KQAGYDVVILDNLVY-GHRDLVEKVLQVEL---VVGDTGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K DA+++F+A ++V S+ ++ N++GT LLE + + ++ Sbjct: 63 PLLDELFKSRHFDAVMHFSAYAYVGESVSDPAKYYRNNVLGTLTLLEA--MLAASIN--- 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 +F+ ST YG ED P NP +PY ATK + ++ + YG+ + Sbjct: 118 ----KFVFSSTCATYGVPKTVPIPEDHPQNPINPYGATKLMVERILADFDVAYGLKSVRF 173 Query: 182 -------SNCSNNYGPYHFPEK-LIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 +N G H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGANPDGLLGEDHNPETHLIPLVLLTALGKRKFISIFGTDYPTPDGTCIRDYIHV 233 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L LK KG E +N+G GF + +I T L Sbjct: 234 NDLADAHVLGLKYLLKGGDSEVFNLGNGQ-----------GFSVREVIAAGEQVTGLPIT 282 Query: 284 IED---RPGHDRRYAIDSSKIKSEIGWFPQ 310 +E+ RPG K + +GW PQ Sbjct: 283 VEECDRRPGDPPSLIGSGEKARKILGWQPQ 312 >gi|332711220|ref|ZP_08431153.1| UDP-galactose 4-epimerase [Lyngbya majuscula 3L] gi|332350034|gb|EGJ29641.1| UDP-galactose 4-epimerase [Lyngbya majuscula 3L] Length = 336 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 159/353 (45%), Gaps = 56/353 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L+ V+V+D L Y G+ + ++++ + L + D DR Sbjct: 1 MLVTGGAGYIGSHAVLALLA-AGYNVVVLDNLVY-GHRDIVEDVLKVKL---VVGDTNDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +++ A+++FAA ++V S+ ++ N+ GT LLE + K Sbjct: 56 VLLDNLFRDYDISAVMHFAAYAYVGESVTDPAKYYRNNVTGTLTLLEAM-----VAASIK 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K F ST YG ED P NP +PY A+K + ++ + Y + + Sbjct: 111 KLVFS----STCATYGVPKTVPIPEDHPQNPINPYGASKLMVERILSDFHTAYDLKSVTF 166 Query: 182 -------SNCSNNYGPYHFPEK-LIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 167 RYFNAAGADPEGRLGEDHTPETHLIPLVLLTALGKRESISIFGANYPTADGTCIRDYIHV 226 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS-YSHTELI 281 +D HV L +LK G + +N+G N GF + +I + + + I Sbjct: 227 KDLASAHVLGLDYLLKGGD-SQIFNLGNGN-----------GFSVKEVIEAARFVTKQNI 274 Query: 282 RFIE--DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + IE RPG S K + +GW+PQ S +N L N W W Sbjct: 275 KAIECDRRPGDPPALVGSSDKARKLLGWYPQ---YSDINTI----LSNAWQWH 320 >gi|284802915|ref|YP_003414780.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5578] gi|284996056|ref|YP_003417824.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5923] gi|284058477|gb|ADB69418.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5578] gi|284061523|gb|ADB72462.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5923] Length = 327 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELIT-RGYEVVVIDNLR-TGHRESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D + S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 EEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+RAL LK G +N+G +N F + +L+A ++ + E+ Sbjct: 225 QVEDLIDAHIRALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTGKEI 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 + R D I SS SEI GW P Sbjct: 275 PAEVVPRRAGDPGTLIASSDKASEILGWEP 304 >gi|295792722|gb|ADG29285.1| putative UDP-glucose 4-epimerase [Paenibacillus alvei] Length = 328 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 46/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L+ + QV+V+D L+ G+ N++K + +Q DI Sbjct: 1 MSILVTGGAGYIGSHTVQALLEQEE-QVIVVDNLS-TGHQNAVKNVE------LVQCDIR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + +++ +A+V+FAA S V S+ ++ N+ GT LLE + Q Sbjct: 53 DKEALGQVFRKYNIEAVVHFAASSLVGESMQNPGKYYDNNLYGTLCLLE-------IMVQ 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F ST YG+ + +E P++ Y TK + + ++ + +G+ + Sbjct: 106 HGVTKIVFS--STAATYGNPEIIPITESEATKPTNAYGETKLAMESMMQWFDIAHGLKYV 163 Query: 181 LSNCSNNYGPY--------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 N G + H PE LIPL + + + ++ ++G DG +RD++ Sbjct: 164 ALRYFNAAGAHENGIIGEDHQPETHLIPLILQVPLGKRDYISVFGNDYDTADGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++++Y LK G +N+G N ++++ + IP Sbjct: 224 HVRDLADAHIKSIYY-LKSGGESAIFNLGNGNGYSVLEMINAARAVTGHPIPA------- 275 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + E R G ++ K + + W P+ Sbjct: 276 -KMEERRAGDPAVLVANAQKSREILKWEPK 304 >gi|229817053|ref|ZP_04447335.1| hypothetical protein BIFANG_02308 [Bifidobacterium angulatum DSM 20098] gi|229784842|gb|EEP20956.1| hypothetical protein BIFANG_02308 [Bifidobacterium angulatum DSM 20098] Length = 333 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 48/347 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D L G+ ++ ++ F Q D+ Sbjct: 1 MTVMVLGGAGYIGSHMVDRLVAAGKEKVVVVDSLV-TGHRAAVNPAAK-----FYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+E +R +E P DA+++FAA S V S+ ++ N G LLE + + Sbjct: 55 DQEFMRGVFRE-NPDIDAVIHFAAFSLVAESMKEPLKYFDNNTAGMVKLLEVMKEFGV-- 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 KK F ST YG +K ED P P +PY +K + ++ YGI Sbjct: 112 ---KKIVFS----STAATYGIPEKMPIREDDPQKPINPYGESKLMMEKIMRWCDQAYGIK 164 Query: 179 --------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVR 221 V + + G H PE L+P+ + ++ +G + ++G DG NVR Sbjct: 165 FVALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKRDKLMIFGDDYNTPDGTNVR 223 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++ D A L L+ G +N+G + N+ I+ + IP + Sbjct: 224 DYVHPFDLADAHILAVDYLRAGNESNAFNLGSSTGFSNLQILEAARKVTGKEIPAEMA-- 281 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG S K ++ +GW PQ +N++ + W+ Sbjct: 282 ------PRRPGDPDTLIAASDKARTVLGWKPQFDNIDKIIETAWAWH 322 >gi|332878513|ref|ZP_08446234.1| UDP-glucuronic acid decarboxylase 1 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683608|gb|EGJ56484.1| UDP-glucuronic acid decarboxylase 1 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 325 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 34/333 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +V GGAGF+GS LCR L+ +V+ +D L G + ++ ++ S FSF + DI Sbjct: 10 LRALVVGGAGFVGSHLCRRLLQSGYEEVICVDNLQ-TGRIANVADLLGSLHFSFFEHDIV 68 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + AL E I + A + + T+++G+ LLE L++ Sbjct: 69 NEWPVSGALHE-----IYHLACPASPVQYQKSPIHTFKTSVLGSIHLLE--------LAK 115 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +K R L ST EVYG +E P+ S Y K ++ L + Y Sbjct: 116 EKGA--RILFTSTSEVYGDAQVSPQNESYWGNVNPFGVRSCYDEGKRGAETLFHDYHEEY 173 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP E +++ I + + G + ++GDG R + YV D + A+ Sbjct: 174 GVDTRIIRIFNTYGPRMSAEDGRVVSNFIVQALRGEPLTIHGDGTQTRSFQYVSDLIEAI 233 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ G NIG E + L + ++ + S + ++ +D P Sbjct: 234 VRTMQDGVPHCPINIGNPYE-------ISVNDLAERVLRMTGSRSSIVYKPLPQDDPCRR 286 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R ++ + GW P ++ GL++T+ ++ Sbjct: 287 RPDITLAASVLG--GWKPVVGLDEGLSQTIAYF 317 >gi|295132439|ref|YP_003583115.1| dNTP-hexose dehydratase-epimerase [Zunongwangia profunda SM-A87] gi|294980454|gb|ADF50919.1| putative dNTP-hexose dehydratase-epimerase [Zunongwangia profunda SM-A87] Length = 312 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 38/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC+ ++++ +V+ +D + G+ ++ + ++ F ++ DI + Sbjct: 4 RILITGGAGFIGSHLCKRMLDEGN-EVICLDNY-FTGSKKNIVTLMENPYFEMVRHDITE 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 S E D I N A + + + T+++GT + L Sbjct: 62 -----SYYAEV--DEIYNLACPASPVHYQYNPIKTMKTSVMGTI----------NTLGLA 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + LQ ST EVYG D E P S Y K ++ L + + G Sbjct: 105 KRVNAKILQASTSEVYGDPDVHPQPETYWGNVNTIGPRSCYDEGKRCAETLCMDYHLQNG 164 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP PE +++ I + ++G + ++GDG R + YV+D V + Sbjct: 165 VDVKIIRIFNTYGPNMNPEDGRVVSNFIVQALKGEDITIFGDGTQTRSFQYVDDLVEGMV 224 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L+ + NIG NE F + L + ++ + S ++L+ +D P D + Sbjct: 225 RLMGTPNGFWKPVNIGNQNE-------FTMLELAENVLNITGSKSKLV--FKDLPKDDPK 275 Query: 293 RYAIDSSKIKSEI-GWFPQENMESGLNKTVCWY 324 + D S+ + GW P+ +E GL KT+ ++ Sbjct: 276 QRQPDISRADKYLNGWKPKIQLEEGLKKTIAYF 308 >gi|291615357|ref|YP_003525514.1| GDP-mannose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] gi|291585469|gb|ADE13127.1| GDP-mannose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] Length = 373 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 30/277 (10%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +++ QPD I N AA+SHV S + ++ +G+ +LE R+ Sbjct: 67 DMTDSSSLTHIIQKVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGSLRILEAIRM---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YGI Sbjct: 123 LGLTKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGI 180 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ G LY G+ ++RDW + +D+V Sbjct: 181 YACNGILFNHESPIRGETFVTRKITRALARIKLGLQECLYLGNMNSLRDWGHAKDYVEMQ 240 Query: 234 YLVLKKGR-------IGERYNIGG--NNERKNIDIVF--------EIGFLL-DALIPKSY 275 +L+L++ + G +Y++ N K + + E+G+L+ + +P + Sbjct: 241 WLMLQQDKPEDFVIATGVQYSVRDFVNAAAKELGMEIRWEGKDADEVGYLVTQSSVPGTQ 300 Query: 276 SHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 S ++R RP D+SK K+++GW P+ Sbjct: 301 SSRAIVRVDPRYFRPTEVETLLGDASKAKNKLGWTPK 337 >gi|225159061|ref|ZP_03725370.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV2] gi|224802374|gb|EEG20637.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV2] Length = 312 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 38/333 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGF+GS LC L+ + +V+ +D N I N F ++ D+ Sbjct: 3 LRILVTGGAGFLGSHLCDRLI-EAGHEVICLDNFFTGRRTNVAHLIGHPN-FELVRHDVI 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +F+ D I N A + A + + T+++G +CL Sbjct: 61 DP-------FKFEVDQIYNLACPASPVHYQYNAIKTVKTSVMGAI----------NCLGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ + R Q ST EVYG D + + Y NP S Y K ++ L + + Sbjct: 104 AKRTRARVFQASTSEVYG--DPSVHPQPESYWGNVNPIGIRSCYDEGKRCAETLFMDYHR 161 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + V + N YGP P +++ I + ++G + +YGDG R + YV+D + Sbjct: 162 QNKVDVRIVRIFNTYGPRMHPNDGRVVSNFIVQALKGEDLTIYGDGTQTRSFCYVDDLIE 221 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ++ + + NIG E + + E+ L K H D P Sbjct: 222 GFIRLMNQDHVTGPINIGNPGEFTMLQLA-ELTLKLIGGKSKIVHHP----LPADDPKQR 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + + + W P +E GL +T+ ++ Sbjct: 277 RP---DITLAQKHLNWSPTIPLEDGLKRTIEYF 306 >gi|83814755|ref|YP_444740.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855] gi|83756149|gb|ABC44262.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855] Length = 322 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 139/332 (41%), Gaps = 35/332 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 R ++TGGAGF+GS LC L+ + V+ +D L N+ L E+ Q F F++ D+ Sbjct: 3 RTLITGGAGFLGSHLCDRLIEEGH-SVVCMDNLITGDTENIEHLFELGQDR-FRFVEYDV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L D +++FA+ + D + + + +GT L Sbjct: 61 TDYLHVGGEL-----DYVLHFASPAAPDDYLQYPIQTLKVGALGTH----------KALG 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 K R L ST EVYG ED P Y K + L +A+ Sbjct: 106 LAKAKDARLLLASTSEVYGDPLVHPQPEDYWGNVNPIGERGVYDEAKRFGEALAMAYHRY 165 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ ++ N YGP + + +P + + + G + +YGDG R + YV+D V Sbjct: 166 HGVETRIARIFNTYGPRMRVDDGRALPTFMGQALRGEPLTVYGDGSQTRAFCYVDDLVEG 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY +L E N+G +E + EI + S S ED P + Sbjct: 226 LYRLLMSD-WAEPVNLGNPDEITIKEFAEEI-----IEVTGSDSDITYEPLPEDDP---Q 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ K +GW P+ + GL +T+ ++ Sbjct: 277 VRQPDISRAKEVLGWAPEVDRREGLERTLEYF 308 >gi|15594789|ref|NP_212578.1| nucleotide sugar epimerase [Borrelia burgdorferi B31] gi|195942023|ref|ZP_03087405.1| nucleotide sugar epimerase [Borrelia burgdorferi 80a] gi|216264803|ref|ZP_03436795.1| WbnF [Borrelia burgdorferi 156a] gi|221218130|ref|ZP_03589596.1| hypothetical protein BBU72A_0454 [Borrelia burgdorferi 72a] gi|224533560|ref|ZP_03674149.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi CA-11.2a] gi|225548649|ref|ZP_03769696.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 94a] gi|225549583|ref|ZP_03770549.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 118a] gi|2688351|gb|AAB91508.1| nucleotide sugar epimerase [Borrelia burgdorferi B31] gi|215981276|gb|EEC22083.1| WbnF [Borrelia burgdorferi 156a] gi|221192078|gb|EEE18299.1| hypothetical protein BBU72A_0454 [Borrelia burgdorferi 72a] gi|224513233|gb|EEF83595.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi CA-11.2a] gi|225369860|gb|EEG99307.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 118a] gi|225370679|gb|EEH00115.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 94a] gi|312148497|gb|ADQ31156.1| WbnF [Borrelia burgdorferi JD1] gi|312149242|gb|ADQ29313.1| WbnF [Borrelia burgdorferi N40] Length = 355 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKAINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVGDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|303325447|ref|ZP_07355890.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] gi|302863363|gb|EFL86294.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] Length = 325 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 36/334 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIG+ L R+LV D V + D L Y GNL +L+ + D+ Sbjct: 8 VLITGGAGFIGANLARHLV-DAGATVTIADSLIPEYGGNLANLEGFRHKVFLNI--TDVR 64 Query: 61 DRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEF--ITTNIIGTFILLEETRLWWSC 117 D + ++ D + N A + SH+D +D F + N +LE +C Sbjct: 65 DTHALSHLIR--GQDFLFNLAGQTSHMDSM---SDPFTDLEINAKAQLSILE------AC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + F T ++YG D ED P P K + ++ L + + YG+ Sbjct: 114 RAHNPGVKIVF--AGTRQIYGRPDHLPVDEDHPIRPVDINGIHKVAGEWYHLLYNNVYGL 171 Query: 178 PVLLSNCSNNYGP----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + +N YGP + + + I ++EG ++G G+ +RD+ YV+D V AL Sbjct: 172 RSTVLRLTNTYGPCMRIKDARQTFVGIWIRLILEGKPFEVWG-GEQLRDFTYVDDCVAAL 230 Query: 234 YLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR-FIEDRPGHD 291 + + G YN+GGN+ V + L LI + ++R F +R D Sbjct: 231 LMAAANPKADGRVYNLGGNS-------VVSLRELAATLIAVHKGGSYVLREFPAERKKID 283 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 Y ++I+ E+GW P ++ GL ++ ++ Sbjct: 284 IGDYYSKDARIRGELGWRPTTSLAEGLKCSLAYF 317 >gi|187927054|ref|YP_001893399.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12J] gi|241665383|ref|YP_002983742.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12D] gi|187728808|gb|ACD29972.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12J] gi|240867410|gb|ACS65070.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12D] Length = 340 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 138/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D VL +D Y G ++ + F L+ D+ Sbjct: 24 RVLVTGGAGFLGSHLCDRLLRDGH-DVLCVDNF-YTGTKRNIAHLLSHPRFEVLRHDV-- 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G +L Sbjct: 80 -----TFPLYVEVDDIYNLACPASPIHYQHDPVQTTKTSVHGAINML----------GLA 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG + +E P S Y K ++ L + + +G Sbjct: 125 KRVGARILQASTSEVYGDPHQHPQTEAYWGNVNPIGVRSCYDEGKRCAETLFMDYRRQHG 184 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP P +++ I + + G + LYGDG R + YV+D + AL Sbjct: 185 LDVKVARIFNTYGPRMHPNDGRVVSNFIMQALAGEPITLYGDGLQTRAFCYVDDLIDALV 244 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ N+G +E +DI +I +S S +D P + Sbjct: 245 RLMNTPADFAGPVNLGNPHEMSMLDIARQI-----VTCTRSNSALVFHPLPQDDP---TQ 296 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + ++GW P +E GL +TV ++ Sbjct: 297 RCPDITLARDKLGWEPHTALEVGLARTVAYF 327 >gi|149195366|ref|ZP_01872452.1| putative udp-glucuronic acid epimerase [Caminibacter mediatlanticus TB-2] gi|149134498|gb|EDM22988.1| putative udp-glucuronic acid epimerase [Caminibacter mediatlanticus TB-2] Length = 348 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 53/359 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAG------NLNS 42 M++++TG AGFIG L L+ ND L +L AG N Sbjct: 1 MKILITGTAGFIGYHLANRLISRGDEVIGLDSINDYYDVNLKYGRLETAGINRDEIEYNK 60 Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 L E + + F+++++ DRE + ++ + D + + AA++ V S+ +I +N++ Sbjct: 61 LVESKKYPNYKFIKLNLEDRENLFKLFEKEKFDKVCHLAAQAGVRYSLTNPYAYIDSNVV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQ-ISTDEVYGSLDKGLFS-EDMPYNPSSPYSAT 160 G +LE R + + L S+ VYG K FS +D +P S Y+AT Sbjct: 121 GHMNILEAVR----------HNGVKALSYASSSSVYGLNKKQPFSTDDNVDHPISLYAAT 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + + Y IP YGP+ P+ + + ++E + +Y G+ Sbjct: 171 KKSNELMSHTYSYLYNIPTTGLRFFTVYGPWGRPDMALFKFVKNILEDKPIDVYNYGKMQ 230 Query: 221 RDWLYVEDHVRALYLVLK---------KGRIGER------YNIGGNNERKNIDIVFEIGF 265 RD+ Y++D V L V+ +G E YNIG + K +D + I Sbjct: 231 RDFTYIDDIVEGLVRVIDNPPKPNPNWEGNPSESIAPYKIYNIGNGSPVKLMDFIRAIEE 290 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +L K+ + +PG D++ ++ ++G+ P ++ G+ K + WY Sbjct: 291 ILGKEAKKN--------LMPIQPGDVPSTYADTTDLERDLGYKPYTPIKEGVAKFIEWY 341 >gi|330997138|ref|ZP_08320991.1| UDP-glucuronic acid decarboxylase 1 [Paraprevotella xylaniphila YIT 11841] gi|329570933|gb|EGG52640.1| UDP-glucuronic acid decarboxylase 1 [Paraprevotella xylaniphila YIT 11841] Length = 355 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 38/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +I+ GGAGFIGS LC YL++ +V+ +D G+ ++ ++ F ++ DI Sbjct: 37 VIIAGGAGFIGSHLCEYLLHKGD-RVICLDNFR-TGHPKNVSALTNHPYFKLVEHDITMP 94 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I+ D I N A + E T++IGT LLE R Sbjct: 95 YMIKGI------DEIYNLACPASPIHYQDSPIETTKTSVIGTLNLLELAR---------- 138 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPS---SPYSATKASSDYLVLAWGHTY 175 ++ RFLQ ST EVYG D + + Y NP+ S Y K ++ L + + Y Sbjct: 139 ENHCRFLQASTSEVYG--DPEVHPQPESYWGHVNPNGIRSCYDVGKRCAESLCMDYHRRY 196 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V + N YGP + +++ I + ++G + +YG+G R + YV+D ++ + Sbjct: 197 GVAVKIIRIFNTYGPRMACDDGRVVSNFILQALQGKDLTIYGNGMQTRSFQYVDDLIQGM 256 Query: 234 YLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ N+G E ++ I L S S D P + Sbjct: 257 ERIMSTPDSFTGPVNLGNPEEHTILEFAERILELTG-----SRSRMVFRPLPADDP---K 308 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + + + W P+ ++ GL +T+ +Y Sbjct: 309 RRNPDITLARQALDWHPRISLREGLQQTIAYY 340 >gi|328471816|gb|EGF42693.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus 10329] Length = 334 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 152/347 (43%), Gaps = 42/347 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS-QSNLFSFLQV 57 M+ +VTG AGFIGSA L N +V+ ID L Y NL + + LF F+ V Sbjct: 1 MKYLVTGAAGFIGSATAEKL-NAAGHEVVGIDNLNDYYDVNLKHARLARIEHPLFKFVSV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + + D +++ AA++ V S+ + +N++G +LE R Sbjct: 60 DIADRGAMEQLFATEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q K + + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 115 --QSKVNHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I +G + + +G RD+ +V+D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILDGETIDINNNGDMWRDFTHVDDIVEGVVR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + +D V I L K+ Sbjct: 230 IADVLPARNESWTVESGTPASSSAPYSVYNIGHGSPINLMDFVKAIEDELGIEAKKN--- 286 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E +PG + D+ + + G+ P+ ++ G+ + V WY Sbjct: 287 -----FREMQPGDVYQTYADTEDLFTVTGYKPRVTVKEGVAEFVSWY 328 >gi|307946054|ref|ZP_07661389.1| UDP-glucuronate 5'-epimerase [Roseibium sp. TrichSKD4] gi|307769718|gb|EFO28944.1| UDP-glucuronate 5'-epimerase [Roseibium sp. TrichSKD4] Length = 274 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 31/243 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS---FLQV-DI 59 +VTG AGFIGS LC+ L++D +V+ +D +T ++ LKE Q L F + D Sbjct: 5 LVTGSAGFIGSFLCQRLLDD-GFRVIGVDAMTDYYDVK-LKERRQQRLLQNEHFRAINDF 62 Query: 60 CDRECIRSALKEFQ-PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ++ + L + PD +V+ AA++ V SI ++ +NI GTF +LE R Sbjct: 63 IEKPGLMMELFASETPDVVVHLAAQAGVRYSIDNPRAYLESNICGTFEILEAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAW 171 L ST V+G+ + MPY + S Y+ATK +++ + ++ Sbjct: 117 ---THPPEHLLMASTSSVFGA------NTHMPYRETDKADHQMSFYAATKKATENMAHSY 167 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 + +G+PV + YGP+ P+ + P+ T+ I E + +Y G RD+ YVED V Sbjct: 168 AYLFGLPVTMFRFFTVYGPWGRPD-MAPIKFTKAILENKPIDVYNHGDMKRDFTYVEDLV 226 Query: 231 RAL 233 + Sbjct: 227 EGI 229 >gi|296170630|ref|ZP_06852206.1| NAD dependent epimerase/dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894721|gb|EFG74454.1| NAD dependent epimerase/dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 358 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/364 (24%), Positives = 155/364 (42%), Gaps = 63/364 (17%) Query: 3 LIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIGSAL LV D+ + ++ ++ AG + + + L D+ Sbjct: 5 VLITGGAGFIGSALSHRLVEAGYDVAVMDILHPQVHGAG-----RPLDLPSSVRLLTGDV 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L+ +P IV+ AAE+ +S+ A + N++GT LL+ LS Sbjct: 60 THAPDWDAVLRLCRPSQIVHLAAETGTAQSLSEATRHGSVNVVGTTQLLD-------ALS 112 Query: 120 QDKKDQFRFLQISTDEVYG-------------------SLDKGLFSEDMPYN-PSSP--- 156 + + + S+ VYG L G + P P++P Sbjct: 113 RSGIVPDQLVLASSRAVYGEGAWQAGDDIFYPPPRSHAQLVAGQWDPQGPAGEPAAPLPS 172 Query: 157 ------------YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP----YHFPEKLIPL 200 Y+ATK + ++L+ AW + + + N YGP + ++ L Sbjct: 173 CASTTEPRPTNVYAATKLAQEHLLAAWTAAHDTNLSVLRLQNVYGPGQSLTNAYTGIVAL 232 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGE-RYNIGGNNERKNIDI 259 EG + +Y DG+ VRD++Y++D V AL+ LK+ G R ++G + + Sbjct: 233 FARLAREGQSLEVYEDGRIVRDFVYIDDVVEALFAALKRAATGSRRLDVGSGDATTIHQL 292 Query: 260 VFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 ++ L DA P T + +F R G R + D +E+ W P+ ++ GL Sbjct: 293 ADKVAALCDAPDP-----TVVPKF---RDGDVRAASCDIRPAGTELDWRPKWTLDEGLPA 344 Query: 320 TVCW 323 + W Sbjct: 345 LLEW 348 >gi|195953980|ref|YP_002122270.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933592|gb|ACG58292.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 313 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ + +V+ +D + G+ ++K + + F L+ DI Sbjct: 4 RILITGGAGFIGSHLCERLLEEGN-EVICVDNF-FTGSKENIKHLLGNPYFEVLRHDITF 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 62 PLYV-------EVDEIYNLACPASPIHYQFDPVQTTKTSVMGAI----------NMLGLA 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG ED P P + Y K ++ L + + Sbjct: 105 KRLKIRILQASTSEVYGDPTVHPQKEDYWGNVNPIGPRACYDEGKRCAETLFFDYHRQHN 164 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + ++G + +YGDG R + Y++D V + Sbjct: 165 LDIKVVRIFNTYGPRMLPNDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYIDDMVDGII 224 Query: 235 LVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ KG G N+G E + E+ ++ L KS S +D P + Sbjct: 225 KMMNSPKGFTGP-VNLGNPGEFS----ILELAEMILKLT-KSKSKIVFKPLPQDDP---K 275 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + KS + W P+ ++ GL KT+ ++ Sbjct: 276 QRQPDITLAKSRLNWEPKVPLQEGLIKTIEYF 307 >gi|86144015|ref|ZP_01062353.1| putative dNTP-hexose dehydratase-epimerase [Leeuwenhoekiella blandensis MED217] gi|85829475|gb|EAQ47939.1| putative dNTP-hexose dehydratase-epimerase [Leeuwenhoekiella blandensis MED217] Length = 316 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 40/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC+ L+ D +VL +D + GN ++ + + F ++ DI + Sbjct: 3 RILVTGGAGFIGSHLCKQLLQDGN-EVLCLDNY-FTGNKENIVPLLTNPYFELIRHDITE 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 D I N A + + + T+++G + L Sbjct: 61 PYYAEV-------DEIYNLACPASPVHYQYNPIKTVKTSVMGAI----------NMLGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-------PYNPSSPYSATKASSDYLVLAWGHT 174 K+ + + LQ ST EVYG D + + P P S Y K ++ L + + Sbjct: 104 KRVKAKILQASTSEVYG--DPAVHPQPESYWGHVNPIGPRSCYDEGKRCAETLFMDYHTQ 161 Query: 175 YGIPVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ + ++ N YGP+ +++ I + +EG ++ ++GDG R + YV+D V Sbjct: 162 NGVAIKIARIFNTYGPHMNIHDGRVVSNFIVQALEGKNLTIFGDGSQTRSFQYVDDLVTG 221 Query: 233 LYLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L ++ ++ N+G +E + + I LD + S S +D P Sbjct: 222 LTALMGTDVQVTGPVNLGNPHECTMLQLAASI---LD--LTGSSSKLVFQPLPQDDP-QQ 275 Query: 292 RRYAIDSSKIKSEI-GWFPQENMESGLNKTVCWY 324 RR I SK + + GW PQ + GL +T+ ++ Sbjct: 276 RRPEI--SKARELLNGWQPQTGLREGLTETITYF 307 >gi|209963580|ref|YP_002296495.1| capsular polysaccharide biosynthesis protein I, putative [Rhodospirillum centenum SW] gi|209957046|gb|ACI97682.1| capsular polysaccharide biosynthesis protein I, putative [Rhodospirillum centenum SW] Length = 328 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 32/338 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQ 56 M+++VTG AGFIG L + L+ D V+ +D L + A + L + Q F F Sbjct: 3 MKVLVTGVAGFIGFHLAQALL-DRGDTVVGVDNLNDYYSTALKQDRLALLRQREGFHFQH 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESH--VDRSILGADEFITTNIIGTFILLEETRLW 114 ++I DR+ + +AL PD + V S+ ++ +N++G ++LE R + Sbjct: 62 LNIADRDGM-AALAAAHPDTAAIAHLAAQAGVRYSLTDPFAYVESNLMGHVVMLETARRF 120 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 + S+ VYG + FS +D P+S Y ATK + + + ++ H Sbjct: 121 EGLR--------HLVYASSSSVYGLSEAHPFSLDDRADRPASLYGATKRADELISHSYSH 172 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP YGP+ P+ + L ++ G + L+ G+ RD+ Y++D + + Sbjct: 173 IHRIPQTGLRFFTVYGPWGRPDMALFLFTRAILAGEPIELFNHGRLQRDFTYIDDIIAGV 232 Query: 234 YLVLKK------GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 L + G + R +N+G N +++ + L DAL K+ H + Sbjct: 233 VRALDRPPPVVEGAVPHRVFNLGNNTP---VELERFVAVLEDALGLKARRHLAPM----- 284 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D + + +G+ P +E+G+ + V WY Sbjct: 285 QPGDVLSTHADIEESRRVLGFEPSTPIEAGIGRFVDWY 322 >gi|284989063|ref|YP_003407617.1| NAD-dependent epimerase/dehydratase [Geodermatophilus obscurus DSM 43160] gi|284062308|gb|ADB73246.1| NAD-dependent epimerase/dehydratase [Geodermatophilus obscurus DSM 43160] Length = 325 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 141/330 (42%), Gaps = 33/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC +L+ + ++V+ +D G+ ++ + + F ++ D+ D Sbjct: 10 RAVVTGGAGFLGSHLCEHLL-ERGVEVVCLDNF-LTGSPQNVVHLMEHPGFRLVRCDVTD 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++FA+ + + E + +GT L L+ + Sbjct: 68 FVHVPGDV-----DLVLHFASPASPLDYLRMPIETLKVGSLGTLHTL--------GLAHE 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K R++ ST EVYG +E+ P P Y K S+ + A+ + G Sbjct: 115 KG--ARYVLASTSEVYGDPLVHPQTEEYWGNVNPVGPRGVYDEAKRFSEAMTTAYRTSKG 172 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP P+ + IP + + + G + + GDG R YV+D VR + Sbjct: 173 TDTGIVRIFNTYGPRMRPDDGRAIPAFVGQALAGRPLTVAGDGSQTRSICYVDDTVRGIL 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G G NIG +E + + I L S S I D P R Sbjct: 233 AMAFSGEAGP-VNIGNPDELSMLRLAEWIVELT-----GSSSEISFIDLPVDDPKVRRP- 285 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+++ + +GW P E GL TV W+ Sbjct: 286 --DTTRAEQLLGWRPTVPSEEGLRSTVAWF 313 >gi|34766456|gb|AAQ82569.1| FscMIII [Streptomyces sp. FR-008] Length = 402 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 31/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 R ++TG G GS L +L+ D QV + + G N K+ + SF+ D+ Sbjct: 62 RALITGITGQDGSYLAEHLL-DQGYQVWGLCR----GQANPRKDRIAKLIPELSFVDGDL 116 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ QPD + N A S V S + N G +LE R+ S L+ Sbjct: 117 MDQGSLVSAVDLVQPDEVYNLGAISFVPMSWQQPELVTEVNGTGVLRMLEAVRIV-SGLT 175 Query: 120 QDK----KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + Q RF Q S+ E+YG + + E ++P SPY KA Y+ + +Y Sbjct: 176 KSSGGSPRGQIRFYQASSSEMYGKVAESPQRETTSFHPRSPYGVAKAFGHYITQNYRESY 235 Query: 176 GI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 G+ +L ++ S G F + I LA+ ++ G L+ G+ RDW + D+V Sbjct: 236 GMYGVSGILFNHESPRRGA-EFVTRKISLAVAQIKLGQMDKLHLGNLDAERDWGFAGDYV 294 Query: 231 RALYLVLKKGRIGERYNIGG---NNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIED 286 RA++L+L++ + G+ Y +G + R I FE +G + ++ Sbjct: 295 RAMHLMLQQEQAGD-YVVGTGAMHQVRDAARIAFEHVGL--------DWQEHVVVDPGLV 345 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP DS + E+GW P+ + E Sbjct: 346 RPAEVETLCADSGNARRELGWEPEVDFE 373 >gi|56707902|ref|YP_169798.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670373|ref|YP_666930.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC198] gi|224456984|ref|ZP_03665457.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370393|ref|ZP_04986398.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC033] gi|254874711|ref|ZP_05247421.1| galactose epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|23506389|gb|AAN37772.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506391|gb|AAN37773.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506393|gb|AAN37774.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506395|gb|AAN37775.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506397|gb|AAN37776.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506399|gb|AAN37777.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506401|gb|AAN37778.1| galactose epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|23506403|gb|AAN37779.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506405|gb|AAN37780.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506407|gb|AAN37781.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506409|gb|AAN37782.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506411|gb|AAN37783.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506413|gb|AAN37784.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506415|gb|AAN37785.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506417|gb|AAN37786.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|23506419|gb|AAN37787.1| galactose epimerase [Francisella tularensis subsp. tularensis] gi|56604394|emb|CAG45424.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320706|emb|CAL08807.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC198] gi|151568636|gb|EDN34290.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis FSC033] gi|254840710|gb|EET19146.1| galactose epimerase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159087|gb|ADA78478.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis NE061598] Length = 339 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKVSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + +E+ A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LGKAKLTKVFQEYDIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K + F+ S+ VYG +K F+EDMP + ++PY ATK + ++ Sbjct: 114 QEYK-VYNFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATKLMLEDILRD--------- 163 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 164 -LQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKAKRELGFETQKTIDDICDDMLKW 330 >gi|162454969|ref|YP_001617336.1| dTDP-glucose 4,6-dehydratase [Sorangium cellulosum 'So ce 56'] gi|161165551|emb|CAN96856.1| dTDP-glucose 4,6-dehydratase [Sorangium cellulosum 'So ce 56'] Length = 312 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 40/333 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D V+ +D + G +L + ++ F + D+ Sbjct: 6 RILVTGGAGFLGSHLCARLLADGH-HVICVDSMV-TGRDENLGPLLKNPRFELHRCDVS- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R F+ D I N A + + + TN+ G +L L+Q+ Sbjct: 63 -EPLR-----FEVDQIYNMACAASPVKYRADPVHTLNTNVFGAINVLR--------LAQE 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 R LQ ST EVYG ED P P + Y +K ++ + T Sbjct: 109 LG--ARVLQASTSEVYGDALVHPQHEDYWGNVNPIGPRACYDESKRVAETYFWEYRQTRN 166 Query: 177 IPVLLSNCSNNYGPY--HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + ++ N YGP ++I + + + G + LYG G R + +V D + L Sbjct: 167 VDTVIVRIFNTYGPNMDRNDGRVIANFVVKALRGEALELYGGGHRTRSFCFVSDLIEGLV 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI---RFIEDRPGHD 291 V+ + N+G E + D L + +I K+ +L I+D Sbjct: 227 RVMNAKDLTGPVNLGNPAETRMQD-------LAELIIRKTGGRAKLTMSDALIDD----P 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D S+ +GW P +++SGL++T+ W+ Sbjct: 276 QRRRPDISRATELLGWRPVVDLDSGLDRTIDWF 308 >gi|159900414|ref|YP_001546661.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893453|gb|ABX06533.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 329 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 37/336 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R ++TGG GFIGS L LV +L +V+++D L Y GN+ ++ +++ + D+ Sbjct: 10 RCLITGGLGFIGSNLAFRLV-ELGAEVVIVDSLVAEYGGNMANVHGLAEQVRINI--ADV 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+ ++ ++ D + N A + SH+D S+ + N +LE R Sbjct: 67 RDQHSLQYLVQG--QDYLFNLAGQVSHID-SMENPFNDLDINCRAQLSILEACR------ 117 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ST ++YG D E +P+ K + ++ + + + YGI Sbjct: 118 --HNNPAIKIVFASTRQIYGRPDYVPVDEQHLLHPTDVNGINKMAGEWYHILYNNVYGIR 175 Query: 179 VLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N YGP H + + + + ++ + +YGDG+ RD+ YV+D V A Sbjct: 176 ACALRMTNTYGPRMLVRHARQTALGWFVRQALDNEVISIYGDGEQQRDYTYVDDAVEAFL 235 Query: 235 L-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + G+ +N+GG ++ + I L + SY L+ F P R Sbjct: 236 LAAMNPAADGQVFNLGGPEPISHLQL---ISTLTEVAGTGSY---RLVPF----PPEKAR 285 Query: 294 YAI-----DSSKIKSEIGWFPQENMESGLNKTVCWY 324 I D S+I++ +GW P ++ GL TV +Y Sbjct: 286 IDIGSVYSDYSRIQAVLGWQPTTSLRQGLEYTVNFY 321 >gi|254412080|ref|ZP_05025855.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] gi|196181046|gb|EDX76035.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] Length = 334 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 41/346 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 + ++VTG AGFIG L + L+ V+ +D L ++ SLK+ + L F F Sbjct: 2 VNVLVTGAAGFIGYHLSQRLLAQGDT-VIGLDNLNAYYDV-SLKQARLAQLENQPGFRFY 59 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ DRE I + + +++ AA++ V S+ ++ +N++G +LE Sbjct: 60 KLDLADREGIAQLFAQESFEFVIHLAAQAGVRYSLKNPYAYVDSNLVGFTNILE------ 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C D K + S+ VYG+ K FS +D +P S Y+ATK +++ + A+ H Sbjct: 114 GCRHSDIK---HLVFASSSSVYGANTKVPFSVQDNVDSPVSLYAATKKANELMAHAYSHL 170 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y IP YG ++ P+ + L ++ + ++ G+ RD+ YV+D V + Sbjct: 171 YNIPTTGLRFFTVYGSWYRPDMALFLFTKAILAEQPINVFNYGRMQRDFTYVDDVVEGVV 230 Query: 235 LVLKK---------GRIGER-------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 V+ K G R YNIG N E+ L++ L + T Sbjct: 231 RVMGKIPPPKASGNTSPGSRSSAPYKLYNIGNNQP-------IELLQLIETL-EQCLGKT 282 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + ++G+ P +E G+ + V WY Sbjct: 283 AVKNMLPMQPGDVPITYADVDDLMQDVGFKPNTPIEVGVERFVQWY 328 >gi|218510377|ref|ZP_03508255.1| putative UDP-glucuronate 5'-epimerase [Rhizobium etli Brasil 5] Length = 344 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 45/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-----L 55 MR +TG AGFIG L R L+ D +V+ D +T+ N+ LK + + L F + Sbjct: 1 MRYFITGTAGFIGFHLARRLLQDGH-EVVGFDGMTHYYNIK-LKHMRNAALAQFPAFRPV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DR + A+ + D +V+ AA++ V S+ ++ +N+ G+ W Sbjct: 59 TAMLEDRNALEKAVAIAKADVMVHLAAQAGVRYSLENPKAYLISNLEGS----------W 108 Query: 116 SCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + L K L + ST +YG+ F E D P + Y+ATK S + + ++ H Sbjct: 109 NILEIAKDVGVNHLMLASTSSIYGANPTVPFRETDRADEPLTFYAATKKSMELMAHSYAH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + IP YGP+ P+ + + M+E + +YG+G+ RD+ Y++D V A+ Sbjct: 169 LHKIPTTAFRFFTVYGPWGRPDMALFKFVKNMLEDQPIEIYGEGKMSRDFTYIDDLVEAI 228 Query: 234 -----YLVLKKGRIGER-------------YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + + RI + NIGG + V + K+ Sbjct: 229 VRLSSVIPSEANRISDEGVETLSHQAPYRVVNIGGGQPESLMTFV--------ETVEKAL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G R + + G+ P+ ++ G+ WYL+ Sbjct: 281 GQPAKRKMLPMQKGDVPRTFASPDLLVALTGYKPETTLDVGVKAFADWYLE 331 >gi|221632914|ref|YP_002522136.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Thermomicrobium roseum DSM 5159] gi|221155977|gb|ACM05104.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Thermomicrobium roseum DSM 5159] Length = 333 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 62/359 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN-----LNSLKEISQSNLFSFLQ 56 R ++TG GF G RYL D+L G+ L++ S+L L Sbjct: 3 RALITGATGFAG----RYLA----------DRLAATGHWEVIGLSARPSPPASSLKQHLV 48 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ + E +R L + P+ I + AA S+V RS I N++G LLE R Sbjct: 49 CDLMNGELVRRTLAHWHPEVIFHLAAVSYVPRSFQDPYGTIANNVLGQVNLLEAVR---- 104 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + +S+ + YG + + +E P+ P SPY +KA+ D L L + T Sbjct: 105 ----SLEPPPLVVIVSSSDAYGLVYEHELPVTESQPFRPLSPYGVSKATQDLLGLQYHLT 160 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH------VFLYGDGQNVRDWLYVED 228 YG+P++ + GP E+ R I + V L G+ RD L V D Sbjct: 161 YGLPIVRVRPFTHIGPGQS-ERFALSGFARQIAEAELGMAPPVLLVGELDVERDLLDVRD 219 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VRA L+ + GE +N+ + + L AL+ + S + +E P Sbjct: 220 VVRAYELLAEPRFSGEVFNLASG-----------VSWSLRALVERLLSLARIPLRLERDP 268 Query: 289 GHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDN 342 R + D++ +++ GW P +E L D +WR + L+P Sbjct: 269 ARLRPIDVRVLRGDATALRTATGWQPTIPIEQTLE-------DMLEYWR---RTLRPSR 317 >gi|332703438|ref|ZP_08423526.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] gi|332553587|gb|EGJ50631.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] Length = 326 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 150/353 (42%), Gaps = 59/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS C+ L + V+V+D L Y +E ++ F+ DI D Sbjct: 7 VLVVGGAGYIGSHACKEL-HRRGYDVVVLDNLVYGH-----REFAKWG--EFVLGDIADP 58 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ K + A+++FAA ++V S+ ++ N+ T LL+ R DK Sbjct: 59 LQLKLVFKTYPIKAVMHFAAFAYVGESVTDPQKYYLNNVAYTLNLLQAMR----GAGVDK 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YG+ ED P P +PY K + ++ + YG + Sbjct: 115 -----LIFSSTCATYGNPQVIPIPEDHPQAPINPYGRGKLMVENIMADYAQAYGFKYVSL 169 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH-VFLYG------DGQNVRDWLYV 226 ++ G +H PE LIPL + +E + ++G DG +RD+++V Sbjct: 170 RYFNAAGADPEAEVGEWHDPETHLIPLVLRAALEPDKPIKIFGTDYDTPDGTCIRDYIHV 229 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 D H+ AL +L G G +N+G G+ + +I + T I Sbjct: 230 TDLADAHILALEYLLA-GEKGGVFNLGNGQ-----------GYSVREIIETTRQVTGRAI 277 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 IED RPG R S++IKSE GW PQ N + L W W Sbjct: 278 PVIEDKRRPGDPARLVGSSARIKSEFGWKPQ-------NIEIERILSTAWKWH 323 >gi|32472697|ref|NP_865691.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica SH 1] gi|32443934|emb|CAD73376.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica SH 1] Length = 336 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 39/342 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV+D V+ +D + N + + + N F ++ DI Sbjct: 18 RILVTGGAGFLGSHLCERLVSDGH-DVICLDNFFTSQKTNVVHLLDKPN-FELIRHDI-- 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T+++G+ + L Sbjct: 74 -----TLPIHLEVDQIYNMACPAAPGHYQFNPIKTIKTSVMGSI----------NMLGIA 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG ++ +E P + Y K ++ L + + + Sbjct: 119 KRCGARILQASTSEVYGDPEQHPQTESYRGSVNPIGIRACYDEGKRVAETLFMDYHRSNN 178 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP + F +++ I + + G + ++GDG R + Y +D V + Sbjct: 179 VDVRIVRIFNTYGPRMHPFDGRVVANFIRQALAGDDITIFGDGSQTRSFCYRDDLVEVII 238 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ G IG NIG +E F I L + I + S ++LI P D Sbjct: 239 RMMNCDGFIGP-VNIGNPHE-------FTIRQLAEKTIELTGSSSKLIE--APLPADDPT 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW-WRP 333 R D + K ++ W P+ +E GL T+ W+ N +RP Sbjct: 289 RRRPDIALAKEKLDWEPKIELEQGLKHTIDWFKTINLGDYRP 330 >gi|163814680|ref|ZP_02206069.1| hypothetical protein COPEUT_00831 [Coprococcus eutactus ATCC 27759] gi|158450315|gb|EDP27310.1| hypothetical protein COPEUT_00831 [Coprococcus eutactus ATCC 27759] Length = 338 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 154/353 (43%), Gaps = 73/353 (20%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M+++VTGGAG+IGS C L+N V+VID L A ++ +KEI+ ++ +F + D Sbjct: 1 MKILVTGGAGYIGSHTCVELLN-AGYDVVVIDNLYNASEKAIDRIKEITGKDV-TFYETD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+E + E +PD +++FA V S++ E+ NI GT L E R Sbjct: 59 ILDKEAMDKIFAEEKPDCVIHFAGLKAVGESVVKPLEYYQNNITGTLNLCEVMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG+ +E+ P P++PY TK + ++ HT Sbjct: 113 ---KNGCKNIIFSSSATVYGNPAFIPITEECPKGTPTNPYGWTKWMIEQILTDL-HTADP 168 Query: 178 P--VLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQ 218 V+L N G P P L+P +A + + V ++G DG Sbjct: 169 EWNVILLRYFNPIGAHKSGLIGEDPKGIPNNLLPYVAQVAIGKLQSVGVFGDDYDTPDGT 228 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV+A+ + + + + YN+G K Sbjct: 229 GVRDYIHVVDLAVGHVKAVNKIKENPGV-KVYNLGTG---------------------KG 266 Query: 275 YSHTELIRFIEDRPGHDRRYAI-------------DSSKIKSEIGWFPQENME 314 YS ++I+ GHD Y I D+S K E+GW Q +++ Sbjct: 267 YSVLDVIKAFSKACGHDVPYVIKERRAGDIATCYSDASLAKKELGWEAQYDID 319 >gi|241258858|ref|YP_002978742.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863328|gb|ACS60991.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 363 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 34/286 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 67 DMTDSTNLIRVVQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 123 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 181 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQERLYLGNLDAKRDWGHAREYVRG 239 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----ALIPKSYSHTEL 280 ++L+L++ GE +++ R +D F ++G +D + K Y T Sbjct: 240 MWLMLQQDEPEDYVLATGETHSV-----RSFVDKAFAQVGMPIDWRGNGVEEKGYDKTSG 294 Query: 281 IRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTV 321 +E P + R + D +K +++GW + +++ + + V Sbjct: 295 QCVVEIDPAYFRPTEVDLLIGDPTKAHTKLGWKHETSLDQLIAEMV 340 >gi|170726010|ref|YP_001760036.1| NAD-dependent epimerase/dehydratase [Shewanella woodyi ATCC 51908] gi|169811357|gb|ACA85941.1| NAD-dependent epimerase/dehydratase [Shewanella woodyi ATCC 51908] Length = 342 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 26/333 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEI---SQSNLFSFLQVDI 59 +VTG AGFIGS L L+ + V + + T + NL+ +K + Q F+F++ DI Sbjct: 19 LVTGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVKSLVTEEQWERFTFIEGDI 78 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++K D +++ AA V RSI TNI G +L+ + Sbjct: 79 RDYSTCEESVKGV--DYVLHQAALGSVPRSIADPITSNATNITGFLNMLQVAKAA----- 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + F + S+ YG ED NP SPY+ TK ++ + TYG Sbjct: 132 --KVESFTYAASSS--TYGDHPALPKVEDNIGNPLSPYAVTKYVNELYANVFAKTYGFKT 187 Query: 180 LLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N +G P +IP + MI+G +F+ GDG+ RD+ ++E+ V+ L Sbjct: 188 IGLRYFNVFGQRQDPNGAYAAVIPKWASAMIQGDEIFINGDGETSRDFCFIENTVQMNLL 247 Query: 236 VLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTELIRFIEDRPGHDR 292 I E YN+ + D+ I L+ KS S ++ + R G R Sbjct: 248 AATSEDIAKDEVYNVAVGDRTTLNDLFTNIQSSLN----KSGSIYSIAPSYRAFRNGDVR 303 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D SK K ++G+ P+ N+ G+ K + WYL Sbjct: 304 HSQADISKAKQKLGYSPEFNISQGIAKAMPWYL 336 >gi|227488739|ref|ZP_03919055.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091161|gb|EEI26473.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] Length = 325 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 44/326 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + V ++D + GN +++ + ++ D+ Sbjct: 1 MKLVVTGGAGYVGS-VCTAVLIEAGHDVTIVDNFS-TGNRDAVHPDAH-----LVEGDV- 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R+ I L D +++FAA S V S+ E+ N++ T LL+ + Sbjct: 53 -RDVIDDVLSADSYDGVLHFAARSLVGESVEKPAEYWNHNMVTTLTLLD---------AM 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST YG + +ED P P++PY ATK + DY + ++ YG+ Sbjct: 103 VAHDVSSLVFSSTAATYGEPETVPITEDFPTQPTNPYGATKLAIDYAISSYCTAYGLAAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 N G Y LIPL I ++ G+ + ++G DG VRD+++ Sbjct: 163 SLRYFNVAGAYGSIGENREIETHLIPL-ILQVPLGARKDIKIFGDNWPTKDGTCVRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 + D A L L + YN+G + +++ + IP + Sbjct: 222 IRDLADAHVLALTSNQPSTHRIYNLGSGDGYSVKEVIEACREVTGHPIPAEVA------- 274 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S KIK E+GW P Sbjct: 275 -PRRAGDPAVLVASSEKIKQELGWNP 299 >gi|41409346|ref|NP_962182.1| hypothetical protein MAP3248 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398166|gb|AAS05796.1| hypothetical protein MAP_3248 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 358 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 139/337 (41%), Gaps = 40/337 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+G+ LC L++D ++V+ +D L+ +G + + F+Q D+C+ Sbjct: 31 RVLITGGAGFLGAHLCARLLDD-GVEVVSVDDLSTSGPAVRFGDRPG---YRFVQRDVCE 86 Query: 62 RECIRSALKEFQPDAIVNFA-AESHVD---RSILGADEFITTNIIGTFILLEETRLWWSC 117 I F DA+ + A A S VD R I + + T GT LE Sbjct: 87 PGLIDEVGSGF--DAVFHLASAASPVDYQRRPI----QTLCTGSAGTATALEIA------ 134 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWG 172 ++ RF+ ST EVYG + E P P S Y K ++ L A+ Sbjct: 135 ----ERAGARFVLASTSEVYGDPESHPQRESYWGNVNPAGPRSVYDEAKRFAEALTFAYH 190 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 V + N YGP + +++P + + G + + G G R YV+D + Sbjct: 191 RLGRADVGAARIFNTYGPGMRADDGRMVPTFCLQALRGDPLTVSGTGLQTRSLCYVDDTI 250 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L + L NIG E + LI + T I+F Sbjct: 251 TGL-IALAHSDFAGPVNIGNPTELTVLSAA--------ELIRELAGSTSTIQFTPPAADD 301 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +R D + +GW P+ + +GL+ T+ W+ + Sbjct: 302 PQRRCPDIRLARKRLGWRPRVDYRTGLSTTLAWFAER 338 >gi|227498816|ref|ZP_03928956.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] gi|226904268|gb|EEH90186.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] Length = 315 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 38/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIG+ RYL+ V V+D L+ GN L + F +DI Sbjct: 1 MNVLVTGGAGFIGNHTVRYLIEK-GYDVTVVDDLSR-GNAGLLPLEAH-----FYPIDIL 53 Query: 61 DRECIRSALKEFQP----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + +EF DA+++ AA+ V S + NI GT +LE R Sbjct: 54 TPQ-----FQEFMAARHFDAVIHLAAQIEVASSERDPLRDASLNIGGTLAVLEGAR---- 104 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGL--FSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K RF+ S+ VYG + L +E+ P P SPY +K +++ + + Sbjct: 105 -----KAHVSRFVFASSAAVYGHPSEALLPLAEEAPLCPLSPYGLSKVTAENYIRMLAPS 159 Query: 175 YGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + + ++ +N YG P +I + ++ + L+G RDW+YV D Sbjct: 160 FSMEWVILRFANVYGEREVRKDPGGVIQIFANQIARHRPITLFGATDPTRDWIYVRDVAE 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 AL L R YNI E ++ V +L+ S H + + R G Sbjct: 220 ALAKSLVTIRGDAVYNISTGKE-VSLKTVLA---MLERTAGYSVPHEQGPK----RYGDI 271 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + +K ++ + W P+ +E GL +T + D Sbjct: 272 HRSVLSCAKARTLLAWIPKMTLEEGLFRTFRFAQDQ 307 >gi|90418005|ref|ZP_01225917.1| NAD dependent epimerase hydratase [Aurantimonas manganoxydans SI85-9A1] gi|90337677|gb|EAS51328.1| NAD dependent epimerase hydratase [Aurantimonas manganoxydans SI85-9A1] Length = 336 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 53/352 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+++TG AGFIG L + L+++ V D +T Y L + + Q+ F+ + Sbjct: 3 RILITGTAGFIGFHLAKLLLSE-GFVVHGYDGITDYYDVRLKQRRHQMLLQNANFAATEG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D+ +F PD IV+ AA++ V S+ ++ +N+IGTF ++E R Sbjct: 62 MLEDQALFVQVADDFAPDVIVHLAAQAGVRYSLENPRAYLDSNVIGTFNVMETAR----- 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + L ST VYG+ + DMP+ + + Y+ATK +++ + A Sbjct: 117 ----RLRVQHLLMASTSSVYGA------NTDMPFVETERADTQLTIYAATKKANESMGHA 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H + +P + YGP+ P+ + + +++G + +Y G RD+ YV+D V Sbjct: 167 YAHLHDLPTTMFRFFTVYGPWGRPDLALYKFVDAILDGRPIDIYNHGDMYRDFTYVDDLV 226 Query: 231 RALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIP 272 RA+ L++ + NIG +++ + +D V I L Sbjct: 227 RAIRLLMDAVPVRTADGVVPDGDSLSPVAPYRVVNIGNSDKVRLLDFVDAIEECLGQKAS 286 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++Y + D P ++ +K G+ PQ + G+ + V WY Sbjct: 287 RNYMGMQ----TGDVPAT----WANAELLKKLTGYRPQTDFRVGIARFVDWY 330 >gi|116669787|ref|YP_830720.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] gi|116609896|gb|ABK02620.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] Length = 354 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ +TGGAGFIGS L +L+ +V V+D L+ G L +L+ + F F++ I Sbjct: 20 VKTAITGGAGFIGSHLVEHLLAAGD-KVTVLDDLS-TGRLENLRTVIGHRDFHFVEGTIL 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + D + + AA V+ + E + TNI GT ++L+ + L Sbjct: 78 DRAAVDKVVA--GADRVFHLAAAVGVNLIVEHPLESLRTNIHGTEVVLDAVLESGASL-- 133 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHT 174 L ST E+YG SE+ S Y+A K + A+ Sbjct: 134 --------LLASTSEIYGKNTSDSLSEESDRILGSALKSRWTYAAAKGIDEAFAHAYWRQ 185 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+PV + N GP ++P + + + G + +YGDG R + YV D V A Sbjct: 186 FGLPVAIVRLFNTVGPRQTGRYGMVVPRLVKQALAGEPLTVYGDGHQTRCFSYVGDIVPA 245 Query: 233 LYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-----LIPKSYSHTELIRFIED 286 + + +K G YN+GG+ E + + I LL + L+P ++ E ED Sbjct: 246 ITRISEEKSAYGNAYNLGGSYEISILTLAQRIVELLGSESPITLVPYEEAYAE---GYED 302 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RR ++SK K +G+ P+ ++ Sbjct: 303 M----RRRVPNNSKAKDLVGFDPKTTLD 326 >gi|86609385|ref|YP_478147.1| NAD-dependent epimerase/dehydratase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557927|gb|ABD02884.1| NAD-dependent epimerase/dehydratase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 315 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 30/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG GFIGS L L+ + V+ +D Y G +++ + F + D+ Sbjct: 1 MKILVTGGLGFIGSHLVTRLLQEGHW-VICLDN-GYTGRQLNVQAHLDNPAFQLIWHDVA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + AL E I + A + I T++ GT+ LL+ L+Q Sbjct: 59 D--PLPPALAEAGIQQIYHLACPASPPHYQADPIRTIRTSLWGTYHLLQ--------LAQ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST EVYG ED P P + Y +K ++ L W Y Sbjct: 109 --KTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQY 166 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + ++ N YGP + +++ I + + G + +YGDG R + Y+ D V L Sbjct: 167 QTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGDPLTVYGDGSQTRSFCYISDLVEGL 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G +N+G E +++ ++ L + P Y D P R+ Sbjct: 227 IRLMNSPYPGP-FNLGNPEEFTILELAQQVLALTGSPSPIVYR-----PLPTDDP---RQ 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K ++ +GW P+ ++ GL +T+ ++ Sbjct: 278 RQPDIGKARALLGWEPRIPLQVGLQQTIPYF 308 >gi|163740038|ref|ZP_02147442.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] gi|161386669|gb|EDQ11034.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] Length = 336 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 24/334 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 ++TG AGFIG L L+ +V+ +D L+ ++ LKE + L F+ + Sbjct: 5 LITGSAGFIGYHLADRLLA-AGWRVIGLDCLSPYYDVR-LKECRHARLAEYAGFTPIIGK 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + + +PDA+++ AA++ V SI +++ N+IGTF LLE R Sbjct: 63 LEDPDRLMGLFATHKPDAVIHLAAQAGVRHSIDAPRDYLEANLIGTFELLEAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYGI 177 L ST YG+ + F E + S Y+ATK + + + ++ H YG+ Sbjct: 117 ---AHPPAHMLIASTSSAYGANTQMPFDERQQADHQMSFYAATKKAGETMAHSYAHLYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY--- 234 P + YGP+ P+ + M G + +Y G+ RD+ Y++D V + Sbjct: 174 PTTMFRFFTVYGPWGRPDMALFKFTQAMQAGQPIDVYNHGRMSRDFTYIDDLVAGITGLI 233 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDI-VFEIGFLLD--ALIPKSYSHTELIRFIEDRPGH 290 V + E+ N+ + ++I L++ A + + T +E +PG Sbjct: 234 DAVPGDQPVSEQDNLSPVAPFRVVNIGASRPTPLMEYIAALETALGITAQKNLMEMQPGD 293 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S + G+ PQ +E G+ + V WY Sbjct: 294 VPATWADTSLLNQLTGYEPQVPVEEGVARFVTWY 327 >gi|15607254|ref|NP_214626.1| GDP-mannose 4,6-dehydratase [Mycobacterium tuberculosis H37Rv] gi|15839493|ref|NP_334530.1| GDP-D-mannose dehydratase, putative [Mycobacterium tuberculosis CDC1551] gi|31791290|ref|NP_853783.1| GDP-mannose 4,6-dehydratase [Mycobacterium bovis AF2122/97] gi|121636025|ref|YP_976248.1| putative GDP-mannose 4,6-dehydratase gca [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659875|ref|YP_001281398.1| putative GDP-D-mannose dehydratase [Mycobacterium tuberculosis H37Ra] gi|148821304|ref|YP_001286058.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis F11] gi|215413969|ref|ZP_03422631.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis 94_M4241A] gi|215425313|ref|ZP_03423232.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T92] gi|215433029|ref|ZP_03430948.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis EAS054] gi|215448388|ref|ZP_03435140.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T85] gi|218755840|ref|ZP_03534636.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis GM 1503] gi|219555899|ref|ZP_03534975.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T17] gi|224988498|ref|YP_002643185.1| putative gdp-mannose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253797030|ref|YP_003030031.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 1435] gi|254233505|ref|ZP_04926831.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis C] gi|254366567|ref|ZP_04982611.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis str. Haarlem] gi|254549046|ref|ZP_05139493.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260199107|ref|ZP_05766598.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T46] gi|289441481|ref|ZP_06431225.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T46] gi|289552363|ref|ZP_06441573.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 605] gi|289568005|ref|ZP_06448232.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T17] gi|289748585|ref|ZP_06507963.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T92] gi|289756174|ref|ZP_06515552.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis EAS054] gi|289760212|ref|ZP_06519590.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T85] gi|289764229|ref|ZP_06523607.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis GM 1503] gi|294992955|ref|ZP_06798646.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis 210] gi|297632585|ref|ZP_06950365.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 4207] gi|297729559|ref|ZP_06958677.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN R506] gi|298527504|ref|ZP_07014913.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774196|ref|ZP_07412533.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu001] gi|306778941|ref|ZP_07417278.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu002] gi|306782728|ref|ZP_07421050.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu003] gi|306787096|ref|ZP_07425418.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu004] gi|306791653|ref|ZP_07429955.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu005] gi|306798474|ref|ZP_07436776.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu006] gi|306801690|ref|ZP_07438358.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu008] gi|306805902|ref|ZP_07442570.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu007] gi|306970298|ref|ZP_07482959.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu009] gi|306974531|ref|ZP_07487192.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu010] gi|307082239|ref|ZP_07491409.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu011] gi|307082583|ref|ZP_07491696.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu012] gi|313656886|ref|ZP_07813766.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN V2475] gi|2909577|emb|CAA17306.1| POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA (GDP-D-MANNOSE DEHYDRATASE) [Mycobacterium tuberculosis H37Rv] gi|13879601|gb|AAK44344.1| GDP-D-mannose dehydratase, putative [Mycobacterium tuberculosis CDC1551] gi|31616875|emb|CAD92977.1| POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA (GDP-D-MANNOSE DEHYDRATASE) [Mycobacterium bovis AF2122/97] gi|121491672|emb|CAL70130.1| Possible gdp-mannose 4,6-dehydratase gca [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603298|gb|EAY61573.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis C] gi|134152079|gb|EBA44124.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis str. Haarlem] gi|148504027|gb|ABQ71836.1| putative GDP-D-mannose dehydratase [Mycobacterium tuberculosis H37Ra] gi|148719831|gb|ABR04456.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis F11] gi|224771611|dbj|BAH24417.1| putative gdp-mannose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253318533|gb|ACT23136.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 1435] gi|289414400|gb|EFD11640.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T46] gi|289436995|gb|EFD19488.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 605] gi|289541758|gb|EFD45407.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T17] gi|289689172|gb|EFD56601.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T92] gi|289696761|gb|EFD64190.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis EAS054] gi|289711735|gb|EFD75751.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis GM 1503] gi|289715776|gb|EFD79788.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis T85] gi|298497298|gb|EFI32592.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308217204|gb|EFO76603.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu001] gi|308328063|gb|EFP16914.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu002] gi|308332435|gb|EFP21286.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu003] gi|308336199|gb|EFP25050.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu004] gi|308339802|gb|EFP28653.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu005] gi|308341297|gb|EFP30148.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu006] gi|308347579|gb|EFP36430.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu007] gi|308351521|gb|EFP40372.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu008] gi|308352204|gb|EFP41055.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu009] gi|308356169|gb|EFP45020.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu010] gi|308360109|gb|EFP48960.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu011] gi|308367676|gb|EFP56527.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis SUMu012] gi|326905871|gb|EGE52804.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis W-148] gi|328456819|gb|AEB02242.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis KZN 4207] Length = 318 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 150/343 (43%), Gaps = 45/343 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDI 59 M++ +TG G +GS L L L YA I S+L F+ +VDI Sbjct: 1 MKVWITGAGGMMGSHLAEML--------LAAGHDVYATYCR--PTIDPSDLQFNGAEVDI 50 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ F+PDA+ + AA+S+ S E +TTN++GT I+ E R Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR------- 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + YG +D +E P PY +KA++D L + +YG+ Sbjct: 104 -RVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGM 162 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLA-----ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +++ N GP + L + E S + + G+ + R + V D RA Sbjct: 163 HTVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRA 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPG 289 L L+L KG G YN+GG+ I +E+G +L +I + +++ ++ RP Sbjct: 222 LMLMLDKGEAGADYNVGGS-------IAYEMGDVLKQVI-AACKRDDIVPEVDPALLRPT 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ D SK+ + GW E L +T+ D +WR Sbjct: 274 DEKIIYGDCSKLAAITGW----QQEICLTQTIADMFD---YWR 309 >gi|206889234|ref|YP_002248313.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741172|gb|ACI20229.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 328 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 152/336 (45%), Gaps = 58/336 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 ++++VTGGAG+IGS + + L + QVL D L+Y S L+ L V D+ Sbjct: 5 IKILVTGGAGYIGSHVVKAL-GERGYQVLTYDNLSYG--------CRDSVLYGDLVVADL 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+E +R +EF+PDA+++FAA V S+ ++ N T L+E +C+ Sbjct: 56 ADKEKLRRVFEEFKPDAVIHFAASIVVPESVREPIKYYRNNFCNTLNLIE------ACIE 109 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 Q K+ FL S+ VYG +K E P +PY TKA ++L+ Sbjct: 110 QGVKN---FLFSSSAAVYGIPEKSPVDETASLAPINPYGRTKAMVEHLLADLSQAEDFRY 166 Query: 179 -------VLLSNCSNNYGPYHFPEK--LIPLAITRMIEGSHVFL--YG------DGQNVR 221 V ++ S G P+ LI LA+ + G FL YG DG +R Sbjct: 167 VSLRYFNVAGADISGRLGQRR-PDATHLITLAVKTAL-GKRPFLEIYGTDYPTRDGTCIR 224 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKS 274 D+++V+D H+ AL +++ G+ + +N G G + R+ +D + + Sbjct: 225 DYIHVDDLAEAHLLALEYLIQNGK-SDIFNCGYGHGYSVREVVDATKRVSGV-------D 276 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + E R R G D+ KIK+ + W P+ Sbjct: 277 FKVIETTR----REGDPPELVADNRKIKNTLCWMPK 308 >gi|255038334|ref|YP_003088955.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] gi|254951090|gb|ACT95790.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] Length = 334 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 35/344 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIG L + L+ ND L ID+L G +L + Sbjct: 1 MKILVTGAAGFIGFYLVKKLIGEGHEVFGIDNINDYYATSLKIDRLKECGIKHIDLAAPW 60 Query: 45 E-ISQSNL--FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 E I S++ ++F +VD+ + + + +E + D +VN AA++ + SI ++ +N+ Sbjct: 61 ENIYNSSIGNYAFQRVDLLNMDRLLELFEEHRFDYVVNLAAQAGIRYSIENPRSYLNSNV 120 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSAT 160 G F +LE C Q + F S+ VYG ++ FS + + P + Y+A+ Sbjct: 121 EGFFNILE-------CCRQYPPRKLVF--ASSSSVYGLNEEQPFSTEQKVDSPINVYAAS 171 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + A+ H Y + YGP+ P+ L ++ + ++ +GQ Sbjct: 172 KKSNELMAHAYSHLYKFTTVGLRFFTVYGPWGRPDMAPFLFADAILNDRPIKVFNNGQMK 231 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 RD+ YV+D V + V+ + E Y + K +D+++ I L +L ++ Sbjct: 232 RDFTYVDDIVDGIASVI-SADLSEYYQVFNIGNGKPVDLLYFIQCLEKSLGKEAVKEMHP 290 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + PG D++++++ G+ Q ++ G+ WY Sbjct: 291 M-----VPGDIVSTWADTTQLEASTGYKSQTDIAHGVELFASWY 329 >gi|298528883|ref|ZP_07016286.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] gi|298510319|gb|EFI34222.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] Length = 311 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 30/328 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVND---LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++++TGG GFIG YL + LKI VL + L G LKE FS D Sbjct: 3 KVVITGGCGFIGLNTIDYLKKNKSHLKISVLDNESL---GRKEYLKEFEGLEFFSG---D 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + + L + DA+V+ AA++ V SI + N++GTF +L R L Sbjct: 57 IRDSDLVDRVL--YGADAVVHLAADTRVLDSIADPVKNFQINVLGTFNVLNAVRNHSVPL 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + L + V+ E+M P SPY A+K S + A+ +YG+ Sbjct: 115 LVNASTGGAILGEVSPPVH---------ENMIPEPISPYGASKLSIEGYCSAFSGSYGVK 165 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAI-TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 SN YGP + + + A R++ + +YGDG +RD++YV+D + +Y L Sbjct: 166 ASSLRFSNVYGPRSYHKGSVVAAFFKRILADKPIDVYGDGTQIRDYVYVDDICQGIYSSL 225 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAI 296 G G Y +G I I L++ + + ++ +R+ R G Sbjct: 226 NIGAEG-VYQLG-------TGIPTSINQLIEIMQDVVGEYRDIKVRYHGFREGEIHTTYC 277 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + + + P+ + GL T W+ Sbjct: 278 DISKAEKALRYHPKTELTQGLKLTWEWF 305 >gi|192338748|gb|ACF04279.1| UDP-D-glucuronate carboxy-lyase [Eucalyptus grandis] Length = 346 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G +LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNF-FTGTKENLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D I + A + + I TN+IGT + L Sbjct: 92 EPLLVEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + +D Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 193 QHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQAPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E I++ + L++ + I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMIELAETVKELINPDVE--------ITMVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + +GL Sbjct: 304 RQRKPDITKAKELLGWEPKVKLRNGL 329 >gi|111115271|ref|YP_709889.1| nucleotide sugar epimerase [Borrelia afzelii PKo] gi|110890545|gb|ABH01713.1| nucleotide sugar epimerase [Borrelia afzelii PKo] Length = 355 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 64/367 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AG IG + + LV DLK + ++ L + + Sbjct: 1 MKIFLTGIAGIIGFHVAKKLVEKGHEVLGIDILNDYYDLKFKHERLEALGFCSKGVKTDK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PSS 155 G F +L+ R+ K++ F+ ST VYG +E++P N P + Sbjct: 121 GFFNVLDVCRVC-------KENIKHFVYASTSSVYG------INENIPSNEDSSTDHPLN 167 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG 215 Y+A+K S++ + A+ ++ IP YG Y P+ + L + G + ++ Sbjct: 168 LYAASKKSNEMIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGESINIFN 227 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNI 257 +G RD+ YV D +Y VLK + YNIG + K + Sbjct: 228 NGNMARDFTYVSDIANGVYKVLKNPARSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLL 287 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 D + E+ D K+Y + +E D K+K+++G+ + +++ G+ Sbjct: 288 DFIEELEANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKISIKEGI 339 Query: 318 NKTVCWY 324 + WY Sbjct: 340 KEFSQWY 346 >gi|56127265|gb|AAV76771.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093413|emb|CAR58868.1| CDP-tyvelose-2-epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 343 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 45/348 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGG GF+GS L + ++ I ++V D L+ G ++L +S F F+ DI ++ Sbjct: 9 LITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 67 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + ++ PD+ + A + + SI N+ GT LLE R + S Sbjct: 68 DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS------- 120 Query: 124 DQFRFLQISTDEVYGSLDKGLFSE--------DMP--YNPS------SPYSATKASSDYL 167 + ST++VYG L++ ++E D P Y+ S SPY +K ++D Sbjct: 121 -NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQY 179 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIE-----GSHVFLYGDGQN 219 +L + +G+ ++ S+ YG F + + + +E + G+G+ Sbjct: 180 MLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ 239 Query: 220 VRDWLYVEDHVRALYLVLKK-GRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VRD L+ ED + + L +I G +NIGG IV + L + + Y + Sbjct: 240 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-------IVNSLSLLELFKLLEDYCN 292 Query: 278 TELIRF--IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ RF + R R + D KI + I W P+ + + G+ K W Sbjct: 293 IDM-RFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDW 339 >gi|321468879|gb|EFX79862.1| hypothetical protein DAPPUDRAFT_304366 [Daphnia pulex] Length = 427 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 40/333 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L YL+ + +V+V+D N I N F + DI + Sbjct: 100 RILVTGGAGFVGSHLVDYLMREGH-EVIVVDNFFTGRKRNVEHWIGHGN-FELIHHDIVN 157 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + +L + I TN +GT + L Sbjct: 158 PLLI-------EVDEIYHLASPASPPHYMLNPVKTIKTNTVGTI----------NMLGLA 200 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ R L ST EVYG + SE P P + Y K ++ L A+ Sbjct: 201 RRVNARILIASTSEVYGDPEIHPQSESYWGHVNPIGPRACYDEGKRVAETLSYAYAKQEK 260 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP H + +++ I + ++ + +YG G+ R + YV D V L Sbjct: 261 VQVRVARIFNTYGPRMHMNDGRVVSNFILQALQNESITIYGHGKQTRSFQYVSDLVDGLV 320 Query: 235 LVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ++ Y + GN ID E ++ +++ + S + +ED P Sbjct: 321 ALMNSS-----YTLPINLGNPVEHTID---EFAQIIKSIVNGADSSIRYLPAVEDDP--- 369 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ K + W P+ ++++GL K V ++ Sbjct: 370 QRRRPDITRAKKYLNWEPKISLDAGLRKAVEYF 402 >gi|307325360|ref|ZP_07604562.1| UDP-glucose 4-epimerase [Streptomyces violaceusniger Tu 4113] gi|306888829|gb|EFN19813.1| UDP-glucose 4-epimerase [Streptomyces violaceusniger Tu 4113] Length = 328 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 52/338 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IGS + R + + V V+D L+ +G L E + I Sbjct: 1 MTWLITGGAGYIGSHVVRAMAEAGE-SVAVLDDLS-SGVRARLPED-----VPLVSGSIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + L + + +V+ AA+ V S+ + N+ G +LLE + Sbjct: 54 DRELLDRTLADLRVTGVVHLAAKKQVGESVEQPLRYYRENVHGLTVLLE---------AA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RFL S+ VYG D L +ED P P +PY TK + ++LV A G + + Sbjct: 105 VAAGVSRFLFSSSAAVYGMPDVELVTEDTPCLPINPYGETKLAGEWLVRAAGAAHSLSTA 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE +IP+ R+ EG ++G DG VRD+++VE Sbjct: 165 CLRYFNVAGATR-PELADTGVFNIIPMMFERITEGEPPRIFGEDYDTPDGTCVRDYIHVE 223 Query: 228 DHVRALYLVLKKGRIGER------YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D A +L + + +R NIG G + R+ D++ E+ Sbjct: 224 DLASA-HLAVARRLATQRAPGDLTVNIGTGQGVSVREMSDLIGEV-----------TGRP 271 Query: 279 ELIRFIEDRPGHDRRYAIDSSK-IKSEIGWFPQENMES 315 EL + R D + S++ I E+GW + ++ + Sbjct: 272 ELTPVVGPRRAGDPARVVGSTELIAKELGWSARHDVRA 309 >gi|86356988|ref|YP_468880.1| GDP-mannose 4,6-dehydratase protein [Rhizobium etli CFN 42] gi|86281090|gb|ABC90153.1| GDP-mannose 4,6-dehydratase protein [Rhizobium etli CFN 42] Length = 363 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 34/286 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 67 DMTDSTNLIRVVQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 123 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 181 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQERLYLGNLDAQRDWGHAREYVRG 239 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----ALIPKSYSHTEL 280 ++L+L++ GE +++ R +D F ++G +D + K Y T Sbjct: 240 MWLMLQQDEPEDYVLATGETHSV-----RSFVDKAFAKVGMPIDWRGHGVEEKGYDKTSG 294 Query: 281 IRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTV 321 +E P + R + D +K +++GW + +++ + + V Sbjct: 295 RCVVEIDPAYFRPTEVDLLIGDPTKAHTKLGWKHETSLDQLVTEMV 340 >gi|322818459|gb|EFZ25869.1| GDP-mannose 4,6 dehydratase, putative [Trypanosoma cruzi] Length = 354 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 43/331 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 I+TG G GS L L++ V + + + + N + I ++ + D+ D Sbjct: 11 IITGITGQDGSYLAELLLSK-GYNVHGVIRRSSSFNTGRIDHIYRNEHLTLHYGDMTDGT 69 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + +PD + N AA+SHV S + T+ IGT +LE R + + Sbjct: 70 VLHHLIAQLRPDEVYNLAAQSHVKVSFDTPEYTGQTDGIGTLKILEAIR------ANNLV 123 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 + RF Q ST E+YG + + +E P++P SPY+ K + ++ + + +YGI + Sbjct: 124 ETCRFYQASTSELYGKVQEVPQTEKTPFHPRSPYAVAKLYAFWITVNYRESYGIFACNGI 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G +K++ A+ R+ +G L G+ +RDW + +D+V ++L+L+ Sbjct: 184 LFNHESPRRGATFVTKKIVRAAV-RIKKGLQKELLLGNVNALRDWGHAKDYVHGMWLMLQ 242 Query: 239 KGR-------IGERYNIGGNNERKNIDIVF-EIGFLL------------DALIPKSYSHT 278 R GE++++ R+ ++ F ++G+ L D PK Sbjct: 243 AERPDDWVLATGEQHSV-----REFCNLTFRKLGYELEWSGSGVDEVAYDVADPKK---V 294 Query: 279 ELIRFIED--RPGHDRRYAIDSSKIKSEIGW 307 LIR RP D+ K + E+GW Sbjct: 295 PLIRVDPRYFRPAEVETLLGDARKAERELGW 325 >gi|320105350|ref|YP_004180940.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319923871|gb|ADV80946.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 316 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 143/335 (42%), Gaps = 39/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN---SLKEISQSNLFSFLQVD 58 ++++TG AGFIGS L LV ++V +D L N S KEI F Q+D Sbjct: 3 KVLITGAAGFIGSHLVDALVQRGDLEVRGLDNLVTGQRSNLDTSWKEI------DFYQID 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E +R A+ D I + AA V RS+ N+ GTF LLE R Sbjct: 57 LNDAEGLREAVAGV--DTIFHEAALPSVPRSVQDPRTSHIANVEGTFNLLEAAR------ 108 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ++ YG E M P SPY+ K +++ + ++ YG+ Sbjct: 109 ---AAGVRRIVYAASSSAYGDQPGFPRVETMRPEPISPYAVQKLTAELYLQSYFRVYGME 165 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +GP + ++ IT ++EG + GDG+ RD+ YV + V A Sbjct: 166 TVCLRYFNIFGPRQAADSPYSGVMAKWITTLLEGGTPRINGDGEQGRDFTYVANVVHANL 225 Query: 235 LVL---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG-- 289 L K G +NI ER ++ + AL+ + + + +R G Sbjct: 226 LAAETPKDAIAGRVFNI-ACGERHTLNATY-------ALMARLLNSSTKPEHGPERAGDV 277 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +I++S + G+ + E GL +TV WY Sbjct: 278 KDSLASIEAS--REAFGYSVVVDFEEGLRRTVEWY 310 >gi|302559541|ref|ZP_07311883.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus Tu4000] gi|302477159|gb|EFL40252.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus Tu4000] Length = 327 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 32/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGF+GS LC L+ D +V+ +D G+ ++ ++ + F ++ D+C+ Sbjct: 6 VVAGGAGFVGSHLCERLLTD-GWRVVCVDNFV-TGSAGNVAHLAGESRFRLIEADVCEGA 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + DA++N A+ + + E + GT LL+ R + Sbjct: 64 PPVAG----GVDAVLNLASPASPVDYLALPLETLRVGSEGTRHLLDLARAKGA------- 112 Query: 124 DQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST E YG + + P P S Y K ++ + +A+ ++G+ Sbjct: 113 ---RFVLASTSETYGDPLVHPQPESYWGNVNPVGPRSVYDEAKRYAEAITMAYRRSFGVD 169 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P I + + + + GDG R YV D V L + Sbjct: 170 TGIVRIFNTYGPRMRAHDGRAVPTFIRQALAHQPITVAGDGSQTRSLCYVSDLVDGL-VR 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + + R+ N+G E V + + L + R ++D P R Sbjct: 229 MTEARLAGPVNLGDQEEVT----VLRLAEWIRELTASPSGIVHVPRPVDD-PSVRR---P 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+++ + E+GW P+ + E GL +T+ W+ Sbjct: 281 DTTRAREELGWAPEFSTERGLIRTIDWF 308 >gi|282907463|ref|ZP_06315305.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282328368|gb|EFB58639.1| NAD dependent epimerase/dehydratase [Staphylococcus aureus subsp. aureus WW2703/97] Length = 283 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 24/290 (8%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 +K ++ ++F ++DI + + + +K +Q D +++ AA V S+ N++ Sbjct: 1 MKSLADDHVF---ELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVV 57 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 T LLE + + S + RF+ S+ VYG L S+ P SPY+ K Sbjct: 58 ATLKLLETIKKYNSHIK-------RFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKY 110 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRM---IEGSHVF-LYGDGQ 218 + L + Y IP + N +GP P+ I++M E + F +GDG Sbjct: 111 YGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGL 170 Query: 219 NVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD++YV D V+++ L+++ K +G YNIG +++ IG L KS H Sbjct: 171 QTRDFVYVYDVVQSVRLIMEHKDAVGHGYNIGTGTFTNLLEVYRIIG----ELYGKSVEH 226 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 F E R G + D S +K+ +G+ P+ +E+GL + +DN Sbjct: 227 D----FKEARKGDIKHSYADISNLKA-LGFVPKYTVETGLKDYFNFEVDN 271 >gi|226334858|ref|YP_002784530.1| putative nucleotide-sugar epimerase [Rhodococcus opacus B4] gi|226246078|dbj|BAH56178.1| putative nucleotide-sugar epimerase [Rhodococcus opacus B4] Length = 320 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 150/337 (44%), Gaps = 36/337 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++TG AGFIGS L R L+++ I+V +D LT Y +L ++L I +S F F++ Sbjct: 1 MVALITGVAGFIGSTLARRLISE-GIEVRGVDSLTDYYDPDLKKSNLASIPKSR-FEFVE 58 Query: 57 VDICDREC---IRSALKEFQPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEET 111 D+ E +R EF + + A + V +S G+ D + N+ T LLE Sbjct: 59 GDLNTLELSDLLRGV--EF----VFHQAGQPGVRKS-WGSEFDLYALDNVQATQRLLEAV 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 + S + + + S+ VYG +L D P P SPY TK ++++L Sbjct: 112 KTDGSRIK-------KLVYASSSSVYGNALQYPTVESDTP-RPLSPYGVTKLAAEHLCSL 163 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 +G +GIP + YGP P+ +++G + +YG G +RD+ Y++D V Sbjct: 164 YGENFGIPTVSLRYFTVYGPGQRPDMAFTRFFRAVLQGDSIEVYGTGDQIRDFTYIDDIV 223 Query: 231 RA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A + YN+ G + + + IG + + S T G Sbjct: 224 EANIAAAFSDVPPASVYNVAGGSSVSLNETIKIIGDITKRPVEISSGGTVA--------G 275 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R ++KI SE+GW P ++ GL K W D Sbjct: 276 DVFRTGGSTAKISSELGWSPIVPIDDGLEKQYQWARD 312 >gi|254283531|ref|ZP_04958499.1| UDP-glucuronic acid decarboxylase 1 [gamma proteobacterium NOR51-B] gi|219679734|gb|EED36083.1| UDP-glucuronic acid decarboxylase 1 [gamma proteobacterium NOR51-B] Length = 321 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ D ++L +D L + G ++ + F F++ DI Sbjct: 10 RILVTGGAGFLGSHLIDRLL-DQGHELLCVDNL-FTGTKRNIDHLHNHPRFEFMRHDI-- 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 66 -----TLPLYVEVDEIYNLACPASPIHYQYDPVQTTKTSVHGAI----------NMLGLA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG SE P P S Y K ++ L + + Sbjct: 111 KRLKCRILQASTSEVYGDPSVHPQSESYWGNVNPIGPRSCYDEGKRCAETLFFDYHRQHA 170 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP +H +++ IT+ + G + +YG+G+ R + YV+D + L Sbjct: 171 LDIKVARIFNTYGPRMHHADGRVVSNLITQALRGDPITIYGNGEQTRSFCYVDDLIDGLI 230 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 +++ R + N+G E F + L + ++ + S +E + +D P Sbjct: 231 QLMESDRKVTGPINLGNPAE-------FTVRELANKILVMTNSTSEWVELPLPQDDP--- 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R + K + +GW P +++ GL KT+ ++ Sbjct: 281 KRRRPNIEKAQEVLGWQPTVSLDEGLGKTIDFF 313 >gi|113972213|ref|YP_736006.1| UDP-glucuronate 5'-epimerase [Shewanella sp. MR-4] gi|113886897|gb|ABI40949.1| UDP-glucuronate 5'-epimerase [Shewanella sp. MR-4] Length = 335 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 148/339 (43%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L +V+ ID L L L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCAQGH-EVVGIDNLNDYYDVGLKLARLAPLEALSNFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + E +++ AA++ V S+ + +N++G +LE R Sbjct: 60 LDLADRDGIAALFAEQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGDTIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGE---RYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 V K R G VF IG LLD + + + +F+ Sbjct: 231 VQDKPPRPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALESALGIEAKKQFLP 290 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D+ + +G+ PQ ++ +G+++ V WY Sbjct: 291 MQPGDVHSTWADTEDLFKAVGYKPQVDINTGVSRFVEWY 329 >gi|87308552|ref|ZP_01090692.1| CDP-tyvelose epimerase [Blastopirellula marina DSM 3645] gi|87288644|gb|EAQ80538.1| CDP-tyvelose epimerase [Blastopirellula marina DSM 3645] Length = 336 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 128/284 (45%), Gaps = 50/284 (17%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F ++DI DRE + +++ +PD IV+ AA+ DR+ A + TN IGT LLE Sbjct: 44 FQHHELDIRDREGVLQLVQQLKPDLIVHTAAQPSHDRAAAIAFDDFDTNAIGTLNLLESV 103 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL---------------FSEDMPYNPS-- 154 R S F+ +ST++VYG + F + +P + S Sbjct: 104 RRTCS--------DSPFVFMSTNKVYGDRPNTIPLRESAERFDYADETFEQGVPESLSID 155 Query: 155 ----SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYH-------FPEKLIPLAIT 203 S + A+KA++D +V +G +GIP GP H F L+ +T Sbjct: 156 QCTHSLFGASKAAADLMVQEYGRYFGIPTCCLRAGCVTGPAHSGVQLHGFLSYLVKCNLT 215 Query: 204 RMIEGSHVFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFE 262 + H ++G G+ VRD ++ D R + K R GE YN+GG E N + E Sbjct: 216 Q----KHYTIFGYQGKQVRDNIHPLDIARFIEAFAAKPRFGEVYNLGGGKE--NSCSILE 269 Query: 263 IGFLLDAL--IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 L + L IP+ YS++E ++R G Y D +KIKS Sbjct: 270 AFALTEELTGIPQVYSYSE-----QNRIGDHICYYSDLAKIKSH 308 >gi|300865719|ref|ZP_07110483.1| GDP-mannose 4,6-dehydratase [Oscillatoria sp. PCC 6506] gi|300336275|emb|CBN55633.1| GDP-mannose 4,6-dehydratase [Oscillatoria sp. PCC 6506] Length = 343 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 25/325 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ + +V I + + N + + I N FL Sbjct: 6 RALITGITGQDGSYLSELLL-EKGYEVHGIIRRSSTFNTDRIDHIYVDPHSENARLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E +P I N A+SHV S + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRILEEVKPAEIYNLGAQSHVRVSFDAPEYTVDAVGLGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q + E+YG + + E P+ P SPY+ K + + + + +YG Sbjct: 123 --RHRTGIEVRFYQAGSSEMYGLVQEVPQKETTPFYPRSPYACAKVYAHWQTVNYRESYG 180 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I A+ R++ G LY G+ + RDW Y +D+V+ Sbjct: 181 MFASNGILFNHESPRRGET-FVTRKITRAVARIVAGKQKKLYLGNLDSKRDWGYAKDYVK 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPG 289 A++L+L+ + + NE +I FL A + E + F E RP Sbjct: 240 AMWLMLQHDEPDD--YVVATNETHSIR-----EFLDKAFNCVNLDWHEYVEFDERYLRPA 292 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 DS+K + ++GW P E Sbjct: 293 EVELLIGDSTKARQKLGWEPSVTFE 317 >gi|294140265|ref|YP_003556243.1| nucleotide sugar epimerase [Shewanella violacea DSS12] gi|293326734|dbj|BAJ01465.1| nucleotide sugar epimerase [Shewanella violacea DSS12] Length = 334 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 14/241 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL-NSLKEISQSNLFSFLQV 57 M+ +VTG AGFIGS + L +V+ ID + Y NL NS + ++ F F++ Sbjct: 1 MKYLVTGVAGFIGSCVVERLTEQGH-KVIGIDNVNDYYDTNLKNSRLKRAEHKNFKFIKN 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR + + E Q D +++ AA++ V SI + +N+IG +LE C Sbjct: 60 DLADRAAMATLFTEHQFDRVIHLAAQAGVRYSIENPMAYADSNLIGHLNILE------GC 113 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K + S+ VYG K FS D +P S Y+ATK S++ + ++ H Y Sbjct: 114 RNTKVK---HLVYASSSSVYGLNSKVPFSTSDTVDHPISLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + +++ G + + +G RD+ Y++D V + + Sbjct: 171 IPTTGLRFFTVYGPWGRPDMAPYIFTKKILSGETIDINNNGDMWRDFTYIDDIVEGVIRI 230 Query: 237 L 237 + Sbjct: 231 V 231 >gi|182415794|ref|YP_001820860.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] gi|177843008|gb|ACB77260.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] Length = 354 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 52/365 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA------GNLNSLKEISQSNLFSFL- 55 L+VTG +G IGS +C Y +L +V +D A G+ ++ +L F+ Sbjct: 5 LLVTGSSGLIGSEVCVYFARELGYKVHGVDNNQRAVFFGPQGDTRWNQQRLARDLPGFVH 64 Query: 56 -QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++DI DR + + +K PD IV+ AA+ DR+ + TN +GT LLE TR Sbjct: 65 HELDIRDRAGVLALVKSVAPDVIVHTAAQPSHDRAAAIPFDDFDTNAVGTLNLLEATR-- 122 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGL---------------FSEDMP------YNP 153 + F+ +ST++VYG + ++ +P + Sbjct: 123 ------QAAPESPFVHMSTNKVYGDAPNRIALTELATRWDYADPAYAHGIPETFTIDQSK 176 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIEGSH 210 S + A+K ++D +V +G + +P GP H +L + + +EG Sbjct: 177 HSLFGASKVAADVMVQEYGRYFNLPTCCLRGGCLTGPNHSGVELHGFLSYLVKCNLEGRE 236 Query: 211 VFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 ++G G+ VRD ++ D R + + R GE YN+GG + N V E + + Sbjct: 237 YKVFGYKGKQVRDNIHSLDVARFMAAFVSAPRAGEVYNLGGG--KANSTSVLEAFKITEK 294 Query: 270 LIPKSYSHTELIRFIE-DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++ ++ ++E +R G Y D K+++ +PQ N+ L T+ ++ Sbjct: 295 FTDRA----QVFTYVEQNRIGDHICYYSDLRKMRAH---YPQWNITQSLEDTIRQIVE-A 346 Query: 329 WWWRP 333 W RP Sbjct: 347 WLRRP 351 >gi|311896636|dbj|BAJ29044.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae KM-6054] Length = 330 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 28/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV--IDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 R +VTG AGFIGS L L+ + + V D T G ++L F+F+ D+ Sbjct: 13 RAVVTGAAGFIGSHLVDALLGEGATVIGVDRRDPRTDPGAASNLAGALDHPGFTFVAADL 72 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGA--DEFITTNIIGTFILLEETRLWWSC 117 R C +AL Q DA+ + AA V RS G E+ N+ T R+ +C Sbjct: 73 --RTCPLTALF-LQADAVFHLAALPGV-RSSWGERFAEYTACNVFAT------ERVLAAC 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG--HTY 175 +D + R + S+ VYG+ G E++ NP SPY+ +K + + L LA T Sbjct: 123 --EDVRVP-RLVYASSSSVYGTTSGGATGEEIVPNPESPYAISKLAGEQLCLAHAGKATS 179 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + YGP + LI A+T + G + LYG+G RD+ YV D VRA Sbjct: 180 TVTAVALRLFTVYGPRQRDDMLIGRALTAALGGPALNLYGEGSQRRDFTYVGDVVRAAIA 239 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 NIG ++++ + L +P + + + G Sbjct: 240 AATAPIGTTVLNIGTGVTTTVLNVLAAVEELTGRPVP--------VNRLPTQAGDVEATL 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D+S+ +GW P+ + G+++ + +L+ N Sbjct: 292 ADNSRAVDLLGWKPRTALTQGVSRQLA-HLNAN 323 >gi|160877570|ref|YP_001556886.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|160863092|gb|ABX51626.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|315269768|gb|ADT96621.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS678] Length = 335 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 155/353 (43%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L L +V+ ID L Y NL L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCL-LGHEVIGIDNLNDYYDVNLKLARLDLLQTLDNFHFIK 59 Query: 57 VDICDRECIRS--ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+ DRE I + AL FQ +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGIAALFALHAFQ--RVIHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCR-- 115 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Sbjct: 116 -----HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANELMSHTYSH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 169 LYQLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGI 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFI--- 284 LV K R N D E G + P + S +L+ FI Sbjct: 229 ILVQAK------------PPRPNTDWTVEAGTPATSSAPYRVFNIGNGSPVQLLDFITAL 276 Query: 285 ED-------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ED +PG D++ + +G+ P ++ +G+ + V WY Sbjct: 277 EDALGIKANKNLLPMQPGDVHSTWADTNDLFDAVGYKPLVDINTGVMQFVDWY 329 >gi|261855611|ref|YP_003262894.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] gi|261836080|gb|ACX95847.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] Length = 335 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/347 (24%), Positives = 153/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 MR++VTG AGFIGS+ L+ VL ID L Y NL L + F+F++ Sbjct: 1 MRVLVTGAAGFIGSSTALRLLARGD-TVLGIDNLNDYYDVNLKKARLARLDAHERFAFIE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR I E + D +V+ AA++ V SI ++ +N++G +LE R Sbjct: 60 MDISDRPAIERLFAEQKIDRVVHLAAQAGVRYSIENPHAYVESNLVGFVNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ + FS D +P S Y+ATK +++ + + Y Sbjct: 116 -----HASVGHLVYASSSSVYGANESLPFSVHDNIDHPLSLYAATKKANELMAHTYSSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + ++ G++ RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEPIDVFNYGKHRRDFTYIDDIVEGVIR 230 Query: 236 VL------------KKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L K G YNIG + + ++++ I + A+ K+ Sbjct: 231 TLDHTAESNPNWNGAKPDPGTSRAPWRVYNIGNS---QPVELLTYIECIEQAIGKKAE-- 285 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + + +++G+ P ++ G+ V WY Sbjct: 286 ---LNLLPMQPGDVPDTFADVADLVADVGYQPSTPVDVGVRNFVDWY 329 >gi|206900269|ref|YP_002251066.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] gi|206739372|gb|ACI18430.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] Length = 329 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 44/329 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + + L+ +V+V+D L L F VD+ ++ Sbjct: 4 ILVTGGAGYIGSHVVKELLKK-GYKVVVLDNLQKGHKKAVLTPY-------FENVDLKEK 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 ++ ++++ DAI++FAA S V S+ ++ NI+G LLE L +D Sbjct: 56 NLLKGVFEKYEIDAIMHFAALSTVGESMREPFKYYENNILGGLNLLE--------LMKDH 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 ++ F+ ST VYG ED P NP++ Y ++K + ++ + YGI + Sbjct: 108 NIKY-FIFSSTAAVYGEPQVIPIPEDHPKNPTNVYGSSKLMFEEILNWYDRIYGIKYVSL 166 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIP+ + T + + +V +YG DG +RD+++V Sbjct: 167 RYFNAAGADPEGELGEDHRPETHLIPIVLKTALGQREYVEIYGTDYPTPDGTCIRDYIHV 226 Query: 227 EDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L L+ G E +N+G NER V E+ + + ++ + E R Sbjct: 227 VDLAEAHILALEALFDGMSSEIFNLG--NERGY--SVREVISIAEKVVGQKIPVKEGQR- 281 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 RPG S+KIK + W P+ N Sbjct: 282 ---RPGDPAVLIASSNKIKKNLKWKPKFN 307 >gi|55296457|dbj|BAD68653.1| putative root cap-specific protein [Oryza sativa Japonica Group] gi|55296998|dbj|BAD68473.1| putative root cap-specific protein [Oryza sativa Japonica Group] gi|125553969|gb|EAY99574.1| hypothetical protein OsI_21549 [Oryza sativa Indica Group] gi|215686462|dbj|BAG87723.1| unnamed protein product [Oryza sativa Japonica Group] gi|215707052|dbj|BAG93512.1| unnamed protein product [Oryza sativa Japonica Group] Length = 375 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 26/278 (9%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 96 ADLSDSSSLRRALDHILPDEVYNLAAQSHVAVSFEVPDYTADVTATGALRLLEAVRL--- 152 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q + E++GS SE P++P SPY+A K ++ + + + YG Sbjct: 153 -----ASKRIRYYQAGSSEMFGSTPPPQ-SESSPFHPRSPYAAAKVAAHWYTVNYREAYG 206 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + VL ++ S G +F + I A+ R+ G + VFL G+ RDW + D+V Sbjct: 207 LFACNGVLFNHESPRRG-ENFVTRKITRAVGRIKVGLQTKVFL-GNLSAARDWGFAGDYV 264 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++ +L++ + G+ + E ++ + F L K + + F RP Sbjct: 265 EAMWRMLQQDKPGD--YVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDKKYF---RPAE 319 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D++K + E+GW P+ G + V +DN+ Sbjct: 320 VDSLQGDATKARKELGWKPK----VGFQQLVEMMVDND 353 >gi|313892813|ref|ZP_07826394.1| UDP-glucose 4-epimerase [Veillonella sp. oral taxon 158 str. F0412] gi|313442744|gb|EFR61155.1| UDP-glucose 4-epimerase [Veillonella sp. oral taxon 158 str. F0412] Length = 329 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 44/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E +F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVTFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE +++FAA S V S++ + N++G++ L+E R Sbjct: 54 DPKLV-DIMKEHNIIGVMHFAAHSQVGESMVNPAIYYENNVVGSYHLIESAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ ST VYG + E P++ Y TK + ++ + YG + Sbjct: 105 -AAGVKHFVFSSTAAVYGEPEVVPIREGAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + H+ ++G DG VRD++ Sbjct: 164 ALRYFNAAGADPSGTIGEDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A L L+KG + +N+G N +I+ ++ IP Y Sbjct: 224 HVNDLAAAHVLAMDYLRKGGESQVFNLGSGNGFSVKEIIETAKEVIGIDIPVQYG----- 278 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 E R G S KIK+ +GW P+ Sbjct: 279 ---ERRAGDPGTLIASSEKIKNLLGWDPK 304 >gi|209552271|ref|YP_002284186.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539383|gb|ACI59315.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 367 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 38/287 (13%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 71 DMTDSTNLIRVVQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 126 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 127 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 184 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 185 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQERLYLGNLDAKRDWGHAREYVRG 243 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----ALIPKSYSHTEL 280 ++L+L++ GE +++ R +D F ++G +D + K Y T Sbjct: 244 MWLMLQQDEPEDYVLATGETHSV-----RSFVDKAFAKVGMQIDWRGTGVEEKGYDKTSG 298 Query: 281 IRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVC 322 +E P + R + D +K +++GW E+ L++ V Sbjct: 299 RCVVEIDPAYFRPTEVDLLIGDPTKAHTKLGW----KHETSLDQLVA 341 >gi|254562193|ref|YP_003069288.1| UDP-glucuronate 5'-epimerase [Methylobacterium extorquens DM4] gi|254269471|emb|CAX25437.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acid epimerase) [Methylobacterium extorquens DM4] Length = 337 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQ 56 M +VTG AGFIG AL R L+ V D L+ Y L + +++QS F ++ Sbjct: 1 MHALVTGSAGFIGHALSRRLLAA-GFGVTGFDGLSPYYDVGLKRARHADLAQSPGFEAVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + +PD + + AA++ V S++ ++ N++G LLE R Sbjct: 60 ARLETPSALLDVMARVKPDLVFHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + K L ST YG F E D +P + Y+A+K +++ + ++ H + Sbjct: 116 --AHPVK---HLLAASTSSAYGGNASVPFRETDRAVSPLTLYAASKLANEAMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP+ P+ + L +++ G + ++G+G RD+ +++D + A+ Sbjct: 171 RIPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLIDAIVA 230 Query: 236 VLKK--------GRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G + NIGG + + + IG L AL K+ Sbjct: 231 LSERPPPMPSEGGPVSAADTLSTVAPYRLVNIGGG---RPVRLDAMIGALEAALGRKA-- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ + PG R ++ +G P+ +E+G+ V WYLD Sbjct: 286 -ERVLKPLP--PGDVIRTHASPDLLRDLVGRLPETPLETGIPAFVRWYLD 332 >gi|225862486|ref|YP_002747864.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus 03BB102] gi|225789265|gb|ACO29482.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus 03BB102] Length = 321 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVGR-GYNVTIVDNF-YKGKNKYHDELMKE--IQVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVFA----STSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ ++ I L D S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKSIKEVAEVIKKLTD-----SSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E GL +T+ W+ + + Sbjct: 281 EIPNRR--PDVTKLKDLVQFQAKVTWEDGLKETIKWFREED 319 >gi|89070443|ref|ZP_01157740.1| hypothetical protein OG2516_18895 [Oceanicola granulosus HTCC2516] gi|89043929|gb|EAR50115.1| hypothetical protein OG2516_18895 [Oceanicola granulosus HTCC2516] Length = 337 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 44/348 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVDI 59 ++TG AGFIG L R L+ + +V D +T Y L + + QS F+ + + Sbjct: 5 LITGTAGFIGFHLARRLLAE-GWRVTGYDGMTDYYDVALKRRRHQVLLQSEGFAAHEGML 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + PD IV+ AA++ V S+ ++ N++GTF ++E R Sbjct: 64 EDSARFDAVADAAAPDVIVHLAAQAGVRYSLENPRAYLEANVMGTFTVMEAAR------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGIP 178 + L ST VYG+ + ++E + P + Y+ATK +++ + AW H + IP Sbjct: 117 --RHGVAHLLMASTSSVYGANTELPYAETHKADRPLTIYAATKKANEAMGHAWAHLHRIP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV-- 236 V + YGP+ P+ + ++EG+ + +Y G RD+ YV+D VR + L+ Sbjct: 175 VTMFRFFTVYGPWGRPDMALFKFTRGILEGTPIDIYNHGDMWRDFTYVDDLVRGIALLID 234 Query: 237 -----------------LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 L NIG + + +D V I ++ + Sbjct: 235 TPPPPPGAPRPDIAGDTLSDAAPWRVVNIGNSESVRLLDFVEAI---------EAATGRR 285 Query: 280 LIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 IR + D +PG DS+ +++ G+ P+ + G+ + V WY D Sbjct: 286 AIRNLMDMQPGDVPATWADSTLLRALTGYGPETKVAEGVAQFVGWYRD 333 >gi|75760243|ref|ZP_00740297.1| NAD dependent epimerase/dehydratase family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895563|ref|YP_002443974.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus G9842] gi|74492269|gb|EAO55431.1| NAD dependent epimerase/dehydratase family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543179|gb|ACK95573.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus G9842] Length = 321 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV +V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVRR-GYEVTIVDNF-YKGKNKYHNELMRE--MRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGK-GKPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ ++ I L KS S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKSIKEVAETIKKLT-----KSSSKIIQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR + +K++ + + E GL +T+ W+ + N Sbjct: 281 EIPNRRPNV--TKLRELVQFQATVTWEQGLKETIKWFHEEN 319 >gi|292491431|ref|YP_003526870.1| GDP-mannose 4,6-dehydratase [Nitrosococcus halophilus Nc4] gi|291580026|gb|ADE14483.1| GDP-mannose 4,6-dehydratase [Nitrosococcus halophilus Nc4] Length = 374 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 10/186 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 63 DLTDATNLIRVIQEVQPDEIYNLAAQSHVAVSFETPEYTANADALGTLRLLEAIRIL--- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +D+ RF Q ST E+YG + +E+ P+ P SPY+A K + ++ + + YG+ Sbjct: 120 ---RMEDKVRFYQASTSELYGKVQSVPQNEETPFYPRSPYAAAKLYAYWITVNYREAYGM 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R++ G LY G+ + RDW + D+V+A Sbjct: 177 YACNGILFNHESPVRGETFITRKITRALARIVLGLQDCLYIGNLEARRDWGHARDYVKAQ 236 Query: 234 YLVLKK 239 +L+L++ Sbjct: 237 WLMLQQ 242 >gi|226321075|ref|ZP_03796617.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 29805] gi|226233485|gb|EEH32224.1| NAD dependent epimerase/dehydratase family protein [Borrelia burgdorferi 29805] Length = 355 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKAINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVGDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K ++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKHDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|225552264|ref|ZP_03773204.1| NAD dependent epimerase/dehydratase family protein [Borrelia sp. SV1] gi|225371262|gb|EEH00692.1| NAD dependent epimerase/dehydratase family protein [Borrelia sp. SV1] Length = 355 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV +LK + ++ L + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNNYYELKFKHERLEALGLCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKAINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVSDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIQEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|254431768|ref|ZP_05045471.1| UDP-glucose 4-epimerase [Cyanobium sp. PCC 7001] gi|197626221|gb|EDY38780.1| UDP-glucose 4-epimerase [Cyanobium sp. PCC 7001] Length = 341 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 166/358 (46%), Gaps = 56/358 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L + VLV+D L Y G+ + +++ Q L + + Sbjct: 1 MTILVTGGAGYIGSHTVRALQRAGQ-PVLVLDNLVY-GHRDIAEQVLQVPLVTG---QLG 55 Query: 61 DRECIRSALKEFQPD-------AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DR + + L+ P A+++FAA ++V S+ + N+ T +LLE + Sbjct: 56 DRPLLDALLQGHHPQLPAGPVRAVLHFAAYAYVGESVSDPARYYRNNLGDTLVLLEALQ- 114 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 +Q + + ST YG + D+ +E P P +PY +K + L+ + Sbjct: 115 ---AEAQRRGLPIPLVFSSTCATYGIPAPDQIPINERCPQAPINPYGRSKWMVEQLLADF 171 Query: 172 GHTYGIPVLL--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------ 215 G YG P ++ ++ + + G H PE LIPL + + + ++G Sbjct: 172 GAAYGQPSVIFRYFNAAGADPAADLGEDHDPETHLIPLVLEALAGRRESIAVFGRDYPTP 231 Query: 216 DGQNVRDWLYVED----HVRALYLVLKKGRIGER-YNIG---GNNERKNIDIVFEIGFLL 267 DG +RD+++V D HV L +L++G G+ YN+G G + ++ I+ I Sbjct: 232 DGTGIRDYIHVADLAAAHVLGLDRLLQQG--GQHIYNLGTGRGYSVQEVINAACRI---- 285 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWY 324 +S + R RPG D+S+ +E+GW PQ ++++ L+ W+ Sbjct: 286 ---TGRSLRELDAPR----RPGDPAELVADASRAMAELGWTPQRSDLDTILSDAWAWH 336 >gi|78183807|ref|YP_376241.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9902] gi|78168101|gb|ABB25198.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9902] Length = 340 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 48/350 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIGSAL + L+ +V+ +D L L ++ ++Q + F Sbjct: 5 VLVTGAAGFIGSALSQRLLQQGD-RVVGVDNLNSYYDPALKQARLRQIEAVAQEGNWRFE 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 V + E + +P +VN AA++ V SI +I +N++G +LE R Sbjct: 64 SVALEHGEALMKLFSAEKPQVVVNLAAQAGVRYSIENPAAYIQSNLVGFGHILEGCR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 121 ------HHGVGNLVYASSSSVYGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRA- 232 YG+P YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V Sbjct: 175 YGLPATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGKMQRDFTYIDDIVEGV 233 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIE----- 285 L K I ++ + VF IG + TEL+RFIE Sbjct: 234 LRCCDKPATINPDFDPLQPDPATAAAPHRVFNIG---------NSQPTELLRFIEVMEQA 284 Query: 286 -----------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG A +++ ++ +G+ P ++ G+++ WY Sbjct: 285 LGCEAIKNFQPMQPGDVVATAANTAALEDWVGFRPSTPIQVGVDRFAQWY 334 >gi|332707097|ref|ZP_08427155.1| GDP-mannose 4,6-dehydratase [Lyngbya majuscula 3L] gi|332354122|gb|EGJ33604.1| GDP-mannose 4,6-dehydratase [Lyngbya majuscula 3L] Length = 357 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 21/318 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R ++TG G GS L L+ +V I + T N + + I Q+ LF Sbjct: 6 RALITGITGQDGSYLAELLLEK-GYEVHGIIRRTSTFNTDRIDHIYQDPHNPQTRLFLHY 64 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D ++ L++ QP + N A+SHV S + + IGT LLE R + Sbjct: 65 G-DLTDGLTLQRILEDVQPIEVYNLGAQSHVRVSFDSPEYTVDATGIGTLRLLEAVRHY- 122 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q + RF Q + E++G + SE P+ P SPY+ K + + + + +Y Sbjct: 123 ---QQRIGSEVRFYQAGSSEMFGLVQAVPQSETTPFYPRSPYACAKVYAHWQTINYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ N+ P F + I A+ R++ G LY G+ RDW Y +D+VR Sbjct: 180 GLFACNGILFNHESPRRGETFVTRKITRALARIVAGQQNKLYLGNLDARRDWGYAKDYVR 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++L+L++ + + + +I +I F L L + Y + F RP Sbjct: 240 AMWLMLQQDEPDD--YVVATGQTHSIREFLDIAFGLVNLDWEQYVEIDPRYF---RPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFP 309 D +K + +GW P Sbjct: 295 DLLLGDGTKANTILGWQP 312 >gi|317129533|ref|YP_004095815.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315474481|gb|ADU31084.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 315 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 28/261 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE--------ISQSNLF 52 M+++VTG AGFIGS LC L+ + V+ ID NSL E + ++ F Sbjct: 1 MKILVTGAAGFIGSHLCETLLINKNYHVVGIDGYIN----NSLDEEKRGLINRLLKNERF 56 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGAD--EFITTNIIGTFILLEE 110 +F + ++ + + + E D I + A V R+ G + +++ NI T LLE Sbjct: 57 TFYEENMLNISW-DNVISEI--DVIYHLAGIPGV-RASWGENFNDYVIHNIQATQRLLE- 111 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 +C+ DK RF+ ST VYG G SED P SPY TK + + L Sbjct: 112 -----ACI--DKPRLQRFIYASTSSVYGE-KHGKVSEDATPRPLSPYGVTKLTCENLFRI 163 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + TY +P+++ +GP + + I +M+ + ++GDG RD+ Y+ D + Sbjct: 164 YYQTYRLPIVILRYFTVFGPRQRDDMAFHIFIKKMLSEETIPVFGDGLQTRDFTYIRDCI 223 Query: 231 RALYLVLKKGR-IGERYNIGG 250 A L IGE NIGG Sbjct: 224 AATISALHSDNVIGETINIGG 244 >gi|116249586|ref|YP_765424.1| putative GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. viciae 3841] gi|115254234|emb|CAK03849.1| putative GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. viciae 3841] Length = 363 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 38/287 (13%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + GT LLE RL Sbjct: 67 DMTDSTNLIRVVQETQPDEIYNLAAQSHVQVSFETPEYTANADGTGTLRLLEAIRL---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK RF Q ST E+YG + + SE P+ P SPY+A K + ++V+ + YG+ Sbjct: 123 LGLTKKT--RFYQASTSELYGKVQEVPQSETTPFYPRSPYAAAKLYAYWIVVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ P E + ITR H+ L G+ RDW + ++VR Sbjct: 181 HASNGILFNHESPIR-GETFVTRKITRAAAAIHLGLQERLYLGNLDAKRDWGHAREYVRG 239 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD----ALIPKSYSHTEL 280 ++L+L++ GE +++ R +D F ++G +D + K Y T Sbjct: 240 MWLMLQQDEPEDYVLATGETHSV-----RSFVDKAFAKVGMPIDWRGNGVEEKGYDKTSG 294 Query: 281 IRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVC 322 +E P + R + D +K +++GW E+ L++ V Sbjct: 295 RCVVEIDPAYFRPTEVDLLIGDPTKAHTKLGW----KHETSLDQLVA 337 >gi|148657682|ref|YP_001277887.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148569792|gb|ABQ91937.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 317 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 147/333 (44%), Gaps = 31/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEISQSNL---FSFLQ 56 MR ++TGGAGFIGS L L+ QV+ ID Y + I+++ ++ ++ Sbjct: 1 MRYLITGGAGFIGSHLSDALLARGD-QVVCIDNFNDYYDPARKRRNIARALTNPGYTLVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D D + + ++P + + A + S+ + N+ GT I+LE Sbjct: 60 ADFRDADAMDRIFAHYRPQRVAHIGAMAGPRPSMQNPALYEDVNVRGTLIVLETA----- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 ++ + D + ST VYG L +SE+ P + P S Y+ATK +++ L + Sbjct: 115 --ARYQVDGL--VLASTSSVYG-LSPTPWSEESPTDRPLSFYAATKKAAEVLAYTAHRRH 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV-RDWLYVEDHVRALY 234 GIP+ + YGP P+ L + M+ G + L+ G V RDW Y+ D V + Sbjct: 170 GIPIRIVRFFTVYGPRGRPDMTPHLFVDAMVAGKAITLFNGGIGVYRDWTYIADIVAGVI 229 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVF---EIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L E +N+G ++ + ID V E+ L ++ + D P Sbjct: 230 AALDMDAAFEIFNLGHSSPVQLIDFVRTLEEVTGLRAGIVAQPLPAA-------DPPVTF 282 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R ID K +G+ P+ ++E GL + WY Sbjct: 283 AR--ID--KATQMLGFQPRTSLEEGLARFWEWY 311 >gi|327537503|gb|EGF24225.1| UDP-glucose 4-epimerase [Rhodopirellula baltica WH47] Length = 328 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 144/331 (43%), Gaps = 49/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++ V GGAG+IGS L+ D V+V D L+ G+ S+ E ++ D+ Sbjct: 1 MKVFVVGGAGYIGSHAVALLL-DAGHDVVVFDNLSR-GHAKSVPE------GLLVEGDLN 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S LKE DA+++FAA + V S+ + N++ T LLE R Sbjct: 53 DQAKLTSLLKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + + ST YG D E P NP +PY +K + + + H YG Sbjct: 105 -AADVKKIVFSSTTATYGQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYA 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + G +H PE LIP+ + + + + ++G DG +RD++ Sbjct: 164 ALRYFNAAGARPDGTIGEHHDPESHLIPIVLQVALGQRESISIFGDDYPTPDGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V+D H+RAL LK G G + N+G +IV + IP+ Sbjct: 224 HVDDLGDAHLRALDR-LKPGE-GIQVNLGTGRGTSVREIVDACRAVTGHPIPEVMG---- 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFPQ 310 E RPG D I +K+ E+ GW P+ Sbjct: 278 ----ERRPG-DPAELIADAKLAGEVLGWKPR 303 >gi|323703554|ref|ZP_08115199.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323531457|gb|EGB21351.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 309 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 53/337 (15%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TG GFIG+ L L ++++ + + + L++ + ++ DI D + Sbjct: 1 MTGAGGFIGTHLLDRLAGEVEVGEIAV--VIRGKGLSAPARVMCK--IQIIEADILDYQR 56 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 + + + +F PD I + A RS + TN+ GT LL Q+ Sbjct: 57 LSNEISKFYPDMIFHLAGTRPRSRSWGAIQQAYQTNLTGTMNLLRSV--------QEIPC 108 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNC 184 Q L ST E YG + E P PS PY A+KA++ L + + PV++ Sbjct: 109 QSIVLVGSTAE-YGR-GPAPYQESQPLQPSDPYGASKAAATTLAVLTYQLFNYPVIILRP 166 Query: 185 SNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IG 243 + YGP + + I ++ G H + G G+ RD++YV D V AL+ R +G Sbjct: 167 TLVYGPGQNDDCFMSQLIRSLLSGRHFSMTG-GEQYRDFVYVSDVVEALWQAANNPRALG 225 Query: 244 ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR----------- 292 +NIG KSY E+ R I D G Sbjct: 226 GIFNIGSG---------------------KSYPLREVARMIADFIGQPDDLLKIGALPYN 264 Query: 293 -----RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 Y +D + K + W P+ + G+ TV W+ Sbjct: 265 KEEQFAYCVDINSAKQVLNWQPKIMLREGIKATVDWF 301 >gi|77463730|ref|YP_353234.1| NAD-dependent epimerase/dehydratase family protein [Rhodobacter sphaeroides 2.4.1] gi|77388148|gb|ABA79333.1| NAD-dependent epimerase/dehydratase family protein [Rhodobacter sphaeroides 2.4.1] Length = 345 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 144/330 (43%), Gaps = 41/330 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ + V+ +D L G ++ + F FL+ DI +R Sbjct: 26 ILVTGGAGFVGSHLCERLIAEGH-SVVCLDNL-LTGRKENVAGLLDHPQFRFLEQDILNR 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L D I N A + + + I TF E L + L+ + Sbjct: 84 IDWQGPL-----DEIYNLACAA--------SPPLYQRDPIHTFRTCTEGVL--NLLALAR 128 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHTY 175 R LQ ST EVYG D + + Y P + Y K +++ L +G Sbjct: 129 ATGARILQASTSEVYG--DPEISPQHEGYRGCVNTVGPRACYDEGKRAAETLFWEFGAHQ 186 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP PE +++ I + + S + LYGDG R + YV+D V L Sbjct: 187 GLEVRIARIFNTYGPRMSPEDGRVVSNFIVQALTRSDITLYGDGMQTRSFCYVDDLVAGL 246 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 + L + E N+G E F + L + ++ ++ S + L+ D P Sbjct: 247 -MALMASEVSEPVNLGNPGE-------FTMRELAEMVLTQTGSSSRLVHRPLPVDDP--- 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R+ D ++ +GW P + G+ +T+ Sbjct: 296 RQRRPDIAQAARLLGWAPTVPLAEGIARTI 325 >gi|168179790|ref|ZP_02614454.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|182669326|gb|EDT81302.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] Length = 307 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSDVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPGYLPIDEKHVIMPISYYGLSKYTAEEYIRLFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + + ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG V E+ + +I Y+ I + R G + Sbjct: 224 SSGS-KERFNIGTGVYTS----VKELAENMIDIIGLKYN----IEYASARKGDIANSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLKKTIEYYKNN 304 >gi|163853530|ref|YP_001641573.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163665135|gb|ABY32502.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 333 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 51/339 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G+ ++L + + F ++ D+ Sbjct: 4 RILVTGGAGFVGSHLCDRLVAQGH-DVLAVDNF-YTGDRSNLAQHLSNPRFEVMRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++IG + L Sbjct: 60 -----TFPLYVEVDEIYNLACPASPIHYQRDPV---QTTKTSVIGAI----------NML 101 Query: 119 SQDKKDQFRFLQISTDEVYGSLD--------KGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K+ LQ ST E+YG D +GL S P + Y K ++ L Sbjct: 102 GLAKRLGIPILQASTSEIYGDPDVHPQPEDYRGLVSVS---GPRACYDEGKRCAETLFFD 158 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + + +P+ ++ N YGP + +++ + + + G + LYGDG+ R + +V+D Sbjct: 159 YQRRHHVPIRVARIFNTYGPRMNRDDGRVVSNFVVQALRGEPITLYGDGRQTRAFCFVDD 218 Query: 229 HVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIE 285 V L ++ +G + N+G E +I I I + S +E++ + Sbjct: 219 LVEGLMRLMNVEGTLDGAVNLGNPTEVTIAEIAHRI-------IALTGSRSEIVYRPLPQ 271 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D P R+ D ++ K+ + W P+ ++ GL +T+ ++ Sbjct: 272 DDP---RQRCPDITRAKAMLHWTPKVGLDEGLTRTIAYF 307 >gi|325958621|ref|YP_004290087.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] gi|325330053|gb|ADZ09115.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] Length = 321 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 31/326 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GFIGS + L K V ++D + GN+ ++++ V+ D Sbjct: 12 IVVTGGLGFIGSHISEELCK--KNDVTIVDNES-TGNIKNVQDFQDELSIKIGDVNKLDL 68 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + D +++ AA V RSI TNI GT +L K Sbjct: 69 NDIFEDV-----DYVLHQAALPSVPRSIKDPISSNETNITGTLKVLNAAHETGV-----K 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K F S+ VYG K E MP NP SPY+ TKA+ + + YG+P + Sbjct: 119 KVVFA----SSSSVYGDTPKLPKVETMPINPKSPYAITKATGELYCNIFEEIYGLPTVSL 174 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP P +IP IT + G +YGDG RD+ YV++ V A + Sbjct: 175 RYFNVFGPRQDPNSQYSAVIPKFITAIKNGVSPMVYGDGTQSRDFTYVKNVVNANIKACE 234 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 G +NI + I+ ++ +L+ ++ K+ + +++ RPG D +++ Sbjct: 235 SNNTG-IFNIACGRQI----ILNDLIKILNEIMGKNITPL----YVDPRPG-DINHSLAD 284 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWY 324 K IG+ P+++ + L T+ ++ Sbjct: 285 IKTAKSIGYNPKDDFINELKLTIEFF 310 >gi|299137754|ref|ZP_07030935.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298600395|gb|EFI56552.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 330 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 43/352 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +L++TG AGF+ S L +++ V +D L++ GN+ +L + + F F Q D+CD Sbjct: 3 KLLITGAAGFLASHLVDLMLSR-GYDVTGVDDLSH-GNVQNLDGALRDSRFHFCQADVCD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R + + D +++ AA I T LL ++ + L Sbjct: 61 MSALRHCVDKV--DTVIHLAAYK------------IPRYGTATKTLLVNSQGTMNALQLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHTY 175 + +F+ ST +VYG FSED SP Y+ +K ++LVLA Sbjct: 107 CEKSAKFVITSTSDVYGKNPNVPFSEDADSVLGSPTVGRWAYATSKRYDEHLVLAMAEDC 166 Query: 176 GIPVLLSNCSNNYGPYH------FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 GI + +YGP P+ + AI R + ++GDGQ R + +V D Sbjct: 167 GIYTTVLRIFGSYGPRQNLSWWGGPQSVFIDAILR---DEVIPIHGDGQQTRSFTFVSDT 223 Query: 230 VRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRF--IE 285 VR + + E NIG N E +D+ I + KS S +LI + I Sbjct: 224 VRGIAAAAESSNCNQEIINIGANEEVSILDLASRIYRMCG----KSGSPAIKLIPYDEIA 279 Query: 286 DRPGHD-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYK 336 +R D RR D+ K K + + + +E GL +T+ W W PL + Sbjct: 280 NRKYEDVRRRIPDTRKAKELLNFEAKIPLEQGLLETIAW---QRQWITPLVQ 328 >gi|212704387|ref|ZP_03312515.1| hypothetical protein DESPIG_02442 [Desulfovibrio piger ATCC 29098] gi|212672108|gb|EEB32591.1| hypothetical protein DESPIG_02442 [Desulfovibrio piger ATCC 29098] Length = 318 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG+GF+GS LC L+ D +VL +D ++ ++++E+ + F L+ D+ Sbjct: 6 RVLVTGGSGFLGSHLCARLL-DEGHEVLCVDNF-FSSARSNVEELMDNKRFELLRHDV-- 61 Query: 62 RECIRSALKEF-QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 F + D I N A + + I T + G + L Sbjct: 62 ------TFPLFVEVDEIYNLACPASPVHYQHDPVQTIKTCVHGAINM----------LGL 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R Q ST EVYG D E P S Y K ++ L ++ Sbjct: 106 AKRLKARIFQASTSEVYGDPDVHPQPESYWGHVNPNGIRSCYDEGKRCAEALFFSYRRQN 165 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP P +++ I + ++G + +YGDG R + YV+D V + Sbjct: 166 NVNIKVGRIFNTYGPKMHPNDGRVVSNFIVQALKGEPITIYGDGSQTRSFCYVDDLVECM 225 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 L+ N+G E F I L + +I + S ++LI E PG D Sbjct: 226 CRLMATPDDFTGPVNMGNPGE-------FTIRELAEKVIALTNSSSKLI--CEPLPGDDP 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D S + +GW P+ +E GL KT+ ++ Sbjct: 277 KQRRPDISLAREVLGWEPKVQLEEGLKKTIAYF 309 >gi|332285391|ref|YP_004417302.1| capsular polysaccharide biosynthesis protein [Pusillimonas sp. T7-7] gi|330429344|gb|AEC20678.1| capsular polysaccharide biosynthesis protein [Pusillimonas sp. T7-7] Length = 341 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 28/333 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFLQV 57 +VTG AGFIGS L L+ + +V+ +D G+ +L E+ ++ + F+F++ Sbjct: 20 LVTGCAGFIGSNLLEALLL-MGQKVVGLDNFA-TGHHYNLDEVQKAVSAQQWSNFTFIEG 77 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DICD E + A + D +++ AA V RS+ + NI G +L R Sbjct: 78 DICDLETCKQATQGV--DHVLHQAALGSVPRSLQDPITTNSVNIGGFLNMLVAAR----- 130 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D + Q F+ ++ YG ++ E+ P SPY+ TK ++ + YG Sbjct: 131 ---DAQVQ-SFVYAASSSTYGDHEELPKVEERIGRPLSPYAVTKYVNELYADVFQRAYGF 186 Query: 178 PVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 + N +G P +IP I MI G V + GDG+ RD+ ++++ V+A Sbjct: 187 GSVGLRYFNVFGKRQDPNGAYAAVIPKWIAAMIRGEDVVVNGDGETSRDFCFIDNVVQAN 246 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + + + + YN+ N R +++ +FE +L +L + + + + R G Sbjct: 247 ILASLAQPEGVNQVYNV-AVNARTSLNELFE--YLAQSLGNNGIVYDKQPVYADFRAGDV 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D SK + +G+ P + GL ++ WY Sbjct: 304 RHSQADISKARQLLGYEPMHTIVQGLEVSMPWY 336 >gi|303244409|ref|ZP_07330745.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] gi|302485304|gb|EFL48232.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] Length = 324 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 28/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +++++TGGAGFIGS + +N+ +V+V+D L+ N + + F+ DI Sbjct: 20 VKVLITGGAGFIGSHIVDKFLNN-NHEVVVLDNLSTGNFRNISNNKNNNKNIEFINKDIR 78 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D +++ AA+ +V S+ NI+GT LLE+ R + Sbjct: 79 DNDLNLEGI-----DVVIHHAAQINVRTSVEKPVYDGNINILGTINLLEKIRQY-----D 128 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG E P P PY +K + + + YG+ Sbjct: 129 VKKIIF---ASSGGAVYGEPHYMPVDEKHPVAPLCPYGMSKYCGEEYIKLYNRLYGLNYT 185 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N +G P +I + I ++++ ++GDG RD++YV D A + L Sbjct: 186 ILRYANVFGERQDPMGEAGVISIFIDKIMKNQRPTIFGDGNQTRDFVYVGDVANANLMAL 245 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 E NIG E +++ +F++ I + ++ + + R G R A++ Sbjct: 246 NWKN--EIVNIGTGKE-TSVNELFDV-------IARELNYKYKPIYDKPREGEVYRIALN 295 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 ++ K E+GW P N+E G+ +TV W Sbjct: 296 INRAK-ELGWKPTVNLEEGIKRTVDW 320 >gi|260577230|ref|ZP_05845205.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2] gi|259020539|gb|EEW23860.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2] Length = 347 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 89/357 (24%), Positives = 150/357 (42%), Gaps = 58/357 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL--FSFLQV 57 R+ +TG AGFIG L L+ QV D +T Y +L + F+ + Sbjct: 10 RIFITGTAGFIGYHLAELLLAQ-GAQVQGYDGMTDYYDVSLKHRRHARLRRHPGFAATEA 68 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D + +A+ F PD IV+ AA++ V SI +I NIIG+F ++E R Sbjct: 69 MLEDAAALDAAIDSFAPDVIVHLAAQAGVRYSIDNPRAYIDANIIGSFNVMEAAR----- 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + L ST VYG+ + DMPY + S Y+ATK +++ + A Sbjct: 124 ----RNHVQHLLMASTSSVYGA------NTDMPYAETDKADTQMSFYAATKKATEAMGHA 173 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H +G+P + YGP+ P+ ++ G + +Y +G+ RD+ YV D V Sbjct: 174 FAHLHGLPTTMFRFFTVYGPWGRPDMAYFKFTEAILAGRPIDIYNNGEMWRDFTYVADLV 233 Query: 231 RALYLVLKKGRIGER---------------------YNIGGNNERKNIDIVFEIGFLLDA 269 R + L++ + +R NIG + + + +D + A Sbjct: 234 RGISLLIDA--VPQRPASPAEIEPGDSLSPVAPFRIVNIGNSEKVRLMDFI--------A 283 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I + F+ + G D+S ++ G+ P + G+ V WYL+ Sbjct: 284 AIETALGRKAAYNFMPMQQGDVPATWADASLLQRLTGYKPHTGVGQGIGAFVAWYLE 340 >gi|20560100|gb|AAM27842.1|AF498418_16 ORF_16; similar to NAD dependent epimerase/dehydratase family [Pseudomonas aeruginosa] gi|20560123|gb|AAM27862.1|AF498419_16 ORF_16; similar to NAD dependent epimerase/dehydratase family [Pseudomonas aeruginosa] Length = 318 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D +VL +D + G+ ++ + + F ++ D+ Sbjct: 3 RVMVTGGAGFLGSHLCERLL-DAGNEVLCVDNF-FTGSKRNIAHLMTNPYFELIRHDVTF 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + T++ G + L Sbjct: 61 PLYV-------EVDEIFNLACPASPVHYQFDPVQTLKTSVHGAI----------NVLGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG + E P S Y K ++ L + +G Sbjct: 104 KRVKAKIFQASTSEVYGDPEVHPQPESYWGKVNPIGIRSCYDEGKRCAETLFSDYHRQHG 163 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP P +++ I + + G + +YG+GQ R + YV+D V L Sbjct: 164 VQIKIARIFNTYGPRMHPNDGRVVSNFIVQALRGDDITIYGEGQQTRSFCYVDDLVEGFL 223 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ G I N+G E F I L + ++ S + L+ +D P Sbjct: 224 RLMASDGSITGPINLGNPGE-------FTIRQLAERVLDLVGSSSSLVFKPLPQDDP--- 273 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D S+ K+ +GW P ++ GL+KT+ ++ Sbjct: 274 QQRQPDISQAKAVLGWEPTIMLDEGLSKTITYF 306 >gi|52144803|ref|YP_082027.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus cereus E33L] gi|51978272|gb|AAU19822.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus cereus E33L] Length = 321 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVRR-GYNVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ ++ I L D S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKSIKEVAEVIKKLTD-----SSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E GL +T+ W+ + + Sbjct: 281 EIPNRR--PDVTKLKDLVQFQAKVTWEDGLKETIKWFREED 319 >gi|253574439|ref|ZP_04851780.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846144|gb|EES74151.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 329 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 29/329 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIG + LV + + V+V L GNL E L ++ DI Sbjct: 1 MKVLVTGGAGFIGRHTVKRLVEEGEQVVVVDTGL--PGNLRKKDE-----LVTYYATDIM 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + E +PDA+++ AA++ V RS+ TNI+GT LLE+ C+ Sbjct: 54 SDE-LELIFAEERPDAVIHLAAQTSVRRSLQNPTADAETNILGTIQLLEQ------CIRF 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + S+ VYG+ D E P S Y +K S+ + ++ YG+ Sbjct: 107 GVR---RIVFASSAAVYGNPDHLPIKESQRPEPLSFYGVSKRVSEMYIQSFSERYGLEYS 163 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG + ++ + R+I G + +YGDG RD++YV+D A L Sbjct: 164 ILRYANVYGVREQRTGEDGVLTAFVERLIAGLPLEVYGDGSQTRDFVYVKDIAEANVQAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + N+ + I I+ +G L + S H + +F +PG + +D Sbjct: 224 RCAG-SQIINVSSG---RGISILEALGVLSEI----SGRHVQ-PQFRPAQPGDIDQSVLD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + K++ + W P+ ++ +GL + + + ++ Sbjct: 275 NGKVREILWWEPRYSLYNGLVEMMEFEME 303 >gi|220932900|ref|YP_002509808.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] gi|219994210|gb|ACL70813.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] Length = 328 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 54/334 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + + L + V+ +D L L F++ D+ Sbjct: 1 MNILVTGGAGYIGSHVVKSLF-EAGYNVVTLDNLEKGHREAVLGG-------EFIKGDLK 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + S +K+++ D +++ AA S V S+ ++ N+ LLE + + Sbjct: 53 DRELLDSIMKDYEIDGVIHLAAHSLVGESMENPGKYYKNNVSNGLNLLE------AMVDN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K + ST VYG + +ED P P++ Y +K + ++ + YG+ + Sbjct: 107 DVK---YLVFSSTAAVYGEPREVPITEDHPTAPTNTYGESKLFFEKMMKRYDEIYGLKYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIE-GSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIP+ + + + ++++G DG +RD++ Sbjct: 164 SLRYFNAAGADLSGKIGEDHDPETHLIPIVLQKALGLRDKLYIFGNDYPTRDGTCIRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFE-----IGFLLDALIPKSYS 276 +V D A L L +G YN+G N E ++ V E IG ++A + Sbjct: 224 HVNDLADAHVLAIEGLTRGLESRIYNLG-NGEGYSVKEVIETASRVIGKPIEAGVG---- 278 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + RPG S KIK E+GW PQ Sbjct: 279 --------DRRPGDPAVLVASSDKIKEELGWDPQ 304 >gi|282899925|ref|ZP_06307886.1| UDP-glucose 4-epimerase [Cylindrospermopsis raciborskii CS-505] gi|281195195|gb|EFA70131.1| UDP-glucose 4-epimerase [Cylindrospermopsis raciborskii CS-505] Length = 335 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 41/326 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + L+ D VL++D L Y G+ + ++++ Q L +Q DI D Sbjct: 11 VLVTGGAGYIGSHAVKALLQD-GYHVLILDNLVY-GHRDLVEQVLQVEL---IQGDIQDI 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S + ++ + +++F+A ++V S+ ++ N++ T LLE + Sbjct: 66 PLLNSIFQRYKVEVVMHFSAYAYVGESVTDPAKYYRNNVVATLSLLE---------AMLG 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 ++F+ ST YG +E+ P +P +PY ATK + ++ + YG+ + Sbjct: 117 AGIYKFVFSSTCATYGVPQFIPLTEEHPQHPINPYGATKLMVERILSDFDIAYGLKYVSF 176 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPL + T + + S + ++G DG +RD+++V Sbjct: 177 RYFNAAGADPSGILGEDHNPETHLIPLVLQTALGKRSSISIFGTDYPTPDGTCIRDYIHV 236 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L L+ +G +N+G N +++ + IP I Sbjct: 237 TDLATAHILGLEYLLQGGTSTVFNLGNGNGFSVKEVIAAAKEVTGNNIP--------ITE 288 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 + RPG S K + +GW P Sbjct: 289 CDRRPGDPPILIGSSEKARKILGWQP 314 >gi|296446644|ref|ZP_06888585.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] gi|296255872|gb|EFH02958.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] Length = 327 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L++D +VL +D + G +++ + F L+ D+ Sbjct: 5 RILVTGGAGFLGSHLCERLLDDGH-EVLCVDNF-FTGRRRNIERLFDDRKFELLRHDVTF 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++IG + L Sbjct: 63 PLFV-------EVDEIYNLACPASPIHYQFDPVQTTKTSVIGAI----------NMLGLA 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG E P P + Y K ++ L + + Sbjct: 106 KRLRVKVFQASTSEVYGDPTVHPQPESYWGHVNPLGPRACYDEGKRCAETLFFDYHRQHR 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P+ +++ I + ++ + +YG+GQ R + YV+D +R Sbjct: 166 LKIKVARIFNTYGPRMHPKDGRVVSNFIVQALQNQPITVYGEGQQTRSFCYVDDLIRGFV 225 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ + NIG E F I L + +I + S + L+ E P D + Sbjct: 226 ALMDAPDAVTGPINIGNPTE-------FTIRQLAETVIDLTGSRSPLV--FEPLPADDPK 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S + +GW P + GL +T+ ++ Sbjct: 277 QRRPDISAAERLLGWRPTIALREGLVRTIAYF 308 >gi|296455001|ref|YP_003662145.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium longum subsp. longum JDM301] gi|296184433|gb|ADH01315.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium longum subsp. longum JDM301] Length = 243 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 14/134 (10%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ + + + V+DKLTYAGN ++ + S + + DICD Sbjct: 57 ILVTGGCGFIGANFVRYVARSHPHVHITVLDKLTYAGNPENIAGLPPSQV-DLVVGDICD 115 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 116 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 164 Query: 122 KKDQFRFLQISTDE 135 K RF IST E Sbjct: 165 -KHDVRFHHISTGE 177 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 + H + DRPGHDRRYAID+S++++E+GW P + SGL + WY ++ WW P Sbjct: 170 FHHISTGENVRDRPGHDRRYAIDASRLRAELGWSPMHTDFASGLRNVIDWYAEHRDWWAP 229 >gi|291515001|emb|CBK64211.1| Nucleoside-diphosphate-sugar epimerases [Alistipes shahii WAL 8301] Length = 324 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/331 (26%), Positives = 140/331 (42%), Gaps = 27/331 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTGGAGFIGS LC ++N L ++ +D L+ N + N + F+Q DI D Sbjct: 14 FLVTGGAGFIGSNLCEAILN-LGYRIRCLDDLSTGKQANIDLFLGHPN-YEFIQGDIKDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A K D +++ AA V RS+ + NI GT +LE R + Sbjct: 72 QTCIDACKNV--DYVLHQAAWGSVPRSLEMPLFYSLNNIQGTLNMLEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ S+ VYG E N SPY+ TK + + YG+ Sbjct: 121 NGVKKFVYASSSSVYGDEPVLPKEEGHEGNLLSPYAVTKRCDEEWAKQYTRHYGLDTYGM 180 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 N +G P+ ++P I ++ + GDG+ RD+ Y+E+ + A L L Sbjct: 181 RYFNVFGRRQDPDGAYAAVLPKFIKMLLNNEQPTINGDGRQSRDFTYIENVIEANLKACL 240 Query: 238 KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G+ +NI IDI + +L I F DR G + Sbjct: 241 ASTEAAGKAFNIAYGGREYLIDIYHTLTRVLGKNIEP--------HFGPDRKGDIKHSNA 292 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D S+ + +G+ P+ + GL +++ WY +N Sbjct: 293 DISQARKLLGYDPEYDFARGLAESIEWYKNN 323 >gi|317052434|ref|YP_004113550.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5] gi|316947518|gb|ADU66994.1| NAD-dependent epimerase/dehydratase [Desulfurispirillum indicum S5] Length = 343 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 32/337 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQV 57 MR++V+GGAGFIG L L+ + + V V+D + L +L+ L Sbjct: 1 MRVLVSGGAGFIGLHLLETLLEQEQHLHVSVLDDFSSGSREQLENLQNRHHQRLRLIEGT 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 C + C+++ + AIV+ A +S S+ +I G+ L+W+ Sbjct: 61 VTCPQTCMQACSGQ---QAIVHLARQSCAPHSLTDPFPSAAIHIQGSL------NLFWAA 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q + + S+ +VYG +E+ P +PY ++ + + Y I Sbjct: 112 YRQGVG---KIVYASSHKVYGDSSAVPLAENSLGKPLTPYGVSRYTCELYAGLMHRQYHI 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI----EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 P + N YGP + P +T +I + ++G+G D++YV D V AL Sbjct: 169 PTVGLRFFNVYGPGQIWGEQGPALVTSLIAHLSQAQEPIIFGNGNQSCDFVYVNDAVSAL 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL-----LDALIPKSYSHTELIRFIEDRP 288 L + YN+G +I E+ + L+A IP R + RP Sbjct: 229 TAALHRDIPAGEYNVGSGQRFSVNEICEELQTILKRRGLNADIPP--------RHLPQRP 280 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G ++ +E+G+ + ++ GL KTV W++ Sbjct: 281 GDMHHGLAHTALAAAELGYSARTSLADGLEKTVQWFV 317 >gi|315283601|ref|ZP_07871748.1| UDP-glucose 4-epimerase [Listeria marthii FSL S4-120] gi|313612757|gb|EFR86752.1| UDP-glucose 4-epimerase [Listeria marthii FSL S4-120] Length = 327 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MSIVVLGGAGYIGSHAVDELITR-GYEVVVIDNLR-TGHKESIHKEAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ D +++FAA S V S+ E++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKETVDGVIHFAASSLVGESMEVPLEYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGDTKLIMEKMMKWCDKAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KFVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H+RAL LK G +N+G +N F + +L+A + + Sbjct: 222 DYVQVEDLIDAHIRALEY-LKNGGESNVFNLGSSNG-------FSVKEMLEA--ARVVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|114567456|ref|YP_754610.1| UDP-glucose 4-epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338391|gb|ABI69239.1| UDP-glucose 4-epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 302 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 144/326 (44%), Gaps = 29/326 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFI S +C L+++ +V+VID L+ G L L + F Q+D+C Sbjct: 1 MKILLTGGAGFIASHICDRLISEGH-EVVVIDNLS-TGRLELLNPRAY-----FYQLDLC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I + +P+ +++ AA+ V S NIIG+ L E R + + Sbjct: 54 D-PAIALVFQIEKPELVIHHAAQVSVSNSQENPVFDAVNNIIGSLNLYENCRQY-----K 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK + S+ +YG E P P S Y +K ++ + + +G+ Sbjct: 108 VKK----IIYASSAAIYGEPLYLGIDEKHPVKPLSFYGLSKYLAEIYLRYYAGLFGLKFT 163 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YGP + +I + ++ +++G ++G G+ RD++YV D V A L Sbjct: 164 ILRYANVYGPRQRSDGEGGVIAIFLSSLLKGEAPMIFGQGEQSRDFIYVADIVEANIQAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + E N+G E + I LL + + Y + +RPG D Sbjct: 224 TRAE-NEVLNLGTGKELSINQLYASIEALLCSQLQPVY--------VPERPGDIMHSYFD 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 K + W ++ GL KT+ + Sbjct: 275 QRKAAELLDWKASYPLQEGLRKTIEY 300 >gi|51598699|ref|YP_072887.1| nucleotide sugar epimerase [Borrelia garinii PBi] gi|51573270|gb|AAU07295.1| nucleotide sugar epimerase [Borrelia garinii PBi] Length = 355 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/361 (22%), Positives = 159/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVND---------------LKIQVLVIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV + LK + ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEEGHEVLGVDILNDYYELKFKNERLEALGFCPKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + KE++ + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSKKYNNLSFAYLDILNKDKLLKLFKEYKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIKHFVYASTSSVYGINENIPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + + ++ +G R Sbjct: 174 KSNEMIAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNCEPINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVSDIANGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFIREL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDIVKLKNDVGYEAKISIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|150019231|ref|YP_001311485.1| UDP-glucose 4-epimerase [Clostridium beijerinckii NCIMB 8052] gi|149905696|gb|ABR36529.1| UDP-glucose 4-epimerase [Clostridium beijerinckii NCIMB 8052] Length = 330 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 155/351 (44%), Gaps = 52/351 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV K V+++D L +G++ ++ ++ F + DI Sbjct: 1 MSILVCGGAGYIGSHTVHELVKQNK-DVIIVDNLQ-SGHMKAVNPKAK-----FYKGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + E + DAI++FAA S V S++ + N+ G ILLE S Sbjct: 54 DSEFLDKVFSENKIDAIIHFAANSLVGESMVKPLLYFNNNVYGMQILLE---------SM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D + ST VYG K SED NP++ Y TK + + ++ GI + Sbjct: 105 VKHDIKNIVFSSTAAVYGEPKKIPISEDDETNPTNTYGETKLTMEKMMKWVSKANGINYV 164 Query: 181 LSNCSNNYGPY--------HFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 N G H PE LIPL + + + + ++G DG +RD++ Sbjct: 165 SLRYFNAAGALEDGSIGEDHSPESHLIPLILQVPLGKREAITVFGEDYDTPDGTCIRDYI 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +V D H++A+ L+ G +N+G IGF + +I + T E Sbjct: 225 HVLDLADAHIKAVEY-LQSGNKSNIFNLGNG-----------IGFSVKEMIDSAKEATSE 272 Query: 280 LIRFI--EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV-CWYLDN 327 I+ + E R G R + K + +GW P+ + KT W+ +N Sbjct: 273 EIKVVVGERRAGDPARLIASNEKAQKILGWTPKYTDVKAIIKTAWTWHKNN 323 >gi|166365732|ref|YP_001658005.1| GDP-mannose 4,6-dehydratase [Microcystis aeruginosa NIES-843] gi|166088105|dbj|BAG02813.1| GDP-mannose 4,6-dehydratase [Microcystis aeruginosa NIES-843] Length = 360 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 24/332 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ QV I + T N + + I Q + FL Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYQVHGIIRRTSTFNTDRIDHIYTDPHQPDTKLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L++ QP + N A+SHV S + + +G LLE R + Sbjct: 65 GDLTDGTTLRRILEQVQPVEVYNLGAQSHVRVSFDAPEYTVDAVGVGVLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q + E++G + + E P+ P SPY+ K + + + +Y Sbjct: 123 --QKRTGIEVRFYQAGSSEMFGKVMEVPQKETTPFYPRSPYACAKVYGHWQTVNYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ R+I G LY G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRALARIIAGQQKKLYLGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGH 290 ++L+L++ + + NE +I +I F L + Y + F E RP Sbjct: 241 MWLMLQQQEPDD--YVVATNETYSIREFLDISFQYVNLNWQDY-----VEFDERYLRPAE 293 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 DS+K + ++GW P E GL K + Sbjct: 294 VDLLIGDSTKAREKLGWQPSVTFE-GLVKLMV 324 >gi|253701996|ref|YP_003023185.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21] gi|251776846|gb|ACT19427.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M21] Length = 336 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/360 (26%), Positives = 162/360 (45%), Gaps = 65/360 (18%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL----- 51 +++VTG AGFIG L L+ +V+ +D NLN +LKE S L Sbjct: 3 KILVTGAAGFIGFHLSEKLLAK-GCEVVGLD------NLNDYYEVALKEGRLSRLEGKPG 55 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F ++++ DRE I+ + D++VN AA++ V SI +I +N+ G +LE Sbjct: 56 FRFARMNLEDREGIKELFAAEKFDSVVNLAAQAGVRYSIENPYVYIDSNLSGFINILEGC 115 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASS 164 R +K + S+ VYG+ + MP+ +P S Y+ATK ++ Sbjct: 116 R-------HNKVGHLVY--ASSSSVYGA------NTTMPFSVHHNVDHPVSLYAATKKAN 160 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 + + + YG+P YGP+ P+ + L ++EG + ++ G+ RD+ Sbjct: 161 ELMAHTYSSLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNYGKMQRDFT 220 Query: 225 YVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFL 266 +++D V + V+ G+ YNIG NN ++++ I L Sbjct: 221 FIDDIVEGVARVIDSVPAGDPGWSGANPDPGTSYAPYKIYNIGNNNP---VELMRFIEVL 277 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 AL ++ + I+ D P YA D + ++G+ P ++E G+ + V WY D Sbjct: 278 EKALGKEAQKNLLPIQ-AGDVPA---TYA-DVDDLMRDVGFKPATSIEDGIARFVAWYRD 332 >gi|30260666|ref|NP_843043.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Ames] gi|47525777|ref|YP_017126.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183507|ref|YP_026759.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Sterne] gi|65317925|ref|ZP_00390884.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus anthracis str. A2012] gi|165870675|ref|ZP_02215328.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0488] gi|167634741|ref|ZP_02393060.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0442] gi|167640823|ref|ZP_02399082.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0193] gi|170688629|ref|ZP_02879835.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0465] gi|170707194|ref|ZP_02897650.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0389] gi|177655138|ref|ZP_02936768.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0174] gi|190568169|ref|ZP_03021078.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis Tsiankovskii-I] gi|196040063|ref|ZP_03107365.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus NVH0597-99] gi|218901646|ref|YP_002449480.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH820] gi|227816621|ref|YP_002816630.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. CDC 684] gi|229600428|ref|YP_002865110.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0248] gi|254686895|ref|ZP_05150753.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. CNEVA-9066] gi|254725975|ref|ZP_05187757.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A1055] gi|254738878|ref|ZP_05196580.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Western North America USA6153] gi|254743738|ref|ZP_05201423.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Kruger B] gi|254756277|ref|ZP_05208306.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Vollum] gi|254762096|ref|ZP_05213945.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Australia 94] gi|301052161|ref|YP_003790372.1| UDP-glucose 4-epimerase [Bacillus anthracis CI] gi|30254034|gb|AAP24529.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Ames] gi|47500925|gb|AAT29601.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177434|gb|AAT52810.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. Sterne] gi|164713509|gb|EDR19033.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0488] gi|167511217|gb|EDR86604.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0193] gi|167529815|gb|EDR92563.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0442] gi|170127972|gb|EDS96843.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0389] gi|170667489|gb|EDT18246.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0465] gi|172080287|gb|EDT65377.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0174] gi|190560661|gb|EDV14637.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis Tsiankovskii-I] gi|196028918|gb|EDX67523.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus NVH0597-99] gi|218538782|gb|ACK91180.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH820] gi|227006027|gb|ACP15770.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. CDC 684] gi|229264836|gb|ACQ46473.1| NAD-dependent epimerase/dehydratase family protein [Bacillus anthracis str. A0248] gi|300374330|gb|ADK03234.1| UDP-glucose 4-epimerase [Bacillus cereus biovar anthracis str. CI] Length = 321 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVGR-GYNVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVFA----STSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ ++ I L D S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKSIKEVAEVIKKLTD-----SSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E GL +T+ W+ + + Sbjct: 281 EIPNRR--PDVTKLKDLVQFQAKVTWEDGLKETIKWFREED 319 >gi|171059744|ref|YP_001792093.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] gi|170777189|gb|ACB35328.1| NAD-dependent epimerase/dehydratase [Leptothrix cholodnii SP-6] Length = 343 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 33/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFL 55 R +VTG AGFIGS L L+ + QV +D G+ ++L+ + +S F+ Sbjct: 18 RWLVTGSAGFIGSHLLETLLAHGQ-QVTSLDNFA-TGHRHNLQAVRESVGEAAWARHHFI 75 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + DI D + +A + Q +++ AA V RS+ N G +L R Sbjct: 76 EGDIADPDTCVAACEGAQ--FVLHQAALGSVPRSLKDPQTTHRANATGFLNMLVAARDVG 133 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ ++ YG ED+ P SPY+ TK ++ +G Y Sbjct: 134 A----------RFVYAASSSTYGDSPTLPKVEDVIGRPLSPYAVTKYLNELYAEVFGRCY 183 Query: 176 GIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + N +GP P +IP I M+ G + GDG+ RD+ Y+ + V+ Sbjct: 184 GMQTIGLRYFNVFGPRQDPNGAYAAVIPRWIAAMLRGEPCTINGDGETSRDFCYIANTVQ 243 Query: 232 A---LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIED 286 A L + + + YN+ +R ++ ++ L A + + ++ + + + Sbjct: 244 ANLRAALATQDAAVNQVYNV-AVGDRTTLN---QLHAALAAGVERERPSLQVAQPAYADF 299 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R G R D SK ++ +G+ P ++ GL + + WY+ N Sbjct: 300 RGGDVRHSLADVSKARTLLGYEPTHDVHEGLAEAIAWYVAN 340 >gi|227878985|ref|ZP_03996885.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256849690|ref|ZP_05555121.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|262046739|ref|ZP_06019700.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] gi|227861423|gb|EEJ69042.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256713179|gb|EEU28169.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|260573188|gb|EEX29747.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] Length = 330 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 143/331 (43%), Gaps = 45/331 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS R LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGN-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL+ Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P +P +PY TK + ++AW GI Sbjct: 106 DAGVKYLVFS-SSAATYGIPKKLPITEDTPLDPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFLY-------GDGQNVRDW 223 V + G H PE LIP + I G F DG NVRD+ Sbjct: 164 TALRYFNVAGAASDGTIGEDHAPETHLIPNILKSAISGDGKFTIFCDDYDTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 + VED + A L LK + + +N+G N++I+ + IP + Sbjct: 224 VQVEDLIDAHILALKHMMETNKSDVFNLGTAQGYSNLEILNAAKKVTGIDIPYTMG---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 R G DS+K ++ +GW P+ Sbjct: 280 ----PRRGGDPDSLVADSTKARTILGWKPKH 306 >gi|323650603|gb|ADX97399.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis] Length = 371 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 40/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 + ++TG G GS L +L+ QV I + + + N + I+Q+ +S Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYQVHGIKRRSSSFNTQRIDHIAQNGKYSSENFILHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L+E +PD + N A+SHV S + + +GT LLE R Sbjct: 62 GDLTDSSNLTRLLEEIKPDEVYNLGAQSHVAVSFDSPEYTADVDAMGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK +F Q ST E+YG + + E P++P SPY+ K + ++ + + YG Sbjct: 119 -LGLEKKT--KFYQASTSELYGLVQEIPQKETTPFHPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI----EGSHVFLY-GDGQNVRDWLYVEDHVR 231 I N+ P E + ITR++ +G L+ G+ ++RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRR-GETFVTRKITRVLANISQGLESCLHLGNLDSLRDWGHAKDYVR 234 Query: 232 ALYLVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +L+L++ +I R + I++ F+ + + I KS + E+ Sbjct: 235 MQWLMLQQDHPEDFVIATGKQISVREFVRMAASELGIELEFKGAGIDEIGIVKSIKNNEV 294 Query: 281 IRF-IED----------RPGHDRRYAIDSSKIKSEIGWFPQ 310 I + D RP D SK K+++GW P+ Sbjct: 295 IAVNVGDIIVKVDPKYFRPAEVETLLGDPSKAKNKLGWEPE 335 >gi|189466288|ref|ZP_03015073.1| hypothetical protein BACINT_02662 [Bacteroides intestinalis DSM 17393] gi|189434552|gb|EDV03537.1| hypothetical protein BACINT_02662 [Bacteroides intestinalis DSM 17393] Length = 339 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 41/340 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ--VLVIDKLTY---AGNLNSLKEISQSNLFSFL 55 +R+++ G GFIG+ + +++ + L Q V+V D+ +NS+ ++ ++ S L Sbjct: 28 IRILILGAFGFIGTNILKFIDDYLSGQYEVVVFDRTNKHPKGVEINSISKVYTGDITSTL 87 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ R E + D +++ + V + I TN+I T LLE + + Sbjct: 88 DIENIFR-------NEAEFDVVLHLVTTT-VPAASNDYRYDIETNLISTIQLLEMCKKY- 138 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + +L S +YG + SE+ P S Y TK + + + + + Sbjct: 139 ------KAHKIIYLS-SGGAIYGDMANA-HSENQVAKPISSYGITKLAVENYMYLYKRLF 190 Query: 176 GIPVLLSNCSNNYGPYHFPEK--LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + L+ SN YGPYH+ K +I +AI + + G + ++GDG +D++Y+ED R L Sbjct: 191 DLDYLIVRLSNPYGPYHYSTKQGVINIAIQKALRGEKLSIWGDGTGCKDYIYIEDFCRIL 250 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI-EDRPGHDR 292 ++++ E NIG + DIV I H +L F E H Sbjct: 251 FILINMNYKNEIVNIGSGSVYSLNDIVETI-------------HKQLPSFGWEYTCCHQS 297 Query: 293 ---RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 + +D SK+ S IG + G++KT+ W+ DN + Sbjct: 298 DVVDFTLDISKLLSIIGDMRFIALAEGISKTLAWHKDNKF 337 >gi|218532389|ref|YP_002423205.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|240140949|ref|YP_002965429.1| putative sugar nucleotide dehydratase [Methylobacterium extorquens AM1] gi|254563459|ref|YP_003070554.1| sugar nucleotide dehydratase [Methylobacterium extorquens DM4] gi|218524692|gb|ACK85277.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|240010926|gb|ACS42152.1| putative sugar nucleotide dehydratase [Methylobacterium extorquens AM1] gi|254270737|emb|CAX26742.1| putative sugar nucleotide dehydratase [Methylobacterium extorquens DM4] Length = 333 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 51/339 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G+ ++L + + F ++ D+ Sbjct: 4 RILVTGGAGFVGSHLCDRLVAQGH-DVLAVDNF-YTGDRSNLAQHLSNPRFEVMRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++IG + L Sbjct: 60 -----TFPLYVEVDEIYNLACPASPIHYQRDPV---QTTKTSVIGAI----------NML 101 Query: 119 SQDKKDQFRFLQISTDEVYGSLD--------KGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K+ LQ ST E+YG D +GL S P + Y K ++ L Sbjct: 102 GLAKRLGIPILQASTSEIYGDPDVHPQPEDYRGLVSVS---GPRACYDEGKRCAETLFFD 158 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + + +P+ ++ N YGP + +++ + + + G + LYGDG+ R + +V+D Sbjct: 159 YQRRHHVPIRVARIFNTYGPRMNRDDGRVVSNFVVQALRGEPITLYGDGRQTRAFCFVDD 218 Query: 229 HVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIE 285 V L ++ +G + N+G E +I I I + S +E++ + Sbjct: 219 LVEGLMRLMNVEGTLDGAVNLGNPTEVTIAEIAHRI-------IALTGSRSEIVYRPLPQ 271 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D P R+ D ++ K+ + W P+ ++ GL +T+ ++ Sbjct: 272 DDP---RQRCPDITRAKAMLHWTPKVGLDEGLTRTIAYF 307 >gi|153938971|ref|YP_001391393.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|152934867|gb|ABS40365.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|295319423|gb|ADF99800.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. 230613] Length = 307 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSNVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG + E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPEYLPIDEGHGIRPISYYGLSKYTAEEYIRVFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISTFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG ++ ++D + KS I + R G + Sbjct: 224 SSGG-KERFNIGTGVYTSVKELAEN---MIDIIDLKSN-----IEYASARKGDIANSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLKKTIEYYKNN 304 >gi|126462932|ref|YP_001044046.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|126104596|gb|ABN77274.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] Length = 672 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 46/353 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L++D + +V+++D L AG ++L+ + + V R+ Sbjct: 320 VITGGAGFIGSNLADALLSDGE-EVILLDNLGRAGVEDNLRWLKARHGERLHPVIADLRD 378 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 A A+ + A ++ V S+ N GT LLE R Sbjct: 379 ERAMADAARDAAAVYHLAGQTAVTTSLESPVADFEINARGTLNLLEAIRA--------TG 430 Query: 124 DQFRFLQISTDEVYGSLD------------------KGLFSEDMPYNPSSPYSATKASSD 165 L ST++VYG+L+ E P + +PY +K +D Sbjct: 431 RPVPLLFASTNKVYGALEDLEMQPGERHVPADPEILAHGIGEGRPLDFCTPYGCSKGVAD 490 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRD 222 V+ + ++G+ + S YGP F + + + R ++G + ++G+G+ VRD Sbjct: 491 QYVIDYAKSFGLSTAVLRMSCIYGPRQFGTEDQGWVAHFLIRALKGKGISVFGNGRQVRD 550 Query: 223 WLYVEDHV---RALYLVLKKGRI-GERYNIGGN--NERKNIDIVFEIGFLLDALIPKSYS 276 L+V D V R L + GR+ + +N+GG N ++ EIG L + + Sbjct: 551 VLHVSDAVAAYRRLMAEVSAGRVRSQAFNLGGGPANAVSLRQVLEEIGHLTGGPV----T 606 Query: 277 HTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 TE ED R G + D+ + + IGW P GL W ++ Sbjct: 607 VTE-----EDWRQGDQLWFVADTRALGAAIGWAPTVGWREGLAGLAAWLAEHR 654 >gi|223888989|ref|ZP_03623580.1| hypothetical protein BBU64B_0453 [Borrelia burgdorferi 64b] gi|223885805|gb|EEF56904.1| hypothetical protein BBU64B_0453 [Borrelia burgdorferi 64b] Length = 355 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 85/361 (23%), Positives = 159/361 (44%), Gaps = 52/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVND----LKIQVL-----------VIDKLTYAGNLNSLKE 45 M++ +TG AGFIG + + LV L I VL ++ L + + Sbjct: 1 MKIFLTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYEPKFKHERLEALGFCSKDVKTHK 60 Query: 46 ISQS---NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 I +S N SF +DI +++ + K+ + + + AA++ + S+ D +++ NI+ Sbjct: 61 IIKSEKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATK 161 G F +L+ R++ K++ F+ ST VYG + SED + +P + Y+A+K Sbjct: 121 GFFNVLDVCRVY-------KENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASK 173 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + A+ ++ IP YG Y P+ + L + G + ++ +G R Sbjct: 174 KSNEMMAHAYSASFNIPTTGLRFFTVYGTYGRPDMALYLFSDGIKNGKAINIFNNGNMAR 233 Query: 222 DWLYVEDHVRALYLVLKKGRIGE------------------RYNIGGNNERKNIDIVFEI 263 D+ YV D +Y VLK + YNIG + K +D + E+ Sbjct: 234 DFTYVGDIADGVYKVLKNPAKSDCNFDVKNPNSSTSSFPYRIYNIGTGHATKLLDFISEL 293 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D K+Y + +E D K+K+++G+ + +++ G+ + W Sbjct: 294 EANFDKKALKNYMPMQKADVVES--------CCDILKLKNDVGYEAKVSIKEGIKEFSQW 345 Query: 324 Y 324 Y Sbjct: 346 Y 346 >gi|260469613|ref|ZP_05813778.1| UDP-glucose 4-epimerase [Mesorhizobium opportunistum WSM2075] gi|259028639|gb|EEW29950.1| UDP-glucose 4-epimerase [Mesorhizobium opportunistum WSM2075] Length = 342 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 48/329 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAGFIGS C+ L + V D L GN S+ L+ L V DI D Sbjct: 6 ILVTGGAGFIGSHTCKLLAAAGYLPV-AFDNLCR-GNEKSV-------LWGPLVVGDIRD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ +++A+ +P AI++FAA ++V S+ ++ +TN++GT +L+ R + Sbjct: 57 RDALQAAIAAHRPTAIIHFAALAYVGESVQEPADYYSTNVMGTIAVLDAAR-------AN 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F S+ YG + E NP SPY TK + ++ + YG+ + Sbjct: 110 SIENIIFS--SSCATYGVPEALPVRESSSQNPISPYGRTKLMGEQIIGDYASAYGMKFAI 167 Query: 182 --------SNCSNNYGPYHFPEK-LIP---LAITRMIEGSHVFL----YGDGQNVRDWLY 225 ++ G +H PE L+P +A + +I+ VF DG VRD+++ Sbjct: 168 LRYFNACGADPDGELGEWHSPETHLVPRVLMAASGIIDEIEVFGTDYNTSDGTCVRDYIH 227 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D H++AL L++G N+G +IV + + +P Sbjct: 228 VSDLARAHLKALEY-LERGGQSLAVNLGTGRGVSIKEIVQTVSRVTSRPVPAV------- 279 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 F RPG D + +G+ P+ Sbjct: 280 -FRARRPGDPAELYADPGNAREHLGFVPE 307 >gi|154414807|ref|XP_001580430.1| galactose epimerase [Trichomonas vaginalis G3] gi|121914647|gb|EAY19444.1| galactose epimerase, putative [Trichomonas vaginalis G3] Length = 340 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 164/358 (45%), Gaps = 45/358 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M +++TGGAG+IGS L + + +V D L+ + + SLK +S+ + F++ D Sbjct: 1 MTILITGGAGYIGSHTLIEL-SKVGYDFVVFDNLSNSCD-ESLKRVSKLINKDVKFVKGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR +++ ++++PD++++FA V S++ E+ N+ GT +LL+ R ++C Sbjct: 59 IRDRAALKACFEQYKPDSVIHFAGLKAVGESVVKPIEYYDNNVNGTLVLLDVMR-EYNC- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-PYSATKASSDYLVL-AWGHTYG 176 KK F S+ VYG+ + L ED P ++ PY +K + ++ + Sbjct: 117 ---KKIIFS----SSATVYGNPNAPLIKEDFPVGGTTNPYGTSKYFIERILQDCYVADNK 169 Query: 177 IPVLLSNCSNNYGPYH----------FPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 + ++L N G + P L+P ++ + + H+ ++G DG Sbjct: 170 MQIVLLRYFNPVGAHESGMIGEDSSGIPNNLMPYISQVAVRKRPHLNVFGNDYPTRDGTG 229 Query: 220 VRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+L+V D HV+AL YL G N+G N +++V + IP Sbjct: 230 VRDYLHVVDLAIGHVKALDYLNAHPGSKPLIVNLGTGNGCSVLELVHAFEKVNGIEIP-- 287 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + ++ RPG D S K +GW + +E + + W N +R Sbjct: 288 ------YKIVDRRPGDLPTVVADPSYAKEVLGWTATKTIEDMVRDSWNWQSHNPNGYR 339 >gi|238064606|ref|ZP_04609315.1| epimerase [Micromonospora sp. ATCC 39149] gi|237886417|gb|EEP75245.1| epimerase [Micromonospora sp. ATCC 39149] Length = 319 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 152/341 (44%), Gaps = 50/341 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------QSNLFSFL 55 R +VTGGAGFIG L R L++D +QV V+D + + L ++ + +L + L Sbjct: 4 RALVTGGAGFIGLHLVRRLLDD-GVQVTVLDDFSRGADDPDLHALTGDVHLVRHDLTTPL 62 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D L F DA+ + A V R + TN++ T LL+ W Sbjct: 63 PTD----------LDRF--DAVYHLAGVVGVQRVTDRPVHTMRTNVLATVSLLD-----W 105 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGL----FSEDMPY---NPSSP---YSATKASSD 165 +Q FL +++ G+ GL ED P+ P SP Y+ +K ++ Sbjct: 106 CARTQPG---VLFLSSTSEVGDGAATAGLAELPVPEDAPFVLCEPRSPRTSYALSKLVAE 162 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWL 224 YL L G + V + N YGP E ++P I R + G+ F LYG G+ R + Sbjct: 163 YLFLHAGPPSRVRV--ARFYNVYGPRMGSEHVVPQLIERALAGTDPFPLYG-GRQTRAFC 219 Query: 225 YVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +V+D V A+ + G NIG N+R+ ++I ++ + AL + +H E Sbjct: 220 HVDDAVEAMLRLCAVPEPGPLVVNIG--NDREEVEI-LDLARRICAL---AGTHPEFA-- 271 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + PG RR D + ++ G+ P ++ GL T WY Sbjct: 272 VRPAPGGPRRRLPDLTLLRGLTGYEPAVALDVGLRSTFDWY 312 >gi|21326465|ref|NP_647552.1| UDP-glucuronic acid decarboxylase 1 [Rattus norvegicus] gi|21306285|gb|AAM45939.1|AF482705_1 UDP-glucuronate decarboxylase [Rattus norvegicus] Length = 420 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-DVSVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAELIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 362 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391 >gi|332529491|ref|ZP_08405449.1| UDP-glucuronic acid epimerase protein [Hylemonella gracilis ATCC 19624] gi|332041011|gb|EGI77379.1| UDP-glucuronic acid epimerase protein [Hylemonella gracilis ATCC 19624] Length = 352 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 124/241 (51%), Gaps = 16/241 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV--DI 59 ++TG AGFIG L R L+ + V+ D +T Y L + S F V + Sbjct: 18 LITGTAGFIGFHLARRLLQEGH-SVVGFDGMTKYYDPRLKERRHAILSEFGEFTPVIGML 76 Query: 60 CDRECI-RSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+ + ++A + +P+ IV+ AA++ V S+ ++ +N+IGT+ +LE L Sbjct: 77 EDKVALEQAAAIQGKPEVIVHLAAQAGVRYSLENPKAYVDSNLIGTWNILE--------L 128 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ + + L ST +YG+ +K F+E D P + Y+ATK S + + ++ H Y I Sbjct: 129 AKEHRPE-HLLLASTSSIYGANEKIPFAETDRADEPLTLYAATKKSGELMAHSYAHLYKI 187 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + + +++G + +YG+G+ RD+ Y++D + + ++ Sbjct: 188 PTTAFRFFTVYGPWGRPDMALFKFVDSILKGKPIDVYGEGRMSRDFTYIDDLIEGIVRLM 247 Query: 238 K 238 + Sbjct: 248 R 248 >gi|220905657|ref|YP_002480968.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7425] gi|219862268|gb|ACL42607.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7425] Length = 358 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 19/317 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQV 57 R ++TG G GS L L+ + +V I + T N + + + Q FL Sbjct: 6 RALITGITGQDGSYLTELLLGE-GYEVHGIIRRTSTFNTDRIDHVYQDPHLEDTRLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R ++ QP I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRIVEAIQPQEIYNLGAQSHVRVSFDSPEYTVDSVGLGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q ++ RF Q + E++G + E P+ P SPY+ K + + + + +Y Sbjct: 123 --QQRTGNEVRFYQAGSSEMFGLVQAVPQHETTPFYPRSPYACAKVYAHWQTVNYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I +A+ R++ G LY G+ RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITMAVARIVAGVQKKLYLGNLDAKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + Y I E ++ E+ F L + Y + R++ RP Sbjct: 241 MWLMLQQ-ESPDDYVI-ATGETHSVREFLELAFGYVNLNWQDYVEFDQ-RYL--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFP 309 DS+K + ++GW P Sbjct: 296 LLIGDSTKAQQKLGWRP 312 >gi|149174382|ref|ZP_01853009.1| NAD-dependent epimerase/dehydratase family protein [Planctomyces maris DSM 8797] gi|148846927|gb|EDL61263.1| NAD-dependent epimerase/dehydratase family protein [Planctomyces maris DSM 8797] Length = 314 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 36/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ + +V+ +D ++G+ ++ + F ++ DI Sbjct: 4 VLVTGGAGFLGSHLCDRLIEQGR-EVICLDNF-FSGSKRNIAHLIGHPRFELIRHDIVHP 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + I N A + + I T+ +G + L K Sbjct: 62 FYLEVS-------EIYNLACPASPVAYQYNPIKTIKTSSVGMV----------NVLGLAK 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + L ST EVYG + E+ P P S Y K ++ L + + + + Sbjct: 105 RCRAKVLHASTSEVYGDPEVHPQVEEYWGNVNPLGPRSCYDEGKRIAESLCINYHQAHEV 164 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P+ + N YGP P ++I I + + G + +YGDGQ R + YV+D + Sbjct: 165 PIRIVRIFNTYGPRMDPNDGRVISNFINQALRGEPLTIYGDGQQTRSFCYVDDLIEGFLR 224 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RRY 294 ++ + N+G E ++ L A+I S +EL+ E P D ++ Sbjct: 225 MMNQEETTGPVNLGNPVENTMLE-------LAQAVIKSVNSESELVH--ETLPTDDPKQR 275 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + + W P+ ++ GL KTV +Y Sbjct: 276 CPDISKARKFLKWEPEVALKDGLAKTVEYY 305 >gi|125972710|ref|YP_001036620.1| UDP-galactose 4-epimerase [Clostridium thermocellum ATCC 27405] gi|256004869|ref|ZP_05429843.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 2360] gi|125712935|gb|ABN51427.1| UDP-galactose 4-epimerase [Clostridium thermocellum ATCC 27405] gi|255991179|gb|EEU01287.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 2360] Length = 354 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 51/350 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++VTGGAG+IGS LV + K +V+V+D L G+ +++ + D+ Sbjct: 26 VAVLVTGGAGYIGSHTVAELV-EKKEEVIVVDNLE-KGHRDAVAGAK------LIVGDLR 77 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E ++ E +A+++FAA V S+ ++ N+I T LL + + + Sbjct: 78 DKEFVKKVFLENDIEAVIHFAAYIEVGESVQNPLKYYNNNVIATLNLL-------TAMEE 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K D+ F ST YG + E P++PY TK + + + YGI + Sbjct: 131 AKVDKIVFS--STAATYGEPENIPILETDRTLPTNPYGETKLAVEKALKWCDRAYGIKYI 188 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL I + + + ++G DG +RD++ Sbjct: 189 ALRYFNASGAHESGEIGEDHSPESHLIPLVIQAALGKRESIKIFGNDYNTPDGTCIRDYI 248 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L++ R G+ YN+G GF + +I T Sbjct: 249 HVSDLANAHYLALQRLREGKESAVYNLGNGK-----------GFSVKEVIDVVRKVTGRP 297 Query: 282 RFIED---RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 +ED RPG S KIK E+ W P+ ++E+ ++ W+L + Sbjct: 298 IKVEDAPRRPGDPAVLVASSEKIKKELNWQPRMADLETIVSTAWKWHLSH 347 >gi|256831047|ref|YP_003159775.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256580223|gb|ACU91359.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 310 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 135/324 (41%), Gaps = 24/324 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ VTG AGFIGS R L V + G K + + L ++ + + Sbjct: 4 RVFVTGAAGFIGSNTVRTLAESGWTVVGI-----GLGGQEEAKHLRELGLHAWFETSVTL 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + PDAI++ A V S+ + N+ T +LE R Sbjct: 59 DALWRVESEAGSPDAIIHCAGSGSVAYSMTQPRQDFLGNVNTTLDILEFVR--------Q 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + S+ VYG + + SED P +P SPY K + L ++ +GIPV + Sbjct: 111 SSGRIAVVVPSSAAVYGVVHQLPISEDAPLHPISPYGTHKIVMEMLCKSYAKQWGIPVCV 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 + YG ++L+ A + G+ F +G G +RDWL+V D R L + Sbjct: 171 VRLFSVYGA-GLRKQLLWDACCKATAGTFSF-FGTGAEIRDWLHVRDAARLLADAINFSS 228 Query: 242 IGERYNIGGNNERKNI-DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 GG+ +I +I+ +G L + + ++S E R G Y D S+ Sbjct: 229 PDCPVLNGGSGRGISIREILTTVGNLWNPKVTPTFSG-------EARSGDPAHYIADVSR 281 Query: 301 IKSEIGWFPQENMESGLNKTVCWY 324 + + G+ P ++ GL + V W+ Sbjct: 282 LNAR-GYVPSVILDQGLAEYVEWF 304 >gi|312137300|ref|YP_004004637.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] gi|311225019|gb|ADP77875.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM 2088] Length = 313 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 140/335 (41%), Gaps = 46/335 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGG GFIG L R L +V+ +D + S+ ++++ D+ Sbjct: 4 FRILVTGGEGFIGKHLVREL-ESRGHEVISLD-------------LMHSDRENYIRADVR 49 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + ++ D + + AAE + TN+IGT L+ Sbjct: 50 NYRQLERVFERWKFDYVYHLAAEYGRWNGEHYYENLWETNVIGTK----------HILNL 99 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG-------- 172 K FR + S+ EVYG D G+ ED+ N +P T +DY + W Sbjct: 100 QVKHGFRLIFFSSAEVYGDYD-GVMHEDVMVN--NPIKDTYQMNDYAISKWAGELMCMNA 156 Query: 173 -HTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 +G ++ N YGP YH IP I + +Y + + D YVED Sbjct: 157 ERMHGSEIVRVRPVNCYGPGEKYHPYRGFIPKFIYHALHNKPYTVYKGHKRIID--YVED 214 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 VR ++ + GE YN+GG E +++I D ++ ++R+ E P Sbjct: 215 SVRTFANIVDNFKPGEVYNVGGRRE-----WLYDIKEYSDMVLEAVGRDDSIVRYKEVEP 269 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R +D SK + ++G P+ + G+ +TV W Sbjct: 270 HTTRVKIVDCSKAERDLGHDPKVPPQEGIKRTVEW 304 >gi|323473395|gb|ADX66463.1| ScnJ [Streptomyces chattanoogensis] Length = 343 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 145/321 (45%), Gaps = 28/321 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQ-SNLFSFLQVDI 59 R ++TG G GS L +L+ QV + + G N K +S+ + SF++ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLEQ-GYQVWGLIR----GQANPRKSRVSRLVSELSFVEGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ + QPD I N A S V S + N +G +LE R+ S L+ Sbjct: 59 MDQSSLCSAVDKVQPDEIYNLGAISFVPMSWQQPELVTEINGMGVLRMLEAIRM-VSGLN 117 Query: 120 QDKKD---QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + D Q RF Q S+ E++G + + E + P SPY K ++ + ++G Sbjct: 118 GSRSDGGRQIRFYQASSSEMFGKVAETPQRETTIFRPRSPYGVAKTYGHFITRNYRESFG 177 Query: 177 IPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRA 232 + + N+ P F + I LA+ R+ G L G+ VRDW + D+VRA Sbjct: 178 MYAVSGMLFNHESPRRGAEFVTRKISLAVARIKLGYQDKLSLGNLDAVRDWGFAGDYVRA 237 Query: 233 LYLVLKKGRIGERYNIGG---NNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRP 288 ++L+L++ G+ Y IG ++ R + I FE +G + + S RP Sbjct: 238 MHLMLQQDEPGD-YVIGTGEMHSVRDAVRIAFEHVGLNWEDYVSIDPSLV--------RP 288 Query: 289 GHDRRYAIDSSKIKSEIGWFP 309 D+ + + +GW P Sbjct: 289 AEVEILCADAERARDRLGWEP 309 >gi|239621051|ref|ZP_04664082.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515973|gb|EEQ55840.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 208 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 71/134 (52%), Gaps = 14/134 (10%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG GFIG+ RY+ N + + V+DKLTY GN ++ + S + + DICD Sbjct: 22 ILVTGGCGFIGANFVRYVARNHPHVHITVLDKLTYGGNPENIAGLPPSQV-DLVVGDICD 80 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAIV+FAAESH D SI + FI TN+ GT LLE R Sbjct: 81 VALLERIVPGH--DAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAAR--------- 129 Query: 122 KKDQFRFLQISTDE 135 K RF IST E Sbjct: 130 -KHDVRFHHISTGE 142 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRP 333 + H + DRPGHDRRYAID+SK+++E+GW P + GL + WY ++ WW P Sbjct: 135 FHHISTGENVRDRPGHDRRYAIDASKLRAELGWSPMHTDFADGLRNVIDWYTEHRGWWAP 194 >gi|254458296|ref|ZP_05071722.1| polysaccharide biosynthesis protein [Campylobacterales bacterium GD 1] gi|207085132|gb|EDZ62418.1| polysaccharide biosynthesis protein [Campylobacterales bacterium GD 1] Length = 345 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 38/342 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL---FSFLQVD 58 +VTG AGFIGS L L+ L +V+ +D + Y N+ +K S FSF + D Sbjct: 18 LVTGVAGFIGSNLAEALL-KLNQKVIGLDNFSTGYQHNIEDIKNNVTSQQWRSFSFTEGD 76 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D E K D I++ AA V RSI ++ IT+N L + + L Sbjct: 77 IKDYETCYEITKGV--DIILHQAALGSVPRSI---NDPITSN-------LSNVTGFLNML 124 Query: 119 SQDKKDQF-RFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K + RF+ S+ VYG + E+ N SPY+ TK +++ + TYG+ Sbjct: 125 TAAKNNGVKRFVYASSSSVYGDSMELPKVEERTGNLLSPYAVTKMTNELYGGVFYKTYGL 184 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +G P +IP ++ +I VF+ GDG+ RD+ Y+E+ +++ Sbjct: 185 ETIGIRYFNVFGKRQNPNGAYAAVIPKWLSSLINNEDVFINGDGETSRDFTYIENVIQSN 244 Query: 234 YL---VLKKGRIGERYNIGGNNERKNIDIVF-----EIGFLLDALIPKSYSHTELIRFIE 285 L K GE +N GG R ++ ++ E+ L+ + K + E Sbjct: 245 ILCGTTTTKEAYGEVFN-GGIGGRLTLNKLYSSISRELKENLENFVTKEPVYREF----- 298 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R G R + K+K + P +++ GL++++ WY++N Sbjct: 299 -RAGDIRHSNANIDKLKKATQYEPTHDIDMGLHESIKWYIEN 339 >gi|126462927|ref|YP_001044041.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|126104591|gb|ABN77269.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] Length = 337 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +VL +D G++ +L+ + F ++ D+ Sbjct: 10 ILVAGGAGFVGSHLCEALLRQGH-RVLCLDSF-LTGSMENLQALCTFREFRLIRQDVV-- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E IR L E + + N A+ + + + TN++GT L L+ + Sbjct: 66 EPIR--LSETV-ERVYNLASPASPPQYQADPVHTMMTNVVGTGNL----------LALAE 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYGI 177 RFLQ ST EVYG + ED N S + Y K +++ L + Sbjct: 113 AHGARFLQASTSEVYGDPEIHPQPEDYRGNVSCTGSRACYDEGKRAAETLCFDYSRRARA 172 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP+ P+ +++ + + + G + +YG G+ R + +V D V L Sbjct: 173 DVRVARIFNTYGPHMRPDDGRIVSNLLVQALRGEPLTVYGTGEQTRSFCFVSDLVAGLMA 232 Query: 236 VLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDR 292 +++ + N+G E + E+ L+ +++P + H L ED P R Sbjct: 233 LMEAEETPDGAVNLGNPGE----FTIAELAALVQSVVPTAAGVVHRPL---PEDDP---R 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + K +GW P + GL +T W+ Sbjct: 283 RRRPDIGRAKRLLGWEPLVPLSEGLPETAAWF 314 >gi|333030960|ref|ZP_08459021.1| GDP-mannose 4,6-dehydratase [Bacteroides coprosuis DSM 18011] gi|332741557|gb|EGJ72039.1| GDP-mannose 4,6-dehydratase [Bacteroides coprosuis DSM 18011] Length = 377 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 22/251 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL---------KEISQSNLF 52 + ++TG G GS L +L+ +V I + + + N N + +++ Q L Sbjct: 20 KALITGITGQDGSFLAEFLIEK-GYEVHGILRRSSSFNTNRIEHLYLDEWVRDMKQERLV 78 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + D+ D + +++ QPD I N AA+SHV S + T+ +GT LLE R Sbjct: 79 NLHYGDMTDSSSLVRIIQQIQPDEIYNLAAQSHVKVSFDVPEYTADTDALGTLRLLEAVR 138 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + L +KK R Q ST E++G + + +E P+ P SPY K ++ + Sbjct: 139 I----LGLEKKT--RIYQASTSELFGKVQEIPQTETTPFYPRSPYGVAKQYGYWITKNYR 192 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVE 227 +Y + +L ++ S G F + I LA R+ +G LY G+ +RDW Y Sbjct: 193 ESYEMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGHQEKLYLGNLSALRDWGYAR 251 Query: 228 DHVRALYLVLK 238 D+V ++L+L+ Sbjct: 252 DYVECMWLMLQ 262 >gi|301755420|ref|XP_002913550.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Ailuropoda melanoleuca] Length = 420 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 147 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 148 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 190 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 250 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 251 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 309 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 310 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 361 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K + W P +E GLNK + ++ Sbjct: 362 KPDIRKAKMMLAWEPVVPLEEGLNKAIHYF 391 >gi|124024227|ref|YP_001018534.1| nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9303] gi|123964513|gb|ABM79269.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9303] Length = 340 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/343 (25%), Positives = 147/343 (42%), Gaps = 34/343 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNL---FSFL 55 ++V+G AGFIG+AL + L+ +V+ ID L Y +L L +I ++L ++F Sbjct: 5 VVVSGAAGFIGAALVQRLLAQGD-RVIGIDNLNDYYDPSLKRARLAQIEAASLKASWTFY 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + D I K +P +VN AA++ V S+ +I N++G +LE R Sbjct: 64 PIALEDGAGIEELFKAEKPQVVVNLAAQAGVRYSLENPAAYIQANLVGFGHILEGCR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG F E P N P S Y+ATK +++ + + H Sbjct: 121 ------HHGVQHLVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAATKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG+P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V L Sbjct: 175 YGLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGEPIKVFNYGKMQRDFTYIDDIVEGLL 234 Query: 235 LVLKKGRIGERYNIGG---NNERKNIDI---VFEIG-------FLLDALIPKSYSHTELI 281 K N+G N + + +F IG L+ KS + Sbjct: 235 RCCDKPATA---NLGFDPLNPDPATAAVPHRLFNIGNSQPIELMHFIELLEKSLGREAVK 291 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F +PG A D+S +++ + + P + G+ WY Sbjct: 292 DFQPMQPGDVMATAADTSALEAWVNFRPSTPIAEGVECFSQWY 334 >gi|53803405|ref|YP_114863.1| capsular polysaccharide biosynthesis protein I [Methylococcus capsulatus str. Bath] gi|53757166|gb|AAU91457.1| capsular polysaccharide biosynthesis protein I [Methylococcus capsulatus str. Bath] Length = 336 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 43/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 MR+++TG AGFIGS L L+ D +++ ID + ++ SLKE + L FS Sbjct: 1 MRILITGTAGFIGSHLAHKLL-DRGDEIIGIDNVNDYYDV-SLKEARLARLHARPGFSEA 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ + +R+ + + +P+ +VN AA++ V S+ ++ N++G +LE R + Sbjct: 59 RIALEERDKLFATFARHRPERVVNLAAQAGVRYSLENPHAYVDANLVGFCNILEACRHY- 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + + S+ VYG+ FS + P S Y+ATK +++ + + H Sbjct: 118 --------EVEHLVYASSSSVYGANTAMPFSVHHNLDHPVSLYAATKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+P YGP+ P+ + ++ G + +Y G + RD+ Y++D V + Sbjct: 170 FGLPTTGLRFFTVYGPWGRPDMALFKFTRNILAGQPIDVYNYGHHRRDFTYIDDIVEGVV 229 Query: 235 LVLKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 L K G+R YNIG N + ++++ I L L K+ Sbjct: 230 QTLDKVAAPDPAWRGDRPDPGTSRAPYRLYNIGNN---EPVELLRFIEVLEHCLGCKAE- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + G D + + G+ P +E+G+ + V WY D Sbjct: 286 ----MNLLPMQDGDVPDTYADVDDLMRDTGYRPATPIETGIARFVEWYRD 331 >gi|225180903|ref|ZP_03734351.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] gi|225168384|gb|EEG77187.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] Length = 325 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 158/344 (45%), Gaps = 39/344 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTG AGF+GS LC L+++ +V ID L+ +G +++ + + F+F++ I Sbjct: 1 MKYLVTGAAGFVGSHLCTSLLSEGN-EVWGIDDLS-SGKEENIEHLKGNPRFNFIEGCIS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ D I + AA V + I N+ T LLE W Sbjct: 59 DESQLIKLI--YKVDIIYHLAAVVGVKHYVEDPTRVIDVNVCYTSSLLENA---WKL--- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHT 174 KK F ST EVYG + F+E D Y P+S Y+ +K++ +YL L + Sbjct: 111 GKKVVF----TSTSEVYGKSESIPFAEEDDRVYGPASTNRWCYAISKSAGEYLCLGYAKQ 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLA---ITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+PV++ N YGP +A I + + + + ++GDG R + Y++D V+ Sbjct: 167 -GLPVVILRYFNVYGPRADDSAYGGVATRFINQALARTPLTVHGDGAQTRCFTYIDDIVK 225 Query: 232 ALYLVLKK----GRIGERYNIGGNNERKNIDI---VFEIGFLLDALIPKSYSHTELIRFI 284 A K+ GRI +N+G E +++ V ++ ++ + Y F Sbjct: 226 ATMEAGKRPEAEGRI---FNLGRERETPILELAKMVLKVSGTEGEIVFQPYKE-----FY 277 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 RR D S + +G+ P +E G+ +T+ WY + N Sbjct: 278 GSSYEDIRRRIPDLSAARQILGYNPSVTLEEGIRETLNWYRNRN 321 >gi|150008813|ref|YP_001303556.1| GDP-mannose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] gi|149937237|gb|ABR43934.1| GDP-mannose 4,6-dehydratase [Parabacteroides distasonis ATCC 8503] Length = 362 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 50/291 (17%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F D+ D I +K+ +P+ I N AA+SHV S + + G +LE Sbjct: 52 FHLHYADLGDSMSILQVVKKVKPNEIYNLAAQSHVQVSFDSPEFTADVDATGVLRILEAV 111 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R C D + R Q ST E+YG +++ +E+ P++P SPY+ K ++ + Sbjct: 112 R---QC---DLTETCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWITKEY 165 Query: 172 GHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYV 226 Y + +L ++ S G F + I LA R+ +G LY G+ ++RDW Y Sbjct: 166 REAYNMFCCSGILFNHESERRGET-FVTRKITLAAARIAQGKQDKLYLGNLSSLRDWGYA 224 Query: 227 EDHVRALYLVLKKGR-------IGERYNI------------------GGNNERKNIDIVF 261 +D+V ++L+L+ + GE++++ G K ID Sbjct: 225 KDYVECMWLILQNDKPEDFVIATGEQHSVREFCQLAFRYAGIELCFEGEGENEKGIDC-- 282 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + G +L + P Y T+++ + D SK K E+GW PQ+ Sbjct: 283 KSGKVLVEVSPDFYRPTDVVNLLG-----------DPSKAKRELGWNPQKT 322 >gi|148657967|ref|YP_001278172.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148570077|gb|ABQ92222.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 335 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 34/342 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGG GFIGS L LV +L QV ++D L Y GN ++ I ++V+I Sbjct: 15 RVLITGGMGFIGSNLAHRLV-ELDAQVTLVDSLIPIYGGNQRNIAGIEHR-----VRVNI 68 Query: 60 CD--RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D E + L + Q D + N A + SH+D S+ + N +LE R Sbjct: 69 ADVRDEYSMNYLVQGQ-DYLFNLAGQTSHLD-SMTDPYTDLEINCRAQLSILEACR---- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + ST ++YG D E +P K + ++ + + + YG Sbjct: 123 ----KHNPNLKLVYASTRQIYGKPDYLPVDERHLLHPVDVNGVNKMAGEWYHILYNNVYG 178 Query: 177 IPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I +N YGP + + + I R+I+ + ++GDG +RD+ YV+D V A Sbjct: 179 IRACALRLTNTYGPRMRVKDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEA 238 Query: 233 LYLV-LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L G +N+G + + I++ L+D S+ E++ F DR D Sbjct: 239 LLLAGASSAADGGIFNLGSD---ETINLRDLAALLIDINGGGSF---EIVPFPPDRKAID 292 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY-LDNNWWW 331 Y D I+ +GW P+ + GL +T+ +Y + ++W Sbjct: 293 IGDYYADYRLIQGRLGWRPKVPLREGLRRTLEFYRREREYYW 334 >gi|163846791|ref|YP_001634835.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222524609|ref|YP_002569080.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668080|gb|ABY34446.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222448488|gb|ACM52754.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 316 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 34/332 (10%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGF+GS LC R+L V+ +D L G+ +++ ++ F F+ D+ Sbjct: 1 MRVLITGGAGFLGSHLCDRFLAEGHT--VIAMDNLI-TGSTDNIAHLAGHPRFLFIHHDV 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + I + DA+++FA+ + + + + +GT L Sbjct: 58 TNYIYIEGPI-----DAVLHFASPASPIDYLELPIQTLKVGALGT----------HKALG 102 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RFL ST EVYG + + P P Y K ++ + +A+ Sbjct: 103 LARAKGARFLLASTSEVYGDPQVHPQPESYYGHVNPVGPRGVYDEAKRFAEAMTMAYHTY 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP +++P I++ + G + +YGDG R + YV D V Sbjct: 163 HGVETRIVRIFNTYGPRMRLRDGRVVPNFISQALRGEPLTIYGDGSQTRSFQYVSDLVEG 222 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +Y +L + E NIG E + E +++ + +D P + Sbjct: 223 VYRLLFSDEV-EPVNIGNPGEFT----IAEFAQIVNEITGNKAGVVYRDLRTKDDP---Q 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K + + W P+ + GL +T+ W+ Sbjct: 275 VRQPDITKARRILNWEPKVTLREGLEQTIPWF 306 >gi|255014245|ref|ZP_05286371.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_7] Length = 361 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 86/351 (24%), Positives = 148/351 (42%), Gaps = 51/351 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TG G GS L +L+ V + + + + F D+ Sbjct: 1 MKALITGITGQDGSFLAEFLLAK-GYDVHGTIRRSSVDFRERIAHLEGHPNFHLHYADLG 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I +K+ +P+ I N AA+SHV S + + G +LE R C Sbjct: 60 DSMSILQVVKKVRPNEIYNLAAQSHVQVSFDSPEFTADVDATGVLRILEAVR---QC--- 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 D D R Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + Sbjct: 114 DLTDTCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKLYGYWIVKEYREAYNMFCC 173 Query: 178 -PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYL 235 +L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V ++L Sbjct: 174 SGILFNHESERRGET-FVTRKITLAAARIAQGKQEKLYLGNLSSLRDWGYAKDYVECMWL 232 Query: 236 VLKKGR-------IGERYNI------------------GGNNERKNIDIVFEIGFLLDAL 270 +L+ + GE++++ G K ID + G +L + Sbjct: 233 ILQNEKPEDFVIATGEQHSVREFCQLAFRHAGIELRFEGEGENEKGIDT--KTGKVLVEV 290 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 P Y T+++ + +K K E+GW PQ+ L K + Sbjct: 291 SPDFYRPTDVVNLWG-----------NPAKAKRELGWNPQKTTFEQLVKIM 330 >gi|327268056|ref|XP_003218814.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Anolis carolinensis] Length = 384 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 54 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 111 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I D I + A+ + + + + TN IGT + L Sbjct: 112 PLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 154 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 155 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 214 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 215 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGL- 273 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 274 VALMNSNVSSPVNLGNPEEHS----ILEFAQLIKKLV-GSGSEIQFLSEAQDDP---QKR 325 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 326 KPDIKKAKLLLGWEPVVPLEEGLNKAIHYF 355 >gi|332521131|ref|ZP_08397589.1| NAD-dependent epimerase/dehydratase [Lacinutrix algicola 5H-3-7-4] gi|332043224|gb|EGI79421.1| NAD-dependent epimerase/dehydratase [Lacinutrix algicola 5H-3-7-4] Length = 327 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 25/326 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ +VTGGAGFIGS + YL+ +V V+D L N +Q+N F F++ DI Sbjct: 13 LQFLVTGGAGFIGSHIVSYLLAHQAKKVRVLDNLATGFKTNLEPFFNQAN-FEFIEGDIR 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + ++A+++ D + + AA V RSI D+ +T+N + L + Sbjct: 72 DLDTCKAAMQDM--DYVSHQAALGSVPRSI---DDPVTSNAVNVSGFLN-----MLIALK 121 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D R + ++ YG E +P SPY+ TK ++ +G TY + Sbjct: 122 DNTTVKRMVYAASSSTYGDSTILPKVESSIGSPLSPYAVTKYVNELYADVFGKTYNTDTI 181 Query: 181 LSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYL 235 N +GP P ++PL + +++ + GDG RD+ YV + V+ + Sbjct: 182 GLRYFNVFGPKQNPNGAYAAVVPLFMKALVDNVPATINGDGSQTRDFTYVSNAVQGNIKS 241 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G E +NI N+ I + +G L + + ++F R G + Sbjct: 242 FFASGEAKNEVFNIACNDRISIIKLWETLGVLAN--------KSTKVKFGPKRLGDVKDS 293 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKT 320 D SK + IG+ P+ + GL T Sbjct: 294 LADISKAERLIGYKPKYSTVEGLKAT 319 >gi|325067624|ref|ZP_08126297.1| NAD-dependent epimerase/dehydratase [Actinomyces oris K20] Length = 364 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 52/356 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG A+ R L + +V+ +D + + + + ++D+ E Sbjct: 6 LVTGGAGFIGCAISRDLADAFD-RVVALDNMHPQIHPSQARPAELDERVELRRLDVSLAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + L E PD IV+ AAE+ +S+ A N++GT +L+ L + + Sbjct: 65 DWDALLAEVAPDVIVHLAAETGTGQSLTEASRHANVNVVGTTQMLD-------ALVRHES 117 Query: 124 DQFRFLQISTDEVYGS--------------------LDKGLF-----------SEDMPYN 152 + + S+ VYG L+ G + S ++ + Sbjct: 118 RPNKIVLASSRAVYGEGKWIDAEGRPSYPGQRTHAMLEAGQWDFAGLTPSVQSSTEVKAS 177 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMI-EG 208 P++ Y+ATK + LV +W ++G+ +L N YGP P I R+ +G Sbjct: 178 PANVYAATKFCQENLVTSWCGSFGVTPVLYRLQNVYGPGQSLINPYTGIVSLFARLAKQG 237 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYL-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 + +Y DGQ VRD+++++D A+ VL Y+IG + + I Sbjct: 238 KSIPVYEDGQIVRDFVFIDDVASAIVAGVLHSPAAALPYDIGLGERTTIMQVAQAIAEHY 297 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A P + R G R D+++ + + W P+ + G+N+ W Sbjct: 298 GAPAPHVTG--------QFRDGDVRAAWADTARARQALDWEPRVGVTEGINRLCDW 345 >gi|224042906|ref|XP_002193968.1| PREDICTED: similar to UDP-glucuronate decarboxylase 1 [Taeniopygia guttata] Length = 421 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 148 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 149 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 191 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 192 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 251 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 252 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGL- 310 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 311 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKKLV-GSGSEIQFLSEAQDDP---QKR 362 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 363 KPDIRKAKLLLGWEPVVPLEEGLNKAIHYF 392 >gi|206974248|ref|ZP_03235165.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus H3081.97] gi|217958044|ref|YP_002336588.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH187] gi|222094242|ref|YP_002528299.1| udp-glucose 4-epimerase (nad-dependent epimerase) [Bacillus cereus Q1] gi|206747488|gb|EDZ58878.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus H3081.97] gi|217065621|gb|ACJ79871.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus AH187] gi|221238297|gb|ACM11007.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus cereus Q1] Length = 321 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVKR-GYDVTIVDNF-YKGKNKYHNELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEKS----IKEVAAVIKKLT-NSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLRELVQFQAKVTWEQGLKETIKWFREEN 319 >gi|12055074|emb|CAC20923.1| PimJ protein [Streptomyces natalensis] Length = 343 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 28/321 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQ-SNLFSFLQVDI 59 R ++TG G GS L +L+ QV + + G N K +S+ + SF+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLAQ-GYQVWGLIR----GQANPRKSRVSRLVSELSFVDGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ + QPD I N A S V S + N +G +LE R+ S L+ Sbjct: 59 MDQSSLCSAVDKVQPDEIYNLGAISFVPMSWQQPELVTEINGMGVLRMLEAIRMV-SGLN 117 Query: 120 QDKKD---QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + D Q RF Q S+ E++G + + E + P SPY K ++ + ++G Sbjct: 118 GSRSDGGGQIRFYQASSSEMFGKVAETPQRETTIFRPRSPYGVAKTYGHFITRNYRESFG 177 Query: 177 IPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRA 232 + + N+ P F + I LA+ R+ G L G+ VRDW + D+VRA Sbjct: 178 MYAVSGMLFNHESPRRGAEFVTRKISLAVARIKLGYQDKLSLGNLDAVRDWGFAGDYVRA 237 Query: 233 LYLVLKKGRIGERYNIGG---NNERKNIDIVFE-IGFLLDALIPKSYSHTELIRFIEDRP 288 ++L+L++ G+ Y IG ++ R + I FE +G + + S RP Sbjct: 238 MHLMLQQDEPGD-YVIGTGEMHSVRDAVRIAFEHVGLNWEDYVSIDPSLV--------RP 288 Query: 289 GHDRRYAIDSSKIKSEIGWFP 309 D+ + ++++GW P Sbjct: 289 AEVEILCADAERARTQLGWEP 309 >gi|326913813|ref|XP_003203228.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Meleagris gallopavo] Length = 426 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 96 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 153 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 154 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 196 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 197 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 256 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 257 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGL- 315 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 316 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKKLV-GSGSEIQFLSEAQDDP---QKR 367 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 368 KPDIRKAKLLLGWEPVVPLEEGLNKAIHYF 397 >gi|149199221|ref|ZP_01876259.1| GDP-D-mannose dehydratase in colanic acid gene cluster [Lentisphaera araneosa HTCC2155] gi|149137646|gb|EDM26061.1| GDP-D-mannose dehydratase in colanic acid gene cluster [Lentisphaera araneosa HTCC2155] Length = 372 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/362 (24%), Positives = 154/362 (42%), Gaps = 60/362 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L +L+ + +V I + N + + I Q F Sbjct: 4 KALITGVTGQDGSYLAEFLL-EKGYEVHGIKRRASLFNTSRVDHIYQDPHADDRNFILHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +K+ QPD I N A+SHV S + + +GT LLE RL Sbjct: 63 GDLTDSSNLIRIIKDIQPDEIYNLGAQSHVAVSFDSPEYTADVDAMGTIRLLEAIRL--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK +F Q ST E+YG + + +E P+ P SPY+ K + ++ + + YG Sbjct: 120 -LGLEKKT--KFYQASTSELYGEVRETPQTETTPFYPRSPYAVAKMYAYWICVNYREAYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I AI + G LY G+ +RDW + +D+V+ Sbjct: 177 IYACNGILFNHESPRRGETFVTRKITRAIANIALGLEDCLYLGNMNALRDWGHAKDYVKM 236 Query: 233 LYLVLKKGR-------IGERYNIG----------------GNNERKNIDIV--------- 260 +L+L++ + G +Y++ +E + + IV Sbjct: 237 QWLMLQQDQPDDFVIATGVQYSVRQFVEFAANELGIEIDWQGSEEEEVGIVKAVNSDQAP 296 Query: 261 -FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 E+G + A+ PK Y TE+ + D +K K ++GW P+ ++ + + Sbjct: 297 GIEVGQKIVAVDPKYYRPTEVETLLG-----------DPAKAKEKLGWVPETTLQEMVEE 345 Query: 320 TV 321 V Sbjct: 346 MV 347 >gi|50730484|ref|XP_416926.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 421 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 148 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 149 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 191 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + +ED P P + Y K ++ + A+ G Sbjct: 192 KRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 251 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 252 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGL- 310 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 311 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKKLV-GSGSEIQFLSEAQDDP---QKR 362 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 363 KPDIRKAKLLLGWEPVVPLEEGLNKAIHYF 392 >gi|298247134|ref|ZP_06970939.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297549793|gb|EFH83659.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 327 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 152/349 (43%), Gaps = 56/349 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG G+IGS R L V+VID L +S + I F Q I Sbjct: 1 MKVLVTGGTGYIGSHTVRELTAR-GYDVVVIDTL----ERSSRQTIGS---LPFYQGSIT 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +P A+++FAA S+L +++ TN+ G+ LLE Sbjct: 53 DDAFLERVFAQEKPGAVIHFAAYKAPGESMLEPEKYFRTNVGGSISLLETM--------- 103 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + Q RF+ S+ V+G+ + +E+ P++P S Y TK + L+ + T GI Sbjct: 104 -ARHQVRFIVFSSSCSVFGTPTQLPVTENAPFSPESVYGETKLMGETLLRWFEKTRGIRY 162 Query: 180 LLSNCSNNYGP---------YHFPEKLIPLAITRMIEGS-HVFLYG------DGQNVRDW 223 N G + + LIPL + + + + ++G DG VRD+ Sbjct: 163 AALRYFNASGASLDNVIGEDWDRTQNLIPLVMKAALGVTPSIKVFGTDYPTADGTAVRDY 222 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 ++V D HV+AL + ++ E YN+G GN+ ++ I+ K S Sbjct: 223 IHVVDLAIAHVKALEYI-QRTNTSEAYNLGTGVGNSVQEVINAA------------KRIS 269 Query: 277 HTEL-IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + ++ RPG D K +SE+ W Q ++E L W+ Sbjct: 270 GVDFKVEYVPRRPGDPAAVWADCHKAESELDWKTQYDLEVILQTAWRWH 318 >gi|157952467|ref|YP_001497359.1| hypothetical protein NY2A_B163R [Paramecium bursaria Chlorella virus NY2A] gi|155122694|gb|ABT14562.1| hypothetical protein NY2A_B163R [Paramecium bursaria Chlorella virus NY2A] Length = 343 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 80/339 (23%), Positives = 141/339 (41%), Gaps = 41/339 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG G GS LC +LVN V + + + N E + + + D+ D Sbjct: 6 VLVTGATGQDGSYLCPFLVNK---GYTVYGLVRHTSSENPRVEELKKQGINIVHGDLTDS 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + +PD I N AA+S V S A+ + +G LL+ R+ Sbjct: 63 SSLIHIITKIRPDEIYNLAAQSFVHDSFNQAEVTANVDALGVLRLLDAVRI--------S 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R Q S+ E+YG + + +E+ P+ P SPY K + ++ + +Y + V S Sbjct: 115 GVNSRICQASSSELYGKVQEIPQTENTPFYPRSPYGVAKLYAYWICKNYRESYNMYVCNS 174 Query: 183 NCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 C N+ P + F + I + + G +Y G+ RDW Y +D+V A++L+L+ Sbjct: 175 ICFNHESPNRGHQFVTRKITKVVANIFNGVEKCMYLGNIDAKRDWGYAKDYVEAMWLMLQ 234 Query: 239 KGRIGERYNIGGNNE--RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + + G R+ + + F + LD ++ S H + + P + R Sbjct: 235 QDTPDDYVIATGKTTSVREFVKMAFGV---LDIVVEFSGEHENEVATVVSAPENSRVKVG 291 Query: 297 DS---------------------SKIKSEIGWFPQENME 314 D +K K +GW P+ N+E Sbjct: 292 DVVMRINKDFYRPAEVDLLVGNYTKAKEVLGWEPKTNLE 330 >gi|332711566|ref|ZP_08431497.1| GDP-mannose 4,6-dehydratase [Lyngbya majuscula 3L] gi|332349544|gb|EGJ29153.1| GDP-mannose 4,6-dehydratase [Lyngbya majuscula 3L] Length = 383 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 19/351 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ +V I + T N + + I N FL Sbjct: 30 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHIYVDPHNENARFFLHY 88 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+ QP I N A+SHV S + + + +GT LLE R + Sbjct: 89 GDLTDGVTLRRILEAVQPLEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDYRQ 148 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D RF Q + E++G + + E P+ P SPY+ K + + + + +YG Sbjct: 149 RTGID----VRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYAHWQTINYRESYG 204 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R++ G LY G+ + RDW Y +D+V+A Sbjct: 205 MFACNGILFNHESPRRGETFVTRKITRAIARIVGGQQKKLYLGNLDSKRDWGYAKDYVKA 264 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++++L++ + + + E ++ +I F L Y + R++ RP Sbjct: 265 MWMMLQQDKPDD--YVVATGETHSVQEFLDIAFKYVNLDWHDYVEFDK-RYL--RPAEVD 319 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 D +K K ++GW P E + V L P K +P ND Sbjct: 320 LLIGDPTKAKKKLGWEPSVTFEQLVALMVEADLQALGLSLPNGKSTQPLND 370 >gi|270158700|ref|ZP_06187357.1| NAD-dependent epimerase/dehydratase family protein [Legionella longbeachae D-4968] gi|289166492|ref|YP_003456630.1| Protein capI [Legionella longbeachae NSW150] gi|269990725|gb|EEZ96979.1| NAD-dependent epimerase/dehydratase family protein [Legionella longbeachae D-4968] gi|288859665|emb|CBJ13635.1| Protein capI [Legionella longbeachae NSW150] Length = 338 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 47/350 (13%) Query: 1 MRLIVTGGAGFIG-SALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFL 55 MR+++TG AGFIG R+L + K +V+ +D L Y L L +++ S F F Sbjct: 1 MRILITGCAGFIGMHTALRFL--ERKEEVIGVDSLNNYYDVRLKKARLAQLTSSPNFKFY 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI + + + + +P +V+ AA+ V S++ +I +NI G +LE R Sbjct: 59 PFDIGHCQSVHNLFVDEKPSLVVHLAAQVGVRYSLINPQAYIDSNIQGFMNILEACR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN---PSSPYSATKASSDYLVLAWG 172 + S+ VYG + L D Y+ P S Y+ATK S++ + + Sbjct: 116 ------HHSIEHLVYASSSSVYG--NNILIPFDESYDTCHPVSLYAATKKSNELMAHVYS 167 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H Y +P YGP+ P+ M+ G + +Y +G+ +RD+ Y++D V Sbjct: 168 HLYQLPTTGLRFFTVYGPWGRPDMAFFKFTQAMVTGKPIDIYNNGEMIRDFTYIDDIVEG 227 Query: 233 LYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 + ++ K +NIG N+ ID++ I + AL K+ Sbjct: 228 IVRIVDKSSATANDDNLTKNSSADADIPYRVFNIGNNHP---IDLITYIQAIEHALGIKA 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 L ++ +PG A + ++ I + P + G+ V WY Sbjct: 285 -----LKNYLPMQPGDVLATAANIEALEEWISFKPSTPISLGVQHFVDWY 329 >gi|251794396|ref|YP_003009127.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247542022|gb|ACS99040.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 348 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQ 56 M ++VTG AGFIG L L+ + K +V+ +D Y L + ++ S F + Sbjct: 1 MTILVTGAAGFIGFHLSARLLKEGK-RVVGLDNFNDYYDVQLKRDRWSQLVASPSFKGAE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D E + + ++E IV+ AA++ V S+ ++ TN+ G +LE +R Sbjct: 60 QDLADYEGLLALIREEGVTTIVHLAAQAGVRYSLTNPFAYLETNLQGFGHVLEASR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ FS D +P S Y+ATK S++ + A+ H Y Sbjct: 116 -----QAGIKHLVYASSSSVYGANVSMPFSVSDNVDHPVSLYAATKKSNELMAHAYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ +++ G + ++ +G+ RD+ Y++D V +Y Sbjct: 171 NLPTTGLRFFTVYGPWGRPDMAYFSFTQKIMAGEPIQVFNEGKMQRDFTYIDDIVEGIYR 230 Query: 236 VLKKG--------RIG----------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L + R+ + YNIG N K ++++ I + D L K+ Sbjct: 231 LLDQAPQPNAEWDRVDPDPGTSYAPYKVYNIGNN---KPVELMAFINTIEDKLGRKA--- 284 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ F +PG D + +++ + P+ +E G+ + WY Sbjct: 285 --VMEFKPMQPGDVTATYADIDGLMADVDFRPETTIEEGIGRFAEWY 329 >gi|253581957|ref|ZP_04859181.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] gi|251836306|gb|EES64843.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] Length = 329 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 50/351 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + R L+ D V+V+D L G+++++ E ++ + D+ Sbjct: 1 MTILVCGGAGYIGSHVTRALI-DSGEDVIVLDNLQ-TGHVDAVHEKAK-----LVLGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + K+ + D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DNEFMEKVFKDNKIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKTMK-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 K + + + ST YG + E+ P++PY +K + + ++ YGI Sbjct: 106 -KYNVHKIVFSSTAATYGEPENIPILENDKTFPTNPYGESKLAVEKMLKWCDKAYGIKYT 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V ++ + G H PE LIP+ + + + H+ +YG DG +RD++ Sbjct: 165 ALRYFNVAGAHPTGEIGEDHSPESHLIPIILQVALGKREHIGIYGDDYPTVDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A L LK+ G E +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHILALKRLNNGEESEIFNL-GNGEGFSVKEVIEVAR-------KVTKHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R G + S K E+ W P+ N T+ +D W W Sbjct: 277 LVSPRRAGDPAKLVASSEKAMKELKWKPKYN-------TLEKIIDTAWTWH 320 >gi|311746773|ref|ZP_07720558.1| NAD-dependent epimerase/dehydratase family protein [Algoriphagus sp. PR1] gi|126578452|gb|EAZ82616.1| NAD-dependent epimerase/dehydratase family protein [Algoriphagus sp. PR1] Length = 310 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 45/336 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V+GG GF+GS LC L+ + +VL +D + GN ++ + + F L+ D+ Sbjct: 3 RVLVSGGGGFLGSHLCDRLLKEGN-EVLCVDNF-FTGNRRNIHHLLDNKNFELLRHDVTH 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++IG + L Sbjct: 61 PLYV-------EVDEIYNLACPASPIHYQFDPVQTTKTSVIGAM----------NMLGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 K+ + + LQ ST E+YG D + + Y P + Y K ++ L + Sbjct: 104 KRLKIKILQASTSEIYG--DPEIHPQPESYRGNVNTLGPRACYDEGKRCAETLFFDYYRQ 161 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + +P+ + N YGP P +++ I + ++ + +YGDG+ R + YV+D++ Sbjct: 162 HQVPIKVMRIFNTYGPRMHPNDGRVVSNFIVQALKNEDITIYGDGKQTRSFCYVDDNIEG 221 Query: 233 LYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRP 288 +Y ++ + G G NIG E F + L +I + S ++L+ +D P Sbjct: 222 MYRLMNSRDGFTGP-VNIGNPGE-------FTMLELAQLIIELTNSKSKLVFMSLPQDDP 273 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ ID + K E+ W P+ ++ GL KT+ ++ Sbjct: 274 -LQRKPVIDLA--KKELDWEPKIALKDGLTKTIEYF 306 >gi|85704550|ref|ZP_01035652.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius sp. 217] gi|85670958|gb|EAQ25817.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius sp. 217] Length = 290 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 28/271 (10%) Query: 61 DRECIRSALKEFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + L + PD I++ A V S+ E +N+I ++LE R Sbjct: 32 DGGVTEANLSDLMPDCSVIIHCAGSGSVAHSLNAPAEDFQSNVITMQLVLEAAR------ 85 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ + S+ VYG++D D P +P SPY K ++ LV +G + +P Sbjct: 86 ---RQGGVSVVFPSSAGVYGAVDTMPIRVDTPNHPVSPYGVNKLIAELLVQQYGRHFNVP 142 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + + YGP ++L+ A ++ +G +F +G G+ RDW++VED R L+++ Sbjct: 143 ATIVRLFSVYGP-QLRKQLLWDACCKLGKGDALF-FGTGEETRDWVHVEDAAR---LLIR 197 Query: 239 KGRIGERYNI---GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF-IEDRPGHDRRY 294 + + GG I +++ L + E IRF + R G + Y Sbjct: 198 AADVASPDCVIVNGGTGAS------VTIRRMIEGLAERMGIGAE-IRFNQQTRAGDPKHY 250 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 A D S+ + GW PQ+++E GL+ V W+L Sbjct: 251 AADISEALA-TGWTPQKDLEQGLDDYVAWFL 280 >gi|303231127|ref|ZP_07317867.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-049-V-Sch6] gi|302514258|gb|EFL56260.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-049-V-Sch6] Length = 329 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 59/355 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L+ +V+D + G+ +S+ + +++DI Sbjct: 1 MNILVTGGAGYIGSHTVRALIQ-AGFTPIVVDNFS-RGHRSSIPK-----GVKVIELDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +K+ I++FAA S V S++ + N++G++ L+E R Q Sbjct: 54 DSKLV-NVMKDNNIKGIMHFAAHSQVGESMINPSIYYENNVVGSYRLIESAR-------Q 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F F ST VYG + E P++ Y TK + ++ + YG + Sbjct: 106 AGVQHFVFS--STAAVYGEPEVVPIVETAKLQPTNVYGRTKLMIEEMLHDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEG-SHVFLYG------DGQNVRDWL 224 ++ S + G H PE LIPL + ++ H+ ++G DG +RD++ Sbjct: 164 ALRYFNAAGADESGDIGEDHSPETHLIPLVLEAALKKRPHITVFGTDYDTADGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV A+ ++ G +N+G N GF + +I + TE+ Sbjct: 224 HVTDLASAHVLAMNYLINGGE-SRAFNLGSGN-----------GFSVKDIIETAKKVTEI 271 Query: 281 ---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + E R G S IK+ +GW PQ + S + + + W W Sbjct: 272 DIPVEYGERRAGDPSTLIASSDCIKNVLGWNPQHSELSHI-------IGDAWRWH 319 >gi|150006700|ref|YP_001301443.1| nucleoside-diphosphate-sugar epimerase [Parabacteroides distasonis ATCC 8503] gi|298377664|ref|ZP_06987615.1| NAD-dependent epimerase/dehydratase family protein [Bacteroides sp. 3_1_19] gi|149935124|gb|ABR41821.1| nucleoside-diphosphate-sugar epimerase [Parabacteroides distasonis ATCC 8503] gi|298265367|gb|EFI07029.1| NAD-dependent epimerase/dehydratase family protein [Bacteroides sp. 3_1_19] Length = 324 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 32/339 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-SNLFSFLQVDIC 60 +++VTGGAGFIGS LC +L+ +V+ +D N + + S F + DI Sbjct: 3 KILVTGGAGFIGSNLCEHLLAH-NYEVVCLDNFATGKPENVFPLLERYSEKFKLIVGDIR 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 R A++ D +++ AA V RSI TNI G +L R Sbjct: 62 VLADCRKAVEGV--DYVMHEAALGSVPRSIKDPITTNDTNISGFLNMLVTAR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ ++ YG ED+ P SPY+ TK ++ + TYG+ + Sbjct: 112 -DAGVKRFIYAASSSTYGDSKSLPKVEDVIGKPLSPYAITKYVNELYADVFAKTYGMECI 170 Query: 181 LSNCSNNYG----PYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N +G P+ +IPL + +++ + GDG+ RD+ Y+++ V+ L Sbjct: 171 GLRYFNVFGRRQDPFGAYAAVIPLFVKKLMAHESPVINGDGEYSRDFTYIDNVVQMNMLA 230 Query: 237 L---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + K + + YN ER ++ + +G+L + L S +E+I+ +E G +R Sbjct: 231 MTTNNKNAVNQIYNT-AYGERTTLNQL--VGYLKEFL---SEFDSEIIQ-VEVIHGPNRL 283 Query: 294 YAIDSS-----KIKSEIGWFPQENMESGLNKTVCWYLDN 327 I S K KS +G+ PQ +M GL + V WY +N Sbjct: 284 GDIPHSLACIDKAKSLLGYNPQYSMREGLKEAVKWYWNN 322 >gi|153002825|ref|YP_001368506.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] gi|151367443|gb|ABS10443.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] Length = 335 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 154/353 (43%), Gaps = 53/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L L +V+ ID L Y NL L + N F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCL-LGHEVIGIDNLNDYYDVNLKLARLDLLQTLNNFHFIK 59 Query: 57 VDICDRECIRS--ALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+ DRE I + AL FQ +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGIAALFALHAFQ--RVIHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCR-- 115 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGH 173 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Sbjct: 116 -----HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANELMSHTYSH 168 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 Y +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 169 LYQLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGI 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFI--- 284 V K R N D E G + P + S +L+ FI Sbjct: 229 IRVQAK------------PPRPNTDWTVEAGTPATSSAPYRVFNIGNGSPVQLLDFITAL 276 Query: 285 ED-------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ED +PG D++ + +G+ P ++ +G+ + V WY Sbjct: 277 EDALGIKANKNLLPMQPGDVHSTWADTNDLFDAVGYKPLVDINTGVMQFVDWY 329 >gi|119512446|ref|ZP_01631528.1| GDP-mannose 4,6-dehydratase [Nodularia spumigena CCY9414] gi|119462912|gb|EAW43867.1| GDP-mannose 4,6-dehydratase [Nodularia spumigena CCY9414] Length = 358 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 19/317 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L +L+ + QV I + T N + + + + FL Sbjct: 6 RALITGITGQDGSYLSEFLL-EQGYQVHGIIRRTSTFNTDRIDHMYEDPHKEGARLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D IR L++ QP I N A+SHV S + + +GT LLE R + Sbjct: 65 GDLTDGTTIRRILEQVQPTEIYNLGAQSHVRVSFDSPEYTVDAVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + Q RF Q + E++G + SE P+ P SPY+ K + + + + +Y Sbjct: 123 --QKRTGIQVRFYQAGSSEMFGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYN 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ +++ G +Y G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAVAKIVAGKQKKIYMGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + E Y I E ++ E F L + Y + R+I RP Sbjct: 241 MWLMLQQDQ-PEDYVI-ATGETYSVRQFLEKAFGYVNLKWEDYVKFD-DRYI--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFP 309 D +K K ++GW P Sbjct: 296 LLIGDPTKAKQKLGWEP 312 >gi|308276588|gb|ADO26487.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19] Length = 327 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 64/336 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V ++D + GN ++ + + ++ DI Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLLEQGHEVTIVDNFS-TGNKEAVPAGA-----TLMEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ A + DA+++FAA S V S+ E+ N + T LL+ R Sbjct: 54 DKAGEVLASDSY--DAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMR-------A 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F ST YG +ED P P++PY ATK + D+ + ++ YG+ Sbjct: 105 NKVTNLVFS--STAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + + ++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGSIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D A L ++ + G I +F +G + +S ++I+ D Sbjct: 223 RDLADAHVLAMESNKPG-------------IHRIFNLGS------GEGFSVKQVIKACRD 263 Query: 287 RPGH-------DRRYA------IDSSKIKSEIGWFP 309 GH RR S+K +SE+GW P Sbjct: 264 VTGHPIPAEVAPRRAGDPAVLIASSAKAQSELGWNP 299 >gi|168183753|ref|ZP_02618417.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|237795514|ref|YP_002863066.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|182673138|gb|EDT85099.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|229260862|gb|ACQ51895.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 307 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSNVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG + E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPEYLPIDEKHGIRPISYYGLSKYTAEEYIRVFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + + ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SSGG-KERFNIG-------TGVYTSVKELAENMIDIIGLKCN-IEYAPARKGDITNSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLKKTIEYYKNN 304 >gi|149727266|ref|XP_001489364.1| PREDICTED: UDP-glucuronate decarboxylase 1 [Equus caballus] Length = 441 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 111 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 168 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 169 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 211 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SE P P + Y K ++ + A+ G Sbjct: 212 KRVGARLLLASTSEVYGDPEVHPQSESYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEG 271 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 272 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 330 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 331 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKTLV-GSGSEIQFLSEAQDDP---QKR 382 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 383 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 412 >gi|320007268|gb|ADW02118.1| UDP-glucose 4-epimerase [Streptomyces flavogriseus ATCC 33331] Length = 328 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 147/337 (43%), Gaps = 55/337 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++TGGAG+IG+ + + + + +V+V+D +T AG L + + ++ Sbjct: 1 MTWLITGGAGYIGAHVAKAMTGAGE-RVVVLDDMTTGIAGRLPAE--------VTLVRGS 51 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 DR + L E +V+ AA+ V S+ + N+ G +LLE + + Sbjct: 52 ASDRAVLDRVLAEHAVTGVVHLAAKKQVGESVEKPLLYYRENVTGLAVLLE------AVV 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RFL S+ VYG D L +E+ P P +PY TK + ++LV A G +GI Sbjct: 106 AAGVK---RFLFSSSAAVYGVPDVDLITEETPCAPINPYGETKLAGEWLVRAAGRAHGIS 162 Query: 179 VLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLY 225 N G PE ++P+ R+ G ++G DG VRD+++ Sbjct: 163 TACLRYFNVAGAAE-PELADTGVFNVVPMFFDRLTRGEAPRIFGDGYPTPDGTCVRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGE------RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 V D A +L + + G NIG G + R+ ++V E+ L Sbjct: 222 VADLAEA-HLAVARHLDGTPEGGDLTVNIGRGEGVSVRRLAELVGEVTGL---------- 270 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 TE + RPG R + ++ ++GW + +M Sbjct: 271 RTEPV-VDPPRPGDAARAVASADRMAEQLGWTARRDM 306 >gi|171912019|ref|ZP_02927489.1| UDP-glucose 4-epimerase (UDP-galactose-4-epimerase) [Verrucomicrobium spinosum DSM 4136] Length = 338 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 47/337 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 L++TGGAG+IGS ++L+ + +V+V+D + + +E + ++ D+ D Sbjct: 7 LLITGGAGYIGSHTVKHLLKQGE-KVVVVDNMVFG-----HREALDLERVTLVEGDLGDA 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + E QP+A+++FAA + V S+ ++ N+ LLE + K Sbjct: 61 ELMDRVFAEHQPEAVLHFAAYAFVGESVEQPLKYYQNNLTAPLALLEAMK---------K 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 RF+ ST YG+ E+ P P +PY A+K + ++L G +G+ + Sbjct: 112 HGTRRFIFSSTCATYGNPQYMPMDENHPQVPVNPYGASKLMLERVLLDCGVAWGLQSVFL 171 Query: 182 -------SNCSNNYGPYHFPE-KLIP-LAITRMIEGSHVFLYG------DGQNVRDWLYV 226 + G H PE LIP + + E H+ ++G DG +RD+++V Sbjct: 172 RYFNASGGDLEGEIGEDHTPETHLIPRILMAAKGEIEHITVFGTDYATPDGTCIRDYIHV 231 Query: 227 EDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D RA L L R G N+G +I+ + IP SY Sbjct: 232 NDLARAHALALNHLRNGGETTAVNLGTGRGFSVREILATAEAVTGCSIPVSYG------- 284 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWF-----PQENMES 315 R G + +K +GW P++++ES Sbjct: 285 -PRRAGDPPELVANPAKALEVLGWEAEYKDPRQHIES 320 >gi|281338124|gb|EFB13708.1| hypothetical protein PANDA_001364 [Ailuropoda melanoleuca] Length = 425 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 95 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 152 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 153 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 195 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 196 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 255 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 256 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 314 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 315 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 366 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K + W P +E GLNK + ++ Sbjct: 367 KPDIRKAKMMLAWEPVVPLEEGLNKAIHYF 396 >gi|255646194|gb|ACU23582.1| unknown [Glycine max] Length = 342 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 34/324 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 29 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNF-FTGSKDNLKKWIGHPRFELIRHDVT 87 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ I + D I + A + + I TN+IGT + L Sbjct: 88 EQLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG + E P S Y K ++ L+ + + Sbjct: 131 AKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 190 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + ++ N YGP + +++ I + I G + + G R + YV D V L Sbjct: 191 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGL 250 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ G NIG E I++ + L++ + I +E+ P R+ Sbjct: 251 IRLMEGENTGP-INIGNPGEFTMIELAENVKELINPKVE--------INMVENTPDDPRQ 301 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D +K K +GW P+ + GL Sbjct: 302 RKPDITKAKELLGWEPKVKLRDGL 325 >gi|172040572|ref|YP_001800286.1| hypothetical protein cur_0892 [Corynebacterium urealyticum DSM 7109] gi|171851876|emb|CAQ04852.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 357 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 48/327 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG++GS +C ++ + V V+D L+ GN +++ + F++ DI D Sbjct: 32 VLVTGGAGYVGS-VCTAVLIENGFHVTVVDNLS-TGNRSAIHPKAN-----FVEGDIADV 84 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 A +F A+ +FAA S V S+ D + N++ T LL+ R + Sbjct: 85 ASEVLADGDFA--AVFHFAARSLVGESVEQPDAYWHHNVVTTLTLLDAMR---------E 133 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + ST YG ++ +EDMP P++PY A+K + DY++ ++ Y + Sbjct: 134 AGVKNIVFSSTAACYGEPEQVPITEDMPTAPTNPYGASKLTIDYMLTSYAKAYDLAATSL 193 Query: 183 NCSNNYGPY-HFPEK------LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVED 228 N G Y F E LIP+ + + + ++G DG VRD+++++D Sbjct: 194 RYFNVAGAYQQFGENREVETHLIPIVLQVALGHRESISIFGSDWPTKDGTAVRDYIHIKD 253 Query: 229 HVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 A L GE +N+G G + R+ ID E+ A IP E R Sbjct: 254 LADAHVLAATSNVAGEHRIFNLGSGDGFSVREVIDTCREV---TGAEIPA----IEAPR- 305 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S+K +E+GW P+ Sbjct: 306 ---RAGDPAVLIASSAKAIAELGWEPK 329 >gi|258646550|ref|ZP_05734019.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403964|gb|EEW97511.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 324 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 97/350 (27%), Positives = 154/350 (44%), Gaps = 59/350 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAG+IGS RY N+ I +++D L+ G+ S+ F++ Sbjct: 1 MNVLITGGAGYIGSHCNRYF-NEKGIYTVIVDDLS-DGHEESVVA------GKFVKGSFG 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWSC 117 DR + LKE + DA+++FAA + V S+ + N+ LL+ T + + Sbjct: 53 DRALMEKILKEEKIDAVIHFAAFASVPDSVARPSRYYHNNVSNMLNLLDAMVATGVKYIV 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S + VY +D E P P +PY TK + ++L + YGI Sbjct: 113 FSSSA-------ATFGEPVYTPID-----EKHPQKPINPYGMTKLIGEKMLLDYEQAYGI 160 Query: 178 PVL------LSNCSNN--YGPYHFPE-KLIPLAITRMIEGS-HVFLYG------DGQNVR 221 S CS++ G H PE LIPL I I G H+ ++G DG +R Sbjct: 161 HSCAFRYFNASGCSHDSLIGEAHNPECHLIPLVIRAAIHGEPHLKVFGDDYDTRDGSCLR 220 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++VED A YL LK + E++N+G + GF + +I KS+ Sbjct: 221 DYVHVEDLAEAHYLGLKYIMEHNCSEQFNLGS-----------QTGFTVLEII-KSFEKV 268 Query: 279 ELIRF---IEDRPGHDRRYAIDSS-KIKSEIGW-FPQENMESGLNKTVCW 323 ++ I R D + S+ K K +GW Q ++E+ L W Sbjct: 269 SGLKVPYEIAGRRAGDPAVLVASNEKAKKLLGWELKQSSLENILRTAYGW 318 >gi|281356169|ref|ZP_06242662.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC BAA-548] gi|281317538|gb|EFB01559.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC BAA-548] Length = 305 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 143/329 (43%), Gaps = 34/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS + Y ++++L + + NL+ L F++ DI Sbjct: 1 MRVLITGGAGFIGSHIAEYFQGKAEVRILDSLRSGFKKNLDGLD-------VEFIEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A+++ D + + AA V S+ E I N G I+LEE Sbjct: 54 DRITVAKAMEDV--DYVFHLAAMISVPESMTKIIECIDINNTGMLIVLEEA--------- 102 Query: 121 DKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K + L ST +YG E M P SPY+ TK +Y + T + Sbjct: 103 -AKAGVKKLCFSTSAAIYGDNPVVPKVETMFPEPKSPYAITKLDGEYYCKMFNDTGKLKT 161 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N +GP P+ +P+ + + + ++GDG+ RD++YV+D V A Sbjct: 162 ACLRYFNVFGPRQDPKSAYAAAVPIFTAKAVANEPLTIFGDGEQTRDFIYVKDIVAANVF 221 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + G YN+ + D+ EI I + S +E I+++ +R G + Sbjct: 222 MATHDFSG-VYNVAYGGKITINDLAKEI-------IRLTGSKSE-IQYLPERIGDVKHSM 272 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+K+ G+ P + G+ TV ++ Sbjct: 273 AAVDKLKA-TGFKPSCSFAEGMAATVAYF 300 >gi|86742157|ref|YP_482557.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86569019|gb|ABD12828.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 347 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 84/337 (24%), Positives = 145/337 (43%), Gaps = 29/337 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIG+ L R L+ +V+VID L+ G L++L + + + Sbjct: 2 VKVVVTGGAGFIGAHLTRALLA-AGTEVVVIDDLST-GALSNLAGLPAELVVG----SVT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL-----EETRLWW 115 DR + A +IV+ AA V+RS+L N GT +L ET + Sbjct: 56 DRTLVEQACTGAS--SIVHLAARPSVERSLLDPMATHAVNATGTLTVLGVAHRAETHVVV 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S D+ S G L S P P SP++A+K +++ L++ ++ Sbjct: 114 VSSSSVYGDRSAAGDRSAAAGAGPLSP---SAGTPCLPRSPFAASKLAAEGYALSYQASF 170 Query: 176 GIPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+PVL + +GPY H ++P I + G + + GDG+ RD++ VE Sbjct: 171 GLPVLTVRLFDVFGPYQSAGHAYAAVVPTFIEAALAGRPLTVRGDGRQTRDFIPVELVTG 230 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L V ++ +IG + ++ + +L + ++ RPG Sbjct: 231 MLCDAVCRRLTHPHPVDIGSGTRTDLLTLIARLEEILGRRL--------VVEHAAPRPGE 282 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++ ++S ++ + L TV WY D Sbjct: 283 IWDSQADTTTMRSLFPDVTGADLTTALAATVTWYADR 319 >gi|260432001|ref|ZP_05785972.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] gi|260415829|gb|EEX09088.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] Length = 327 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 152/333 (45%), Gaps = 52/333 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + V + +T G +++K F Q D+ DR Sbjct: 4 ILVTGGAGYIGSHACKALAQAGYVPVTYDNLVT--GWQDAVK------FGPFEQGDLLDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++QP A+++FAA S V ++ + N+ G+ L+E + CL Sbjct: 56 ARLDQVFAKYQPAAVMHFAALSQVGEAMSEPGRYWRNNVTGSLNLIEAA-VAAGCLD--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 F+ ST YG D + E+ P +P + Y A+K + + ++ + +G+ Sbjct: 112 -----FVFSSTCATYGDHDNVVLDENTPQHPLNAYGASKRAIEDILRDFEQAHGLNHVIF 166 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 V ++ + G +H PE L+PL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPDGDVGEFHRPETHLVPL-LLDAIDGKRDALTVFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-- 280 V D V A L L+ +G+ +N+G GF + +I +S+S T Sbjct: 226 VCDLVDAHVLGLRWLEQGKGSRVFNLGTGT-----------GFSVKEVIAQSHSVTNREV 274 Query: 281 -IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G + S++ ++E+GW P+ + Sbjct: 275 PFNVGPRRAGDCTKLVSGSTRAEAELGWRPKRS 307 >gi|241202962|ref|YP_002974058.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856852|gb|ACS54519.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 36/267 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L ++ I+ +V D LT GN +S++ F++ D+ D Sbjct: 5 RVLVTGGAGYIGSHTAKLLRSE-GIEPVVYDNLT-TGNRSSVR------WGPFVEGDVLD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 C+ ++++ PDA+++FAA ++V S+ ++ N+ G L++ R Q Sbjct: 57 TSCLIEVIEKYAPDAVIHFAASAYVGESVENPAKYYNNNVCGALSLIDACR-------QT 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 F S+ VYG E +P P +PY TK ++++ + YG+ + Sbjct: 110 GLQNVIFS--SSCAVYGVPSVLPIDETLPKAPINPYGKTKLIFEHMLADYAAAYGLRYVA 167 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 ++ G +H PE LIP A+ H+ ++G DG +RD+++ Sbjct: 168 LRYFNACGADPDGELGEWHVPETHLIPRALLAAAGRIPHLEIFGDDYDTPDGTCIRDYIH 227 Query: 226 VEDHVRA---LYLVLKKGRIGERYNIG 249 V D RA + L KG N+G Sbjct: 228 VADLARAHVQAFTHLAKGGANLAVNLG 254 >gi|228966401|ref|ZP_04127455.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|228793330|gb|EEM40879.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar sotto str. T04001] Length = 300 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 87/313 (27%), Positives = 139/313 (44%), Gaps = 42/313 (13%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N + NL +Q DI D++ + + D + AA Sbjct: 4 KHEVWILDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLVAQLFENNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ CL+ D K F +ST VY DK Sbjct: 64 NVQDSIDDARATFENDTIGTFNLLEQ------CLNYDVKMVF----MSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRI---GERYNIGG 250 + + I ++ + +YGDG+ RD LYVED V A Y G I G R +I Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIINAGTRQDISI 230 Query: 251 NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 N L LI + + + I + ++ + K K+ + W P+ Sbjct: 231 NK--------------LAELISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPK 275 Query: 311 ENMESGLNKTVCW 323 ++E G+ KT W Sbjct: 276 VSLEDGVIKTEEW 288 >gi|116873841|ref|YP_850622.1| UDP-glucose 4-epimerase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742719|emb|CAK21843.1| UDP-glucose 4-epimerase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 327 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 152/333 (45%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+N +V+V+D L G+ S+ + ++ F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDELINR-GYEVVVVDNLK-TGHKESIHKKAR-----FFEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKTFLSSVFEKESVDGVIHFAASSLVGESMEIPLDYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 ---EQFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + ++G DG +R Sbjct: 162 KFVALRYFNVAGAKADGSIGEDHQPESHLVPIILQVALGQREKLSIFGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A +S + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVREMLEA--ARSVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWQP 304 >gi|126462559|ref|YP_001043673.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|126104223|gb|ABN76901.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 41/330 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ + V+ +D L G ++ + F FL+ DI R Sbjct: 26 ILVTGGAGFVGSHLCERLIAEGH-SVVCLDNL-LTGRKENVAGLLGHPQFRFLEQDILSR 83 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L D I N A + + + I TF E L + L+ + Sbjct: 84 IDWQGPL-----DEIYNLACAA--------SPPLYQRDPIHTFRTCTEGVL--NLLALAR 128 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHTY 175 R LQ ST EVYG D + + Y P + Y K +++ L +G Sbjct: 129 ATGARILQASTSEVYG--DPEISPQHEGYRGCVNTVGPRACYDEGKRAAETLFWEFGAHQ 186 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP PE +++ I + + S + LYGDG R + YV+D V L Sbjct: 187 GLEVRIARIFNTYGPRMSPEDGRVVSNFIVQALTRSDITLYGDGMQTRSFCYVDDLVTGL 246 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 + L + E N+G E F + L + ++ ++ S + L+ D P Sbjct: 247 -MALMASEVSEPVNLGNPGE-------FTMRELAEMVLAQTGSSSRLVHRPLPVDDP--- 295 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R+ D ++ +GW P + G+ +T+ Sbjct: 296 RQRRPDIAQAARLLGWAPTVPLAEGIARTI 325 >gi|119358376|ref|YP_913020.1| GDP-mannose 4,6-dehydratase [Chlorobium phaeobacteroides DSM 266] gi|119355725|gb|ABL66596.1| GDP-mannose 4,6-dehydratase [Chlorobium phaeobacteroides DSM 266] Length = 397 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 33/295 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + E QPD + N A+SHV S + + +GT LLE R Sbjct: 89 DLTDSSNLTRIISEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRF---- 144 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 145 LGLEKKT--RFYQASTSELYGLVQEIPQRESTPFYPRSPYAVAKLYAYWITVNYREAYGM 202 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S+ G F + I + + +G LY G+ +RDW + +D+VR Sbjct: 203 YACNGILFNHESSRRGE-TFVTRKITRCLANITQGLEECLYVGNMNALRDWGHAKDYVRM 261 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDI----------VFEIGFLLDALIPKSY 275 +++L++ + G +Y++ E+ + + + E+G + I S Sbjct: 262 QWMMLQQEQPRDYVIATGVQYSVRQFIEKAAVQLGITIRWEGTGINEVGIVDSLSIQHSA 321 Query: 276 SHTELIRFIED----RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T + D RP D +K K+++GW P+ ++ + + V + LD Sbjct: 322 LSTGSVIVRVDPRYFRPAEVETLLGDPAKAKADLGWVPEITLDEMVEEMVAYDLD 376 >gi|319789632|ref|YP_004151265.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] gi|317114134|gb|ADU96624.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] Length = 324 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 152/337 (45%), Gaps = 56/337 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDI 59 MR++VTGGAG+IGS L I VL +D L+ + ++ LF L +VD+ Sbjct: 1 MRILVTGGAGYIGSHTVELLGRKGHI-VLTVDNLS--------RGHREAVLFGELAEVDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++E ++ + F+PDA+++FAA V S+ F N LLE + + Sbjct: 52 SEKEKLKELINSFRPDAVIHFAAFIEVGESVKDPKSFYRNNTCNALNLLE------AVVE 105 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K+ F+ ST VYG+ K E+ P NP +PY A+K + + ++ + YG+ Sbjct: 106 SGVKN---FIFSSTAAVYGNPQKVPIPEEHPKNPINPYGASKLAVERMLQDFHTAYGLNY 162 Query: 180 LL--------SNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 + ++ G H PE LIPL I + +G ++G DG +RD Sbjct: 163 VALRYFNAAGADPKGRIGESHNPETHLIPL-ILKAAKGERDSFKIFGTDYPTPDGTCIRD 221 Query: 223 WLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V E H++AL + + G E ++ + G + ++ + T Sbjct: 222 FIHVCDLAEAHLKALEYLAEGG------------ESCALNCGYGTGHSVKEVVETAKRVT 269 Query: 279 ELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQEN 312 +E+ RPG D+ +I+ ++ W P+ N Sbjct: 270 GREFKVEEAPRRPGDPPILVADTRRIEEKLNWKPKFN 306 >gi|325103570|ref|YP_004273224.1| NAD-dependent epimerase/dehydratase [Pedobacter saltans DSM 12145] gi|324972418|gb|ADY51402.1| NAD-dependent epimerase/dehydratase [Pedobacter saltans DSM 12145] Length = 359 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 42/263 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIG L L+ ND L +L AG + K Sbjct: 1 MKILVTGSAGFIGFHLVNSLLQRGDEVVGIDNLNDYYDVNLKYARLAQAGVYQETITYKK 60 Query: 45 EISQSNLFS---FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 EI +S+LF F+Q+DI D + + + K+ + DA+ N AA++ V S++ +I TNI Sbjct: 61 EI-RSSLFENYIFVQLDITDEKGLSALFKKHKFDAVCNLAAQAGVRYSLINPSTYIDTNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-------PS 154 G +LE +R + + S+ VYG ++ MP+N P Sbjct: 120 KGFLNILECSR---------HTNMKNLVYASSSSVYG------LNKKMPFNVKDNVDHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+A+K S++ + A+ H + I YGP+ P+ L + EG + ++ Sbjct: 165 SLYAASKKSNELMAHAYSHLFNIATTGLRFFTVYGPWGRPDMAGFLFAKAISEGKSIQIF 224 Query: 215 GDGQNVRDWLYVEDHVRALYLVL 237 +G RD+ Y++D + + V+ Sbjct: 225 NNGNMKRDFTYIDDIIAGVITVI 247 >gi|168701377|ref|ZP_02733654.1| NAD-dependent epimerase/dehydratase [Gemmata obscuriglobus UQM 2246] Length = 319 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 143/330 (43%), Gaps = 34/330 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L LV + V V+D + G ++L +S + ++ + D Sbjct: 6 LVTGGAGFIGSHLVEDLVRRGR-PVRVLDDFS-TGLRDNLARLSGVEV---VEGSLTDAA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+K + + A + V RS+ GT LL+ R K Sbjct: 61 AVARAVK--GAGVVYHLGALASVARSVEAPAVTHAACATGTLNLLDAAR---------KN 109 Query: 124 DQFRFLQISTDEVYGSLDK-GLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ++ YG G +ED+P SPY+A K + + + A+ HTYGI + Sbjct: 110 GVRRVVYAASSSAYGGHSAPGGQTEDLPLVAKSPYAAAKLAGELYMQAFAHTYGIETVRL 169 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 N +GP + +I L MI G + GDG RD+ +V + V AL Sbjct: 170 RFFNIFGPRQRADSPYSGVIALFAAAMIAGRAPSIQGDGTQSRDFTFVANAVHALTRAAD 229 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPGHDRRYAI 296 G YN+G +++V + +L L P F R G D +Y++ Sbjct: 230 APDASGNVYNVGTGRSVTLLELVAALNRILGTDLRPT---------FGPSRAG-DVKYSL 279 Query: 297 -DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D + ++++G+ P + E GL +TV +L Sbjct: 280 ADIRRTRADLGYAPAVSFEDGLRRTVESHL 309 >gi|218898597|ref|YP_002447008.1| CDP-abequose synthase [Bacillus cereus G9842] gi|228904001|ref|ZP_04068108.1| CDP-abequose synthase [Bacillus thuringiensis IBL 4222] gi|228966418|ref|ZP_04127472.1| CDP-abequose synthase [Bacillus thuringiensis serovar sotto str. T04001] gi|218540922|gb|ACK93316.1| CDP-abequose synthase [Bacillus cereus G9842] gi|228793347|gb|EEM40896.1| CDP-abequose synthase [Bacillus thuringiensis serovar sotto str. T04001] gi|228855646|gb|EEN00199.1| CDP-abequose synthase [Bacillus thuringiensis IBL 4222] Length = 319 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 26/327 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + N+ ++ ++DI DR Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQARIVLFIRTPSNFWRLKDIIK-NIETY-EIDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TNIIGT +++ +L +C Sbjct: 65 KQVQDAIKKVNPDYIFHLAAYG-VNSAHTDYMHAIETNIIGTCNIIQAAKLV-NCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENSINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I ++++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGESEEPHKIFSYIILQVLQNKDVNLTFCNQ-LRDYCYIENIIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRRYAIDSSK 300 E +NIG ++ + ++ L +++ I R D K Sbjct: 233 QNEIFNIGSGT-------IYPLKHYVELLFKHLKTNSRPNYGAIPSRTNERWVPEADVQK 285 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDN 327 IK+ + W P+ N+E G+ KTV WY +N Sbjct: 286 IKNSLSWEPRINIEEGIIKTVNWYKNN 312 >gi|224133746|ref|XP_002327670.1| gdp-mannose 4,6-dehydratase [Populus trichocarpa] gi|118485706|gb|ABK94703.1| unknown [Populus trichocarpa] gi|222836755|gb|EEE75148.1| gdp-mannose 4,6-dehydratase [Populus trichocarpa] Length = 368 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 28/325 (8%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLK----EISQSNL----FSF 54 +VTG G GS L +L+N ++ L+ + N N+ + I N+ Sbjct: 26 LVTGITGQDGSYLTEFLLNKGYEVHGLI----RRSSNFNTQRINHIYIDPHNVHKARMKL 81 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D +R L PD + N AA+SHV S D GT LLE R Sbjct: 82 HYADLSDASSLRRWLDTIYPDEVYNLAAQSHVAVSFEVPDYTADVVATGTVRLLEAVR-- 139 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 S ++ + ++ Q + E++GS SE P++P SPY+A+K ++ + + + Sbjct: 140 -SHIAATGRSHVKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREA 197 Query: 175 YGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDH 229 YG+ +L ++ S G +F + I A+ R+ G LY G+ Q RDW + D+ Sbjct: 198 YGLFACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQSKLYLGNLQASRDWGFAGDY 256 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A++++L++ + + + E ++ E+ F + K + + F RP Sbjct: 257 VEAMWMMLQQEKPDDY--VVATEESHTVEEFLEVAFGYVGMNWKDHVVIDKKYF---RPA 311 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 DSSK + +GW P+ E Sbjct: 312 EVDNLKGDSSKARKVLGWKPKVGFE 336 >gi|163852444|ref|YP_001640487.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163664049|gb|ABY31416.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 337 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQ 56 M +VTG AGFIG AL R L+ V D L+ Y L + +++QS F ++ Sbjct: 1 MHALVTGSAGFIGHALSRRLLAA-GFGVTGFDGLSPYYDVGLKRARHADLAQSPRFEAVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + +PD + + AA++ V S++ ++ N++G LLE R Sbjct: 60 ARLETPGALLDVMARVKPDLVFHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + K L ST YG F E D +P + Y+A+K +++ + ++ H + Sbjct: 116 --AHPVK---HLLVASTSSAYGGNASVPFRETDRAVSPLTLYAASKLANEAMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L +++ G + ++G+G RD+ +++D + A+ Sbjct: 171 RVPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLIDAIVA 230 Query: 236 VLKK--------GRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G I NIGG + + + IG L AL K+ Sbjct: 231 LSERPPPMPSEGGPISAADTLSTVAPYRLVNIGGG---RPVRLDAMIGALEAALGRKA-- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ + PG R ++ +G P+ +E+G+ V WYLD Sbjct: 286 -ERVLKPLP--PGDVIRTHASPDLLRDLVGRLPETPLETGIPAFVRWYLD 332 >gi|116250330|ref|YP_766168.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115254978|emb|CAK06052.1| putative UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 328 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 36/267 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L ++ I+ +V D LT GN +S++ F++ D+ D Sbjct: 5 RVLVTGGAGYIGSHTAKLLRSE-GIEPVVYDNLT-TGNRSSVR------WGPFVEGDVLD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 C+ ++++ PDA+++FAA ++V S+ ++ N+ G L++ R Q Sbjct: 57 TSCLIEVIEKYAPDAVIHFAASAYVGESVENPAKYYNNNVCGALSLIDACR-------QT 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 F S+ VYG E +P P +PY TK ++++ + YG+ + Sbjct: 110 GLQNVIF--SSSCAVYGVPSVLPIDETLPKAPINPYGKTKLIFEHMLADYAAAYGLRYVA 167 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 ++ G +H PE LIP A+ H+ ++G DG +RD+++ Sbjct: 168 LRYFNACGADPDGELGEWHVPETHLIPRALLAAAGRIPHLEIFGDDYDTPDGTCIRDYIH 227 Query: 226 VEDHVRA---LYLVLKKGRIGERYNIG 249 V D RA + L KG N+G Sbjct: 228 VADLARAHVQAFTHLAKGGANLAVNLG 254 >gi|268316693|ref|YP_003290412.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] gi|262334227|gb|ACY48024.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] Length = 313 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 24/320 (7%) Query: 2 RLIVTGGAGFIGS-ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TGGAGFIG + R L + QV V D LT AG+++ L ++ S+ F + DI Sbjct: 5 RVLITGGAGFIGRWVVARCL--EQGYQVAVYDNLT-AGSVDHL--LAFSDRIDFYEADIL 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +++ + E +P+ + + AA + E + N+ GT+ +L+ + Sbjct: 60 DTATLQAVMDETRPEIVFHLAALHFIPYCNAHPQETLRVNVEGTYNVLD---------AA 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ +Y S++ GL E + P Y +K ++ + + T + + Sbjct: 111 ARGGVRTAVVASSGAIYPSVE-GLIPETLAPAPVDVYGLSKWLTEQVAEQFARTTEMACV 169 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGPY LIP I + +G V L G+ RD++YVED R L + ++ Sbjct: 170 AARLFNTYGPYETNPHLIPHIIASLQQGPAVEL-GNIHTKRDYIYVEDVARLLVALGERV 228 Query: 241 RIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 G E N+G E +I+ + L+ I + RP D++ Sbjct: 229 TKGYEVVNVGTGREYSAQEIIETLSELMGQPIEIRIDPARV------RPVDKLHQRADTT 282 Query: 300 KIKSEIGWFPQENMESGLNK 319 +++ G P+ + GL + Sbjct: 283 RLQQLTGMLPEVTLREGLAR 302 >gi|297563631|ref|YP_003682605.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848079|gb|ADH70099.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 327 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 41/343 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG GF+GS L L+ V+ + S KE+ +++ + Sbjct: 3 RAVVTGGNGFVGSHLVDRLLARGDEVVVFDTRGARPAPAPSWKEVE------YVRGSVSS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + A++ D + + AA VDR + E I N GT +L+ L++ Sbjct: 57 SEQLAKAIRG-GVDVVYHLAAVVGVDRYLESPMEVIDVNFTGTRNVLD--------LAER 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F ST EV+G + ED + ++ + S LA T+G Sbjct: 108 AGAKVVFA--STSEVFGKNPDVPWKEDADRVLGTTSASRWSYSSSKALAEHLTFGYMGRG 165 Query: 182 SNCS-----NNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N S N YGP P L+ ++ R + G +Y +G R + Y++D V A + Sbjct: 166 LNASIVRYFNLYGPRQRPAFLVSRSLHRALRGEPPVVYDEGGQTRSFTYIDDAVEATVQI 225 Query: 237 LKKGRI-GERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + GE +N+G ++E R+ +D++ E+ ++P S DR GH Sbjct: 226 GTRPEADGECFNVGSSDEVTIREAVDLIVEL--TGGKVVPTSID-------TRDRFGHSY 276 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 DRR D+ KI+S +GW ++ G+ +T+ W +N WW Sbjct: 277 QDLDRRIP-DAGKIRSLLGWKSTTSLREGVARTIEWAEENPWW 318 >gi|218442749|ref|YP_002381069.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] gi|218175107|gb|ACK73839.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] Length = 324 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 44/348 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAG +GS + LV + +++++D T G L +L + ++ DI D Sbjct: 5 RILITGGAGLVGSHIADLLVKEGTSEIIILDNFTR-GRLENLAWAKEHGHLVIIEGDIRD 63 Query: 62 RECIRSALKE----FQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 R+ + + F A I A E + +L AD GTF +LE Sbjct: 64 RQLLVEVMNGVDVVFHQAAIRITQCAEEPRLAMEVL-AD--------GTFNVLE------ 108 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHT 174 + K + + S+ +YG + +E PYN + Y A K ++ L+ ++ Sbjct: 109 ---AAVKTGVTKVVAASSASIYGMAEDFPTTESHHPYNNRTLYGAAKTFNEGLLRSFYEM 165 Query: 175 YGIPVLLSNCSNNYGP----YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ + N YGP Y +++ + R+ G ++G+G+ D++++ED Sbjct: 166 YGLDYVALRYFNVYGPRMDIYGVYTEVLIRWMERIASGQPPLIFGNGKQTMDFVFIEDIA 225 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPG 289 RA L K E +NI E ++ F + ++ + LIP+ Y + ++ Sbjct: 226 RANILAAKANVTDEVFNIASGVETSLNELAFCLARVMGSDLIPQ-YGAERKVNPVQ---- 280 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 RR A D+SK K +G+ ++E GL + V W W+ + L KE Sbjct: 281 --RRLA-DTSKAKDLLGFEATVSLEKGLERLVNW-----WYEQKLTKE 320 >gi|265766798|ref|ZP_06094627.1| DNTP-hexose dehydratase-epimerase [Bacteroides sp. 2_1_16] gi|263253175|gb|EEZ24651.1| DNTP-hexose dehydratase-epimerase [Bacteroides sp. 2_1_16] Length = 337 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 43/352 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GFIGS L ++ + ++ V+D L G+ ++L+ + F++ D Sbjct: 1 MKYLITGGCGFIGSNLAAEVLKRGE-ELFVLDNLFRYGSASNLEWLRTKGDFTYYPYDTR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE QPD I + A + + SI TN +GTF LL+ R + S Sbjct: 60 NTNDVETVIKEVQPDYIFHLAGQVAMTTSISNPRLDYETNALGTFNLLDAVRKY----SP 115 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 D L ST++VYG + F E + + SPY +K + Sbjct: 116 DSV----ILYSSTNKVYGDFEYLHFREESTRYVCEEYPNGFPESISLDFHSPYGCSKGCA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIE-GSHVF-----LYG 215 D +L + YG+ ++ S+ YG + + I + +E +H + G Sbjct: 172 DQYLLDFHRIYGLKTIVFRHSSMYGSNQHATYDQGWIGWFCQKALEIKNHTLQDPFTISG 231 Query: 216 DGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 G+ VRD L+ ED V LY K GE +NIGG E + I Sbjct: 232 TGKQVRDVLHGEDVVN-LYFTAKDIDKAYGEVFNIGGGIENSLSLLELFDLLENKLDIEM 290 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 +Y+ + R + + D K +GW P+ + +SG+++ + W + Sbjct: 291 TYTQ------LPWRESDQKVFVADIEKATRILGWEPKISKKSGIDRLLIWLM 336 >gi|306820169|ref|ZP_07453813.1| UDP-glucose 4-epimerase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551770|gb|EFM39717.1| UDP-glucose 4-epimerase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 327 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 147/326 (45%), Gaps = 44/326 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAG++GS L +YL+ + V+V D L+ GN +E ++ F ++I Sbjct: 1 MSILITGGAGYLGSHLVQYLLEKNE-DVIVADNLS-TGN----REFVLTD--KFYNINIK 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + + KE + D +++ AA S V S+ ++ N+ T LLE + + Sbjct: 53 NMDELGNIFKENKIDVVIHLAASSLVGESVANPFKYYDNNLYATACLLE-------TMGK 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D+ F ST VYG +DK +EDM PS+ Y+ TK + ++ + YGI + Sbjct: 106 NNVDKIVFS--STASVYGDVDKVPITEDMATIPSNTYARTKLDIENMMRDFETAYGIKSV 163 Query: 181 LSNCSNNYGP---------YHFPEKLIPLAITRMIEGSH-VFLYG------DGQNVRDWL 224 N G +IP+ + +I+G + + ++G DG +RD++ Sbjct: 164 ALRYFNAAGSDVNGIIGEVREVETHIIPIILRNLIDGKNSIDVFGNDYPTDDGTCIRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YLV L G E YN+G ++++ K I Sbjct: 224 HVVDLAHAHYLVANYLLNGGKSEVYNLGSGKGYSVLEVI--------EATRKVTGRKINI 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGW 307 F++ R G KI E+G+ Sbjct: 276 NFVKRRAGDPPNLVASFQKISKELGF 301 >gi|193213768|ref|YP_001994967.1| UDP-glucose 4-epimerase [Chloroherpeton thalassium ATCC 35110] gi|193087245|gb|ACF12520.1| UDP-glucose 4-epimerase [Chloroherpeton thalassium ATCC 35110] Length = 329 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 44/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +++TGGAG+IGS R L + LV+D L Y + E +++ + D+ Sbjct: 1 MTVLITGGAGYIGSHAVRRL-KQAGYKTLVLDNLVYGHS-----EFVEAD--ELIIGDLE 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + + + A+++FAA ++V S+ ++ N+ T LL+ + L+ Sbjct: 53 NTKLLNQVFSKHKIQAVMHFAAYAYVGESVQNPAKYYRNNVASTLNLLD------AMLAY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ ST YG D+ +E P P +PY +K + ++ + H Y + + Sbjct: 107 KVK---KFIFSSTCATYGEPDEIPITETHPQRPINPYGQSKLMVEKILDDYDHAYDLRSV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIE-GSHVFLYG------DGQNVRDWL 224 ++ G H PE LIPL + +E +H+ ++G DG VRD++ Sbjct: 164 RLRYFNAAGADPDGGIGEDHDPETHLIPLVLDAALERRAHISMFGTDYDTPDGTCVRDYI 223 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A L LK G + +N+G N +++ + IP Sbjct: 224 HVTDLAEAHVLGLKYLENGGKTDFFNLGNGNGFSVKEVIETARKITGKEIPA-------- 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + RPG S KIKS +GW PQ Sbjct: 276 KIAPRRPGDPASLVGSSEKIKSALGWKPQ 304 >gi|149204257|ref|ZP_01881224.1| UDP-glucose 4-epimerase [Roseovarius sp. TM1035] gi|149142142|gb|EDM30189.1| UDP-glucose 4-epimerase [Roseovarius sp. TM1035] Length = 327 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 59/354 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAG+IGS C+ L V + T G +++K F Q D+ D Sbjct: 3 HILVTGGAGYIGSHACKTLAAAGYTPVTYDNLCT--GWQDAVK------FGPFEQGDLTD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++P A+++FAA S V S+ + N+ G+ L++ + CL Sbjct: 55 RARLDQVFATYRPAAVMHFAALSQVGESMRDPGLYWHNNVAGSLCLIQAA-VAAGCLD-- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP--- 178 F+ ST YG D L E P + Y A+K + + ++ +G +G+ Sbjct: 112 ------FVFSSTCATYGDQDNVLLDEGCVQAPINAYGASKRAIEDMLCDFGAAFGLRHVI 165 Query: 179 -----VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 V ++ G +H PE LIPL + I G + ++G DG +RD++ Sbjct: 166 FRYFNVAGADPEGEIGEFHQPETHLIPLMLD-AIAGKRDALTIFGTDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-EL 280 +V D V A L LK G+ +N+G + GF + +I +S + T Sbjct: 225 HVSDLVDAHVLGLKWLEAGKESRIFNLGTGS-----------GFSVREVIDQSAAVTNRA 273 Query: 281 IRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +E RPG R S++ +E+GW P+ + T+ + + W W Sbjct: 274 VPVVEGQRRPGDCTRLVSGSTRAAAELGWTPKRS-------TLAQMIGDAWRWH 320 >gi|300781023|ref|ZP_07090877.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] gi|300532730|gb|EFK53791.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] Length = 323 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 41/325 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 RL+VTGGAG++GS + LV + V +ID + GN +++ + ++ L D+ D Sbjct: 3 RLVVTGGAGYVGSVCSKVLV-EAGHDVTIIDDFS-TGNRDAV--VPEATLVEGTITDVID 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D +++FAA S V S+ DE+ N + + LL R Sbjct: 59 D--VLGDRSGGPVDGVLHFAARSLVGESVEKPDEYWRDNFVTSLALLNAMR--------- 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 + + ST YG + +EDMP P++PY A+K + DY + ++ +G+ Sbjct: 108 DHNVNSLVFSSTAATYGEPEHVPITEDMPTAPTNPYGASKLAIDYAMSSYAAAFGLGATS 167 Query: 181 -----LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLYV 226 ++ YG H E LIPL + ++ +G + ++G DG VRD++++ Sbjct: 168 LRYFNVAGAYAGYGERHATETHLIPL-VLQVAQGKREKILIFGDDWPTADGTCVRDYIHI 226 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L+ G +N+G + +++ + IP + Sbjct: 227 RDLADAHMLALEANTPGTHKIFNLGSGDGYSVKEVIETCRSVTGHDIPAEVA-------- 278 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S + K E+GW P Sbjct: 279 PRRAGDPATLIASSQRAKDELGWNP 303 >gi|309790554|ref|ZP_07685110.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] gi|308227405|gb|EFO81077.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6] Length = 312 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 12/224 (5%) Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE---DMPYNPSSPYSATKASS 164 LE L ++ L + + + S+ EVYG + + L SE D Y SPYSA+K + Sbjct: 87 LENISLCFNVLEYCRVQRLPIIFASSREVYGDIHRYLTSETSADFSYT-ESPYSASKIAG 145 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 + L+ ++ Y +P L+ SN YG Y E++IPL + R+ +G + +YG + + Sbjct: 146 EALIYSYARCYDLPYLIFRFSNVYGRYDSDIERMERVIPLFMRRIAQGEPITIYGR-EKI 204 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 D+ YV+D V + +++ G N N + + + LL A + + + Sbjct: 205 LDFTYVDDCVDGIVRGIERLHAGRLRNRTINLAYGEGNSLVRMAELLGAALGR---QPNM 261 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I RPG R Y D S + +G+ PQ N+ GL + V W+ Sbjct: 262 IVEASKRPGEVRYYVADISLARELLGYTPQVNLAEGLRRAVAWW 305 >gi|255025972|ref|ZP_05297958.1| hypothetical protein LmonocytFSL_05765 [Listeria monocytogenes FSL J2-003] Length = 100 Score = 86.3 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 68/100 (68%), Gaps = 1/100 (1%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M L+VTGGAGFIGS +++N +V+ +D LTYAG +++L++I ++ F++ +I Sbjct: 1 MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHVFVEGNI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 CD + ++ + + + D IVNFAAESHVDRSI+ FI T Sbjct: 61 CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIET 100 >gi|254294159|ref|YP_003060182.1| GDP-mannose 4,6-dehydratase [Hirschia baltica ATCC 49814] gi|254042690|gb|ACT59485.1| GDP-mannose 4,6-dehydratase [Hirschia baltica ATCC 49814] Length = 372 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 44/347 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 R ++TG G GS L +L+ + +V I + + N + I Q + F Sbjct: 3 RALITGVTGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTQRVDHIYQDPHTDNQRFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE +PD + N A+SHV S + + IGT LLE R Sbjct: 62 GDLTDTSNLTRIMKEVEPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P++P SPY+ K + ++ + + +YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGEVQEIPQKETTPFHPRSPYAVAKMYAYWIAVNYRESYG 175 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S+ G F + I ++ + G LY G+ +RDW + +D+VR Sbjct: 176 MYACNGILFNHESSRRGET-FVTRKITRGLSNIALGLEKCLYMGNIDALRDWGHAKDYVR 234 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVF----EIGFLLDALIPKSYSHTELIRFIED- 286 +++L++ + E + I + + + E+G L + K + IE Sbjct: 235 MQWMMLQQDQ-AEDFVIATGKQISVREFIVMSAKELGISL-SFEGKGLEEKATVTHIEGD 292 Query: 287 -------------------RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D SK K ++GW P+ +E Sbjct: 293 KAPALNEGDVIVQIDPRYFRPAEVETLLGDPSKAKEKLGWVPEITVE 339 >gi|146278459|ref|YP_001168618.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] gi|145556700|gb|ABP71313.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17025] Length = 337 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 37/332 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ +V+ +D G++ +++ + F ++ D+ Sbjct: 10 ILVAGGAGFVGSHLCETLLRQGH-RVICLDSF-LTGSMENVQALCNFREFRLIRQDVV-- 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E +R L E Q I N A+ + + + TN++GT + L+ + Sbjct: 66 EPLR--LSE-QVQQIYNLASPASPPQYQADPVHTMMTNVVGT----------QNLLALAE 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYGI 177 RFLQ ST EVYG + ED N S + Y K +++ L + Sbjct: 113 AHGARFLQASTSEVYGDPEIHPQPEDYRGNVSCTGSRACYDEGKRAAETLCFDYRRRDRA 172 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V ++ N YGP+ P+ +++ + + ++G + +YG G R + YV D V L Sbjct: 173 DVRVARIFNTYGPHMRPDDGRIVSNLLVQALQGVPLTIYGTGAQTRSFCYVTDLVAGLMA 232 Query: 236 VLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHDR 292 ++ E N+G E + E+ L+ L+P + H L ED P R Sbjct: 233 LMAVDEAPEGAINLGNPGEFT----IAELADLVQRLVPSAAGVVHRPLP---EDDP---R 282 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D S+ K +GW P+ + GL +T W+ Sbjct: 283 RRRPDISRAKRLLGWEPRVPLSEGLPQTAAWF 314 >gi|313884817|ref|ZP_07818569.1| UDP-glucose 4-epimerase [Eremococcus coleocola ACS-139-V-Col8] gi|312619508|gb|EFR30945.1| UDP-glucose 4-epimerase [Eremococcus coleocola ACS-139-V-Col8] Length = 338 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 47/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL--NSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+ V+++D + + L + +++IS + F F Q Sbjct: 1 MSILVTGGAGYIGSHTVIELLA-TNYDVVIVDDFSNSKPLVLDRIRQISGKD-FEFYQGS 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+E +RS K Q +A+++FAA V S+ ++ NI G+ LLE + Sbjct: 59 ILDKEFLRSVFKTHQIEAVIHFAAFKAVGESVAQPLKYYHNNIEGSVSLLE-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLV----LAWGH 173 + K + F + +T VYG + EDMP Y ++PY +K ++ LV ++ Sbjct: 112 QEFKVNHFIYSSSAT--VYGLNNPSPLKEDMPTYQATNPYGYSKIVNEQLVQDLEISQPE 169 Query: 174 TYGIPVLLSNCSNNY-------GPYHFPEKLIPLAITRMIEGSHVFL--------YGDGQ 218 + I + N + P P L+P IT++ G +L DG Sbjct: 170 FHSIRLRYFNPIGAHESGLIGEDPQGIPNNLMPY-ITQVAIGKRDYLSVFGDDYDTADGT 228 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV+AL + + + G +N+G +D+V IP Sbjct: 229 GVRDYIHVVDLAKGHVKALEWLARNQKSG-VFNLGTGQGVSVLDLVKAFEEANQIEIP-- 285 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 + + RPG D S+ ++GW ++N+ Sbjct: 286 ------YKIVARRPGDIATCFADPSRANDQLGWQAEKNI 318 >gi|300858637|ref|YP_003783620.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41] gi|300686091|gb|ADK29013.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41] gi|302206346|gb|ADL10688.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231] gi|302330903|gb|ADL21097.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002] Length = 327 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 64/336 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V ++D + GN ++ + + ++ DI Sbjct: 1 MKLLVTGGAGYVGS-VCAAVLLEQGHEVTIVDNFS-TGNKEAVPAGA-----TLIEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ A + DA+++FAA S V S+ E+ N + T LL+ R Sbjct: 54 DKAGEVLASDSY--DAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMR-------A 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +K F ST YG +ED P P++PY ATK + D+ + ++ YG+ Sbjct: 105 NKVTNLVFS--STAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSAT 162 Query: 181 LSNCSNNYGPY-------HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N G Y LIPL + + + ++G DG VRD++++ Sbjct: 163 SLRYFNVAGAYGSIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D A L ++ + G I +F +G + +S ++I+ D Sbjct: 223 RDLADAHVLAMESNKPG-------------IHRIFNLGS------GEGFSVKQVIKACRD 263 Query: 287 RPGH-------DRRYA------IDSSKIKSEIGWFP 309 GH RR S+K +SE+GW P Sbjct: 264 VTGHPIPAEVAPRRAGDPAVLIASSAKAQSELGWNP 299 >gi|269966796|ref|ZP_06180870.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 40B] gi|269828614|gb|EEZ82874.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 40B] Length = 338 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 98/369 (26%), Positives = 157/369 (42%), Gaps = 60/369 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L I + +F+Q D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLDRIEKVCGVKPTFIQAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + ALK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKLAMVEALKSHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQNANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P ++++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALIP 272 VRD+++V D HV AL V K + YN+G N +D+V FE D +P Sbjct: 228 GVRDYIHVMDLSDGHVAALEKVGSKAGL-HIYNLGTGNGYSVLDMVKAFEAASGKD--VP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +E RPG D SK +E+GW +E T W W+ Sbjct: 285 --------YQLVERRPGDIAECWADPSKAMNELGWKATRTLEEMTGDT--------WRWQ 328 Query: 333 PLYKELKPD 341 + PD Sbjct: 329 STNPQGYPD 337 >gi|221124066|ref|XP_002157707.1| PREDICTED: similar to GDP-mannose 4, 6-dehydratase [Hydra magnipapillata] Length = 334 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 39/257 (15%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS LC YL+ N +IQ L DK + G L Sbjct: 12 LITGITGQDGSYLCEYLLEKGYEVHGIIRRSSSFNTGRIQHLYKDKAGHIGGNMHLH--- 68 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 D+ D C+ + + + +P I N AA+SHV S A+ + +GT L Sbjct: 69 --------YGDLTDSSCLLNIVSQTRPTEIYNLAAQSHVKVSFDLAEYTADADAMGTLRL 120 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE ++ C + + RF Q ST E+YG + + E P++P SPY K ++ Sbjct: 121 LEAVKI---C---NLIGEVRFYQASTSELYGKVHEIPQKETTPFHPRSPYGVAKLYGYWI 174 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV-----FLYGDGQNVRD 222 V + YG+ N+ P E + ITR + H+ + G+ +VRD Sbjct: 175 VTNYREAYGLHASNGILFNHESPRR-GETFVTRKITRAVAKIHLGLQDELVLGNIDSVRD 233 Query: 223 WLYVEDHVRALYLVLKK 239 W + +D+V A++L+L++ Sbjct: 234 WGHAKDYVEAMWLMLQQ 250 >gi|183222606|ref|YP_001840602.1| putative epimerase/dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912640|ref|YP_001964195.1| nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777316|gb|ABZ95617.1| Nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781028|gb|ABZ99326.1| Putative epimerase/dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 306 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 57/341 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TG +GF+GS L L +LK + F Q DI Sbjct: 5 QTLITGASGFVGSYL-----------------------LPALKTHGSYEIHCF-QGDIRS 40 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-ETRLWWSCLSQ 120 RE + LK+ QPD +++ AA++ V +I E N+ GT LLE RL C Sbjct: 41 RETVEDQLKKVQPDILIHLAAQAFVPNAIANPWETEEINVGGTLNLLEILHRLQKPC--- 97 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG-HTYGI 177 + L +S+ +VYG ++D E + P +PY+ +K +++ + ++ + Sbjct: 98 ------KMLYVSSADVYGKQNMDVLPLEESLLPKPVNPYAGSKLAAESFCRQYSEYSPSV 151 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRAL 233 V+++ N+ G E +IP +++IE G L GD RD+ +VED V Sbjct: 152 SVVIARPFNHIGIGQRKEFVIPNFCSQIIEAKYAGKKEILVGDLAPTRDFSHVEDIVAGY 211 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPG 289 ++++G GE YNI ER I ++++ L+ S E I+F+ D R Sbjct: 212 LTLIERGESGEIYNICSGEERS-------IRYMVEELVKFS---GENIKFLVDESRVRSS 261 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 R ++ K+KS +GW + ++ L K + +L++ ++ Sbjct: 262 ETSRVYGNNQKLKS-LGWKNKHSLSETL-KEIYDHLESEFF 300 >gi|251790430|ref|YP_003005151.1| NAD-dependent epimerase/dehydratase [Dickeya zeae Ech1591] gi|247539051|gb|ACT07672.1| NAD-dependent epimerase/dehydratase [Dickeya zeae Ech1591] Length = 335 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ +VTG AGFIG C+ L V+ ID L + SLKE + L F F Sbjct: 1 MKFLVTGAAGFIGFYTCQSLCAAGHT-VVGIDNLNSYYEV-SLKEARLAKLRALSGFRFE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + + + + + +++ AA++ V S+ + +N+IG +LE R Sbjct: 59 RIDIADSQAMTALFAAEKFERVIHLAAQAGVRYSLENPMVYAQSNLIGHLNVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG K F + D +P S Y+ATK S++ + ++ H Sbjct: 116 ------HHGVGHLIYASSSSVYGLNGKTPFATTDAADHPISLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + R++ G + +Y G RD+ YV D V + Sbjct: 170 YDLPTTGLRFFTVYGPWGRPDMALFKFTRRILAGEPIDIYNQGDMWRDFTYVTDIVEGVL 229 Query: 235 LVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 V+ + I R YNIG + + +D V + + Sbjct: 230 RVVDQ--IPTRNADWTVEGGSPATSSAPYRLYNIGNGSPVRLMDFV--------TALESA 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ + G + D+S + + G+ PQ + G+ V WY D Sbjct: 280 LGREAVKNFMPMQAGDVYQTYADTSDLFAVTGYRPQVGVNEGVRAFVDWYRD 331 >gi|312795020|ref|YP_004027942.1| dTDP-glucose 4,6-dehydratase [Burkholderia rhizoxinica HKI 454] gi|312166795|emb|CBW73798.1| dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) [Burkholderia rhizoxinica HKI 454] Length = 353 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/344 (25%), Positives = 144/344 (41%), Gaps = 41/344 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVT-AGHDVLCVDNF-YTGTKDNIAHLLDAPNFEMMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G L L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQQDPVQTTKTSVHGAINL----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 K+ + R LQ ST EVYG D + + Y NP S Y K ++ L + Sbjct: 109 KRVKARILQASTSEVYG--DPSMHPQREQYWGNVNPIGVRSCYDEGKRCAETLFADYYRQ 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + + ++ N YGP P +++ IT+ + G + +YGDG R + YV+D V Sbjct: 167 HRVDIRIARIFNTYGPRMHPADGRVVSNFITQALAGEALTVYGDGTQTRSFCYVDDLVDG 226 Query: 233 LYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ E N+G E +I E+ + A +P Y+ D P Sbjct: 227 LIRLMEAPSPFAEPVNLGNAAEVTIGEIAREVIRVTGARVPVRYAP-----LPADDP--- 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW--WRP 333 R+ D + +GW P + GL +TV +++ +RP Sbjct: 279 RQRCPDLTLAARRLGWSPTTTLADGLTRTVRYFVQRAALRVYRP 322 >gi|120601089|ref|YP_965489.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] gi|120561318|gb|ABM27062.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] Length = 335 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L R L+ + V+ +D L Y+ L + L + FSF + Sbjct: 1 MHVLVTGAAGFIGFHLSRRLLAEGH-TVVGLDNLNDYYSVQLKRDRLALLEDHRGFSFAE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ + + + +VN AA++ V SI ++ +N++G +LE R Sbjct: 60 IDMAHDDDMDQLFEREGFTHVVNLAAQAGVRYSIKNPRSYVQSNLVGFGNILEGCR---- 115 Query: 117 CLSQDKKDQFRFL-QISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 +Q + L S+ VYG FS D +P S Y+A+K +++ + + H Sbjct: 116 ------HNQVKHLVYASSSSVYGLNTTMPFSVHDNVDHPISLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + L ++EG + ++ GQ RD+ Y++D V + Sbjct: 170 YRLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGQMRRDFTYIDDIVEGVL 229 Query: 235 LVLK---------KGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+K G + YNIG NN E+G ++ L + Sbjct: 230 RVMKLNPTPNPAWTGSAPDPSTSTAPYRIYNIGNNN-------TVELGRFIEVL-EECLG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + ++ G+ P +E G+ V WY Sbjct: 282 KKAVKNMLPMQPGDVAATYADVDDLIADTGFRPATTVEEGVAAFVAWY 329 >gi|240139780|ref|YP_002964257.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acid epimerase) [Methylobacterium extorquens AM1] gi|240009754|gb|ACS40980.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acid epimerase) [Methylobacterium extorquens AM1] Length = 337 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQ 56 M +VTG AGFIG AL R L+ V D L+ Y L ++ ++QS F ++ Sbjct: 1 MHALVTGSAGFIGHALSRRLLAA-GFGVTGFDGLSPYYDVGLKRARQADLAQSPRFEAVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + +PD + + AA++ V S++ ++ N++G LLE R Sbjct: 60 ARLETPGALLDVMARVKPDLVFHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + K L ST YG F E D +P + Y+A+K +++ + ++ H + Sbjct: 116 --AHPVK---HLLVASTSSAYGGNASVPFRETDRAVSPLTLYAASKLANEAMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L +++ G + ++G+G RD+ +++D + A+ Sbjct: 171 RVPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLIDAIVA 230 Query: 236 VLKK--------GRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G + NIGG + + + IG L AL K+ Sbjct: 231 LSERPPPMPSEGGPVSAADTLSTVAPYRLVNIGGG---RPVRLDAMIGALEAALGRKA-- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ + PG R ++ +G P+ +E+G+ V WYLD Sbjct: 286 -ERVLKPLP--PGDVIRTHASPDLLRDLVGRLPETPLETGIPAFVRWYLD 332 >gi|168701899|ref|ZP_02734176.1| nucleoside-diphosphate-sugar epimerases [Gemmata obscuriglobus UQM 2246] Length = 311 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 136/326 (41%), Gaps = 29/326 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIGS L L + V V+D LT G +L IS + +Q + D + Sbjct: 6 LITGGAGFIGSHLADTLTAAGR-TVRVLDNLTT-GLPANLAHISPAP--ELVQGCVTDPD 61 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ D + + AA + V +S+ G + + R K Sbjct: 62 AVARAVAGC--DVVFHLAALASVAKSVEDPLASHAACATGALTVFDAAR---------KA 110 Query: 124 DQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + + YG + D+ E P SPY+A K + ++ A+ TYGI + Sbjct: 111 GVRRIVYAGSASAYGNASDEAGQDEATPLMALSPYAAAKLAGEFYAEAFARTYGIETVRL 170 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL- 237 N +GP + +I + + G ++GDG RD++YV D RAL L Sbjct: 171 RFFNVFGPRQRADSPYSGVIAIFAGLLAAGRVPTIHGDGLQSRDFVYVSDVARALVLAAD 230 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G G YN+G ++++ E+ +L +S RPG + Sbjct: 231 TPGVSGRVYNVGTGRSVNLLELIAELNAILGTSAVPVHSPA--------RPGDVKHSRAR 282 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCW 323 +I++++G+ P GL +TV W Sbjct: 283 IDRIRTDLGYAPAVPFAEGLRRTVEW 308 >gi|86738942|ref|YP_479342.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86565804|gb|ABD09613.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 327 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 82/353 (23%), Positives = 145/353 (41%), Gaps = 47/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL---FSFLQV 57 M++ VTGG+GFIGS V+D+L AG+ ++ + S+ + Sbjct: 3 MKIAVTGGSGFIGSH--------------VVDRLLDAGHDVLSLDVEHRPVDPRASYQHL 48 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +AL+ + A+ + A S+VD + + N+ GT + E R Sbjct: 49 DVLDLPAVTAALRGVE--AVFHIAGMSNVDFAFADPVRTVRLNVEGTGNICEAAR----- 101 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD----KGLFSEDMPYN---PSSPYSATKASSDYLVLA 170 + R L ST VYG++ +ED Y++TK +++ L+ + Sbjct: 102 ----QVGVRRVLFASTVWVYGAVGDRAGSAPLTEDAEITLGRAGHVYTSTKLAAELLLHS 157 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + TYG+P + YGP E ++ + + + G + + GDG R++++V D Sbjct: 158 YQQTYGLPFTILRYGIPYGPGMRDELVLARFVRKALNGESLTVAGDGLQFRNYVFVRDLA 217 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A L L + G+ +++ + + Y I + RPG Sbjct: 218 EAHVLALTPDAANTTLALEGSESVSVLEMARAV---------QEYFPGTAIEHMPARPGD 268 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 R I + + +GW P G+ + + WYL N RP + L P D Sbjct: 269 FRGREISAQRAAEVLGWRPTTPFSEGVRQYIEWYLANR---RPPAQALPPVGD 318 >gi|295687540|ref|YP_003591233.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756] gi|295429443|gb|ADG08615.1| NAD-dependent epimerase/dehydratase [Caulobacter segnis ATCC 21756] Length = 324 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 30/332 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 +IVTG AGF+G + L+ D V+ +D A +LKE S L F+ +++ Sbjct: 6 IIVTGAAGFVGYHVAERLL-DRGEAVIGVDVFN-AYYDPALKEARASRLDGRDAFTMVRM 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + E + + + +++ AA++ V SI + +N+ G +LE R Sbjct: 64 DIAEHEALAALVNASGAKQVIHLAAQAGVRYSIDNPFAYERSNLAGHLSVLEACR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYG--SLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG L+ F E P +P S Y+ATK S + L ++ Sbjct: 119 ----HAGVEHLVYASSSSVYGDRPLNGDGFKESDPAESPVSLYAATKRSCELLSQSYAKL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 YG P YGP+ P+ +M++G + +YG+G+ RD+ Y++D V + Sbjct: 175 YGFPQSGLRFFTVYGPWGRPDMAYYGFTEKMLKGQEIEVYGEGKMARDFTYIDDIVDGIL 234 Query: 235 LVL--KKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 VL + G E YNIG N+ +D++ A + K+ F +PG Sbjct: 235 GVLDNPPAQGGHEVYNIGDNDPVGLMDMI--------ATLEKALGIEAKKVFRPMQPGDV 286 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K+ + G+ P+ + GL + V W Sbjct: 287 TATYANIDKLHALCGYKPKVKLAEGLQRFVDW 318 >gi|262199233|ref|YP_003270442.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262082580|gb|ACY18549.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 311 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 149/337 (44%), Gaps = 46/337 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 MR +VTGGAGFIGS LC L++D +V+ D Y G+ +++ + F+ L+ D+ Sbjct: 1 MRTLVTGGAGFIGSHLCERLLDDGH-EVVCADNF-YTGSEDNIAHLRARPGFTLLRHDVV 58 Query: 60 ----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 C+ E I + A+ H R + + I T+++G LLE+ R+ Sbjct: 59 EPVPCEAERIYH---------LACPASPVHYQRDPV---KTIQTSVLGAMHLLEQCRVTG 106 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLA 170 + R L ST EVYG SE P P + Y K ++ L Sbjct: 107 A----------RLLIASTSEVYGDPTVHPQSESYWGHVNPIGPRACYDEGKRVAETLCFD 156 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + G+ + + N YGP +++ + + + G + +YGDG R + YV++ Sbjct: 157 YQRRDGVDIRVVRIFNTYGPRMAMNDGRVVSNFVVQALRGEPLTIYGDGNQTRSFCYVDE 216 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V + ++ + N+G E + I L + ++ + S + ++ + P Sbjct: 217 LVEGMVRMMNQDADTGPVNLGNPAE-------YTIRELAERVLTLTGSSSRVMH--QALP 267 Query: 289 GHDR-RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D R D ++ ++ + W P+ ++E GL +T+ ++ Sbjct: 268 ADDPVRRKPDIARARTLLEWTPRISLEQGLERTIAYF 304 >gi|254455421|ref|ZP_05068850.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211] gi|207082423|gb|EDZ59849.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211] Length = 327 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 35/322 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++I+TGGAGFIGS L +LV ++++ID L+ G L+++K S F++ DI Sbjct: 1 MKIIITGGAGFIGSHLAEFLVKKGH-KIVIIDNLS-TGRLSNIKTFKNS--IKFVKADIS 56 Query: 61 DRECIRSALKEFQPDAIV-NFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I ++ F+ +V + AA + + SI ++ +N++GT E S Sbjct: 57 K---IGKWIENFENTQVVYHLAALADIVPSIQNPKKYFESNVVGT-----ENIASASIKY 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + KK + ++ YG E P PY+ TK + +++ + YG+ V Sbjct: 109 KVKKVIYS----ASSSCYGIPKNYPTLETASIEPQYPYALTKNLGEQILIHYAKIYGVNV 164 Query: 180 LLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YG + + + + ++ + + GDG+ RD+ Y+ D ++A Y Sbjct: 165 TSLRLFNVYGTRSRTSGTYGAMFGVFLAQKLKNKPLTVVGDGKQKRDFTYISDVIQAFYK 224 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +K + + +N+G +IV +G IPK RPG + Sbjct: 225 AIKIKKNFQTFNLGTGKPVAVNEIVKLLG-CKSINIPK-------------RPGEPDLTS 270 Query: 296 IDSSKIKSEIGWFPQENMESGL 317 + +KIK E+ W P+ +++ G+ Sbjct: 271 ANITKIKKELNWKPKISIKQGI 292 >gi|88808092|ref|ZP_01123603.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 7805] gi|88788131|gb|EAR19287.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 7805] Length = 344 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 44/348 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+AL + L+ +V+ ID L L +++ ++ + F Sbjct: 9 ILVTGAAGFIGAALVQRLLKRGD-RVIGIDNLNSYYDPSLKQARLQTIEAMAPQGAWRFE 67 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++ + D + +P +VN AA++ V S+ +I +N++G +LE R Sbjct: 68 RLALEDGTALMELFAAERPRVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCR--- 124 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 125 ------HHGTEHLVYASSSSVYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTYSHL 178 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ L ++ G + ++ G+ RD+ Y++D V + Sbjct: 179 YQLPATGLRFFTVYGPWGRPDMAPMLFAKAILAGKPIRVFNHGKMQRDFTYIDDIVEGVL 238 Query: 235 LVLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 K +NI GNNE + E+ + ++ Sbjct: 239 RCCDKPASANPDFDPLAPDPATAAAPHRVFNI-GNNEPTPLMRFIEV-------MEQALG 290 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T + F +PG A D++ +++ +G+ P +E+G+ WY Sbjct: 291 TTAIKDFQPMQPGDVVATAADTTALEAWVGFKPYTPIETGVECFARWY 338 >gi|193214167|ref|YP_001995366.1| NAD-dependent epimerase/dehydratase [Chloroherpeton thalassium ATCC 35110] gi|193087644|gb|ACF12919.1| NAD-dependent epimerase/dehydratase [Chloroherpeton thalassium ATCC 35110] Length = 320 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 144/331 (43%), Gaps = 33/331 (9%) Query: 4 IVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGF+GS LC R++ K V+ ID GN +++ + + F F++ D+ + Sbjct: 8 VITGGAGFLGSHLCDRFIAEGHK--VIAIDNFI-TGNPDNIAHLMGNENFKFIKHDVTEF 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + E + D I++FA+ + + + + +GT L K Sbjct: 65 IYV-----EGKVDNILHFASPASPIDYLKLPIQTLKVGSLGTH----------KALGLAK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 RFL ST EVYG + E P Y K ++ + +A+ + + Sbjct: 110 AKGARFLLASTSEVYGDPLEHPQKETYWGNVNPIGLRGVYDEAKRFAESMTMAYHRYHNL 169 Query: 178 PVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + +P + + G+ + ++GDG R + YV D V ++ Sbjct: 170 DTRILRIFNTYGPRMRLNDGRALPAFVHSALNGTPMTVFGDGSQTRSFCYVSDLVEGIWR 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY- 294 +L E NIG +E +D E+ ++ L K TE+I ++ P D + Sbjct: 230 LLNSNET-EPVNIGNPDEITILDFAKEVQTIVKELTGKD---TEII--FKELPSDDPKVR 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D++K K +GW P N GL KT+ ++ Sbjct: 284 KPDNTKAKERLGWEPTINRAEGLRKTISYFF 314 >gi|78777092|ref|YP_393407.1| NAD-dependent epimerase/dehydratase [Sulfurimonas denitrificans DSM 1251] gi|78497632|gb|ABB44172.1| NAD-dependent epimerase/dehydratase [Sulfurimonas denitrificans DSM 1251] Length = 349 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 64/366 (17%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VND--------LKIQVLVIDKLTYAGNL 40 M+++VTG AGFIG L + L +ND +++ L IDK N Sbjct: 1 MKILVTGTAGFIGYHLAKELLLRGDEVVGLDNINDYYDVKLKYARLKELGIDKDDIKDN- 59 Query: 41 NSLKEISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 +++QS + F++ ++ D E I KE + DA+ N AA++ V SI +I Sbjct: 60 ----QLTQSKTYPNHKFIKANLEDAETINRLFKEEKFDALCNLAAQAGVRYSIENPHAYI 115 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSP 156 +N++G LLE +C + D K+ F S+ VYG F S D +P S Sbjct: 116 QSNVVGFLNLLE------ACRNYDVKN---FAFASSSSVYGLNKSQPFKSSDHSDHPVSL 166 Query: 157 YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGD 216 Y+ATK S++ + + H YG+ YG + P+ L ++ + ++ Sbjct: 167 YAATKKSNEMMAHTYAHLYGLHCTGLRFFTVYGEWGRPDMAPMLFADAILNDRAIKVFNH 226 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNID 258 G RD+ YV D V + V+ + YNIG N+ + +D Sbjct: 227 GNMSRDFTYVGDIVEGVIKVIDNQSTPSQKFDAATPNPSISSAPYKIYNIGNNSPVQLLD 286 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 I L +A+ ++ + F+ + G D + + ++ G+ P+ +++ G+ Sbjct: 287 F---IKTLENAIGKEAQKN-----FLPMQDGDVVSTYADVTDLMNDFGYKPETSLKVGIE 338 Query: 319 KTVCWY 324 K V WY Sbjct: 339 KFVKWY 344 >gi|237654447|ref|YP_002890761.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T] gi|237625694|gb|ACR02384.1| NAD-dependent epimerase/dehydratase [Thauera sp. MZ1T] Length = 357 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 144/334 (43%), Gaps = 27/334 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 ++TG AGFIGS L L+ L V+ +D + NL+ ++ + Q F+FL+ D Sbjct: 19 LITGAAGFIGSNLLETLLT-LDQTVVGLDNFATGHQRNLDEVRSVVTREQWARFAFLKGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E R A D +++ AA V RS+ TNI G +L R Sbjct: 78 IRELEDCRRACNGV--DYVLHQAALGSVPRSLADPITSNATNIDGFLNMLVAAR------ 129 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F+ ++ YG ED P SPY+ TK ++ + +YG Sbjct: 130 ---DEGVKSFVYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFARSYGFT 186 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +G P+ +IP +++G V++ GDG+ RD+ YV + V+A Sbjct: 187 TIGLRYFNVFGRRQDPDGAYAAVIPKWTAALLKGDTVYINGDGETSRDFCYVANAVQANI 246 Query: 235 LVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L R YN+ +R ++ +F + L + L+ S + E R G Sbjct: 247 LAATTSNPEARNQVYNV-AVGDRTTLNTLFLM--LRNNLLTHDVSPNVRPTYREFRAGDV 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R + K +S +G+ P +E G+ + V WYL Sbjct: 304 RHSQAATEKAQSLLGYAPSHTLEQGIAEAVDWYL 337 >gi|120596895|ref|YP_961469.1| NAD-dependent epimerase/dehydratase [Shewanella sp. W3-18-1] gi|120556988|gb|ABM22915.1| NAD-dependent epimerase/dehydratase [Shewanella sp. W3-18-1] Length = 335 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 91/351 (25%), Positives = 150/351 (42%), Gaps = 49/351 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L L +V+ ID L Y NL L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCL-LGHEVIGIDNLNDYYDVNLKLARLDLLQTLDNFHFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE I + +++ AA++ V S+ + +N+IG +LE R Sbjct: 60 LDLADREGIAALFARHAFQRVIHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFI---ED 286 V K R N D E G + P + S +L+ FI ED Sbjct: 231 VQAK------------PPRPNTDWTVEAGTPATSSAPYRVFNIGNGSPVQLLDFITALED 278 Query: 287 -------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D+S + +G+ P ++ +G+ + V WY Sbjct: 279 ALGIKANKNLLPMQPGDVHSTWADTSDLFDAVGYKPLMDINTGVAQFVDWY 329 >gi|269797722|ref|YP_003311622.1| UDP-glucose 4-epimerase [Veillonella parvula DSM 2008] gi|269094351|gb|ACZ24342.1| UDP-glucose 4-epimerase [Veillonella parvula DSM 2008] Length = 329 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/354 (25%), Positives = 150/354 (42%), Gaps = 57/354 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVKFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE +++FAA S V S+ + N++G++ L+E R Sbjct: 54 DPKLV-GIMKEHNILGVMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ ST VYG ED P++ Y TK + ++ + YG + Sbjct: 105 -TAGIKHFVFSSTAAVYGEPKVAPICEDAQLQPTNVYGRTKLMIEKMLSDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + H+ ++G DG VRD++ Sbjct: 164 ALRYFNAAGADPSGMIGEDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D A L L+KG + +N+G N GF + +I + T + Sbjct: 224 HVNDLAAAHVLAMDYLRKGGESQVFNLGSGN-----------GFSVKEIIETAKEVTGID 272 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +++ + R G S KIK+ +GW P+ + V + + W W Sbjct: 273 IPVQYGDRRAGDPGTLIASSEKIKNLLGWDPKFS-------NVADVIKDAWHWH 319 >gi|218128518|ref|ZP_03457322.1| hypothetical protein BACEGG_00088 [Bacteroides eggerthii DSM 20697] gi|217989242|gb|EEC55556.1| hypothetical protein BACEGG_00088 [Bacteroides eggerthii DSM 20697] Length = 343 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 163/340 (47%), Gaps = 32/340 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TG AGFIGS L L D +++++ID +Y G+ ++LK L++DI Sbjct: 2 MKVLITGAAGFIGSQLAHRLWKD-GVELVLIDNFSY-GSDDNLKFEDHDFTDEVLKIDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE I + Q D N A + + L E I N+ G +LE R++ Sbjct: 60 DREQIAGIFRNGQIDYAYNIAGIAPLPDCQLNPQEAIDVNVTGFVNILENARIYGVK--- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +Q ST+ +Y + + E+ P+ Y TK ++ ++ TYG+ V Sbjct: 117 ------KVIQASTNAMYENELEFPTVENEFKQPTLIYPNTKYCAELFAESYCKTYGMNVT 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHV----FLYGDGQNVRDWLYVEDHVRALYLV 236 +N YGP+ + P + MI + + DG+ RD++YV+D + L ++ Sbjct: 171 CLRFANVYGPHIDCLRKQPPFVGYMIRELYYNRIPVFHSDGKQRRDYIYVDDLIN-LAIL 229 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGF-LLDALIPKSYSHTE--LIRFIEDRPG---- 289 ++K + + N+ +N+ +++ +++I +++ IP +Y+ T ++ E G Sbjct: 230 VQKTKGFDCVNV-SSNQNYSVNEMYDITRQIMNKDIPATYTDTGNYWCKYPELYEGAFPI 288 Query: 290 ------HD-RRYAI-DSSKIKSEIGWFPQENMESGLNKTV 321 H+ +Y++ D++ + + GW P +M+ GL V Sbjct: 289 RNEILEHEVNKYSLCDNTLAREKYGWVPLVDMKQGLKNVV 328 >gi|301060769|ref|ZP_07201584.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] gi|300445166|gb|EFK09116.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] Length = 318 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 30/337 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + + +V+++D NL + K ++ + F ++DI Sbjct: 1 MKILVTGGAGFIGSNVVDGYIGAGH-EVVIMD------NLYTGKRVNVNPEARFYKLDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E +E +PD + + AA+ V S+ NI G LLE + S Sbjct: 54 SPEAAAVISRE-RPDILNHHAAQMSVPASVADPGFDADVNIRGFLNLLEA-----AVKSG 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG ++ E P P SPY+ TK S++ + + H YG+ Sbjct: 108 VKKVIF---ISSGGAVYGEAEEYPTPESYPPKPLSPYAITKYCSEHYLAYYRHQYGLHYT 164 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQN----VRDWLYVEDHVRAL 233 +N YGP P ++ + + +I G L ++ VRD+ +V D V A Sbjct: 165 TLRYANVYGPRQIPHGEAGVVAIFMNNLINGIQSMLNHFPEDERGMVRDYCFVGDVVSAN 224 Query: 234 YLVLKKGRIGERYNIG-GNNERKN--IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L +G + +NIG G R D +F IP+ S ++ RPG Sbjct: 225 LAALTRGS-DDFFNIGTGQGTRTGDLYDAIFNAVKRAGQAIPEEMSQ---MKKQLARPGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + K + W P+ + GL+KT+ W L+ Sbjct: 281 LKKSCLTIRKAVQSLNWQPRIKLAEGLDKTLKWRLNQ 317 >gi|91773971|ref|YP_566663.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91712986|gb|ABE52913.1| NAD-dependent sugar epimerase [Methanococcoides burtonii DSM 6242] Length = 299 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 26/251 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAG +GS YLV+ + +++T N +S S ++ DI Sbjct: 3 RILITGGAGQVGS----YLVDRFHEE----NEVTILDNYSSPTRKDVPEGVSVIKADI-- 52 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I + D I++ AA+ V RS+ NI+GT LLEE R Sbjct: 53 RDDISEHMS--NTDVIIHTAAQISVVRSMNEPFFDAQNNIMGTLNLLEEAR--------- 101 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + RF+ S+ YG+ K E P P SPY A+K + + + + YG+P Sbjct: 102 HANIERFVYFSSAATYGNPLKVPIGETHPQEPLSPYGASKLAGEKYCIMYNKAYGLPTTC 161 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIE----GSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N Y P P I++ I+ G+ ++GDG+ RD++YV D V + L++ Sbjct: 162 IRPFNIYSPRQDPSNPYSGVISKFIDKVSGGASPTIFGDGEQTRDFIYVRDIVDLVDLMI 221 Query: 238 -KKGRIGERYN 247 K+ IGE +N Sbjct: 222 SKRTAIGESFN 232 >gi|296270832|ref|YP_003653464.1| GDP-mannose 4,6-dehydratase [Thermobispora bispora DSM 43833] gi|296093619|gb|ADG89571.1| GDP-mannose 4,6-dehydratase [Thermobispora bispora DSM 43833] Length = 340 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 11/267 (4%) Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 ++ D+ D+ + +A+++ QPD + N A S+V S A+ +G +LE R+ Sbjct: 53 LIRGDLLDQGSLIAAVEKVQPDEVYNLGAISYVPMSWEQAELTAEVTGMGVLRMLEAIRV 112 Query: 114 WWSCLSQDKKD--QFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 + Q RF Q S+ E++G + + +E P++P SPY KA +L + Sbjct: 113 CSGITASRTPTGGQIRFYQASSSEMFGQVRETPQTELTPFHPRSPYGVAKAFGHFLTQNY 172 Query: 172 GHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVE 227 +YG+ + N+ P F + + L + R+ G + G+ RDW + Sbjct: 173 RESYGMFAVSGILFNHESPRRGVEFVTRKVSLGVARIKLGMAKELRLGNLDARRDWGFAG 232 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 D VRA++L++ + E Y IG D+V E+ F L + Y T+ + R Sbjct: 233 DFVRAMHLMVTAPK-PEDYVIGTGRMHSVRDLV-EVAFATVGLNWRDYVVTDPSLY---R 287 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENME 314 P D K K+++GW P+ + E Sbjct: 288 PAEVDLLCADPKKAKTQLGWEPKVSFE 314 >gi|89890419|ref|ZP_01201929.1| UDP-glucose 4-epimerase [Flavobacteria bacterium BBFL7] gi|89517334|gb|EAS19991.1| UDP-glucose 4-epimerase [Flavobacteria bacterium BBFL7] Length = 306 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 26/315 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TG AG +GSAL YL+ QV+ +D L+ GN++ L E F+F+++D+ Sbjct: 3 KTLITGVAGNVGSALAHYLLAKGN-QVVGVDNLS-TGNISKLPEDKN---FTFIKLDVNK 57 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + + + + ++AA V R++ + + +I G + L S + Sbjct: 58 YEELAEVMLSHKFHYVFHYAAMVGVQRTLDNPIK-VLQDIDGI-----KNILRLSKNTGV 111 Query: 122 KKDQFRFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK + S+ EVYG + ++ P N PY+ K + ++ YG+ Sbjct: 112 KKVAYS----SSSEVYGEPVSLPQIEDETPLNSKLPYAVVKNLGEAYFRSYHQEYGLDYT 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP + +IP + + + + +YGDG R + Y++D++ A Y + Sbjct: 168 IFRFFNTYGPQQSKDFVIPKLLHQALHNEDITIYGDGLQSRTFCYIDDNIEASYRIFSDD 227 Query: 241 RI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 + E +NIG D+V+ I L+D ++ + S++++I G R D+S Sbjct: 228 SLKNEVFNIGS-------DLVYNIKELVDVILKVTGSNSQIIHLPALEEGDMTRRQPDNS 280 Query: 300 KIKSEIG--WFPQEN 312 K+K+ + P EN Sbjct: 281 KMKAVLNRELIPLEN 295 >gi|224539292|ref|ZP_03679831.1| hypothetical protein BACCELL_04197 [Bacteroides cellulosilyticus DSM 14838] gi|224519081|gb|EEF88186.1| hypothetical protein BACCELL_04197 [Bacteroides cellulosilyticus DSM 14838] Length = 358 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E+YG + + SE P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--KIYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y +D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFKEVGIELRWEGEGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 E K ID+ + G L + PK + RP + + +K K+ +GW P++ Sbjct: 285 EEKGIDV--QTGKTLVEIDPKYF-----------RPAEVEQLLGNPTKAKTLLGWNPRQT 331 >gi|74316117|ref|YP_313857.1| NAD-dependent epimerase/dehydratase [Thiobacillus denitrificans ATCC 25259] gi|74055612|gb|AAZ96052.1| NAD-dependent epimerase/dehydratase [Thiobacillus denitrificans ATCC 25259] Length = 342 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 34/340 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-------NLFSFLQ 56 +VTG AGFIGS L L+ L +V+ +D G+ +L ++ S NL SF + Sbjct: 19 LVTGAAGFIGSNLVEALLR-LDQRVVGLDNFA-TGHEKNLAQVQASVGPARWANL-SFKR 75 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D A K D +++ AA V RSI N G +L R Sbjct: 76 GDIRDLITCHDACKGV--DYVLHQAALGSVPRSIEDPISTHAANNTGFLNMLVAAR---- 129 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D + + RF+ ++ YG ED+ P SPY+ TK ++ +G YG Sbjct: 130 ----DARVK-RFVYAASSSTYGDHPALPKVEDIIGKPLSPYAVTKLVNELYADVFGRCYG 184 Query: 177 IPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + N +G P+ +IP + MI G V++ GDG+ RD+ Y+++ ++A Sbjct: 185 MESIGLRYFNIFGRRQDPQGAYAAVIPKWVASMIHGEPVYINGDGETSRDFCYIDNVIQA 244 Query: 233 LYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI--EDR 287 L + YNI +R ++ +FE + +L+ + H ++ + + R Sbjct: 245 NLLAATSPHADAANQVYNI-AVGDRTTLNELFEA---IRSLLAPRFPHLADVKPVYRDFR 300 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G R D SK ++ +G+ P + GL + + WY+ + Sbjct: 301 SGDVRHSLADISKARTRLGYAPSHRIADGLAEAMDWYVQD 340 >gi|15226950|ref|NP_180443.1| NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] gi|42570963|ref|NP_973555.1| NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] gi|145329973|ref|NP_001077972.1| NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] gi|3927825|gb|AAC79582.1| putative nucleotide-sugar dehydratase [Arabidopsis thaliana] gi|20466474|gb|AAM20554.1| putative nucleotide-sugar dehydratase [Arabidopsis thaliana] gi|22136442|gb|AAM91299.1| putative nucleotide-sugar dehydratase [Arabidopsis thaliana] gi|330253073|gb|AEC08167.1| UDP-XYL synthase 6 [Arabidopsis thaliana] gi|330253074|gb|AEC08168.1| UDP-XYL synthase 6 [Arabidopsis thaliana] gi|330253075|gb|AEC08169.1| UDP-XYL synthase 6 [Arabidopsis thaliana] Length = 343 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 31 MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 89 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 90 EPLFV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 132 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 133 AKRVGARILLTSTSEVYG--DPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 190 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 191 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVE 250 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ + G NIG E +++ + L+ + I+ +E+ P Sbjct: 251 GLMRLMEGDQTGP-INIGNPGEFTMVELAETVKELIKPDVE--------IKMVENTPDDP 301 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D SK K +GW P+ + GL Sbjct: 302 RQRKPDISKAKEVLGWEPKVKLREGL 327 >gi|28898797|ref|NP_798402.1| nucleotide sugar epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|260365328|ref|ZP_05777879.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus K5030] gi|260880829|ref|ZP_05893184.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus AN-5034] gi|260897841|ref|ZP_05906337.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Vibrio parahaemolyticus Peru-466] gi|28807016|dbj|BAC60286.1| nucleotide sugar epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|308087592|gb|EFO37287.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Vibrio parahaemolyticus Peru-466] gi|308093628|gb|EFO43323.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus AN-5034] gi|308111248|gb|EFO48788.1| UDP-glucuronate 5'-epimerase [Vibrio parahaemolyticus K5030] Length = 336 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 54/354 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID--------KLTYAGNLNSLKEISQSNLF 52 M+ +VTG AGFIGSA R L N L +V+ ID +L YA LN +K + LF Sbjct: 1 MKYLVTGAAGFIGSATIRKL-NSLGYEVIGIDNINDYYDVELKYA-RLNFIK----NPLF 54 Query: 53 SFLQVDICDREC--IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F +DI ++ I ++ + D +++ AA++ V S++ + +N+ G +LE Sbjct: 55 RFFNMDISNKNKNEIERLFEKEKFDRVIHLAAQAGVRYSLVNPHCYAESNLSGFLNVLEA 114 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R K F+ S+ VYG K FS D +P S Y+ATK S++ + Sbjct: 115 CR---------KSHIKHFIYASSSSVYGLNKKVPFSTSDNVDHPVSLYAATKKSNELMAH 165 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAIT-RMIEGSHVFLYGDGQNVRDWLYVED 228 ++ H Y +P YG + P+ + P T ++I G + + +G RD+ ++ D Sbjct: 166 SYSHLYQLPTTGLRFFTVYGSWGRPD-MAPFIFTEKIINGQSIDINNNGDMWRDFTHIND 224 Query: 229 HVRALYLVLKK-GRIGER-----------------YNIGGNNERKNIDIVFEIGFLLDAL 270 V + + RI +R YNIG + +D + I L Sbjct: 225 IVEGIVRISDVIPRINQRWQFENSTPADSSAPYSIYNIGYGSPICLMDFIKAIENELGIE 284 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+Y E +PG + D++ G+ P ++E G+ + V WY Sbjct: 285 AKKNYR--------EMQPGDVYQTYADTTAFYQATGYRPSVSVEEGIAEFVAWY 330 >gi|218441151|ref|YP_002379480.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] gi|218173879|gb|ACK72612.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] Length = 332 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAG+IGS + L V+V+D L Y ++I++ L + L V DI D Sbjct: 8 ILVTGGAGYIGSHAVKAL-QQAGYGVIVLDNLVYGH-----RDIAEKVLEAELIVGDISD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + A+++FAA ++V S+ ++ N++GT LLE + ++ + Sbjct: 62 RPFLDDLFSRYPIAAVMHFAAYAYVGESVSDPAKYYRNNVMGTLTLLE------AMVAAN 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K R + ST YG +ED P NP +PY +TK + ++ + YG+ + Sbjct: 116 VK---RIVFSSTCATYGVPQFMPLTEDHPQNPINPYGSTKLMVEKILADFDRAYGLKSVC 172 Query: 182 --------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLY 225 ++ G H PE LIPL +T + + ++G DG +RD+++ Sbjct: 173 FRYFNAAGADPEGKLGEDHQPETHLIPLVLLTALGRRDAISIFGTDYPTPDGTCIRDYIH 232 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 V D A L L+ +G +N+G N GF + +I + + T + I Sbjct: 233 VVDLADAHILGLEYLLEGEESNIFNLGNGN-----------GFSVREVIETAKTVTGKSI 281 Query: 282 RFIE--DRPGHDRRYAIDSSKIKSEIGWFPQ 310 + +E RPG S K + +GW PQ Sbjct: 282 KVLECDRRPGDPPVLVGSSEKAQKILGWQPQ 312 >gi|47096069|ref|ZP_00233670.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 1/2a F6854] gi|254828052|ref|ZP_05232739.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N3-165] gi|254900385|ref|ZP_05260309.1| UDP-glucose 4-epimerase [Listeria monocytogenes J0161] gi|254913376|ref|ZP_05263388.1| UDP-glucose 4-epimerase [Listeria monocytogenes J2818] gi|254937757|ref|ZP_05269454.1| UDP-glucose 4-epimerase [Listeria monocytogenes F6900] gi|47015530|gb|EAL06462.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 1/2a F6854] gi|258600436|gb|EEW13761.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N3-165] gi|258610360|gb|EEW22968.1| UDP-glucose 4-epimerase [Listeria monocytogenes F6900] gi|293591382|gb|EFF99716.1| UDP-glucose 4-epimerase [Listeria monocytogenes J2818] Length = 327 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELIT-RGYEVVVIDNLR-TGHRESIHKKAK-----FCEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D + S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 EEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+RAL LK G +N+G +N F + +L+A ++ + E+ Sbjct: 225 QVEDLIDAHIRALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTGKEI 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 + R D I SS EI GW P Sbjct: 275 PAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|152991158|ref|YP_001356880.1| NAD-dependent epimerase/dehydratase [Nitratiruptor sp. SB155-2] gi|151423019|dbj|BAF70523.1| NAD-dependent epimerase/dehydratase [Nitratiruptor sp. SB155-2] Length = 350 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 76/361 (21%), Positives = 153/361 (42%), Gaps = 54/361 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVN---------------DLKIQVLVIDKLTYAGNLNSLKE 45 M+++VTG AGFIG L + L+ D++++ + +L + + + Sbjct: 1 MKILVTGTAGFIGFHLAKRLLGRGDEVVGIDNINDYYDVRVKYGRLKELGFEEEKFAFGK 60 Query: 46 ISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 S + +F ++D+ D+ + ++ P + + AA++ V S+ D +I +N + Sbjct: 61 KYVSTKYPKHTFYRIDLADKTALEEVFQKENPQRVCHLAAQAGVRYSLTNPDAYIQSNFV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATK 161 G +LE C + + + S+ VYG ++ FS ED +P S Y+A+K Sbjct: 121 GFANILE-------CCRHHEVEHLAY--ASSSSVYGLNERMPFSVEDNVDHPISLYAASK 171 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVR 221 S++ + + H + IP YGP+ P+ + L ++E + ++ G+ R Sbjct: 172 KSNELMAHTYSHLFNIPTTGLRFFTVYGPWGRPDMALFLFTKAILEDKPIDVFNYGKMKR 231 Query: 222 DWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEI 263 D+ Y++D V + V+ + YNIG + + +D + Sbjct: 232 DFTYIDDIVEGVVRVIDNPPKSDPCWSARRPNPASSKAPYRVYNIGNGSPVELMDFI--- 288 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I K+ + +PG D+ ++ ++G+ P +E G+ K + W Sbjct: 289 -----KAIEKTLGKEAKKNLLPIQPGDVPATWADTYALEHDLGYKPSTPIEEGVKKFIEW 343 Query: 324 Y 324 Y Sbjct: 344 Y 344 >gi|209542825|ref|YP_002275054.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] gi|209530502|gb|ACI50439.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] Length = 334 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 53/332 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TGGAG++GS + L D +V+V D L G+ S+ E + ++ D+ D Sbjct: 6 RFLITGGAGYVGSHVVAAL-RDEGHKVVVFDNLR-TGHRESVPED-----VALIEGDLVD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R I S L + D +++FAA S V S+ ++ N F L++ +C+ Sbjct: 59 RALIDSVLADGPWDGVLHFAALSLVGESMQQPLRYMEANAGLGFTLID------ACVRNG 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ ST ++G + L +ED P P SPY +K + +L +G L Sbjct: 113 VK---RFVFSSTAALFGQTEDPLITEDTPIIPGSPYGESKHMVERALLWADRIHG---LR 166 Query: 182 SNC-----------SNNYGPYHFPE-KLIPLAITRMIEGSHVF-LYG------DGQNVRD 222 S C G H PE LIPL I + L+G DG +RD Sbjct: 167 SACLRYFNAAGADPGGRIGEDHRPETHLIPLVIDAALGRRDALQLFGNDYPTPDGTCIRD 226 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D H+ AL ++ + + YN+G N+D++ + + +P + Sbjct: 227 YVHVSDLAHAHLAALEVIRDRSVV---YNVGTGTGHSNMDVIRSVERVTGQPVPWCLA-- 281 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R + +++ E W P+ Sbjct: 282 ------PRRQGDPARLVAGAERLRRETSWSPR 307 >gi|315151697|gb|EFT95713.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0012] Length = 320 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I +++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVVLGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|294011102|ref|YP_003544562.1| dTDP-glucose 4,6-dehydratase [Sphingobium japonicum UT26S] gi|292674432|dbj|BAI95950.1| dTDP-glucose 4,6-dehydratase [Sphingobium japonicum UT26S] Length = 357 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 49/353 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV--DIC 60 ++VTGGAGFIG + L + + QV+V D L G +L + Q + + V D+ Sbjct: 9 VLVTGGAGFIGCNIADRLAGEGE-QVVVYDSLARPGVERNLAWLEQRHGAAITPVIADVR 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ + A+ + AA+ V S N +GT +LE R Sbjct: 68 DDAAVDRAVAGAK--AVFHMAAQVAVTTSFTDPRADFEVNALGTLNVLEAAR-------- 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSS------------------PYSATK 161 + + ST++VYG L+ F D Y P+S PY +K Sbjct: 118 RRSTPPPVIFASTNKVYGGLEDLDFPLIDGAYQPASEHLRANGIDESRPLDFHTPYGCSK 177 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQ 218 ++D VL + ++G+P + S YG + + + +EG + LYGDG Sbjct: 178 GAADQYVLDYARSFGLPAAVLRMSCIYGQRQMGTEDQGWVAHFLISALEGQPITLYGDGH 237 Query: 219 NVRDWLYVEDHVRALYLVLKK-GRIGER-YNIGG--NNERKNIDIVFEIGFLL-DALIPK 273 VRD L V+D V A V ++ GR+G R +N+GG +N I+ IG L +++P Sbjct: 238 QVRDILDVQDAVDAYLAVWRQIGRVGGRAFNLGGGPDNAVSLRQILAFIGVHLGKSIVPD 297 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 F R G R + D+ ++ + ++ G+ W ++ Sbjct: 298 ---------FAPWRAGDQRYFVADTGAARTALNLKARKPWRQGVADLARWLME 341 >gi|213964483|ref|ZP_03392683.1| UDP-glucose 4-epimerase [Corynebacterium amycolatum SK46] gi|213952676|gb|EEB64058.1| UDP-glucose 4-epimerase [Corynebacterium amycolatum SK46] Length = 327 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 142/331 (42%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ L V ++D + GN +++ E + + ++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSAVLISLGHNVTILDNFS-VGNRDAVPEGA-----TLVEGDVE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + F D +V+FAA+S V S+ ++ N+ T LL+ R Sbjct: 54 DKAYEVLSSDSF--DGVVHFAAKSLVGESVEVPSDYWHNNVGQTLKLLDAMR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST YG +K +EDMP P++PY ATK + DY + ++ Y I Sbjct: 104 -DTGTNNLVFSSTAATYGEPEKTPITEDMPTAPTNPYGATKLAMDYAIASYAKAYNIGAT 162 Query: 181 ---LSNCSNNYGPY----HFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 N + +G + LIPL + + + ++G DG VRD++++ Sbjct: 163 SLRYFNVAGAWGGFGENREVETHLIPLVLQVALGHRDKIMVFGNDWPTPDGTAVRDYIHI 222 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 +D A L L+ G +N+G + GF + +I T Sbjct: 223 KDLADAHVLALESNTPGTHRIFNLGSGD-----------GFSVRQVIETCRKVTGHPIPA 271 Query: 285 EDRP---GHDRRYAIDSSKIKSEIGWFPQEN 312 ED P G S + E+GW P Sbjct: 272 EDAPRRAGDPATLIASSQRAMDELGWKPNHT 302 >gi|260807541|ref|XP_002598567.1| hypothetical protein BRAFLDRAFT_118331 [Branchiostoma floridae] gi|229283840|gb|EEN54579.1| hypothetical protein BRAFLDRAFT_118331 [Branchiostoma floridae] Length = 379 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 40/339 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI---------SQSNLFSF 54 ++TG +G GS L +L L+ V L A N+ + + ++SN F Sbjct: 33 LITGISGQDGSYLAEFL---LEKGYEVHGILRRASTFNTGRIVHLYGNPQTHTESNNFHL 89 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D C+ + E +PD + N AA+SHV S A+ T N+ G +L R+ Sbjct: 90 HYGDMTDSTCLMKVIAEVRPDEVYNLAAQSHVKVSFDLAE--YTANVDGVGVL----RIL 143 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + + D RF Q S+ E++G + + E P+ P SPY A K + ++V+ + Sbjct: 144 DAIRATGLSDTTRFYQASSSEMFGLVQEVPQRETTPFYPRSPYGAAKLYAYWVVVNYREA 203 Query: 175 YGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVED 228 Y + +L ++ S G F + I + +++ G +H+ L G+ RDW + +D Sbjct: 204 YDMFACNGILFNHESPRRGET-FVTRKITRGVAKILLGQQNHITL-GNLDAKRDWGHAKD 261 Query: 229 HVRALYLVLKKGR-------IGERYNIG----GNNERKNIDIVFEIGFLLDALIPKSYSH 277 +V+A++L+L+ + G Y++ + + +DI++E G LD + + Sbjct: 262 YVKAMWLMLQHEKPEDFVIATGTSYSVREFVVASFKHIGVDIIWE-GTGLDEVGKDRTTG 320 Query: 278 TELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENME 314 T +R + RP DS+K + +GW P + E Sbjct: 321 TVRVRVSKKYYRPAEVEFLQGDSTKARKTLGWKPSVSFE 359 >gi|260184968|ref|ZP_05762442.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis CPHL_A] gi|289445642|ref|ZP_06435386.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis CPHL_A] gi|289418600|gb|EFD15801.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis CPHL_A] Length = 318 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 45/343 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDI 59 M++ +TG G +GS L L L YA I S+L F+ +VDI Sbjct: 1 MKVWITGAGGMMGSHLAEML--------LAAGHDVYATYCR--PTIDPSDLQFNGAEVDI 50 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + ++ F+PDA+ + AA+S+ S E +TTN++GT I+ E R Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR------- 103 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + + YG +D +E P PY +KA++D L + +YG+ Sbjct: 104 -RVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGM 162 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLA-----ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +++ N GP + L + E S + + G+ + R + V D RA Sbjct: 163 HTVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRA 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPG 289 L L+L KG G YN+GG+ I +E+G +L +I + +++ + RP Sbjct: 222 LMLMLDKGEAGADYNVGGS-------IAYEMGDVLKQVI-AACKRDDIVPEVGPALLRPT 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 ++ D SK+ + GW E L +T+ D +WR Sbjct: 274 DEKIIYGDCSKLAAITGW----QQEICLTQTIADMFD---YWR 309 >gi|219849036|ref|YP_002463469.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543295|gb|ACL25033.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 316 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 40/335 (11%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR+++TGGAGF+GS LC R+L V+ +D L G+ +++ ++ F F+ D+ Sbjct: 1 MRILITGGAGFLGSHLCDRFLAEGHT--VIAMDNLI-TGSTDNIAHLAGHPRFLFIHHDV 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + I + DA+++FA+ + + + + +GT L Sbjct: 58 TNYIYIEGPI-----DAVLHFASPASPIDYLELPIQTLKVGALGT----------HKALG 102 Query: 120 QDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RFL ST EVYG + + P P Y K ++ + +A+ Sbjct: 103 LARAKGARFLLASTSEVYGDPQVHPQPESYYGHVNPVGPRGVYDEAKRFAEAMTMAYHTY 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP +++P I++ + G + +YGDG R + YV D V Sbjct: 163 HGVETRIVRIFNTYGPRMRLRDGRVVPNFISQALRGEPLTIYGDGSQTRSFQYVSDLVEG 222 Query: 233 LYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 +Y +L + E NIG E + IV EI +I + +D P Sbjct: 223 VYRLLFSDEV-EPVNIGNPGEFTIAEFAQIVNEITGNKAGVIYRDLR-------TKDDP- 273 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D SK + + W P+ ++ GL T+ W+ Sbjct: 274 --QVRQPDISKARRILQWEPKVSLREGLELTIPWF 306 >gi|271967768|ref|YP_003341964.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM 43021] gi|270510943|gb|ACZ89221.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM 43021] Length = 332 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 31/331 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGG+GF+GS L L+ V+++D L+ G L +L + + + + D Sbjct: 10 LITGGSGFVGSHLTDALLARGD-SVVILDNLS-TGRLANLAHAAGNPRLRIVHGSVLDEL 67 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + D +V+ AA V + +TTNI G+ I++E + Sbjct: 68 MVDELV--HRCDVVVHLAAAVGVKLIVEQPLRSLTTNIRGSEIVIEAAHRY--------- 116 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHTYGI 177 + + L ST E+YG G +E SP YS KA + L A+ G+ Sbjct: 117 -RRKILVTSTSEIYGKNSSGPLTELSDRILGSPAVVRWAYSTAKAVDEILANAYHRERGL 175 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P ++ N GP P +IP + + + ++GDG R + +V D V AL Sbjct: 176 PTIIVRLFNTVGPRQSPAYGMVIPRLVRQAAGDVPLTVFGDGTQTRCFAHVGDVVEALVK 235 Query: 236 VL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DRPGHD- 291 +L G +G+ +N+G N+E + E+ ++ L + + +LI + E ++ D Sbjct: 236 LLDHDGAVGQTFNVGSNDEVS----ILELAKMIIELT-GTTAGVDLISYAEAYEKGFEDM 290 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 R D++K++ GW P+ ++ L +++ Sbjct: 291 TRRVPDTTKLRELTGWVPKRSLNDILTESIA 321 >gi|253999527|ref|YP_003051590.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] gi|253986206|gb|ACT51063.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] Length = 327 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 52/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS + + L+ + V+ D L+ +G +++ +F+Q D+ Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGH-DVITFDNLS-SGYRDAVVG------GTFVQADLA 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + PDA+++FA+ V S+ D++ N T LL+ + Sbjct: 53 DKAALEEVFVKHAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLD---------AM 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F+ ST V+G + E NP +PY +K + + + YGI + Sbjct: 104 VKHGVNYFIFSSTAAVFGEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRDW 223 ++ G H PE LIPL + + I G ++ ++G DG +RD+ Sbjct: 164 CLRYFNAAGADPEGQLGERHEPETHLIPL-VLQAISGRRDNITVFGRDYDTPDGTCIRDY 222 Query: 224 LYVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +++ D A L L+K I RYN+G GF + +I + T + Sbjct: 223 IHIVDLCSAHSLALRKLMETNISRRYNLGNG-----------AGFSVQEVIAAAQKVTGK 271 Query: 280 LIRFIED--RPGHDRRYAIDSSKIKSEIGWFP 309 I+ E R G R D+S +SE+GW P Sbjct: 272 PIKVAEGERREGDPARLVADASLARSELGWKP 303 >gi|33861764|ref|NP_893325.1| gdpmannose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640132|emb|CAE19667.1| GDPmannose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 357 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I +KE +PD I N AA+SHV S + + +GT +LE R+ Sbjct: 66 DLVDSTNIIRLIKEIEPDEIYNLAAQSHVAVSFETPEYTANCDALGTLRILEAVRI---- 121 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L+ +KK + Q ST E+YG + K +ED P+NP SPY K S +++ + YGI Sbjct: 122 LNLEKKT--KIYQASTSELYGRVCKSPQNEDTPFNPQSPYGVAKLYSYWIIKNYRDAYGI 179 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I + R+ G LY G+ ++RDW + +D+V+ Sbjct: 180 YACNGILFNHESPRRGETFVTRKITRGLVRIDSGIDEILYLGNLNSLRDWGHAKDYVKMQ 239 Query: 234 YLVLKK 239 +L+L++ Sbjct: 240 WLMLQQ 245 >gi|166368986|ref|YP_001661259.1| UDP-glucose 4-epimerase [Microcystis aeruginosa NIES-843] gi|166091359|dbj|BAG06067.1| UDP-glucose 4-epimerase [Microcystis aeruginosa NIES-843] Length = 332 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L N V+V+D L+Y G+ +K+I + L + D DR Sbjct: 8 ILVTGGAGYIGSHAVLALKN-AGYSVIVLDNLSY-GHAEIVKDILKVEL---IVGDTRDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+++FAA V S+ + N+ G+ LL+ + ++ D Sbjct: 63 SLLDNLFASRDIAAVMHFAAFIAVGESVQEPAIYYQNNVSGSLTLLQ------AMIAADV 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K +F+ ST +YG + +E+ P++P SPY+A+K + ++ + YG+ + Sbjct: 117 K---KFVFSSTCAIYGMPKEIPMTENHPHHPLSPYAASKEMVEQILRDFDRAYGLKSVAF 173 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPLA +T + + ++ ++G DG VRD+++V Sbjct: 174 RYFNASGADPSGLLGEDHQPETHLIPLALLTALKKRDYLSVFGTDYDTPDGTAVRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-I 281 D HV L +L G +N+G N GF + +I + + T L I Sbjct: 234 NDLAQAHVLGLEYLLNGGE-SNVFNLGNGN-----------GFSVREVIETAQAVTGLDI 281 Query: 282 RFIED-RPGHDRRYAIDSS-KIKSEIGWFPQ 310 IE R D I SS K K +GW PQ Sbjct: 282 PVIESPRRAGDAPILIGSSDKAKQVLGWHPQ 312 >gi|153001843|ref|YP_001367524.1| UDP-glucose 4-epimerase [Shewanella baltica OS185] gi|151366461|gb|ABS09461.1| UDP-glucose 4-epimerase [Shewanella baltica OS185] Length = 342 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 44/353 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQSNLFSFLQVDI 59 M+++VTGGAG+IGS L+ QV+V D L A + + E F + DI Sbjct: 1 MKVLVTGGAGYIGSHTVLALLQQ-DHQVVVFDNLCNASEVPLARIEAMTGKHIEFFRGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + Q DA+++FAA V S + TN+ G+ LLE + L Sbjct: 60 RDVAALDAVFGAHQFDAVIHFAALKAVGESTQKPLAYYQTNVHGSVCLLE------AMLH 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT---- 174 D F+ S+ VYG L + E MP +PSSPY ATK + ++ + Sbjct: 114 HQVTD---FIFSSSATVYGELASVPYLESMPLGSPSSPYGATKVMVERIMADYAAANPEF 170 Query: 175 YGIPV-----LLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNV 220 G+ + + ++ S N G P P L+P LA + +H+ ++G DG + Sbjct: 171 RGVSLRYFNPIGAHESGNLGEDPKGIPNNLLPYLAQVAVGRRTHLSVFGGDYPTQDGTCL 230 Query: 221 RDWLYV----EDHVRAL-YLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 RD+L+V E H AL +L + G E +N+G +DI+ F + +P Sbjct: 231 RDYLHVMDLAEGHTAALNWLADHPQQRGIEAFNLGTGQGVSVLDII--AAFEQASGVPVP 288 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 Y R G + ++ K + +GW + N+ ++ T W N Sbjct: 289 Y------EIAPRRAGDLAAFWANADKASTVLGWQAKRNLTQMMHDTWRWQSQN 335 >gi|119720075|ref|YP_920570.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] gi|119525195|gb|ABL78567.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] Length = 315 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 29/316 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGFIGS L LV +V+V+D L+ +G+L +L+ + F++ D+ Sbjct: 5 VRVLVTGGAGFIGSHLVERLVAR-GYEVVVLDNLS-SGSLENLRSVLGD--VEFVRGDVR 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 RE + AL+ DA+ +FAA V + E N+ TF +LE R Sbjct: 61 SREDVEKALRGV--DAVFHFAANPEV--RVGDPREHFEHNVFATFNVLEAMR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + S+ VYG +K ED P P S Y A+K + + L+ ++ HT+G Sbjct: 109 -RLGVSDIVFASSSTVYGDAEKLPTPEDYGPLKPISVYGASKLACEALISSYTHTFGFKG 167 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLK 238 + +N GP ++ + ++ E V + GDG + ++++ED V A L + Sbjct: 168 VALRYANVVGP-RATRGVVKDFVRKLRENPRVLEILGDGTQRKSYVWIEDAVEATLLAWE 226 Query: 239 KGRIG-ERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G E YN+G + R+ DIV L + Y T + G + Sbjct: 227 RTGEGFEAYNVGSEDAITVREVADIVVSAMGLSNV----EYRFTGGVMGGRGWVGDVKNM 282 Query: 295 AIDSSKIKSEIGWFPQ 310 +D K+K ++GW P+ Sbjct: 283 HLDIGKLK-KLGWSPR 297 >gi|49480122|ref|YP_034772.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331678|gb|AAT62324.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 321 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 99/344 (28%), Positives = 149/344 (43%), Gaps = 45/344 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL---NSLKEISQSNLFSFLQVD 58 + ++TGGAGFIGS L LV V ++D N +KEI + + Sbjct: 4 KCLITGGAGFIGSHLAEELVGR-GYNVTIVDNFHKGKNKYHDELMKEIR------VIPIS 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 57 VLDKNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AAL 108 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWG 172 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 109 KGKKKVVFA----STSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA 163 Query: 173 HTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D Sbjct: 164 -LEGLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDA 222 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A + + GE NIG NE+ ++ I L D S S + F E P Sbjct: 223 VEATIRAMDEKVNGEIINIGSENEKSIKEVAEVIKKLTD-----SSSKIVQVPFEEVYPH 277 Query: 290 H-----DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E GL +T+ W+ + + Sbjct: 278 GFEEIPNRRP--DVTKLKDLVQFQAKVTWEDGLKETIKWFREED 319 >gi|85704556|ref|ZP_01035658.1| NAD-dependent epimerase/dehydratase [Roseovarius sp. 217] gi|85670964|gb|EAQ25823.1| NAD-dependent epimerase/dehydratase [Roseovarius sp. 217] Length = 373 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 85/342 (24%), Positives = 137/342 (40%), Gaps = 42/342 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 R ++TG G GS L +L+ D +V I + N L I Q + F Sbjct: 3 RALITGVTGQDGSYLAEFLL-DKGYEVHGIKRRASLFNTQRLDHIYQDPHVGNGNFRLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E QPD + N A+SHV S + + +GT LLE R Sbjct: 62 GDLTDSSNLTRILSEVQPDEVYNLGAQSHVAVSFEAPEYTADVDAMGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L ++K RF Q ST E+YG + + E P++P SPY+ K + ++ + + YG Sbjct: 119 -LGLEQKT--RFYQASTSELYGLVQEIPQRETTPFHPRSPYAVAKMYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ ++RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEDCLYMGNIDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKKG------------------------RIGERYNIGGNNERKNIDIVFEIGFLLD 268 +++L++ +G G + + G + Sbjct: 236 QWMMLQQEAPDDFVIATGVQYSVREFIIWSARELGIELEFTGEGVTETATVTAITGAMAP 295 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 A+ P R+ RP D SK K ++GW P+ Sbjct: 296 AIKPGDVIMRIDPRYF--RPAEVETLLGDPSKAKEKLGWVPE 335 >gi|271499816|ref|YP_003332841.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586] gi|270343371|gb|ACZ76136.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586] Length = 335 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M+ +VTG AGFIG C+ L V+ ID L + SLKE + L F F Sbjct: 1 MKFLVTGAAGFIGFFTCQSLCAAGHT-VVGIDNLNSYYEV-SLKEARLAKLRTLAGFRFE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++DI D + + + + + +++ AA++ V S+ + +N+IG +LE R Sbjct: 59 RIDIADSQAMAALFAAEKFERVIHLAAQAGVRYSLENPMVYAESNLIGHLNVLEGCR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + S+ VYG K F + D +P S Y+ATK S++ + ++ H Sbjct: 116 ------HSGVGHLIYASSSSVYGLNSKTPFETTDSTDHPISLYAATKKSNELMAHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + R++ G + +Y G RD+ YV D V + Sbjct: 170 YDLPTTGLRFFTVYGPWGRPDMALFKFTRRILAGEPIDIYNQGDMWRDFTYVTDIVEGVL 229 Query: 235 LVLKKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 V+ + I R YNIG + + +D V + + Sbjct: 230 RVVDQ--IPTRQADWKVESGSPATSSAPYRLYNIGNGSPVRLMDFV--------TALESA 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + F+ + G + D+S + + G+ PQ + G+ V WY D Sbjct: 280 LGREAVKNFMPMQAGDVYQTYADTSDLFAVTGYRPQVGVNEGVRAFVDWYRD 331 >gi|149176469|ref|ZP_01855082.1| UDP-glucose 4-epimerase [Planctomyces maris DSM 8797] gi|148844582|gb|EDL58932.1| UDP-glucose 4-epimerase [Planctomyces maris DSM 8797] Length = 345 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 50/350 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L+ + +V VID L+ G+ ++ SQ+ SF Q+D+ Sbjct: 1 MTILVTGGAGYIGSHCVQQLLAAGQ-KVCVIDNLSR-GHREAVP--SQA---SFFQLDLG 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +K + + +++FAA ++V S+ + N GT LL+ R Q Sbjct: 54 ETDELIDVMKSQRIEKVIHFAALAYVGESVENPLPYYANNTAGTLSLLQAMR-------Q 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY---GI 177 + Q F ST YG ++ +E+ P +PY +K + ++ +Y G Sbjct: 107 SRVSQIVF--SSTCATYGIPEQIPVTEESAQTPINPYGWSKLFIEQILTDCASSYPNFGF 164 Query: 178 PVL----LSNCSNN--YGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 L ++ C+ N G H PE LIP + T + + SHV + G DG +RD+ Sbjct: 165 IGLRYFNVAGCAMNGSLGEDHSPETHLIPNCLNTVLGKQSHVTILGNDYPTADGTCIRDY 224 Query: 224 LYVEDHVRALYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++VED RA L L + YN+G + +D+V + IP Y Sbjct: 225 IHVEDICRAHLLALNALTPQANRFYNVGLGSGFSVLDVVKTTEQVTGREIPVEYQ----- 279 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 RPG + KI E+GW P+ + ++ +++ W W Sbjct: 280 ---ARRPGDPPMLSASHEKITRELGWSPR-------HTSLTEIIESAWNW 319 >gi|218531200|ref|YP_002422016.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|218523503|gb|ACK84088.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] Length = 337 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 42/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK--EISQSNLFSFLQ 56 M +VTG AGFIG AL R L+ V D L+ Y L + +++QS F ++ Sbjct: 1 MHALVTGSAGFIGHALSRRLLAA-GFGVTGFDGLSPYYDVGLKRARHADLAQSPGFEAVE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + +PD + + AA++ V S++ ++ N++G LLE R Sbjct: 60 ARLETPGALLDVMARVKPDLVFHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + K L ST YG F E D +P + Y+A+K +++ + ++ H + Sbjct: 116 --AHPVK---HLLVASTSSAYGGNASVPFRETDRAVSPLTLYAASKLANEAMAHSYAHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L +++ G + ++G+G RD+ +++D + A+ Sbjct: 171 RVPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLIDAIVA 230 Query: 236 VLKK--------GRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G I NIGG + + + IG L AL K+ Sbjct: 231 LSERPPPMPSEGGPISAADTLSTVAPYRLVNIGGG---RPVRLDAMIGALEAALGRKA-- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +++ + PG R ++ +G P+ +E+G+ V WYLD Sbjct: 286 -ERVLKPLP--PGDVIRTHASPDLLRDLVGRLPETPLETGIPAFVRWYLD 332 >gi|28849802|gb|AAN64559.1| UDP-Gal/UDP-GalNac epimerase [Streptococcus gordonii] Length = 339 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 153/335 (45%), Gaps = 48/335 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG+IG+ L+ +++V+D + + +L ++++I ++ + + DI Sbjct: 4 KILVTGGAGYIGTHTVVELIKAGH-ELVVVDNFSNSSKKSLEAVEKIVGQSI-TLYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E + K+F+P +++FA V S + N+ GT LL Sbjct: 62 CDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLR---------V 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYG 176 ++ + + S+ VYG ED P + ++PY TK ++ + + T+ Sbjct: 113 MEEVNCKNIIFSSSATVYGDPLTVPILEDFPVSATNPYGRTKLMAEEIMTDIYKADSTWN 172 Query: 177 IPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG------DGQ 218 I +L ++ S + G P P L+P +A+ R+ V ++G DG Sbjct: 173 IVLLRYFNPIGAHESGDLGENPNGIPNNLLPYVTQVAVGRL---EQVQVFGNDYPTVDGT 229 Query: 219 NVRDWLYVEDHVRALYLVLKK--GRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D + LKK G+ G YN+G ++I+ + + LIP Sbjct: 230 GVRDYIHVVDLAKGHVAALKKFDGKQGLNIYNLGTGKGYSVLEIIHSMEKAVGKLIP--- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + +E RPG + +K K+E+GW Q Sbjct: 287 -----YKIVERRPGDIATSYANPAKAKAELGWEAQ 316 >gi|71279518|ref|YP_267342.1| capsular polysaccharide biosynthesis protein [Colwellia psychrerythraea 34H] gi|71145258|gb|AAZ25731.1| capsular polysaccharide biosynthesis protein [Colwellia psychrerythraea 34H] Length = 334 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 93/363 (25%), Positives = 155/363 (42%), Gaps = 70/363 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG-------NLNSLKEIS--QSNL 51 M+ +VTG AGFIGSA V+++L AG N+N +I+ Q+ L Sbjct: 1 MKYLVTGAAGFIGSA--------------VVERLCAAGHDVVGIDNINDYYDIALKQARL 46 Query: 52 -------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT 104 FSF+++DI DR + Q D +V+ AA++ V SI + +N+IG Sbjct: 47 ARIEHASFSFIKMDIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGH 106 Query: 105 FILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKAS 163 +LE C + K + S+ VYG +K FS +D +P S Y+ATK S Sbjct: 107 LNVLE------GCRNNQVK---HLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKS 157 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDW 223 ++ + ++ H Y IP YG + P+ + +++ G + + +G RD+ Sbjct: 158 NELMAHSYSHLYNIPTTGLRFFTVYGSWGRPDMAPYIFTKKILNGDTIDINNNGDMWRDF 217 Query: 224 LYVEDHVRALYLVLKKGRIGER--------------------YNIGGNNERKNIDIVFEI 263 +V+D V + + I ER YNIG + +D V I Sbjct: 218 THVDDIVEGVIRIAD--VIPERDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAI 275 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L K+ F E +PG + D+ + + P+ +++ G+ + V W Sbjct: 276 EDELGIEAKKN--------FREMQPGDVYQTYADTQDLFKATNYVPKISVKEGVAELVVW 327 Query: 324 YLD 326 + D Sbjct: 328 FKD 330 >gi|312621471|ref|YP_004023084.1| gdp-mannose 4,6-dehydratase [Caldicellulosiruptor kronotskyensis 2002] gi|312201938|gb|ADQ45265.1| GDP-mannose 4,6-dehydratase [Caldicellulosiruptor kronotskyensis 2002] Length = 362 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 R ++TG G G+ L +L+ + +V I + T N + + ++ F Sbjct: 3 RALITGITGQDGAYLAEFLL-EKGYEVHGIKRRTSLINTQRIDHLYEDPHVENRRFYLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDSTNLIRIIQEVQPDEIYNLAAQSHVKVSFESPEYTANADALGTLRLLEAIRIL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +++ RF Q ST E++G + + E P+ P SPY+ K + ++ + + YG Sbjct: 120 ----KLENKTRFYQASTSELFGKVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I A+ R+ G LY G+ RDW Y +D+VRA Sbjct: 176 IFACNGILFNHESPIRGETFVTRKITRAVARIKYGLQDKLYLGNLDAKRDWGYAKDYVRA 235 Query: 233 LYLVL 237 ++++L Sbjct: 236 MWMIL 240 >gi|228990886|ref|ZP_04150850.1| CDP-abequose synthase [Bacillus pseudomycoides DSM 12442] gi|228768823|gb|EEM17422.1| CDP-abequose synthase [Bacillus pseudomycoides DSM 12442] Length = 321 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 151/330 (45%), Gaps = 24/330 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L LK+Q ++ + N L ++ +S +VDI D+ Sbjct: 12 FLITGGYGFIGSHLVRRL---LKLQAKIVILARKSSNPWRLNDVLKS--IKLYEVDIRDK 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +K+ +PD I +FAA V+ + I TN++GT +++ T+ S D Sbjct: 67 IQVENIIKQIRPDYIFHFAAYG-VNSAHTDYMSAIETNVLGTINIIQATK------SIDC 119 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K + + I + YG+ + + EDM P Y ++KA++ + I ++ Sbjct: 120 K---KIINIGSSSEYGNKTESI-KEDMELTPVDIYGSSKAAATIIAHQVAAENNINLITL 175 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I ++++ +V L Q +RD+ YV++ + A L ++ I Sbjct: 176 RPFGVFGEGEEPHKIFCYIILQVLQNRNVNLTLCNQ-LRDYCYVDNIIDACMLTIENNSI 234 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + + L L + + + R R + +KI Sbjct: 235 QNEIFNIGSGETHP---LKYYVELLFKHLQTNKRPNYGALSY---RTNERRISKPNINKI 288 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 K + W P+ ++E G+ KTV WY N + Sbjct: 289 KRMLSWEPRISIEEGIIKTVNWYKHNTHLY 318 >gi|282881576|ref|ZP_06290245.1| GDP-mannose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] gi|281304562|gb|EFA96653.1| GDP-mannose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] Length = 352 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 94/363 (25%), Positives = 154/363 (42%), Gaps = 66/363 (18%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTY-AGNLNSL------KEISQSNLFSFL 55 ++TG G GS L +L++ + L+ ++ G + L +++ QS L + Sbjct: 8 LITGITGQDGSYLAEFLIDKGYDVHGLLRRSSSFNTGRIEHLYLDEWVRDMKQSRLVNLH 67 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR--- 112 D+ D + + E +P I N AA+SHV S + T+ IG LLE R Sbjct: 68 WADMTDSSSLIRIIGEIKPTEIYNLAAQSHVKVSFDVPEYTADTDAIGVLRLLEAVRICG 127 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L SC R Q ST E++G + + E P+ P SPY+ K +++ + Sbjct: 128 LEKSC---------RIYQASTSELFGKVQEVPQKETTPFYPRSPYAVAKLYGFWIMKNYR 178 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVE 227 +YG+ +L ++ S G +F + I LA R+ G LY G+ RDW Y Sbjct: 179 ESYGMYCCNGILFNHESERRGE-NFVTRKITLAAARIAHGLQDKLYLGNLDARRDWGYAP 237 Query: 228 DHVRALYLVLKKGR-------IGERYNI-------------------GGNNERKNIDIVF 261 D+V+ ++L+L++ + GE Y++ G NE K ID Sbjct: 238 DYVQCMWLMLQQEQPDDFVIATGEYYSVRDFATLAFHHAGIELEWKDKGMNE-KGIDKA- 295 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G +L + PK + RP + D +K K ++GW P++ L K + Sbjct: 296 -TGKVLVEVDPKYF-----------RPADVEQLLGDPTKAKEQLGWNPRQTSFEELVKKM 343 Query: 322 CWY 324 Y Sbjct: 344 TEY 346 >gi|270294013|ref|ZP_06200215.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D20] gi|317478764|ref|ZP_07937917.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] gi|270275480|gb|EFA21340.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D20] gi|316905099|gb|EFV26900.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] Length = 358 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + ++ QPD I N AA+SHV S + T+ + Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVSFDVPEYTAETDAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + SE P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--RIYQASTSELFGKVQEVPQSETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y +D++ ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYIECMWLILQHDTPEDFVIATGEMHTVREFATLAFREVGITLCWEGQGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID + G +L + PK + RP + D +K K+ +GW P++ Sbjct: 285 DEKGIDT--QTGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRQT 331 >gi|319785115|ref|YP_004144591.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171003|gb|ADV14541.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 368 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 93/377 (24%), Positives = 158/377 (41%), Gaps = 72/377 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GFIG + + LV V ++D L ++S + ++ ++ D+ D Sbjct: 3 RILVTGGCGFIGRHVAQELVEQ-DYSVRILDALLE--QVHSGEAVALPAGTELIKGDVRD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RE + SAL+ DA+++ AAE V +S+ +++ N +GT LLE + Sbjct: 60 REAVASALEGV--DAVIHLAAEVGVGQSMYEIARYVSANDLGTATLLE---------ALI 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFS----------------------------------- 146 K R + S+ VYG +GL++ Sbjct: 109 KHPVERIVVASSMSVYG---EGLYATPDGRRIDNARRKASDIKSGQWNPLSPEGAPLSPL 165 Query: 147 ---EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYG-------PYHFPEK 196 E+ P + +S Y+ TK + + VL +G YGI + N +G PY Sbjct: 166 PTDEEKPVDLASIYALTKYAQERAVLIFGEAYGIDAVALRLFNVFGAGQALSNPY---TG 222 Query: 197 LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI-GERYNIGGNNERK 255 ++ +R+ G ++ DG+ RD+++V D RA L L++ + G NIG Sbjct: 223 VLANFASRLANGQRPMIFEDGEQKRDFVHVHDVARAFRLALQQRQAKGHVINIGSGRAYA 282 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 + E+ LL + EL+ + R G R D SK + +G+ P +E+ Sbjct: 283 ----ISEVARLLAEAMGTPNRSPELLG--KARSGDIRNCFADISKARELLGFEPVRQLEN 336 Query: 316 GLNKTVCWYLDNNWWWR 332 L V W + + R Sbjct: 337 SLGDFVSWVRNTSAVDR 353 >gi|331002045|ref|ZP_08325565.1| UDP-glucose 4-epimerase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411841|gb|EGG91246.1| UDP-glucose 4-epimerase [Lachnospiraceae oral taxon 107 str. F0167] Length = 355 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 156/350 (44%), Gaps = 48/350 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M +VTGGAG+IGS C L+ D +V+V+D L + +L ++EI+ +L F +VD Sbjct: 1 MANLVTGGAGYIGSHTCVELL-DAGYEVVVVDNLVNSSRESLKRVEEITGKSL-RFYEVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +++ + KE DA+++FA V S+ E+ NI GT IL E R + Sbjct: 59 LLNQKALTKVFKENDIDAVIHFAGLKAVGESVYKPLEYYHNNITGTLILCEVMREFGV-- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGHTYG- 176 D+ F +T VYG +ED P ++PY TK + +L HT Sbjct: 117 -----DKIVFSSSAT--VYGDPKIVPITEDAPLGVITNPYGRTKGMLEQ-ILTDCHTAND 168 Query: 177 -IPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGSHVFL--YG------DG 217 V+L N G P P L+P IT++ G V L +G DG Sbjct: 169 KFSVMLLRYFNPIGAHESGRIGENPKGIPNNLLPY-ITQVAVGKLVCLGVFGNDYNTKDG 227 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV+AL ++K + YN+G +D++ + D I Sbjct: 228 TCVRDYIHVVDLAKGHVKALEKIIKDPGKVDIYNLGTGIGYSVLDVINAFEKVNDIKI-- 285 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +Y F + R G D S E+GW ++N+E + W Sbjct: 286 NYV------FKDRRAGDVPACYADPSLAFKELGWKAEKNIEDMCRDSFRW 329 >gi|320106376|ref|YP_004181966.1| UDP-glucose 4-epimerase [Terriglobus saanensis SP1PR4] gi|319924897|gb|ADV81972.1| UDP-glucose 4-epimerase [Terriglobus saanensis SP1PR4] Length = 326 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 92/329 (27%), Positives = 140/329 (42%), Gaps = 46/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTGGAG+IG + R L+ +T NL K + + +F++ DI Sbjct: 1 MNLLVTGGAGYIGGTVSRILLA-------AGHTVTIYDNLCHSKREAVAPGATFIEADIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I L+E + D +++FAA S+ + + N T LLE + Sbjct: 54 DRPRIEQTLREGKFDGVMHFAALIEAGESMQKPEIYFRNNTASTLTLLE-------AMLA 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIPV 179 ++ F ST YG +K ED P++ Y +K ++ +L W H +G Sbjct: 107 TGNNKLVF--SSTAACYGEPEKTPILEDATLKPTNAYGESKLLVEH-ILGWFHRVHGFRY 163 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLY 225 ++ YG H PE LIPL + + + +YG DG VRD+++ Sbjct: 164 ASLRYFNVAGAIEGYGEAHEPESHLIPLILDVALGRRESIKIYGSDYPTPDGTCVRDYIH 223 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V D A L L+ R YNIG F + ++D++ S + I Sbjct: 224 VSDLADAHLLALQSLEKQTRAIYNIGSGGG-------FTVRQVIDSV---SRVTGKQIPV 273 Query: 284 IED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 IE+ R G S KIKSE+GW P+ Sbjct: 274 IEEPRRDGDPAVLVASSEKIKSELGWAPR 302 >gi|212703877|ref|ZP_03312005.1| hypothetical protein DESPIG_01929 [Desulfovibrio piger ATCC 29098] gi|212672694|gb|EEB33177.1| hypothetical protein DESPIG_01929 [Desulfovibrio piger ATCC 29098] Length = 384 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG LC L+ V+ +D L Y L + L + F F+ Sbjct: 50 MHILVTGAAGFIGYHLCDRLLAQGHT-VVGLDNLNDYYDVQLKKDRLARLEGRPGFRFVL 108 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ +RE + + + ++N AA++ V S++ ++ +N++G LLE R Sbjct: 109 QDMAEREAMSALFAAEKFTHVINMAAQAGVRYSLINPMAYVDSNLVGFANLLEGCR---- 164 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + F F S+ VYG FSE + P S Y+ATK S++ + ++ H Y Sbjct: 165 ---HNGVQHFVF--ASSSSVYGLNTSQPFSEHNNVDHPVSLYAATKKSNELMAHSYSHLY 219 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L +++ + ++ G+ RD+ Y++D V + Sbjct: 220 GLPCTGLRFFTVYGPWGRPDMALQLFAHAIMKDEPIKVFNGGRMRRDFTYIDDIVEGVVR 279 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +L + YNIG N + +++ I L DAL K+ Sbjct: 280 LLPLAPKPDPQWDAATPDPATSSAPWRIYNIGNN---QTVELNDFIAALEDALGKKA--- 333 Query: 278 TELIR-FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 IR + +PG + + G+ P +++G+ + V W+ Sbjct: 334 ---IRDLLPMQPGDVEATWANIDALSQVTGFAPVTPLKTGIERFVAWF 378 >gi|18265740|gb|AAL67291.1|AF389474_4 UDP-glucose 4-epimerase [Streptococcus salivarius] Length = 333 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDTLIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|134301648|ref|YP_001121616.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931750|ref|YP_001891735.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. mediasiatica FSC147] gi|134049425|gb|ABO46496.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. tularensis WY96-3418] gi|187712659|gb|ACD30956.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. mediasiatica FSC147] Length = 339 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKVSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + +E A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LGKAKLTKVFQEHDIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K + F+ S+ VYG +K F+EDMP + ++PY ATK + ++ Sbjct: 114 QEYK-VYNFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATKLMLEDILRD--------- 163 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 164 -LQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + + W Sbjct: 283 GKEIP--------YQIVARRAGDIAASFADVAKAKRELGFETQKTIDDICDDMLKW 330 >gi|294775723|ref|ZP_06741227.1| NAD-binding protein [Bacteroides vulgatus PC510] gi|294450446|gb|EFG18942.1| NAD-binding protein [Bacteroides vulgatus PC510] Length = 345 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 49/355 (13%) Query: 1 MRLIVTGGAGFIGSAL-----CRY-------LVNDLKIQVLVIDKLTYAGNLNSLKEIS- 47 M+++VTG AGFIGS L CR +ND L +L G S + Sbjct: 1 MKILVTGAAGFIGSKLSYALACRGDEVVGLDCINDYYDVRLKYGRLQECGLPVSEADCDY 60 Query: 48 ----QSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 QS LF F+++ I D++ + ++ + D ++N AA++ V SI ++ +N Sbjct: 61 GATFQSTLFPNYKFIRLGIEDKQELFRLFEQEKFDKVMNLAAQAGVRYSISNPYAYMESN 120 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSA 159 + G +LE R + + S+ VYG K FSED + P S Y+A Sbjct: 121 LHGFLNILEACRYYGVK---------HLIFASSSSVYGMNTKVPFSEDDKVDTPVSLYAA 171 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQ 218 +K S++ + A+ YG V YGP+ P+ + P+ + I G + ++ +G Sbjct: 172 SKKSNELMAHAYSKLYGFAVSGLRYFTVYGPWGRPD-MAPMLFAKAISAGEPIKVFNNGL 230 Query: 219 NVRDWLYVEDHVRALYLVLKK---------GRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 RD+ Y++D V V+ G + YNIG + + +D + E+ L Sbjct: 231 LSRDFTYIDDIVEGTVRVIDHLPASEDVLDGVAYKIYNIGCGHPMQLMDFIHELEQALGR 290 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K Y + + G + D+S+++ E+G+ P+ ++ G+ + + WY Sbjct: 291 ESRKVY--------LPMQQGDVYQTYADTSRLEQEVGYKPRVSLHEGIGQFIEWY 337 >gi|164688703|ref|ZP_02212731.1| hypothetical protein CLOBAR_02350 [Clostridium bartlettii DSM 16795] gi|164602179|gb|EDQ95644.1| hypothetical protein CLOBAR_02350 [Clostridium bartlettii DSM 16795] Length = 346 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 87/340 (25%), Positives = 158/340 (46%), Gaps = 48/340 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL--NSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+N +V+++D L + + + ++EI+ + F ++D Sbjct: 1 MNILVTGGAGYIGSHTSIELIN-AGYEVIIVDNLCNSNFIVVDRIQEITGKKV-KFYKID 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ++E ++ E + DA+++FAA V S+ E+ + N+I T + E + + Sbjct: 59 ATNKEELKKVFVENKIDAVIHFAALKAVGESVEKPLEYYSNNLINTINVWELMKEF---- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 + ++F+ S+ VYGS ED P + ++PY +TK + + + + Sbjct: 115 -----NVYKFVFSSSATVYGSPKTCPIKEDFPLSTTNPYGSTKLMIENMLRDICKADKDF 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 + +L ++ S G P P L+P IT++ G + ++G DG Sbjct: 170 NVAILRYFNPIGAHESGKIGEEPNGIPNNLMPY-ITKVAVGKLKELSVFGNDYDTHDGTG 228 Query: 220 VRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV+AL L K G + YN+G +D+V IP Sbjct: 229 VRDYIHVVDLAIGHVKALEKLNQKPGLV--TYNLGTGTGYSVLDLVKSFEKASGVKIP-- 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + ++ R G D SK K E+GW + +++ Sbjct: 285 ------YKIVDRRAGDIAMCYADPSKAKEELGWVAKYDID 318 >gi|46581757|ref|YP_012565.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46451180|gb|AAS97825.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235384|gb|ADP88238.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1] Length = 335 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 43/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L R L+ + V+ +D L Y+ L + L + FSF + Sbjct: 1 MHVLVTGAAGFIGFHLSRRLLAEGH-TVVGLDNLNDYYSIQLKRDRLALLEDHRGFSFAE 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ + + + +VN AA++ V SI ++ +N++G +LE R Sbjct: 60 IDMAHDDDMDQLFEREGFTHVVNLAAQAGVRYSIKNPRSYVQSNLVGFGNILEGCR---- 115 Query: 117 CLSQDKKDQFRFL-QISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 +Q + L S+ VYG FS D +P S Y+A+K +++ + + H Sbjct: 116 ------HNQVKHLVYASSSSVYGLNTTMPFSVHDNVDHPISLYAASKKANELMAHTYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 Y +P YGP+ P+ + L ++EG + ++ GQ RD+ Y++D V + Sbjct: 170 YRLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGQMRRDFTYIDDIVEGVL 229 Query: 235 LVLK---------KGRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 V+K G + YNIG NN E+G ++ L + Sbjct: 230 RVMKLNPTPNPAWTGSAPDPSTSTAPYRIYNIGNNN-------TVELGRFIEVL-EECLG 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + +PG D + ++ G+ P +E G+ V WY Sbjct: 282 KKAVKNMLPMQPGDVAATYADVDDLIADTGFRPATTVEEGVAAFVAWY 329 >gi|16804515|ref|NP_466000.1| UDP-glucose 4-epimerase [Listeria monocytogenes EGD-e] gi|224503282|ref|ZP_03671589.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-561] gi|255026152|ref|ZP_05298138.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-003] gi|16411965|emb|CAD00555.1| UDP-glucose 4-epimerase [Listeria monocytogenes EGD-e] Length = 327 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELIT-RGYEVVVIDNLR-TGHRESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D + S+ YG ++ +EDMP NP S Y TK + ++ YG+ Sbjct: 105 EEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H+RAL LK G +N+G +N F + +L+A ++ + E+ Sbjct: 225 QVEDLIDAHIRALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTGKEI 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 + R D I SS EI GW P Sbjct: 275 PAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|303237354|ref|ZP_07323924.1| GDP-mannose 4,6-dehydratase [Prevotella disiens FB035-09AN] gi|302482741|gb|EFL45766.1| GDP-mannose 4,6-dehydratase [Prevotella disiens FB035-09AN] Length = 361 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 148/337 (43%), Gaps = 38/337 (11%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTY-AGNLNSL------KEISQSNLFSFL 55 ++TG G GS L +L+ ++ L+ ++ G + L +++ + L + Sbjct: 7 LITGITGQDGSYLAEFLIEKGYEVHGLLRRSSSFNTGRIEHLYLDEWVRDMKKERLVNLH 66 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR--- 112 D+ D + + E +P I N AA+SHV S + T+ +G LLE R Sbjct: 67 WADMTDSSSLIRIIGEVKPTEIYNLAAQSHVKVSFDVPEYTADTDAVGVLRLLEAVRICG 126 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L SC + Q ST E++G + + E P+ P SPYS K +++ + Sbjct: 127 LEKSC---------KIYQASTSELFGKVQEVPQKETTPFYPRSPYSVAKLYGFWIMKNYR 177 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVE 227 +YG+ +L ++ S G +F + I LA R+ +G LY G+ RDW Y + Sbjct: 178 ESYGMYCCNGILFNHESERRGE-NFVTRKITLAACRIAQGLQDKLYLGNLGAQRDWGYAK 236 Query: 228 DHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 D+V ++L+L++ GE Y + ++ E+ + + + K Y+ Sbjct: 237 DYVECMWLILQQEEPDDFVIATGEMYTVRAFCTAAFKEVGIELEWRGEGIDEKGYNKDTG 296 Query: 281 IRFIED-----RPGHDRRYAIDSSKIKSEIGWFPQEN 312 +E RP + D +K K+++GW P++ Sbjct: 297 AVLVEVDPKFFRPAEVEQLLGDPTKAKTKLGWNPRKT 333 >gi|284051065|ref|ZP_06381275.1| dTDP-glucose 4,6-dehydratase [Arthrospira platensis str. Paraca] gi|291571141|dbj|BAI93413.1| putative UDP-glucuronic acid decarboxylase [Arthrospira platensis NIES-39] Length = 312 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K VL +D + GN +++ + + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLM-EQKHDVLCLDNF-FTGNKDNILKWIGNPYFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D I + A + + I TN++GT + L Sbjct: 59 --EPIR-----LEVDQIYHLACPASPVHYQYNPVKTIKTNVMGTL----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHTY 175 K+ + RFL ST EVYG D +E+ N P S Y K ++ L + H Sbjct: 102 AKRVKARFLLASTSEVYGDPDVHPQTEEYRGNVNCIGPRSCYDEGKRVAETLAFDYYHQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + ++ N +GP +++ I + I G + +YGDG R + YV D V L Sbjct: 162 NVDIRVARIFNTFGPRMLENDGRVVSNFIVQAIRGIPLTVYGDGSQTRSFCYVSDLVEGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ IG N+G E +++ +I +++ Y +D P ++ Sbjct: 222 IRLMNGDYIGP-VNLGNPGEYTILELATKIQQMINPDAEIQYKP-----LPQDDP---KQ 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K K + W P ++ GL T+ Sbjct: 273 RQPDITKAKKYLDWEPTVHLNDGLKLTI 300 >gi|157953346|ref|YP_001498237.1| hypothetical protein AR158_C155R [Paramecium bursaria Chlorella virus AR158] gi|156067994|gb|ABU43701.1| hypothetical protein AR158_C155R [Paramecium bursaria Chlorella virus AR158] Length = 343 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 41/339 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG G GS LC +LVN V + + + N E + + + D+ D Sbjct: 6 VLVTGATGQDGSYLCPFLVNK---GYTVYGLVRHTSSENPRVEELKKQGINIVHGDLTDS 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + +PD I N AA+S V S A+ + +G LL+ R+ Sbjct: 63 SSLIHIITKIRPDEIYNLAAQSFVHDSFNQAEVTANVDALGVLRLLDAVRI--------S 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R Q S+ E+YG + + +E+ P+ P SPY K + ++ + +Y + V S Sbjct: 115 GVNSRICQASSSELYGKVQEIPQTENTPFYPRSPYGVAKLYAYWICKNYRESYNMYVCNS 174 Query: 183 NCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 C N+ P + F + I + + G +Y G+ RDW Y +D+V A++L+L+ Sbjct: 175 ICFNHESPNRGHQFVTRKITKVVANIFNGVEKCMYLGNIDAKRDWGYAKDYVEAMWLMLQ 234 Query: 239 KGRIGERYNIGGNNE--RKNIDIVFEIGFLLDALIPKSYSHTE----------------- 279 + + G R+ + + F + LD ++ S H Sbjct: 235 QDTPDDYVIATGKTTSVREFVKMAFGV---LDIVVEFSGEHENEVATVVSAPENSHVKVG 291 Query: 280 --LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENME 314 ++R +D RP D+SK + +GW P+ ++E Sbjct: 292 DVVMRINKDFYRPAEVDLLVGDASKAQKILGWKPKTSLE 330 >gi|320041954|ref|YP_004169329.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319752560|gb|ADV64319.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 393 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 44/350 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI--QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TG AGFIG C +V+ +D L+ G + + + + F+++D+ Sbjct: 34 KILITGAAGFIG---CHAAARFAAAGWRVVALDNLSRPGGALNWEWLKTQGVTDFVRLDV 90 Query: 60 CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + + DA+++ A + V +S+ N +GT +LE RL Sbjct: 91 RDAQGLLDVVSRHSDLDAVLHLAGQVAVTQSVRDPRADFEHNALGTLNVLEAVRL----- 145 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS------------------EDMPYNPSSPYSAT 160 + L ST+++YG+L++ + E P SPY + Sbjct: 146 --GAGGRPAVLYASTNKIYGALEEVAVARSPDGKRYRAVDRPQGIDESQPLRFHSPYGCS 203 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K + D V + YG+ + S YG + + + G + +YGDG Sbjct: 204 KGAGDQYVRDYAKIYGMNTVSMVQSCIYGTRQMGVEDQGWVAHFVIAAQLGRPLTIYGDG 263 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD L+V+D + RA+ +G G+ +NIGG ER + E+ L+A + + Sbjct: 264 LQVRDLLWVDDLVDCYARAVDRAGWEGVRGQGFNIGGGPERSLS--LLELVERLEARLGR 321 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + +RF RPG + + D+ + + W P ++E GL + W Sbjct: 322 RLA----LRFEPWRPGDQKVFIADTQAARRYLEWQPNVSVEEGLERLWSW 367 >gi|254522956|ref|ZP_05135011.1| nucleotide sugar epimerase [Stenotrophomonas sp. SKA14] gi|219720547|gb|EED39072.1| nucleotide sugar epimerase [Stenotrophomonas sp. SKA14] Length = 321 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 147/331 (44%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M L++TG AGFIG+ R L+ + V+ +D Y + + + +D Sbjct: 1 MTLLLTGAAGFIGAYTARALL-EAGQPVVGLDNFNDYYDPQIKRDRVAALCPTLDLRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E QP A+++ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDRDGLAALFDEVQPTAVIHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ +G+ RD+ +V D V + Sbjct: 171 HATGLRFFTVYGPWGRPD-MAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229 Query: 237 LKK---GRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L G + R +N+G + +++ IG +I ++ + +PG Sbjct: 230 LAHPADGPVPHRVFNLGNHTP---VELERFIG-----VIEQAAGRPAQKVYKPMQPGDMV 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R D+ + G+ +E GL V W Sbjct: 282 RTMADTRRAHDAFGFDAVTPIEVGLPPVVQW 312 >gi|254423437|ref|ZP_05037155.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] gi|196190926|gb|EDX85890.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] Length = 339 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 47/348 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG G+IGS + L +V+++D L Y G+ + +K + ++ L ++ DI DR Sbjct: 12 VLVTGGGGYIGSHTVKAL-QAAGYEVVILDNLIY-GHRDLVKNVLKTKL---IEGDIGDR 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+V+FAA ++V S ++ N+ T LLE + + Sbjct: 67 ALLEQLFSTYSVAAVVHFAAYAYVGESATNPAKYYANNVCATLTLLE-------AMVEAG 119 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 D+ F ST +YG D E P +PY TK + ++ + YG+ + Sbjct: 120 IDKLVF--SSTCAIYGVPDTLPILETHDKRPVNPYGKTKLMVEQILDDFDRAYGLKSVCF 177 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 ++ S + G H PE LIPL + + V ++G DG +RD+++V Sbjct: 178 RYFNAAGADPSGDLGEDHMPETHLIPLVLAAAQKRDSVSIFGKDYPTADGTCIRDYIHVS 237 Query: 228 DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIRFIED 286 D A L G + + GN+ +K I++ GF + +I + + T I +E+ Sbjct: 238 DLADAHVL-------GLDHLLQGNSSQK-INLSNGSGFSVRQVIETAKAVTGRPIEVVEE 289 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RPG +S K + +GW P+ + +D+ W W Sbjct: 290 ARRPGDPPALVGNSDKAATLLGWQPR-------YPELVDIIDHAWQWH 330 >gi|33592714|ref|NP_880358.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis Tohama I] gi|33594070|ref|NP_881714.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella pertussis Tohama I] gi|33564144|emb|CAE43416.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella pertussis Tohama I] gi|33572360|emb|CAE41917.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis Tohama I] gi|332382129|gb|AEE66976.1| capsular polysaccharide biosynthesis protein [Bordetella pertussis CS] gi|332383487|gb|AEE68334.1| UDP-N-acetylglucosamine C4 epimerase [Bordetella pertussis CS] Length = 341 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 32/335 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG AGFIGS L L+ L V+ +D G+ ++L E+ Q F+F++ Sbjct: 20 LVTGCAGFIGSNLLETLLG-LDQAVVGLDNFA-TGHQHNLDEVRAAVTPEQWARFTFIEG 77 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWW 115 DI D + A++ D +++ AA V RS+ + ITTN IG F+ + Sbjct: 78 DIRDLAACQRAVQGV--DRVLHQAALGSVPRSL---KDPITTNEVNIGGFLNM------- 125 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++D + Q F+ ++ YG E+ NP SPY+ TK ++ + +Y Sbjct: 126 LVAARDAQVQ-AFVYAASSSTYGDHPDLPKVEERIGNPLSPYAVTKYVNELYADVFARSY 184 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P+ +IP MI+G V + GDGQ RD+ +VE+ V+ Sbjct: 185 GFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVENAVQ 244 Query: 232 ALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A L G + YN+ N R + +FE L L + S+ + + E R G Sbjct: 245 ANLLAAMAAPEGANQVYNV-AYNARTTLTELFE--HLRRTLAGQGVSYEKAPVYAEFRAG 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D K +G+ P ++ GL + WY Sbjct: 302 DVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWY 336 >gi|89256723|ref|YP_514085.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica LVS] gi|115315131|ref|YP_763854.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica OSU18] gi|156502884|ref|YP_001428949.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010917|ref|ZP_02275848.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC200] gi|254368028|ref|ZP_04984048.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica 257] gi|254369582|ref|ZP_04985593.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC022] gi|290954154|ref|ZP_06558775.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica URFT1] gi|295312472|ref|ZP_06803244.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica URFT1] gi|23506371|gb|AAN37763.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506373|gb|AAN37764.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506375|gb|AAN37765.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506377|gb|AAN37766.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506379|gb|AAN37767.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506381|gb|AAN37768.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506383|gb|AAN37769.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506385|gb|AAN37770.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|23506387|gb|AAN37771.1| galactose epimerase [Francisella tularensis subsp. holarctica] gi|89144554|emb|CAJ79869.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica LVS] gi|115130030|gb|ABI83217.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica OSU18] gi|134253838|gb|EBA52932.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica 257] gi|156253487|gb|ABU61993.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122536|gb|EDO66671.1| UDP-glucose 4-epimerase [Francisella tularensis subsp. holarctica FSC022] Length = 339 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 63/356 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 +++VTGG G+IGS L+ D QV+V+D L+ + ++ +K+I+ + F F Q+D+ Sbjct: 4 KILVTGGVGYIGSHTVVELL-DRDYQVVVVDNLSNSKVSVIDRVKKITNKD-FDFYQLDL 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + + +E A+++FA V S+ E+ NI GT LLE L Sbjct: 62 LGKAKLTKVFQEHDIYAVIHFAGFKAVGESVEKPLEYYHNNIQGTLNLLE--------LM 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q+ K + F+ S+ VYG +K F+EDMP + ++PY ATK + ++ Sbjct: 114 QEYK-VYNFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGATKLMLEDILRD--------- 163 Query: 180 LLSNCSNNYG---------------------PYHFPEKLIP-LAITRMIEGSHVFLYG-- 215 L N +NN+ P P L+P +A + + + ++G Sbjct: 164 -LQNANNNFNITCLRYFNPVGAHSSGMIGEDPQGIPNNLMPYVAQVGAGKLAKLSIFGGD 222 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D H+ AL + + YN+G N ++IV L Sbjct: 223 YETIDGTGVRDYIHVVDLAIGHILALEKLSQDKPSWRAYNLGSGNGYSVLEIVKAYQKAL 282 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 IP + + R G D +K K E+G+ Q+ ++ + + W Sbjct: 283 GKEIP--------YQIVARRTGDIAASFADVAKAKRELGFETQKTIDDICDDMLKW 330 >gi|327479355|gb|AEA82665.1| epimerase [Pseudomonas stutzeri DSM 4166] Length = 309 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 28/282 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ V V+D L+ N + Q + D+ D Sbjct: 6 ILITGGAGFIGSNLVDALLAR-GYAVRVLDNLSTGKREN----LPQDERVELIVGDVADA 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSCLS 119 EC+R +++ + A+V+ AA + V S+ LG + +N+IGT L E R Sbjct: 61 ECVRRSVQGCR--AVVHLAAVASVQASVDDPLGTHQ---SNLIGTLNLCEAMR------- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R L S+ VYG+ +G E P +PY+A K +S++ + + +G+ Sbjct: 109 --EAGVQRVLFASSAAVYGNNGEGQAIDEGTAKAPLTPYAADKLASEHYLDFYRRQHGLE 166 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 ++ N YGP P +I + R +G + ++GDG+ RD++YV D V L Sbjct: 167 PVVFRFFNVYGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFIYVGDLVEVLV 226 Query: 235 LVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 L+ E N+G N ++ IG +L L SY Sbjct: 227 QALEAPDAPEGAVNVGLNKATSLNQLLDAIGDVLGDLPEVSY 268 >gi|332526312|ref|ZP_08402440.1| NAD-dependent epimerase/dehydratase [Rubrivivax benzoatilyticus JA2] gi|332110450|gb|EGJ10773.1| NAD-dependent epimerase/dehydratase [Rubrivivax benzoatilyticus JA2] Length = 335 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 33/343 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M++++TG AGFIG L+ +V+ +D L L+ L + F F++ Sbjct: 1 MKILLTGAAGFIGMTTALRLLARGD-EVVGLDNLNDYYDVRLKLDRLARLEPHPGFRFVK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR + + + D +++ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LDVADRAGMDALFAAERFDRVIHLAAQAGVRYSLQNPHAYVDSNLVGFINILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + Q + S+ VYG K F+E D +P S Y+ATK +++ + + H Y Sbjct: 116 ----HARVQ-HLVYASSSSVYGGNTKMPFAEHDSVDHPVSLYAATKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + L ++EG + ++ G+ RD+ YV+D V + Sbjct: 171 GLPTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNHGRMKRDFTYVDDIVEGVIR 230 Query: 236 VLKK------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR-- 287 VL + E + G +N VF IG + + H E E + Sbjct: 231 VLDRTAEPDPAYRPEAPDAGTSNVPYR---VFNIGNHAPVELMEFIGHVEAALGREAQKN 287 Query: 288 --PGHD----RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P D YA D + + G+ P ++ +G+ + V WY Sbjct: 288 LLPMQDGDVPATYA-DVDALSAWTGFAPATDLRTGIGRFVDWY 329 >gi|225435012|ref|XP_002284153.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147843232|emb|CAN80550.1| hypothetical protein VITISV_019391 [Vitis vinifera] gi|297746110|emb|CBI16166.3| unnamed protein product [Vitis vinifera] Length = 346 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 34/324 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 92 EPLLI-------EVDKIYHLACPASPIFYKHNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG + +E P S Y K ++ L+ + + Sbjct: 135 AKRVGARILLTSTSEVYGDPLEHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + ++ N YGP + +++ I + + G + + G R + YV D V L Sbjct: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQAPGTQTRSFCYVSDMVDGL 254 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ G NIG E +++ + L++ + +I+ +++ P R+ Sbjct: 255 IRLMEGENTGP-INIGNPGEFTMLELAETVKELINPEV--------VIKMVDNTPDDPRQ 305 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D SK K +GW P+ + GL Sbjct: 306 RKPDISKAKELLGWEPKIKLRDGL 329 >gi|298708329|emb|CBJ48392.1| conserved unknown protein [Ectocarpus siliculosus] Length = 487 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 141/331 (42%), Gaps = 35/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGF+GS L L+ + V+V+D + G +++ F + D+ Sbjct: 150 MRVLVTGGAGFVGSHLVDALMK-MGHDVIVLDNF-FTGRQKNVQHWIGHPSFHLITHDVV 207 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E I+ + D I + A + + I T+ GT + L Sbjct: 208 --EPIK-----LEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTL----------NMLGL 250 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG ++ E P P + Y K ++ ++ A+ + Sbjct: 251 AKRTGARMLLTSTSEVYGDPEEHPQRETYWGNVNPIGPRACYDEGKRVAETMMYAYENQG 310 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V ++ N +GP P +++ I + I+G + +YGDG R + YV+D VR L Sbjct: 311 EMEVRVARIFNTFGPRMHPNDGRVVSNFIIQAIQGKDITIYGDGSQTRSFQYVDDLVRGL 370 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G NIG +E D LI S T I F++ + Sbjct: 371 IALMNNNYSGP-VNIGNPDEYTVKDFA--------ELIKSSTESTSKIIFMDGTKDDPNK 421 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K E+GW P ++ GL +T+ ++ Sbjct: 422 RKPDITLAKKELGWEPTVAVKDGLVETIKYF 452 >gi|171184965|ref|YP_001793884.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934177|gb|ACB39438.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] Length = 411 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 121/276 (43%), Gaps = 35/276 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL-NSLKEISQSNLFSFLQVDIC 60 R+++TG GF GS L + L+ D +V + K G L +L + + ++ D+ Sbjct: 7 RVLITGVGGFAGSYLAKALI-DAGAEVYGLVKRRADGTLPKNLVDRGVAGGVKLIEGDLR 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ QPD I + AA+S V RS E + N IGT LLE R+ + Sbjct: 66 DITSLAMAIDRAQPDVIFHLAAQSFVPRSFTHPLETLEINTIGTANLLEAVRM------R 119 Query: 121 DKKDQFRFLQISTDEV----------------YGS-------LDKGLFSEDMPYNPSSPY 157 DK + S++E YG+ + + +E P P SPY Sbjct: 120 DKTNPVIVFAGSSEEYGLVISSERQYKRALEKYGAVYPPPAKIPELPIAETNPLRPMSPY 179 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFL 213 +A+K DYL+ + YG+ ++S N+ G F + + ++ G + Sbjct: 180 AASKVHGDYLMRTYHAVYGLRTIVSRAFNHEGAGRGIMFVTAQVACQVMKLKMGETDRIK 239 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 G+ RDW +VED V L+ ++G GE YN G Sbjct: 240 IGNVNAFRDWSHVEDIVAGYMLLAERGTPGEVYNQG 275 >gi|114777832|ref|ZP_01452763.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans PV-1] gi|114551823|gb|EAU54363.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans PV-1] Length = 303 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 144/347 (41%), Gaps = 72/347 (20%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GG+GFIGS V+D L AG+ +V + Sbjct: 1 MNVLVLGGSGFIGSH--------------VVDHLLAAGH----------------KVRVF 30 Query: 61 DR--ECIRSALKEFQ------------PDAIVNFAAESH-VDRSILGADEF-----ITTN 100 DR E R+ALK+ + +A+ A H + ++ G + +N Sbjct: 31 DRAPERYRTALKQVEYRLGAFDDTFQVAEALQGMDAVCHLISTTVPGTSNLDPVADVQSN 90 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSA 159 +I T LLE+ R KD R L +S+ VYG+ + SE P NP S Y Sbjct: 91 LINTLSLLEQMR---------NKDLHRILYLSSGGTVYGNPQQFPISESHPLNPISSYGV 141 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGD 216 K + + + + YG ++ SN YG + + LI + R + G + ++GD Sbjct: 142 VKVAIEKYMNMYQQLYGFEPIILRPSNPYGSRQGHAGVQGLIGTLLARALSGDTLEIWGD 201 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G +RD+++V D R L+ G G +N G DI IG + D + S Sbjct: 202 GSVIRDYMHVSDLARLSVAALESGHSG-VFNAGSGEGHSINDI---IGLIRDIM-----S 252 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + E R + +D S+ K W P+ ++ +G+N+ + W Sbjct: 253 EELQVNYCEGRTFDVKEVVLDISRAKETFAWQPEISLSAGINEQLQW 299 >gi|82408011|pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 136/330 (41%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L D +V V+D N I N F + D+ + Sbjct: 29 RILITGGAGFVGSHLTDKLXXDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 86 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + TN IGT + L Sbjct: 87 PLYI-------EVDQIYHLASPASPPNYXYNPIKTLKTNTIGTL----------NXLGLA 129 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ A+ G Sbjct: 130 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEG 189 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP +++ I + ++G + +YG G R + YV D V L Sbjct: 190 VEVRVARIFNTFGPRXHXNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 248 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 249 VALXNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 300 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K +GW P +E GLNK + ++ Sbjct: 301 KPDIKKAKLXLGWEPVVPLEEGLNKAIHYF 330 >gi|329577490|gb|EGG58932.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1467] Length = 320 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVK--- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 R + ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 111 ------RIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYV 164 Query: 179 ------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVRDWL 224 V + + G H PE I I ++ G + + ++G DG +RD++ Sbjct: 165 ALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 Y+ED + A L LK G + +N+G NN + + +LDA + + E+ Sbjct: 225 YIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQEIP 275 Query: 282 RFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 I R D I SS K K +GW P+ Sbjct: 276 ATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|319902530|ref|YP_004162258.1| GDP-mannose 4,6-dehydratase [Bacteroides helcogenes P 36-108] gi|319417561|gb|ADV44672.1| GDP-mannose 4,6-dehydratase [Bacteroides helcogenes P 36-108] Length = 365 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ +S + D+ D + +++ QPD I N AA+SHV S + T+ + Sbjct: 52 VRDMKRSRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAETDAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--KIYQASTSELFGKVQEVPQRETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y D+V ++L+L+ R GE + + G Sbjct: 225 DARRDWGYARDYVECMWLILQHDRPEDFVIATGEMHTVREFATLAFREVGIDLRWEGTGA 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + ID+ + G ++ + PK + RP + D +K K+ +GW P++ Sbjct: 285 DERGIDV--KTGKVIVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRQT 331 >gi|188591884|ref|YP_001796482.1| gdp-mannose 4,6-dehydratase; nad(p)-binding domain [Cupriavidus taiwanensis LMG 19424] gi|170938258|emb|CAP63243.1| GDP-mannose 4,6-dehydratase; NAD(P)-binding domain [Cupriavidus taiwanensis LMG 19424] Length = 403 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 R ++TG G GS LC L+ +V I + + N + + +Q Sbjct: 30 RALITGITGQDGSYLCELLLGK-GYEVHGIKRRSSLFNTERIDHLYQDPQAQERRLILHH 88 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ QPD I N AA+SHV S + T+ IGT LLE R+ Sbjct: 89 GDMTDTASLVRVVQQSQPDEIYNLAAQSHVQVSFEEPEYTANTDAIGTLRLLEAIRI--- 145 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +K RF Q ST E+YG + + E P+ P SPY+A K + ++ + + YG Sbjct: 146 -LGMEKLT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAAAKLYAYWITVNYREAYG 202 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R+ G LY G+ +RDW + D+V Sbjct: 203 MYACNGILFNHESPVRGETFVTRKITRAIARIALGLQETLYLGNLSALRDWGHARDYVEM 262 Query: 233 LYLVLKK 239 +L+L++ Sbjct: 263 QWLMLQQ 269 >gi|159029613|emb|CAO90274.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 332 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L N V+V+D L+Y G+ +K+I + L + D DR Sbjct: 8 ILVTGGAGYIGSHAVLALKN-AGYSVIVLDNLSY-GHAEIIKDILKVEL---IVGDTRDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+++FAA V S+ + N+ G+ LL+ + ++ D Sbjct: 63 SLLDNLFASRDIAAVMHFAAFIAVGESVQEPAIYYQNNVSGSLTLLQ------AMIAADV 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K +F+ ST +YG + +E+ P++P SPY+A+K + ++ + YG+ + Sbjct: 117 K---KFVFSSTCAIYGMPKEIPMTENHPHHPLSPYAASKEMVEQILRDFDRAYGLKSVAF 173 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S G H PE LIPLA +T + + + ++G DG VRD+++V Sbjct: 174 RYFNASGADPSGLLGEDHQPETHLIPLALLTALKKRDSLSIFGTDYDTPDGTAVRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-I 281 D HV L +L G +N+G N GF + +I + + T L I Sbjct: 234 NDLAQAHVLGLEYLLNGGE-SNVFNLGNGN-----------GFSVREVIETAQAVTGLDI 281 Query: 282 RFIED-RPGHDRRYAIDSS-KIKSEIGWFPQ 310 IE R D I SS K K +GW PQ Sbjct: 282 PVIESPRRAGDAPILIGSSDKAKQVLGWHPQ 312 >gi|212224987|ref|YP_002308223.1| galE-2 UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] gi|212009944|gb|ACJ17326.1| galE-2 UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] Length = 317 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 34/265 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ +L +V V+D L+ AG+L++LK + F F++ D+ Sbjct: 1 MKVLVTGGAGFIGSHLVDRLM-ELGYEVRVLDDLS-AGSLDNLKRWLKHERFEFIEGDMR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +RE + A+++ + + + AA V + TN++ T+ LLE R Sbjct: 59 NREIVEKAVEDVE--VVFHLAANPEVRIGSQSPELLYETNVVITYNLLEAMR-------- 108 Query: 121 DKKDQFRFLQI-STDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K ++L S+ VYG + ED P P S Y K +++ L+ + HT+ Sbjct: 109 --KSGVKYLVFTSSSTVYGDAEVIPTPEDYAPLEPISVYGGAKLAAEALISGYAHTFDFK 166 Query: 179 VLLSNCSN------NYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 L+ +N N+G Y F KL + + + GDG + +L+V D V Sbjct: 167 ALVFRLANIIGERSNHGVIYDFINKLRK-------NPNELEILGDGTQRKSYLHVSDTVD 219 Query: 232 ALYLVL----KKGRIGERYNIGGNN 252 + + K+G+ + YN+G ++ Sbjct: 220 GMLHIFEHFRKEGKTYDAYNLGNDD 244 >gi|170740320|ref|YP_001768975.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168194594|gb|ACA16541.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 391 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 66/367 (17%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVL--VIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIG A+ R LV +++VL +I+++ + + D+ Sbjct: 20 ILITGGAGFIGRAVARALVARGDRVRVLDSLIEQVHGGLARPDDMPDDLPDAVDLRRGDV 79 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L D +++ AAE V +S+ + +++ N +GT +L + L Sbjct: 80 RDPAAVAQVL--IGVDKVIHLAAEVGVGQSMYAVERYVSVNDVGTAVLFQ-------ALI 130 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-----------------DMPYNP--------- 153 Q + R + S+ +YG +GL+ + D P++P Sbjct: 131 QRPVE--RVVVASSMSIYG---EGLYRDAEGRLVEDVVRQPRSGPDAPWDPLDAAGRPLT 185 Query: 154 ------------SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----L 197 +S Y+ +K + + L L YG+ + N YGP + Sbjct: 186 PVPTPEWKRPALASVYALSKYAQERLTLMLAPAYGMEGVALRLWNAYGPGQALSNPYTGV 245 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGGNNERKN 256 + + +R+ G+ ++ DGQ +RD+++V+D ++ L L + G+ YNIG R Sbjct: 246 LAIFASRLHNGAAPVMFEDGQQLRDFVHVDDVAQSFLLALDRPEAAGQVYNIGSGVSRS- 304 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 V E+G LL + +S E+ + R G R D +K ++E+G+ P+ + G Sbjct: 305 ---VSEVGTLLARAMGRSEIRPEIAGKL--RAGDIRHCIPDITKAQTELGYAPRRDFAEG 359 Query: 317 LNKTVCW 323 L + W Sbjct: 360 LAELAAW 366 >gi|320105124|ref|YP_004180715.1| UDP-galactose 4-epimerase [Isosphaera pallida ATCC 43644] gi|319752406|gb|ADV64166.1| UDP-galactose 4-epimerase [Isosphaera pallida ATCC 43644] Length = 331 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 87/360 (24%), Positives = 146/360 (40%), Gaps = 48/360 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++ TGGAG++GSA R+L+ + D L+ GN ++ + +Q + ++ Sbjct: 1 MRILCTGGAGYVGSACLRWLLAHGH-EAFAFDNLS-EGNRAAVPDYAQRLIVG----ELI 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L+ DA+++FAA + V SI + N++GT+ LLE R + Sbjct: 55 DTDLVIDTLRTRSIDAVMHFAALASVPDSISDPSNYYRVNVLGTYSLLEAMR-----AAG 109 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG-- 176 KK F ST YG + E NP +PY TK + ++++ + YG Sbjct: 110 VKKLVFS----STAATYGFHGPEAMPLQETAAKNPETPYGTTKRAGEWMIADYARAYGWG 165 Query: 177 ------IPVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYGDGQNVRDWLYVED 228 ++ N+G + E LIPL + + ++GD RD V D Sbjct: 166 YAIFRYFNAAGADPDGNHGEHRRHESHLIPLTLAVAVGKRPALKIFGDDYPTRDGTCVRD 225 Query: 229 HVRALYLVLKKGRIGERYNIG-------GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V L R ER G G+ E + V A ++ + + Sbjct: 226 YVHTSDLAQAHQRAVERLEPGYGEAFNLGSGEGATVKEVH-------AACERAVGRSIPV 278 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 + RPG D +K E+GW P + + + +T W W + + PD Sbjct: 279 EYAPRRPGDPAVLVADPAKAIRELGWTPCFSDIATIVRTA-------WQWHSRHPDGYPD 331 >gi|302389143|ref|YP_003824964.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] gi|302199771|gb|ADL07341.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] Length = 323 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 62/336 (18%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++ VTGGAG+IGS + + L +V+V D L+ L ++ DI D Sbjct: 3 KVFVTGGAGYIGSHVVKLLTKK-GYEVMVFDNLSTGRRDAVLAG-------ELVEGDILD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + A+ EF+PDA+++FAA+ V S+ + N G LL+ R C Sbjct: 55 HEALERAMDEFRPDAVMHFAAKIVVPESVQKPLLYYENNTCGALNLLKAMR---RCGVN- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-------------YLV 168 + + ST VYG + +ED P NP +PY +KA+ + Y+ Sbjct: 111 -----KLIFSSTAAVYGEPARMPITEDFPLNPVNPYGRSKAAVETVLKDISAAEDFRYVS 165 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNV 220 L + + G ++ G + R G +++YG DG V Sbjct: 166 LRYFNVAG-----ADPEGKIGEMKEDATHLITMCVRTACGKRDKLYVYGTDYPTHDGTCV 220 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D H+ AL +L GR E +N G + G+ + ++ ++ Sbjct: 221 RDYIHVMDLADAHILALEYLLSGGR-SEVFNCG-----------YGRGYSVREVVDEAKK 268 Query: 277 HTEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 T + + + RPG DS KI+ ++GW P Sbjct: 269 VTGVNFQVEYTARRPGDPPELVADSRKIREKLGWKP 304 >gi|159027653|emb|CAO89517.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 360 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 20/330 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ +V I + T N + + I Q + FL Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHIYIDPHQPDAKLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L++ QP + N A+SHV S + + +G LLE R + Sbjct: 65 GDLTDGTTLRRILEQVQPVEVYNLGAQSHVRVSFDAPEYTVDAVGVGVLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q + E++G + + E P+ P SPY+ K + + + +Y Sbjct: 123 --QKRTGIEVRFYQAGSSEMFGKVMEVPQKETTPFYPRSPYACAKVYGHWQTINYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ R+I G LY G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRALARIIAGQQKKLYLGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + NE +I +I F L + Y + R++ RP Sbjct: 241 MWLMLQQEEPDD--YVVATNETYSIREFLDISFQYVNLNWQDYVEFDQ-RYL--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 DS+K + ++GW P E GL K + Sbjct: 296 LLIGDSTKAREKLGWQPSVTFE-GLVKLMV 324 >gi|325110690|ref|YP_004271758.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324970958|gb|ADY61736.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 314 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 36/330 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+ ++ V+ +D ++G+ ++K + F ++ DI Sbjct: 6 VLVTGGAGFLGSHLCDRLI-EMGDDVICVDNF-FSGSKQNIKHLLGHPRFELIRHDIVHP 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I + D + N A + + I T+ +G + L K Sbjct: 64 LFIEA-------DQVYNLACPASPKAYQYNPIKTIKTSTVGMV----------NVLGLAK 106 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGI 177 + R L ST E+YG + E+ P P S Y K ++ L + + + + Sbjct: 107 RCGARVLHTSTSEIYGDPEVHPQPEEYWGNVNPVGPRSCYDEGKRVAESLCINYHLAHQL 166 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 V + N YGP P+ +++ I + + G + LYGDG R + YV+D + Sbjct: 167 EVRIVRIFNTYGPRMHPDDGRVVSNFIMQALHGKPLTLYGDGLQTRSFCYVDDLIEGFIR 226 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RRY 294 ++ + N+G E F + L A++ + + + + E P D ++ Sbjct: 227 MMNQTETIGPVNLGNPGE-------FTMKQLAQAILEITGATSGMTH--EPLPQDDPKQR 277 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK + + W P+ N+ GL +T+ +Y Sbjct: 278 CPDISKAEKYLNWRPETNLHQGLERTIEFY 307 >gi|224471665|dbj|BAH10700.2| GDP-mannose 4,6-dehydratase [Nicotiana benthamiana] Length = 367 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 142/323 (43%), Gaps = 24/323 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG G GS L +L+ D +V + + + N + + I + Sbjct: 25 LVTGITGQDGSYLTEFLL-DKGYEVHGLIRRSSNFNTHRVNHIYIDPHNAHKARMKLHYA 83 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L PD + N AA+SHV S D G LLE R S Sbjct: 84 DVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR---SH 140 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +S + R+ Q + E++GS SE P++P SPY+ +K ++ + + + YGI Sbjct: 141 ISATGRSHIRYYQAGSSEMFGSTPPPQ-SEATPFHPRSPYAVSKCAAHWYTVNYREAYGI 199 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVR 231 +L ++ S G +F + I A+ R+ G S +FL G+ Q RDW + D+V Sbjct: 200 FACNGILFNHESPRRGE-NFVTRKITRAVGRIKIGLQSKLFL-GNLQASRDWGFAGDYVE 257 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++++L++ + + + E ++ E+ F L K + + F RP Sbjct: 258 AMWMMLQQEKPDD--YVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYF---RPTEV 312 Query: 292 RRYAIDSSKIKSEIGWFPQENME 314 DSSK + +GW P+ E Sbjct: 313 DNLKGDSSKARKVLGWKPRVGFE 335 >gi|251798149|ref|YP_003012880.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247545775|gb|ACT02794.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 325 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 150/336 (44%), Gaps = 32/336 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ V +D + G L +S ++ + Sbjct: 1 MKILVTGGAGFIGSHLVESLLAAGH-TVWTLDDFS-NGRPEFLAHLSNHPRHRLIEGSVL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ ++ + D + + AA V ++ + I NI GT +LE L+ Sbjct: 59 DRKLVKKCMSHV--DTVYHLAAVLGVKNTVEDPIKVIEGNIDGTRNILE--------LAY 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHT 174 + + F ST E+YG +K F+E D Y S Y+ K+ +++ A+ Sbjct: 109 PSRTKVIF--ASTSEIYGKNEKLPFNEMSDRVYGAPSIHRWSYATAKSIDEHMCFAYA-A 165 Query: 175 YGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+PV + N YGP + ++ IT ++G + +YG G R + +V+D V Sbjct: 166 KGLPVTVLRYFNAYGPRQTNSQYGGVVARFITAALKGEPLEVYGSGTQRRCFTFVDDTVS 225 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNI---DIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L G +N+G + I ++ ++ +I KSY+ + ED P Sbjct: 226 GTIAALSPEADGLAFNVGSTHSVTIIQLAQLIIQLSRSTSPVILKSYAEAYGPGY-EDMP 284 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ ++ +G+ P ++E GL KT+ WY Sbjct: 285 AREP----DLTRAETILGYKPSVSLEQGLIKTIEWY 316 >gi|260902133|ref|ZP_05910528.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ4037] gi|308109949|gb|EFO47489.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ4037] Length = 338 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 152/353 (43%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + +F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLERIEKVCGVKPTFIEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + ALK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKAALVEALKAHNIEAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGEPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P I+++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-ISQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV AL V K + YN+G N +++V +P Sbjct: 228 GVRDYIHVMDLSDGHVAALEKVGSKAGL-HIYNLGTGNGYSVLEMVKAFESACGKNVP-- 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D SK +E+GW +E T W +N Sbjct: 285 ------YQLVERRPGDIAECWADPSKAMNELGWKASRTLEEMTGDTWRWQSNN 331 >gi|292493301|ref|YP_003528740.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] gi|291581896|gb|ADE16353.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] Length = 329 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 61/359 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS-----FL 55 M++++TGG GFIG+ L + DK+ G +N+ E +L + Sbjct: 1 MKVLITGGTGFIGTRLALKCLEKG-------DKVRLLGQVNNAAEEGNRDLVERQGGEIV 53 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + D++ I A++ + + + AA H + + F N+ GT LLE +R Sbjct: 54 IGSVTDKDVIDKAIEGVE--IVYHLAAAQH--EANVPDQHFWEVNVAGTRNLLEASR--- 106 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + RF+ ST VYG+ +G ED P P + Y TK + LVL++ Sbjct: 107 ------KDNVKRFVHGSTIGVYGAAMEGEIDEDTPLQPDNIYGITKREGEKLVLSYKDR- 159 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +PV++ S YGP +L L + + I+ F+ G G N ++V+D + L+L Sbjct: 160 -LPVVIIRISETYGPGD--RRL--LKLLKAIDKKMFFMIGKGDNRHQLIFVDDLIEGLWL 214 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIG----------------FLLDALIPKSYSHT 278 K +G+ + + G +V I FL+ A++ ++ Sbjct: 215 AAKNDEALGQVFVLAGKEILTTNQMVATIAKVLGVTQRKLRAPLWPFLITAVVMEN---- 270 Query: 279 ELIRFIEDRPGHDRR--------YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 L+R + +P RR + K S + + P+ + E G+ T WY ++N+ Sbjct: 271 -LLRPLHIQPPLHRRRMDFFKKSFCFSQDKSSSILKFEPKTSFEDGIVATAQWYKEHNY 328 >gi|302542991|ref|ZP_07295333.1| UDP-glucose 4-epimerase [Streptomyces hygroscopicus ATCC 53653] gi|302460609|gb|EFL23702.1| UDP-glucose 4-epimerase [Streptomyces himastatinicus ATCC 53653] Length = 323 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 54/337 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + +L+ + QV V+D L+ G+ + ++ F++ I D Sbjct: 8 KYLVTGGAGYVGSVVAAHLL-EAGHQVTVLDDLS-TGHREGVPAGAE-----FIEGRIQD 60 Query: 62 RECIRSALK--EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 A K + D +++FAA S V S++ +++ N+ GT LL R Sbjct: 61 ------AAKWLDASYDGVLHFAASSQVGESVVNPEKYWVNNVGGTTALLAAMR------- 107 Query: 120 QDKKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R L S T YG D +ED P++PY ATK + D+++ +G+ Sbjct: 108 ---DAGVRTLVFSSTAATYGEPDDVPITEDSATAPTNPYGATKLAVDHMISGECAAHGLA 164 Query: 179 VL------LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDW 223 + ++ YG H PE LIPL + ++ +G + ++G DG VRD+ Sbjct: 165 AVSLRYFNVAGAYGAYGERHEPESHLIPL-VLQVAQGRREAISVFGDDYPTPDGTCVRDY 223 Query: 224 LYVEDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++V D A L L GE N+G N +++ + + IP+ Sbjct: 224 IHVADLADAHLLALGAATSGEHLICNLGNGNGFSVREVIETVRQVTGHPIPE-------- 275 Query: 282 RFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGL 317 + DR G D + S+ + K +GW P + G+ Sbjct: 276 -VVADRRGGDPAVLVASAERAKERLGWRPSRDDLKGI 311 >gi|160889724|ref|ZP_02070727.1| hypothetical protein BACUNI_02154 [Bacteroides uniformis ATCC 8492] gi|156860716|gb|EDO54147.1| hypothetical protein BACUNI_02154 [Bacteroides uniformis ATCC 8492] Length = 358 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + ++ QPD I N AA+SHV S + T+ + Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVSFDVPEYTAETDAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + SE P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--RIYQASTSELFGKVQEVPQSETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y +D++ ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYIECMWLILQHDTPEDFVIATGEMHTVREFATLAFREVGITLRWEGQGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID + G +L + PK + RP + D +K K+ +GW P++ Sbjct: 285 DEKGIDT--QTGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRQT 331 >gi|47567274|ref|ZP_00237988.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] gi|47556117|gb|EAL14454.1| UDP-glucose 4-epimerase [Bacillus cereus G9241] Length = 321 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVKR-GYDVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 QNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ + E+ ++ L S S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEK----CIKEVAAVIKKLT-NSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K++ + + + E GL +T+ W+ + N Sbjct: 281 EIPNRR--PDVTKLRELVQFQAKVTWEQGLKETIKWFREEN 319 >gi|34764375|ref|ZP_00145192.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885849|gb|EAA23208.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 98 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG AGFIG+ +Y++ + I+V+V+D LTYAGNL ++KE + + F +VDI DR Sbjct: 5 LITGAAGFIGANFLKYILKKYEDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDR 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSI 90 + I E Q D IVNFAAESHVDRSI Sbjct: 65 KEIERIFTENQVDYIVNFAAESHVDRSI 92 >gi|307299960|ref|ZP_07579745.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] gi|306904849|gb|EFN35432.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] Length = 328 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 93/331 (28%), Positives = 150/331 (45%), Gaps = 65/331 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L + I+ +V D LT GN ++++ F+Q DI D Sbjct: 5 RILVTGGAGYIGSHTAKLLRLE-GIEPVVYDNLT-TGNRSAVR------WGPFVQGDILD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ QPDA+++FAA ++V S+ ++ N+ GT LL+ R Q Sbjct: 57 GRHLIEVIEAHQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACR-------QT 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 D+ F S+ YG E P P +PY TK +++++ + + + + Sbjct: 110 GVDKVIF--SSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVS 167 Query: 181 ---LSNCS----NNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 + C + G +H PE LIP A+ SH+ ++G DG VRD+++ Sbjct: 168 LRYFNACGADPEGDLGEWHDPETHLIPRALMAAAGRISHLEIFGEDYDTPDGTCVRDYIH 227 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV A Y L KG GGN + +G + +S E++ Sbjct: 228 VADLASAHVLA-YRHLAKG--------GGN-------VALNLG------TGRGFSIKEVL 265 Query: 282 RFIEDRPGHD------RRYAIDSSKIKSEIG 306 R I + GHD RR A D + ++ G Sbjct: 266 RTIGEITGHDVPVVFRRRRAGDPPALYADAG 296 >gi|239629873|ref|ZP_04672904.1| nucleoside-diphosphate-sugar epimerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066994|ref|YP_003789017.1| nucleoside-diphosphate-sugar epimerase [Lactobacillus casei str. Zhang] gi|239527485|gb|EEQ66486.1| nucleoside-diphosphate-sugar epimerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439401|gb|ADK19167.1| Nucleoside-diphosphate-sugar epimerase [Lactobacillus casei str. Zhang] Length = 316 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 31/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDR 62 +VTGGAGFIGS L L+ D K V ++D L+ L+E I S+ +F + I D Sbjct: 10 LVTGGAGFIGSNLTELLLTDPKNTVTIVDDLSMG-----LRENIPDSDRVTFYEHSITDH 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + + D IV AA + V S+ T ++ +E L S L + Sbjct: 65 DFMSRLLIDGKFDYIVLLAAIASVADSV--------ERPYATHLVNQEANL--SMLETLR 114 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q F ++ S+ VYG +E M P + Y+ K +++ VL +G Y +PV Sbjct: 115 THQITFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPV 174 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P+ ++ M++ +GDG+ RD++YV D VRA+ Sbjct: 175 VCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRG 234 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ + N ++ +++ ++ L+ L K+ T + E R G R Sbjct: 235 LLETPSARDDVFNVANGQQTSLN---QVAKELEKLTGKTLHAT----YQEPRLGDIRDSY 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVC 322 K+ + + P + GL K V Sbjct: 288 AQVDKL-DQFDFMPHTPLAEGLAKYVA 313 >gi|171911001|ref|ZP_02926471.1| NAD-dependent epimerase/dehydratase [Verrucomicrobium spinosum DSM 4136] Length = 341 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 149/341 (43%), Gaps = 32/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFL 55 R +VTG AGFIGS L L+ + V+ +D L G L++L+++ Q+ + F+F Sbjct: 17 RWVVTGAAGFIGSHLVEKLLRTGQT-VVGVDNLA-TGKLHNLEQVQQAVGERAWSRFTFA 74 Query: 56 QVDICDRECIRSALKEFQ-PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + D+ + L + D +++ A V SI E N+ G LL Sbjct: 75 ERDV---RLLDDCLHILEGADHVLHQAGIGSVPLSIEKPREVHDANVTGFLNLL------ 125 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 +S + R + S+ VYG ED P SPY+A+K + + Sbjct: 126 ---ISARQHSLKRVVYASSSSVYGDDPVLPKREDSIGTPLSPYAASKYMDEVYAATFQKC 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 +G+ + N +GP P +IPL I+ + + VF+ GDG RD+ YV + V Sbjct: 183 HGLESVGLRYFNIFGPRQDPHGAYAAVIPLWISLLRKQEPVFINGDGSTTRDFCYVANVV 242 Query: 231 RALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED- 286 +A L E +N+G R + +F L DA+ ++ + L D Sbjct: 243 QANILAATAEHPDLRCEAFNVGLGG-RTTLTELFNA--LRDAVAHRAPELSGLTPTYRDF 299 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 RPG + D SK + +G+ P ++ GL + + WY DN Sbjct: 300 RPGDIQHSMADISKAQRLLGYEPTHSVADGLGEALEWYWDN 340 >gi|152974263|ref|YP_001373780.1| NAD-dependent epimerase/dehydratase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023015|gb|ABS20785.1| NAD-dependent epimerase/dehydratase [Bacillus cytotoxicus NVH 391-98] gi|293339156|gb|ADE43880.1| UDP-XylNAc synthase [Bacillus cytotoxicus NVH 391-98] Length = 321 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 47/341 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TGGAGFIGS L LV V ++D Y G +E++ + + + I D Sbjct: 4 RCLITGGAGFIGSHLAEELVKRGH-PVTIVDNF-YKGKSKYHEELTGN--IPIIPISILD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSMHELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGL--FSED--MPYNPSS----PYSATKASSDYLVLAWGH 173 KK F ST EVYG KG FSED Y +S Y+ K + L L + Sbjct: 112 KKVIFA----STSEVYG---KGTPPFSEDDDRLYGATSKIRWSYAICKTLEETLCLGYA- 163 Query: 174 TYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V Sbjct: 164 LQGLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGDDLLVYGDGKQTRCFTYVSDAV 223 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-----IP--KSYSHTELIRF 283 A + + GE NIG +E+ ++ +I L + +P K Y H Sbjct: 224 EATIAAMDEKVNGEIINIGSEDEKSIQEVAQDIHQLTHSSSKIVHVPFEKVYPHG----- 278 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E+ P D +K+K + P + E GL +T+ W+ Sbjct: 279 FEEIPNRKP----DVTKLKEMCQFHPNVSWEQGLKETIQWF 315 >gi|323137040|ref|ZP_08072120.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322397801|gb|EFY00323.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 325 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 26/331 (7%) Query: 4 IVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEI--SQSNLFSFLQVDIC 60 +VTG GFIGS L R + +++ L+ + +G++ L ++ + + DI Sbjct: 5 LVTGAGGFIGSHLVERLIARGWRVRCLL--RYGSSGSVGFLDDVLTRSPDQLEIRRGDII 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR+ + + D I + AA + S + N+ G +LE R Sbjct: 63 DRDFVSKCCEGV--DTIFHLAARISIPYSYEAPRDCFDVNVTGVLNILEGAR-------- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST EV+G+ ++ E P SPYSA+K ++D LV ++ ++G P + Sbjct: 113 -RHGVRRVIHTSTSEVFGTAERVPMDETHPLKGQSPYSASKIAADKLVESYVCSFGAPAI 171 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N YGP P +I I + + V L G RD+ +V D V + Sbjct: 172 VIRPFNTYGPRQSPRAVISTIIQQALTSDCVRL-GALWPRRDFTFVADTVSGFVRAAEAT 230 Query: 241 RIGERY-NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RYAID 297 N+G ++ ++ I +L+ P +RP R D Sbjct: 231 GAEGAVCNLGTGHDISVGELAIMILRILEVDRPIVAEDA------RERPAASEVGRLLSD 284 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + + +GW P+ ++E GL +T+ W+ N Sbjct: 285 NRRAAEILGWRPETSLEDGLRQTIDWWKANT 315 >gi|330812709|ref|YP_004357171.1| GDP-mannose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380817|gb|AEA72167.1| putative GDP-mannose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 142/331 (42%), Gaps = 57/331 (17%) Query: 2 RLIVTGGAGFIGSAL-CRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 RL VTG +GF+G L R +DL QV+ + + D+ Sbjct: 4 RLFVTGLSGFVGRHLKSRLNGHDLAWQVMPVAA----------------------RYDLM 41 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE--ETRLWWSCL 118 D + + E PDA+++ A ++ V + + N++GT LL+ +TR + Sbjct: 42 DAKTLEGLWPEI-PDAVIHLAGQTFVPEAFRDPARTLHINLLGTLNLLQALKTRGFTGT- 99 Query: 119 SQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 FL +S+ +VYG + D +E +P +PY+ +K S++ L L WG + G Sbjct: 100 ---------FLYVSSGDVYGQVSEDHLPITELQLPSPRNPYAVSKLSAELLSLQWGMSEG 150 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLA---ITRMIEGSHV--FLYGDGQNVRDWLYVEDHVR 231 PVL++ N+ GP +I A I+R+ G GD RD+L V D + Sbjct: 151 WPVLVARPFNHIGPGQKDSFVIASAARQISRIRLGLQPARLQVGDIDVTRDFLDVGDVIS 210 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----R 287 A +L KG G+ YNI E+ ++ ++G + ++ I+D R Sbjct: 211 AYVALLDKGAPGQVYNICSGREQSIRSLIEQLGDIAQI----------DVQLIQDPARLR 260 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 RR +K++ GW P+ + L Sbjct: 261 RAEQRRVCGSPAKLRQATGWTPETTTQQSLR 291 >gi|114769690|ref|ZP_01447300.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] gi|114549395|gb|EAU52277.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] Length = 337 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 53/358 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 MR++VTGGAG+IGS C L+ +V VID L+ + +L ++ I+ L F D Sbjct: 1 MRVLVTGGAGYIGSHTCVELLKAGH-EVFVIDNLSNGHETSLERVRLITNCEL-QFTNAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + F+PD++++FA V S+ + N+ G+ LL + + Sbjct: 59 IRDANALDKIFNTFKPDSVIHFAGLKAVGESVANPLMYYDVNVGGSVSLL-------TAM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 S+ ++ F +T VYG + E+ P NP +PY TK + ++ W Sbjct: 112 SKAGCNKIVFSSSAT--VYGKPQYLPYDEEHPTNPVNPYGRTKLIIENIINDWTEVDTNR 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DGQ 218 Y PV ++ S G P P L+P I ++ G H+ ++G DG Sbjct: 170 KGVILRYFNPV-GAHESGQIGEEPIGIPNNLMPY-IAQVAGGRREHLNIFGNEYDTSDGT 227 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D A L + ++ + NIG +++V F + +P + Sbjct: 228 GARDYIHVVDLALAHIGALNQNKLDMFDVLNIGAGKSTTVLELVSN--FEEISGVPIKF- 284 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 +++ R G + DSSK + W P+ N+ + +C ++ W W+ L Sbjct: 285 -----KYLPRREGDLAAFWADSSKAFEKTSWKPERNINN-----IC---EDTWRWQKL 329 >gi|328953334|ref|YP_004370668.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] gi|328453658|gb|AEB09487.1| dTDP-glucose 4,6-dehydratase [Desulfobacca acetoxidans DSM 11109] Length = 347 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 146/336 (43%), Gaps = 37/336 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAG IGS L R L V+V+D L+ A N+ +L + F++ I Sbjct: 13 ILVTGGAGAIGSNLTRALGELGARLVIVLDDLSSASRWNVPALPNVL------FVEGSIL 66 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ E +PD + + AA S+ + + N +GT +L+ Q Sbjct: 67 DEVELKRVFFE-RPDIVYHLAALFANQNSLDHPETDLLVNGLGTLKILQ--------YCQ 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q S +YGS +E+ M + SSPY TK + + H Y +PV Sbjct: 118 MAGVQRCVYASSGCSIYGSSAPLPLTEEFMSLHLSSPYQITKMLGELYGNFFHHHYDLPV 177 Query: 180 LLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + + N+YGP P + +IP I ++G + + G G+ RD+ YV D V L Sbjct: 178 VKARFFNSYGPGEIPGQYRNVIPNFIYWAMQGQTLPITGTGEETRDFTYVGDIVDGL--- 234 Query: 237 LKKG----RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L+ G IG+ +N+ E + D L +I + ++F E R + Sbjct: 235 LRAGYFESAIGQEFNLASGVETRIGD--------LAQMINDQVGNEAGVKFTERRKWDTK 286 Query: 293 -RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R + ++ IG+ P E GL T+ W+ DN Sbjct: 287 PRLLASVDRAQNLIGYQPHTPFEEGLKNTIAWFKDN 322 >gi|229827868|ref|ZP_04453937.1| hypothetical protein GCWU000182_03260 [Abiotrophia defectiva ATCC 49176] gi|229788067|gb|EEP24181.1| hypothetical protein GCWU000182_03260 [Abiotrophia defectiva ATCC 49176] Length = 338 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/365 (26%), Positives = 156/365 (42%), Gaps = 65/365 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 MR++VTGGAG+IGS C L+N +V+V D Y ++ S+K + + F + D Sbjct: 1 MRVLVTGGAGYIGSHTCVELLN-AGHEVVVFDNF-YNSSMESIKRVEKITGKSIKFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + E + DA+++FA V S+ E+ N+ GT +L+E + Sbjct: 59 MLDSAAMDKIFAENKIDAVIHFAGYKAVGESVHKPLEYYYNNLTGTLLLVEAMK------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATK------------ASSD 165 K + S+ VYG +K +EDMP+ SSPY ATK A D Sbjct: 113 ---KHGVKNIIFSSSATVYGEPEKLPLTEDMPHGAASSPYGATKMMQEEMFKDFHVADKD 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIP-LAITRMIEGSHVFLYG------DGQ 218 + V+ + I S P P L+P +A + + + ++G DG Sbjct: 170 FSVILLRYFNPIGAHESGLIGE-DPKGIPNNLVPYIAQVAVGKLPKLGIFGDDYDTADGT 228 Query: 219 NVRDWLYVEDHVRALYLVLKK------GRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +RD+++V D R L LKK RI YN+G N V E+ + Sbjct: 229 CLRDYIHVVDLARGHVLALKKFEEEPAVRI---YNLGTGNGIS----VLEVFHAFEKACG 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAI---DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 K ++ E +P D + DSSK + E+G+ E G+ + ++W Sbjct: 282 KELAY-------EIKPRRDGDVPVCYADSSKAERELGF----KAEYGIERMCA----DSW 326 Query: 330 WWRPL 334 W+ + Sbjct: 327 RWQSM 331 >gi|150010203|ref|YP_001304946.1| putative nucleotide-sugar dehydratase [Parabacteroides distasonis ATCC 8503] gi|149938627|gb|ABR45324.1| putative nucleotide-sugar dehydratase [Parabacteroides distasonis ATCC 8503] Length = 316 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 49/338 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQVDI 59 ++TG +G I SA L+ D + + L I + N + ++ Q + LF+F+Q DI Sbjct: 1 MITGASGLICSAFIDQLMGDNERENLGIKIYAISRNKDYAQKRFQQYWNNPLFTFMQHDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I+ + D I++ A+ + R T+ +GT + LW + Sbjct: 61 -----IKPLSLDVPLDYIIHGASNASPKR--------YATDPVGTM----KANLWGVANT 103 Query: 120 QD--KKDQFRFLQISTDEVYGSLDKGLFSEDMP-----YNPSSPYSATKASSDYLVLAWG 172 D K+ Q R L IS+ EVYG D F+E N + Y + K +S+ L +A+ Sbjct: 104 LDLAKEKQARLLYISSGEVYGEGDGTDFTETYSGYVDCLNLRACYPSGKRASETLCIAYK 163 Query: 173 HTYGIPVLLSNCSNNYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ ++++ + YG ++ + + G + L +GQ +R + +V D Sbjct: 164 EQYGVDIVIARPCHIYGSDIGRDDRAFAQFLRKAQVGEDIILKSEGQQIRSYCHVMDCAS 223 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 AL+ +L +G+ GE YNI R++I + E+ ++ ++ ++ + D P Sbjct: 224 ALFYILLRGKDGEAYNIA---NRESILSIKELAEMI--------ANMAGVKIVYDIPSEQ 272 Query: 292 --------RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +R +DSSK++S +GW P +E GLN+ + Sbjct: 273 EVKGYSKVQRAVLDSSKLES-LGWKPFIFLEDGLNRVL 309 >gi|220908666|ref|YP_002483977.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] gi|219865277|gb|ACL45616.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] Length = 321 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 35/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ +V+ +D Y G+ +L F L+ D+ Sbjct: 1 MRILVTGGAGFIGSHLIDRLMEQGH-EVICLDNF-YTGSKQNLLHWLNHPRFELLRHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR +++ I + A + + I TN++GT + L Sbjct: 59 --EPIRLEVEQ-----IYHLACPASPVHYQYNPVKTIKTNVMGTM----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + RFL ST EVYG + SED P S Y K ++ L + Sbjct: 102 AKRVKARFLLASTSEVYGDPEVHPQSEDYRGNVNPIGIRSCYDEGKRVAETLSFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + ++ N YGP +++ + + ++G+ + +YGDG R + YV D V L Sbjct: 162 NVEIRVARIFNTYGPRMLENDGRVVSNFVVQSLKGTPLTVYGDGSQTRSFCYVSDLVEGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G E + + +I +++ + + +D P +R Sbjct: 222 MRLMNGDHTGP-INLGNPEEYTVLQLAQKIQGMINP-----GAEIQFKPLPQDDP---QR 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVC 322 D ++ KS +GW P +E GL +T+ Sbjct: 273 RKPDITRAKSLLGWQPTIALEDGLERTIA 301 >gi|67920449|ref|ZP_00513969.1| GDP-mannose 4,6-dehydratase [Crocosphaera watsonii WH 8501] gi|67857933|gb|EAM53172.1| GDP-mannose 4,6-dehydratase [Crocosphaera watsonii WH 8501] Length = 362 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 143/323 (44%), Gaps = 19/323 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV 57 R ++TG G GS L L+ + +V I + T N + + + Q++ FL Sbjct: 6 RALITGITGQDGSYLSELLL-EKGYEVHGIIRRTSTFNTDRIDHMYIDPHQNDAQLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L+E QP I N A+SHV S + + + +GT +LE R + Sbjct: 65 GDLTDGTTLRRILEEVQPFEIYNLGAQSHVRVSFDSPEYTVESVGMGTLRILEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + RF Q + E++G + E P+ P SPY K + + L + +Y Sbjct: 123 --QQRTGIEVRFYQAGSSEMFGKVQDVPQKETTPFYPRSPYGCAKVYAHWQTLNYRESYD 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R++ + LY G+ + RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAIARIVAKTQKKLYLGNLDSKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + E ++ +I F L + Y + R++ RP Sbjct: 241 MWLMLQQNEADD--YVVATGETHSVREFLKIAFEYVNLNWEDYVDFDK-RYL--RPAEVD 295 Query: 293 RYAIDSSKIKSEIGWFPQENMES 315 D +K K+++GW P E Sbjct: 296 LLIGDPNKAKTKLGWEPSVTFEQ 318 >gi|307592115|ref|YP_003899706.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306985760|gb|ADN17640.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 714 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 152/330 (46%), Gaps = 47/330 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IG + L V+V+D L Y G+ ++E+ Q+ L + DI +R Sbjct: 11 ILVTGGAGYIGCHAVKAL-QKAGYGVIVLDNLVY-GHREIVEEVLQAEL---IIGDINNR 65 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + DA+++FAA ++V S++ ++ N++GT LLE + ++ + Sbjct: 66 PLLDEIFSRYSIDAVMHFAAYAYVGESMMDPAKYYRNNVVGTLTLLE------AMVAANV 119 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K R + ST YG + +ED P NP +PY +K ++ ++ + YG+ + Sbjct: 120 K---RIVFSSTCATYGVPESIPVTEDQPQNPINPYGRSKLMAEKILADFDRAYGLKSVCF 176 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL + T + + + G DG +RD+++V Sbjct: 177 RYFNAAGADPQGLLGEKHEPETHLIPLVLQTALGLRDSISILGTDYPLPDGTCIRDYIHV 236 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIR 282 D A L L+ KG +N+G + GF + +I + T + I+ Sbjct: 237 VDLANAHILGLEYLLKGEESNVFNLGNSK-----------GFSVREVIETAKVVTGKPIK 285 Query: 283 FIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 IE+ R G S K + +GW PQ Sbjct: 286 VIEEKRRLGDPPVLVGSSEKAQKILGWRPQ 315 >gi|330952362|gb|EGH52622.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae Cit 7] Length = 331 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 42/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + + L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVAKRLC-ELGVEVVGID------NLNDYYSVELKQSRLAILQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDAEGLSALFAQNGFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CR---------QHRPAHLIYASSSSVYGANTRMPFQIEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRTTGLRFFTVYGPWGRPDMALFKFTKAMLAGQPVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL--YLVLKKGRIG-----ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V ++ +L +G + +NIG K ++ V D L E R Sbjct: 225 VESILRLRLLPPDPVGSEPPHQLFNIGRGQPVKLLEFV-------DCLEAALGLRAER-R 276 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ + G + D S + I + PQ +++ G+ V WY ++ Sbjct: 277 YLPLQAGDVLQTWADVSALSQWIDFQPQVSVDIGVRAFVDWYREH 321 >gi|325000753|ref|ZP_08121865.1| GDP-mannose 4,6-dehydratase [Pseudonocardia sp. P1] Length = 344 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 20/274 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQ-SNLFSFLQVDI 59 R ++TG G GS L +L++ QV + + G N K +S+ ++ F+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLSQ-GYQVWGLIR----GQANPRKTRVSRLASELDFVDGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + SA+ QPD + N A S V S A+ N G +LE R+ S LS Sbjct: 59 MDQGSLVSAVDTVQPDEVYNLGAISFVPMSWQQAELVTEVNGTGVLRMLEAIRMV-SGLS 117 Query: 120 QDKK----DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + Q RF Q S+ E++G + E ++P SPY A KA Y+ + ++ Sbjct: 118 PSRTASPDGQIRFYQASSSEMFGKAAETPQRETTLFHPRSPYGAAKAYGHYITRNYRESF 177 Query: 176 GIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVR 231 G+ + N+ P F + I LA+ R+ G G+ VRDW Y D+VR Sbjct: 178 GMYAVSGMLFNHESPRRGQEFVTRKISLAVARIKLGLQRDLALGNLDAVRDWGYAGDYVR 237 Query: 232 ALYLVLKKGRIGERYNIGG---NNERKNIDIVFE 262 A++L+L++ + Y IG ++ R + I F+ Sbjct: 238 AMHLMLQQDE-ADDYVIGTGQMHSVRDAVQIAFD 270 >gi|15838870|ref|NP_299558.1| nucleotide sugar epimerase [Xylella fastidiosa 9a5c] gi|9107440|gb|AAF85078.1|AE004040_3 nucleotide sugar epimerase [Xylella fastidiosa 9a5c] Length = 342 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 19/236 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG+ +CR L ND V+ +D Y L + + Sbjct: 20 MTVLVTGAAGFIGAHVCRALAARND---TVVGLDNYNAYYDPQLKRDRVTALCPDVHIRT 76 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E QPD +V+ AA++ V SI ++ +N++G +LE R Sbjct: 77 LDLTDRERCAALFNEVQPDQVVHLAAQAGVRYSIENPHAYVDSNLVGFLNVLELCR---H 133 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C Q + S+ VYG FSE + P S Y ATK +++ + ++ Y Sbjct: 134 CRVQ------HLVYASSSSVYGDSATPPFSEQQRVDQPRSLYGATKVANEVMAYSYAQLY 187 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHV 230 G+ YGP+ P+ + PL +R ++EG + ++ G+ RD+ ++ D V Sbjct: 188 GLRATGLRFFTVYGPWGRPD-MAPLIFSRAVLEGRPIEVFNHGRMERDFTFINDIV 242 >gi|45358653|ref|NP_988210.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis S2] gi|45047519|emb|CAF30646.1| UDP-glucose 4-epimerase related [Methanococcus maripaludis S2] Length = 306 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 46/328 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++++VTGGAGFIGS + L+ + V ++D L+ GN +L ++ F+ DI Sbjct: 15 LKILVTGGAGFIGSHIVDMLIENGH-DVSILDNLS-TGNEKNLNSSAK-----FINGDIL 67 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + +++ AA+ +V S+ NI+GT +LE+ + + Sbjct: 68 DKNLDLTGF-----ECVIHEAAQINVRTSVENPSLDANINILGTVNILEKMKEYGV---- 118 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG + E P SPY +K ++ + + Y I Sbjct: 119 -KKIIFSS---SGGAVYGEPEYLPVDEKHSLKPLSPYGLSKFCAEEYIKLYNMLYDIEYC 174 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P +I + I +M +G +YGDG RD++ V+D RA + L Sbjct: 175 ILRYSNVYGERQDPLGEAGVISIFIDKMKKGEVPVIYGDGNQTRDFVNVKDVARANLMAL 234 Query: 238 K-KGRIGERYNIGGNNERKNIDIVF-----EIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 K I NIG E +++ +F EIGF D + K +R G Sbjct: 235 NWKNEI---VNIGSGKET-SVNELFKIISSEIGFDKDPIYKK------------EREGEV 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 + ID SK KS +GW P+ ++ G+ K Sbjct: 279 YKIYIDYSKAKS-LGWMPEVELDDGIKK 305 >gi|299137254|ref|ZP_07030436.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX8] gi|298600659|gb|EFI56815.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX8] Length = 322 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 44/328 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M L+VTGGAG+IG + L+ +V V+D L ++ K F++ DI Sbjct: 1 MNLLVTGGAGYIGGTVSTILMQAGH-RVTVLDNLCHS------KRAELPVGAEFVEADIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L+E +PD +++FAA S+ + + N T LLE + Sbjct: 54 DRPRVEALLRELKPDGVLHFAALIEAGESMQKPEIYFRNNTASTLALLE---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIPV 179 R + ST VYG E P++ Y +K + + L W H +G+ Sbjct: 105 HATGTNRLVFSSTAAVYGEPKSTPIEETAALAPTNAYGESKLMVEQM-LGWFHRVHGLRY 163 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLY 225 ++ G H PE +IPL + + + + +YG DG +RD+++ Sbjct: 164 ASLRYFNVAGALPGRGEAHEPETHIIPLILDVALGRRASINIYGDDYPTPDGTCIRDYIH 223 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V D A L +K +GER ER +++ GF + +I + T E Sbjct: 224 VRDLADAHILAIKA--LGER-------ERMILNLGNGSGFSVKEVIASARRVTGHAIPAE 274 Query: 286 DRP---GHDRRYAIDSSKIKSEIGWFPQ 310 +P G R S K K+E+GW P+ Sbjct: 275 IKPRRDGDPARLVAGSEKAKTELGWQPE 302 >gi|255088221|ref|XP_002506033.1| predicted protein [Micromonas sp. RCC299] gi|226521304|gb|ACO67291.1| predicted protein [Micromonas sp. RCC299] Length = 343 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 138/330 (41%), Gaps = 41/330 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L YL+ V+ +D N I + N F ++ D+ + Sbjct: 22 RVLVTGGAGFVGSHLIDYLMARGD-HVMCLDNFFTGSKENIQHHIGKPN-FEVIRHDVVE 79 Query: 62 R---ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 EC D + + A + + I TN+IGT + L Sbjct: 80 PILLEC----------DQVYHLACPASPVHYKFNPVKTIKTNVIGTL----------NML 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + RFL ST EVYG + +E+ P S Y K ++ L + Sbjct: 120 GLAKRVKARFLLTSTSEVYGDPLQHPQTEEYWGNVNPIGERSCYDEGKRCAETLAFDYYR 179 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+ + ++ N YGP + +++ + + IEG+ + +YGDG R + YV D V+ Sbjct: 180 EHGLEIRVARIFNTYGPRMALDDGRVVSNFVKQAIEGTPMTIYGDGTQTRSFQYVSDLVK 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L ++ G NIG E ++ ++ +++ Y D PG Sbjct: 240 GLVALMDGDHTGP-VNIGNPGEFTMKELADKVREVVNPDATTVYKEN-----TADDPG-- 291 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R D +K K +GW P + GL K V Sbjct: 292 -RRKPDITKAKELLGWEPVVPLAEGLQKMV 320 >gi|219888743|gb|ACL54746.1| unknown [Zea mays] Length = 285 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 22/260 (8%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 6 ADLSDSSSLRRALDAISPDEVYNLAAQSHVAVSFEIPDYTADVTATGALRLLEAVRL--- 62 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q + E++GS ED P++P SPY+A K ++ + + + YG Sbjct: 63 -----SRKPMRYYQAGSSEMFGSTPPPQ-REDTPFHPRSPYAAAKVAAHWYTVNYREAYG 116 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + VL ++ S G +F + I A+ R+ G + VFL G+ RDW + D+V Sbjct: 117 VFACNGVLFNHESPRRGE-NFVTRKITRAVGRIKVGLQTRVFL-GNLSAARDWGFAGDYV 174 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++L+L++ + G+ + E ++ + F L K + + F RP Sbjct: 175 EAMWLMLQQEQPGD--YVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYF---RPAE 229 Query: 291 DRRYAIDSSKIKSEIGWFPQ 310 D++K + + W P+ Sbjct: 230 VDSLKGDATKARKVLKWKPK 249 >gi|323351727|ref|ZP_08087381.1| UDP-glucose 4-epimerase [Streptococcus sanguinis VMC66] gi|322122213|gb|EFX93939.1| UDP-glucose 4-epimerase [Streptococcus sanguinis VMC66] Length = 347 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +RS K DA+++FAA S V S++ ++ N G LLE + C Sbjct: 69 DKDFMRSVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMISLLE---VMQECGV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQRPINPYGESKLMMETIMRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTLDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G+ + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 336 >gi|308272760|emb|CBX29364.1| hypothetical protein N47_J03450 [uncultured Desulfobacterium sp.] Length = 307 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 26/283 (9%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F F ++D+ ++ + + + +FQPD I++ A+ S V F T+ + +F T Sbjct: 36 FDFEKIDLLQKDVVENIIFQFQPDYILHLASYSSV--------AFSWTHPVLSF--QNNT 85 Query: 112 RLWWSCLSQDKKDQF--RFLQISTDEVYGSL-DKGL-FSEDMPYNPSSPYSATKASSDYL 167 ++ + L +K R L I + E YG++ ++ L ED P P SPY+ + S + L Sbjct: 86 NIFLNLLDAVRKLNLSTRILSIGSSEEYGNVCEEDLPLKEDHPLKPISPYAVARVSQEML 145 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH------VFLYGDGQNVR 221 + YG+ V+++ N+ G Y ++P I ++++ + + GD VR Sbjct: 146 SKIYADGYGLNVIMTRSFNHIGTYQKDIFVVPSFIKQLVQIKNNGGKCSELVAGDISIVR 205 Query: 222 DWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D++ V D V A Y +L KG GE YN+ R +++ +I +L+ I + + + Sbjct: 206 DFIDVRDVVSAYYQLLNKGEKGEIYNVCSGQGRSLKEVISDITDILNIDISITIKNNLI- 264 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP ++ + KI + GW + +++ L + ++ Sbjct: 265 -----RPSDNKIIIGSNEKIVKKTGWNIKYSLDQSLKDIISYW 302 >gi|297154066|gb|ADI03778.1| GDP-mannose 4,6-dehydratase [Streptomyces bingchenggensis BCW-1] Length = 345 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 22/329 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L L V + N L+ ++ +F+ D+ D+ Sbjct: 6 LITGITGQDGSYLAEHL---LAQGYRVWGLIRGQANPRKLRISRLASDVTFVDGDLMDQA 62 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW----SCLS 119 + +AL QPD + N A S V S ++ N +G +LE R+ S Sbjct: 63 SLVAALDAVQPDEVYNLGAISFVPMSWQQSELVTEVNAMGVLRMLEAIRMVSGLDKSRGG 122 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + RF Q S+ E++G + + E ++P SPY A KA ++ + ++G+ Sbjct: 123 GGGRGGIRFYQASSSEMFGKVTETPQRETTIFHPRSPYGAAKAYGHFITRNYRESFGMYA 182 Query: 180 LLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYL 235 + N+ P F + I LA+ ++ G L+ G+ VRDW + D+VRA++L Sbjct: 183 VSGMLFNHESPRRGAEFVTRKISLAVAQIKLGLQDKLFLGNLDAVRDWGFAGDYVRAMHL 242 Query: 236 VLKKGRIGERYNIGG---NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 +L++ + Y +G ++ R + + FE + + I RP Sbjct: 243 MLQQDEPSD-YVVGTGRIHSVRDAVRMAFES-------VDLDWEDYVAIDPTLVRPAEVE 294 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTV 321 DS++ ++E+GW P + +N V Sbjct: 295 TLCADSARARTELGWEPTVDFRELMNMMV 323 >gi|294055379|ref|YP_003549037.1| UDP-glucose 4-epimerase [Coraliomargarita akajimensis DSM 45221] gi|293614712|gb|ADE54867.1| UDP-glucose 4-epimerase [Coraliomargarita akajimensis DSM 45221] Length = 329 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 49/329 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS R L V V+D L + K +S+ +F D+ Sbjct: 1 MNVLVVGGAGYIGSHCVRQLQQSGHNPV-VLDNLVFG----HRKAVSED--IAFYDCDLG 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + LK+ Q + +++FAA ++V S+ ++ N + T LLE + L Sbjct: 54 DCEAVAKILKDEQIELVMHFAAFAYVGESVTEPRKYYENNFVATLRLLE------TMLDN 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ ST +G + ED+P P +PY TK + + A+ + YG+ Sbjct: 108 GVK---KFVFSSTCATFGVPETLPLVEDLPQAPINPYGQTKLDVENCLKAFANAYGLSFA 164 Query: 181 LSNCSNNYGPY--------HFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G H PE LIPL I ++ ++G DG +RD++ Sbjct: 165 AFRYFNASGAAEDGSIGEDHNPETHLIPLVIDAATGRRDNIKIFGTDYPTPDGTCLRDYV 224 Query: 225 YVEDHVRALYLVLKK-GRIGER--YNIGG---NNERKNIDIVFEIGFLLDALIPKSYSHT 278 +V+D RA V K G YN+G N+ R+ I+ V E+ L ++ Sbjct: 225 HVDDLARAHIAVFDKLAEPGAEYFYNLGTGTPNSVREIINAVEEVTGLKVPVV------- 277 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 E +R D P YA DSSK + E+GW Sbjct: 278 EDVRRAGDPPA---LYA-DSSKAQEELGW 302 >gi|149372922|ref|ZP_01891919.1| NAD-dependent epimerase/dehydratase family protein [unidentified eubacterium SCB49] gi|149354415|gb|EDM42981.1| NAD-dependent epimerase/dehydratase family protein [unidentified eubacterium SCB49] Length = 326 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 29/328 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS + YL+ + +V V+D L G++++L E + F F++ DI + Sbjct: 16 FLITGGAGFIGSNIVGYLLKNNAKKVRVLDNLA-TGSMDNLAEHMEHPSFEFMKGDIRNI 74 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + A+++ D + + AA V RSI N+ G +L + Sbjct: 75 EDCKRAMQDI--DYVSHQAALGSVPRSINDPATSNDVNVGGFLNML--------IAQNES 124 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K + + ++ YG ED+ P SPY+ TK ++ + TYG L Sbjct: 125 KTVKKMVYAASSSTYGDSPSLPKVEDVIGKPLSPYAVTKLVNELYADVFYKTYGTKTLGM 184 Query: 183 NCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +GP P +IPL + +++ + GDG+ RD+ YVE+ V+A + Sbjct: 185 RYFNVFGPKQSPTGAYAAVIPLFMQALVDEKSPTMNGDGEQTRDFTYVENAVQANVRGML 244 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIR-FIEDRPGHDRRYA 295 G NNE I+I + L+ L K S EL + R G R Sbjct: 245 SGD-------EANNEV--INIAYGNRISLNTLWSDLKDVSGKELAAVYGPPRKGDVRDSL 295 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K K IG+ P+ ++ GL V W Sbjct: 296 ANIDKAKKLIGYDPKFSVAEGLK--VTW 321 >gi|116495481|ref|YP_807215.1| nucleoside-diphosphate-sugar epimerase [Lactobacillus casei ATCC 334] gi|116105631|gb|ABJ70773.1| Nucleoside-diphosphate-sugar epimerase [Lactobacillus casei ATCC 334] Length = 311 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 31/327 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDICDR 62 +VTGGAGFIGS L L+ D K V ++D L+ L+E I S+ +F + I D Sbjct: 5 LVTGGAGFIGSNLTELLLTDSKNTVTIVDDLSMG-----LRENIPDSDRVTFYEHSITDH 59 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + L + + D IV AA + V S+ T ++ +E L S L + Sbjct: 60 DFMSRLLIDGKFDYIVLLAAIASVADSV--------ERPYATHLVNQEANL--SMLETLR 109 Query: 123 KDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 Q F ++ S+ VYG +E M P + Y+ K +++ VL +G Y +PV Sbjct: 110 THQITFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPV 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG----SHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + N YGP P+ ++ M++ +GDG+ RD++YV D VRA+ Sbjct: 170 VCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRG 229 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L+ + N ++ +++ ++ L+ L K+ T + E R G R Sbjct: 230 LLETPSARDDVFNVANGQQTSLN---QVAKELEKLTGKTLHAT----YQEPRLGDIRDSY 282 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVC 322 K+ + + P + GL K V Sbjct: 283 AQVDKL-DQFDFMPHTPLAEGLAKYVA 308 >gi|86605202|ref|YP_473965.1| NAD-dependent epimerase/dehydratase family protein [Synechococcus sp. JA-3-3Ab] gi|86553744|gb|ABC98702.1| NAD-dependent epimerase/dehydratase family protein [Synechococcus sp. JA-3-3Ab] Length = 315 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 30/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG GFIGS L L+ + V+ +D Y G +L+ + + L D+ Sbjct: 1 MKILVTGGLGFIGSHLVSRLLQEGHT-VICLDN-GYTGREENLQAHRNNPALTLLWHDVA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + L++ + I + A + I T + GT+ LLE L+Q Sbjct: 59 --EPLPPELEKAGIEQIYHLACPASPPHYQADPIRTIRTGVWGTYHLLE--------LAQ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST EVYG ED P P + Y +K ++ L W + Sbjct: 109 --KTGARFLLASTSEVYGDPQVHPQPEDYWGHVNPIGPRACYDESKRLAETLTFDWQRQH 166 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + ++ N YGP + +++ I + + G+ + +YGDG R + Y+ D + L Sbjct: 167 QTEIRVARIFNTYGPAMREDDGRVVSNFIVQALRGNPLTVYGDGSQTRSFCYISDLIEGL 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G +N+G E +++ ++ L + P + + RP Sbjct: 227 VRLMNSPYPGP-FNLGNPQEVTILELARQVLALTGSSSPIVHRPLPTDDPKQRRP----- 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K ++ +GW PQ ++ GL T+ ++ Sbjct: 281 ---DINKARALLGWDPQIPLQLGLELTIPYF 308 >gi|307316687|ref|ZP_07596130.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] gi|306897885|gb|EFN28628.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] Length = 328 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 150/331 (45%), Gaps = 65/331 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L + I+ +V D LT GN ++++ F+Q DI D Sbjct: 5 RILVTGGAGYIGSHTAKLLRLE-GIEPVVYDNLT-TGNRSAVR------WGPFVQGDIMD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ +QPDA+++FAA ++V S+ ++ N+ GT LL+ R Q Sbjct: 57 GRHLIEVIEAYQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACR-------QT 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 D+ F S+ YG E P P +PY TK +++++ + + + + Sbjct: 110 GVDKVIF--SSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVS 167 Query: 181 ---LSNCS----NNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 + C + G +H PE LIP A+ H+ ++G DG VRD+++ Sbjct: 168 LRYFNACGADPEGDLGEWHDPETHLIPRALMAAAGRIPHLEIFGEDYDTPDGTCVRDYIH 227 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV A Y L KG GGN + +G + +S E++ Sbjct: 228 VADLASAHVLA-YRHLAKG--------GGN-------VALNLG------TGRGFSIKEVL 265 Query: 282 RFIEDRPGHD------RRYAIDSSKIKSEIG 306 R I + GHD RR A D + ++ G Sbjct: 266 RTIGEITGHDVPVVFRRRRAGDPPALYADAG 296 >gi|300113190|ref|YP_003759765.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] gi|299539127|gb|ADJ27444.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] Length = 336 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/347 (22%), Positives = 154/347 (44%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG+AL L+ +V+ +D L Y +L L + F+ + Sbjct: 1 MKIMVTGSAGFIGAALTEKLLKRGD-EVIGVDNLNDYYDVDLKRARLARFQNDSAFTEVP 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + +RE +++ ++QP +VN AA++ V S+ ++ +N+ G +LE R + Sbjct: 60 IGLENREALQAIFAKYQPQRVVNLAAQAGVRYSLENPYAYMDSNLYGFLNILENCRHY-- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + F S+ VYG+ K ++ +D +P S Y+A+K +++ + + H Y Sbjct: 118 -----QVEHLVF--ASSSSVYGANTKMPYAVQDNVDHPLSLYAASKKANELMAHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G++ RD+ Y++D V + Sbjct: 171 RLPTTGLRFFTVYGPWGRPDMALFKFTRNILAGKPIEIYNYGRHQRDFTYIDDIVEGVTR 230 Query: 236 VLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 L + G E YNIG + E+G + ++ + Sbjct: 231 TLDRLPTPNTNWNGATPEPNTSSAPYRIYNIGNHQP-------VELGKFIK-ILEECLGR 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +PG D + ++ + P +E G+ + V WY Sbjct: 283 EAKKNLLPLQPGDVPATYADVDDLIQDMEFHPATPIEEGIARFVAWY 329 >gi|254462740|ref|ZP_05076156.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium HTCC2083] gi|206679329|gb|EDZ43816.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium HTCC2083] Length = 327 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 53/351 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS C+ L I V NL++ E F + D+ DR Sbjct: 4 VLVAGGAGYIGSHACKALSKAGYIPVCY-------DNLSTGWE-EAVKFGPFERGDLLDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I L + +P AI++FAA S V S+ + TN++G+ L+E + + D Sbjct: 56 ARIDEVLAKHKPIAIMHFAALSQVGESMDDPGLYWRTNVMGSLNLIE------AAVEADI 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 K+ F+ ST YG D + E+ P + Y A+K + + ++ + YG+ Sbjct: 110 KN---FIFSSTCATYGDQDNVVLDENSVQQPINAYGASKRAVENILYDFERRYGLRHVIF 166 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 V ++ G YH PE LIPL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEYHQPETHLIPLMLD-AIDGKRDALTIFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 V D V A L LK G+ E +N+G GF + A++ S T + + Sbjct: 226 VCDLVDAHLLGLNWLKDGKQSEVFNLGTG-----------AGFSVRAVVDHSKDVTNKAV 274 Query: 282 RFIE--DRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNW 329 IE R G + S+K +SE+GW P + N+++ + W+ ++ Sbjct: 275 PIIERTRRAGDCTQLVSGSTKAESELGWTPVRSNLKAMIGDAWRWHQTGHY 325 >gi|124515820|gb|EAY57329.1| NAD-dependent epimerase/dehydratase [Leptospirillum rubarum] Length = 313 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 144/333 (43%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V GG GFIGS L ++ D ++ +D L+ G+ +K S+ + FL+ D+ Sbjct: 3 KMMVGGGCGFIGSNLIARIL-DGGVRATAVDNLS-TGHPQRIK----SDRYQFLKGDLSS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 RS +E +PD ++ A + + G + + F L R ++ Sbjct: 57 PRVARSVFQEVRPDCYIHVAGMAD---PLPGEKDPVQDIEKSVFPFLNILRSL-----EE 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 F+ +ST EV+G + L E P S Y + ++ + + +P + Sbjct: 109 SGGAGHFILVSTGEVFGGQNTPLPGEKETPLPDSSYGVSYLMMEHYLSVYAPRLKMPYSI 168 Query: 182 SNCSNNYGPYHFPEKLIPL------AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 S YGP E AI R +G L G+G +RD++YV+D V A+Y Sbjct: 169 VRLSPVYGPGQSLEGETGQMTFWIRAILRQDKGEIPRLTGNGMRIRDFIYVQDAVDAIYA 228 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTELIRFIEDRPGHD 291 + +G G +++G D+ ++ G +D SY++ R + G+ Sbjct: 229 LALEGNTGV-FHLGSGIASSERDVFAKMRQASGIPVDISYENSYNNGPQKRIL----GYQ 283 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R ++ E+GW P +E G+++TV W+ Sbjct: 284 R--------LEEELGWSPATTLEEGVSQTVSWF 308 >gi|268317410|ref|YP_003291129.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] gi|262334944|gb|ACY48741.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] Length = 318 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R ++TGGAGFIGS LC R+L +V+ +D G+ +++ + F F+ D+ Sbjct: 6 RTLITGGAGFIGSHLCERFLAEGH--EVICMDNFI-TGSPDNIAHLIGHERFHFIHHDVT 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L D +++FA+ + + + + +GT L Sbjct: 63 NFIYVEGPL-----DYVLHFASPASPVDYLKYPIQTLKVGALGT----------HKALGL 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K RFL ST EVYG ED P Y K ++ + +A+ + Sbjct: 108 AKAKGARFLLASTSEVYGDPLVHPQPEDYWGNVNPVGLRGVYDEAKRFAEAMTMAYHRYH 167 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V + N+YGP + + +P +T+ ++G + +YGDG R + Y++D V + Sbjct: 168 GVDVRIVRIFNSYGPRMRLDDGRALPTFMTQALKGEPITVYGDGSQTRSFQYIDDLVEGI 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 Y +L +G NIG E ++ EI I + S +E++ + P D + Sbjct: 228 YRLLMSDYVGP-VNIGNPEEISILEFAKEI-------IELTGSKSEIV--FKPLPADDPK 277 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + +GW P+ + GL +T+ ++ Sbjct: 278 VRQPDISLARRVLGWEPKVSRREGLRRTLEYF 309 >gi|167763678|ref|ZP_02435805.1| hypothetical protein BACSTE_02056 [Bacteroides stercoris ATCC 43183] gi|167698972|gb|EDS15551.1| hypothetical protein BACSTE_02056 [Bacteroides stercoris ATCC 43183] Length = 358 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 52/301 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + T+ I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAETDAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 RDW Y +D+V ++L+L K+ I R+ G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFKETGIELRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NE K ID + G +L + PK + RP + D +K K+ +GW PQ+ Sbjct: 285 NE-KGIDS--QTGKVLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWNPQQ 330 Query: 312 N 312 Sbjct: 331 T 331 >gi|158335517|ref|YP_001516689.1| dTDP-glucose 4-6-dehydratase [Acaryochloris marina MBIC11017] gi|158305758|gb|ABW27375.1| dTDP-glucose 4-6-dehydratase, putative [Acaryochloris marina MBIC11017] Length = 307 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ D +V+ +D N LK + N F ++ D+ Sbjct: 1 MRILVTGGAGFIGSHLIDRLMAD-DHEVICLDNFYTGRKHNVLKWLDNPN-FEIIRHDVT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D I + A + + I TN++GT I+ L Sbjct: 59 --EPIR-----LEVDQIYHLACPASPVHYQYNPVKTIKTNVMGTLIM----------LGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R L ST EVYG + +E+ P S Y K ++ L + Sbjct: 102 AKRIKARLLLASTSEVYGDPEVHPQTEEYRGNVNPIGIRSCYDEGKRVAETLAFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + ++ N YGP + +++ + + ++G + +YG G+ R + YV D V L Sbjct: 162 NVDIRVARIFNTYGPRMLEQDGRVVSNFVVQALKGIPLTVYGSGKQTRSFCYVSDLVDGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ IG N+G +E V E+ + +++ + E D P ++ Sbjct: 222 MRLMNGNSIGP-INLGNPDEYT----VLELAQTVQSMV-NPDAAIEYKPLPADDP---QQ 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K ++E+GW P ++ GL +T+ Sbjct: 273 RQPDITKARTELGWQPTIPLKDGLERTI 300 >gi|73970009|ref|XP_538439.2| PREDICTED: similar to UDP-glucuronate decarboxylase 1 [Canis familiaris] Length = 531 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ D +V V+D N I N F + D+ + Sbjct: 201 RILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHEN-FELINHDVVE 258 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + + TN IGT + L Sbjct: 259 PLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTL----------NMLGLA 301 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R L ST EVYG + SED P P + Y K ++ + A+ G Sbjct: 302 KRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 361 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++G + +YG G R + YV D V L Sbjct: 362 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL- 420 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E L+ L+ S S + + +D P ++ Sbjct: 421 VALMNSNVSSPVNLGNPEEH----TILEFAQLIKNLV-GSGSEIQFLSEAQDDP---QKR 472 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K K + W P +E GLNK + ++ Sbjct: 473 KPDIRKAKMMLAWEPVVPLEEGLNKAIHYF 502 >gi|322373261|ref|ZP_08047797.1| UDP-glucose 4-epimerase [Streptococcus sp. C150] gi|321278303|gb|EFX55372.1| UDP-glucose 4-epimerase [Streptococcus sp. C150] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDKAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDTLIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|228943408|ref|ZP_04105853.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976382|ref|ZP_04136847.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228783330|gb|EEM31444.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816268|gb|EEM62448.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 300 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 36/310 (11%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N + NL +Q DI D++ + K D + AA Sbjct: 4 KHEVWILDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLVAELFKNNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ CL D K F +ST VY DK Sbjct: 64 NVQDSIDDARSTFENDTIGTFNLLEQ------CLKYDVKMVF----MSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNE 253 + + I ++ + +YGDG+ RD LYVED V A Y G I G + Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIIN----AGTGQ 226 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +I+ + E LI + + + I + ++ + K K+ + W P+ ++ Sbjct: 227 DISINKLAE-------LISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKVSL 278 Query: 314 ESGLNKTVCW 323 E G+ KT W Sbjct: 279 EDGVIKTEEW 288 >gi|312139975|ref|YP_004007311.1| nad-dependent epimerase/dehydratase [Rhodococcus equi 103S] gi|325674551|ref|ZP_08154239.1| NAD-dependent epimerase/dehydratase [Rhodococcus equi ATCC 33707] gi|311889314|emb|CBH48630.1| putative NAD-dependent epimerase/dehydratase [Rhodococcus equi 103S] gi|325554811|gb|EGD24485.1| NAD-dependent epimerase/dehydratase [Rhodococcus equi ATCC 33707] Length = 335 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+G LC L + V+ +D + ++ ++S L + +V + D Sbjct: 11 RVLVTGGAGFLGLHLCTRL-SRRGDSVICLD------DFSTSAPWARSTLEALDRVTVID 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D +++ A + + T +GT +LE Sbjct: 64 GSVTDPPPLPRRIDLLIHLACPASPRDYQDDPVGTLATGGLGTLEMLERA---------- 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF+ ST EVYG +E P P S Y K + L A+ Y Sbjct: 114 EASGARFVLASTSEVYGDPQVHPQAESYRGNVDPVGPRSMYDEAKRFGEALASAFRRQYD 173 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N+YGP + +++P + ++ + + G+G+ R YV+D V A Sbjct: 174 TDTAIVRIFNSYGPGMRADDGRMVPAFVCAALDRRPLPVAGNGRQTRSLCYVDDTV-AGI 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGHDRR 293 L + R NIG ++E +D+ A + +H++ +RF+ P RR Sbjct: 233 LAMSDSRHPGPVNIGTDHEMSVLDV---------AAVVNRIAHSDAGVRFLPSAPDDPRR 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + +S +GW P+ +E G+ +TV W+ Sbjct: 284 RCPDVERARSLLGWRPRVTLEEGMRRTVDWF 314 >gi|170720577|ref|YP_001748265.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] gi|169758580|gb|ACA71896.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619] Length = 314 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 21/279 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ V V+D L+ G ++L +S NL ++ D+ D Sbjct: 11 ILITGGAGFIGSHLTDELLAK-GYAVRVLDNLS-TGKRSNLP-LSHPNL-QLIEGDVADA 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+K +V+ AA + V S+ +N IGT + E RL Sbjct: 67 ALVAHAVKGCA--GVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRLCGVK----- 119 Query: 123 KDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R + S+ VYG+ +G ED P P +PY++ K +S+Y + + +G+ ++ Sbjct: 120 ----RVVFASSAAVYGNNGEGASIDEDTPKAPLTPYASDKLASEYYMDFYRREHGLLPVV 175 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P +I + R +G + ++GDG+ RD+ +V D V+ L L Sbjct: 176 FRFFNIYGPRQDPSSPYSGVISIFAERAQKGLPITVFGDGEQTRDFFFVSDLVKLLVQGL 235 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 + G + E N+G N I+ + +L L SY Sbjct: 236 ESGPVAEGAINVGLNQATSLNQILAALAQVLGKLPEVSY 274 >gi|99077912|ref|YP_611171.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] gi|99034855|gb|ABF61909.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 42/343 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF---SFLQV--D 58 ++TG AGFIG L YL+ QV+ +D L+ ++ +LK + L +F+ V Sbjct: 5 LITGTAGFIGYHLATYLLAS-GWQVVGLDCLSPYYDI-ALKRRRHAMLEVNDNFIPVIGK 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L + +P+A+++ AA++ V SI +++ N+IGTF +LE R Sbjct: 63 LEDPGRLMGLLADHKPNAVIHLAAQAGVRHSIDAPRDYLEANLIGTFEVLEAAR------ 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYGI 177 + ST YG+ F E + S Y+ATK + + + ++ H YG+ Sbjct: 117 ---AHPPEHIMIASTSSAYGANTNIPFDEHQKADHQMSFYAATKKAGETMAHSYAHLYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 P + YGP+ P+ + T+ IE G + +Y G+ RD+ Y++D Sbjct: 174 PTTMFRFFTVYGPWGRPDMAL-FKFTKAIEAGEAIDVYNHGRMSRDFTYIDD-------- 224 Query: 237 LKKGRIGERYNIGGNNERKNIDI--------VFEIGF-----LLD--ALIPKSYSHTELI 281 L G G + G+ D + IG L+D A + + T Sbjct: 225 LVAGITGLIEAVPGDTPVSTQDTLSPVAPFRIVNIGASKPTPLMDYIAALETALETTARK 284 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +E +PG D++ + G+ PQ ++E G+ + V WY Sbjct: 285 NLMEMQPGDVPATWADTTLLSQLTGYEPQVSVEEGVARFVAWY 327 >gi|310827994|ref|YP_003960351.1| NAD dependent epimerase [Eubacterium limosum KIST612] gi|310828285|ref|YP_003960642.1| NAD dependent epimerase [Eubacterium limosum KIST612] gi|308739728|gb|ADO37388.1| NAD dependent epimerase [Eubacterium limosum KIST612] gi|308740019|gb|ADO37679.1| NAD dependent epimerase [Eubacterium limosum KIST612] Length = 324 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 27/329 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS LC L+ V +D L+ G +++ +++ F F++ DI D Sbjct: 13 KFLITGGAGFIGSNLCEALLKRGHF-VRCLDDLS-TGKAENIQPFLENSNFEFIKGDIRD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +A K D + + AA V RSI + NI GT +LE R Sbjct: 71 LDTCMNACKNI--DYVSHQAAWGSVPRSIEMPLVYEEINIKGTLNMLEAAR--------- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + +F+ S+ VYG E N SPY+ TK +++ + YG+ + Sbjct: 120 QNNVKKFVYASSSSVYGDEPTLPKKEGREGNLLSPYALTKRTNEEYARLYTELYGLETIG 179 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +G P+ +IP ++ ++ + GDG RD+ Y+E+ + A + Sbjct: 180 FRYFNVFGRRQDPDGAYAAVIPKFVSSLLYNIAPKINGDGTQSRDFTYIENVIEANLKGM 239 Query: 238 KKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + R GE +NI + ++ ++ LL I Y +R G + Sbjct: 240 QAPREAAGEAFNIAYGGQVNLNELYQKLSELLGKKIEPVYG--------PERAGDIKHSN 291 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D K + + + P+ + E G+ T+ WY Sbjct: 292 ADIDKARKFLKYAPEYSFERGIELTIAWY 320 >gi|163847530|ref|YP_001635574.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525379|ref|YP_002569850.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668819|gb|ABY35185.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222449258|gb|ACM53524.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 325 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 32/339 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ +TG G +GS L YL+ + + + + + ++ + + + DI Sbjct: 1 MRVFITGITGPVGSFLADYLLTIPGVDIHAFKR--WRSDPRPIEHLI--GRITIHEGDIE 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I A+ +PD I + AA+S+ S + N+ GT LLE R Sbjct: 57 DAFAIDRAIATARPDRIFHLAAQSYPSASWDAPILTMRANVEGTINLLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R T YG + D+ SED P P+SPY +K +++ L + +YG+ Sbjct: 109 RHVPKARIHIAGTSAEYGPVRPDEVPISEDHPLRPASPYGVSKVAAELSGLQYHASYGLH 168 Query: 179 VLLSNCSNNYGPYHFPEKLI-----PLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 V+++ N+ GP I +A+ + V G+ RD+ + D RAL Sbjct: 169 VVVTRSFNHVGPRQGDRCSIQTFCRQMALIEAGQQEPVMYVGNLSPKRDFTHTRDVARAL 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L+L+ G GE YN+ + DIV + + + L RP + Sbjct: 229 WLLLEHGTPGEVYNLCSGQAVRIGDIVDMVIAMGRVPVTVQVDPARL------RPVDEPI 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D+ K+++ GW P E G+ + V LD +WR Sbjct: 283 LQGDNRKLRAATGWQP----EIGIEQIVAEVLD---YWR 314 >gi|301301044|ref|ZP_07207204.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851314|gb|EFK79038.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 331 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 53/358 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS L+ + + +V+D L G+ ++ + ++ F Q DI Sbjct: 1 MATLVLGGAGYIGSHTVDRLIEKGE-KTIVVDSLV-TGHRQAVNKDAK-----FYQGDIA 53 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R KE DA+++FAA S V S+ ++ N G LLE ++ Sbjct: 54 DKDFMRQVFKENSDIDAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLE-------VMN 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 + D+ F ST YG L++ E P NP +PY +K + ++ YGI Sbjct: 107 EFSIDKIVFS--STAATYGILEEVPIKETTPQNPINPYGESKLMMEKIMRWADEAYGIKF 164 Query: 178 -PVLLSNCS-----NNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 P+ N + + G H PE L+P+ + M + + ++G DG N+RD+ Sbjct: 165 VPLRYFNVAGAKPDGSIGEDHMPETHLLPIVLQVAMGKRDKLQIFGDDYNTPDGTNIRDY 224 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D A L LK G +N+G + N +I L+A + ++ E+ Sbjct: 225 VHPLDLADAHILAVDYLKAGNPSTAFNLGSSTGFSNREI-------LEAA--RKVTNKEI 275 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I R G D + SS K + +GW PQ + + ++ W W L+ E Sbjct: 276 PAEIAPRRGGDPDVLVASSTKAREVLGWKPQFD-------DISKIIETAWKWHTLHPE 326 >gi|311695278|gb|ADP98151.1| dTDP-glucose 4-6-dehydratase [marine bacterium HP15] Length = 315 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 147/336 (43%), Gaps = 39/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGF+GS LC L+N+ VL +D + G ++ + + F ++ D+ Sbjct: 1 MRVLVTGGAGFLGSHLCERLLNEGH-DVLCVDNF-FTGRKRNIAHLMNNPYFEVMRHDV- 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D I N A + + T++ G + L Sbjct: 58 ------TFPLYVEVDQIYNLACPASPVHYQHDPVQTTKTSVHGAI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R Q ST EVYG + E P S Y K ++ L + + Sbjct: 102 AKRLGARIFQASTSEVYGDPEVHPQPESYWGKVNPIGIRSCYDEGKRCAETLFFDYYRQH 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 +P+ ++ N YGP P +++ + + ++G + +YG+GQ R + YV+D V Sbjct: 162 NLPIKVARIFNTYGPRMHPNDGRVVSNFVVQALKGEDITIYGEGQQTRSFCYVDDLVDGF 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 + L+ + N+G E F I L + +I + S +ELI +D P Sbjct: 222 VRLMNSREDFTGPVNLGNPGE-------FTIRELAERVIELTGSSSELIFKPLPQDDPKQ 274 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R+ I+ + ++E+GW P ++ GL KT+ ++ D Sbjct: 275 -RQPNIELA--RAELGWEPTIKLDDGLRKTITYFDD 307 >gi|170754466|ref|YP_001781648.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] gi|169119678|gb|ACA43514.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] Length = 307 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSNVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPGYLPIDEKHGIMPISYYGLSKYTAEEYIRLFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + +++ ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLLKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SSGG-KERFNIG-------TGVYTSVEELAENMIDIVGLKCN-IEYAPARKGDIANSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ ++++GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKNGLKKTIEYYKNN 304 >gi|196034702|ref|ZP_03102110.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus W] gi|195992745|gb|EDX56705.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus W] Length = 321 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 149/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVGR-GYNVTIVDNF-YKGKNKYHDELMKE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVFA----STSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I+ ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + G+ NIG NE+ ++ I L D S S + F E P Sbjct: 226 TIRAMDEKVNGKIINIGSENEKSIKEVAEVIKKLTD-----SSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR D +K+K + + + E GL +T+ W+ + + Sbjct: 281 EIPNRR--PDVTKLKDLVQFQAKVTWEDGLKETIKWFREED 319 >gi|77461901|ref|YP_351408.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1] gi|77385904|gb|ABA77417.1| putative NAD-dependent epimerase/dehydratase protein [Pseudomonas fluorescens Pf0-1] Length = 303 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 29/255 (11%) Query: 74 PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQIST 133 PDA+++ A ++ V + N++GT LL+ + + + FL +S+ Sbjct: 54 PDAVIHLAGQTFVPEAFRDPARTFDINLLGTLNLLQALKA--------RGFKGTFLYVSS 105 Query: 134 DEVYGSLDKGLF--SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPY 191 +VYG +++ +E P P +PY+ +K S+++L L WG + G PVL++ N+ G Sbjct: 106 GDVYGQVEEPALPITEQQPPCPRNPYAVSKLSAEFLSLQWGLSEGWPVLVARPFNHIGTG 165 Query: 192 HFPEKLIPLA---ITRMIEGSHV--FLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERY 246 +I A I R+ +G GD RD+L V D V A + +L+KG G+ Y Sbjct: 166 QKDSFVIASAARQINRIKQGLQAPQLEVGDIDVTRDFLDVGDVVSAYFALLEKGTPGQVY 225 Query: 247 NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRRYAIDSSKIK 302 NI +E+ ++ ++G L ++ ++D R RR ++ Sbjct: 226 NICSGHEQSIRSLIEQMGDLAQV----------KLQLVQDPARMRRADQRRVCGSHQRLA 275 Query: 303 SEIGWFPQENMESGL 317 GW PQ + L Sbjct: 276 RTTGWTPQITTQQSL 290 >gi|325958481|ref|YP_004289947.1| UDP-glucuronate decarboxylase [Methanobacterium sp. AL-21] gi|325329913|gb|ADZ08975.1| UDP-glucuronate decarboxylase [Methanobacterium sp. AL-21] Length = 313 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 53/339 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +I+TG AGF+GS L VN V+ ID G++ ++ + + F F++ DI Sbjct: 2 VTVIITGVAGFVGSHLADKFVNK-GFHVIGIDNF-LTGSIENISSLLDKDNFEFIEHDI- 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I+ + + D I++FA + + + E + + IGT+ LE +R Sbjct: 59 ----IKPIKLDEKIDIILHFACPASPEDYLQYPLETLRVDSIGTYNTLEMSR-------- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS--------------SPYSATKASSDY 166 ++ R++ ST E+YG D NP S Y +K S+ Sbjct: 107 --ENNARYIFASTSEIYG---------DPLVNPQPETYWGNVHSTGLRSVYDESKRFSEA 155 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 L +A+ Y + V + N YGP +++P I++ ++ + +YG+G R + Sbjct: 156 LSMAYYREYCLDVRIVRIFNTYGPRMKLNDGRVVPNFISQALKNEDLTVYGEGTQTRSFC 215 Query: 225 YVEDHVRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 YV+D V ++ + + G N+G +E K +D +I K+ S++++ Sbjct: 216 YVKDLVEGIFKISNTDNLNGNIMNLGNPDEYKILDFA-------KIIINKTNSNSKIT-- 266 Query: 284 IEDRPGHDRRYAI-DSSKIKSEIGWFPQENMESGLNKTV 321 +D P D + D SK++S I W PQ ++++GL +T+ Sbjct: 267 FKDLPEDDPKLRCPDISKVQSLIEWKPQTSLDNGLQETI 305 >gi|323717252|gb|EGB26460.1| GDP-mannose 4,6-dehydratase gca [Mycobacterium tuberculosis CDC1551A] Length = 316 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 45/339 (13%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDICDRE 63 +TG G +GS L L L YA I S+L F+ +VDI D Sbjct: 3 ITGAGGMMGSHLAEML--------LAAGHDVYATYCR--PTIDPSDLQFNGAEVDITDWC 52 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + ++ F+PDA+ + AA+S+ S E +TTN++GT I+ E R + Sbjct: 53 SVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR--------RVR 104 Query: 124 DQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + + YG +D +E P PY +KA++D L + +YG+ ++ Sbjct: 105 PHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVV 164 Query: 182 SNCSNNYGPYHFPEKLIPLA-----ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N GP + L + E S + + G+ + R + V D RAL L+ Sbjct: 165 ARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRALMLM 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED---RPGHDRR 293 L KG G YN+GG+ I +E+G +L +I + +++ ++ RP ++ Sbjct: 224 LDKGEAGADYNVGGS-------IAYEMGDVLKQVI-AACKRDDIVPEVDPALLRPTDEKI 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 D SK+ + GW E L +T+ D +WR Sbjct: 276 IYGDCSKLAAITGW----QQEICLTQTIADMFD---YWR 307 >gi|167043216|gb|ABZ07924.1| putative NAD dependent epimerase/dehydratase family protein [uncultured marine microorganism HF4000_ANIW141K23] Length = 300 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 27/312 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M VTGGAGF+GS L + LV + ++ VID L + G +L + N F ++DI Sbjct: 1 MHFAVTGGAGFVGSHLVKLLVEEGH-EITVIDNL-HKGKKENLTSVI--NKIKFQKMDIQ 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R LK D + + AA + V S +E+ N+ GT + Sbjct: 57 DYESMRKILKNV--DGVFHQAALTVVQDSFTRPEEYFDVNVHGT----------ENIFKL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++F+ + S+ VYG + +ED NP SPY TK +++L + ++ Sbjct: 105 ANENKFKVVYASSSSVYGHKLETPITEDAERNPISPYGKTKLEAEHLAEKYS-KLNTEII 163 Query: 181 LSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N +G + +I + R+ EG ++G G +RD+++V D +A + + Sbjct: 164 GLRYFNIFGKGQTLDYAGVITKFLERINEGKAPIVFGKGSQIRDFIHVNDVAKANLMAMN 223 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 NI N V I L D +I S E I F+E G + D Sbjct: 224 SNCSNLIVNIATGN-------VTSILELADMMINASGLKLEPI-FVEALEGDIEKSHADI 275 Query: 299 SKIKSEIGWFPQ 310 S+ K W P+ Sbjct: 276 SQAKKYFNWEPK 287 >gi|84488897|ref|YP_447129.1| putative UDP-glucose 4-epimerase [Methanosphaera stadtmanae DSM 3091] gi|84372216|gb|ABC56486.1| putative UDP-glucose 4-epimerase [Methanosphaera stadtmanae DSM 3091] Length = 315 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 150/339 (44%), Gaps = 45/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R +VTGGAGFIGS + L+ + +V +ID +T GN+ +LK + D Sbjct: 4 LRCVVTGGAGFIGSHITETLLENNVSKVTIIDNMT-TGNIENLKNLDH---------DRI 53 Query: 61 DRECIRSALKEFQP-----DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + C + +P D + + AA V SI TNI G+F +L+ + Sbjct: 54 ELVCGDIRTLDMKPILENHDYLFHEAALISVFESIEQPKATNKTNIDGSFNVLQAA--YE 111 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S + + + S+ VYG + E +P P SPY+ +KA + + TY Sbjct: 112 SNIK-------KVISASSAAVYGETEVLPNVETLPLQPLSPYAVSKALLELYSYTFTQTY 164 Query: 176 GIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +P N +GP + +IP I+ ++ +YGDG+ RD++YV++ + Sbjct: 165 HLPTACLRYFNVFGPRQKADSPYSGVIPKFISALLNNETPVIYGDGEQTRDFIYVKNIAK 224 Query: 232 ALYLVLKKGRIGERYNIG-GNNERKN--IDIVFEI-GFLLDALIPKSYSHTELIRFIEDR 287 A Y V G +NI G N ++I+ EI G+ + +++ + Sbjct: 225 ANYEVAINDVTG-VFNIAHGKTTTINELLEIICEIMGYDCNP------------KYLPQK 271 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 G R D SK + G+ + + + L +T+ +Y++ Sbjct: 272 DGDIRDSVADISKAEETFGFKSEHDFKKELKETINYYVN 310 >gi|297582745|ref|YP_003698525.1| UDP-glucose 4-epimerase [Bacillus selenitireducens MLS10] gi|297141202|gb|ADH97959.1| UDP-glucose 4-epimerase [Bacillus selenitireducens MLS10] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 53/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ + QV+V+D NL + + + F Q D+ Sbjct: 1 MAVLVCGGAGYIGSHAVADLLASGE-QVVVVD------NLQTGHRGAVDDGAVFYQADLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++++FAA+S V S+ + N+ G LL++ + Sbjct: 54 DEEALERVFNSHNIESVMHFAADSLVGVSMNEPLAYYDNNVYGALCLLKKMK-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-------------YL 167 K R + ST YG D+ +E+M NP++PY TK + + Y+ Sbjct: 106 -KHGVKRIVFSSTAATYGEPDEVPITEEMATNPTNPYGETKLAIERMMKWADEAHEIRYV 164 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQN 219 VL + + G ++ + G H PE LIP+ + + + + ++G DG Sbjct: 165 VLRYFNVAG-----AHPEKDIGEDHRPETHLIPIILQVALGQREKIMVFGDDYDTPDGTC 219 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +RD+++V D ++A L L+KG + +N+G + +++ + + IP+ + Sbjct: 220 IRDYIHVTDLIQAHILALRYLRKGGTSDVFNLGNGSGFSVQEVIDTVETVTGKTIPRELA 279 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G + S K K +GW P+ Sbjct: 280 --------PRRAGDPAQLIASSGKAKQVLGWAPE 305 >gi|332360353|gb|EGJ38165.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK49] Length = 342 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 46/349 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 55 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++Y D A L L+ G+ + +N+G + N+ IV K H Sbjct: 225 YVYPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 + E RPG S K ++ +GW P+ +N+E+ + W+ + Sbjct: 277 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWHFSH 325 >gi|269926816|ref|YP_003323439.1| GDP-mannose 4,6-dehydratase [Thermobaculum terrenum ATCC BAA-798] gi|269790476|gb|ACZ42617.1| GDP-mannose 4,6-dehydratase [Thermobaculum terrenum ATCC BAA-798] Length = 330 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 20/315 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ +V+ + + T N +K I + D+ D+ Sbjct: 5 LITGITGQDGSYLAEFLLEK-GYRVVGMVRRTSLENFGRIKHIQDD--IEIVTGDLLDQL 61 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + +KE++P+ + N AA+S V S + + G F L TR+ + D Sbjct: 62 SLIDIIKEYKPNEVYNLAAQSFVPTS------WTQPVLTGEFTALGVTRMLEAIRLVDPS 115 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 RF Q S+ E++G + + E P+ P SPY K Y+ + + +YGI Sbjct: 116 --IRFYQASSSEMFGKVRETPQKETTPFYPRSPYGVAKVYGHYITVNYRESYGIFACSGI 173 Query: 184 CSNNYGP---YHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALYLVLKK 239 C N+ P F + + + R+ G L G+ RDW Y D+VRA++L+L++ Sbjct: 174 CFNHESPRRGLEFVTRKVSYGVARIKHGLQKELRLGNLDAKRDWGYTGDYVRAMWLMLQQ 233 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 + Y I E ++ + E+ F L + Y + F R DS+ Sbjct: 234 D-TPDDYVI-ATGETHSVRELVELAFSHVGLDYRDYVVVDPKYF---RAAEVDLLVGDST 288 Query: 300 KIKSEIGWFPQENME 314 K + ++GW P E Sbjct: 289 KARQKLGWQPTVKFE 303 >gi|254393719|ref|ZP_05008841.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294816056|ref|ZP_06774699.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|326444398|ref|ZP_08219132.1| putative UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|197707328|gb|EDY53140.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294328655|gb|EFG10298.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 331 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 57/332 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++TGGAG+IG+ + + + V+V+D L+ AG L + ++ Sbjct: 1 MTWLITGGAGYIGAHVAHAMTQAGE-AVVVLDDLSSGVAGRLPAG--------VPLVRGG 51 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR + L E + +V+ AA V S+ + N+ G +LLE + + Sbjct: 52 IGDRPALDRVLAEHRITGVVHLAARKQVGESVAQPLRYYRENVHGLTVLLE------AVV 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D + F+ S+ VYG D+ L +E P P +PY TK + ++LV A G +G+ Sbjct: 106 AADVRT---FVFSSSAAVYGVPDQTLIAESAPCAPINPYGETKLAGEWLVRATGRAHGLA 162 Query: 179 VLLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLY 225 N G PE +IP+ R+ G ++G DG +RD+++ Sbjct: 163 TACLRYFNVAGAAR-PELADTGVFNIIPMFFDRITRGEEPRIFGDDYPTPDGTCIRDYIH 221 Query: 226 VEDHVRALYLVLKKGRIGER-----YNIG---GNNERKNIDIVFEI-GFLLDALI-PKSY 275 V D A V ++ GER NIG G + R+ +V E+ G L ++ P+ Sbjct: 222 VADLADAHLAVARRLADGERPGDLTVNIGRGEGVSVRELASLVGEVTGVPLKPVVEPR-- 279 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 RPG R I E+GW Sbjct: 280 -----------RPGDAARAVASVELIARELGW 300 >gi|126463065|ref|YP_001044179.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] gi|126104729|gb|ABN77407.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] Length = 328 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 146/334 (43%), Gaps = 56/334 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDIC 60 R++VTGGAG+IGS C+ L + + D L+ Q+ F L D+ Sbjct: 4 RVLVTGGAGYIGSHACKVL-KRAGFEPVTFDNLSTG--------WEQAVKFGPLAHGDLM 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I +AL+ ++P A+++FAA S V S+ + N+ G LLE T ++ Sbjct: 55 DRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEAT------VAA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 K+ F+ ST YG D + ED P P + Y A+K + + +V +G +G+ Sbjct: 109 GVKN---FVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHT 165 Query: 178 -----PVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 V ++ G H PE LIPL + + G L +G DG +RD+ Sbjct: 166 IFRYFNVAGADPEGEVGEQHDPETHLIPLMLD-AVAGRRPALTVFGTDYPTRDGTCIRDY 224 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTE 279 ++V D +A L L R GG N VF + GF + +I +S + T Sbjct: 225 VHVMDLAQAHVLGLN------RLLDGGPNR------VFCLGTGRGFSVREVIEQSRAVTN 272 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I F E R G S + E+GW P+ Sbjct: 273 REVPILFGERRSGDAAALVCGSERAVRELGWEPE 306 >gi|116623720|ref|YP_825876.1| GDP-mannose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116226882|gb|ABJ85591.1| GDP-mannose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 342 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 34/336 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYA-GNLNSLKEISQSNLFSFL--QV 57 + ++TG G GS L +L+ ++ LV T+ G L L + L Sbjct: 3 KALITGITGQDGSFLAEFLLEKGYEVHGLVRRSSTFTTGRLEHLYIDPHTPHARLLLHYG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D IR L++ QPD + N AA+SHV S A+ +G +LE R Sbjct: 63 DLSDGGGIRRLLEQIQPDEVYNLAAQSHVRVSFDQAEFTADVVGLGALRILEAVR----N 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + RF Q + E++G+ +E P+ P SPY+A+K ++ + + + +YG+ Sbjct: 119 AAEAGNNPIRFYQAGSSEMFGAAAPPQ-NEATPFYPRSPYAASKVAAHWYAINYRESYGL 177 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G F + I A+TR+ G LY G+ RDW + D+VRA Sbjct: 178 FIANGILFNHESERRGET-FVTRKITRALTRIHLGLQDKLYLGNLDARRDWGHAADYVRA 236 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 ++L+L++ R GE Y++ ER + + +++ P+ TE + F++ Sbjct: 237 MWLMLQQDRPDDYVIATGESYSVREFLERAAAHLGMDWQKVVEQ-DPRYLRPTE-VDFLK 294 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 P SK + ++GW P+ + + + V Sbjct: 295 GDP----------SKAREQLGWKPEVTFDQLVKRMV 320 >gi|328470674|gb|EGF41585.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus 10329] Length = 338 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/353 (26%), Positives = 152/353 (43%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + +F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLERIEKVCGVKPTFIEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + ALK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKAALVEALKAHNIEAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P I+++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-ISQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV AL V K + YN+G N +++V +P Sbjct: 228 GVRDYIHVMDLSDGHVAALEKVGSKAGL-HIYNLGTGNGYSVLEMVKAFESACGKNVP-- 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D SK +E+GW +E T W +N Sbjct: 285 ------YQLVERRPGDIAECWADPSKAMNELGWKASRTLEEMTGDTWRWQSNN 331 >gi|145361853|ref|NP_850694.2| UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); UDP-glucuronate decarboxylase/ catalytic [Arabidopsis thaliana] gi|17473549|gb|AAL38251.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana] gi|28058970|gb|AAO29973.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana] gi|332645579|gb|AEE79100.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana] Length = 435 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 35/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGF+GS L L+ +V+VID + G +L +LFS + ++ Sbjct: 120 LRIVVTGGAGFVGSHLVDKLIGRGD-EVIVIDNF-FTGRKENL-----VHLFSNPRFELI 172 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L E D I + A + + I TN++GT + L Sbjct: 173 RHDVVEPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTL----------NMLGL 220 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ RFL ST EVYG + E P S Y K +++ L + + Sbjct: 221 AKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA 280 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ + + I + +YGDG+ R + YV D V L Sbjct: 281 GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGL 340 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ +G +N+G E +++ + ++D + I F + + Sbjct: 341 VALMENDHVGP-FNLGNPGEFTMLELAEVVKEVIDP--------SATIEFKPNTADDPHK 391 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK K ++ W P+ ++ GL + V + Sbjct: 392 RKPDISKAKEQLNWEPKISLREGLPRMVSDF 422 >gi|15802514|ref|NP_288540.1| GDP-mannose dehydratase [Escherichia coli O157:H7 EDL933] gi|15832093|ref|NP_310866.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. Sakai] gi|168751637|ref|ZP_02776659.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|168757578|ref|ZP_02782585.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|168761776|ref|ZP_02786783.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|168769787|ref|ZP_02794794.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|168775517|ref|ZP_02800524.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|168782318|ref|ZP_02807325.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|168788703|ref|ZP_02813710.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|168799084|ref|ZP_02824091.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|195938227|ref|ZP_03083609.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. EC4024] gi|208807127|ref|ZP_03249464.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208817125|ref|ZP_03258217.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|209400350|ref|YP_002271276.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|217329572|ref|ZP_03445651.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254793818|ref|YP_003078655.1| GDP-mannose dehydratase [Escherichia coli O157:H7 str. TW14359] gi|261225120|ref|ZP_05939401.1| GDP-mannose dehydratase [Escherichia coli O157:H7 str. FRIK2000] gi|261257535|ref|ZP_05950068.1| GDP-mannose dehydratase [Escherichia coli O157:H7 str. FRIK966] gi|12516222|gb|AAG57094.1|AE005429_5 GDP-mannose dehydratase [Escherichia coli O157:H7 str. EDL933] gi|3435177|gb|AAC32345.1| GDP-D-mannose dehydratase Gmd [Escherichia coli] gi|4867921|dbj|BAA77730.1| GDP-mannose 4,6-dehydratase [Escherichia coli] gi|13362307|dbj|BAB36262.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. Sakai] gi|68271021|gb|AAY89030.1| Gmd [Escherichia fergusonii] gi|187769002|gb|EDU32846.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|188014344|gb|EDU52466.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|189000082|gb|EDU69068.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|189355458|gb|EDU73877.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|189361244|gb|EDU79663.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|189367746|gb|EDU86162.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|189371537|gb|EDU89953.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|189378445|gb|EDU96861.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|208726928|gb|EDZ76529.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208730744|gb|EDZ79434.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|209161750|gb|ACI39183.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|217317340|gb|EEC25769.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254593218|gb|ACT72579.1| GDP-mannose dehydratase [Escherichia coli O157:H7 str. TW14359] gi|320191800|gb|EFW66448.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC1212] gi|323187755|gb|EFZ73055.1| GDP-mannose 4,6-dehydratase [Escherichia coli RN587/1] gi|326338390|gb|EGD62218.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. 1044] gi|326347087|gb|EGD70820.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. 1125] Length = 372 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNL-FSFLQVD 58 ++TG G GS L +L+ D +V I + + N + I Q SN F D Sbjct: 6 LITGVTGQDGSYLAEFLL-DKGYEVHGIKRRASSFNTERIDHIYQDPHGSNPNFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N AA SHV S + + IGT LLE R Sbjct: 65 LTDSSNLTRILKEVQPDEVYNLAAMSHVAVSFESPEYTADVDAIGTLRLLEAIRFL---- 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 --GLENKTRFYQASTSELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I + + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRGLANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 L+L++ Sbjct: 239 LMLQQ 243 >gi|89073285|ref|ZP_01159815.1| polysaccharide biosynthesis protein [Photobacterium sp. SKA34] gi|89050995|gb|EAR56459.1| polysaccharide biosynthesis protein [Photobacterium sp. SKA34] Length = 340 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 28/333 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-YAGNLNSLKEIS---QSNLFSFLQVDI 59 ++TG AGFIGS L L+ + V + + T + NL+ +K + Q + F+F++ DI Sbjct: 19 LITGVAGFIGSNLLEKLLKLNQTVVGLDNFATGHQHNLDEVKSLVTELQWDRFTFIEGDI 78 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI-IGTFILLEETRLWWSCL 118 D + + A+K+ D +++ AA V RSI D T ++ IG F+ + L Sbjct: 79 RDYKTCQLAVKDV--DYVLHEAALGSVPRSI--NDPLTTDSVNIGGFL---------NML 125 Query: 119 SQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K++Q + F ++ YG E+ NP SPY+ TK ++ + TYG Sbjct: 126 TASKEEQVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYAGVFARTYGF 185 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +G P +IP + MI VF+ GDG+ RD+ ++E+ V+ Sbjct: 186 KTIGLRYFNVFGKRQEPNGAYAAVIPKWTSAMINNEEVFINGDGETSRDFCFIENTVQMN 245 Query: 234 YLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + YN+ + D+ I AL + SHT + + R G Sbjct: 246 ILAATASEEAKDSVYNVAVGDRTTLNDLYRSI---QSALAENNISHTIEPTYRDFRAGDV 302 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K +++G+ P+ + +G++K + WY Sbjct: 303 RHSQADITKATNQLGYQPEYRIFAGISKAMPWY 335 >gi|254225668|ref|ZP_04919275.1| Nucleoside-diphosphate-sugar epimerases [Vibrio cholerae V51] gi|125621788|gb|EAZ50115.1| Nucleoside-diphosphate-sugar epimerases [Vibrio cholerae V51] Length = 334 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSN-LFSFLQV 57 M+ +VTG AGFIGSA + L V+ ID + Y NL + N LF FL+V Sbjct: 1 MKYLVTGAAGFIGSATVKKLTEQGH-HVVGIDNINDYYDVNLKHARLARIENPLFHFLKV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + ++ + + +++ AA++ V S+ + +N++G +LE R Sbjct: 60 DIADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q+K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 115 --QNKVGHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I G + + G RD+ +V+D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILAGEAIDINNHGDMWRDFTHVDDIVEGVVR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + ++ V I L K++ Sbjct: 230 IADVLPTRNAAWTVESGTPATSSAPYAIYNIGHGSPINLMEFVKAIEEQLGIEANKNFRG 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + PG + D++ + + G+ P+ + G+++ + WY D Sbjct: 290 MQ--------PGDVYQTYADTADLFAATGYKPKVGVREGVSEFIAWYRD 330 >gi|332360899|gb|EGJ38704.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK355] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 151/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +RS K DA+++FAA S V S++ ++ N G LLE + C Sbjct: 55 DKDFMRSVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 225 YVHPFDLADAHILAVEHLRAGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 322 >gi|260788448|ref|XP_002589262.1| hypothetical protein BRAFLDRAFT_213068 [Branchiostoma floridae] gi|229274437|gb|EEN45273.1| hypothetical protein BRAFLDRAFT_213068 [Branchiostoma floridae] Length = 365 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 32/342 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-------FSFLQ 56 +VTG G GS L +L+N I +I + + N ++ + + + F Sbjct: 19 LVTGVNGQDGSYLAEFLMNKGYIVHGIIRRAS-TFNTGRIEHLYSNPMIHKEGENFHLHY 77 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D C+ + E QPD I N AA+SHV S A+ + +G +L+ R + Sbjct: 78 GDMTDSTCLTKIISEVQPDEIYNLAAQSHVKVSFSLAEYTADVDGVGVLRMLDAIRA--T 135 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 LS+ + +F Q ST E++G + + E P+ P SPY A K + ++V+ + Y Sbjct: 136 GLSK----KIKFYQASTSEMFGLVQEVPQKETTPFYPRSPYGAAKLYAYWIVVNYREAYN 191 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHV-FLYGDGQNVRDWLYVEDHVRA 232 + N+ P F + I + +++ G + G+ RDW + +D+VRA Sbjct: 192 MFACNGILFNHESPRRGETFVTRKITRGVAKILLGIQTEVVLGNLDAQRDWGHAKDYVRA 251 Query: 233 LYLVLKKGR-------IGERYNIG----GNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++L+L+ + G Y++ + + +DI++E G L+ + S + T + Sbjct: 252 MWLMLQCEKPEDFVISTGTVYSVREFVMASFKHIGVDIIWE-GKGLEEVGKDSSTGTVRV 310 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + RP DS+K K+ +GW P + E + + V Sbjct: 311 RVSQKYYRPAEVEFLQGDSTKAKNVLGWEPYVSFEELVAEMV 352 >gi|188586200|ref|YP_001917745.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350887|gb|ACB85157.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 321 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 33/339 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTG AGFIGS LC+ LV +V +D L+ G + L+E+ F F+ I Sbjct: 1 MKYLVTGAAGFIGSHLCKELVTRGN-KVWGLDNLS-QGKIERLQELEDHPDFQFIDSCIS 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + + D I + AA V R + + I N+ T +RL+ Sbjct: 59 DDEVLEELINKV--DIIYHMAAVVGVKRYVEKPERVIDVNVRFT------SRLFELAYQL 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED--MPYNPSS----PYSATKASSDYLVLAWGHT 174 DKK F ST EVYG + FSED Y PS+ Y+ +K+++++L L + Sbjct: 111 DKKVIF----ASTSEVYGKNNSIPFSEDDNRIYGPSTTDRWSYAISKSAAEHLCLGYVKK 166 Query: 175 YGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ ++ N YGPY ++ + +++ + ++ DG R + Y++D ++ Sbjct: 167 -GLKAVIIRYFNVYGPYADTSAYGGVVTRFVNQLLTNKPMTVHNDGSQTRCFTYIDDIIK 225 Query: 232 ALYLVLKKGRI-GERYNIGGNNERKNIDI---VFEIGFLLDALIPKSYSHTELIRFIEDR 287 + G+ +N+G + E +++ + ++ + ++ + Y F + Sbjct: 226 GTIEAGSRPEAEGKVFNLGHHRETSILELAETILKVSGINGDIVFQPYKE-----FYGNS 280 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D S+ + + + P+ +E GL KT+ WY D Sbjct: 281 YEDITRRVPDLSEARKILDYDPEITLEDGLKKTLNWYKD 319 >gi|52001496|gb|AAU21550.1| GalE [Streptococcus thermophilus] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDKAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEK- 280 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 ++ RPG S K ++ +GW PQ +N+E + W+ Sbjct: 281 -------VDRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|332361411|gb|EGJ39215.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1056] Length = 347 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+VID L G+ ++ + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVIDNLV-TGHRAAIHPKA-----VFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+L ++ N G LLE + C Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMLDPLKYFDNNTAGMVSLLE---VMQECGV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMIETIIRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRAGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 336 >gi|28900734|ref|NP_800389.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|153838095|ref|ZP_01990762.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ3810] gi|260362633|ref|ZP_05775540.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus K5030] gi|260877672|ref|ZP_05890027.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AN-5034] gi|260897185|ref|ZP_05905681.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus Peru-466] gi|28809180|dbj|BAC62222.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|149748481|gb|EDM59340.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ3810] gi|308088214|gb|EFO37909.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus Peru-466] gi|308090765|gb|EFO40460.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AN-5034] gi|308112783|gb|EFO50323.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus K5030] Length = 338 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 153/355 (43%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + +F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLERIEKVRGVKPTFIEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + ALK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKAALVEALKVHNIEAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + S+ VYG +ED P + ++PY + KA+ D+ Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ + G P P L+P I+++ G FL +G D Sbjct: 170 SITLL--RYFNPV-GSHPTGELGEDPQGIPNNLMPF-ISQVAVGRREFLSVFGSDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D HV AL V K + YN+G N +++V +P Sbjct: 226 GTGVRDYIHVMDLSDGHVAALEKVGSKAGL-HIYNLGTGNGYSVLEMVKAFESACGKNVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D SK +E+GW +E T W +N Sbjct: 285 --------YQLVERRPGDIAECWADPSKAMNELGWKASRTLEEMTGDTWRWQSNN 331 >gi|117922520|ref|YP_871712.1| NAD-dependent epimerase/dehydratase [Shewanella sp. ANA-3] gi|117614852|gb|ABK50306.1| NAD-dependent epimerase/dehydratase [Shewanella sp. ANA-3] Length = 335 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 147/339 (43%), Gaps = 25/339 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+ + L +V+ ID L L L + + F F++ Sbjct: 1 MKYLVTGAAGFIGAKVSERLCAQGH-EVVGIDNLNDYYDVGLKLARLAPLEALSNFRFIK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DR+ I + E +++ AA++ V S+ + +N++G +LE R Sbjct: 60 LDLADRDGIATLFAEQGFRRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 K + + S+ VYG K FS ED +P S Y+ATK +++ + + H Y Sbjct: 116 ---HHKIEHLVY--ASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++ G + +Y G RD+ Y++D V + Sbjct: 171 QLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGDIIDVYNHGDLSRDFTYIDDIVEGIIR 230 Query: 236 VLKKGRIGE---RYNIGGNNERKNIDIVFEIG-----FLLDAL--IPKSYSHTELIRFIE 285 V K R G VF IG LLD + + + +F+ Sbjct: 231 VQDKPPRPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALESALGIEANKQFLP 290 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG D+ + +G+ PQ ++ +G+ + V WY Sbjct: 291 MQPGDVHSTWADTEDLFKAVGYKPQVDINTGVGRFVEWY 329 >gi|326938226|gb|AEA14122.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar chinensis CT-43] Length = 321 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 148/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TGGAGFIGS L LV +V ++D Y G E+ + + + + D Sbjct: 4 KCLITGGAGFIGSHLAEELVRR-GYEVTIVDNF-YKGKNKYHNELMRE--IRVIPISVLD 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + Q D + + AA V ++ + E I TN GT +L+ + L Sbjct: 60 KNSMYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQ------AALKGK 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSSP----YSATKASSDYLVLAWGHTY 175 KK F ST EVYG K FSE D Y +S Y+ K + L L + Sbjct: 112 KKVVF----ASTSEVYGK-GKPPFSEEGDRLYGATSKIRWSYAVCKTLEETLCLGYA-LE 165 Query: 176 GIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+PV + N YGP +IP I ++G + +YGDG+ R + YV D V A Sbjct: 166 GLPVTIVRYFNIYGPRAKDGPYAGVIPRFIRAALQGEDILVYGDGKQTRCFTYVSDAVEA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH-- 290 + + GE NIG NE+ ++ I L KS S + F E P Sbjct: 226 TIRAMDEKVNGEIINIGSENEQSIKEVAETIKKLT-----KSSSKIVQVPFEEVYPHGFE 280 Query: 291 ---DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +RR + +K++ + + E GL +T+ W+ + N Sbjct: 281 EIPNRRPNV--TKLRELVQFQATVTWEQGLKETIKWFREEN 319 >gi|157150607|ref|YP_001450301.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] gi|157075401|gb|ABV10084.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] Length = 339 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 152/335 (45%), Gaps = 48/335 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG+IG+ L+ +++V+D + + +L ++++I + +F +VDI Sbjct: 4 KILVTGGAGYIGTHTVVELIKAGH-EIVVVDNFSNSSKKSLEAVEKIVGQTI-TFYEVDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD+E + K+F+P +++FA V S + N+ GT LL Sbjct: 62 CDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLR---------V 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYG 176 ++ + + S+ VYG E+ P + ++PY TK + + + T+ Sbjct: 113 MEEVNCKNIIFSSSATVYGDPHTVPILENFPVSVTNPYGRTKLMLEEILTDIYKADSTWN 172 Query: 177 IPVLL------SNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG------DGQ 218 I +L ++ S + G P P L+P +A+ R+ V ++G DG Sbjct: 173 IVLLRYFNPIGAHESGDLGENPNGIPNNLLPYVTQVAVGRL---EQVQVFGNDYPTVDGT 229 Query: 219 NVRDWLYVEDHVRALYLVLKK--GRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D + LKK G+ G YN+G ++I+ + + IP Sbjct: 230 GVRDYIHVVDLAKGHVAALKKFEGKQGLNIYNLGTGKGYSVLEIIHSMEKAVGKPIP--- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + +E RPG + +K K+E+GW Q Sbjct: 287 -----YKIVERRPGDIATSYANPAKAKAELGWAAQ 316 >gi|71401858|ref|XP_803911.1| GDP-mannose 4,6 dehydratase [Trypanosoma cruzi strain CL Brener] gi|70866581|gb|EAN82060.1| GDP-mannose 4,6 dehydratase, putative [Trypanosoma cruzi] Length = 354 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 37/328 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 I+TG G GS L L++ V + + + + N + I ++ + D+ D Sbjct: 11 IITGITGQDGSYLAELLLSK-GYDVHGVIRRSSSFNTGRIDHIYRNEHLTLHYGDMTDGT 69 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + +PD + N AA+SHV S + T+ IGT +LE R + + Sbjct: 70 VLHHLIAQLRPDEVYNLAAQSHVKVSFDTPEYTGQTDGIGTLKILEAIR------ANNLV 123 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 + RF Q ST E+YG + + +E P++P SPY+ K + ++ + + +YG+ + Sbjct: 124 ETCRFYQASTSELYGKVQEVPQTEKTPFHPRSPYAVAKLYAFWITVNYRESYGMFACNGI 183 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G +K++ A+ R+ +G L G+ +RDW + +D+V ++L+L+ Sbjct: 184 LFNHESPRRGATFVTKKIVRAAV-RIKKGLQKELLLGNVNALRDWGHAKDYVHGMWLMLQ 242 Query: 239 KGR-------IGERYNIGGNNERKNIDIVF-EIGFLLD---------ALIPKSYSHTELI 281 + GE++++ R+ ++ F ++G+ L+ A LI Sbjct: 243 AEKPDDWVLATGEQHSV-----REFCNLTFRKLGYELEWSGSGVDEVAYDVADSKKVPLI 297 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGW 307 R RP D+SK + E+GW Sbjct: 298 RVDPRYFRPAEVETLLGDASKAERELGW 325 >gi|296242942|ref|YP_003650429.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM 11486] gi|296095526|gb|ADG91477.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM 11486] Length = 318 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/326 (26%), Positives = 143/326 (43%), Gaps = 28/326 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L YL+ QV V+D L+ +G L + S LF F++ D+ + Sbjct: 3 RVLVTGGAGFIGSHLVDYLLGR-GFQVRVVDNLS-SGRLEHVSHHFGSELFEFVKGDLKN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E A+++ D + + AA V S+ N++ TF LLE +C + Sbjct: 61 PEVALKAVEDV--DTVFHLAANPEVRLSVTEPAVHFNENLLATFNLLE------ACRRKG 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F F ST VYG E P S Y A+KA + L+ ++ H YG + Sbjct: 113 GVELFVFASSST--VYGDASVLPTPETHEIKPISVYGASKAGCEALLSSYSHLYGFKGVS 170 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR 241 +N GP + + + + GDG + +L+V D V A V +K Sbjct: 171 LRYANIVGPRLRHGVIYDFIMKLSRNPGELEILGDGSQRKSYLHVSDAVEATVTVAEKSS 230 Query: 242 IG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR------PGHDRRY 294 + +N+ GN + + + +I + ++ L RF+ PG + Sbjct: 231 STYDCFNV-GNEDWVTVAEIADI-------VSRAMGVKPLYRFLSTVKDGRGWPGDVKLM 282 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKT 320 + KIK ++GW P+ + + +T Sbjct: 283 LLSIEKIK-KLGWAPRLSSREAVEET 307 >gi|290994438|ref|XP_002679839.1| NAD dependent epimerase/dehydratase family protein [Naegleria gruberi] gi|284093457|gb|EFC47095.1| NAD dependent epimerase/dehydratase family protein [Naegleria gruberi] Length = 329 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 36/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 M+++VTGGAGF+GS + YL+ +D K ++ VID L G+L +LK +S++ F+Q D Sbjct: 1 MKIVVTGGAGFLGSHMVDYLLKKSDNKDEIYVIDNLQ-TGSLVNLKHLSENPNVHFIQAD 59 Query: 59 ICDR---ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + E I S Q + A+ H + + T + GT+ L W Sbjct: 60 VINALSDERITSLEGIGQIYHMACAASPPHYQKDPI---HTTMTCVQGTYNFLTLATKWN 116 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLV 168 + R L ST EVYG D + + Y S Y K +++ L Sbjct: 117 A----------RLLITSTSEVYG--DPAINPQVETYWGNVNCTGTRSCYDEGKRAAETLC 164 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYH--FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + T V ++ N YGP ++I + + ++G ++ +YG G+ R + YV Sbjct: 165 FDFNRTKNTQVRVARIFNTYGPRMNLTDGRIISNFVYQALKGINITVYGTGKQTRSFCYV 224 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 D + L+ ++ + NIG E +++ +I ++ A EL +D Sbjct: 225 SDQIEGLHTLMNQDVTIGPVNIGNPEEYTVLEMAEKIREMIGATESNQLVFHEL---PQD 281 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 P R D +K K+ +GW P+ + G++ T+ Sbjct: 282 DPKVRRP---DITKAKTLLGWSPKVALHEGISLTIA 314 >gi|87307369|ref|ZP_01089514.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Blastopirellula marina DSM 3645] gi|87290109|gb|EAQ81998.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Blastopirellula marina DSM 3645] Length = 333 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 24/322 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS LC L+ + + D+ T G+ +L + F F+ + DRE Sbjct: 5 LVTGGAGFIGSHLCEALLALGRTVTAIDDEST--GSRQNLSHVIDHENFRFVSGTVSDRE 62 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I+S L Q D + + AA V + I NI T +LL E ++ Sbjct: 63 LIKSLL--VQADEVYHLAAAVGVALIQEEPIQTIERNIYPTELLLAEI-----AAQREAG 115 Query: 124 DQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTYGI 177 R ST EVYG K ++E D+ + ++ Y A+KA ++L LA+ Sbjct: 116 RDIRMFLASTSEVYGKNPKATWTEEDDLVFGSTTRPRWSYGASKAIDEFLALAYWRQRQT 175 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 P ++ N GP ++P I + G ++ DG +R + +V D V A + Sbjct: 176 PTVIGRFFNVVGPRQTGAYGMVLPRFIEAALSGKGPTVHSDGGQIRCFAHVNDVVDAVIQ 235 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD-ALIPKSYSHTELI-RFIEDRPGHDR 292 L+ G+ YNIG + +++ + +D LIP S+ + ED Sbjct: 236 LMGTSSAAGQVYNIGSDRPVTILELAQMVTAAIDPTLIPSFQSYEDAFNSSFEDVI---- 291 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 R D +K++S I + P+ ++E Sbjct: 292 RRVPDLTKLRSAIDYRPKFDLE 313 >gi|326404826|ref|YP_004284908.1| polysaccharide biosynthesis protein [Acidiphilium multivorum AIU301] gi|325051688|dbj|BAJ82026.1| polysaccharide biosynthesis protein [Acidiphilium multivorum AIU301] Length = 322 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 34/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVID-------KLTYAGNLNSLKEISQSNLFS 53 M++++TG AGFIG + L++ + V D +L +A L ++ + F Sbjct: 1 MKVLLTGAAGFIGYHVAEALLSRGALVAGVDDLNPYYDVRLKHA----RLDRLAAHDGFR 56 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F +VDI D +R+ ++ D IV+ AA++ V SI + N++G +LE R Sbjct: 57 FHRVDIADHAALRAVGDDW--DVIVHLAAQAGVRYSIDNPFAYAAANLVGHLSVLEVAR- 113 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWG 172 + + K + S+ VYG+ ++E + P S Y+ATK + + + A+ Sbjct: 114 ---HVPRLKH----LVYASSSSVYGAGTPLPYAETARADRPQSLYAATKRADELMSAAYA 166 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H YGI YGP+ P+ ++ G + LY G RD+ Y++D V Sbjct: 167 HLYGIRQTGLRFFTVYGPWGRPDMAYFGFAEAIMAGRPITLYEAGTLKRDFTYIDDIVEG 226 Query: 233 LYLVLKK--GRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + V++ +G +NIG + D+V L+ + +I P Sbjct: 227 VMGVIEHAPAEVGAHRIFNIGNHRAEFVRDLV--------QLLEEELGRKAVIVDASRPP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + G+ P+ N+ G+ K V WY Sbjct: 279 ADPVETCADLSALAELTGFAPKTNLNQGIKKFVSWY 314 >gi|284051197|ref|ZP_06381407.1| GDP-mannose 4,6-dehydratase [Arthrospira platensis str. Paraca] gi|291567247|dbj|BAI89519.1| GDP-mannose 4,6-dehydratase [Arthrospira platensis NIES-39] Length = 342 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 25/323 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV-D 58 ++TG G GS L L+ + +V I + + + N + ++ I N FL D Sbjct: 8 LITGITGQDGSYLSELLL-EKGYEVHGIIRRSSSFNTDRIEHIYKDPHHPNARLFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +R L+E +P I N A+SHV S + + T +G LLE R + Sbjct: 67 LTDGTTLRRILEEVKPVEIYNLGAQSHVRVSFDCPEYTVDTVGLGVLRLLEAIRDY---- 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 Q RF Q + E++G + + E + P SPY+ K + + + +YG+ Sbjct: 123 QHRTGIQVRFYQAGSSEMFGKVQEIPQKETTHFYPRSPYACAKVYGHWQTVNYRESYGLF 182 Query: 178 ---PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 +L ++ S GP F + I A+ R+++G LY G+ RDW Y +D+VR + Sbjct: 183 ACNGILFNHESPRRGPT-FVTRKITRAVARIVKGMQKELYLGNLDAKRDWGYAKDYVRGM 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD 291 +++L+ + + + NE +I ++ F L Y ++F E RP Sbjct: 242 WMMLQHDQPDDY--VLATNETHSIREFLDVAFNYVNLDWHDY-----VKFDERYLRPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENME 314 DSSK ++ +GW P + E Sbjct: 295 ELLIGDSSKAQNVLGWKPLVSFE 317 >gi|219130674|ref|XP_002185484.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] gi|217403015|gb|EEC42971.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] Length = 514 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 144/332 (43%), Gaps = 39/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS L L+ D ++V+V+D N + N FS + D+ Sbjct: 191 KILVTGGAGFVGSHLVDKLMMD-GMEVIVVDNFFTGQKKNVAHWLHHPN-FSLVVHDVT- 247 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I + + D I + A + + I T+ +GT + L Sbjct: 248 -EPI-----QLEVDEIYHLACPASPPHYQYNPVKTIKTSTMGTL----------NMLGLA 291 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 K+ + + L ST E+YG D + + Y P S Y K ++ ++ ++ + Sbjct: 292 KRVRAKILLTSTSEIYG--DPKVHPQPESYWGNVNTIGPRSCYDEGKRVAETMMYSYKNQ 349 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ V ++ N +GP P +++ I + ++ ++ +YG+G+ R + YV D V Sbjct: 350 NGVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQNKNMTIYGEGKQTRSFQYVTDLVDG 409 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY L G N+G E D I L KS S + ED P R Sbjct: 410 LY-ALMNGNYDLPVNLGNPEEYSVKDFATYIQELT-----KSTSDIIFLPKSEDDPSQRR 463 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + K E+GW PQ ++ GL KT+ ++ Sbjct: 464 P---DITTAKRELGWEPQVKVQKGLEKTIEYF 492 >gi|294791630|ref|ZP_06756778.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|294456860|gb|EFG25222.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 329 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/354 (25%), Positives = 150/354 (42%), Gaps = 57/354 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVKFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE +++FAA S V S+ + N++G++ L+E R Sbjct: 54 DPKLV-GIMKEHNILGVMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESAR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ ST VYG ED P++ Y TK + ++ + YG + Sbjct: 105 -TAGIKHFVFSSTAAVYGEPKVVPICEDAQLQPTNVYGRTKLMIEKMLSDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + H+ ++G DG VRD++ Sbjct: 164 ALRYFNAAGADPSGMIGEDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D A L L+KG + +N+G N GF + +I + T + Sbjct: 224 HVNDLAAAHVLAMDYLRKGGESQVFNLGSGN-----------GFSVKEIIETAKEVTGID 272 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I++ + R G S KIK+ +GW P+ + V + + W W Sbjct: 273 IPIQYGDRRAGDPGTLIASSEKIKNLLGWDPKFS-------NVADVIKDAWHWH 319 >gi|168045717|ref|XP_001775323.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673404|gb|EDQ59928.1| predicted protein [Physcomitrella patens subsp. patens] Length = 339 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 34/324 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS L L+ + +V+V D ++G+ +LK+ F ++ D+ Sbjct: 27 MRILITGGAGFIGSHLVDRLMEEGTNEVIVADNF-FSGSKENLKKWIGHPDFELIRHDVT 85 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + A + I TN+IGT + L Sbjct: 86 ETLFV-------EVDQIYHLACPASPIFYKYNAVKTIKTNVIGTL----------NMLGL 128 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG + +E+ P S Y K ++ L+ + + Sbjct: 129 AKRVGARILLTSTSEVYGDPLEHPQTEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 188 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + ++ N YGP + +++ I + + G + + G R + YV D V L Sbjct: 189 GVEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGETMTVQAPGTQTRSFCYVSDMVDGL 248 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 Y ++ G NIG E + E+ L+ LI S + +E+ P R+ Sbjct: 249 YRLMNGDHTGP-INIGNPGEF----TMLELAGLVKELIEPSAE----TKIVENTPDDPRK 299 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D +K +GW P+ + GL Sbjct: 300 RKPDITKATKLLGWDPKVTLREGL 323 >gi|217972262|ref|YP_002357013.1| UDP-glucose 4-epimerase [Shewanella baltica OS223] gi|217497397|gb|ACK45590.1| UDP-glucose 4-epimerase [Shewanella baltica OS223] Length = 342 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 44/353 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQSNLFSFLQVDI 59 M+++VTGGAG+IGS L+ QV+V D L A + + E F + DI Sbjct: 1 MKVLVTGGAGYIGSHTVLALLQQ-DHQVVVFDNLCNASEVPLARIEAMTGKHIEFFRGDI 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + Q DA+++FAA V S + TN+ G+ LLE + L Sbjct: 60 RDVAALDAVFGAHQFDAVIHFAALKAVGESTQKPLAYYQTNVHGSVCLLE------AMLR 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT---- 174 D F+ S+ VYG L + E MP +PSSPY ATK + ++ + Sbjct: 114 HQVTD---FIFSSSATVYGELAIVPYLESMPLGSPSSPYGATKVMVERIMADYAAANPEF 170 Query: 175 YGIPV-----LLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNV 220 G+ + + ++ S N G P P L+P LA + +H+ ++G DG + Sbjct: 171 RGVSLRYFNPIGAHESGNLGEDPKGIPNNLLPYLAQVAVGRRTHLSVFGGDYPTQDGTCL 230 Query: 221 RDWLYV----EDHVRAL-YLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 RD+L+V E H AL +L + G E +N+G +DI+ F + +P Sbjct: 231 RDYLHVMDLAEGHTAALNWLADHPQQRGIEAFNLGTGQGVSVLDII--AAFEQASGVPVP 288 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 Y R G + ++ K + +GW + N+ ++ T W N Sbjct: 289 Y------EIAPRRAGDLAAFWANADKASTMLGWQAKRNLTQMMHDTWRWQSQN 335 >gi|160902525|ref|YP_001568106.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] gi|160360169|gb|ABX31783.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] Length = 328 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 55/351 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L + L D +V+V D G+ ++K++ ++ D+ + Sbjct: 2 ILVTGGAGYIGSHLVKRL-QDQNKEVVVFDNFE-KGHRWAVKDVQ------VVEGDLRNE 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I A + ++ D + +FAA S V S+ +++ NI GT LL+ + Sbjct: 54 KDIDYAFENYKIDEVYHFAAFSLVGESMTEPNKYFNNNICGTLNLLKNMQ---------- 103 Query: 123 KDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + R++ ST VYG +K +E+ P NP++ Y +K + +L W I + Sbjct: 104 KHKCRYIVFSSTAAVYGEPEKVPITENQPKNPTNIYGQSKLMIE-DILNWYSKLDIIRYV 162 Query: 182 S----NCSNNY-----GPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 + N + Y G H PE LIPL + T + + +++YG DG VRD++ Sbjct: 163 ALRYFNAAGAYYDGSIGEAHEPETHLIPLVLETALGKRDQLYVYGNDYPTKDGTAVRDYI 222 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D + A L +K + E+ +N+G V E+ + + K ++ Sbjct: 223 HVMDLIDAHILAMKWMKENEKSDVFNLGNGQGF----TVLEVIKTAEKVTSKKINY---- 274 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +E RPG S K + + W PQ NK + + + W W Sbjct: 275 EVVERRPGDPAVLIASSKKAEEVLNWHPQ-------NKELEKIISDAWKWH 318 >gi|90410718|ref|ZP_01218733.1| putative nucleotide sugar epimerase [Photobacterium profundum 3TCK] gi|90328349|gb|EAS44647.1| putative nucleotide sugar epimerase [Photobacterium profundum 3TCK] Length = 334 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK--------LTYAGNLNSLKEISQSNLF 52 M+ +VTG +GFIGS + L++ K V+ ID L +A L+ I N F Sbjct: 1 MKYLVTGASGFIGSRVIEMLIH-RKHSVVGIDNNNDYYDTCLKFA----RLERIKNDN-F 54 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F+++D ++ + + +E + D +++ A++ V SI + +N+IG +LE R Sbjct: 55 EFVKIDFSNKTPLDALFEEHEFDRVIHLGAQAGVRYSIENPMAYADSNLIGHLNILEACR 114 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAW 171 + K + + S+ VYG DK F + D +P S Y+ATK S++ + ++ Sbjct: 115 --------NHKIE-HLVYASSSSVYGLNDKTPFETSDSVDHPVSLYAATKKSNELMSHSY 165 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHV 230 H YGIP YGP+ P+ + P T+ I +G + + G RD+ Y++D V Sbjct: 166 SHLYGIPTTGLRFFTVYGPWGRPD-MAPFIFTKKILDGEAIDINNSGNMWRDFTYIDDIV 224 Query: 231 RALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIP 272 + + ++ G YNIG + ++ + EI L Sbjct: 225 EGVVRIADVIPMRNDEWKVETGTPASSSAPYAVYNIGHGSPINLMEFISEIENALGIEAK 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K+Y + G + D+S + G+ P+ ++ G+ V WY Sbjct: 285 KNYRGMQ--------AGDVYKTYADTSDLFKATGYTPKVGVKEGVAAFVKWY 328 >gi|41406528|ref|NP_959364.1| RmlB2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394877|gb|AAS02747.1| RmlB2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 318 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 28/334 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 +R +VTG AGFIGS L L+ D V+ +D +G ++L+ + + F++ DI Sbjct: 6 VRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFA-SGRASNLEHLVGNPAHVFVEADIV 63 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D E I L E +P+ + + AA+ V S+ + N+IGT L E R Sbjct: 64 TADLEAI---LDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAAR------ 114 Query: 119 SQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + S+ +YG+ E +P +P+SPY+A K + + + + H YG+ Sbjct: 115 ---RTGVRKMVHTSSGGSIYGTPPTYPTPETVPTDPASPYAAGKVAGEIYLNTFRHLYGL 171 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +N YGP P ++ + + G ++GDG N RD+++V+D V A Sbjct: 172 DCSHIAPANVYGPRQDPHGEAGVVAIFAQALQSGKPTKVFGDGTNTRDYVFVDDVVDAFV 231 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G+R+NIG E + L + + + + F R G +R Sbjct: 232 KASGDAGGGQRFNIGTGVETSDRQ--------LHSAVAAAVGGPDDPEFHPPRLGDLKRS 283 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 +D +GW P+ ++ G+ +TV ++ + + Sbjct: 284 CLDIGLAARVLGWQPKVGLQQGVARTVEYFRNQH 317 >gi|222056010|ref|YP_002538372.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221565299|gb|ACM21271.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 312 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 148/332 (44%), Gaps = 36/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+ +V+ +D + G+ +++++ F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLCERLLASGN-EVICLDNF-FTGSKKNIEKLCDDRRFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L E D I N A + + I T+++GT + L Sbjct: 59 E-----PILLEV--DRIYNLACPASPIHYQYNPVKTIKTSVMGTI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R LQ ST EVYG E+ P S Y K ++ L++ + Sbjct: 102 AKRVRARILQASTSEVYGDPQVHPQREEYWGNVNPIGIRSCYDEGKRVAETLMMDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + + N YGP +++ I + + G + +YG+G+ R + YV+D V + Sbjct: 162 GVDIRIIRIFNTYGPRMAVNDGRVVSNFIVQALAGEDITVYGEGKQTRSFCYVDDLVDGM 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 +++ N+G E ++ I I + S +++I +D P D + Sbjct: 222 MRMMECEDFIGPVNLGNPTETTIVEFAHRI-------IQLTGSTSKII--YKDLPADDPK 272 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S + ++ W P ++E GL KT+ ++ Sbjct: 273 QRQPDISLAQQKLDWRPTVDVEQGLKKTIDYF 304 >gi|310778603|ref|YP_003966936.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] gi|309747926|gb|ADO82588.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] Length = 369 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 149/334 (44%), Gaps = 32/334 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN---------SLKEISQSNLFSF 54 ++TG G GS L +L+ D +V I + + + N +++++ + Sbjct: 7 LITGITGQDGSFLAEFLL-DKGYEVHGIMRRSSSFNTKRIEHLYLEEAIEDMRKERNIEL 65 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D + ++ QPD I N AA+SHV S + ++ +GT +LE RL Sbjct: 66 YYGDMTDSSNLIRIIQMVQPDEIYNLAAQSHVKVSFEVPEYTADSDAVGTLRVLEAVRLL 125 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++ + Q ST E+YG + + E P+ P SPY+ K ++ + + Sbjct: 126 GMT------EKTKIYQASTSELYGKVQEIPQKETTPFYPRSPYAVAKQYGFWITKNYRES 179 Query: 175 YGIPV---LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 Y + V +L N + F + I LA R+ +G LY G+ ++RDW Y +D+V Sbjct: 180 YDMFVANGILFNHESERRGETFVTRKITLAAARIAKGYQKKLYLGNLNSLRDWGYAKDYV 239 Query: 231 RALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ++++L+ + GE++++ ++ EI + + L K +S Sbjct: 240 ECMWMILQHDKPEDFVIATGEQHSVREFATLAFHEVGIEIDWRGEGLNEKGFSKETEEVL 299 Query: 284 IEDRPGHDRRYAI-----DSSKIKSEIGWFPQEN 312 IE P + R + D +K K+ +GW P++ Sbjct: 300 IEVDPKYFRPAEVETLLGDPTKAKTTLGWNPRKT 333 >gi|291438352|ref|ZP_06577742.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC 14672] gi|291341247|gb|EFE68203.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC 14672] Length = 327 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 32/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGF+GS LC L+ + +V+ +D G+ ++ ++ + F ++ D+C+ Sbjct: 6 VVAGGAGFVGSHLCERLLTN-GWRVVCVDNFV-TGSARNVAHLAGESRFRLIEADVCEGP 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + DA++N A+ + + E + GT LL+ R Sbjct: 64 PPITG----RVDAVLNLASPASPVDYLELPLETLRVGSEGTRHLLDLAR----------A 109 Query: 124 DQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ ST E YG + + P P S Y K ++ L +A+ T+G+ Sbjct: 110 EGARFVLASTSETYGDPLVHPQPESYWGNVNPVGPRSVYDEAKRYAEALTMAYRRTFGVD 169 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P I + + + + GDG R YV D V L + Sbjct: 170 TGIVRIFNTYGPRMRAHDGRAVPTFIRQALAHEPITVAGDGSQTRSLCYVSDLVDGL-VR 228 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + R+ N+G E V + + L + + R ++D P R Sbjct: 229 MTDARLAGPLNLGDQEEIP----VLRLAEWIRDLTASTSGIVHVPRPVDD-PSVRR---P 280 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ + E+GW P+ + E GL +T+ W+ Sbjct: 281 DITRAREELGWSPEFSTERGLIETIDWF 308 >gi|167769249|ref|ZP_02441302.1| hypothetical protein ANACOL_00572 [Anaerotruncus colihominis DSM 17241] gi|167668889|gb|EDS13019.1| hypothetical protein ANACOL_00572 [Anaerotruncus colihominis DSM 17241] Length = 335 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 148/345 (42%), Gaps = 58/345 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF--LQVD 58 M ++VTGGAG+IGS C L+N K +++V+D + +LK IS SF +VD Sbjct: 1 MAILVTGGAGYIGSHTCVELLNAGK-EIVVLDNFVNS-KPEALKRISDITGKSFKSYEVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ +R ++ Q DA+++FA V S + NI GT IL E C Sbjct: 59 LLDRDGVRRVFEQNQIDAVIHFAGLKAVGESCKIPLRYYHNNITGTLILC-EVMAGAGC- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 KK F S+ VYG ++ F EDMP + ++PY TK + ++ W Sbjct: 117 ---KKIVFS----SSATVYGMHNQVPFREDMPLSTTNPYGTTKLFIEQILTDIQKADPQW 169 Query: 172 GHTYGIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGS--HVFLYG---- 215 V L N G P P L+P I ++ G + +YG Sbjct: 170 S------VALLRYFNPIGAHKSGLIGEDPNGIPNNLLPY-IAQVATGKLPDLAVYGDDYD 222 Query: 216 --DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 DG VRD+++V D H++AL ++ + + E N+G +D+V F Sbjct: 223 TPDGTGVRDYIHVVDLAVGHLKALDYIMNRTGV-EAINLGTGKGYSVLDVVH--AFERAC 279 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P Y R G D+SK K +GW + ++ Sbjct: 280 GKPVKY------HIAPRRDGDIATSYADASKAKELLGWSAEHTLD 318 >gi|284161894|ref|YP_003400517.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] gi|284011891|gb|ADB57844.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] Length = 306 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 36/326 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS + L+ D V+V+D L+ +GN N + E + +F ++D+ D Sbjct: 2 ILVTGGAGFIGSHVVDRLI-DNGYDVVVVDNLS-SGNPNYVNENA-----TFYKLDLNDF 54 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ + + + + AA V DE N+ T++LLE R K Sbjct: 55 DKLMEVFRKHKIEEVWHIAANPDVRVGSENPDEIYRNNVSATYVLLEVMR---------K 105 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + R + ST VYG ED P P S Y A+K + + ++ ++ HT+ + + Sbjct: 106 NNVKRLVFTSTSTVYGEAKVIPTPEDYPTIPISIYGASKVACEAMIASYCHTFDMKAWIY 165 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +N G + + + + + G+G+ + ++Y+ D V A++ LK Sbjct: 166 RFANVIGKRSNHGVIYDFIMKLKKNPNELEILGNGEQNKSYIYISDCVDAMFFGLKADDW 225 Query: 243 GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS---- 298 +NIG ++ K + + EI L PK RF G DR + D Sbjct: 226 VNIFNIGSEDQIK-VKRIAEIVCEEMGLNPK-------FRFT----GGDRGWKGDVPVML 273 Query: 299 ---SKIKSEIGWFPQENMESGLNKTV 321 K+KS +GW P+ N E + V Sbjct: 274 LSIEKLKS-MGWKPRYNSEQAVRMAV 298 >gi|119872982|ref|YP_930989.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] gi|119674390|gb|ABL88646.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] Length = 413 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 35/276 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL-NSLKEISQSNLFSFLQVDIC 60 R+++TG GF GS L + L+ D +V + K G L +L + + ++ D+ Sbjct: 7 RVLITGVGGFAGSYLAKALI-DAGAEVYGLVKRRADGTLPKNLVDRGVAGGVKLIEGDLR 65 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ + QPD I + AA+S V RS E + N +GT LLE R+ + Sbjct: 66 DITSLAMAIDKAQPDVIFHLAAQSFVPRSFTHPLETLEINTMGTANLLEAVRM------R 119 Query: 121 DKKDQFRFLQISTDEV----------------YGSLDKGL-------FSEDMPYNPSSPY 157 DK + S++E YG++ +E P P SPY Sbjct: 120 DKTNPVIVFAGSSEEYGLVISSERQYKRALEKYGAVHPPPAKIPELPIAETNPLRPMSPY 179 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFL 213 +A+K DYL+ + YG+ ++S N+ G F + + ++ G + Sbjct: 180 AASKVHGDYLMRTYHAVYGLRTIVSRAFNHEGAGRGIMFVTAQVACQVMKLKMGEADRIK 239 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 G+ RDW +VED V L+ ++G GE YN G Sbjct: 240 IGNVNAFRDWSHVEDIVAGYMLLAERGTPGEVYNQG 275 >gi|329954647|ref|ZP_08295707.1| GDP-mannose 4,6-dehydratase [Bacteroides clarus YIT 12056] gi|328527188|gb|EGF54192.1| GDP-mannose 4,6-dehydratase [Bacteroides clarus YIT 12056] Length = 358 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + T+ I Sbjct: 52 VRDMKQKRTVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAETDAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYARDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFAEAGIQLRWEGTGA 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID + G +L + PK + RP + D +K K+ +GW PQ+ Sbjct: 285 DEKGIDC--KTGKVLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWNPQQT 331 >gi|55821387|ref|YP_139829.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMG 18311] gi|55737372|gb|AAV61014.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMG 18311] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMIKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|325689856|gb|EGD31860.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK115] Length = 347 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECGV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G E +N+G + N+ IV K H Sbjct: 239 YVHPFDLAEAHILAVEHLRAGHPSEAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 336 >gi|297826249|ref|XP_002881007.1| hypothetical protein ARALYDRAFT_481790 [Arabidopsis lyrata subsp. lyrata] gi|297326846|gb|EFH57266.1| hypothetical protein ARALYDRAFT_481790 [Arabidopsis lyrata subsp. lyrata] Length = 343 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 31 MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 89 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 90 EPLLV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 132 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 133 AKRVGARILLTSTSEVYG--DPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 190 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 191 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVE 250 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ + G NIG E +++ + L+ + I+ +E+ P Sbjct: 251 GLMRLMEGDQTGP-INIGNPGEFTMVELAETVKELIKPDVE--------IKMVENTPDDP 301 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 ++ D SK K +GW P+ + GL Sbjct: 302 KQRKPDISKAKEVLGWEPKVKLREGL 327 >gi|262282500|ref|ZP_06060268.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] gi|262261791|gb|EEY80489.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S++ ++ N G LLE + C Sbjct: 55 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G++ + +N+G + N+ IV K H Sbjct: 225 YVHPFDLADAHILAVDYLRAGQLSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARKVLGWQPKFDNIETIIETAWKWH 322 >gi|123443283|ref|YP_001007257.1| GDP-mannose 4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|134047779|sp|Q56872|GM4D_YERE8 RecName: Full=Probable GDP-mannose 4,6-dehydratase; AltName: Full=GDP-D-mannose dehydratase; AltName: Full=ORF13.7 gi|122090244|emb|CAL13110.1| GDP-mannose 4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 372 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 148/353 (41%), Gaps = 40/353 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV 57 + ++TG G GS L +L+ QV I + + + N + + I Q N FL Sbjct: 3 KALITGITGQDGSYLAEFLLEK-GYQVHGIKRRSSSFNTSRIDHIYQDPHEVNPHFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD I N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLIRLVKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAVRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 ---NGLEHKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI + G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANIALGLEDCLYLGNMDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKKGRIGERYNIGGNNE---------------------RKNIDIVFEIGFLLDALI 271 +++L++ + E + I + K ID + I + D Sbjct: 236 QWMMLQQDQ-PEDFVIATGKQITVREFVRMSAKEAGIEIEFSGKGIDEIATISAISDEYA 294 Query: 272 PKSYSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + ++R RP D SK K ++GW P+ +E + V Sbjct: 295 TSAKVGDIIVRVDPRYFRPAEVETLLGDPSKAKEKLGWVPEITVEEMCAEMVA 347 >gi|311033167|ref|ZP_07711257.1| UDP-glucose 4-epimerase [Bacillus sp. m3-13] Length = 337 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+ D +++VID + +L +KEI+ + F+F +++ Sbjct: 1 MAILVTGGAGYIGSHTCVELL-DAGHEIVVIDNFMNSNMESLRRVKEITGKD-FTFYEIN 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D++ + +E +A+++FA V S+ + NI GT +LLE Sbjct: 59 LLDKDRVARVFQEHNIEAVIHFAGLKAVGESVEKPLFYYHNNISGTLLLLEVMH------ 112 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWG 172 QF I S+ VYG + SE P + ++PY TK + + + Sbjct: 113 ------QFGVKNIVFSSSATVYGLPESVPISESFPLSATNPYGQTKLMIEQILRDLFVSD 166 Query: 173 HTYGIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------D 216 + I +L ++ S G P P L+P IT++ G + ++G D Sbjct: 167 QEWSISLLRYFNPIGAHESGRIGEDPNGIPNNLMPF-ITQVAVGKLPQLQVFGDDYDTID 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D H++AL +L+ R E YN+G + +V + +P Sbjct: 226 GTGVRDYIHVVDLARGHLKALENILET-RGVEAYNLGTGTGYSVLQMVQAFEKASEKEVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 + + RPG D +K K ++GW ++++ Sbjct: 285 --------YKVVARRPGDIGECFADPTKAKEDLGWVAEKDL 317 >gi|118580853|ref|YP_902103.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] gi|118503563|gb|ABL00046.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] Length = 362 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 36/341 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------QSNLFSFLQV 57 +VTG AGFIGS L L+ L +V+ +D + G +L E+S Q F+F + Sbjct: 19 LVTGVAGFIGSNLLESLLT-LGQRVVGLDNFS-TGKRANLDEVSRVVTPRQWAAFTFHEG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI + R+A + D I++ AA V RSI +N+ G +L R Sbjct: 77 DIRELAACRAACQGV--DYILHEAALGSVPRSIEDPISSNESNVGGFLNMLVAAR----- 129 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D K + R + ++ YG E++ P SPY+ TK ++ + TY + Sbjct: 130 ---DAKVR-RMVYAASSSTYGDHPGLPKREELIGRPLSPYAVTKYVNELYADVFARTYAM 185 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 ++ N +GP PE +IP I MI V++ G G+ RD+ +VE+ ++ Sbjct: 186 ELVGLRYFNVFGPRQDPEGAYAAVIPRWIRSMIIDETVYINGSGETSRDFCFVENVIQMN 245 Query: 234 YLVL---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH----TELIRFIED 286 L + + + YN N R ++ ++++ L L+P+ + H T L R + Sbjct: 246 LLAATADEPQAVNQVYNTA-VNARTTLNELYDM--LRQRLVPR-FPHLAHRTPLHR--DF 299 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R G D SK +G+ P ++SGL+ ++ WY+DN Sbjct: 300 RAGDVLHSQADISKAARLLGYQPTHTIQSGLDASLSWYVDN 340 >gi|319427023|gb|ADV55097.1| NAD-dependent epimerase/dehydratase [Shewanella putrefaciens 200] Length = 334 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 68/360 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG-------NLNSLKEIS------ 47 M+ +VTG AGFIGSA V++KLT AG N+N+ ++ Sbjct: 1 MKYLVTGAAGFIGSA--------------VVEKLTLAGHQVIGVDNINNYYDVKLKHGRL 46 Query: 48 ---QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT 104 + F+ +++DI DR+ + + Q D +++ AA++ V SI + +N++G Sbjct: 47 NRIEHEKFTLVELDIADRQALLQLFIDEQFDRVIHLAAQAGVRYSIENPHAYADSNLVGH 106 Query: 105 FILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKAS 163 +LE R K + + S+ VYG K F + D +P S Y+ATK + Sbjct: 107 LNILEGCR-------HTKVNHL--IYASSSSVYGLNAKTPFATSDSVDHPVSLYAATKKA 157 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRD 222 ++ + ++ H Y IP YG + P+ + P T+ I EG + + +G RD Sbjct: 158 NELMAHSYSHLYNIPTTGLRFFTVYGAWGRPD-MAPFIFTKKILEGETIDINNNGDMWRD 216 Query: 223 WLYVEDHVRALYLV------------LKKGRIGER------YNIGGNNERKNIDIVFEIG 264 + +V+D V + + ++ G YNIG + +D V I Sbjct: 217 FTHVDDIVEGVVRIADVIPTRNETWTVETGTPASSSAPYAVYNIGHGSPINLMDFVKAIE 276 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D L ++ H F E +PG + D+ + G+ P+ ++ G+ + V WY Sbjct: 277 ---DELGIEAKKH-----FREMQPGDVYQTYADTQDLFVATGYQPKVGVKEGVAEFVAWY 328 >gi|255581115|ref|XP_002531372.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223529032|gb|EEF31020.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] Length = 346 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVY 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E I++ + L++ + I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMIELAETVKELINPEVE--------INMVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + +GL Sbjct: 304 RQRKPDITKAKELLGWEPKVKLRNGL 329 >gi|118464065|ref|YP_882451.1| NAD dependent epimerase/dehydratase family protein [Mycobacterium avium 104] gi|254775718|ref|ZP_05217234.1| NAD dependent epimerase/dehydratase family protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165352|gb|ABK66249.1| NAD dependent epimerase/dehydratase family protein [Mycobacterium avium 104] Length = 349 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 61/363 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGSAL R LV + V ++D L G ++ LF+ D+ Sbjct: 1 MLITGGAGFIGSALSRRLV-EAGYDVALMDVLHPQVHGGDRPVELAPSVRLFTG---DVT 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L+ F+P IV+ AAE+ +S+ A + N++GT LL+ LS+ Sbjct: 57 HAPDFDAVLRLFRPTQIVHLAAETGTAQSLSEATRHGSVNVVGTTQLLD-------ALSR 109 Query: 121 DKKDQFRFLQISTDEVYG-------------------SLDKGLFSEDMPYN--------- 152 + + S+ VYG L G + P Sbjct: 110 SGLVPEQLVLASSRAVYGEGAWQSGAEVFYPQPRSHAQLVAGRWDPQGPAGEQAVPLPSR 169 Query: 153 -------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLA 201 P++ Y+ATK + ++L+ AW + + + N YGP ++ L Sbjct: 170 ADRTEPRPTNVYAATKLAQEHLLAAWTAAHDTNLSVLRLQNVYGPGQSLTNSYTGIVALF 229 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK-GRIGERYNIGGNNERKNIDIV 260 +G + +Y DG+ VRD++Y++D V AL+ +++ R ++G ++ Sbjct: 230 ARLARQGQALEVYEDGRIVRDFVYIDDVVDALFAAVQRPASPQRRLDVGSGRATTIQELA 289 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 I + +A E + + R G R + D S++GW P+ +E GL Sbjct: 290 NTIAAMCEA--------PEPVVVGKFRDGDVRAASCDIEPATSQLGWHPKWTLEDGLRAL 341 Query: 321 VCW 323 + W Sbjct: 342 LEW 344 >gi|116628119|ref|YP_820738.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMD-9] gi|18265748|gb|AAL67298.1|AF389475_4 UDP-glucose 4-epimerase [Streptococcus thermophilus] gi|52001508|gb|AAU21560.1| GalE [Streptococcus thermophilus] gi|116101396|gb|ABJ66542.1| UDP-galactose 4-epimerase [Streptococcus thermophilus LMD-9] gi|312278718|gb|ADQ63375.1| UDP-glucose 4-epimerase, putative [Streptococcus thermophilus ND03] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|302870641|ref|YP_003839278.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] gi|315506878|ref|YP_004085765.1| nad-dependent epimerase/dehydratase [Micromonospora sp. L5] gi|302573500|gb|ADL49702.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] gi|315413497|gb|ADU11614.1| NAD-dependent epimerase/dehydratase [Micromonospora sp. L5] Length = 325 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 31/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+ S L LV + V+V+D G+ +++ + F+ ++ DI D Sbjct: 12 RILVTGGAGFVPSHLVDRLV-ERGCTVVVLDNFV-TGSKDNVAHLLDKPTFTLVEADISD 69 Query: 62 RECIRSALKEFQPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 A+ E + DAI++ A+ S D L E + + T LLE + Sbjct: 70 GLPQHPAMAE-RFDAILHMASPASPTDFEKLPV-EILRVGSVATLALLE----------R 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 D RFL ST E YG + E P S Y K S+ +A+ + Sbjct: 118 ATDDGARFLMASTSEAYGDPKEHPQRETYWGNVNPIGIRSVYDEAKRFSEAATMAYHRSR 177 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G + N YGP P+ + IP I++ + G + ++G G R YV+D VR + Sbjct: 178 GTDTAIVRIFNTYGPRMRPDDGRAIPTFISQALRGEPITVHGTGNQTRSICYVDDLVRGI 237 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+L G N G +E + I L S S I D P R Sbjct: 238 LLLLDSTETGP-INCGTEHEMSMRQLAETIVSLT-----GSTSEVSYITRASDDPEMRR- 290 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +G+ P E GL +T+ ++ Sbjct: 291 --PDLTLARELLGYEPSVTPEDGLRRTIEYF 319 >gi|156321311|ref|XP_001618246.1| hypothetical protein NEMVEDRAFT_v1g155184 [Nematostella vectensis] gi|156198185|gb|EDO26146.1| predicted protein [Nematostella vectensis] Length = 324 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 154/341 (45%), Gaps = 32/341 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLN--SLKE--ISQSNLFSF 54 M+++VTG AGFIG L L+ + V+ ID + Y NL LKE I ++ F Sbjct: 1 MKILVTGAAGFIGFHLSERLLAEGH-TVVGIDNINDYYDVNLKYARLKELGIDKNRAEVF 59 Query: 55 LQVDICD-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 Q + E + + D + N AA++ V SI D +I +NI+G +LE Sbjct: 60 YQESSSNIYEKLFQLFTSEKFDVVCNLAAQAGVRYSIENPDVYIQSNIVGFLNILE---- 115 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWG 172 C + K + S+ VYG+ K FSE D NP S Y+ATK S++ + + Sbjct: 116 --CCRHHEIK---HLVYASSSSVYGANKKVPFSEEDSVDNPVSLYAATKKSNELMAHTYS 170 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS-HVFLYGDGQNVRDWLYVEDHVR 231 H Y IP YGP+ P+ + P+ I + + ++ G RD+ Y++D V Sbjct: 171 HLYKIPTTGLRFFTVYGPWGRPD-MAPILFADAISNNLSIKVFNKGDMERDFTYIDDIVE 229 Query: 232 ALYLVLKKG----RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + V++K + + YNIG N+ K +D + E + S + + + Sbjct: 230 GVKRVIEKPVERRELYKIYNIGNNDSIKLLDFIRE--------METSIGKEAVKEMLPMQ 281 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 G +R + + + + P+ + G+++ V WY+ N Sbjct: 282 MGDVKRTWANVDGLINYYDYKPKVKVAEGVSRFVQWYIRYN 322 >gi|323699841|ref|ZP_08111753.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. ND132] gi|323459773|gb|EGB15638.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans ND132] Length = 319 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 33/334 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDIC 60 + +TGGAGFIGS L L+ D K V + D L+ NSLK + ++ + +Q DI Sbjct: 7 ICITGGAGFIGSRLAGRLLADNK--VTIYDNLSR----NSLKSCAFADHPNLNLVQGDIL 60 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D ++ K P D +++ A + + + + N++G+ L C Sbjct: 61 D---VKELTKAIAPADYVIHCAGIAGIFTVVRNTVRTLEVNMVGSLNTLRAAAESGRCK- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-----PYSATKASSDYLVLAWGHT 174 R + ST EV GSL D ++ Y+ +K + ++L A+ Sbjct: 117 -------RIVCFSTSEVMGSLAFVSRETDRTVIGAAGQARWTYAVSKLAEEHLASAFHRE 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+P + N YGP E + + I + ++ + ++GDG +R W +V+D + Sbjct: 170 QGLPATVVRPFNIYGPGQVGEGAMKIFINKALKNEPITIFGDGTQIRAWCFVDDMLDGTL 229 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L L KK +GE +NIG NI V I L + + S +E++ + E R Sbjct: 230 LCLEKKEAVGEAFNIG------NIRSVQTIYGLANTVTRVLGSKSEVV-YGEARSADIEL 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K + +G+ + ++E G+ +T +Y N Sbjct: 283 RVPCVDKARELLGFEAKVDLEEGIRRTADFYRAN 316 >gi|254486854|ref|ZP_05100059.1| UDP-glucuronic acid decarboxylase 1 [Roseobacter sp. GAI101] gi|254488648|ref|ZP_05101853.1| UDP-glucuronic acid decarboxylase 1 [Roseobacter sp. GAI101] gi|214043723|gb|EEB84361.1| UDP-glucuronic acid decarboxylase 1 [Roseobacter sp. GAI101] gi|214045517|gb|EEB86155.1| UDP-glucuronic acid decarboxylase 1 [Roseobacter sp. GAI101] Length = 323 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ +VL D L + G +++ + + F F++ D+ Sbjct: 10 RILITGGAGFLGSHLTDRLLEQGH-EVLCADNL-FTGTKRNIEHLHANPRFEFIRHDV-- 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 66 -----TFPLYVEVDEIYNLACPASPVHYKHDPVQTTKTSVHGAI----------NMLGLA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + Q ST EVYG +ED P P S Y K ++ L + + Sbjct: 111 KRLNCKIFQASTSEVYGDPFIHPQTEDYWGNVNPIGPRSCYDEGKRCAETLFFDYHRQHD 170 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP +H +++ I + + G + +YGDG R + YV+D V + Sbjct: 171 LNIKVARIFNTYGPRMHHADGRVVSNFIVQALAGKSITIYGDGSQTRSFCYVDDLVEGFI 230 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L+ + N+G E F I L + +I + S + LI ED P D + Sbjct: 231 RLMATDDDVTGPVNLGNPGE-------FTIKELAEKVIEMTGSKSRLI--FEDLPTDDPK 281 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S +S + W P +E GL KT+ ++ Sbjct: 282 QRQPDISLARSTLDWEPTVRLEEGLQKTIAYF 313 >gi|167536220|ref|XP_001749782.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771709|gb|EDQ85371.1| predicted protein [Monosiga brevicollis MX1] Length = 445 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 36/343 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL----FSFLQVD 58 ++VTG AGFIG L L +L V+ ID ++ +LKE L L VD Sbjct: 99 ILVTGAAGFIGYHLAASL-RELNNVVVGIDSFNDYYDV-TLKEARAHKLERLGVVMLNVD 156 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 ICD +++ ++ D I + AA++ V S+ +++ +N+ +LE R Sbjct: 157 ICDESMLKTLHARYKFDYIGHLAAQAGVRYSVNHPHQYVHSNVDCFVTMLELLR------ 210 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG F+ED + P++ Y ATK ++ L A+ H YG+ Sbjct: 211 ---HTPEVPLVYASSSSVYGKGASIPFTEDECSDRPTNVYGATKRMNELLAHAYNHLYGV 267 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN---VRDWLYVEDHVRALY 234 +GP+ P+ + R+ G + +Y N RD+ +V+D V Sbjct: 268 KATGLRFFTVFGPFGRPDMAPYIFTDRISRGLPIDVYHTANNEEMRRDFTHVDDIVDGFM 327 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +K + +NIG + + + I + AL K+ H D P HD Sbjct: 328 RAMKHAAPYDVFNIG---RGEPVSVPQFIEMVESALQKKADRH--------DMPAHDAEL 376 Query: 295 AI---DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + ++S ++G+ P+ + G++ V WY +W+ + L Sbjct: 377 MVTFANTSHAMRKLGYAPRVATQDGVDNFVAWY---DWYSKKL 416 >gi|188582457|ref|YP_001925902.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179345955|gb|ACB81367.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 337 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/346 (24%), Positives = 149/346 (43%), Gaps = 36/346 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFL 55 M +VTG AGFIG AL R L+ V D L+ ++ +LK ++L F + Sbjct: 1 MHALVTGSAGFIGHALSRRLLAAGH-GVTGFDALSPYYDV-ALKRARHADLARHPGFEAV 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + + + +PD + + AA++ V S++ ++ N++G LLE R Sbjct: 59 EARLETPGALLDVMARVKPDLVFHLAAQAGVRYSLIDPGAYVEANLVGFANLLEAVR--- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHT 174 L ST YG F E D +P + Y+A+K +++ + ++ H Sbjct: 116 ------AHPVRHLLTASTSSAYGGNTSVPFRETDRAVSPLTLYAASKLANEAMAHSYAHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +G+P YGP+ P+ + L +++ G + ++G+G RD+ +++D V A+ Sbjct: 170 FGVPTTAFRFFTVYGPWGRPDMALFLFTRKILAGEPIEVFGEGAAERDFTFIDDLVDAI- 228 Query: 235 LVLKKGRIGERYNIGGNNERKN----------IDIVFEIGFLLDALIPKSYSHTELIRFI 284 L L + R R + GG + ++I LDA+I T L R Sbjct: 229 LALSE-RPPPRPSAGGPVSPADTLSAVAPYRLVNIGGGRPVRLDAMI--GALETALGRKA 285 Query: 285 ED-----RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 E PG R + + +G P+ +E G+ V WYL Sbjct: 286 ERVLKPLPPGDVIRTHASTDLLADLVGRLPETPLEIGIPAFVKWYL 331 >gi|320012487|gb|ADW07337.1| NAD-dependent epimerase/dehydratase [Streptomyces flavogriseus ATCC 33331] Length = 352 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 146/357 (40%), Gaps = 53/357 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + R L D + +V+D L + + S+ + D+ Sbjct: 1 MRVLVTGGAGFIGSQIVRTLAADGH-EPVVLDALLPSAHGASVPPPPPG--VRSVVADVR 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 DRE + AL DA+ + AA + + A +++ N GT +LL E Sbjct: 58 DREAVAGALTGI--DAVCHQAAMVGLGKDFADAPQYVGCNDFGTAVLLAEMAAAGIRYLV 115 Query: 115 ------------WSC----------LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN 152 + C S D RF + L GL +ED P + Sbjct: 116 LAGSMVVYGEGRYDCPRHGGVRPGPRSVADLDAGRF-EPRCPSCRSELVPGLVTEDAPVD 174 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI-----TRMIE 207 P + Y+ATK + ++L AW G + N YGP P + + + Sbjct: 175 PRNVYAATKLAQEHLAAAWTRATGGRAVALRYHNVYGP-GMPRDTPYAGVASFFRSALAR 233 Query: 208 GSHVFLYGDGQNVRDWLYVED----HVRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFE 262 G ++ DG RD+++V D +V AL + ++G + YN G + Sbjct: 234 GESPRVFEDGGQRRDFVHVRDVATANVTALAALRERGPGSFDAYNTGSG-------VPHT 286 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 IG + AL ++ + E R G R DS +++ E+GW P + +G+ + Sbjct: 287 IGEMAWALA-SAHGGPAPVVTGEYRLGDVRHVTADSRRLREELGWKPATDFVTGMRE 342 >gi|254787087|ref|YP_003074516.1| UDP-glucose 4-epimerase [Teredinibacter turnerae T7901] gi|237687307|gb|ACR14571.1| UDP-glucose 4-epimerase [Teredinibacter turnerae T7901] Length = 339 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/357 (25%), Positives = 152/357 (42%), Gaps = 52/357 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ C L++ +V+V+D L + LN ++E+S + +F+Q D Sbjct: 1 MSILVTGGAGYIGTHTCIELLS-AGYEVVVVDNLCNSKREALNRVEEVSGKKV-TFIQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ +R E+ DA+++FA V S + TN+ GT L C Sbjct: 59 VTDKAVLRDIFSEYSIDAVIHFAGLKAVGESTQIPLRYYHTNLGGTVAL---------CE 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV----LAWGHT 174 + R L S+ VYG E P + ++PY +K + ++ G+ Sbjct: 110 VMEAFGVSRLLFSSSATVYGDPASAPILETFPTSATNPYGRSKLMVEEILRDACRVPGND 169 Query: 175 YGIPVLL------SNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 + + +L ++ S G P P L+P +A + + + + ++G DG Sbjct: 170 WRVGLLRYFNPIGAHPSGRLGEDPQGIPNNLLPYVAQVAVGKLAKLRVFGDDYPTVDGTG 229 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D HVRAL +L YN+G + IV IP Sbjct: 230 VRDYIHVVDLARGHVRALEKLLNCQPACLTYNLGTGQGYSVLQIVDAFAKACGKEIP--- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 E RPG D + +E+GW E GL + V + W W+ Sbjct: 287 -----YEIAERRPGDIAECYADPALATNELGW----KAEYGLEQMVA----DTWRWQ 330 >gi|92113883|ref|YP_573811.1| NAD-dependent epimerase/dehydratase [Chromohalobacter salexigens DSM 3043] gi|91796973|gb|ABE59112.1| NAD-dependent epimerase/dehydratase [Chromohalobacter salexigens DSM 3043] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 159/341 (46%), Gaps = 31/341 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS-----FL 55 M +++TG AGFIG A+ + L + ++ ID L ++ SLK+ +L + F Sbjct: 1 MNILITGMAGFIGHAVAKRLAAEGH-DIVGIDNLNDYYDV-SLKQARLDDLAAWPNVRFE 58 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ++D+ DR + + + + +++ AA++ V S+ + +N++G +LE Sbjct: 59 RLDLADRAGMERLFADTRFERVIHLAAQAGVRYSLDNPHVYAQSNLVGHLNVLE------ 112 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHT 174 C Q + S+ VYG + FS D +P S Y+ATK +++ + ++ H Sbjct: 113 GCRHQQVP---HLIYASSSSVYGQNAQVPFSTADAVDHPISLYAATKKANELMTHSYSHL 169 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDGQNVRDWLYVEDHVR 231 YGIP YGP+ P+ + TR I E VF +GD RD+ Y++D V Sbjct: 170 YGIPATGLRFFTVYGPWGRPDMAM-FKFTRAILADEPLPVFNHGDLS--RDFTYIDDIVE 226 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDI-VFEIGF-----LLDAL--IPKSYSHTELIRF 283 + +++ + + G + ++ ++ IG L+D + + ++ T F Sbjct: 227 GVVRIMQAIPEADPDSPGASPDQSTAPFALYNIGHGSPVALMDFVHALERATGRTARCDF 286 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +PG R D+ + ++G+ PQ ++ G+ + V WY Sbjct: 287 KPMQPGDVPRTWADTDALFEKVGYRPQVGVDEGVARFVEWY 327 >gi|290959795|ref|YP_003490977.1| UDP-glucose 4-epimerase [Streptomyces scabiei 87.22] gi|260649321|emb|CBG72436.1| UDP-glucose 4-epimerase [Streptomyces scabiei 87.22] Length = 320 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 46/333 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++L+ + +V+V+D L+ +E + SF++ DI Sbjct: 4 KYLVTGGAGYVGSVVAQHLL-EAGHEVVVLDNLS-----TGFREGVPAGA-SFIEGDI-- 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + F DA+++FAA S V S++ +++ N+ GT LL R Sbjct: 55 RDAAKWLDDSF--DAVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLAAMR--------- 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 + + + ST YG + E P P++PY A+K + D+++ +G+ + Sbjct: 104 EAGVRKLVFSSTAATYGEPETTPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVS 163 Query: 181 -----LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL + ++ +G + ++G DG VRD+++V Sbjct: 164 LRYFNVAGAYGTCGERHDPESHLIPL-VLQVAQGRRDAISVFGDDYPTPDGTCVRDYIHV 222 Query: 227 EDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L R GE N+G N +++ + + IP+ + Sbjct: 223 ADLADAHLLALDAARPGEHLICNLGNGNGFSVREVIETVRQVTGHPIPEVVA-------- 274 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 R G + ++ +GW P +G+ Sbjct: 275 PRRAGDPATLVASADTARARLGWNPSRADLAGI 307 >gi|242094594|ref|XP_002437787.1| hypothetical protein SORBIDRAFT_10g002560 [Sorghum bicolor] gi|241916010|gb|EER89154.1| hypothetical protein SORBIDRAFT_10g002560 [Sorghum bicolor] Length = 374 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 22/260 (8%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 95 ADLSDSSSLRRALDAIAPDEVYNLAAQSHVAVSFEVPDYTADVTATGALRLLEAVRL--- 151 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q + E++GS SED P++P SPY+A K ++ + + + YG Sbjct: 152 -----SRKPIRYYQAGSSEMFGSTPPPQ-SEDTPFHPRSPYAAAKVAAHWYTVNYREAYG 205 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 I VL ++ S G +F + I A+ R+ G + VFL G+ RDW + D+V Sbjct: 206 IFACNGVLFNHESPRRG-ENFVTRKITRAVGRIKVGLQTKVFL-GNLSAARDWGFAGDYV 263 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++L+L++ + + + E ++ + F L K + + F RP Sbjct: 264 EAMWLMLQQDQPAD--YVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDKKYF---RPAE 318 Query: 291 DRRYAIDSSKIKSEIGWFPQ 310 DS+K + + W P+ Sbjct: 319 VDSLKGDSTKARKVLKWKPK 338 >gi|27597153|dbj|BAC55147.1| UDP-glucose 4-epimerase EpsS [Methylobacillus sp. 12S] Length = 327 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 52/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS + + L+ + V+ D L+ +G +++ +F+Q D+ Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGH-DVITFDNLS-SGYRDAVVG------GTFVQADLA 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + PDA+++FA+ V S+ D++ N T LL+ + Sbjct: 53 DKAALDEVFVKHTPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLD---------AM 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K F+ ST V+G + E NP +PY +K + + + YGI + Sbjct: 104 VKHGVNYFIFSSTAAVFGEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRDW 223 ++ G H PE LIPL + + I G ++ ++G DG +RD+ Sbjct: 164 CLRYFNAAGADPEGQLGERHEPETHLIPL-VLQAISGRRDNITVFGRDYDTPDGTCIRDY 222 Query: 224 LYVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-E 279 +++ D A L L+K I RYN+G GF + +I + T + Sbjct: 223 IHIVDLCSAHSLALRKLMETNISRRYNLGNG-----------AGFSVQEVIAAAQKVTGK 271 Query: 280 LIRFIED--RPGHDRRYAIDSSKIKSEIGWFP 309 I+ E R G R D+S +SE+GW P Sbjct: 272 PIKVAEGERREGDPARLVADASLARSELGWKP 303 >gi|325276930|ref|ZP_08142617.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51] gi|324097945|gb|EGB96104.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51] Length = 314 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 29/307 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ + V V+D L+ N +++ L ++ D+ D Sbjct: 11 ILITGGAGFIGSHLADALLASGRT-VRVLDNLSTGKRSN--LQLANPRL-QLIEGDVADA 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+ Q A+V+ AA + V S+ +N IGT + E RL Sbjct: 67 VLVAQAVSGCQ--AVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRLAGVK----- 119 Query: 123 KDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+ VYG+ +G +ED P P +PY++ K +S+Y + + +G+ ++ Sbjct: 120 ----RVLFASSAAVYGNNGEGASIAEDTPKAPLTPYASDKLASEYYLDFYQRQHGVEPVV 175 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSH----VFLYGDGQNVRDWLYVEDHVRALYLVL 237 N YGP P I+ E S V ++GDG+ RD+++V D ++ L L Sbjct: 176 FRFFNIYGPRQDPSSPYSGVISIFAERSQKSLPVSVFGDGEQTRDFVFVSDLIKLLMQGL 235 Query: 238 KK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ G + N+ G N+ +++ V A + + T + + RPG R Sbjct: 236 ERPGAVTGAVNV-GLNQATSLNQVL-------AALSQVLGKTPEVNYQPARPGDIRHSRA 287 Query: 297 DSSKIKS 303 ++ ++ S Sbjct: 288 NNQRLLS 294 >gi|225449563|ref|XP_002283871.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147766093|emb|CAN65700.1| hypothetical protein VITISV_010481 [Vitis vinifera] gi|296086255|emb|CBI31696.3| unnamed protein product [Vitis vinifera] Length = 345 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++L++ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNY-FTGSKDNLRKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + ++ Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLVHPQEESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + I G + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGESLTVQAPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ + I +E+ P Sbjct: 253 GLVRLMEGDNTGP-INIGNPGEFTMLELAETVKELINPKVE--------ISMVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P + GL Sbjct: 304 RQRKPDITKAKELLGWEPNVKLREGL 329 >gi|212691338|ref|ZP_03299466.1| hypothetical protein BACDOR_00830 [Bacteroides dorei DSM 17855] gi|237726361|ref|ZP_04556842.1| conserved hypothetical protein [Bacteroides sp. D4] gi|212666091|gb|EEB26663.1| hypothetical protein BACDOR_00830 [Bacteroides dorei DSM 17855] gi|229434887|gb|EEO44964.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 312 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 147/334 (44%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+ + I V+ +D + G+ ++ ++ F ++ DI Sbjct: 3 RILVTGGAGFIGSHLCTRLIEEGNI-VICLDNF-FTGSKENISYLTGHPRFELIEHDI-- 58 Query: 62 RECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + F D I N A + A + T + GTF + L Sbjct: 59 -------INPFWTDVDEIYNLACPASPIHYQHDAIKTAKTAVFGTF----------NMLG 101 Query: 120 QDKKDQFRFLQISTDEVYGS-----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K+++ + LQ ST EVYG +G + P S Y K ++ L + + Sbjct: 102 LAKRNKAKILQASTSEVYGDPLSHPQREGDWGNVNPIGYRSCYDEGKRCAETLCMDYYRQ 161 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ V + N YGP + ++I + + ++ + +YGDG+ R + Y++D V Sbjct: 162 HGVLVKIIRIFNTYGPNMLTDDGRVISNFVVQALQDKDITIYGDGKQTRSFQYIDDLVEG 221 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ + NIG E F I L ++ + SH+ +I E P D Sbjct: 222 MMRMMATEDHFTGPVNIGNPCE-------FSIFELAQKILELTRSHSSII--FEPLPHDD 272 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + + ++ W P ++E GL K + ++ Sbjct: 273 PRQRRPDITLAREKLDWEPHIHLEEGLTKVIDYF 306 >gi|262395460|ref|YP_003287313.1| UDP-glucose 4-epimerase [Vibrio sp. Ex25] gi|262339054|gb|ACY52848.1| UDP-glucose 4-epimerase [Vibrio sp. Ex25] Length = 338 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + +F+Q D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLERIEKVCGVKPTFIQAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + LK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKSTMVEVLKSHDIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P ++++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALIP 272 VRD+++V D HV AL V K + YN+G N +++V FE D +P Sbjct: 228 GVRDYIHVMDLSDGHVAALEKVGNKAGL-HVYNLGTGNGYSVLEMVKAFETASGKD--VP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D SK +E+GW +E T W +N Sbjct: 285 --------YQLVERRPGDIAECWADPSKAMNELGWKASRTLEEMTGDTWRWQSNN 331 >gi|84515104|ref|ZP_01002467.1| NAD-dependent epimerase/dehydratase [Loktanella vestfoldensis SKA53] gi|84511263|gb|EAQ07717.1| NAD-dependent epimerase/dehydratase [Loktanella vestfoldensis SKA53] Length = 373 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 40/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 R ++TG G GS L +L+ +V I + + N + I Q + F Sbjct: 4 RALITGVTGQDGSYLAEFLLAK-GYEVHGIKRRASSLNTARVDHIYQDPQTDNPRFVLHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + + + QPD + N A+SHV S + + +GT LLE R Sbjct: 63 GDLTDASNLTRIIAQVQPDEVYNLGAQSHVAVSFEAPEYTADVDALGTLRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L ++K RF Q ST E+YG + + +E P++P SPY K + ++ + + YG Sbjct: 120 -LGLERKT--RFYQASTSELYGQVTQSPQTETTPFHPRSPYGVAKLYAYWICVNYREAYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + G LY G+ +RDW + +D+VR Sbjct: 177 LHACNGILFNHESPRRGETFVTRKITRGLANIALGLENCLYMGNIDALRDWGHAKDYVRM 236 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLLD-----------------ALI 271 +++L++ + E Y I + D + E+G LD L Sbjct: 237 QWMMLQQDQ-PEDYVIASGVQHSVRDFIRWSAAELGLDLDFTGTGRAETAVVTAVRSDLA 295 Query: 272 PKSYSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 PK ++R RP D SK + ++GW PQ Sbjct: 296 PKVRVGDTIMRIDPRYYRPAEVESLLGDPSKARKQLGWTPQ 336 >gi|313676755|ref|YP_004054751.1| nad-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] gi|312943453|gb|ADR22643.1| NAD-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] Length = 352 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/364 (22%), Positives = 157/364 (43%), Gaps = 56/364 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----------------YAGNLNSL 43 M+++VTG AGFIG L YL+ + +V+ +D + YA ++ Sbjct: 1 MKVLVTGSAGFIGYHLANYLL-ERGDEVVGLDSINDYYDINLKYGRLKQSGIYANDIKEE 59 Query: 44 KEISQS--NLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +EI S ++F + ++ + + + + + D ++N AA++ V S+ +I +NI Sbjct: 60 EEIKSSIYQNYTFTKSNLENDIYLSNLFNKHKFDVVINLAAQAGVRYSLSNPKAYIKSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSAT 160 G +LE +C + K+ + S+ VYGS K FS D +P S Y+A+ Sbjct: 120 EGFVNILE------ACRHNNVKN---LVYASSSSVYGSNTKVPFSVHDNVDHPVSLYAAS 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + H +G+P YGP+ P+ + + +IEG + ++ G V Sbjct: 171 KKSNELMAHTYSHLFGLPTTGLRFFTVYGPWGRPDMALFIFTKAIIEGKPIDVFNYGNMV 230 Query: 221 RDWLYVEDHVRALYLVL-KKGRIGER-----------------YNIGGNNERKNIDIVFE 262 RD+ Y+ D V+ + + + E YNIG ++ K +D + Sbjct: 231 RDFTYINDIVKGIVKTIDNPAKPNEDWNSNSPDPASSKAPYNIYNIGNSSPIKLLDFI-- 288 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 I + + + +PG D + + + P+ N+ G+ + Sbjct: 289 ------EAIEEKLGMNAKMNKMPIQPGDVPFTYADVTDLTKNFDYKPKTNIREGVANFIE 342 Query: 323 WYLD 326 WYL+ Sbjct: 343 WYLN 346 >gi|295099757|emb|CBK88846.1| UDP-galactose 4-epimerase [Eubacterium cylindroides T2-87] Length = 338 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 47/340 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGGAG+IGS C L+N+ +V+++D L Y N ++ I Q +F Q D Sbjct: 1 MKILVTGGAGYIGSHTCVELLNE-GYEVVIVDNL-YNSNQKAVDRIEQITQKKVTFYQND 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DRE + + DA+++FA V S+ E+ T NI GT IL + R Sbjct: 59 ILDREALDQIFTKENVDAVIHFAGLKAVGESVRKPIEYYTNNIQGTLILTDVMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGHTYGI 177 K + + S+ VYG+ +E+ P ++PY TK + +L HT Sbjct: 113 ---KHNVKNIIFSSSATVYGNPAMIPITEECPKGVCTNPYGWTKWMLEQ-ILTDIHTADP 168 Query: 178 P--VLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQ 218 V+L N G P P L+P +A + + V ++G DG Sbjct: 169 EWNVMLLRYFNPIGAHESGLIGEDPKGIPNNLLPYIAQVAIGKLECVGVFGDDYDTPDGT 228 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV+AL + +K + + YN+G N +D++ K+ Sbjct: 229 GVRDYIHVVDLAKGHVKALNKIKEKAGV-KVYNLGTGNGYSVLDVIHA--------FEKA 279 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 H + R G K E+GW Q N++ Sbjct: 280 CGHEIPYQIKPRREGDIATCYSKCDLAKEELGWQAQYNLD 319 >gi|254455972|ref|ZP_05069401.1| GDP-mannose 4,6-dehydratase [Candidatus Pelagibacter sp. HTCC7211] gi|207082974|gb|EDZ60400.1| GDP-mannose 4,6-dehydratase [Candidatus Pelagibacter sp. HTCC7211] Length = 349 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 30/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 + ++TG G GS L +L+N +V I + T N + + + Q+ F Sbjct: 3 KALITGITGQDGSYLAEFLLNK-GYEVHGIKRRTSLINTDRIDHLYQDPHEQNRNFILHH 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E +PD I N AA+SHV S + ++ +G +LE R+ Sbjct: 62 GDLTDGTSLIRIIQEVKPDEIYNLAAQSHVAVSFEQPEYTANSDALGALRILEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK ++ Q ST E+YG+ + +E P+ P SPY K + ++ + + YG Sbjct: 119 -LKLEKK--IKYYQASTSELYGATKETPQNEQTPFYPRSPYGVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I A+ R+ G LY G+ ++RDW + +D V A Sbjct: 176 IYACNGILFNHESPVRGETFVTRKITRALARIKLGIQKNLYIGNLSSLRDWGHAKDFVEA 235 Query: 233 LYLVLKKGR-------IGERYNIGG--NNERKNIDIVFE-IGFLLDALIPKSYSHTELIR 282 +L+L++ + G ++++ N KN+++ + G L+ + S++ ++I+ Sbjct: 236 QWLMLQQQKPEDFVIATGTQFSVRDFINLASKNLNMKIDWNGKGLNEV--GSFNGEDIIK 293 Query: 283 FIED--RPGHDRRYAIDSSKIKSEIGWFPQENMES 315 RP D+SK K ++ W P+ + E Sbjct: 294 VDPRYFRPTEVENLFGDASKAKDKLNWVPKISFEQ 328 >gi|75908318|ref|YP_322614.1| GDP-mannose 4,6-dehydratase [Anabaena variabilis ATCC 29413] gi|75702043|gb|ABA21719.1| GDP-mannose 4,6-dehydratase [Anabaena variabilis ATCC 29413] Length = 344 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 17/258 (6%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L+E QP I N A+SHV S + + +GT LLE R + Sbjct: 51 DLTDGTTLRRILEEVQPTEIYNLGAQSHVRVSFDSPEYTVDAVGMGTLRLLEAIRDY--- 107 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + Q RF Q + E+YG + SE P+ P SPY+ K + + + + +YG+ Sbjct: 108 -QRRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYGL 166 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ +++ G+ +Y G+ RDW Y +D+VRA+ Sbjct: 167 FACNGILFNHESPRRGETFVTRKITRAVAQIVAGNQKNIYMGNLDAKRDWGYAKDYVRAM 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD 291 +L+L++ + + + E ++ E+ F L + Y + F E RP Sbjct: 227 WLMLQQEQPDD--YVIATGETHSVREFLELAFGYVNLNWQDY-----VEFDERYLRPAEV 279 Query: 292 RRYAIDSSKIKSEIGWFP 309 D +K + ++GW P Sbjct: 280 DLLIGDPTKAQQKLGWKP 297 >gi|170742786|ref|YP_001771441.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168197060|gb|ACA19007.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 324 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS LC L+ +VL +D + G +++ + F ++ D+ Sbjct: 8 KILVTGGAGFLGSHLCERLLAQGH-EVLCLDNF-FTGTRANVRHLLDEPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQFDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + LQ ST EVYG + E+ P S Y K ++ L + + Sbjct: 109 KRVKAKVLQASTSEVYGDPEVHPQPEEYWGRVNPIGFRSCYDEGKRCAETLFFDYHRQHN 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P+ + N YGP P +++ I + + G + LYGDG R + YV+D + A+ Sbjct: 169 LPIKVVRIFNTYGPRMHPNDGRVVSNLIVQALRGEDITLYGDGLQTRSFCYVDDLIEAML 228 Query: 235 LVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 ++ G + NIG E F I L + ++ + S + L+ D P Sbjct: 229 RMMATGPEVTGPINIGNPGE-------FTIRELAEIVLEVTGSRSRLVHRPLPPDDPKQR 281 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K + + W PQ ++ +G+ +TV ++ Sbjct: 282 RP---DIAKARRILNWEPQVDLRAGIARTVAYF 311 >gi|117620017|ref|YP_855506.1| putative nucleotide sugar epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561424|gb|ABK38372.1| putative nucleotide sugar epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 337 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 37/347 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNL---- 51 M+ +VTG AGFIG + R L + QV+ +D NLN SLKE + L Sbjct: 1 MKYLVTGAAGFIGFHVARQLC-EAGHQVVGLD------NLNDYYEVSLKEARLAMLTPFP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F F+Q ++ D+ + + E + + +++ A++ V S+ + +N+ G +LE Sbjct: 54 HFRFVQGELADQAGMAALFAEGRFERVIHLGAQAGVRHSLENPFAYSESNLTGMLTVLEG 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVL 169 R + + S+ VYG ++ FS D + P S Y+ATK S + + Sbjct: 114 CR---------QHGIQHLIYASSSSVYGMGEQLPFSADQQVDHPVSLYAATKKSGELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 A+ YG+P YGP+ P+ I ++ G + +Y G RD+ +++D Sbjct: 165 AYSALYGLPTTGLRFFTVYGPWGRPDMAIAKFTRAILAGEPIDVYNQGDLSRDFTFIDDI 224 Query: 230 VRALYLVLK-KGRIGERYNIGGNNERKNIDI--VFEIGF-----LLDAL--IPKSYSHTE 279 V + V + R ++ G + ++ + IG LLD + + ++ Sbjct: 225 VEGILAVAELPPRPNPHWHAGEQSPAESAAPYRILNIGHGQPVRLLDFIEALEQALDKPA 284 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + R + + G DS + + G P +++ G+ V WYLD Sbjct: 285 IKRMLPMQAGDMHATWADSEPLHTLTGLRPATSIKEGVAAFVRWYLD 331 >gi|84489789|ref|YP_448021.1| GDP-D-mannose dehydratase [Methanosphaera stadtmanae DSM 3091] gi|84373108|gb|ABC57378.1| predicted GDP-D-mannose dehydratase [Methanosphaera stadtmanae DSM 3091] Length = 410 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 22/269 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TG +GF+G+ L L+ + ++ + T ++K N F+ + D+ D Sbjct: 8 VLITGISGFVGAYLAERLIKEGSNVYGLVRRRTDGSIPTNIKNHGIENDFTQITGDLTDI 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-------ETRLWW 115 + +A+ + +PD I + AA+S V +S + N GT LLE + R+ + Sbjct: 68 SSVANAIDKSEPDYIFHLAAQSFVPQSFDNPTDTEQNNSQGTNNLLEAMRIKDCDARMVF 127 Query: 116 SCLSQD------KKDQFRFLQISTDEVYGSLDKGL-----FSEDMPYNPSSPYSATKASS 164 + S++ KDQ+ ++ + +G+ SE P P SPY+ +K Sbjct: 128 AGSSEEYGLVISSKDQYNAALKQYGSIFPDIKEGITHELPISETNPLRPMSPYAVSKVYG 187 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYGDGQNV 220 D+L + H+YG+ ++S N+ G F ++ + ++ G + G+ Sbjct: 188 DFLTRNYYHSYGLDTVVSRAFNHEGAGRGKMFVTSVVTNQVIQLKLGLTDKITIGNVNAF 247 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIG 249 RDW ++ED + L+ KKG G+ YN G Sbjct: 248 RDWTHIEDIINGYLLLAKKGNSGDVYNQG 276 >gi|83591593|ref|YP_425345.1| GDP-mannose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] gi|83574507|gb|ABC21058.1| GDP-mannose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] Length = 356 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 18/248 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQVD 58 ++TG G G+ L +L+ +V I + + + N + + Q F D Sbjct: 7 LITGVTGQDGAYLAEFLLGK-GYEVHGIKRRSSSLNTGRIDPLYQDPHDPDRTFFLHYGD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++ QPD I N AA+SHV S + + +GT LLE RL Sbjct: 66 MTDSANLIGLVQAIQPDEIYNLAAQSHVQVSFEIPEYTANADAVGTLRLLEAIRLLGLT- 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ RF Q ST E+YG + + SE P+ P SPY+A K + ++ + + YGI Sbjct: 125 -----DKTRFYQASTSELYGKVRETPQSETTPFYPRSPYAAAKLYAYWITVNYREAYGIH 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-----VFLYGDGQNVRDWLYVEDHVRAL 233 N+ P E + ITR + H V G+ + RDW + D+V+ + Sbjct: 180 ASNGILFNHESPLR-GETFVTRKITRAVAAIHLGLQDVLYLGNLDSWRDWGHARDYVKGM 238 Query: 234 YLVLKKGR 241 + +L++ R Sbjct: 239 WAMLQQPR 246 >gi|209551573|ref|YP_002283490.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537329|gb|ACI57264.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 327 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 52/330 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +C+ L + V D L+ G+ +S++ ++ D+ D Sbjct: 5 ILVTGGAGFIGSHICKTLSRAGMVPV-TYDNLS-TGHADSVR------WGPLIRADLADA 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R L EF PD +++ A ++V S+ ++ N++G+ LLE +CL QD Sbjct: 57 ATLRRTLAEFSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLE------ACLDQDI 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ YG E+ P +P +PY TK + + + YGI Sbjct: 111 D---RIVFSSSCATYGVPASLPIREETPQHPVNPYGRTKLIFEMALEDFAAAYGIRFAAL 167 Query: 183 NCSNNYGP--------YHFPEK-LIP---LAITRMIEGSHVF----LYGDGQNVRDWLYV 226 N G H PE LIP LA +E VF DG VRD+++V Sbjct: 168 RYFNAAGADPDGELAERHHPETHLIPRALLAAAGRLERLDVFGTDYPTEDGTCVRDYIHV 227 Query: 227 ED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D H+ A+ ++ G N+G G + R+ ++ ++ ++ Sbjct: 228 SDLAQAHLAAVNHLMADGD-SLSVNLGSGRGTSVRQILEAIY-----------RATGREV 275 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 +R+ R G D++K ++E+G+ P Sbjct: 276 PVRYRPRRAGDPPILFADTAKARAELGFAP 305 >gi|283781944|ref|YP_003372699.1| UDP-glucose 4-epimerase [Pirellula staleyi DSM 6068] gi|283440397|gb|ADB18839.1| UDP-glucose 4-epimerase [Pirellula staleyi DSM 6068] Length = 327 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 56/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MRL+V GGAG++GS R L +V V D L S S + + + Sbjct: 1 MRLLVIGGAGYVGSHGVRVL-EGAGHEVWVYDNL-------SRGHRSAARADRLIVGSLH 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S L++ Q DA++++AA + V S+ + N+IG++ LLE R Sbjct: 53 DQPLLESVLRDRQIDAVLHYAAFALVGESVGNPAMYYHNNVIGSYHLLEAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + ST ++G +K +E P P +PY TK + ++ + YG+ + Sbjct: 105 -ASGVQNLIFSSTTAIFGEPEKTPIAEHFPKQPINPYGFTKLVMERMLDDYAQAYGMSFV 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIP+ + + + + +YG DG +RD++ Sbjct: 164 ALRYFNAAGAHPSGEIGEDHTPESHLIPIVLQVALGQREKITIYGNDYPTLDGTCIRDYI 223 Query: 225 YVEDHVRALYLVLKKGRIGE--RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +V+D A L L G+ + N+G G++ ++ ID + H Sbjct: 224 HVDDLADAHLLALDHFAPGKGLKLNLGTGRGHSVKEVIDCCRAV-----------TGHPI 272 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 E RPG D + K +GW P+ N T+ ++ W W Sbjct: 273 QAEVGERRPGDPSALVADPTLAKKTLGWQPRYN-------TLLPIVETAWNWH 318 >gi|238027116|ref|YP_002911347.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1] gi|237876310|gb|ACR28643.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1] Length = 343 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 35/333 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV D VL +D Y G +++ + + F L+ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVADGH-DVLCVDNF-YTGTKDNIAHLRDCDNFELLRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDQIYNLACPASPIHYQHDPVQTTKTSVHGAINM----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R Q ST EVYG ED P P + Y K ++ L + + +G Sbjct: 109 KRVKARIFQASTSEVYGDALVHPQKEDYWGHVNPLGPRACYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + ++G + LYGDG R + YV+D + A Sbjct: 169 LQIRIARIFNTYGPRMHPADGRVVSNFMMQALQGEPLTLYGDGSQTRSFCYVDDMIDAFV 228 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G +E I L + P L D P H + Sbjct: 229 RLMNLDEDPGGPVNLGNPHEVTMRATAERIVALTGSASP-----IVLHPLPVDDPWHRQ- 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D ++ ++ +GW P +++ GL T ++ D Sbjct: 283 --PDIARAQALLGWRPGTSLDEGLAATARYFRD 313 >gi|93115463|gb|ABE98424.1| GDP-D-mannose dehydratase [Escherichia coli] gi|307340788|gb|ADN43850.1| Gmd [Escherichia coli] Length = 373 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 + ++TG G GS L +L+ D +V I + N N + I Q F Sbjct: 4 KALITGITGQDGSYLAEFLL-DKGYEVHGIKRRASLFNTNRIDHIYQDLHHEKQSFFLHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D I ++E QPD I N A+SHV S + + IGT LLE R+ Sbjct: 63 GDLTDSLNIVRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAIGTLRLLEAIRI--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + K RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 120 CGLEKKT---RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I A+ + G LY G+ +RDW + +D+VR Sbjct: 177 IYACNGILFNHESPRRGETFVTRKITRALANIAYGLEPCLYLGNMDALRDWGHAKDYVRM 236 Query: 233 LYLVLKK 239 +L+L++ Sbjct: 237 QWLMLQQ 243 >gi|77919403|ref|YP_357218.1| UDP-glucose 4-epimerase [Pelobacter carbinolicus DSM 2380] gi|77545486|gb|ABA89048.1| UDP-galactose 4-epimerase [Pelobacter carbinolicus DSM 2380] Length = 324 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 48/331 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + + L I V + D L+ G+ ++K + D+ Sbjct: 1 MNILVCGGAGYIGSHMVKMLTASGHI-VTIFDNLS-TGHREAVK------WGKLVVGDLL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R E DA+++F+A+S V S+ + N+IGTF LLE R Sbjct: 53 DEAALRQLFAENSFDAVMHFSAKSLVGESVAQPAMYYKNNVIGTFNLLEAMR-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D RF+ S+ +G+ E+ P P +PY TK ++++ + YG+ + Sbjct: 105 -AADVKRFVFSSSAATFGNPVADRIDENHPQAPINPYGETKLMVEHMLRDYAAAYGLSSV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEGSHVF-LYG------DGQNVRDWL 224 ++ S G H PE LIP + ++ ++G DG VRD++ Sbjct: 164 SLRYFNAAGADPSGEIGEAHDPETHLIPNILKAALDPHKTLKVFGQDYPTPDGTCVRDYI 223 Query: 225 YVEDHVRALYLVL-----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++ D +A L L G G +N+G +FEI + + + Sbjct: 224 HINDLCQAHLLALGYMDNNDGAFG--FNLGNGQGFS----IFEINNAAECVTGGEIQYES 277 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R RPG D++ K E+ W PQ Sbjct: 278 CDR----RPGDPPILVADATLAKKELKWRPQ 304 >gi|167580722|ref|ZP_02373596.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia thailandensis TXDOH] Length = 337 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 149/332 (44%), Gaps = 34/332 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVI----DKLTYAGNLNSLKEISQSNLFSFLQV 57 R+++TG G +GS L +L+ + ++ + L +L L I++ N + Sbjct: 4 RVLITGITGMVGSHLADFLLENTDWEIYGLCRWRSPLDNVSHL--LPRINEKNRIRLVYG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I A+K+ PD + + AA+S+ S + + TN+ GT +LE Sbjct: 62 DLRDYLSIHEAVKQSAPDFVFHLAAQSYPKTSFDSPLDTLETNVQGTANVLE-------A 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L ++ D + S+ EV+G + +K E+ ++P+SPY+ +K +D + + Y Sbjct: 115 LRKNNIDAITHVCASS-EVFGRVPREKLPIDEECTFHPASPYAISKVGTDLIGRYYAEAY 173 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + V+ + + GP F E I + G V G+ ++R + V D V Sbjct: 174 NMTVMTTRMFTHTGPRRGDVFAESTFAKQIAMIERGLIPPVVKTGNLDSLRTFADVRDAV 233 Query: 231 RALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 RA Y+++ I G YNIGG +G +LD LI S S ++IR D Sbjct: 234 RAYYMLVTVNPIPGAYYNIGGTYS-------CTVGQMLDTLISMSTSK-DVIRVETDPER 285 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 RP ++ K ++ GW P+ + E + Sbjct: 286 LRPIDADLQVPNTRKFEAVTGWKPEISFEKTM 317 >gi|160888171|ref|ZP_02069174.1| hypothetical protein BACUNI_00579 [Bacteroides uniformis ATCC 8492] gi|270297070|ref|ZP_06203269.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478931|ref|ZP_07938078.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] gi|156862306|gb|EDO55737.1| hypothetical protein BACUNI_00579 [Bacteroides uniformis ATCC 8492] gi|270273057|gb|EFA18920.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316904908|gb|EFV26715.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] Length = 311 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 43/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V+GGAGFIGS LC L+ND QV+ +D L + G+ ++ + + F F+ D+ Sbjct: 3 KILVSGGAGFIGSHLCTRLINDGH-QVICLDNL-FTGSEGNITHLKSNPRFEFVLHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E D I N A + A + I T+++G + L Sbjct: 59 -----ETPYEADVDEIYNLACPASPIHYQYDAIKTIKTSVLGAI----------NMLGLA 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 KK + LQ ST EVYG D + + Y NP S Y K ++ L + + Sbjct: 104 KKTNAKILQASTSEVYG--DPVIHPQVESYWGNVNPIGLRSCYDEGKRCAETLFMDYHRQ 161 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ + + N YGP P +++ + + ++ + +YG G R + YV+D + Sbjct: 162 NGVRIKIIRIFNTYGPRMLPNDGRVVSNFVVQALQNQDITIYGSGNQTRSFQYVDDCIEG 221 Query: 233 LYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + ++ + IG N+G NE F I L + +I + S ++LI + P Sbjct: 222 MVRMMNTEDDFIGP-VNLGNPNE-------FSILELAEKVIRLTNSKSKLI--FKPLPHD 271 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ D + K ++GW P +E GL + ++ Sbjct: 272 DPKQRQPDITLAKEKLGWEPTIELEEGLQYIIEYF 306 >gi|325687949|gb|EGD29969.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK72] Length = 333 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D L G+ ++ + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVDNLV-TGHRAAIHPKA-----VFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ IR K DA+++FAA S V S++ + N G LLE + C Sbjct: 55 DKDFIRGVFAKHPSIDAVIHFAAFSLVAESMVDPLRYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 225 YVHPFDLAEAHILAVEHLRAGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARKVLGWKPKFDNIETIIETAWKWH 322 >gi|99081323|ref|YP_613477.1| GDP-mannose 4,6-dehydratase [Ruegeria sp. TM1040] gi|99037603|gb|ABF64215.1| GDP-mannose 46-dehydratase [Ruegeria sp. TM1040] Length = 373 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 R ++TG G GS L +L+ +V I + + N + + I Q F Sbjct: 4 RALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTSRIDHIYQDPHTDRARFKLHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L+E +PD + N A+SHV S + + IGT LLE R Sbjct: 63 GDLADTSNLTRILREVEPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L ++K RF Q ST E+YG + + E P++P SPY+ K + ++ + + YG Sbjct: 120 -LGLEQKT--RFYQASTSELYGLVQETPQRETTPFHPRSPYAVAKMYAYWITVNYREAYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + +G LY G+ ++RDW + +D+VR Sbjct: 177 LYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEPCLYMGNIDSLRDWGHAKDYVRM 236 Query: 233 LYLVLKK 239 +++L++ Sbjct: 237 QWMMLQQ 243 >gi|229153424|ref|ZP_04281602.1| UDP-glucose 4-epimerase [Bacillus cereus m1550] gi|228630028|gb|EEK86679.1| UDP-glucose 4-epimerase [Bacillus cereus m1550] Length = 330 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 43/326 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++ GGAG+IGS + LV D + V+V+D L G+ +++ E ++ F D+ D+ Sbjct: 4 ILICGGAGYIGSHAVKKLV-DEGLSVVVVDNLQ-TGHEDAITEGAK-----FYNGDLRDK 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R K+ +A+++FAA+S V S+ ++ N+ G LLE + + K Sbjct: 57 SFLRDVFKQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLE-------VMDEFK 109 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----- 177 D+F F ST YG +D L +E+ NP++ Y TK + + ++ + + Sbjct: 110 VDKFIFS--STAATYGEVDVDLITEETTTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167 Query: 178 ---PVLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 V + + G H PE LIPL + + + + ++G DG +RD+++V Sbjct: 168 RYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 Query: 227 EDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 ED V A +L LK G + YN+G N F + ++DA + + +H Sbjct: 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNG-------FSVKEIVDA-VREVTNHEIPAEV 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G R S K K ++GW P Sbjct: 280 APRRAGDPARLVASSKKAKEKLGWDP 305 >gi|256763403|ref|ZP_05503983.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|256684654|gb|EEU24349.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] Length = 330 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVIVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|188583802|ref|YP_001927247.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179347300|gb|ACB82712.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 333 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 47/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G+ ++L + + F ++ D+ Sbjct: 4 RILVTGGAGFVGSHLCDRLVAQGH-DVLAVDNF-YTGDRSNLAQHLSNPRFEVMRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++IG + L Sbjct: 60 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVIGAI----------NML 101 Query: 119 SQDKKDQFRFLQISTDEVYGSLD--------KGLFSEDMPYNPSSPYSATKASSDYLVLA 170 K+ LQ ST E+YG D +GL S P + Y K ++ L Sbjct: 102 GLAKRLGIPILQASTSEIYGDPDVHPQPEDYRGLVSVS---GPRACYDEGKRCAETLFFD 158 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + + +P+ ++ N YGP + +++ + + + G + LYGDG+ R + +V+D Sbjct: 159 YQRRHNVPIRVARIFNTYGPRMNRDDGRVVSNFVVQALRGEPITLYGDGRQTRAFCFVDD 218 Query: 229 HVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V L ++ +G + N+G E + + S S +D Sbjct: 219 LVEGLMRLMNVEGTLDGAVNLGNPTE-----VTIAAIAERIIALTGSRSEIVYRPLPQDD 273 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P R+ D ++ K+ + W P+ ++++GL KT+ ++ Sbjct: 274 P---RQRCPDITRAKAMLHWSPKVDLDAGLTKTIAYF 307 >gi|312908463|ref|ZP_07767418.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|310625567|gb|EFQ08850.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|315029006|gb|EFT40938.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4000] Length = 319 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|78223533|ref|YP_385280.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens GS-15] gi|78194788|gb|ABB32555.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens GS-15] Length = 336 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 45/347 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 ++VTG AGFIG L + L+ +V+ +D L Y NL + L+++ F F++ Sbjct: 4 VLVTGAAGFIGFHLSQRLLARGD-RVVGLDNLNDYYDVNLKLDRLRQLEGREGFRFIRAS 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + + DA+VN AA++ V S+ ++ +N++G +LE C Sbjct: 63 LADRPALEELFSGERFDAVVNLAAQAGVRYSLKNPHAYVESNLVGFMNILE------GCR 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 K + S+ VYG+ FS + P S Y+ATK +++ + + YG+ Sbjct: 117 HHGVK---HLVYASSSSVYGANTAMPFSVHHNVDHPVSLYAATKKANELMAHTYSSLYGL 173 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ + L ++EG + +Y G+ RD+ Y++D V + V+ Sbjct: 174 PTTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVYNHGKMQRDFTYIDDIVEGVMRVM 233 Query: 238 KKGRIGER--------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 R E YNIG N+ + + + I K Sbjct: 234 D--RTAEPNPSWSGDHPDPGTSYAPYRIYNIGNNSPVELLTFI--------ETIEKCIGK 283 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ + G D + +++G+ P + G+ + V WY Sbjct: 284 PAEKNFLPIQAGDVPATYADVDDLMNDVGFKPATPIGEGIRRFVEWY 330 >gi|312863821|ref|ZP_07724059.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] gi|311101357|gb|EFQ59562.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] Length = 333 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 54/350 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEAGQEKVVVVDNLV-TGHRAAVHPDA-----VFYEGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R+ KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRNVFKE-NPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQ 218 GI P+ N + + G H PE L+P+ I ++ +G + ++G DG Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGDDYNTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 NVRD+++ D A L L+KG +N+G + N+ I+ + IP Sbjct: 221 NVRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEK 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 281 A--------DRRPGDPDTLIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|297797753|ref|XP_002866761.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297312596|gb|EFH43020.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 366 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/322 (25%), Positives = 140/322 (43%), Gaps = 23/322 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 +VTG G GS L +L+ + QV + + + N + I + L Sbjct: 25 LVTGITGQDGSYLTEFLL-EKGYQVHGLIRRSSNFNTQRINHIYVDPHNANKALMKLHYA 83 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L +PD + N AA+SHV S D G LLE R Sbjct: 84 DLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR----S 139 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + D ++ Q + E++GS SE P++P SPY+A+K ++ + + + YG+ Sbjct: 140 HNIDNGRAIKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGL 198 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + D+V A Sbjct: 199 YACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEA 257 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + + E ++ E+ F L K + + F RP Sbjct: 258 MWLMLQQEKPDDY--VVATEESHTVEEFLEVSFGYVGLNWKDHVEIDKRYF---RPTEVD 312 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 D+SK K +GW P+ E Sbjct: 313 NLKGDASKAKEMLGWKPKVGFE 334 >gi|237712215|ref|ZP_04542696.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265751908|ref|ZP_06087701.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229453536|gb|EEO59257.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236700|gb|EEZ22170.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 312 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 147/334 (44%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+ + I V+ +D + G+ ++ ++ F ++ DI Sbjct: 3 RILVTGGAGFIGSHLCTRLIEEGNI-VICLDNF-FTGSKENISYLTGHPRFELIEHDI-- 58 Query: 62 RECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + F D I N A + A + T + GTF + L Sbjct: 59 -------INPFWTDVDEIYNLACPASPIHYQHDAIKTAKTAVFGTF----------NMLG 101 Query: 120 QDKKDQFRFLQISTDEVYGS-----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K+++ + LQ ST EVYG +G + P S Y K ++ L + + Sbjct: 102 LAKRNKAKILQASTSEVYGDPLSHPQREGDWGNVNPIGYRSCYDEGKRCAETLCMDYYRQ 161 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ V + N YGP + ++I + + ++ + +YGDG+ R + Y++D V Sbjct: 162 HGVLVKIIRIFNTYGPNMLTDDGRVISNFVVQALQDKDITIYGDGKQTRSFQYIDDLVEG 221 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ + NIG E F I L ++ + SH+ +I E P D Sbjct: 222 MMRMMATEDHFTGPVNIGNPCE-------FSIFELAQKILELTCSHSNII--FEPLPHDD 272 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + + ++ W P ++E GL K + ++ Sbjct: 273 PRQRRPDITLAREKLDWEPHIHLEEGLTKVIDYF 306 >gi|220925453|ref|YP_002500755.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219950060|gb|ACL60452.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 330 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+ +VL +D + G + + + + F L+ D+ Sbjct: 3 RILVTGGAGFIGSHLCERLLKQGN-EVLCVDNF-FTGTRANCEPLLGNPSFELLRHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T+++G + L Sbjct: 59 -----TFPLYVEVDEIYNLACPASPIHYQRDPV---QTTKTSVMGAINM----------L 100 Query: 119 SQDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG D +G P + Y K ++ L + Sbjct: 101 GLAKRLRVRILQASTSEVYGDPDVHPQPEGYCGYVNIAGPRACYDEGKRCAETLFYDYQR 160 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + + V ++ N YGP+ P+ +++ I + + + +YGDG R + YV+D V Sbjct: 161 QHRMSVRIARIFNTYGPHMHPQDGRVVSNFIIQALTHQPITIYGDGSQTRSFCYVDDLVE 220 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 L L+ G N+G E + + I L + S S +D P Sbjct: 221 GLLRLMALDEEPGGAVNLGNPVETTVLALAERIVALCN-----SRSTITCHPLPQDDP-- 273 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D S+ + + W P+ ++SGL +T+ ++ Sbjct: 274 -RRRCPDISRARDLLHWAPRVELDSGLTRTIAYF 306 >gi|163743523|ref|ZP_02150901.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis 2.10] gi|161383226|gb|EDQ07617.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis 2.10] Length = 336 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 144/333 (43%), Gaps = 22/333 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV--DI 59 ++TG AGFIG L L+ +V+ +D L+ Y L + + F+ + + Sbjct: 5 LITGSAGFIGYHLADRLLA-AGWRVIGLDCLSPYYDVRLKECRHARLAEHPGFMPIIGKL 63 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + +PDA+++ AA++ V SI +++ N+IGTF LLE R Sbjct: 64 EDPDRLMGLFATHKPDAVIHLAAQAGVRHSIDAPRDYLEANLIGTFELLEAAR------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYGIP 178 L ST YG+ + F E + S Y+ATK + + + ++ H YG+P Sbjct: 117 --AHPPAHMLIASTSSAYGANTQMPFDERQQADHQMSFYAATKKAGETMAHSYAHLYGLP 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY---- 234 + YGP+ P+ + M G + +Y G+ RD+ Y++D V + Sbjct: 175 TTMFRFFTVYGPWGRPDMALFKFTKAMQAGQPIDVYNHGRMSRDFTYIDDLVAGITGLID 234 Query: 235 LVLKKGRIGERYNIGGNNERKNIDI-VFEIGFLLD--ALIPKSYSHTELIRFIEDRPGHD 291 V + E+ N+ + ++I L+D A + + T +E + G Sbjct: 235 AVPGDQPVSEQDNLSPVAPFRVVNIGASRPTPLMDYIAALETALGITAQKNLMEMQAGDV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+S + G+ PQ +E G+ + V WY Sbjct: 295 PATWADTSLLSQLTGYEPQVPVEEGVARFVTWY 327 >gi|21221575|ref|NP_627354.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|256787233|ref|ZP_05525664.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|289771131|ref|ZP_06530509.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|8894770|emb|CAB95930.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|289701330|gb|EFD68759.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] Length = 321 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 48/334 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++LV + +V+V+D L+ +E + SF++ DI Sbjct: 4 KYLVTGGAGYVGSVVAQHLV-EAGHEVVVLDNLS-----TGFREGVPAGA-SFVEGDI-- 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + F D +++FAA S V S++ +++ N+ GT LLE R Sbjct: 55 RDAAKWLDGSF--DGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMR--------- 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 R + ST YG ++ E P P++PY A+K + D+++ +G+ + Sbjct: 104 GAGVRRLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVS 163 Query: 181 -----LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLYV 226 ++ YG H PE LIPL + ++ +G + +YG DG VRD+++V Sbjct: 164 LRYFNVAGAYGEYGERHDPESHLIPL-VLQVAQGRREAISVYGDDYPTPDGTCVRDYIHV 222 Query: 227 EDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L + GE N+G N ++V + + IP+ + Sbjct: 223 ADLAEAHLLAVAAAAPGEHLICNLGNGNGFSVREVVETVRRVTGHPIPE---------IM 273 Query: 285 EDRPGHDRRYAIDSSKIKSE-IGWFPQENMESGL 317 R G D + S+ E +GW P +G+ Sbjct: 274 APRRGGDPAVLVASAGTAREKLGWNPSRADLAGI 307 >gi|194335706|ref|YP_002017500.1| GDP-mannose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] gi|194308183|gb|ACF42883.1| GDP-mannose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] Length = 380 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 33/295 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + E QPD + N A+SHV S + + +GT LLE R Sbjct: 72 DLTDSSNLTRIISEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRF---- 127 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E++G + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 128 LGLEKKS--RFYQASTSELFGLVQEIPQRESTPFYPRSPYAVAKLYAYWITVNYREAYGM 185 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S+ G F + I ++ + +G LY G+ +RDW + +D+VR Sbjct: 186 YACNGILFNHESSRRGET-FVTRKITRSLANITQGLEECLYVGNMNALRDWGHAKDYVRM 244 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDI----------VFEIGFLLDALIPKSY 275 +++L++ + G +Y++ E+ + + E+G + I S Sbjct: 245 QWMMLQQEQPKDFVIATGVQYSVRQFIEKSAAQLGITIRWEGTGINEVGIVDSLSIQHSA 304 Query: 276 SHTELIRFIED----RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 T + D RP D +K K+++GW P+ ++ + + V + LD Sbjct: 305 LSTGSVIVRVDPRYFRPAEVETLLGDPAKAKADLGWVPEITLDETVEEMVAYDLD 359 >gi|305632921|dbj|BAJ16176.1| GDP-mannose 4,6-dehydratase [Nicotiana tabacum] Length = 367 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 17/264 (6%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L PD + N AA+SHV S D G LLE R S Sbjct: 83 ADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR---S 139 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +S + R+ Q + E++GS SE P++P SPY+ +K ++ + + + YG Sbjct: 140 HISATGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAVSKCAAHWYTVNYREAYG 198 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 I +L ++ S G +F + I A+ R+ G S +FL G+ Q RDW + D+V Sbjct: 199 IFACNGILFNHESPRRGE-NFVTRKITRAVGRIKIGLQSKLFL-GNLQASRDWGFAGDYV 256 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++++L++ + + + E ++ E+ F L K + + F RP Sbjct: 257 EAMWMMLQQEKPDDY--VVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYF---RPTE 311 Query: 291 DRRYAIDSSKIKSEIGWFPQENME 314 DSSK ++ +GW P+ E Sbjct: 312 VDNLKGDSSKARNVLGWKPRVGFE 335 >gi|282848995|ref|ZP_06258384.1| UDP-glucose 4-epimerase [Veillonella parvula ATCC 17745] gi|282581270|gb|EFB86664.1| UDP-glucose 4-epimerase [Veillonella parvula ATCC 17745] Length = 329 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 61/368 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVKFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE +++FAA S V S+ + N++G++ L+E R Sbjct: 54 DPKLV-GIMKEHNILGVMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIK--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ ST VYG ED P++ Y TK + ++ + YG + Sbjct: 110 ------HFVFSSTAAVYGEPKVVPIREDAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + H+ ++G DG VRD++ Sbjct: 164 ALRYFNAAGADPSGMIGEDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D A L L+KG + +N+G N GF + +I + T + Sbjct: 224 HVNDLATAHVLAMDYLRKGGESQVFNLGSGN-----------GFSVKEIIETAKEVTGID 272 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +++ + R G S KIK+ +GW P+ + V + + W W + Sbjct: 273 IPVQYGDRRAGDPGTLIASSEKIKNLLGWDPKFS-------NVADVIKDAWHWHTSH--- 322 Query: 339 KPDNDYSK 346 PD SK Sbjct: 323 -PDGFSSK 329 >gi|149196245|ref|ZP_01873300.1| Nucleoside-diphosphate-sugar epimerase [Lentisphaera araneosa HTCC2155] gi|149140506|gb|EDM28904.1| Nucleoside-diphosphate-sugar epimerase [Lentisphaera araneosa HTCC2155] Length = 314 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/342 (26%), Positives = 152/342 (44%), Gaps = 55/342 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TG +G IG+ L L+ D ++ IDK T+ +L ++ + S +F Sbjct: 4 RILITGISGQIGTNLAYNLI-DKGFEIFGIDKRQNTWTNDLTTVHQDLSSRYDNFTDGLG 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT---NIIGTFILLEETRLWWS 116 C L + D +++ AA + V + E+ T N + TF ++E R Sbjct: 63 C--------LDYGKVDLVIHLAANAKVHELV----EYPTRALDNFMMTFNMIEYCR---- 106 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPS-SPYSATKASSDYLVLAWGHT 174 + + ST EVYG + + + +E D ++ + SPYSA+K S + + ++ Sbjct: 107 ------NNNIPIIYSSTREVYGDIQRYITNEADASFHTTESPYSASKISGEAFLYSYSKC 160 Query: 175 YGIPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+P + SN YG Y E++IPL ++ G + +YG+ + V D+ YV+D V Sbjct: 161 YGLPYICYRFSNVYGRYDNDIERMERVIPLFYEKIKNGEPITIYGEDK-VLDFTYVDDCV 219 Query: 231 RALYLVLKKGRIGERYNI------GGNNERKNIDIVF--EIGFLLDALIPKSYSHTELIR 282 + + K GE N G N + + VF E+G D + Sbjct: 220 AGISSGVDKILTGEVQNKTFNLAHGSGNPLRTVADVFQEELGVKAD------------LS 267 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F R G Y D S K +G+ PQ ++ +GL K WY Sbjct: 268 FEPSRVGEVTHYVADISSAKKYLGYEPQTDLVNGLRKAAAWY 309 >gi|55823311|ref|YP_141752.1| UDP-glucose 4-epimerase [Streptococcus thermophilus CNRZ1066] gi|52001502|gb|AAU21555.1| GalE [Streptococcus thermophilus] gi|55739296|gb|AAV62937.1| UDP-glucose 4-epimerase [Streptococcus thermophilus CNRZ1066] Length = 333 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|239930015|ref|ZP_04686968.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC 14672] Length = 322 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 32/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGF+GS LC L+ + +V+ +D G+ ++ ++ + F ++ D+C+ Sbjct: 1 MVAGGAGFVGSHLCERLLTN-GWRVVCVDNFV-TGSARNVAHLAGESRFRLIEADVCEGP 58 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + DA++N A+ + + E + GT LL+ R Sbjct: 59 PPITG----RVDAVLNLASPASPVDYLELPLETLRVGSEGTRHLLDLAR----------A 104 Query: 124 DQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ ST E YG + + P P S Y K ++ L +A+ T+G+ Sbjct: 105 EGARFVLASTSETYGDPLVHPQPESYWGNVNPVGPRSVYDEAKRYAEALTMAYRRTFGVD 164 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P I + + + + GDG R YV D V L + Sbjct: 165 TGIVRIFNTYGPRMRAHDGRAVPTFIRQALAHEPITVAGDGSQTRSLCYVSDLVDGL-VR 223 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + R+ N+G E V + + L + + R ++D P R Sbjct: 224 MTDARLAGPLNLGDQEEIP----VLRLAEWIRDLTASTSGIVHVPRPVDD-PSVRR---P 275 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ + E+GW P+ + E GL +T+ W+ Sbjct: 276 DITRAREELGWSPEFSTERGLIETIDWF 303 >gi|261366868|ref|ZP_05979751.1| GDP-mannose 4,6-dehydratase [Subdoligranulum variabile DSM 15176] gi|282570980|gb|EFB76515.1| GDP-mannose 4,6-dehydratase [Subdoligranulum variabile DSM 15176] Length = 362 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TG G GS L +L+ V + + + + + + F D+ D Sbjct: 3 KALITGVTGQDGSYLAEFLIEK-GYDVHGMIRRSSVDYRERIAHLEGNPQFHLHYGDLGD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL--LEETR---LWWS 116 + + E +PD I N AA+SHV S E+ T +++ T +L LE R L + Sbjct: 62 SISLVKIISEVRPDEIYNLAAQSHVQVS-FDVPEY-TADVVATGVLRVLEAVRVCGLEKT 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C R Q ST E+YG +++ +E P++P SPY+ K ++V + Y Sbjct: 120 C---------RIYQASTSELYGKVEEVPQNEKTPFHPYSPYAVAKQYGFWIVKEYREAYN 170 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V Sbjct: 171 MYCCSGILFNHESERRGE-TFVTRKITLAAARIAQGKQDKLYLGNLSSLRDWGYAKDYVE 229 Query: 232 ALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++L+L++ + GE++++ + ++ E+ F + + K I Sbjct: 230 CMWLILQQDKPDDFVIATGEQHSVREFCQLAFHEVGIELEFQGEGMEEKGIDKATGKVLI 289 Query: 285 EDRPGHDRRYAI-----DSSKIKSEIGWFP 309 E P R + D +K K+E+GW P Sbjct: 290 EVSPDFYRPTDVVNLWGDPTKAKTELGWNP 319 >gi|218296663|ref|ZP_03497381.1| GDP-mannose 4,6-dehydratase [Thermus aquaticus Y51MC23] gi|218242976|gb|EED09509.1| GDP-mannose 4,6-dehydratase [Thermus aquaticus Y51MC23] Length = 349 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 24/331 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV 57 R ++TG G GS L L++ +V I + + N + + ++ + + FL Sbjct: 3 RALITGVTGQDGSYLAELLLSK-GYEVHGIIRRSSVFNTSRIDHLYRDPHEPDTRFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R L++ QPD I N A+SHV S + GT LLE R + Sbjct: 62 GDLTDGTGLRRILEKVQPDEIYNLGAQSHVKVSFEQPEYTADVVATGTLRLLEAVRDYVR 121 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q + E++G+ +E P+ P SPY+A+K ++ + + + YG Sbjct: 122 AWGR----PVRFYQAGSSEMFGAAPPPQ-NEKTPFYPRSPYAASKVAAYWYAVNYREAYG 176 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I A R+ G LY G+ + RDW Y D+V Sbjct: 177 LFIVNGILFNHESERRGE-TFVTRKITRAAGRIKMGLQKKLYLGNLEAKRDWGYAPDYVE 235 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-IRFIEDRPGH 290 A++L+L++ + + E ++ E F L L P Y+H E+ R+ RP Sbjct: 236 AMWLMLQQPEPDD--YVLATGEAHSVREFLEEAFGLLGLDP--YAHVEIDPRYF--RPTE 289 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 D+SK + ++GW P+ + + + V Sbjct: 290 VDFLLGDASKAREKLGWQPRVTFKELVRRMV 320 >gi|295135095|ref|YP_003585771.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zunongwangia profunda SM-A87] gi|294983110|gb|ADF53575.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zunongwangia profunda SM-A87] Length = 318 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 27/331 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS--QSNLFSFLQ 56 M +TG AGFIGS L L+ L QV ID L Y NL K ++ Q F + Sbjct: 1 MHFFITGAAGFIGSNLSLALL-QLGHQVTGIDNLNDFYDVNLKK-KNLTDLQKKFIDFYK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+C++ + L D +++ AA+ +D + ++ N I T LLE Sbjct: 59 VDLCEKSELEQ-LPVHNIDFVIHLAAQPGLDPHT-SFNSYLQNNTIATHNLLE------Y 110 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + K F+ IST VYG +G E P S Y TK +++ L L++ Sbjct: 111 CENFHAKHLKLFINISTSSVYGLTAQG--DEQQVPQPVSYYGVTKLAAEQLALSYFRNEM 168 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYL 235 +PV + YGP +K+ P I + + LY G +++R + YVED V + Sbjct: 169 LPVCSLRLFSVYGPRERNDKMFPKLIAAALLQTSFHLYSGSLEHIRSFTYVEDIVEGIKK 228 Query: 236 VLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ + GE N+G N V E L++ L S ++ + R G + Sbjct: 229 LIENYENCYGEIINLGSNETY----TVKECIHLVENLTHSSIH----LKQLPARNGDQKS 280 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K IG+ P ++SG+ + + ++ Sbjct: 281 TKAQIEKAGRLIGFKPATTLQSGIKQQIQFF 311 >gi|256852723|ref|ZP_05558093.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|256711182|gb|EEU26220.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] Length = 329 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|254785536|ref|YP_003072965.1| UDP-glucuronate 5'-epimerase [Teredinibacter turnerae T7901] gi|237687253|gb|ACR14517.1| UDP-glucuronate 5'-epimerase [Teredinibacter turnerae T7901] Length = 333 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 145/347 (41%), Gaps = 39/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIG+A + LV D V +D L A + L+++ + + Sbjct: 1 MKYLVTGSAGFIGAATAKRLV-DEGHDVFGLDNLNSYYDPALKHHRLEKLLPCENYHQVT 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + + +++ A++ V SI E+I N++GT +LE R Sbjct: 60 MDLADREGVAKLFANEKFQRVIHLGAQAGVRHSINAPFEYIDGNVVGTMTILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG K F+E D +P S Y+ATK S++ + A+ + Y Sbjct: 116 -----HNNVEHLIYASSSSVYGMNPKVPFAESDNVDHPVSLYAATKKSNELMAHAYSNLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YGP P+ L +++G + ++ G+ RD+ Y++D V + Sbjct: 171 DIPTTGLRFFTVYGPAGRPDMAPWLFTEAILKGEPIKVFNKGKMQRDFTYIDDIVEGILR 230 Query: 236 VL---------------KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 + R R YNIG NN E+ +DA+ E Sbjct: 231 IQNVIPTPNPDDEGSNPSTSRAPYRIYNIGNNNP-------VELATFIDAIEQACGKKAE 283 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I + + G R D + P ++ G+ + V WY D Sbjct: 284 KI-LLPMQAGDVVRTYADIDALTKATQHKPAVDIYDGVVQFVNWYKD 329 >gi|126465202|ref|YP_001040311.1| NAD-dependent epimerase/dehydratase [Staphylothermus marinus F1] gi|126014025|gb|ABN69403.1| NAD-dependent epimerase/dehydratase [Staphylothermus marinus F1] Length = 320 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 17/251 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L L++ V VID L+ +G+L +++ F F++ D+ + Sbjct: 4 RILVTGGAGFIGSHLVDELLSR-GYYVRVIDNLS-SGSLRNIQHHMGEKNFDFVKGDLKN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I ++LK+ DA+ + AA V S + NI+ TF LLE R Sbjct: 62 IDDINNSLKDI--DAVFHLAANPEVRLSTTSPEIHFRENIVATFNLLEAIR--------- 110 Query: 122 KKDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + L S+ VYG E P S Y A+KA+ + L+ ++ H YG L Sbjct: 111 RNGGVKVLVFASSSTVYGDPQIIPTPETHEIRPISVYGASKAACESLICSYAHLYGFKAL 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRA-LYLVLK 238 +N GP +I I ++ + + GDG + +LYV+D V A LY+ + Sbjct: 171 SLRYANIVGP-RLNHGVIYDFILKLKRNPEILEVLGDGTQKKSYLYVKDAVDATLYVFER 229 Query: 239 KGRIGERYNIG 249 + + YNIG Sbjct: 230 INKTYDVYNIG 240 >gi|108805896|ref|YP_645833.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108767139|gb|ABG06021.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 322 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 47/337 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGFIGS LC LV++ V+ +D L G+L ++ + F ++ D+ Sbjct: 7 RALVTGGAGFIGSHLCDRLVSE-GYAVVCMDNLR-TGSLRNIAHLRSEPRFEYVDHDVTS 64 Query: 62 RECIRSALKEFQPDAIVNFAAES------HVDRSILGADEFITTNIIGTFILLEETRLWW 115 + L D + +FA+ + + IL T N +G Sbjct: 65 YIRVPGRL-----DEVYHFASPASPKDFERIPIPILKVGALGTHNALG------------ 107 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLA 170 LS K RF+ ST EVYG ED P Y K ++ + +A Sbjct: 108 --LSLAKG--ARFMLASTSEVYGDPLVHPQPEDYWGNVNPIGVRGVYDEAKRYAEAITMA 163 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + +G+ + N YGP P+ ++IP I++ + G + +YGDG R Y++D Sbjct: 164 YHRHHGLDTRIVRIFNTYGPRMRPDDGRMIPNFISQALSGRPLTVYGDGSQTRSVQYIDD 223 Query: 229 HVRALYLVLKKGRIGERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V ++ ++ R ER + GN + V E+ L S + +D Sbjct: 224 LVEGIFRLM---RSEERRPVNIGNPVEYTVREVAELVLRLSG----SRAGISFRPLPKDD 276 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P ++ D ++ + +GW P+ E GL +T+ W+ Sbjct: 277 P---KQRCPDITRAREVLGWEPRVPAEEGLRRTLEWF 310 >gi|315147015|gb|EFT91031.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4244] Length = 319 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|284929423|ref|YP_003421945.1| UDP-galactose 4-epimerase [cyanobacterium UCYN-A] gi|284809867|gb|ADB95564.1| UDP-galactose 4-epimerase [cyanobacterium UCYN-A] Length = 330 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 58/354 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS + L+ +L++D L++ G+ ++++ L + D DR Sbjct: 6 ILVTGGAGYIGSHVA-LLLKKAGYNILILDNLSF-GHSEIVRDVLDVEL---IIGDTNDR 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+++FAA V S+ + N++GT LLE + Sbjct: 61 LLLDKIFATRNICAVMHFAAFLAVGESVHHPATYYKNNVVGTLTLLE---------AMVS 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + + + ST +YG + +E+ P NP +PY+++K + ++ + Y + ++ Sbjct: 112 ANINKLIFSSTCSIYGISNNIPITENHPNNPLNPYASSKYMVEQILKDFDQAYNLKSVVF 171 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ S + G H PE LIPLA +T + + H+ ++G DG +RD+++V Sbjct: 172 RYFNAAGADPSGDLGEDHTPEIHLIPLALLTALKKREHLVIFGTDYDTPDGTAIRDYIHV 231 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTE 279 D H+ L +L G + +N+G N R+ ID+V +I +D L+ + Sbjct: 232 SDLATAHILGLEYLLSGGS-SDMFNLGNGNGFSVREVIDVVKKITD-VDFLVKEG----- 284 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 + RPG KIKS++ W PQ ++E+ +D+ W W Sbjct: 285 -----KRRPGDAPILVGSGLKIKSKLNWKPQYPSLET--------IVDHAWKWH 325 >gi|260464155|ref|ZP_05812349.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259030140|gb|EEW31422.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 342 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 54/355 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQ 56 MR VTG AGFIG L R L+++ V D +T Y L + + + F F Sbjct: 1 MRYFVTGTAGFIGFHLARRLLDEGH-SVTGFDGMTPYYDVTLKQSRHALLQRYGAFRFHI 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D + +R A PD IV+ AA++ V SI + +N++G+F +LE Sbjct: 60 GQLEDMDALRRAADLANPDVIVHLAAQAGVRYSIDNPRSYTDSNLVGSFNVLE------- 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 L++D K + L ST VYG+ + F E D P + Y+ATK + + + ++ H + Sbjct: 113 -LARDLKPR-HLLIASTSSVYGANETTPFVETDQTDWPLTFYAATKKAVEAMSHSYSHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + + + G + +YG+G RD+ YV D V A+ Sbjct: 171 QVPTTSFRFFTVYGPWGRPDMALFKFVDAIENGRPIEIYGEGAMRRDFTYVGDLVEAIVR 230 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY---------SHTELIRFIED 286 ++ + + G + ++D L P + EL+ FIE Sbjct: 231 LIGCAPVCGQPVSGPD--------------VVDTLSPVAPWRVVNIGGGQPVELLSFIET 276 Query: 287 RPGHDRRYAI----------------DSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + AI D +++ G+ P+ ++E G+ V WYL Sbjct: 277 IENCLAKRAIRKSLPMQSGDMSVTYADPRLLQTLTGFRPETSVEDGVAAFVRWYL 331 >gi|326201707|ref|ZP_08191578.1| UDP-glucose 4-epimerase [Clostridium papyrosolvens DSM 2782] gi|325988307|gb|EGD49132.1| UDP-glucose 4-epimerase [Clostridium papyrosolvens DSM 2782] Length = 328 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L+ D K +V+V+D L L F+Q D+ Sbjct: 1 MAVLVTGGAGYIGSHTVAELL-DAKEEVVVLDNLEKGHREAVLGG-------KFIQADLR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + IR +E +A+++FAA V S+ ++ N+I + LL + + + Sbjct: 53 NIDEIRKVFRENDIEAVIHFAAYIEVGESVTNPLKYYNNNVIASLNLL-------TAMQE 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL----AWGHTYG 176 ++ F ST YG ++ E P +PY TK + + ++ A+G Y Sbjct: 106 AGVNKIVFS--STAATYGIPEEIPIKERDKTAPINPYGETKLTVEKILKWADDAYGIKYA 163 Query: 177 IPVLLSNC----SNNYGPYHFPEK-LIPLAITRMIEGS--HVFLYG------DGQNVRDW 223 + + C S G H PE LIP+ I ++ +G + L+G DG VRD+ Sbjct: 164 VLRYFNACGAHISGKIGEAHSPESHLIPI-ILQVAQGKREEIKLFGNDYNTKDGTCVRDY 222 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D +A L LK KG +N+G N ++V + A+ K+ + Sbjct: 223 IHVSDLAQAHVLALKNLRKGAESNTFNLGNGTGFSNREVV----EVARAVTGKNIKAADA 278 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 R RPG + K + +GW P+ N LNK V + W W + Sbjct: 279 PR----RPGDPDILVASAEKAMNILGWKPKYN---DLNKIV----ETAWNWHSTH 322 >gi|256762081|ref|ZP_05502661.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300860063|ref|ZP_07106151.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256683332|gb|EEU23027.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300850881|gb|EFK78630.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 329 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|171059921|ref|YP_001792270.1| UDP-glucose 4-epimerase [Leptothrix cholodnii SP-6] gi|170777366|gb|ACB35505.1| UDP-glucose 4-epimerase [Leptothrix cholodnii SP-6] Length = 338 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 52/350 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 R++VTGGAG+IGS C L+ +Q +++D L A ++ +++++ +F+Q DI Sbjct: 3 RILVTGGAGYIGSITCVQLIA-AGLQPVILDNLHNAKAAVIDRIEQVAGQRP-AFVQGDI 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + L+E DA+++FA V S+ + N+ GT +L+E R Sbjct: 61 RDRALLDHLLREHAIDAVIHFAGLKAVGESVAQPLSYYDNNVHGTLVLIEAMR------- 113 Query: 120 QDKKDQFRFLQISTDE-VYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 R L S+ VYG + ED P + ++PY TK + ++ AW Sbjct: 114 ---DAGVRTLVFSSSATVYGDATQMPLREDTPTSATNPYGRTKLMVEQILADVVASDPAW 170 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV ++ S G P P L+P I ++ G L +G DG Sbjct: 171 SMTALRYFNPV-GAHPSGLMGEDPQGVPNNLMPF-IAQVAVGRREALRIFGRDYPTPDGT 228 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +RD+++V D H+ AL GR G +N+G + ++++ G +P Sbjct: 229 GMRDYIHVMDLADGHLAALNHA--HGRAGLHVFNLGTGHGNSVLEMLAAFGRACGRELPH 286 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 F RPG D ++ +S++GW ++ T W Sbjct: 287 E--------FAPRRPGDVAACWADPTRAESQLGWCATRTLDQMCADTWRW 328 >gi|91226143|ref|ZP_01261033.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 12G01] gi|91189377|gb|EAS75655.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 12G01] Length = 338 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 97/369 (26%), Positives = 157/369 (42%), Gaps = 60/369 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L I + +F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKSTVLDRIEKVCGVKPTFIKAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + ALK +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKLAMVEALKSHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQNANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P ++++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALIP 272 VRD+++V D HV AL V K + YN+G N +D+V FE D +P Sbjct: 228 GVRDYIHVMDLSDGHVAALEKVGSKAGL-HIYNLGTGNGYSVLDMVKAFEAASGKD--VP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +E RPG D SK +E+GW +E T W W+ Sbjct: 285 --------YQLVERRPGDIAECWADPSKAMNELGWKATRTLEEMTGDT--------WRWQ 328 Query: 333 PLYKELKPD 341 + PD Sbjct: 329 STNPQGYPD 337 >gi|160882560|ref|ZP_02063563.1| hypothetical protein BACOVA_00511 [Bacteroides ovatus ATCC 8483] gi|260170671|ref|ZP_05757083.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D2] gi|299145336|ref|ZP_07038404.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_23] gi|315919015|ref|ZP_07915255.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D2] gi|156112004|gb|EDO13749.1| hypothetical protein BACOVA_00511 [Bacteroides ovatus ATCC 8483] gi|298515827|gb|EFI39708.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_23] gi|313692890|gb|EFS29725.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D2] Length = 356 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 130/301 (43%), Gaps = 52/301 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 ++RDW Y +D++ ++L+L K+ I R+ G Sbjct: 225 DSLRDWGYAKDYIECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NE K ID+ G L + PK + RP + D +K K+ +GW P++ Sbjct: 285 NE-KGIDVA--TGKSLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWDPRK 330 Query: 312 N 312 Sbjct: 331 T 331 >gi|85858261|ref|YP_460463.1| UDP-N-acetylglucosamine 4-epimerase [Syntrophus aciditrophicus SB] gi|85721352|gb|ABC76295.1| UDP-N-acetylglucosamine 4-epimerase [Syntrophus aciditrophicus SB] Length = 339 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 43/346 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 ++VTG AGFIG L R L+ V+ +D L ++ LKE + L F F++ Sbjct: 7 ILVTGAAGFIGFHLSRRLLAAGH-SVVGLDNLNDYYDVR-LKEARLARLTPHPNFRFVRQ 64 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + +RE + + +VN AA++ V S+ +I +NI+G LLE R + Sbjct: 65 GLEEREKLHALFAAESFATVVNLAAQAGVRYSLTNPYAYIDSNIVGFVNLLEGCRHYGVR 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + S+ VYG+ FS + P S Y+ATK +++ + + YG Sbjct: 125 ---------HLVYASSSSVYGANTAMPFSVHHNVDHPVSLYAATKKANELMAHTYSSLYG 175 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 IP YGP+ P+ + L ++EG + ++ G+ RD+ YV+D V + V Sbjct: 176 IPATGLRFFTVYGPWGRPDMALFLFTRAILEGRPIDVFNYGKMRRDFTYVDDIVEGVVRV 235 Query: 237 LKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 + + G YNIG NN ++++ I L D L K+ + Sbjct: 236 MDRIPEGNPAWSGDHPDPGTSYAPYKIYNIGNNNP---VELLSFIEALEDCLGKKAEKN- 291 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F+ + G D + ++G+ P +E G+ + V WY Sbjct: 292 ----FLPLQAGDVPATYADVDDLMRDVGFQPSTPIEEGIRRFVTWY 333 >gi|256854076|ref|ZP_05559441.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300860730|ref|ZP_07106817.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256711019|gb|EEU26062.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300849769|gb|EFK77519.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 330 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|241202963|ref|YP_002974059.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856853|gb|ACS54520.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 348 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 43/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 R++VTGGAGF+GS LC L+ QV+ +D + N+ LK + + N+ + V Sbjct: 31 RVLVTGGAGFLGSHLCETLLA-AGHQVICLDNFSTGMRRNIVHLKRVDRFNVVAHDIVHP 89 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E D I N A + T ++G+ LLE Sbjct: 90 LDLEV----------DEIYNLACPASPPHYQADPIHTTKTCVLGSLNLLELA-------- 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 + R LQ ST EVYG + E + P S Y K ++ L + +T Sbjct: 132 --ARTGARILQASTSEVYGDPNVHPQVESYWGNVNSFGPRSCYDEGKRCAETLFFDFHNT 189 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + + N YGP P+ +++ I + + G + +YGDG R + +V+D + Sbjct: 190 HGVEIKIIRIFNTYGPRMRPDDGRVVSNFIVQALTGQDITIYGDGSQTRSFCFVDDLIGG 249 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPG 289 + ++ + N+G E F I L + +I + S +++I D P Sbjct: 250 MVRMMASPSSLTGPVNLGNPGE-------FTIRELAEQVIGLTGSRSQIIHRALPVDDP- 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S E+ W P+ ++ SGL +T+ ++ Sbjct: 302 --RQRRPDISLAMQELDWRPKIDLSSGLRQTIDYF 334 >gi|134098123|ref|YP_001103784.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|291007417|ref|ZP_06565390.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|133910746|emb|CAM00859.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 24/263 (9%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + +A++ DA+V+ A + V S+ F N+ GT ++E L + Sbjct: 19 DLLDEDAVAAAVRGA--DAVVHLAGLTRVRESVEHPGRFYRVNVGGTATVVEA--LMSTA 74 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF+ ST VYG+ K ED +P SPY+ATK +++ L+ A T GI Sbjct: 75 AATGAVP--RFVLASTGAVYGTPKKQPIGEDAMPHPQSPYAATKLAAEQLLDAAAKTGGI 132 Query: 178 P---VLLSNCSNNYGPYHFPE--KLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVR 231 V + N + + G + + ++IP A+ H+ +YGDG VRD+++V D Sbjct: 133 AAATVRIFNAAGSVGGHADADDTRIIPRALAAAAGHIPHLEVYGDGSAVRDYVHVADIAT 192 Query: 232 ALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 A+ VL + R G E +N+G + ++DA + ++R + P Sbjct: 193 AIVTVLTRSREGRHEVFNVGATPA--------SVADIIDAAEAVTGRRVPVVRKPAN-PA 243 Query: 290 HDRRYAIDSSKIKSEIGWFPQEN 312 D++K++ +GW P+ + Sbjct: 244 ESPELRADTTKLRG-LGWEPRRS 265 >gi|126657358|ref|ZP_01728517.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] gi|126621345|gb|EAZ92057.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] Length = 333 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 157/343 (45%), Gaps = 42/343 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAG+IGS L V+++D L Y G+ + +++I + L + D+ D Sbjct: 7 KILVTGGAGYIGSHAVLAL-KKAGYDVIILDNLIY-GHQDLVEKILKVEL---IIGDLGD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R ++ K++ DA+++FAA ++V SI ++ N+ T LLE + S + Sbjct: 62 RSLLKDIFKQYSIDAVMHFAAFAYVGESIKEPQKYYRNNVANTLTLLEAMK----ATSIN 117 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + ST YG +E P NP +PY A+K + ++ + Y + + Sbjct: 118 K-----LVFSSTCATYGVAQFSPITEQHPQNPINPYGASKLMVEQILKDFSKAYDLNYVC 172 Query: 182 SNCSNNYGPY--------HFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLY 225 N G + H PE LIPL +T + + + ++G DG +RD+++ Sbjct: 173 FRYFNAAGAHPEGLLGEDHDPEPHLIPLVLLTALGKRKFISIFGRDYPTPDGTCIRDYIH 232 Query: 226 VEDHVRALYL---VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V D +A L L++G + +N+G N F I ++D I + + ++ Sbjct: 233 VLDIAQAHLLGLNYLQQGGKSDIFNLGNGNG-------FSIQEVIDTAIEVTQKNIN-VK 284 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG K +GW PQ ++E+ L+ W+ Sbjct: 285 IGDRRPGDPPILVGSGEKAAKILGWKPQYSSLENILSHAWQWH 327 >gi|32266146|ref|NP_860178.1| nucleotide sugar dehydratase [Helicobacter hepaticus ATCC 51449] gi|32262196|gb|AAP77244.1| nucleotide sugar dehydratase [Helicobacter hepaticus ATCC 51449] Length = 312 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 153/334 (45%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS LC L+N +VL +D L + G ++ + + F F++ D+ Sbjct: 5 KILVTGGAGFLGSHLCEKLLNRGD-EVLCVDNL-FTGTKQNIIHLLSNPRFEFMRHDVTF 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 63 PLYV-------EVDEIYNLACPASPVHYQFDPVQTTKTSVMGAI----------NMLGLA 105 Query: 122 KKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNP---SSPYSATKASSDYLVLAWGHTYG 176 K+ + + LQ ST EVYG + + S NP + Y K ++ L + + Sbjct: 106 KRVKAKILQASTSEVYGDPEIHPQVESYKGSVNPIGIRACYDEGKRCAETLFFDYQRQHN 165 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + ++G V +YG+G+ R + YV+D + + Sbjct: 166 LNIKVMRIFNTYGPRMHPNDGRVVSNFIIQALKGEDVTIYGEGKQTRSFCYVDDLIEGMI 225 Query: 235 LVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGH 290 ++ + G G NIG E F + L +A++ ++S ++L+ +D P Sbjct: 226 RLMDSRDGFYGP-VNIGNPRE-------FSMIELANAVLELTHSKSKLVFSPLPQDDP-- 275 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D S ++E+GW P ++ GL KT+ ++ Sbjct: 276 -KQRQPDISLAQNELGWNPNVELKEGLIKTIAYF 308 >gi|170759694|ref|YP_001788040.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406683|gb|ACA55094.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 354 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/359 (22%), Positives = 151/359 (42%), Gaps = 49/359 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----------YAGNLNSLKEISQS 49 M ++VTGGAGFIG + + L+ + +V+ +D L+ Y L+ +K ++ Sbjct: 1 MNILVTGGAGFIGRWVVKTLLLEGN-EVVALDNLSNGRLENIYEFVYEDKLDYIKN-NKE 58 Query: 50 NL-------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 N+ F F++ DI D + K+ + D + + A +V SI + + Sbjct: 59 NISGLEGENFKFIKGDIKDETLLDELFKKNRFDIVYHLGASINVQESIDDPKTIFYNDTV 118 Query: 103 GTFILLEETRLW------------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP 150 GTF +LE+ + W +K + + +ST VY + E+ Sbjct: 119 GTFNMLEKCKTQMFGEKAKMEGDKWILDKNEKAYPCKVVFMSTCMVYDKAPEVGIDEEYR 178 Query: 151 YNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIE 207 P SPY K +++ +VL++ + Y +P ++ N YGP+ ++ + I +E Sbjct: 179 VKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRPFNTYGPFQKTNGEGGVVAIFINNYLE 238 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI---G 264 ++ +YG G RD LYV+D + K + + G I+ + +I G Sbjct: 239 NKNLNIYGTGDQTRDLLYVKDCANFVVEAGYKDSVNGQIVNAGTGRDITINELAQIISSG 298 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + +P + +E+++ + K K + W P +E G+ +T W Sbjct: 299 KVKINHVPHIHPQSEIMKL-----------KCNYKKAKELMEWEPNYTLEEGIEETKQW 346 >gi|51243898|ref|YP_063782.1| lipopolysaccharide biosynthetic protein (WbpP) [Desulfotalea psychrophila LSv54] gi|50874935|emb|CAG34775.1| probable lipopolysaccharide biosynthetic protein (WbpP) [Desulfotalea psychrophila LSv54] Length = 345 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 26/333 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 ++TG AGFIGS L L+ L +V+ +D Y NL+ ++ +Q F F++ D Sbjct: 19 LITGVAGFIGSNLLETLLG-LGQKVVGLDNFVTGYQHNLDEVEGAVTDAQWQNFRFIEGD 77 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC + + A + D ++ AA V RSI+ TNI G +L R Sbjct: 78 ICSLDACQEACQGV--DYVLQQAALGSVPRSIVDPITTNNTNISGFLNMLVAAR------ 129 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + F ++ YG E+ NP SPY+ TK ++ + TY Sbjct: 130 ---DAEVKSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNELYASVFARTYSFK 186 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N G P +IPL MI VF+ GDG+ RD+ ++E+ V+A Sbjct: 187 TIGLRYFNILGKRQDPNGAYAAVIPLWTAAMINDETVFINGDGETSRDFCFIENAVQANI 246 Query: 235 LVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L YN+ +R ++ +F + + L + + + R G R Sbjct: 247 LAATATEEARDNVYNV-AVGDRTTLNELFNL--IKHNLADHGIVYNLDPSYRDFRAGDVR 303 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 D++KIK +G+ PQ + +G+ K + WY+ Sbjct: 304 HSQADTTKIKRLLGYSPQYKIGAGIEKAMGWYV 336 >gi|127512362|ref|YP_001093559.1| UDP-glucose 4-epimerase [Shewanella loihica PV-4] gi|126637657|gb|ABO23300.1| UDP-galactose 4-epimerase [Shewanella loihica PV-4] Length = 337 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 159/360 (44%), Gaps = 52/360 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M ++VTGGAG+IGS L+ND + QV++ID L+ + ++ +LK + Q + +F Q D Sbjct: 1 MTILVTGGAGYIGSHTVVELLNDDQ-QVVIIDNLSNS-SVEALKRVEQITNKGVTFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++ ++ + DA+++FA V S+ + N+ GT +L E + Sbjct: 59 VLNKAFLQKVFTDHDIDAVIHFAGLKAVGESVAQPLRYYENNVTGTLVLCE-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFNVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILKDLHHSDSSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 Y PV ++ S G P P L+P +A + + + ++G DG Sbjct: 170 NIARLRYFNPV-GAHESGLIGEDPNDIPNNLMPFIAQVAVGQREKLSVFGDDYDTHDGTG 228 Query: 220 VRDWLYVED----HVRALY-LVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALIP 272 VRD+++V D H++AL L + G + YN+G +D+V FE Sbjct: 229 VRDYIHVVDLAKGHLKALAKLNTQPGLV--TYNLGTGQGYSVLDMVKAFE---------- 276 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 K+ H + RPG D K ++E+ W +E N + W N ++ Sbjct: 277 KACGHAIAYQIAPRRPGDIAACYADPHKAQTELNWQATHTIEDMANSSWHWQSSNPSGYK 336 >gi|319653584|ref|ZP_08007683.1| UDP-glucose 4-epimerase [Bacillus sp. 2_A_57_CT2] gi|317394783|gb|EFV75522.1| UDP-glucose 4-epimerase [Bacillus sp. 2_A_57_CT2] Length = 330 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 148/354 (41%), Gaps = 56/354 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + L+ + +V+D L AG+ ++ + +F + DI Sbjct: 1 MAILVTGGAGYIGSHIVDLLIRK-GYETVVVDHLA-AGHRQAVHPKA-----AFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ + S L Q +A+ +FAA S V S+ + N++G+ LL+ L Sbjct: 54 SQDFLNSVLSGEQIEAVFHFAASSLVGESMKNPLHYYDNNVLGSLNLLK-------ALDT 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K Q F ST VYG ED P P+SPY TK + + ++ W G + Sbjct: 107 HKVKQLVF--SSTAAVYGEAKSQPIQEDAPLKPASPYGETKLAIERMLHWWAQASGARFV 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + S G H E LIP+ + + + V ++G DG +RD++ Sbjct: 165 SLRYFNAAGAKASGEIGEDHQNETHLIPIILQAALGKRESVSIFGDDYPTKDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +VED A L L+ G +N+GG+ G + +I + T Sbjct: 225 HVEDLAEAHLLALRYLEAGGESNVFNLGGSK-----------GISVKEVIETAAEVTNRC 273 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + R G S K +S + W P++ ++ +++ W W Sbjct: 274 FKVTIAPRRSGDPAELVASSEKARSLLNWQPKKT-------SIRQIVEDAWSWH 320 >gi|15237853|ref|NP_200737.1| UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic [Arabidopsis thaliana] gi|14595666|gb|AAK70882.1|AF387789_1 UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|9759250|dbj|BAB09774.1| dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] gi|21594196|gb|AAM65979.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana] gi|332009783|gb|AED97166.1| UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana] Length = 342 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ +LK+ F ++ D+ Sbjct: 30 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNY-FTGSKENLKKWIGHPRFELIRHDVT 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 89 EPLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 132 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 189 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 190 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 249 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 250 GLIRLMEGNDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D SK K +GW P+ + GL Sbjct: 301 RQRKPDISKAKEVLGWEPKVKLREGL 326 >gi|91976096|ref|YP_568755.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisB5] gi|91682552|gb|ABE38854.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisB5] Length = 325 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 28/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQVD 58 ++VTG AGFIG L R L+ D V+ +D + Y L S L + + F F+++D Sbjct: 6 VLVTGAAGFIGYHLSRELL-DAGYDVVGLDNVNDYYDPALKSARLDLLRDNPRFDFVKLD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR + + + + + AA++ V SI + +N+ G F+ + E C Sbjct: 65 LKDRSATDAVFAKGRFPVVFHLAAQAGVRYSISNPHAYADSNL-GAFVNVLEGCRHNGCR 123 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG+ K FS D +P S Y+ATK S++ + ++ H +G+ Sbjct: 124 --------HLVYASSSSVYGANAKLPFSVGDRTDHPISLYAATKKSNELMAHSYSHLFGL 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 YGP++ P+ I L + G+ + L+ G+ RD+ ++ D R + +L Sbjct: 176 RTTGLRFFTVYGPWYRPDMAIFLFAKAISSGAPIRLFNHGRMRRDFTHISDVTRVMRRLL 235 Query: 238 ----KKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 G R YN+G + + + +V L+ + + +PG Sbjct: 236 DVPENAGDPTARVYNVGNHRPEELMRVV--------DLLEAEFGRKAEKELLPMQPGDVP 287 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K + G+ P+ +E G+ WY Sbjct: 288 ETFADIDDLKRDFGFSPETRIEDGIRDFASWY 319 >gi|224823814|ref|ZP_03696923.1| GDP-mannose 4,6-dehydratase [Lutiella nitroferrum 2002] gi|224604269|gb|EEG10443.1| GDP-mannose 4,6-dehydratase [Lutiella nitroferrum 2002] Length = 373 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/368 (22%), Positives = 151/368 (41%), Gaps = 60/368 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 + ++TG G GS L +L+ +V I + + N + I Q ++ Sbjct: 4 KALITGITGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTQRIDHIFQDPHVENARLKLHY 62 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD + N A+SHV S + + +GT LLE R Sbjct: 63 GDLTDSSNLTRIIQEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L Q+K+ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 120 -LGQEKRT--RFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYREAYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + +G L+ G+ +RDW + D+++ Sbjct: 177 MYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEPCLHMGNMDALRDWGHARDYIKM 236 Query: 233 LYLVLKKGR-------IGERYN------------------IGGNNERKNIDIVFE----- 262 +L+L++ + G +Y+ +G E K + E Sbjct: 237 QWLMLQQDQPDDFVIATGVQYSVRDFIRMAAAELGLTLNFVGHGVEEKAVVAAIEGDKSP 296 Query: 263 ---IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 IG ++ A+ P+ + RP D SK K ++GW P+ + + + Sbjct: 297 ALKIGDIVVAVDPRYF-----------RPAEVETLLGDPSKAKEKLGWVPETTLAEMVKE 345 Query: 320 TVCWYLDN 327 V + L+ Sbjct: 346 MVAYDLEQ 353 >gi|293371923|ref|ZP_06618326.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] gi|292633092|gb|EFF51670.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] Length = 356 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 130/301 (43%), Gaps = 52/301 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 ++RDW Y +D++ ++L+L K+ I R+ G Sbjct: 225 DSLRDWGYAKDYIECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NE K ID+ G L + PK + RP + D +K K+ +GW P++ Sbjct: 285 NE-KGIDVA--TGKSLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWDPRK 330 Query: 312 N 312 Sbjct: 331 T 331 >gi|320531353|ref|ZP_08032325.1| NAD-binding domain 4 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136444|gb|EFW28420.1| NAD-binding domain 4 [Actinomyces sp. oral taxon 171 str. F0337] Length = 364 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 52/356 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG A+ R L + +V+ +D + + + + ++D+ E Sbjct: 6 LVTGGAGFIGCAISRDLADAFD-RVVALDNMHPQIHPSQERPAELDERVELHRLDVALAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 S L PD IV+ AAE+ +S+ A N++GT +L+ L + + Sbjct: 65 DWDSVLAAVAPDVIVHLAAETGTGQSLTEASRHANVNVVGTTQMLD-------ALVRHEI 117 Query: 124 DQFRFLQISTDEVYGS--------------------LDKGLF-----------SEDMPYN 152 + + S+ VYG L+ G + S ++ + Sbjct: 118 RPDKIILASSRAVYGEGAWIDAEGRPSYPGQRTHAMLEAGQWDFEGLTPSVQSSSEVKAS 177 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMI-EG 208 P++ Y+ATK + LV +W ++G+ +L N YGP P I R+ +G Sbjct: 178 PANVYAATKFCQENLVTSWCGSFGVTPVLYRLQNVYGPGQSLINPYTGIVSLFARLAKQG 237 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYL-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 + +Y DGQ VRD+++++D A+ VL Y+I G ER I V + Sbjct: 238 QSIPVYEDGQIVRDFVFIDDVASAIVAGVLHSPAAALPYDI-GLGERTTIMQVAQT---- 292 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 I + Y + R G R D+++ + + W P+ + G+N+ W Sbjct: 293 ---IAEHYGAPAPHVTGQFRDGDVRAAWADTARARQALDWEPRVGVAEGINRLCDW 345 >gi|195135298|ref|XP_002012071.1| GI16768 [Drosophila mojavensis] gi|193918335|gb|EDW17202.1| GI16768 [Drosophila mojavensis] Length = 447 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 45/335 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R+++TGGAGF+GS +LV+DL IQ V+V+D N + N F + D Sbjct: 118 RILITGGAGFVGS----HLVDDLMIQGHEVIVVDNFFTGRKRNVEHWLGHEN-FELIHHD 172 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + I + D I + A+ + + + I TN +GT + L Sbjct: 173 IVNPLFI-------EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTI----------NVL 215 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAW 171 K+ + L ST EVYG D + + Y NP P Y K S+ L A+ Sbjct: 216 GLAKRVMAKVLIASTSEVYG--DPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAY 273 Query: 172 GHTYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + V ++ N YGP H + +++ I + + + +YG+G+ R + YV D Sbjct: 274 AKQEKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDL 333 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V L + L + N+G E+ + E ++ L+ S + I+ +ED P Sbjct: 334 VDGL-IALMASNYTQPVNLGNPVEQ----TIGEFANIIKHLV-GGQSEVKQIKAMEDDP- 386 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ K + W P+ +ESGL +T+ ++ Sbjct: 387 --QRRKPDITRAKKRLNWEPKVPLESGLLQTISYF 419 >gi|225431177|ref|XP_002269841.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 373 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 22/322 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG G GS L +L+N +V + + + N L I S Sbjct: 31 LITGITGQDGSYLTEFLLNK-GYEVHGLIRRSSNFNTQRLNHIYIDPHNSHKARMKLHYA 89 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R + PD + N AA+SHV S D G LLE R S Sbjct: 90 DLSDASSLRRWIDTIAPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR---SH 146 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R+ Q + E++GS SE P++P SPY+A+K ++ + + + YG+ Sbjct: 147 IMATGRSHIRYYQAGSSEMFGSTSPPQ-SETSPFHPRSPYAASKCAAHWYTVNYREAYGL 205 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + D+V A Sbjct: 206 FACNGILFNHESPRRGE-NFVTRKITRAVGRIKIGLQSKLFMGNLQASRDWGFAGDYVEA 264 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++++L++ + + + E ++ E+ F L + + + F RP Sbjct: 265 MWMMLQQEKPDDY--VVATEESHTVEEFLEVAFGSVGLNWRDHVVIDKRYF---RPAEVD 319 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 DSSK + +GW P+ + E Sbjct: 320 NLKGDSSKARKVLGWKPKVDFE 341 >gi|29830118|ref|NP_824752.1| UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] gi|29607228|dbj|BAC71287.1| putative UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] Length = 319 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 48/334 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++L+ + +V+V+D L+ +E + SF++ DI Sbjct: 4 KYLVTGGAGYVGSVVAQHLI-EAGHEVVVLDNLS-----TGFREGVPAGA-SFVEGDI-- 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + F DA+++FAA S V S++ +++ N+ GT LL R Sbjct: 55 RDAAKWLDSSF--DAVLHFAAFSQVGESVVKPEKYWDNNVGGTLALLAAMR--------- 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 + + + ST YG ++ E P P++PY A+K + D+++ +G+ + Sbjct: 104 EAGVRKLVFSSTAATYGEPEEVPIVETAPTRPTNPYGASKLAVDHMITGEAGAHGLAAVS 163 Query: 181 -----LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLYV 226 ++ + G H PE LIPL + ++ +G + +YG DG VRD+++V Sbjct: 164 LRYFNVAGAYGSCGERHDPESHLIPL-VLQVAQGRRDAISVYGDDYPTPDGTCVRDYIHV 222 Query: 227 EDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D A L L GE N+G N +++ + + IP+ + Sbjct: 223 ADLAEAHLLALDAATPGEHLVCNLGNGNGFSVREVIETVRQVTGHPIPE---------IV 273 Query: 285 EDRPGHDRRYAIDSSKIKSE-IGWFPQENMESGL 317 R D + S+ E +GW P +G+ Sbjct: 274 APRRAGDPAVLVASAATARERLGWNPARADLAGI 307 >gi|145356251|ref|XP_001422347.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582588|gb|ABP00664.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 317 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 40/344 (11%) Query: 11 FIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALK 70 IGS + + L+ + K +V + + Y +L++L + N ++ DI D ++ + Sbjct: 1 MIGSYVVKQLIQEGKYEVHGL--VRYRSDLSNLA--GELNNIQLVRGDILDGTRVKQVVA 56 Query: 71 EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQ 130 E P I +FAA++ S A+ + TNI GTF +LE R ++ LS ++ RFL Sbjct: 57 EICPTVIFHFAAQAINGVSYDSAELTLDTNIKGTFNMLEAVR--FAGLS----NKTRFLL 110 Query: 131 ISTDEVYGSLD---KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL------ 181 + YG +G E+ P P SPY +K ++D L + H++G+ V+ Sbjct: 111 AGSSTEYGKTADTWEGAIPEEAPLAPVSPYGVSKVAADLLAQQYVHSHGMHVVTARFFIQ 170 Query: 182 --SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 + + + P F + +A+ + S V +G RD + D R + ++ Sbjct: 171 VSAGGTESLAPQEFCRQ---IAMIELGLQSPVVRHGRITTKRDITDLRDSARVVTKLVDL 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH--TELIRFIEDRPGHDRRYAID 297 G GE YNIG I + +LD I S T L +R ++ D Sbjct: 228 GEPGESYNIGSG-------IALSMKDILDTAISLSTRPDITTLFDGARERLYDEKILLSD 280 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPD 341 + KI+ GW P N + T+ L + WR + L P+ Sbjct: 281 NRKIRELTGWIPDPN----ITNTIADILKH---WRRKTRTLFPE 317 >gi|61969670|gb|AAX57448.1| UDP-GlcNAc C4 epimerase [Vibrio vulnificus] Length = 340 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 40/340 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GNLNSLKEIS------QSNLFSFLQ 56 +VTG AGFIGS L L LK+ V+ +A G+ ++L E+ Q F+F++ Sbjct: 19 LVTGVAGFIGSNLLEKL---LKLDQTVVGLDNFATGHQHNLDEVQSLVTAEQWQRFTFIE 75 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLW 114 DI D A+ D +++ AA V RSI AD T NI G +L+ Sbjct: 76 GDIRDYPSCEQAVTGV--DYVLHQAALGSVPRSI--ADPLTTNAANITGFLNMLQAA--- 128 Query: 115 WSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 K+ Q + F ++ YG E+ P SPY+ TK ++ + Sbjct: 129 -------KEAQVKSFTYAASSSTYGDHPALPKVEENIGKPLSPYAVTKYVNEVYASVYAR 181 Query: 174 TYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 TYG N +G P +IP + MI VF+ GDG+ RD+ Y+E+ Sbjct: 182 TYGFKATGLRYFNVFGRRQDPNGAYAAVIPKWTSAMINNEEVFINGDGETSRDFCYIENV 241 Query: 230 VRALYLVL--KKGRIGERYN--IGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V+ L + +GE YN +GG R ++ +F+ L L + ++++ + + + Sbjct: 242 VQMNMLAATGSEDALGEVYNCAVGG---RTTLNTLFDT--LKIELSNNNVNYSKNVTYRD 296 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R G R K ++G+ P+ N++ G+++ + WY+ Sbjct: 297 FRLGDVRHSQASIEKANVKLGYEPKYNIQQGISEAMPWYV 336 >gi|302866601|ref|YP_003835238.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] gi|302569460|gb|ADL45662.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] Length = 321 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 30/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR++VTGGAGFIGS L R L ++ +++V+D L+ G++ +L+ + FL + Sbjct: 1 MRVVVTGGAGFIGSNLVRALSETGRVAEIVVVDDLS-TGSVENLRGLP----VEFLIGTV 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + A+ ++V+ A V RSI N GT +L+ + Sbjct: 56 LDPALLDRAMAGAS--SVVHLGALGSVPRSIDDPLRSHHANATGTLTVLD---------A 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + + S+ VYG+ E + P SPY+ +K +++ +A+ + YG+ V Sbjct: 105 AHRNGVPQCVLASSSSVYGANPVLPRQEGLRPMPVSPYAVSKLATEAYGIAFANCYGMAV 164 Query: 180 LLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 L N +GP H ++P +T +E + ++GDG+ RD+ YV + Sbjct: 165 LPFRFFNVFGPRQAANHVYAAVVPRFVTAALENRPLQVHGDGRQSRDFTYVGSVTSVIVD 224 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 VL++ + N+ +D++ E+ +L P H + RPG R Sbjct: 225 AVLRQVAAPDVVNLAFGARISLLDLIAELETVLGR--PLDVVH------VPARPGDVRES 276 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++++ GL TV W+ Sbjct: 277 QADHTRLRELFPAASPTPFAEGLRATVEWF 306 >gi|254422086|ref|ZP_05035804.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] gi|196189575|gb|EDX84539.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] Length = 342 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 51/332 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAG+IGS L + Q +++D L Y KE+++ +L + L V + D Sbjct: 17 ILVTGGAGYIGSHAVLAL-EETGYQTVILDSLEYGH-----KELAERHLKAKLIVGNTAD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + A+++FAA V S+ ++ N+ GT LLE + ++ Sbjct: 71 RALLDDIFSTYNVAAVMHFAAYIAVGESVSEPAKYYRNNVCGTLNLLE------AMVAAG 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K R + ST +YG ED P NP SPY+ +K + ++L + YG+ + Sbjct: 125 FK---RLVFSSTCAIYGPPKTVPIPEDHPQNPISPYATSKLMVEKMLLDFQSAYGLQSVC 181 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLY 225 ++ G H PE LIPL + + + + ++G DG +RD+++ Sbjct: 182 FRYFNAAGADSQGRLGEDHNPETHLIPLVLFAALGKRDSISIFGSDYETRDGTCIRDYIH 241 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--E 279 V D HV+ + +L+ G +N+G N G+ + +I + T E Sbjct: 242 VSDLADAHVKGVEYLLEAGETA-FFNLGNGN-----------GYTVKEVIETARQVTGKE 289 Query: 280 LIRF-IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ E RPG S + + +GW PQ Sbjct: 290 IVAVPCERRPGDPPSLVGTSDRARKVLGWQPQ 321 >gi|33864981|ref|NP_896540.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] gi|33638665|emb|CAE06960.1| Putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] Length = 331 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/342 (26%), Positives = 146/342 (42%), Gaps = 25/342 (7%) Query: 1 MRLIVTGGAGFIGSALCR-YLVNDLKIQVLVIDKLTYA-GNLNSLKEISQSNLFSFLQVD 58 M ++VTG GFIGS L LV+ ++ + + G L++L E ++ L L D Sbjct: 1 MNVLVTGADGFIGSHLVEALLVSGHHVRAFCLYNSNGSWGWLDTLPESVKAELEVVLG-D 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D +R A+ D + + AA + S L ++ TNI GT +++ R Sbjct: 60 IRDPLFVREAMTGC--DQVFHLAALIAIPYSYLAPASYVDTNIHGTLNVVQAAR------ 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + ST E YGS +E+ P SPY+A+K +D + L++ ++ P Sbjct: 112 ---DLGVSRVVHTSTSETYGSAQFVPITEEHPQVGQSPYAASKIGADQIALSYWRSFQTP 168 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V + N YGP +IP IT++ G G RD+ +V D A + Sbjct: 169 VSVLRPFNTYGPRQSARAVIPTIITQVAAGQRQIRLGALSPTRDFNFVADTCAAFQAIAD 228 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +G+ N N E D IG +++ + T+ R + +R + D Sbjct: 229 CDPALGQVVNAASNFEISIGDTASLIGEVMNVQLEI---LTDEQRMRPEGSEVNRLFG-D 284 Query: 298 SSKIKSEIGWFPQ----ENMESGLNKTVCWYLD--NNWWWRP 333 ++ ++ GW P + GL +T W+ D N +RP Sbjct: 285 NTLLRQLTGWKPVYGGLDGFRRGLAQTAEWFSDPANLARYRP 326 >gi|307268523|ref|ZP_07549897.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] gi|306515154|gb|EFM83695.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] Length = 320 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|119898093|ref|YP_933306.1| putative dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72] gi|119670506|emb|CAL94419.1| putative dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72] Length = 317 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 35/332 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++V GGAGF+GS LC L+ + +VL +D G ++ + Q F+ + DI Sbjct: 8 LRVLVAGGAGFLGSHLCERLLRE-GGRVLCVDNFQ-TGCAANVAPLLQREGFTLREHDI- 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +A E D I N A + + T+++G LLE Sbjct: 65 ------TAPLEADVDQIYNLACPASPLHYREDPVRTVRTSVVGAMNLLELA--------- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + R LQ ST E+YG + E P P + Y K ++ L + + Sbjct: 110 -TRTGARILQASTSEIYGDPAEHPQQEAYHGNVNPIGPRACYDEGKRCAETLFFDYHRQH 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + ++ N YGP P+ ++I + + + G + LYGDG R + YV+D + L Sbjct: 169 ELRTKVARIFNTYGPRMRPDDGRVISNFVVQALRGQPLTLYGDGSQSRSFCYVDDLIDGL 228 Query: 234 YLVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ N+G E ++ E+ L S S + ED P R Sbjct: 229 LRLMNSADDFCGPVNLGNPVESTVRELADEVIRLT-----GSRSTLRYLPLPEDDPVRRR 283 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + ++E+GW P +E GL +T+ ++ Sbjct: 284 ---PDITLARAELGWRPTTALEDGLRRTIDYF 312 >gi|323456804|gb|EGB12670.1| hypothetical protein AURANDRAFT_18438 [Aureococcus anophagefferens] Length = 393 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 24/331 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLV-IDKLT--YAGNLNSLKEISQSNLFS--FLQ 56 R++VTGGAGFIGS+L L +V+V +D Y+ + F + Sbjct: 60 RVLVTGGAGFIGSSLMGALHEQFAPEVVVGLDNFNDYYSPAFKKARAHRLKKDFGRDVVA 119 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+C+ + KE + +V+ AA++ V S+ ++ N+ LLE R Sbjct: 120 GDVCNGSLLEDLFKEHRFTHVVHLAAQAGVRYSLNHPLSYVKNNLECYVTLLEVVR---- 175 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 D + + S+ VYG K FSE D NP++ Y A+K ++ + A+ H Y Sbjct: 176 --KIDPESRPSLSYASSSSVYGRNKKIPFSEADAVTNPANLYGASKFMNEQIAAAFHHIY 233 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-GSHVFLYGDGQNVRDWLYVEDHVRALY 234 G+ + YGP+ P+ + TR IE G + LY G+ RD+ YV+D V + Sbjct: 234 GLHSVGLRFFTVYGPWGRPD-MAAFLFTRAIELGKPLTLYNKGEMRRDFTYVDDIVSGII 292 Query: 235 LVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ +N+G N + + + I KS ++ Sbjct: 293 GSMQYCADAAAVFNLGNNQPVELMHFI--------QTIEKSLGTKATMKHKTSTAEIKET 344 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 YA D +K ++ +G+ P+ ++E G+ K + WY Sbjct: 345 YA-DITKAQALLGYAPKTSIEDGMAKFIDWY 374 >gi|298490156|ref|YP_003720333.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708] gi|298232074|gb|ADI63210.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708] Length = 316 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 42/336 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-------YAGNLNSLKEISQSNLFS- 53 ++IVTG AGFIGS L L+ + +V+ ID+ N+ + + +S L Sbjct: 3 KIIVTGAAGFIGSHLVDILLQRGE-EVIGIDEFNDYYDPVLKRKNIATFQNLSNFTLIEG 61 Query: 54 ---FLQV-DICDRECIRSALKEFQPDAIVNFAAESHVDRS-ILGADEFITTNIIGTFILL 108 FL++ IC I I + AA++ V S G + NI T +LL Sbjct: 62 DIRFLELPGICQNVEI-----------IYHQAAQAGVRSSWGKGFRAYTERNINTTQVLL 110 Query: 109 EETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 E ++D ++ R + ST +YG + +E++ P SPY TK +++ L Sbjct: 111 EA--------AKDARNLKRLVFASTSSIYGDAETLPTNEEIHPKPVSPYGITKLAAERLC 162 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + +G+P + YGP P+ ++E + +YGDGQ RD+ +V D Sbjct: 163 GLYQKNFGVPFVSLRYFTVYGPRQRPDMAFNKFFKAVLEDEAIPVYGDGQQTRDFTFVSD 222 Query: 229 HVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V A +GE +NIGG + +++ + ++ I +++ IE Sbjct: 223 AVAANLAAATVPEAVGEIFNIGGGSRVVLAEVLDTMSEIVGKPIKRNH--------IEKA 274 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G R A D SK + +G+ P+ ++ GL + W Sbjct: 275 MGDARHTAADVSKARKILGYEPRISLREGLQQEWEW 310 >gi|119510282|ref|ZP_01629418.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] gi|119465026|gb|EAW45927.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] Length = 332 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L +V+++D L Y G+ + ++++ Q L + D DR Sbjct: 8 ILVTGGAGYIGSHTVLAL-KQAGYEVVILDNLVY-GHQDLVEKVLQVEL---VVGDTGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K A+++F+A ++V S+ ++ N++GT LLE + Sbjct: 63 PLLDDLFKSRNITAVMHFSAYAYVGESVTDPAKYYRNNVVGTLTLLE---------AMLA 113 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 +F+ ST YG + E+ P NP +PY ATK + ++ + YG+ + Sbjct: 114 ASIHKFVFSSTCATYGVPEIVPIPENHPQNPINPYGATKLMVERILSDFDVAYGLKSVRF 173 Query: 183 NCSNNYGPY--------HFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 N G + H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGAHPGGLLGEDHQPETHLIPLVLLTALGKRKSISIFGTDYPTPDGTCIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D HV L +L+ G E +N+G N GF + +I + T L Sbjct: 234 NDLADAHVLGLQYLLENGD-SEVFNLGNGN-----------GFSVREVIAAAKEVTGLTI 281 Query: 283 FIED---RPGHDRRYAIDSSKIKSEIGWFPQ 310 +E+ RPG K + + W PQ Sbjct: 282 PVEECDRRPGDPPSLIGSGEKARKILNWQPQ 312 >gi|325954588|ref|YP_004238248.1| UDP-glucuronate 5'-epimerase [Weeksella virosa DSM 16922] gi|323437206|gb|ADX67670.1| UDP-glucuronate 5'-epimerase [Weeksella virosa DSM 16922] Length = 341 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 31/258 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN----SLKEI----------- 46 +++VTG AGFIG + L+ ++ +V+ +D + ++N LK++ Sbjct: 3 KVLVTGAAGFIGYFTVKKLM-EVGYEVVGLDNINDYYDINLKYARLKDVGFRREDAEVWT 61 Query: 47 --SQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +QS + SF+++++ DRE + + ++ Q DA+++ AA++ V S+ ++ +N+ Sbjct: 62 KETQSTTYKNLSFIRLNLEDRENLPTLFEKHQFDAVIHLAAQAGVRYSLENPMAYVDSNL 121 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSAT 160 +G LLE C K + S+ VYG K F E D P S Y+AT Sbjct: 122 VGYVNLLE-------CCRHAKVKHLVY--ASSSSVYGENPKTPFEEEDRVDYPVSLYAAT 172 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K +++ L + H Y +P YGPY P+ L T + E + ++ +G Sbjct: 173 KKANELLAHTYSHLYQLPTTGLRFFTVYGPYGRPDMAPMLFATAITENRPIKVFNNGDMS 232 Query: 221 RDWLYVEDHVRALYLVLK 238 RD+ +++D V + + LK Sbjct: 233 RDFTFIDDIVNGIIISLK 250 >gi|297569758|ref|YP_003691102.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] gi|296925673|gb|ADH86483.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] Length = 335 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/347 (21%), Positives = 147/347 (42%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNL--FSFLQ 56 M++++TG AGFIGSAL L+ +V+ ID Y +L + ++ ++ + Sbjct: 1 MKVLITGAAGFIGSALALRLLARGD-EVVGIDNHNDYYDPSLKEARLARHADHPGYTHCR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D+ ++ +P +VN AA++ V SI +I +NI+G +LE R Sbjct: 60 IDLADKAAVQEVFAVHRPRRVVNLAAQAGVRYSIENPLSYIESNIVGFAHILENCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG+ FS + P S Y+A+K S++ + + H + Sbjct: 116 -----HHEIEHLVYASSSSVYGANTAMPFSVHHNVDHPLSVYAASKKSNELMAHTYSHLF 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 G+P YGP+ P+ + ++ + ++ G++ RD+ +++D + + Sbjct: 171 GLPTTGLRFFTVYGPWDRPDMALAKFTRAIMADEPIKIFNYGKHRRDFTFIDDIIEGVVR 230 Query: 236 VLKKGRIGER------------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL K YNIG N + + ++ V + K+ Sbjct: 231 VLDKPATPNPEWSGNNPDPGSSTAPWRVYNIGNNRQVELMEYV--------ETLEKALGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T + +PG D + + + + P ++ G+ + WY Sbjct: 283 TAQKEMLPLQPGDVPDTFADVTDLARDFNYQPNTTVQEGIGRFAAWY 329 >gi|162146656|ref|YP_001601115.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] gi|209543352|ref|YP_002275581.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] gi|161785231|emb|CAP54777.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] gi|209531029|gb|ACI50966.1| UDP-glucose 4-epimerase [Gluconacetobacter diazotrophicus PAl 5] Length = 351 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 53/332 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAG++GS + L D V++ D NL + S + F+ D+ D Sbjct: 6 RFLVTGGAGYVGSHVVAALC-DAGHDVVIFD------NLRTGHRESVPDGVRFVPGDLAD 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + L + D +++FAA S V S+ ++ N F L++ +C+ Sbjct: 59 RPLVDRVLADGPWDGVLHFAALSLVGESMQQPFLYMEANAGLGFSLID------ACVRHG 112 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ ST ++G + L +E P P SPY +K + ++ +G L Sbjct: 113 VK---RFVFSSTAALFGQTEDALITERTPIIPGSPYGESKHMVERALVWADRIHG---LR 166 Query: 182 SNC-----------SNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRD 222 S C + G H PE LIPL I + + L+G DG +RD Sbjct: 167 SACLRYFNAAGADPTGRIGEDHRPETHLIPLVIDAALGRRGELQLFGDDYPTPDGTCIRD 226 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D H+ AL ++ + + YN+G N++++ + + +P Sbjct: 227 YIHVTDLAQAHLAALDVIHDRSVV---YNVGNGVGHSNMEVIRSVERVTGRTVP------ 277 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R RPG R + ++++E W P+ Sbjct: 278 --WRLAPRRPGDPARLVAGAERLRAETSWTPR 307 >gi|145334845|ref|NP_001078768.1| UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic [Arabidopsis thaliana] gi|332009784|gb|AED97167.1| UDP-glucuronic acid decarboxylase 3 [Arabidopsis thaliana] Length = 357 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ +LK+ F ++ D+ Sbjct: 45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNY-FTGSKENLKKWIGHPRFELIRHDVT 103 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 104 EPLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 146 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 147 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 204 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 205 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 264 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 265 GLIRLMEGNDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 315 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D SK K +GW P+ + GL Sbjct: 316 RQRKPDISKAKEVLGWEPKVKLREGL 341 >gi|282901458|ref|ZP_06309383.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] gi|281193737|gb|EFA68709.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] Length = 311 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+++ +V+ +D Y G+ +L + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLMSN-NHEVICLDNF-YTGSKQNLLSWLNNPRFEIIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D + + A + + + TN++GT + L Sbjct: 59 --EPIR-----LEVDQVYHLACPASPVHYQYNPIKTVKTNVMGTL----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + RFL ST EVYG + +ED P S Y K ++ L + Sbjct: 102 AKRVKARFLLASTSEVYGDPEIHPQTEDYRGSVNPIGIRSCYDEGKRVAETLTFDYHREN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + V ++ N YGP +++ + + + G+ + +YG+GQ R + YV D V L Sbjct: 162 KVDVRVARIFNTYGPRMLENDGRVVSNFVVQALRGNPLTVYGEGQQTRSFCYVSDLVEGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + L G N+G E +++ I +++ + I+F RR Sbjct: 222 -IKLMNGDYTGPVNLGNPEEYTILELAQTIQNMINPEV--------QIKFTPLPADDPRR 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K K+ + W P+ ++++GL TV Sbjct: 273 RRPDITKAKTWLNWEPKISLQTGLKLTV 300 >gi|333027132|ref|ZP_08455196.1| putative UDP-glucose 4-epimerase [Streptomyces sp. Tu6071] gi|332746984|gb|EGJ77425.1| putative UDP-glucose 4-epimerase [Streptomyces sp. Tu6071] Length = 323 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 147/355 (41%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAG+IG+ + R L + V+V D L+ G L E S L Sbjct: 1 MTWLVTGGAGYIGAHVVRVLAG-AGVPVVVFDDLS-TGEAARLPEGVPLETGSVL----- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L E Q +++ A + V S+ + N+ G +LLE R Sbjct: 54 DRARLDAVLGEHQVTGVLHIAGKKQVAESVERPLHYYRENVEGLRVLLEAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG + L +ED P P SPY TK ++L+ YG+ + Sbjct: 106 -AAGVDRLVFSSSASVYGVPEPELVTEDTPCLPISPYGETKLIGEWLLRDASVAYGLRTI 164 Query: 181 LSNCSNNYGPYHFP-------EKLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G P L+PL R+ G ++G DG VRD+++V+ Sbjct: 165 ALRYFNVVG-AGLPGLADKGAANLVPLIFERVDAGRPPLVFGDDYDTPDGTCVRDYVHVQ 223 Query: 228 DHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI- 281 D A ++ I R NIG ++++ + K+ T+L+ Sbjct: 224 DIAEAHLAAARRLDEAPEGIALRLNIGRGEGSSVLEMIER--------VLKTTGRTDLVP 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW-WRPLY 335 + RPG R + I++E+GW + GL++ + ++ W WR L+ Sbjct: 276 EVVPRRPGDAARCVASADAIRAELGW----SARYGLDEMI----ESAWQGWRHLH 322 >gi|302831027|ref|XP_002947079.1| hypothetical protein VOLCADRAFT_87343 [Volvox carteri f. nagariensis] gi|300267486|gb|EFJ51669.1| hypothetical protein VOLCADRAFT_87343 [Volvox carteri f. nagariensis] Length = 391 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/355 (26%), Positives = 152/355 (42%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 + ++VTGGAGFIGS L V V+D L+ AG L +L+++ + F FL+VD Sbjct: 58 LHILVTGGAGFIGSHAVMVLAGAGH-AVTVLDNLSRGNAGALRALRDMIPARRFRFLRVD 116 Query: 59 ICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + DR + SAL P D +++FAA ++V S+ ++ + T LL+ Sbjct: 117 LGDRATLCSALATSSPPLDLVMHFAAVAYVGESMRDPLQYYKNVTVNTVNLLD------- 169 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-----YLVLAW 171 C++ + + + ST VYG+ +K +E P P +PY +K ++ ++L + Sbjct: 170 CMAANGIKKLVY--SSTCAVYGNPEKLPVTEQTPPVPINPYGQSKLMAEEPDFKAIILRY 227 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG------------DGQN 219 + YG S+ G Y PE I+ + + L G DG Sbjct: 228 FNVYG-----SDPLGRLGEYPRPELRSQSRISGACMDAALGLVGHLTVKGTRHPTEDGTC 282 Query: 220 VRDWLYVEDHVRALYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 VRD+++V D + A + ++ YNIG + ++A + Sbjct: 283 VRDYIHVMDLISAHEVAMRHLANPPPLYNIGTGKG-------VSVKQFVEACRRVTQRDI 335 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 ++ E RPG D SKI E+GW ++E GL W WR Sbjct: 336 TVVYQEEARPGDYAAVWSDVSKINRELGWRANYTDIEEGLRHA--------WQWR 382 >gi|256618651|ref|ZP_05475497.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|257089481|ref|ZP_05583842.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] gi|256598178|gb|EEU17354.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256998293|gb|EEU84813.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] Length = 329 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHPSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDAA--REVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|254851397|ref|ZP_05240747.1| nucleotide sugar epimerase [Vibrio cholerae MO10] gi|1230585|gb|AAC46250.1| nucleotide sugar epimerase [Vibrio cholerae O139] gi|3724324|dbj|BAA33613.1| probable nucleotide sugar epimerase [Vibrio cholerae] gi|254847102|gb|EET25516.1| nucleotide sugar epimerase [Vibrio cholerae MO10] gi|1588979|prf||2209416J nucleotide sugar epimerase Length = 334 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 42/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS-QSNLFSFLQV 57 M+ +VTG AGFIGSA + L V+ ID + Y NL + + LF FL+V Sbjct: 1 MKYLVTGAAGFIGSATVKKLTEQGH-HVVGIDNINDYYDVNLKHARLARIEHPLFHFLKV 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI DR + ++ + + +++ AA++ V S+ + +N++G +LE R Sbjct: 60 DIADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q+K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 115 --QNKVGHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYD 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 IP YG + P+ + P T+ I G + + G RD+ +V+D V + Sbjct: 171 IPTTGLRFFTVYGSWGRPD-MAPFIFTKKILAGEAIDINNHGDMWRDFTHVDDIVEGVVR 229 Query: 236 V------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 + ++ G YNIG + ++ V I L K++ Sbjct: 230 IADVLPTRNAAWTVESGTPATSSAPYAIYNIGHGSPINLMEFVKAIEEQLGIEANKNFRS 289 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + PG + D++ + + G+ P+ + G+++ + WY D Sbjct: 290 MQ--------PGDVYQTYADTADLFAATGYKPKVGVRDGVSEFIAWYRD 330 >gi|329766698|ref|ZP_08258241.1| nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136953|gb|EGG41246.1| nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 296 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/327 (27%), Positives = 146/327 (44%), Gaps = 40/327 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG +GFIG+ L L+N +V I K K+ S N S VDI Sbjct: 4 ILVTGSSGFIGNYLVHQLLNQ-NYKVFGISKR---------KQKSFENFISH-SVDIS-- 50 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + S L+ I++ AA S VD L + N+ GT +LE R Sbjct: 51 KVTNSKLRN-NFSKIIHMAALSDVDYCNLNPSKCYEINVNGTQNMLEIAR---------- 99 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 K+ F+ +S+ VYG+ SE +P S Y+A+K S+ L + TYG+ + ++ Sbjct: 100 KNDSEFIFLSSSHVYGNSKNIPISETESNSPLSHYAASKKMSEILCETYSLTYGLDIRIA 159 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 + YGP L+ I ++I S + L G+ RD+++++D +R L ++ + Sbjct: 160 RIFSVYGPNSSKSNLVFNIINQVIHNSQITL-GNTTPKRDFIFIDDVIRGLLSIINSKKK 218 Query: 243 G-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS--- 298 G YN+G ID+ I +LD +S+ ++ R I + + D Sbjct: 219 GYNVYNLGTGRSTSIIDL---INMILD------FSNKKM-RVISKKDKIRKNDVFDVCAN 268 Query: 299 -SKIKSEIGWFPQENMESGLNKTVCWY 324 SK+ S W PQ ++ GL T +Y Sbjct: 269 ISKMSSNFNWKPQVTLKKGLEITCKYY 295 >gi|310821282|ref|YP_003953640.1| NAD-dependent epimerase/dehydratase family protein [Stigmatella aurantiaca DW4/3-1] gi|309394354|gb|ADO71813.1| NAD-dependent epimerase/dehydratase family protein [Stigmatella aurantiaca DW4/3-1] Length = 318 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/332 (25%), Positives = 147/332 (44%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +V GGAGF+GS LC L+ D V V + LT G +L+ + F+F++ DI + Sbjct: 5 RAVVLGGAGFVGSHLCERLLEDGAGVVAVDNFLT--GAEENLRTLRGRPGFAFVRQDIVE 62 Query: 62 RECIRSALKEFQPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D + N A+ S +D + L E + +GT + L Sbjct: 63 GLSVEGPV-----DYVFNMASPASPIDYAQL-PLETLRVGSLGT----------ENALKL 106 Query: 121 DKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + FLQ ST EVYG +G + P P + Y K ++ + A+ Sbjct: 107 AEARGAVFLQASTSEVYGDPLVHPQHEGYYGNVNPIGPRAVYDEAKRYAEAITSAYARVR 166 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP + +++P + + + G ++GDG R + YV+D V L Sbjct: 167 GVKARIVRIFNTYGPRMRLKDGRVVPAFVGQALRGEDFTVFGDGTQTRSFCYVKDLVDGL 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 + L + E NIG N R E+ L A ++ + + P +D + Sbjct: 227 -VRLALSEVTEPVNIG--NPR-------EMTILQFAEAVRAAAGGGGRILYQPLPQNDPK 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ ++ +GW P+ ++E GL +T+ ++ Sbjct: 277 QRQPDITRARTLLGWEPKVSLEEGLRETISYF 308 >gi|218130872|ref|ZP_03459676.1| hypothetical protein BACEGG_02467 [Bacteroides eggerthii DSM 20697] gi|217987216|gb|EEC53547.1| hypothetical protein BACEGG_02467 [Bacteroides eggerthii DSM 20697] Length = 358 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 156/341 (45%), Gaps = 35/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF GS L +L ++L +V+ + + ++ N + + + ++ DICD Sbjct: 13 RVLVTGHTGFKGSWLSIWL-HELGAEVIGVAQEPFSERDNFVLSGIGKRIKADIRADICD 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +++ +E++PD + + AA+ V S E TN++GT +LE R+ Sbjct: 72 GERMKAIFREYRPDIVFHLAAQPLVRLSYDIPVETYRTNVMGTINILEAIRV-------- 123 Query: 122 KKDQFRF-LQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 D + + I+TD+ Y + ++ + E+ P PYS++K +++ + +W ++ Sbjct: 124 -TDSVKVSVMITTDKCYENKEQIWGYRENEPMGGYDPYSSSKGAAEIAIASWRRSFFNPE 182 Query: 176 -----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G + N G + +++IP I R +E Q +R W +V + Sbjct: 183 EYEKHGKSIASVRAGNVIGGGDWALDRIIPDCI-RALEMGKPIEIRSPQAIRPWQHVLEP 241 Query: 230 VRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L+ +K + E +N G E +I V+ + + K+Y ELI Sbjct: 242 LSGYMLLAQKMWDEPTKYCEGWNFGPRAE--SISTVWGVA----TKVVKNYGSGELIDIS 295 Query: 285 EDRPGHDRR-YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H+ + +D SK K +GW P+ N+E + V WY Sbjct: 296 VPNALHEAKLLMLDISKAKFRLGWEPRMNIEQCMKLVVDWY 336 >gi|254558780|ref|YP_003065875.1| UDP-glucose 4-epimerase [Methylobacterium extorquens DM4] gi|254266058|emb|CAX21810.1| Putative UDP-glucose 4-epimerase [Methylobacterium extorquens DM4] Length = 370 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/369 (23%), Positives = 149/369 (40%), Gaps = 67/369 (18%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG L L+ +V V+D L + + + +S F++ D+ D E Sbjct: 6 LITGGAGFIGRHLASALLAR-GYRVRVLDSLIEQVHGGTGQPLSLDPAVEFVEGDVRDAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ +V+ AAE V +S+ + +++ N GT L + L + + Sbjct: 65 AVARAIAGA--THVVHLAAEVGVGQSMYAVERYVSVNDCGTATLFQA--LIEAPVQ---- 116 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM----------PYNPSSP----------------- 156 R + S+ +YG +GL+ + P P P Sbjct: 117 ---RVVVASSMSIYG---EGLYRTEADATVEDAVRPPRRPGEPWDPPDQQGRPMRPVPTP 170 Query: 157 ----------YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---P-EKLIPLAI 202 Y+ TK + L L YG+ + N YGP P ++ + Sbjct: 171 ESKRPALASVYALTKYMQERLTLTLAPAYGMEGVALRLWNVYGPGQALSNPYTGVLAIFA 230 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVF 261 R++ G ++ DG+ RD+++VED +A L L+ G+ YN+G +R V Sbjct: 231 ARLLHGQPPMIFEDGEQRRDFVHVEDVAQAFVLALEHPAAAGQVYNVGSGEDRT----VN 286 Query: 262 EIGFLLDALIPKSYSHTELIRFI--EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 E+ LL ++ E+ + + R G R D KI E+G+ P+ N GL + Sbjct: 287 EVARLLA----RAMGREEIAPQVTGQARAGDIRHCIADIGKIARELGYAPKRNFAEGLAE 342 Query: 320 TVCWYLDNN 328 W + Sbjct: 343 LAAWVAEQQ 351 >gi|194323215|ref|ZP_03056999.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. novicida FTE] gi|194322579|gb|EDX20059.1| dTDP-D-glucose 4,6-dehydratase [Francisella tularensis subsp. novicida FTE] Length = 85 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 58/84 (69%) Query: 242 IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 +GE YNIGG NE N+ +V I L+D P++ H++LI F+EDR GHD RYAID+SKI Sbjct: 2 VGEVYNIGGINEVDNLTLVKTICKLMDEYKPENAPHSKLITFVEDRKGHDWRYAIDNSKI 61 Query: 302 KSEIGWFPQENMESGLNKTVCWYL 325 ++E+GW P + + +T+ +YL Sbjct: 62 QNELGWKPSQAFDKMFRQTIEFYL 85 >gi|114778096|ref|ZP_01452983.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans PV-1] gi|114551514|gb|EAU54068.1| NAD-dependent epimerase/dehydratase [Mariprofundus ferrooxydans PV-1] Length = 374 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 41/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L L++ +V I + + N + I Q F Sbjct: 3 KALITGVTGQDGSYLAELLLSK-GYEVHGIKRRASSFNTQRVDHIYQDPHVEHKHFVLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L+E QPD + N A+SHV S + + +GT LLE RL Sbjct: 62 GDLSDSSNLTRILQEVQPDEVYNLGAQSHVAVSFESPEYTADVDGLGTLRLLEAIRL--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E++G + + E P+ P SPY+ K + ++V+ + +YG Sbjct: 119 -LGMEKK--VRFYQASTSELFGEVQEIPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I ++ + +G LY G+ +RDW + D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRGLSNVAQGLENCLYMGNMDALRDWGHARDYVRM 235 Query: 233 LYLVLKKGR-------IGERYNIGG-------------NNERKNIDIVFEIGFLLDALIP 272 +++L++ + G +Y++ E + +D V + L +L+ Sbjct: 236 QWMMLQQAQPEDFVIATGVQYSVRQFIEWSAAELGITLRFEGQGVDEVGIVAALDSSLVT 295 Query: 273 KSYSHTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMES 315 + + R + P + R + D +K K ++GW P+ ++ Sbjct: 296 SHPALSVGDRIVAVDPRYFRPCEVETLLGDPTKAKEKLGWTPETTVQQ 343 >gi|319785122|ref|YP_004144598.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171010|gb|ADV14548.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 348 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 35/331 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAGF+GS LC L+ + +V+ D G + ++ I F ++ DIC Sbjct: 13 VLVAGGAGFLGSHLCETLLRN-GWRVICADNF-LTGRMENIISIMDHPGFRLIEQDIC-- 68 Query: 63 ECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 L +P + I N A + R T +IGT LLE + + Sbjct: 69 ----RPLDLGEPVERIFNLACAASPPRYQADPIHTTRTCVIGTLNLLELAVRYDA----- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMP-----YNPSSPYSATKASSDYLVLAWGHTYG 176 R LQ ST EVYG ++ ED P + Y K +++ L + Sbjct: 120 -----RLLQASTSEVYGDPEQHPQREDYVGHVNCTGPRACYDEGKRTAETLCFDYLRAGK 174 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 V ++ N YGP P +++ I + +E + ++GDG R + YV D + L Sbjct: 175 ADVRVARIFNTYGPRMDPADGRIVSNLIMQALEKRPLTIFGDGLQTRSFCYVSDQIDGLR 234 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G+ N+G E F I L AL+ +RF+ RR Sbjct: 235 RLMDIDPNPGKPVNLGNPGE-------FTI-VRLAALVKAMTGTKSDLRFLPLPQDDPRR 286 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S+ K+ +GW P+ + GL T+ ++ Sbjct: 287 RQPDISRAKALLGWTPKVPLNEGLKLTIDYF 317 >gi|312880559|ref|ZP_07740359.1| UDP-galactose 4-epimerase [Aminomonas paucivorans DSM 12260] gi|310783850|gb|EFQ24248.1| UDP-galactose 4-epimerase [Aminomonas paucivorans DSM 12260] Length = 326 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 48/345 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L + +VLV+D + ++++ + + D+ D Sbjct: 2 ILVTGGAGYIGSVTTLALKEE-GFEVLVVDDFS-----KGHRDLAFGDRLE--EGDLRDP 53 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + + +++FAA S V S+ + + N+ GT LL R Sbjct: 54 AFLEGVFSRYPVEGVLHFAARSLVGESMSDPEGYYDVNLRGTLNLLATMR---------A 104 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 RF+ ST VYG + SE+ P P++ Y TK + + + YG+ + Sbjct: 105 HGVRRFVLSSTAAVYGDPTEQPISEEAPKVPTNTYGETKLFLEGALRRYRDAYGMGSVSL 164 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRDWLY 225 ++ G +H PE LIPL I IEG H+ L+G DG +RD+++ Sbjct: 165 RYFNAAGADPRCRTGEHHVPETHLIPL-IFDAIEGRRKHLTLFGEDYPTPDGTCIRDYVH 223 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HVRAL +L+ E +N+ GN + ++ V ++ K+ + Sbjct: 224 VTDLAQAHVRALRRLLEAPDRCEAFNL-GNGDGHSVRQVLQVA-------EKATGRPVPL 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQE-NMESGLNKTVCWYL 325 R G R S K + +GW P+ ++E ++ WY+ Sbjct: 276 EVGPRRSGDPSRLVASSRKAQEVLGWVPEHGDLEDIVSTAWAWYI 320 >gi|16330543|ref|NP_441271.1| UDP-glucose-4-epimerase [Synechocystis sp. PCC 6803] gi|1653034|dbj|BAA17951.1| UDP-glucose 4-epimerase [Synechocystis sp. PCC 6803] Length = 338 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/353 (26%), Positives = 151/353 (42%), Gaps = 57/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L VL+ D L+Y KE+ Q + DR Sbjct: 7 ILVTGGAGYIGSHGVLAL-QQAGFDVLIYDNLSYGH-----KELVQPLGVELVVGHTGDR 60 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+++FAA V S+ D + N++GT LLE + L+ Sbjct: 61 QKLDQLFATRNIAAVMHFAAFIAVGESVQKPDIYYQNNVVGTLTLLE------AMLAAGI 114 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K +F+ ST VYG + +E P +P SPY+A+K + ++ + YG ++ Sbjct: 115 K---KFVFSSTCAVYGMPKEIPMTESHPIDPLSPYAASKRMVEQILADFDQAYGFKSVIF 171 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPLA +T + + + ++G DG +RD+++V Sbjct: 172 RYFNASGADPQGRLGEDHNPETHLIPLALLTALKQRPQLSVFGTDYDTLDGTALRDYIHV 231 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-- 280 D HV L +L+ G +N+G N GF + +I + + T L Sbjct: 232 CDLAIAHVLGLQYLLEGGE-SNIFNLGNGN-----------GFSVRQVIEVAKAVTGLDI 279 Query: 281 -IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + RPG S+K + +GW PQ + +D+ W W Sbjct: 280 PYQLCPRRPGDAPILVGSSAKAREILGWNPQ-------YPDLHTIIDHAWQWH 325 >gi|315608554|ref|ZP_07883538.1| NAD-dependent epimerase/dehydratase [Prevotella buccae ATCC 33574] gi|315249725|gb|EFU29730.1| NAD-dependent epimerase/dehydratase [Prevotella buccae ATCC 33574] Length = 319 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 149/333 (44%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V GGAGFIGS LC LV+D V+ +D L Y G++++++++ S F F++ D+ Sbjct: 8 KVLVAGGAGFIGSHLCNRLVHD-GYSVVCLDNL-YTGSMSNIEKLMDSPRFDFIKHDVIF 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I F + A+ H R+ + T + GT +LE R Sbjct: 66 PYEINDISMVFN---LACPASPVHYQRNGVYTTR---TAVEGTINMLEIAR--------- 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTYG 176 K++ RFLQ ST EVYG SE N S Y K ++ L + + YG Sbjct: 111 -KNKCRFLQASTSEVYGDPSVTPQSETYYGNVHTVGVRSCYDEGKRCAESLCMDYYREYG 169 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + V + N YGP +++ I + + + +YG G+ R + YV+D + A L Sbjct: 170 VKVKIIRIFNTYGPNMAVNDGRVMSNFIMQALTDKPLTIYGTGKQTRSFQYVDDLIEAML 229 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + + NIG +ER DI I K+ +H++ RP D Sbjct: 230 RMSGTPDNVTGPVNIGNPDERTIEDIADCI---------KALTHSKSALAYAPRPVDDPC 280 Query: 294 YAI-DSSKIKSEI-GWFPQENMESGLNKTVCWY 324 + D S K+ + GW P+ + G+ KTV ++ Sbjct: 281 HRCPDISLAKNMLSGWEPKVGLHEGIQKTVEYF 313 >gi|312900800|ref|ZP_07760095.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] gi|311292085|gb|EFQ70641.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] Length = 320 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|303229527|ref|ZP_07316315.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-134-V-Col7a] gi|302515652|gb|EFL57606.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-134-V-Col7a] Length = 329 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 91/353 (25%), Positives = 154/353 (43%), Gaps = 55/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L+ D +V+D + G+ +++ + +++DI Sbjct: 1 MNILVTGGAGYIGSHTVGALI-DAGFTPIVVDNFS-RGHRSAIPK-----GVKVIELDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +K+ I++FAA S V S++ + N++G++ L+E R Q Sbjct: 54 DSKLV-NIMKDNNIKGIMHFAAHSQVGESMINPSIYYENNVVGSYRLIESAR-------Q 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F F ST VYG ++ E P++ Y TK + ++ + YG + Sbjct: 106 AGVQYFVFS--STAAVYGEPEEVPIVETAKLQPTNVYGRTKLMIEEMLYDYSAIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEG-SHVFLYG------DGQNVRDWL 224 ++ S N G H PE LIPL + ++ H+ ++G DG +RD++ Sbjct: 164 ALRYFNAAGADESGNIGEDHSPETHLIPLVLEAALKKRPHITVFGTDYDTSDGTCIRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +V D HV A+ ++ G G R +N+G N DI+ + IP Y Sbjct: 224 HVTDLASAHVLAMNYLINGG--GSRAFNLGSGNGFSVKDIIETAKNVTKIDIPVEYG--- 278 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 E R G S IK +GW PQ + S + + + W W Sbjct: 279 -----ERRVGDPSTLIASSECIKDVLGWKPQHSELSHI-------IGDAWRWH 319 >gi|182677026|ref|YP_001831172.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632909|gb|ACB93683.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] Length = 326 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GF+GS LCR L+ +VL +D + G ++ ++ + F L+ D+ Sbjct: 7 RILVTGGGGFLGSHLCRRLLGQGH-EVLCVDNF-FTGRRRNIADLMGHDRFEMLRHDVTF 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + DAI N A + + T+++G + L Sbjct: 65 PLFV-------EVDAIYNLACPASPIHYQFDPVQTTKTSVVGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + LQ ST EVYG + +E P S Y K ++ L + + Sbjct: 108 KRLKIPILQSSTSEVYGDPTEHPQTETYWGHVNPVGSRSCYDEGKRCAETLFFDYHRQHK 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 + + ++ N YGP P+ +++ I + + G + +YG G R + YV D + L Sbjct: 168 LSIKVARIFNTYGPSMRPDDGRVVSNFICQALLGQDITVYGKGTQTRSFCYVSDLIDGLD 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L+ + NIG NE F I L + +I + + + +I + P D R Sbjct: 228 RLMNSPPEVTGPINIGNPNE-------FTIRELAEKVIAMTGAKSRIIE--KPLPSDDPR 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + K+ +GW P +E GL T+ ++ Sbjct: 279 QRQPDITLAKNVLGWRPTVELEEGLTHTIAYF 310 >gi|53720406|ref|YP_109392.1| putative GDP sugar epimerase/dehydratase protein [Burkholderia pseudomallei K96243] gi|53725820|ref|YP_103859.1| GDP-D-mannose dehydratase [Burkholderia mallei ATCC 23344] gi|76810339|ref|YP_334665.1| protein WcbK [Burkholderia pseudomallei 1710b] gi|121598339|ref|YP_991880.1| putative GDP-D-mannose dehydratase [Burkholderia mallei SAVP1] gi|124383513|ref|YP_001027054.1| putative GDP-D-mannose dehydratase [Burkholderia mallei NCTC 10229] gi|126450294|ref|YP_001081704.1| putative GDP-D-mannose dehydratase [Burkholderia mallei NCTC 10247] gi|126451998|ref|YP_001067516.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 1106a] gi|134280045|ref|ZP_01766756.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 305] gi|166998857|ref|ZP_02264709.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia mallei PRL-20] gi|167740008|ref|ZP_02412782.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 14] gi|167904100|ref|ZP_02491305.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei NCTC 13177] gi|217420481|ref|ZP_03451986.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 576] gi|237813645|ref|YP_002898096.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei MSHR346] gi|238562112|ref|ZP_00440892.2| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia mallei GB8 horse 4] gi|242314594|ref|ZP_04813610.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 1106b] gi|254178797|ref|ZP_04885451.1| putative GDP-D-mannose dehydratase [Burkholderia mallei ATCC 10399] gi|254180790|ref|ZP_04887388.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 1655] gi|254191626|ref|ZP_04898129.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei Pasteur 52237] gi|254194811|ref|ZP_04901241.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei S13] gi|254202564|ref|ZP_04908927.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei FMH] gi|254207901|ref|ZP_04914251.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei JHU] gi|254259640|ref|ZP_04950694.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 1710a] gi|254299119|ref|ZP_04966569.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 406e] gi|254355956|ref|ZP_04972234.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei 2002721280] gi|13446697|gb|AAK26466.1|AF285636_18 WcbK [Burkholderia mallei] gi|13932340|gb|AAK49806.1| WcbK [Burkholderia pseudomallei] gi|52210820|emb|CAH36806.1| putative GDP sugar epimerase/dehydratase protein [Burkholderia pseudomallei K96243] gi|52429243|gb|AAU49836.1| GDP-D-mannose dehydratase, putative [Burkholderia mallei ATCC 23344] gi|76579792|gb|ABA49267.1| WcbK [Burkholderia pseudomallei 1710b] gi|121227149|gb|ABM49667.1| putative GDP-D-mannose dehydratase [Burkholderia mallei SAVP1] gi|124291533|gb|ABN00802.1| putative GDP-D-mannose dehydratase [Burkholderia mallei NCTC 10229] gi|126225640|gb|ABN89180.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 1106a] gi|126243164|gb|ABO06257.1| putative GDP-D-mannose dehydratase [Burkholderia mallei NCTC 10247] gi|134248052|gb|EBA48135.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 305] gi|147746811|gb|EDK53888.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei FMH] gi|147751795|gb|EDK58862.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei JHU] gi|148024931|gb|EDK83109.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia mallei 2002721280] gi|157808845|gb|EDO86015.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 406e] gi|157939297|gb|EDO94967.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei Pasteur 52237] gi|160694711|gb|EDP84719.1| putative GDP-D-mannose dehydratase [Burkholderia mallei ATCC 10399] gi|169651560|gb|EDS84253.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei S13] gi|184211329|gb|EDU08372.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 1655] gi|217395893|gb|EEC35910.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 576] gi|237506139|gb|ACQ98457.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei MSHR346] gi|238523213|gb|EEP86653.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia mallei GB8 horse 4] gi|242137833|gb|EES24235.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 1106b] gi|243064940|gb|EES47126.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia mallei PRL-20] gi|254218329|gb|EET07713.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 1710a] Length = 337 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 149/332 (44%), Gaps = 34/332 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVI----DKLTYAGNLNSLKEISQSNLFSFLQV 57 R+++TG G +GS L +L+ + ++ + L +L L I++ N + Sbjct: 4 RVLITGITGMVGSHLADFLLENTDWEIYGLCRWRSPLDNVSHL--LPRINEKNRIRLVYG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I A+K+ PD + + AA+S+ S + + TN+ GT +LE Sbjct: 62 DLRDYLSIHEAVKQSTPDFVFHLAAQSYPKTSFDSPLDTLETNVQGTANVLE-------A 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L ++ D + S+ EV+G + +K E+ ++P+SPY+ +K +D + + Y Sbjct: 115 LRKNNIDAVTHVCASS-EVFGRVPREKLPIDEECTFHPASPYAISKVGTDLIGRYYAEAY 173 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + V+ + + GP F E I + G V G+ ++R + V D V Sbjct: 174 NMTVMTTRMFTHTGPRRGDVFAESTFAKQIAMIERGLIPPVVKTGNLDSLRTFADVRDAV 233 Query: 231 RALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--- 286 RA Y+++ I G YNIGG +G +LD LI S S ++IR D Sbjct: 234 RAYYMLVTINPIPGAYYNIGGTYS-------CTVGQMLDTLISMSTSK-DVIRVETDPER 285 Query: 287 -RPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 RP ++ K ++ GW P+ + E + Sbjct: 286 LRPIDADLQVPNTRKFEAVTGWKPEISFEKTM 317 >gi|291336903|gb|ADD96432.1| nucleotide sugar epimerase [uncultured organism MedDCM-OCT-S09-C426] Length = 304 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 37/321 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGG GFIGS + L+ +V V+D L+ N +++ ++ ++++ D Sbjct: 4 RCLVTGGCGFIGSHIVDELIKQGH-EVSVVDDLSAESNEQFY--VNEKAQYNKIKIEDYD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + C + D + + AAES + ++ + TN GT +L+ +R Sbjct: 61 KLCESKVFENI--DFVFHLAAESRIQPTLDRPQKACHTNFYGTCNVLQLSR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + R + T YG +K +EDMP + +PYS TK +++ L + +G+ + Sbjct: 110 ENNIKRVIYSGTSSAYGLRNKIPLTEDMPRDCLNPYSVTKVAAEDLCKMYYTLWGLETVT 169 Query: 182 SNCSNNYGPYHFPEK-----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA---L 233 N +G P K +I + + + G + + GDG+ RD+ YV+D VRA Sbjct: 170 LRYFNVFGERQ-PIKGQYAPVIGIFLRQNKNGEPLTIVGDGKQRRDFTYVKDVVRANIKA 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 KK +G+ NIG I+ L L +++ H + +R G R Sbjct: 229 ATCSKKEVLGQIINIGTGTSSSIIN--------LAKLASENHKH------LPERLGESRE 274 Query: 294 YAIDSSKIKSEIGWFPQENME 314 D S+ K+ +GW P +E Sbjct: 275 TLADISRAKNLLGWEPTVTVE 295 >gi|257087746|ref|ZP_05582107.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256995776|gb|EEU83078.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|323481704|gb|ADX81143.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] gi|327535995|gb|AEA94829.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 330 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|257420168|ref|ZP_05597162.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|257161996|gb|EEU91956.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 330 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEILDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|223040592|ref|ZP_03610863.1| GDP-mannose 4,6-dehydratase [Campylobacter rectus RM3267] gi|222878140|gb|EEF13250.1| GDP-mannose 4,6-dehydratase [Campylobacter rectus RM3267] Length = 343 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 54/337 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNL---NSLKEISQSNLFSFLQVD 58 + ++TG G G+ L +YL+ +L +V + T + NL N L E++Q+ L++D Sbjct: 3 KALITGITGQDGAYLAKYLL-ELGYKVYGTCRRTASLNLWRLNEL-EVAQNENLQILEMD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWS 116 + D I S + E +PD I N AA+S V S + F T N IG LLE R+ Sbjct: 61 LTDPFNILSVVSEVRPDEIYNLAAQSFVGVSF--KEPFHTANATGIGVLNLLEAVRIV-- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 DK +F Q ST E++G + SED P+ P SPY K ++ + + +Y Sbjct: 117 ----DK--NIKFYQASTSEMFGKVQAIPQSEDTPFYPRSPYGVAKLYGHFITVNYRESYE 170 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I +L ++ S G K+ A ++ + V G+ RDW Y ++V+ Sbjct: 171 IFGSSGILFNHESPLRGLEFVTRKITNTAAKIALKKAEVLKLGNMDAKRDWGYAYEYVQG 230 Query: 233 LYLVLKKGR-------IGERYNIGG----NNERKNIDIVFEI-----------GFLLDAL 270 ++ +L+ R GE + + E +I++ FE G +L + Sbjct: 231 MHAILQHDRPDTFVLATGETTTVRDFVRLSFEALDIELKFEGEGQNEVARDKNGKILVRV 290 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 P+ Y RP D+SK K E+GW Sbjct: 291 DPQFY-----------RPAEVDLLIGDASKAKKELGW 316 >gi|242279503|ref|YP_002991632.1| UDP-glucose 4-epimerase [Desulfovibrio salexigens DSM 2638] gi|242122397|gb|ACS80093.1| UDP-glucose 4-epimerase [Desulfovibrio salexigens DSM 2638] Length = 328 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 46/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + L+V GGAG+IGS + R ++ + V V D L+ G+ +LK F+Q D+ Sbjct: 5 LSLLVCGGAGYIGSHMTR-MIAEAGHDVTVFDNLS-TGHAEALK------WGKFVQGDLR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + E DA+ +F+ V S+ E+ N+ GT LL+ R Sbjct: 57 NPEDLAKLFAENSFDAVFHFSGLIVVSESVEKPFEYYDNNVTGTLNLLQAMR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K +F+ ST VYG + +ED P P +PY TK + ++ + YG+ + Sbjct: 109 -KHGVNKFVFSSTAAVYGEPVMEMITEDHPLKPLNPYGRTKLQVEEILQDYAVAYGLNSV 167 Query: 181 L--------SNCSNNYGPYHFPE-KLIP-LAITRMIEGSHVFLYG------DGQNVRDWL 224 ++ + G H PE LIP + ++ + EG + ++G DG VRD++ Sbjct: 168 CFRYFNAAGAHPDSTIGEAHSPETHLIPNILLSCIDEGRRLKIFGSDYPTPDGTCVRDYI 227 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D H++A+ + + +N+G +D++ ++ I Y Sbjct: 228 HILDLCDAHLKAIGF-MDSNKGAHSFNLGNGKGFSILDVIKSSSEVIGREIQFDYEPA-- 284 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R DSSK + W PQ Sbjct: 285 ------RAGDSPRLVADSSKAAKTLNWTPQ 308 >gi|116250331|ref|YP_766169.1| epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115254979|emb|CAK06053.1| putative epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 45/344 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDI 59 R++VTGGAGF+GS LC L+ QV+ +D + N+ LK + + N+ + V Sbjct: 31 RVLVTGGAGFLGSHLCETLLA-AGHQVICLDNFSTGMRRNIVHLKRVDRFNVVAHDIVHP 89 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E D I N A + T ++G+ LLE Sbjct: 90 LDLEV----------DEIYNLACPASPRHYQADPIHTTKTCVLGSLNLLELA-------- 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 + R LQ ST EVYG + E + P S Y K ++ L + +T Sbjct: 132 --ARTGARILQASTSEVYGDPNVHPQVESYWGNVNSFGPRSCYDEGKRCAETLFFDFHNT 189 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + + N YGP P+ +++ I + + G + +YGDG R + +V+D + Sbjct: 190 HGVEIKIIRIFNTYGPRMRPDDGRVVSNFIVQALTGQDITIYGDGSQTRSFCFVDDLIGG 249 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPG 289 + ++ + N+G E F I L + +I + S +++I D P Sbjct: 250 MVRMMASPSSLTGPVNLGNPGE-------FTIRELAEQVIGLTGSRSQIIHRALPVDDP- 301 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 R+ D S E+ W P+ ++ SGL +T+ ++ + RP Sbjct: 302 --RQRRPDISLAMQELDWRPKIDLSSGLRQTIDYF--DGLLARP 341 >gi|77165013|ref|YP_343538.1| GDP-mannose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|254434596|ref|ZP_05048104.1| GDP-mannose 4,6-dehydratase [Nitrosococcus oceani AFC27] gi|76883327|gb|ABA58008.1| GDP-mannose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|207090929|gb|EDZ68200.1| GDP-mannose 4,6-dehydratase [Nitrosococcus oceani AFC27] Length = 373 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 46/298 (15%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 63 DLTDATNLIRVIQEVQPDEIYNLAAQSHVAVSFETPEYTANADALGTLRLLEAIRIL--- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ RF Q ST E+YG + +E P+ P SPY+A K + ++ + + YG+ Sbjct: 120 ---GLEEKVRFYQASTSELYGKVQSVPQNEQTPFYPRSPYAAAKLYAYWITVNYREAYGM 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I + R+ G L+ G+ + RDW + D+V+A Sbjct: 177 YACNGILFNHESPVRGETFITRKITRGLVRITLGLQSCLHVGNLEARRDWGHARDYVKAQ 236 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIE 285 +L+L++ GE++++ R+ I+ ++ G LD + ++R + Sbjct: 237 WLMLQQSTPDDYVIATGEQHSV-----REFIEQAAQVLGLSLD-WQGQGEEEIAVVRAVA 290 Query: 286 DRP---GH----------DRRY-------AI--DSSKIKSEIGWFPQENMESGLNKTV 321 + GH DRRY A+ D+SK + E+GW PQ + + + V Sbjct: 291 GQAMECGHIQPGDVLIRIDRRYFRPTEVEALLGDASKARRELGWAPQTAFDDLVREMV 348 >gi|167031562|ref|YP_001666793.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1] gi|166858050|gb|ABY96457.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1] Length = 310 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 29/323 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS LC L+ D V ++D + G ++L ++ L ++ D+ D Sbjct: 6 ILITGGAGFIGSHLCDALL-DKGYAVRILDDFS-TGRRSNL-QVDHPRL-ELIEGDVADA 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + A+V+ AA + V S+ +N IGT + E R+ Sbjct: 62 GLVTQTAAGCR--AVVHLAAVASVQASVEDPVRTHQSNFIGTLNVCEAMRVHGV------ 113 Query: 123 KDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 R L S+ VYG+ +G +E+ P P +PY+ K +S+ + + +G+ ++ Sbjct: 114 ---RRVLFASSAAVYGNNGEGESIAEETPKAPLTPYAVDKLASEQYLDFYRRQHGLEPVV 170 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP P +I + R ++G + ++GDG+ RD+LYV D V+ + L Sbjct: 171 FRFFNIFGPRQDPSSPYSGVISIFCERAVQGLPITVFGDGEQTRDFLYVGDLVQVMVQAL 230 Query: 238 KKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 ++ ++ E NIG N + LL AL K I ++ R G R Sbjct: 231 EQPQVEEGAVNIGLNQATS-------LNQLLAAL-EKVVGSLPAISYVAARSGDIRHSRA 282 Query: 297 DSSKIKSEIGWFPQENMESGLNK 319 D+ ++ + + M GL + Sbjct: 283 DNQRLLARFKFAQATPMVEGLAR 305 >gi|315185993|gb|EFU19757.1| UDP-galactose 4-epimerase [Spirochaeta thermophila DSM 6578] Length = 324 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 159/354 (44%), Gaps = 55/354 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MR ++TGGAG+IGS + R L+ + +V+V D L++ G+ +++ S L+V D+ Sbjct: 1 MRFVLTGGAGYIGSHVYR-LLKERGHEVVVYDNLSH-GHREAVEP-------SDLRVGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E R L F+PD +++FAA V S EF N +GT L++ + Sbjct: 52 HDTEKFREVLLSFRPDVVMHFAAFIEVGISTERPLEFFENNTVGTIRLVQ---------A 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA---WGHTYG 176 F+ ST VYG ++ SED P +PY ++K + + + W Sbjct: 103 MMHTGVHHFIFSSTAAVYGHPERVPISEDARLTPVNPYGSSKVMVEEFLRSLSEWSSFRY 162 Query: 177 IPVLLSNCS-----NNYGPYHFPE-KLIPLAITRMIEGS--HVFLYG------DGQNVRD 222 + + N + + G H PE LIPL I + +G H+ ++G DG +RD Sbjct: 163 VAIRYFNAAGAAEDGSIGEAHDPETHLIPL-ILKAAKGERPHITIFGTDFPTPDGTAIRD 221 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 +++V D A L L G + N G G + R+ ID ++ + + Sbjct: 222 YIHVTDLAEAHLLAAEYLMDGGESQALNCGYSRGYSVREVIDTAKKV-------TGREFP 274 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV-CWYLDNNW 329 E R D P DSS++++ +GW P + + + KT W L+ + Sbjct: 275 VIEGDRRAGDPPA----LVADSSRMRTILGWKPTRDDLAYIIKTAWNWELNRRY 324 >gi|257415685|ref|ZP_05592679.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257157513|gb|EEU87473.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 329 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPARIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|209528200|ref|ZP_03276669.1| UDP-glucose 4-epimerase [Arthrospira maxima CS-328] gi|284051661|ref|ZP_06381871.1| UDP-glucose 4-epimerase [Arthrospira platensis str. Paraca] gi|209491366|gb|EDZ91752.1| UDP-glucose 4-epimerase [Arthrospira maxima CS-328] Length = 332 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 152/341 (44%), Gaps = 65/341 (19%) Query: 1 MRLIVTGGAGFIGS----ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 + ++VTGGAG+IGS AL R N + V+D L Y G+ ++++ + L +Q Sbjct: 6 VNVLVTGGAGYIGSHGVLALQRAGYNPI-----VLDNLVY-GHQELVEDVLKVEL---IQ 56 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D DR + + DA+++FAA ++V S+ +++ N++GT LL Sbjct: 57 GDTNDRLLLDQLFSSRKIDAVMHFAAYAYVGESVTNPEKYYRNNVVGTLTLL-------G 109 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ D+F F ST YG E+ P NP SPY A+K + ++ + Y Sbjct: 110 AMNSAGIDKFVF--SSTCATYGVPQIIPIPENHPQNPISPYGASKLMVERILADFDTAYN 167 Query: 177 IPVLLSNCSNNY------------GPYHFPE-KLIPLAI-TRMIEGSHVFLYG------D 216 L + S Y G H PE LIPL + T + + H+ ++G D Sbjct: 168 ----LRSVSFRYFNAAGADPDGLLGEDHDPETHLIPLTLFTALGKRDHISIFGTDYPTPD 223 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G +RD+++V D HV L +L G+ E +N+G GF + +I Sbjct: 224 GTCIRDYIHVSDLADAHVLGLQYLLSGGKT-EFFNLGNGK-----------GFSVQEVIE 271 Query: 273 KSYSHT-ELIRFIE--DRPGHDRRYAIDSSKIKSEIGWFPQ 310 + T I+ +E RPG S K + +GW PQ Sbjct: 272 SAREITGREIKTVECDRRPGDPPSLVGTSEKAQEILGWNPQ 312 >gi|297796879|ref|XP_002866324.1| UDP-glucuronic acid decarboxylase [Arabidopsis lyrata subsp. lyrata] gi|297312159|gb|EFH42583.1| UDP-glucuronic acid decarboxylase [Arabidopsis lyrata subsp. lyrata] Length = 342 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ +LK+ F ++ D+ Sbjct: 30 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKENLKKWIGHPRFELIRHDVT 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 89 EPLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 132 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 189 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 190 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 249 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 250 GLIRLMEGDDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D SK K +GW P+ + GL Sbjct: 301 RQRKPDISKAKEVLGWEPKVKLREGL 326 >gi|257468983|ref|ZP_05633077.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|317063231|ref|ZP_07927716.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|313688907|gb|EFS25742.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] Length = 329 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 50/351 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + R L+ D +V+V+D L G+++++ E ++ + D+ Sbjct: 1 MAILVCGGAGYIGSHVTRALI-DSGEEVIVLDNLQ-TGHVDAVHEKAK-----LVLGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + K+ + D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DDEFMERVFKDNKIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMK-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 K + + + ST YG + E P++PY +K + + ++ YGI Sbjct: 106 -KYNVNKIVFSSTAATYGEPENIPILESDATFPTNPYGESKLAVEKMLKWCDKAYGIKYT 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V ++ + G H PE LIP+ + + + H+ +YG DG +RD++ Sbjct: 165 ALRYFNVAGAHPTGEIGEDHSPESHLIPIILQVALGKREHIGIYGDDYPTADGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A L LK+ G E +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHILALKRLNNGGESEIFNL-GNGEGFSVKEVIEVAR-------KVTKHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R G + S K E+ W P+ N T+ +D W W Sbjct: 277 IVSPRRAGDPAKLVASSDKAMKELKWKPKYN-------TLEKIIDTAWTWH 320 >gi|5524312|gb|AAD44205.1|AF143772_7 GepiA [Mycobacterium avium] Length = 353 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 61/363 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGSAL R LV + V ++D L G ++ LF+ D+ Sbjct: 5 VLITGGAGFIGSALSRRLV-EAGYDVALMDVLHPQVHGGDRPVELAPSVRLFTG---DVT 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L+ F+P IV+ AAE+ +S+ A + N++GT LL+ LS+ Sbjct: 61 HAPDFDAVLRLFRPTQIVHLAAETGTAQSLSEATRHGSVNVVGTTQLLD-------ALSR 113 Query: 121 DKKDQFRFLQISTDEVYG-------------------SLDKGLFSEDMPYN--------- 152 + + S+ VYG L G + P Sbjct: 114 SGLVPEQLVLASSRAVYGEGAWQSGAEVFYPQPRSHAQLVAGRWDPQGPAGEQAVPLPSR 173 Query: 153 -------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLA 201 P++ Y+ATK + ++L+ AW + + + N YGP ++ L Sbjct: 174 ADRTEPRPTNVYAATKLAQEHLLAAWTAAHDTNLSVLRLQNVYGPGQSLTNSYTGIVALF 233 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK-GRIGERYNIGGNNERKNIDIV 260 +G + +Y DG+ VRD++Y++D V AL+ +++ R ++G ++ Sbjct: 234 ARLARQGQALEVYEDGRIVRDFVYIDDVVDALFAAVQRPASPQRRLDVGSGRATTIQELA 293 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 I + +A E + + R G R + D S++GW P+ +E GL Sbjct: 294 NTIAAMCEA--------PEPVVVGKFRDGDVRAASCDIEPATSQLGWHPKWTLEDGLRAL 345 Query: 321 VCW 323 + W Sbjct: 346 LEW 348 >gi|313199884|ref|YP_004038542.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. MP688] gi|312439200|gb|ADQ83306.1| dTDP-glucose 4,6-dehydratase [Methylovorus sp. MP688] Length = 361 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 29/339 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 ++TG G G+ L L+N I V I + + N + + + F D Sbjct: 6 LITGVTGQDGAYLAELLLNKGYI-VHGIKRRASSFNTARIDHLYRDPHEEGVRFFLHHGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D C+ +++ QPD I N AA+SHV S + ++ +G +LE R+ Sbjct: 65 LTDSSCLIRIIQQVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRIL---- 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YGI Sbjct: 121 --KLENKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGIF 178 Query: 179 VLLSNCSNNYGPY---HFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P +F + I A++R+ G LY G+ RDW + D+V A + Sbjct: 179 ACNGILFNHESPVRGENFVTRKITRALSRIKLGLQKQLYLGNLDAKRDWGHARDYVEAQW 238 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIV----FEIGFLL----DALIPKSYS-HTELIRFIE 285 L+L++ + E + I + D V E+G L + + K Y + I ++ Sbjct: 239 LILQQ-ELPEDFVIATGVQYSVRDFVNIAATELGMQLQWEGNGVDEKGYDINGNCIVSVD 297 Query: 286 D---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RP D+SK ++++GW P+ + + + + V Sbjct: 298 PRYFRPTEVETLLGDASKARNKLGWQPKTSFQELVKEMV 336 >gi|77464223|ref|YP_353727.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] gi|77388641|gb|ABA79826.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] Length = 328 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 147/334 (44%), Gaps = 56/334 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDIC 60 R++VTGGAG+IGS C+ L + + D L+ Q+ F L + D+ Sbjct: 4 RVLVTGGAGYIGSHACKVL-KRAGFEPVTFDNLSTG--------WEQAVKFGPLARGDLM 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I +AL+ ++P A+++FAA S V S+ + N+ G LLE T ++ Sbjct: 55 DRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEAT------VAA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 K+ F+ ST YG D + ED P P + Y A+K + + +V +G +G+ Sbjct: 109 GVKN---FVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHT 165 Query: 178 -----PVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 V ++ G H PE LIPL + + G L +G DG +RD+ Sbjct: 166 IFRYFNVAGADPEGEVGEQHDPETHLIPLMLD-AVAGRRPALTVFGTDYPTRDGTCIRDY 224 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTE 279 ++V D +A L L R GG N VF + GF + +I +S + T Sbjct: 225 VHVMDLAQAHVLGLN------RLLDGGPNR------VFCLGTGRGFSVREVIEQSRAVTN 272 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I F + R G S + E+GW P+ Sbjct: 273 REVPILFGDRRSGDAAALVCGSERAVRELGWEPE 306 >gi|315156972|gb|EFU00989.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0043] Length = 310 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVIVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|226949379|ref|YP_002804470.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|226843033|gb|ACO85699.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 307 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSDVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPGYLPIDEKHGIRPISYYGLSKYTAEEYIRLFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + + ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SSGS-KERFNIG-------TGVYTSVKELAENMIDIIGLKCN-IEYESARKGDIANSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLKKTIEYYKNN 304 >gi|315231440|ref|YP_004071876.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] gi|315184468|gb|ADT84653.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] Length = 318 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ +V VID L+ AG+LN++K+ F FL+ D+ Sbjct: 1 MKVLVTGGAGFIGSHLVDRLMEQ-GYEVRVIDNLS-AGSLNNIKQWLDHERFEFLKGDLR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +E + A+K+ + + + AA V TN++ T+ LLE R Sbjct: 59 SKEVAKKAVKDVE--VVFHLAANPEVRIGAQSPGLLYETNVLITYSLLEAIR-------- 108 Query: 121 DKKDQFRFLQI-STDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ ++L S+ VYG ED P P S Y K +++ L+ + HT+ I Sbjct: 109 --EEEVQYLVFTSSSTVYGDAKVIPTPEDYAPLEPISVYGGAKLAAEALISGYAHTFDIK 166 Query: 179 VLLSNCSN------NYGP-YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 L+ +N N+G Y F KL + + + + GDG + +L+V D V Sbjct: 167 SLVFRLANIIGERSNHGVIYDFINKL-------KADPNRLEILGDGTQKKSYLHVSDTVE 219 Query: 232 ALYLVLKK----GRIGERYNIGGNN 252 + + +K + + YN+G + Sbjct: 220 GMLFLFEKFKEENKTYDVYNLGSED 244 >gi|311697191|gb|ADQ00063.1| UDP-glucose 4-epimerase [marine bacterium HP15] Length = 343 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 34/337 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQV---D 58 ++TG AGFIGS L +L+ L V+ +D + NL+ ++ + + ++ LQ D Sbjct: 24 LITGAAGFIGSNLLEHLLK-LNQHVIALDNFATGHQSNLDEVRSLVSTEQWTRLQSIEGD 82 Query: 59 ICDRE-CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLW 114 I + E C R+ D +++ AA V RS+ ++ ITTN I G +L R Sbjct: 83 IRNPEDCARACEGV---DYVLHQAALGSVPRSL---NDPITTNAANITGFLNMLVAAR-- 134 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 F ++ YG E+ P SPY+ TK ++ + + Sbjct: 135 -------DAGVKSFTYAASSSTYGDHPALPKVEEKIGKPLSPYAVTKHVNELYAEVFARS 187 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG + N +G P +IP M+ G VF+ GDG+ RD+ ++E+ V Sbjct: 188 YGFKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMVRGEDVFINGDGETSRDFCFIENAV 247 Query: 231 RA--LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 +A L + E YN+ +R ++ +F L AL + + + + RP Sbjct: 248 QANLLAATAEDSARNEVYNV-AVGDRTTLNDLF--AALKSALAENGVVYDKAPVYRDFRP 304 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G R D K S +G+ P+ + G+ K + WYL Sbjct: 305 GDVRHSQADIGKASSRLGYNPEFRIVEGIAKAMPWYL 341 >gi|126696753|ref|YP_001091639.1| UDP-glucose 4-epimerase [Prochlorococcus marinus str. MIT 9301] gi|126543796|gb|ABO18038.1| UDP-glucose 4-epimerase [Prochlorococcus marinus str. MIT 9301] Length = 330 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 156/345 (45%), Gaps = 50/345 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++VTGGAG+IGS C+ LK + VID L GN + +K F ++DI Sbjct: 5 RIVVTGGAGYIGSHFCKTAF--LKGHKTFVIDNLI-TGNYDFIK------WGEFYKLDIR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L + +PD +V+FAA ++V SI ++I+ NI G R S+ Sbjct: 56 EESSFKELLLKIKPDYLVHFAASAYVSESIFKPLDYISNNIDG-------MRSVCKICSE 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG---I 177 K + S+ VYG +E P NP SPY TK + ++ + YG + Sbjct: 109 IK---IPIVFSSSCSVYGEAKNVPINESEPLNPLSPYGETKLFCEKILKWCSNAYGLRWV 165 Query: 178 PVLLSNCSN-----NYGPYHFPEK-LIPLAITRMIE-GSHVFLYG------DGQNVRDWL 224 + N + G H PE +IPLAI + + G + ++G DG VRD++ Sbjct: 166 SLRYFNAAGADEDLEIGEKHDPETHIIPLAIRALGDSGETLKIFGRDYDTFDGTAVRDFI 225 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D H++A+ L +G + +N+G N I +++ L S +L Sbjct: 226 HVMDLASAHLKAIEY-LAEGGMSNIFNLGSGNGT-------SIKSIINGLENISSKQVKL 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 ++ E R D SK KS + W P+ N+++ L W+ Sbjct: 278 -KYCERREEDPSCLFADISKAKSILNWQPEFSNLDNILRSAWKWH 321 >gi|297819200|ref|XP_002877483.1| UDP-xyl synthase 5 [Arabidopsis lyrata subsp. lyrata] gi|297323321|gb|EFH53742.1| UDP-xyl synthase 5 [Arabidopsis lyrata subsp. lyrata] Length = 341 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 87 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 88 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 131 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 188 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 189 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 248 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 249 GLMRLMEGDDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 299 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + GL Sbjct: 300 RQRKPDITKAKEVLGWEPKVKLREGL 325 >gi|126741041|ref|ZP_01756723.1| GDP-mannose-4,6-dehydratase [Roseobacter sp. SK209-2-6] gi|126717805|gb|EBA14525.1| GDP-mannose-4,6-dehydratase [Roseobacter sp. SK209-2-6] Length = 372 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 R ++TG G GS L +L+ +V I + + N + I Q F Sbjct: 3 RALITGITGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHVDQARFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + LK+ QPD + N A+SHV S + + +GT LLE R Sbjct: 62 GDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++Q RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 120 ----GLENQTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ +RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEPCLYMGNIDALRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|294140242|ref|YP_003556220.1| GDP-mannose 4,6-dehydratase [Shewanella violacea DSS12] gi|293326711|dbj|BAJ01442.1| GDP-mannose 4,6-dehydratase [Shewanella violacea DSS12] Length = 375 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 95/357 (26%), Positives = 153/357 (42%), Gaps = 48/357 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQV-D 58 ++TG G GS L L+ + +V I + + N + I Q N FL D Sbjct: 8 LITGVTGQDGSYLAELLL-EKGYEVHGIKRRASSLNTERVDHIYQDSHQENQKFFLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N A+SHV S + + +GT LLE R L Sbjct: 67 LTDSSNLTRILKEVQPDEVYNLGAQSHVAVSFECPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + E P++P SPY+ K + ++V+ + +YG+ Sbjct: 123 GLEKKT--KFYQASTSELYGEVQEIPQKETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G L+ G+ +RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANISQGLEKCLFLGNMDALRDWGHAKDYVRMQW 240 Query: 235 LVLKK-----------GRIGERYNIGGNNERKNIDIVFEIGFLLD--ALIPKSYSHTELI 281 ++L++ +I R + + + I++ F G LD A I + Sbjct: 241 MMLQQETADDFVIATGKQISVREFVTLSAKEAGIELEF-TGEGLDEVATITAITGNDAPA 299 Query: 282 RFIED----------RPGHDRRYAIDSSKIKSEIGWFPQ--------ENMESGLNKT 320 + D RP D +K K ++GW PQ E +E+ LNK Sbjct: 300 LKVGDVIVKVDPRYFRPAEVETLLGDPTKAKEKLGWVPQITVEEMCAEMVENDLNKA 356 >gi|302525548|ref|ZP_07277890.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] gi|302434443|gb|EFL06259.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] Length = 326 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 140/327 (42%), Gaps = 45/327 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++LIVTGGAG++GS +C + + QV V+D L+ G+ +++ ++ F Sbjct: 8 LKLIVTGGAGYVGS-VCAARLIEAGHQVTVVDDLS-TGHADAVHPQAR---FVEGDAAEA 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D +++FAA+S V S+ ++ N++ + LLE + Sbjct: 63 AADLLGEGF-----DGVLHFAAKSLVGESMADPAKYWEGNVVTSLRLLEAMK-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + ST YG D E P P++ Y ATK + D+ + ++ +GI + Sbjct: 110 -KHGTPRLVFSSTAATYGEPDVSPIPETAPTQPTNTYGATKLAIDHAITSFARAHGIAAV 168 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDWLY 225 ++ YG H E LIPL + ++ G H+ +YG D VRD+++ Sbjct: 169 SLRYFNVAGAYGAYGERHATETHLIPL-VLQVATGDREHISIYGDDYPTPDKTAVRDYIH 227 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V D A L L+ GE YN+G +++V + IP + Sbjct: 228 VVDLADAHLLALRHAVEGEHRIYNLGSGTGFSVLEVVEACRRVTGHAIPAVVA------- 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S K E+GW P+ Sbjct: 281 -PRRAGDPSVLVASSDKANGELGWTPK 306 >gi|94314779|ref|YP_587988.1| GDP-D-mannose dehydratase, NAD(P)-binding [Cupriavidus metallidurans CH34] gi|93358631|gb|ABF12719.1| GDP-D-mannose dehydratase, NAD(P)-binding [Cupriavidus metallidurans CH34] Length = 401 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQS--NLFSFLQ 56 R ++TG G GS LC YL+ D +V I + + N ++ L E Q+ Sbjct: 30 RALITGITGQDGSYLCEYLL-DKGYEVHGIKRRSSLFNTERIDHLYEDPQAPDRRLILHH 88 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ +PD + N AA+SHV S + T+ +GT LLE R+ Sbjct: 89 GDMTDTASLVRVVQQSRPDEVYNLAAQSHVQVSFEEPEYTANTDAVGTLRLLEAMRIL-- 146 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 147 ----GMEQSTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYREAYG 202 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI R+ G LY G+ +RDW + D+V Sbjct: 203 MYACNGILFNHESPVRGETFVTRKITRAIARIALGLQEVLYLGNLSALRDWGHARDYVEM 262 Query: 233 LYLVLKK 239 +L+L++ Sbjct: 263 QWLMLQQ 269 >gi|332702016|ref|ZP_08422104.1| GDP-mannose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] gi|332552165|gb|EGJ49209.1| GDP-mannose 4,6-dehydratase [Desulfovibrio africanus str. Walvis Bay] Length = 386 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 43/301 (14%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E +PD I N AA+SHV S + ++ +GT LLE R+ Sbjct: 67 DLTDSTNLIRVMQEVRPDEIYNLAAQSHVKVSFESPEYTANSDALGTLRLLEAMRI---- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L DK Q RF Q ST E+YG + + +E P+ P SPY+ K ++ + + YG+ Sbjct: 123 LGLDK--QTRFYQASTSELYGLVQETPQTEKTPFYPRSPYAVAKLYGYWITVNYREAYGM 180 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A++R++ G L+ G+ RDW + +D+V Sbjct: 181 YACNGILFNHESPMRGETFVTRKITRALSRIVLGLQDKLFLGNMNAKRDWGHAKDYVEMQ 240 Query: 234 YLVLKKGR-------IGERYNI------------------GGNNERKNIDIVFEIGFLLD 268 +L+L++ G ++++ G E + F+ L + Sbjct: 241 WLMLQQDTPDDYVIATGRQFSVRQFVTIAAAELGIELDWRGKGLEEAGVVAGFDAALLRE 300 Query: 269 ALIPKSYSHTELIRFIE--------DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 L H L+ E RP D++K ++++GW P+ + E + + Sbjct: 301 KLNGSCQVHANLVPGTELVAVDPRYFRPTEVESLLGDATKARTKLGWTPRISFEDMVREM 360 Query: 321 V 321 V Sbjct: 361 V 361 >gi|307544988|ref|YP_003897467.1| UDP-glucose 4-epimerase [Halomonas elongata DSM 2581] gi|307217012|emb|CBV42282.1| UDP-glucose 4-epimerase [Halomonas elongata DSM 2581] Length = 332 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/329 (24%), Positives = 151/329 (45%), Gaps = 45/329 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GG G+IGS + + L +V+V+D L+ +E+++ + D+ D Sbjct: 5 ILVVGGCGYIGSHMVKQLARAGN-KVVVLDNLS-----TGFRELAKYG--QLVVGDLGDV 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + +E D +++FAA S V S+ ++ N+ T LL+ + Sbjct: 57 DLLERLFREHSFDGVMHFAANSLVGESVTEPSKYYRNNVGNTLGLLD---------VMVR 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL-- 180 D F+ ST +G ++ E P P +PY A+K + ++ + H YG+ + Sbjct: 108 HDVRHFIFSSTAATFGEPERSPIDERHPQAPINPYGASKLMVEQVLSDYAHAYGLNSVSL 167 Query: 181 --LSNCSNN----YGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 + C + G H PE LIPL I + G + ++G DG VRD+++ Sbjct: 168 RYFNACGADPEGELGECHDPETHLIPL-ILQAASGRRESITVFGRDYATEDGTCVRDYIH 226 Query: 226 VED----HVRALYLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +ED H AL ++L+ R G YN+ GN + ++ V ++ + +++ + + Sbjct: 227 IEDLCSAHALALSMILENRRSGALAYNL-GNGQGFSVQQVIDV---VKSVVARDGCSLK- 281 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 + + RPG D+++ K E+GW P Sbjct: 282 VEEGDRRPGDPAVLVADAARAKEELGWRP 310 >gi|253991810|ref|YP_003043166.1| nad-dependent epimerase/dehydratase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783260|emb|CAQ86425.1| putative nad-dependent epimerase/dehydratase [Photorhabdus asymbiotica] Length = 345 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 31/337 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 ++TG AGFIGS L L+ L V+ +D + NL +K + Q F F++ D Sbjct: 19 LITGVAGFIGSNLLETLL-KLNQNVIGLDNFATGHKHNLEIIKNLITPEQWQKFHFIEGD 77 Query: 59 ICD-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 I + +C ++++ D I++ AA V RSI TNI G +L R Sbjct: 78 IRNLDDCQKASVGV---DYILHQAALGSVPRSIEDPITSNATNISGFLNMLVAAR----- 129 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D + + RF+ ++ YG + E+ NP SPY+ TK +++ + TY + Sbjct: 130 ---DARAK-RFVYAASSSTYGDHPELPKIEERIGNPLSPYAVTKYANELYASVFARTYNL 185 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + N +GP P +IP M+ G +++ GDG+ RD+ +V + V+A Sbjct: 186 QSIGLRYFNVFGPRQDPNGSYAAVIPKWTATMLAGEQIYINGDGKTSRDFCFVANAVQAN 245 Query: 234 YL---VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RP 288 L + I + YN+ +++ ++ +FE+ + L+ +++ ++ I R Sbjct: 246 ILAATTINHNAINQVYNVAI-SQQTTLNELFEM--IKSELVANNFNDDNILPAIHRDFRK 302 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G R D +K + +G+ P + G+ WYL Sbjct: 303 GDVRHSLADINKASNLLGYKPTHTIRQGIKLATQWYL 339 >gi|315427552|dbj|BAJ49152.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 318 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 148/328 (45%), Gaps = 44/328 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TG GF+G L YL + V +++S +I ++D+ Sbjct: 14 MKVLITGSEGFVGRHLREYLGGRGYVVV--------GADISSGADI---------RMDVT 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ + +A+V+ AA + + S+ N+ G+ +LE + Sbjct: 57 DFDSVLKTFEQNRFEAVVHLAAVADIPLSMRDPHRCFKVNVYGSLNVLE---------AA 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + S+ YG+ K +ED P NP +PY +K + + + ++ +G+P+ Sbjct: 108 RRIGVRRVVVFSSANYYGAPVKLPVTEDTPPNPRTPYDYSKVALENVAWSYHRNHGVPIT 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL-VLKK 239 + +G Y EK++P + + + L+ G +V D +V++ A+ L ++K Sbjct: 168 VLRPWKAFGEYEPGEKMVPRFVKACLASEPIPLFNGGADVTDPYHVDNLCHAVELGLIKD 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFL------LDALIPKSYSHTELIRFIEDRPGHDRR 293 +GE +N+G N ++ +I L L+ L P++ + ++ I Sbjct: 228 EAVGEAFNVGTGNALSVRELAEKIKQLTNSSSKLETLPPRTPAEATPMKSIP-------- 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 KI +++G+ PQ ++E GL + + Sbjct: 280 ---SIKKIATKLGYTPQVSLEQGLKRVI 304 >gi|325110971|ref|YP_004272039.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] gi|324971239|gb|ADY62017.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] Length = 356 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 32/328 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L LV QV V D L G +L + F ++ D+ D Sbjct: 33 LVTGGAGFIGSHLASALVAQGN-QVRVFDNLC-TGRKKNLAHLD--GQFEWIHGDVRDLA 88 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ D + + AA + V SI E + GT +L+ R + Sbjct: 89 AVEKAVAGV--DVVYHQAALASVPLSIEKPLEVHDVCVTGTVNVLDAAR---------RL 137 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPS--SPYSATKASSDYLVLAWGHTYGIPVLL 181 R + ++ YG D+ + + P SPY+A K +++ ++ Y + + Sbjct: 138 GVKRVVYAASSAAYG--DRPEMPKRESHTPQTLSPYAAAKLAAELYCESFAECYDLETVR 195 Query: 182 SNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV- 236 N +GP P +IPL +T +++G ++GDG RD++YV D V+A L Sbjct: 196 LRYFNVFGPRQDPNSPYSAVIPLFVTALLQGKTPRIFGDGSQSRDFVYVGDVVQANLLAG 255 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 G G YN+ +++ +I +LD + F R G Sbjct: 256 HADGASGNVYNVATGERVSVAEMLKQICDVLDVPF--------MPEFCPPRAGEVMHSWA 307 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + ++G+ P +GL KTV Y Sbjct: 308 DISATQRDLGYSPATPFATGLAKTVEAY 335 >gi|46487626|gb|AAS99167.1| DmhA [Escherichia coli] Length = 342 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 32/326 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDK-LTYAGNLNSLKEISQSNLFSFLQ-VDIC 60 +++TG G +GS L Y++ + V+ + + N+ L + F+Q D+ Sbjct: 4 VLITGFTGQVGSQLADYILENTTDTVIGMMRWQEPMDNIYHLTDRINKKDRVFIQYADLN 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ +P I + AA+S S E + TNIIGT LLE + Q Sbjct: 64 DYTSMYNLIEAKRPKFIFHLAAQSFPRTSFDIPIETLQTNIIGTANLLECIK---KLKQQ 120 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D D + S+ EVYG G +ED ++ +SPYS +K +DYL +G YG+ Sbjct: 121 DGYDPVVHV-CSSSEVYGRAKVGEALNEDTQFHGASPYSISKIGTDYLGRFYGEAYGLRT 179 Query: 180 LLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHV---FLYGDGQNVRDWLYVEDHVRAL 233 ++ + GP F E + I +IE H G+ +VR + D VRA Sbjct: 180 FITRMGTHTGPRRSDVFFESTVAKQIA-LIEAGHQEPKLKVGNLASVRTFQDARDAVRAY 238 Query: 234 YLVL---KKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-- 286 YL+ +KG + GE +NI G F++ ++D L+ S+S + I + D Sbjct: 239 YLLALESEKGNVPFGEAFNIAGEE-------AFKLPEVIDLLL--SFSTRDDIEVVTDTD 289 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++KI++ I W P+ Sbjct: 290 RLRPIDADYQMFDNTKIRNFIDWKPE 315 >gi|83594582|ref|YP_428334.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] gi|83577496|gb|ABC24047.1| dTDP-glucose 4,6-dehydratase [Rhodospirillum rubrum ATCC 11170] Length = 314 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 142/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ VL +D + G ++ + + F ++ D+ Sbjct: 6 RVLVTGGAGFLGSHLCERLIGQ-GCDVLCVDNF-FTGQRENVAHLIGNPYFELMRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G L L Sbjct: 62 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGAINL----------LGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG +ED P P + Y K ++ L + + Sbjct: 107 KRTKARILQASTSEVYGDPTIHPQTEDYRGNVNPIGPRACYDEGKRCAETLFFDYHRQFA 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 + + + N YGP P+ +++ I + + G + LYGDG R + YV+D + + Sbjct: 167 LDIKVIRIFNTYGPRMHPDDGRVVSNFILQALRGQPISLYGDGLQTRSFCYVDDLIDGML 226 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 ++ G N+G +E I L + +I + S ++L+ P D Sbjct: 227 AFMATPPSEPGP-LNLGNPHE-------ITIRALAEKIIAMTGSASDLV--FHPLPADDP 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D +K ++ + W P ++E GL +T+ ++ Sbjct: 277 RQRRPDITKARALLDWAPTIDVEDGLGRTIEYF 309 >gi|295132938|ref|YP_003583614.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zunongwangia profunda SM-A87] gi|294980953|gb|ADF51418.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zunongwangia profunda SM-A87] Length = 314 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 142/336 (42%), Gaps = 34/336 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS-QSNLFSFLQV 57 M+++VTG AGFIGS L N +V+ +D + Y L L S + N +V Sbjct: 2 MKVLVTGAAGFIGSHAAEAL-NKEGYEVVGLDNFSDYYDVRLKELNTDSLRKNNIQVKKV 60 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ E + +F D I++FAA+ + S D+++ N+I T L+E Sbjct: 61 DLRKPEDFKKLTSDF--DFIIHFAAQPGISSSST-FDQYLQNNVIATQNLIE-------- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K F IST VYG + F ED P+S Y TK +++ LVLA + Sbjct: 110 FAHQNKKLKHFFNISTSSVYGL--EATFPEDAAAQPASFYGVTKLAAEQLVLAESRAKRL 167 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLV 236 + YGP PEKL I L+ G +++R + YV D + L Sbjct: 168 NSSSLRLYSVYGPRERPEKLYTKLIACAFNNEKFPLFSGSQKHLRSFTYVGDIIEGLLSA 227 Query: 237 LKKGRI--GERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 +KK GE N+G E ++ ID V E LL I + R G Sbjct: 228 VKKHHELNGEIINLGTEAEYTTQEGIDYVEE---LLGKKIE--------LEVKPRRKGDQ 276 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +K K + + P ++ GL + + WY N Sbjct: 277 WHTRANINKAKKILDYHPTTTLKDGLQRQINWYKAN 312 >gi|119513231|ref|ZP_01632276.1| CDP-tyvelose epimerase [Nodularia spumigena CCY9414] gi|119462125|gb|EAW43117.1| CDP-tyvelose epimerase [Nodularia spumigena CCY9414] Length = 353 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 54/355 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK------LTYAGNLNSLKEISQSNLFSFL 55 +L++TG +G IGS +C Y N Q+ +D G+ ++ QS L F+ Sbjct: 3 KLLITGSSGLIGSEVCVYFANQ-GWQIHGVDNNQRSVFFGEQGDTRWNQQRLQSTLKGFV 61 Query: 56 --QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 ++DI DR+ + + ++ QPDAIV+ AA+ DR+ + TN +GT LLE R Sbjct: 62 HHELDIRDRQGVLNLIESLQPDAIVHTAAQPSHDRAAAIPFDDFDTNAVGTLNLLEAARQ 121 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYG---------------SLDKGLFSEDMPYNPS---- 154 + + F+ +ST++VYG D + E +P S Sbjct: 122 FCP--------ESPFVHMSTNKVYGDRPNTIKLKELDTRWDYDDPTYQEGIPETFSIDQS 173 Query: 155 --SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIEGS 209 S + A+K ++D +V +G + +P GP H +L + + +E Sbjct: 174 KHSLFGASKVAADVMVQEYGRYFNMPTCCLRGGCLTGPNHSGVELHGFLSYLVKCNLEER 233 Query: 210 HVFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 ++G G+ VRD ++ D R + + RI E YN+GG + N + E L+ Sbjct: 234 EYKIFGYKGKQVRDNIHSLDVARFIEAFIDNPRIAEVYNLGGG--KLNSCSILEAFQLV- 290 Query: 269 ALIPKSYSHTEL--IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + YS+ E+ E+R G Y D SK++ +P ++ L++T+ Sbjct: 291 ----QKYSNQEMKYTYVPENRIGDHICYYSDLSKMRQH---YPNWDISISLDETI 338 >gi|87045843|gb|ABD17740.1| NAD-dependent epimerase/dehydratase family [Methanococcus voltae PS] Length = 327 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 40/338 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IVTGGAGFIGS + L+ + +V+ ID + G L++++ + + F +DI Sbjct: 1 MKAIVTGGAGFIGSHMVELLLKN-DYEVIAIDNMA-NGQLDNVEIFKDNPNYHFENIDIA 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ K+ D + + AA + + SI ++ N+ GT +LE R Sbjct: 59 -KDFNDEIFKDV--DYVFHMAALADIVPSIEEPIKYHEANVTGTVRILEACR-------- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + + ++ YG D SE+ P PY+ TK + VL W Y +P + Sbjct: 108 -KYNIKKLVYSASSSCYGIPDNYPTSEEDNIRPEYPYAFTKYIGEEYVLFWNKLYKLPAV 166 Query: 181 LSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N YG + + + + +E + + GDG+ RD+ YV D +A L Sbjct: 167 SLRYFNVYGTRARTNGTYGAVFKVFLKQKLEDEPLTIVGDGEQTRDFTYVTDIAKANLLA 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLD--ALIPKSYSHTELIRFIEDRPGHDRRY 294 GE N+G + + + G + D IPK RPG Sbjct: 227 AISELNGEVLNVGTGKPQS---VNYLAGLISDKKTQIPK-------------RPGEPDST 270 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + KI ++ W P+ + E G V LDN +W+ Sbjct: 271 HANIDKITEKLNWQPEVSFEDG----VQIMLDNIDYWK 304 >gi|83589532|ref|YP_429541.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] gi|83572446|gb|ABC18998.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] Length = 337 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 51/337 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DIC 60 +++VTGGAG+IGS + + L + +VL D L + + L+ L V D+ Sbjct: 3 KVLVTGGAGYIGSHVVKAL-GERGYRVLTYDSL--------VTGHPWAVLYGDLVVGDLL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +++F+PDA+++FAA V S+ ++ N+ GT LL +C+ + Sbjct: 54 DAAKLEAVIRDFRPDAVMHFAAHIVVPESVAQPLKYYINNVQGTLNLL-------ACMQK 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 ++ F S+ VYG ++ E+ P +P +PY +KA + ++ GI + Sbjct: 107 SGVNKLIFS--SSAAVYGIPERIPVPEEAPLHPINPYGHSKAMVERILQDLSAAGGITYV 164 Query: 181 LSNCSNNYGP---------YHFPEKLIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 N G LI LA TR G +L +G DG +RD+ Sbjct: 165 SLRYFNVAGADRDGRIGEGKEDATHLITLA-TRTAAGKRPYLSVFGTDYPTPDGTCIRDY 223 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++VED HV AL +L G+ E +N G ++++ + P Sbjct: 224 IHVEDLAAAHVLALEYLLDGGK-SEVFNCGYGRGYSVLEVIAAAKKVTGVDFP------- 275 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMES 315 +R+ RPG D+ KI+ +GW P +N+E Sbjct: 276 -VRYEGRRPGDPPALVADARKIRERLGWVPAYDNLEG 311 >gi|29654027|ref|NP_819719.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii RSA 493] gi|153207377|ref|ZP_01946114.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii 'MSU Goat Q177'] gi|154706196|ref|YP_001424103.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii Dugway 5J108-111] gi|161831044|ref|YP_001596611.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii RSA 331] gi|165918472|ref|ZP_02218558.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii RSA 334] gi|212212836|ref|YP_002303772.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii CbuG_Q212] gi|212219082|ref|YP_002305869.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii CbuK_Q154] gi|14600145|gb|AAK71268.1|AF387640_14 GDP-D-mannose dehydratase [Coxiella burnetii] gi|29541293|gb|AAO90233.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii RSA 493] gi|120576686|gb|EAX33310.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii 'MSU Goat Q177'] gi|154355482|gb|ABS76944.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii Dugway 5J108-111] gi|161762911|gb|ABX78553.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii RSA 331] gi|165917840|gb|EDR36444.1| GDP-mannose 4,6-dehydratase [Coxiella burnetii RSA 334] gi|212011246|gb|ACJ18627.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii CbuG_Q212] gi|212013344|gb|ACJ20724.1| GDP-mannose 4,6 dehydratase [Coxiella burnetii CbuK_Q154] Length = 348 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 18/248 (7%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEI----SQSNLFSFLQ 56 + +TG G GS L L+ D ++ ++ + + + N L +I + N FL Sbjct: 4 KAFITGITGQDGSYLAELLLRKDYEVHGMI--RRSSSFNTERLSDIYEEKHKENARLFLH 61 Query: 57 V-DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 DI D + + E +P + N AA+SHV S + T +GT +LE + Sbjct: 62 YGDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIK--- 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D + RF Q S+ E+YG + +E P+NP SPY+ K + Y + + +Y Sbjct: 119 ---NADNAKEIRFYQASSSEMYGDVKSVPQTESTPFNPRSPYACAKVFAHYQTINYRESY 175 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ N+ P F + I I +++ G +Y G+ + RDW Y +D+V Sbjct: 176 GLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVE 235 Query: 232 ALYLVLKK 239 A++L+L++ Sbjct: 236 AMWLMLQQ 243 >gi|307286875|ref|ZP_07566957.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] gi|306502090|gb|EFM71376.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] Length = 310 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ + V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-EYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSIFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|242091892|ref|XP_002436436.1| hypothetical protein SORBIDRAFT_10g002550 [Sorghum bicolor] gi|241914659|gb|EER87803.1| hypothetical protein SORBIDRAFT_10g002550 [Sorghum bicolor] Length = 374 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 22/270 (8%) Query: 47 SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI 106 S L D+ D +R L PD + N AA+SHV S D G Sbjct: 85 SPRPLMQLHYADLTDSSSLRRVLDAVSPDEVYNLAAQSHVAVSFEVPDYTADVTATGALS 144 Query: 107 LLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDY 166 LLE RL + R+ Q + E++GS SED P++P SPY+A+K ++ + Sbjct: 145 LLEAVRL--------SRKPIRYYQAGSSEMFGSTPPPQ-SEDTPFHPRSPYAASKVAAHW 195 Query: 167 LVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNV 220 + + YGI VL ++ S G +F + I A+ R+ G + VFL G+ Sbjct: 196 YTVNYREAYGIFACNGVLFNHESPRRG-ENFVTRKITRAVGRIKLGLQTKVFL-GNLSAA 253 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 RDW + D+V A++L+L++ + + + E ++ + F L K + + Sbjct: 254 RDWGFAGDYVEAMWLMLQQDQPAD--YVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDK 311 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 F RP DS+K + + W P+ Sbjct: 312 KYF---RPAEVDSLKGDSTKARKVLKWKPK 338 >gi|228901999|ref|ZP_04066165.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] gi|228857682|gb|EEN02176.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 4222] Length = 300 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 36/310 (11%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N + NL +Q DI D++ + + D + AA Sbjct: 4 KHEVWILDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLVAQLFENNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ CL+ D K F +ST VY DK Sbjct: 64 NVQDSIDDARATFENDTIGTFNLLEQ------CLNYDVKMVF----MSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNE 253 + + I ++ + +YGDG+ RD LYVED V A Y G I G + Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIIN----AGTGQ 226 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +I+ + E LI + + + I + ++ + K K+ + W P+ ++ Sbjct: 227 DISINKLAE-------LISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKVSL 278 Query: 314 ESGLNKTVCW 323 E G+ KT W Sbjct: 279 EDGVIKTEEW 288 >gi|154175190|ref|YP_001407694.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter curvus 525.92] gi|112803654|gb|EAU00998.1| NAD dependent epimerase/dehydratase family [Campylobacter curvus 525.92] Length = 352 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 68/368 (18%) Query: 1 MRLIVTGGAGFIGSALCRYL------------VNDLKIQVLVIDKLTYAG----NLNSLK 44 M+++VTG AGFIG L L +ND L +L AG + + K Sbjct: 1 MKILVTGTAGFIGFHLANALAARGDEVVGFDNINDYYDVNLKFARLKTAGFDTNEIAAGK 60 Query: 45 EIS---QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 +I + NL SF++ D+ + ++ E + DA+VN AA++ V S++ +I N+ Sbjct: 61 QIRSKMKPNL-SFVKGDLQEARLLKRLFGEHKFDAVVNLAAQAGVRYSLINPQAYIDANV 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPS 154 G +LE C + + S+ VYG +E+MP+ +P Sbjct: 120 TGFLNILE-------CCRHNATPNLVY--ASSSSVYG------LNENMPFSTHEGVNHPI 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY 214 S Y+ATK S++ + + H +G+P YGP+ P+ + L + + G + ++ Sbjct: 165 SLYAATKKSNEMMAHTYSHLFGVPTTGLRFFTVYGPWGRPDMALFLFVKAALSGGTIDVF 224 Query: 215 GDGQNVRDWLYVEDHVRA-LYLVLKKGRIGER-----------------YNIGGNNERKN 256 G+ RD+ Y++D V+ + V R YNIG N+ + Sbjct: 225 NYGKMKRDFTYIDDIVKGVMKCVDNPARANAAWDAKAPDPASSSAPFKIYNIGNNSPVEL 284 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 +D + I + I K+ F+ + G D S + ++ + P ++ G Sbjct: 285 MDYIKAIELKIGREINKN--------FLPLQAGDVPATYADVSDLIADFDYKPNTSVNEG 336 Query: 317 LNKTVCWY 324 + + + WY Sbjct: 337 VARFIEWY 344 >gi|293389039|ref|ZP_06633518.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|312910521|ref|ZP_07769364.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] gi|291081615|gb|EFE18578.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|311289183|gb|EFQ67739.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] Length = 319 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ ++V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAIVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|218676516|ref|YP_002395335.1| UDP-glucose 4-epimerase [Vibrio splendidus LGP32] gi|218324784|emb|CAV26468.1| UDP-glucose 4-epimerase [Vibrio splendidus LGP32] Length = 337 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 60/360 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M ++VTGG G+IGS ++N VL D L Y + L+ I + + F++ D Sbjct: 1 MNVLVTGGMGYIGSHTSIQMINAGMTPVL-FDNL-YNSKPSVLERIEKVSGVRPDFIEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +K+ +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKALLTETMKQHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 D + S+ VYG +ED P + ++PY +K A+ D+ Sbjct: 113 ---DADVKTLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMIEECLTDFQNANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ S G P P L+P ++++ G FL +G D Sbjct: 170 SITLL--RYFNPVG-SHPSGELGEDPSGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D H+ AL V +K + YN+G N +D+V IP Sbjct: 226 GTGVRDYIHVMDLSDGHIAALEKVGRKDGL-HIYNLGTGNGSSVLDMVKAFEKASGQAIP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +E RPG D +K + E+GW +T+ ++ W W+ Sbjct: 285 --------YKLVERRPGDIAECWADPAKAQKELGW--------NATRTLAEMTEDTWRWQ 328 >gi|15231432|ref|NP_190228.1| UXS5; UDP-glucuronate decarboxylase/ catalytic [Arabidopsis thaliana] gi|79314469|ref|NP_001030820.1| UXS5; UDP-glucuronate decarboxylase/ catalytic [Arabidopsis thaliana] gi|6522623|emb|CAB62035.1| dTDP-glucose 4-6-dehydratases-like protein [Arabidopsis thaliana] gi|18175746|gb|AAL59920.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] gi|20465507|gb|AAM20236.1| putative dTDP-glucose 4-6-dehydratases [Arabidopsis thaliana] gi|21592727|gb|AAM64676.1| dTDP-glucose 4-6-dehydratases-like protein [Arabidopsis thaliana] gi|110737127|dbj|BAF00515.1| dTDP-glucose 4-6-dehydratases-like protein [Arabidopsis thaliana] gi|222424413|dbj|BAH20162.1| AT3G46440 [Arabidopsis thaliana] gi|332644637|gb|AEE78158.1| UDP-XYL synthase 5 [Arabidopsis thaliana] gi|332644638|gb|AEE78159.1| UDP-XYL synthase 5 [Arabidopsis thaliana] Length = 341 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 87 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 88 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 130 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 131 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 188 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 189 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 248 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 249 GLMRLMEGDDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 299 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + GL Sbjct: 300 RQRKPDITKAKEVLGWEPKVKLREGL 325 >gi|283832524|ref|ZP_06352265.1| GDP-mannose 4,6-dehydratase [Citrobacter youngae ATCC 29220] gi|291072191|gb|EFE10300.1| GDP-mannose 4,6-dehydratase [Citrobacter youngae ATCC 29220] Length = 373 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SN-LFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q SN F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSSNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N A SHV S + + IGT LLE R L Sbjct: 65 LTDSSNLTRILKEVQPDEVYNLGAMSHVAVSFDSPEYTADVDAIGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|302541353|ref|ZP_07293695.1| UDP-glucose 4-epimerase [Streptomyces hygroscopicus ATCC 53653] gi|302458971|gb|EFL22064.1| UDP-glucose 4-epimerase [Streptomyces himastatinicus ATCC 53653] Length = 328 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 140/337 (41%), Gaps = 50/337 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IGS + R + + +V V+D ++ +G L E ++ Sbjct: 1 MTWLITGGAGYIGSHVVRAMARAGE-RVAVLDDIS-SGIPERLPED-----VPLVRGSTL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + E +V+ AA+ V S+ + N+ G +LLE + Sbjct: 54 DRELLDRTFAELNITGVVHLAAKKQVGESVEQPLRYYRENVHGLTVLLE---------AV 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG D L +ED P P +PY TK + ++LV A G + I Sbjct: 105 AAAGIGSFLFSSSAAVYGMPDVELVTEDTPCVPMNPYGETKLAGEWLVRAVGAAHSISTA 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE +IP+ R+ G ++G DG +RD+++VE Sbjct: 165 CLRYFNVAGATR-PELSDTGVFNIIPMMFERITHGEAPRIFGDDYPTPDGTCIRDYIHVE 223 Query: 228 DHVRALYLVLKK--GRIGE---RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D A V ++ R G NIG G + R+ D++ E+ E Sbjct: 224 DLASAHLAVARRLAARPGAGDLTVNIGTGQGVSVREMADLIAEV-----------TGRRE 272 Query: 280 LIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENMES 315 +E RPG R + I E+GW + ++ + Sbjct: 273 PAPVVEPRRPGDPARVVGSTDLIAKELGWSARHDVRA 309 >gi|226509148|ref|NP_001149057.1| GDP-mannose 4,6 dehydratase 2 [Zea mays] gi|195624368|gb|ACG34014.1| GDP-mannose 4,6 dehydratase 2 [Zea mays] Length = 377 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 22/260 (8%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 98 ADLSDSSSLRRALDAISPDEVYNLAAQSHVAVSFEIPDYTADVTATGALRLLEAVRL--- 154 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + R+ Q + E++GS ED P++P SPY+A K ++ + + + YG Sbjct: 155 -----SRKPMRYYQAGSSEMFGSTPPPQ-REDTPFHPRSPYAAAKVAAHWYTVNYREAYG 208 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 + VL ++ S G +F + I A+ R+ G + VFL G+ RDW + D+V Sbjct: 209 VFACNGVLFNHESPRRG-ENFVTRKITRAVGRIKVGLQTRVFL-GNLSAARDWGFAGDYV 266 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++L+L++ + G+ + E ++ + F L K + + F RP Sbjct: 267 EAMWLMLQQEQPGD--YVVATEESHTVEEFLQAAFGYAGLSWKDHVVIDKKYF---RPAE 321 Query: 291 DRRYAIDSSKIKSEIGWFPQ 310 D++K + + W P+ Sbjct: 322 VDSLKGDATKARKVLKWKPK 341 >gi|220920476|ref|YP_002495777.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219945082|gb|ACL55474.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 372 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 68/366 (18%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVL--VIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIG A+ R LV +++VL +ID++ G L ++ + + D+ Sbjct: 5 ILITGGAGFIGRAVARALVARGDRVRVLDSLIDQVH--GGLGRPDDLPDA--VDLRRGDV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +L D +++ AAE V +S+ + +++ N +GT +L + + Sbjct: 61 RDPAAVAQSLIGI--DKVIHLAAEVGVGQSMYAVERYVSVNDLGTAVLFQ---------A 109 Query: 120 QDKKDQFRFLQISTDEVYGSL----DKGLFSEDM----------PYNP------------ 153 ++ R + S+ VYG +G ED+ P++P Sbjct: 110 LIERPVQRVVVASSMSVYGEGLYRDSEGALIEDVARQPRSGPEAPWDPLDARGRPLKPVP 169 Query: 154 ---------SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPL 200 +S Y+ +K + + L L YG+ + N YGP ++ + Sbjct: 170 TPEWKRPALASVYALSKYAQERLTLMLAPAYGMEGVALRLWNAYGPGQALSNPYTGVLAI 229 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL-KKGRIGERYNIGGNNERKNIDI 259 +R+ G+ ++ DG +RD++ V+D +A L L ++ G+ YNIG R Sbjct: 230 FASRLHNGAAPVIFEDGHQLRDFVQVDDVAQAFLLALDRREAAGQVYNIGSGEYRS---- 285 Query: 260 VFEIGFLLDALIPKSYSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 V E+ LL ++ T+++ I R G R D K K+E+G+ P+ + GL Sbjct: 286 VREVATLL----ARAMGRTDIVPEIAGKMRAGDIRHCIPDIGKAKAELGYAPRRDFADGL 341 Query: 318 NKTVCW 323 + W Sbjct: 342 AELAAW 347 >gi|116754369|ref|YP_843487.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] gi|116665820|gb|ABK14847.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] Length = 409 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 24/269 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-SLKEISQSNLFSFLQVDICD 61 +++TG +GF+GS + R LV D V + + G + +L+ + ++ D+ + Sbjct: 8 ILITGVSGFVGSRMARRLV-DAGASVYGLVRRRSDGRMPVNLERLGIKKDVRLIEGDLEN 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW---WSCL 118 I +A+ PD I + AA+S V RS + +E + N GT LLE RL + + Sbjct: 67 ISSIGNAITASDPDIIFHLAAQSFVPRSFVDPNETMLCNCWGTSNLLEAVRLKDVDATVV 126 Query: 119 SQDKKDQFRFLQISTDEVYG-SLDK--GLF-----------SEDMPYNPSSPYSATKASS 164 +++ L IS++E Y +L+K +F SE P P SPY+ +K Sbjct: 127 FAGSSEEYG-LVISSEEQYKRALEKYGAVFPEPERIPELPISETNPLRPMSPYAVSKVYG 185 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGS-HVFLYGDGQNV 220 DYL+ + H+YGIP ++S N+ G F +I + ++ G G+ Sbjct: 186 DYLMRNYWHSYGIPTVVSRAFNHEGAGRGIMFVTSVITSQVMKLKLGEIDGITIGNVNAF 245 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIG 249 RDW +V+D + L+ K + G+ YN G Sbjct: 246 RDWSHVDDIIDGYILLAVKAKRGDVYNQG 274 >gi|319902334|ref|YP_004162062.1| NAD-dependent epimerase/dehydratase [Bacteroides helcogenes P 36-108] gi|319417365|gb|ADV44476.1| NAD-dependent epimerase/dehydratase [Bacteroides helcogenes P 36-108] Length = 311 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++V+GGAGFIGS LC L+ D QV+ +D L + G+ ++ + + LF F+ D+ Sbjct: 3 KILVSGGAGFIGSHLCTRLMKDGH-QVICLDNL-FTGSEENIAHLKGNPLFEFVHHDV-- 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E SA D I N A + A + I T+++G +LE Sbjct: 59 -EYPYSA----DVDEIYNLACPASPIHYQYDAIKTIKTSVLGAINMLELA---------- 103 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 KK + + LQ ST EVYG E+ P S Y K ++ L + + G Sbjct: 104 KKVKAKILQASTSEVYGDPVVHPQVENYWGNVNPVGIRSCYDEGKRCAETLFMDYHRQNG 163 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ + + ++ + +YG G R + YV+D + + Sbjct: 164 VRIKIIRIFNTYGPRMLPNDGRVVSNFVVQALQNQGITIYGSGNQTRSFQYVDDLIEGMI 223 Query: 235 LVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 ++ + IG N+G +E F I L + ++ + S +EL+ + P D Sbjct: 224 RMMDTEDDFIGP-VNLGNPHE-------FSILELAEKVVKLTNSKSELV--FKPLPHDDP 273 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + + ++ W P +E GL + + ++ Sbjct: 274 RQRKPDITLAREKLNWKPTTELEDGLRRIIEYF 306 >gi|149199217|ref|ZP_01876255.1| putative dTDP-glucose 4,6-dehydratase protein [Lentisphaera araneosa HTCC2155] gi|149137642|gb|EDM26057.1| putative dTDP-glucose 4,6-dehydratase protein [Lentisphaera araneosa HTCC2155] Length = 323 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 43/334 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGF+GS LC L+N+ V+ +D L N +S S+ F F++ DIC Sbjct: 11 ILVTGGAGFLGSHLCDRLINEGH-NVICLDNLQTGYKQNVAHLLSHSS-FEFIRHDIC-- 66 Query: 63 ECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E IR + D I N A + H + +G + T ++G+ + L Sbjct: 67 ETIR-----LEVDEIYNLACPASPPHYQNNPVGTTK---TCVLGSI----------NMLG 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 K++ + LQ ST EVYG E+ P + Y K ++ L + Sbjct: 109 LAKRNNAKILQASTSEVYGDPKVHPQVEEYRGDVNPIGIRACYDEGKRCAETLFFDYHRQ 168 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + + N YGP P+ +++ I + ++G + +YGDG R + + +D + Sbjct: 169 HGVKIKVMRIFNTYGPKMDPDDGRVVSNFIVQALQGKDITIYGDGSQTRSFCFKDDLLDG 228 Query: 233 LYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ I NIG +E F I L + +I + + +++I + P D Sbjct: 229 MQALMNSDDAITGPINIGNPDE-------FTIKELAEEVIRQVDTTSQII--YKPLPADD 279 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + K K + W P + GL T+ ++ Sbjct: 280 PTRRKPNIEKAKEILNWQPSIKLSEGLKPTIAYF 313 >gi|326772080|ref|ZP_08231365.1| NAD-dependent epimerase/dehydratase family protein [Actinomyces viscosus C505] gi|326638213|gb|EGE39114.1| NAD-dependent epimerase/dehydratase family protein [Actinomyces viscosus C505] Length = 364 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 52/356 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG A+ L + +V+ +D + + + + ++D+ E Sbjct: 6 LVTGGAGFIGCAISHDLADAFD-RVVALDNMHPQIHPSQARPAELDERVELRRLDVSVAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 S L E PDAIV+ AAE+ +S+ A N++GT +L+ L + + Sbjct: 65 DWDSLLPEVAPDAIVHLAAETGTGQSLTEASRHANVNVVGTTQMLD-------ALVRHEI 117 Query: 124 DQFRFLQISTDEVYGS--------------------LDKGLF-----------SEDMPYN 152 + + S+ VYG L+ G + S ++ + Sbjct: 118 RPDKIVLASSRAVYGEGKWADAAGHPSYPGQRTHAMLEAGQWDFTGLTPSVQSSTEVKAS 177 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMI-EG 208 P++ Y+ATK + LV +W ++ + +L N YGP P I R+ +G Sbjct: 178 PANVYAATKFCQENLVTSWCGSFDVTPVLFRLQNVYGPGQSLINPYTGIVSLFARLAKQG 237 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYL-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 + +Y DGQ VRD+++++D A+ VL+ Y+IG + + I Sbjct: 238 QSIPVYEDGQIVRDFVFIDDVASAIVAGVLRSPATSTPYDIGLGERTTIMQVAQAIAEHY 297 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A P + R G R D+++ + + W P+ + G+N+ W Sbjct: 298 GAPAPHVTG--------QFRDGDVRAAWADTARARQALDWEPRIGVTEGINRLCDW 345 >gi|16329177|ref|NP_439905.1| GDP-D-mannose dehydratase [Synechocystis sp. PCC 6803] gi|1651657|dbj|BAA16585.1| GDP-D-mannose dehydratase [Synechocystis sp. PCC 6803] Length = 362 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 23/318 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE--ISQSNLFSFLQV--- 57 +++TG G GS L L+ QV I + T N + + + +L + L++ Sbjct: 7 VLLTGITGQDGSYLSELLLEK-GYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLHYG 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L++ +P I N A+SHV S + + + +GT LLE R + Sbjct: 66 DLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDY--- 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q RF Q + E++G + + E P+ P SPY+ K + + + +Y + Sbjct: 123 -QHRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYDL 181 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I AI R++ G+ LY G+ + RDW Y +D+VRA+ Sbjct: 182 FACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRAM 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD 291 + +L++ + + + E + EI F L ++Y + F E RP Sbjct: 242 WAMLQQEQPDD--YVVATGETHEVKEFLEIAFGYVNLNWQNY-----VAFDERYLRPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFP 309 D +K K+++GW P Sbjct: 295 DLLIGDPAKTKAQLGWEP 312 >gi|324520609|gb|ADY47678.1| UDP-glucose 4-epimerase [Ascaris suum] Length = 346 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 58/350 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-----GNLNSLKEISQ--SNLFS 53 M++++TG AGFIGS + L+ + +++ +D + + GN SLK +SQ Sbjct: 1 MKILLTGAAGFIGSHVAVELI-EAGYEIVCVDNFSNSVQDADGNAVSLKRVSQIVGKEVP 59 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F+ D C+ E + + K+FQ D +V+ A V S+ E+ N+ + +LL+ R Sbjct: 60 FIFADCCNEEQLEAVFKKFQLDGVVHLAGLKAVGESVEKPLEYYRNNLFASLVLLQLCR- 118 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP--YNPSSPYSATKASSDYLVLAW 171 K F+ S+ VYG +E P + ++PY TK + +++ Sbjct: 119 --------KYGVKNFVFSSSATVYGPPQHLPITEKDPVGHGITNPYGQTKYMIEQMLMDL 170 Query: 172 GHT----------YGIPVLLSNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG 215 Y PV ++ S G P P L+P +AI R+ H+ +YG Sbjct: 171 SKAEKDWNIILLRYFNPV-GAHPSGMIGEDPKGIPNNLMPFVSQVAIGRL---PHLVVYG 226 Query: 216 ------DGQNVRDWLYVED----HVRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIG 264 DG VRD+++V D HV A + K G +G E YN+G +++V + Sbjct: 227 NKFPTLDGTGVRDYIHVVDLARGHVAAFDRIQKMGNLGCEVYNLGTGRGYSVLEMVHALE 286 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + +P + RPG D S ++GW Q +E Sbjct: 287 SVSGRKVPT--------KIGVPRPGDVASVYCDPSLAAEKLGWRCQFGLE 328 >gi|315122247|ref|YP_004062736.1| UDP-glucose 4-epimerase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495649|gb|ADR52248.1| UDP-glucose 4-epimerase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 351 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 94/346 (27%), Positives = 154/346 (44%), Gaps = 48/346 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDICD 61 + V GGAG+IG+ CR L+++ +V+D L+ +G+ ++ L+ L QVDI D Sbjct: 14 VFVVGGAGYIGAHTCR-LLSERGFLPIVLDNLS-SGH-------AEFVLWGPLEQVDIRD 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R ++ P ++++F+A ++V S+ F N+ G+F L+ S + + Sbjct: 65 HTNLRMVFAKYNPISVMHFSALTNVRESVENPSLFYEINVTGSFNLIA------SAIEAN 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K RF+ ST YG + +E+ P +PY TK + +L G+ + Sbjct: 119 VK---RFIFSSTCATYGIPKNAILTENDPQKAITPYGYTKYVVERELLNHNKVNGLRSVA 175 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWLY 225 + N G +H PE +IPLAI + F ++G DG +RD+++ Sbjct: 176 LRYFNAAGATFDNVIGEWHDPETHIIPLAIKTALGYQDRFEVFGQDYATIDGTCLRDYVH 235 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV AL +L G NI N N V EI + I + Y T I Sbjct: 236 VLDLANAHVMALEYLLNGGD-----NIAINLGTGNGSTVKEI----LSTIRRIYGCTFPI 286 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + R G D+ K K+ +GW P+ + + W+L N Sbjct: 287 SYAPRRVGDPPALVADNKKAKNVLGWSPKYTLNDIIKSAWNWHLKN 332 >gi|288925273|ref|ZP_06419208.1| epimerase/dehydratase [Prevotella buccae D17] gi|288338038|gb|EFC76389.1| epimerase/dehydratase [Prevotella buccae D17] Length = 346 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 38/263 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ------SNLFSFLQ 56 ++V G G +G L L++ I+ V +A N+ + + F FL Sbjct: 26 ILVAGATGLLGGCLVDALMSLPGIRCRV-----FAAGRNADRARCRFSAYWDDERFEFLV 80 Query: 57 VDICDRECIRSALKEFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+C EF D I+N A+++ E + N+ G L++ R Sbjct: 81 LDVC-------YPLEFNIDFHYIINAASDAAPGAFAKTPVEVVKANVFGVCNLVDYGR-- 131 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPY----NPSSPYSATKASSDYLVL 169 RFL IST E+YG F E D Y P + Y ++K +++ L + Sbjct: 132 -------THRMRRFLYISTGEIYGEGSGTPFRETDSGYVDCATPRACYPSSKRAAETLCV 184 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 ++G YG+ +++ + YGP HF E ++ I ++ G + + DG R W YV Sbjct: 185 SYGAEYGVDTVIARLCHTYGP-HFTESDNRVYAQFIRNVLRGEDILMKSDGSQYRSWCYV 243 Query: 227 EDHVRALYLVLKKGRIGERYNIG 249 D VRAL +L KG G YN+ Sbjct: 244 VDAVRALLFILMKGESGNAYNVA 266 >gi|257884317|ref|ZP_05663970.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|293567428|ref|ZP_06678775.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|294620737|ref|ZP_06699944.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] gi|257820155|gb|EEV47303.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|291589825|gb|EFF21626.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|291599717|gb|EFF30727.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] Length = 329 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +ED P NP +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G + + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSSKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREVLGWKPE 305 >gi|260777670|ref|ZP_05886563.1| UDP-glucose 4-epimerase [Vibrio coralliilyticus ATCC BAA-450] gi|260605683|gb|EEX31968.1| UDP-glucose 4-epimerase [Vibrio coralliilyticus ATCC BAA-450] Length = 338 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 154/355 (43%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVD 58 M ++VTGG G+IGS C ++ + + ++ D L Y + LK + Q SF++ D Sbjct: 1 MNVLVTGGMGYIGSHTCIQMI-EAGMTPVIFDNL-YNSKKSVLKRVEQVTGVALSFIEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D++ + + +K Q +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKQALVAVMKAHQINAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + S+ VYG +ED P + ++PY + KA+ D+ Sbjct: 113 ---EVGVKSIVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSH--VFLYG------D 216 V Y PV S+ S + G P P L+P ++++ G + ++G D Sbjct: 170 SVTLL--RYFNPV-GSHPSGHLGEDPQGIPNNLMPF-VSQVAVGRRECLSVFGDDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D HV AL V +K + YN+G N +D+V +P Sbjct: 226 GTGVRDYIHVMDLADGHVAALKKVGQKEGL-HVYNLGTGNGYSVLDMVKAFELASGKQVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D SK ++ W +E T W +N Sbjct: 285 --------YQIVERRPGDIAECWADPSKAMRDLEWKADRTLEEMTTDTWRWQSNN 331 >gi|255008591|ref|ZP_05280717.1| putative GDP mannose 4,6-dehydratase [Bacteroides fragilis 3_1_12] gi|313146322|ref|ZP_07808515.1| GDP-mannose 4,6-dehydratase [Bacteroides fragilis 3_1_12] gi|313135089|gb|EFR52449.1| GDP-mannose 4,6-dehydratase [Bacteroides fragilis 3_1_12] Length = 357 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + + Sbjct: 52 VRDMKQKRTVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAL 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +K Q R Q ST E+YG + + SE P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEK--QTRIYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 RDW Y +D+V ++L+L+ Sbjct: 225 DAKRDWGYAKDYVECMWLILQ 245 >gi|126464430|ref|YP_001045543.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|126106241|gb|ABN78771.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC 17029] Length = 343 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 139/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GF+GS LC L+ D +V+ +D G+ ++ + F ++ D+ Sbjct: 6 RILVTGGLGFLGSFLCESLLADGH-EVICVDSFQ-TGSRENVAHLRDHPNFEIMRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + + T+++G LL+ R Sbjct: 62 -----TVPLHVEADEIFNLACPASPIHYQVDPVKTVKTSVMGAINLLDLAR--------- 107 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + Q ST EVYG +G + P P S Y K ++ L + YG Sbjct: 108 -RTKSKIFQASTSEVYGDPKVHPQPEGYWGHVNPNGPRSCYDEGKRCAETLFFDYHRQYG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + + G + +YGDG R + YV D +R Sbjct: 167 VNIRIARIFNTYGPRMHPNDGRVVSNFIVQALSGKPITIYGDGTQTRSFCYVTDLIRGFR 226 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ I N+G E + E+ L+ L S S + +D P + Sbjct: 227 ALMDAPDGIELPVNLGNPGEF----TMLELATLVIELT-GSRSKVVHLPLPKDDPTQRKP 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ +GW P+ + GL +T+ + Sbjct: 282 ---DITRATETLGWKPEIPLFDGLQRTIAHF 309 >gi|315503908|ref|YP_004082795.1| nad-dependent epimerase/dehydratase [Micromonospora sp. L5] gi|315410527|gb|ADU08644.1| NAD-dependent epimerase/dehydratase [Micromonospora sp. L5] Length = 313 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 138/321 (42%), Gaps = 33/321 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGG GF+G A+ R L+ +V V+ + GN +++ + DI Sbjct: 1 MHVLVTGGLGFLGRAVARDLLAAGH-RVTVMSR--GHGNRKPSADVA------IVTGDIR 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + +KE + +V+ AA + S + N GT LL + Sbjct: 52 DRARVAQIVKEGGYEGVVHLAALTSGRDSFADPLSYFDVNETGTLNLLMALDTV-----R 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + ST+ VYGS +G SED+P +P SPY+A+K +++++V A+ T I + Sbjct: 107 TTTDPVALVFTSTNIVYGSQHQGALSEDLPPHPESPYAASKVAAEHMVAAYAATGAIGAI 166 Query: 181 LSNCSNNYGPYHFP-----EKLIPLAITRMIEGS--HVFLYGDGQNVRDWLYVEDHVRAL 233 N G ++IP + R I G HV L GDG VRD+++V D A+ Sbjct: 167 TVRPFNIAGAVDGVTDTDRARIIP-NVFRAISGQLDHVTLNGDGSAVRDFVHVADVATAI 225 Query: 234 YLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L G N+G +V A + H+ + + +P Sbjct: 226 RQGLAACSPGVCPTINLGSGTGTSMAAVV--------ATAEQITGHSVTVHRQQPKPEPP 277 Query: 292 RRYAIDSSKIKSEIGWFPQEN 312 A D S+ ++ +GW P + Sbjct: 278 NLIA-DISRAQALLGWTPARS 297 >gi|118474945|ref|YP_892537.1| WbnF [Campylobacter fetus subsp. fetus 82-40] gi|118414171|gb|ABK82591.1| WbnF [Campylobacter fetus subsp. fetus 82-40] Length = 352 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 56/364 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVN--DLKIQVLVID-----KLTYAGNLNSL---KEISQSN 50 M+++VTG AGFIG L R L D + I+ L YA LN L +E + N Sbjct: 1 MKILVTGTAGFIGFHLSRELAKRGDEVVGFDCINDYYDINLKYA-RLNELGIKRENIEEN 59 Query: 51 L---------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + SF++ D+ D + ++ + D IVN AA++ V S++ +I +NI Sbjct: 60 IAVRSSIYPNLSFIKADLSDLKTMQKLFENGSFDCIVNLAAQAGVRYSLINPHAYINSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSAT 160 +G +LE C + K+ + S+ VYG +K FS N P S Y+A+ Sbjct: 120 LGFTNILE------CCRNYGVKN---LVYASSSSVYGLNEKMPFSTHESVNHPISLYAAS 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNV 220 K S++ + + H +G+ YG + P+ + L +EG + +Y G+ Sbjct: 171 KKSNELMAHTYSHLFGLSTTGLRFFTVYGEWGRPDMALFLFTKAALEGKAIDVYNYGKMK 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIG------------------ERYNIGGNNERKNIDIVFE 262 RD+ YV D V+ + + I + YNIG N+ + +D + Sbjct: 231 RDFTYVADIVKGVMKCVDNPAIANLAWDASHPDPATSNAPYKIYNIGNNSPVELMDYIKA 290 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 I L I K+ + + G D S + + + P ++ G+ + V Sbjct: 291 IEIKLGREIKKN--------LMPLQAGDVPSTYADVSDLVEDFNYKPNTSVNDGVARFVQ 342 Query: 323 WYLD 326 WY+D Sbjct: 343 WYMD 346 >gi|53713112|ref|YP_099104.1| GDP-mannose 4,6-dehydratase [Bacteroides fragilis YCH46] gi|60681378|ref|YP_211522.1| putative GDP mannose 4,6-dehydratase [Bacteroides fragilis NCTC 9343] gi|253566783|ref|ZP_04844235.1| gmd [Bacteroides sp. 3_2_5] gi|265763204|ref|ZP_06091772.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_16] gi|18152900|gb|AAL61891.1| Gmd [Bacteroides fragilis] gi|52215977|dbj|BAD48570.1| GDP-mannose 4,6-dehydratase [Bacteroides fragilis YCH46] gi|60492812|emb|CAH07586.1| putative GDP mannose 4,6-dehydratase [Bacteroides fragilis NCTC 9343] gi|251944346|gb|EES84835.1| gmd [Bacteroides sp. 3_2_5] gi|263255812|gb|EEZ27158.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_16] gi|301162834|emb|CBW22381.1| putative GDP mannose 4,6-dehydratase [Bacteroides fragilis 638R] Length = 357 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + + Sbjct: 52 VRDMKQKRTVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAL 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +K Q R Q ST E+YG + + SE P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEK--QTRIYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 RDW Y +D+V ++L+L+ Sbjct: 225 DAKRDWGYAKDYVECMWLILQ 245 >gi|221369987|ref|YP_002521083.1| NAD-dependent epimerase/dehydratase precursor [Rhodobacter sphaeroides KD131] gi|221163039|gb|ACM04010.1| NAD-dependent epimerase/dehydratase precursor [Rhodobacter sphaeroides KD131] Length = 343 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 139/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GF+GS LC L+ D +V+ +D G+ ++ + F ++ D+ Sbjct: 6 RILVTGGLGFLGSFLCESLLADGH-EVICVDSFQ-TGSRENVAHLRDHPNFEIMRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + + T+++G LL+ R Sbjct: 62 -----TVPLHVEADEIFNLACPASPIHYQVDPVKTVKTSVMGAINLLDLAR--------- 107 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + + Q ST EVYG +G + P P S Y K ++ L + YG Sbjct: 108 -RTKSKIFQASTSEVYGDPKVHPQPEGYWGHVNPNGPRSCYDEGKRCAETLFFDYHRQYG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + + G + +YGDG R + YV D +R Sbjct: 167 VNIRIARIFNTYGPRMHPNDGRVVSNFIVQALSGKPITIYGDGTQTRSFCYVTDLIRGFR 226 Query: 235 LVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ I N+G E + E+ L+ L S S + +D P + Sbjct: 227 ALMDAPDGIELPVNLGNPGEF----TMLELATLVIELT-GSRSKVVHLPLPKDDPTQRKP 281 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ +GW P+ + GL +T+ + Sbjct: 282 ---DITRATETLGWKPEIPLFDGLQRTIAHF 309 >gi|315167711|gb|EFU11728.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1341] Length = 310 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|269837153|ref|YP_003319381.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] gi|269786416|gb|ACZ38559.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] Length = 315 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 47/336 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGG+GF+G L +L + +++ + A L ++ + D+ Sbjct: 1 MRALITGGSGFVGRHLAAHLRAETDWEIVALG----ARRAPVLPGVTGAA------CDLS 50 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L+ + PD + + AA + V + + + N I L E L Sbjct: 51 DRAAVDAVLRRYPPDIVFHLAARTSVPEAFVEPGATLINNAIAQINLFESIH----ALGL 106 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D L + EVYG + E P+ P++PY+ +K D L + +G ++ + Sbjct: 107 DPV----ILVAGSSEVYGPAPPEAMPLDERQPFLPANPYAVSKVVQDMLAVQYGLSHQMR 162 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH------VFLYGDGQNVRDWLYVEDHVRA 232 ++ N+ GP E+ + + R I + V G+ RD+L V D VRA Sbjct: 163 IVRVRPFNHIGPGQS-ERFVVASFARQIAAAEQGLIEPVVRVGNLDAQRDFLDVRDVVRA 221 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LV + GE +N+ R I +LD L+ + R IE RP R Sbjct: 222 YRLVAQPELAGEVFNVASGVPRS-------IRQVLDRLLALAR------RPIEVRPDPAR 268 Query: 293 RYAID-------SSKIKSEIGWFPQENMESGLNKTV 321 D S+K++ GW P+ E L T+ Sbjct: 269 LRPSDAPVVYGSSAKLQQSTGWEPEIPFEQSLIDTL 304 >gi|172058577|ref|YP_001815037.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sibiricum 255-15] gi|171991098|gb|ACB62020.1| NAD-dependent epimerase/dehydratase [Exiguobacterium sibiricum 255-15] Length = 345 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 46/347 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEIS-QSNLFSFLQVDI 59 +++TG AGFIG R + + +V+ +D++ Y L + + N ++F +V + Sbjct: 6 ILITGIAGFIGFHAARRFMAE-GYRVIGLDEVNDYYDPTLKEARLMELDPNRYTFYRVSL 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I + Q D +++ AA++ V SI D +IT+NI+G +LE +C Sbjct: 65 EDATAINRIFETEQIDLVLHLAAQAGVRYSIDRPDVYITSNIVGFLSILE------ACRH 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + S+ VYGS K F + D +P S Y+A+K +++ + + YGI Sbjct: 119 HPVE---QLIYASSSSVYGSNTKMPFATTDAVDHPLSLYAASKKANELMAHTYSSLYGIK 175 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 + YGP+ P+ + + G + LY G+ RD+ YV+D + ++Y +++ Sbjct: 176 TTGLRFFSVYGPWGRPDMALFKFTEAIANGQPIDLYNYGEMGRDFTYVDDIIESIYRLMQ 235 Query: 239 KGRIGERYNIGGN--NERKNIDI-VFEIGFLLDALIPKSYSHT-----ELIRFIEDRPG- 289 + N +R N+ VF IG SH+ E + IE+R G Sbjct: 236 TEPAADPAFDQENPLPDRSNVPYRVFNIG-----------SHSPIRLNEFVSLIEERLGK 284 Query: 290 ----HDRRYA--------IDSSKIKSEIGWFPQENMESGLNKTVCWY 324 H+ D + IG+ PQ +E+G++ + WY Sbjct: 285 KAIKHEMPLQAGDVPESFADVESLFETIGYRPQTTIEAGVHAFIDWY 331 >gi|153834367|ref|ZP_01987034.1| GDP-mannose 4,6-dehydratase [Vibrio harveyi HY01] gi|148869292|gb|EDL68310.1| GDP-mannose 4,6-dehydratase [Vibrio harveyi HY01] Length = 370 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 40/341 (11%) Query: 5 VTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DIC 60 +TG G GS L L+ ++ L+ +Y N + E+ SN S +Q+ D+ Sbjct: 8 ITGITGQDGSYLAELLIEKGYEVHGLIRRASSY--NTERVDELCNSN--SNIQLHYGDLT 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +KE QPD + N A SHV S + + +GT LLE R+ Sbjct: 64 DSSNLIRLIKEIQPDEVYNLGAMSHVAVSFESPEYAADVDAMGTIRLLEAIRI------N 117 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 +++ RF Q ST E+YG + + E P++P SPY+ K + ++ + + +YG+ Sbjct: 118 GLENKTRFYQASTSELYGEVQEIPQRETTPFHPRSPYAVAKMYAYWITVNYRESYGMYAC 177 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALYLV 236 N+ P F + I AI + +G V G+ +RDW + +D+VR +++ Sbjct: 178 NGILFNHESPRRGETFVTRKITRAIANISQGLESVLELGNMDALRDWGHAKDYVRMQWMM 237 Query: 237 LKK-----------GRIGERYNIGGNNERKNIDIVF------EIGFL--LDALIPKSYSH 277 L++ +I R + + + IDI F EI + +D+ + Sbjct: 238 LQQDVADDFVIATGKQISVREFVRMSAKEAGIDIEFSGEGVNEIATVSQVDSNKAPGVTV 297 Query: 278 TELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMES 315 ++I + RP D +K K ++GW P+ +E+ Sbjct: 298 GDVIVRVNPKFYRPAEVETLLGDPTKAKEKLGWVPEITVEA 338 >gi|126440560|ref|YP_001060255.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia pseudomallei 668] gi|126220053|gb|ABN83559.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei 668] Length = 337 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 36/333 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVI----DKLTYAGNLNSLKEISQSNLFSFLQV 57 R+++TG G +GS L +L+ + ++ + L +L L I++ N + Sbjct: 4 RVLITGITGMVGSHLADFLLENTDWEIYGLCRWRSPLDNVSHL--LPRINEKNRIRLVYG 61 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I A+K+ PD + + AA+S+ S + + TN+ GT +LE Sbjct: 62 DLRDYLSIHEAVKQSTPDFVFHLAAQSYPKTSFDSPLDTLETNVQGTANVLE-------A 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L ++ D + S+ EV+G + +K E+ ++P+SPY+ +K +D + + Y Sbjct: 115 LRKNNIDAVTHVCASS-EVFGRVPREKLPIDEECTFHPASPYAISKVGTDLIGRYYAEAY 173 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGS---HVFLYGDGQNVRDWLYVEDH 229 + V+ + + GP F E I MIE V G+ ++R + V D Sbjct: 174 NMTVMTTRMFTHTGPRRGDVFAESTFAKQIA-MIERELIPPVVKTGNLDSLRTFADVRDA 232 Query: 230 VRALYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-- 286 VRA Y+++ I G YNIGG +G +LD LI S S ++IR D Sbjct: 233 VRAYYMLVTINPIPGAYYNIGGTYS-------CTVGQMLDTLISMSTSK-DVIRVETDPE 284 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 RP ++ K ++ GW P+ + E + Sbjct: 285 RLRPIDADLQVPNTRKFEAVTGWKPEISFEKTM 317 >gi|293570640|ref|ZP_06681691.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] gi|291609311|gb|EFF38582.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] Length = 329 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +E+ P NP +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G N + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSNKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREILGWKPE 305 >gi|254780328|ref|YP_003064741.1| UDP-glucose 4-epimerase [Candidatus Liberibacter asiaticus str. psy62] gi|254040005|gb|ACT56801.1| UDP-glucose 4-epimerase [Candidatus Liberibacter asiaticus str. psy62] Length = 333 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 48/344 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDICD 61 ++V GGAG+IG+ CR L + +V+D L+ +G+ ++ L+ L QVDICD Sbjct: 6 VLVVGGAGYIGAHTCRVLY-ERGFLPIVLDNLS-SGH-------AEFVLWGPLEQVDICD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +R+ ++QP ++++FA +++ S+ F NI G+F L+ + Sbjct: 57 YTNLRAVFAKYQPASVMHFAGLTNISESVKNPSLFYEINIKGSFNLIA---------TAI 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + RF+ ST YG + +E+ P +PY TK + +L G+ ++ Sbjct: 108 ESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNGLRSVV 167 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWLY 225 + + G +H PE +IPLAI + + F ++G DG +RD+++ Sbjct: 168 LRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIH 227 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D H+ AL ++ +G N+G +I+ I + + P +Y Sbjct: 228 VLDLANAHIMALEYLINQGD-SIAINLGTGTGITVKEIISTIQSMYECAFPITYES---- 282 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R I D P D+ K K +GW P+ + + W+L Sbjct: 283 RRIGDPPS----LVADNKKAKKILGWNPKYKLRDIIESAWNWHL 322 >gi|302848856|ref|XP_002955959.1| hypothetical protein VOLCADRAFT_66420 [Volvox carteri f. nagariensis] gi|300258685|gb|EFJ42919.1| hypothetical protein VOLCADRAFT_66420 [Volvox carteri f. nagariensis] Length = 328 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 35/327 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC YLV + V+ +D + G+ ++ + F ++ D+ Sbjct: 20 RVLVTGGAGFVGSHLCDYLV-ERGDHVICLDNF-FTGSKENIAHLLGKPNFEVIRHDV-- 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E D + + A + + T+ +GT + L Sbjct: 76 ---VEPILLEV--DQVFHCACPASPIHYKYNPIKTAKTSFLGTM----------NMLGLA 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + RFL ST EVYG + E P S Y K ++ L + + +G Sbjct: 121 KRCKARFLITSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRVAETLAMDYYREHG 180 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP + +++ +++ + + +YGDGQ R + YV D VR L Sbjct: 181 LQVRIVRIFNTYGPRMALDDGRVVSNFVSQALTNKPITVYGDGQQTRSFQYVSDLVRGLV 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+ IG +NIG E ++ L L+ + + +I + E+ R Sbjct: 241 AVMDGPHIGP-FNIGNPGEFTMLE--------LANLVKEVVNPNAVIEYRENTADDPSRR 291 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K +GW P+ + GL + V Sbjct: 292 RPDITKATEMLGWKPEVPLREGLLRMV 318 >gi|218438822|ref|YP_002377151.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] gi|218171550|gb|ACK70283.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424] Length = 309 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 140/328 (42%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ +VL +D N LK + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLMEQGH-EVLCLDNFYTGHKRNILKWLDHP-YFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D + + A + + I TN++GT + L Sbjct: 59 --EPIR-----LEVDQVYHLACPASPVHYQFNPVKTIKTNVLGTLYM----------LGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----SPYSATKASSDYLVLAWGHTY 175 K+ Q RFL ST EVYG D E+ N + + Y K ++ L + + Sbjct: 102 AKRVQARFLLASTSEVYGDPDVHPQPEEYRGNVNCTGLRACYDEGKRVAETLAFEYYREH 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + ++ N YGP +++ I + ++G + +YGDG R + YV D V L Sbjct: 162 KVDIRVARIFNTYGPRMLENDGRVVSNFIVQALKGEPLTVYGDGSQTRSFCYVSDLVDGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ IG NIG E +++ +I +++ Y ED P ++ Sbjct: 222 MRLMNGEYIGP-INIGNPGEYTILELAQKIQNMINPDAELVYK-----PLPEDDP---KQ 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K K+ +GW P + GL T+ Sbjct: 273 RQPDITKAKTWLGWQPTVPLNEGLKLTI 300 >gi|315026928|gb|EFT38860.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2137] Length = 310 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|315607296|ref|ZP_07882296.1| nucleotide-sugar dehydratase [Prevotella buccae ATCC 33574] gi|315250999|gb|EFU30988.1| nucleotide-sugar dehydratase [Prevotella buccae ATCC 33574] Length = 346 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 38/263 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL------FSFLQ 56 ++V G G +G L L++ I+ V +A N+ + + + F FL Sbjct: 26 ILVAGATGLLGGCLVDALMSLPGIRCRV-----FAAGRNADRARCRFSAYWDDERFEFLV 80 Query: 57 VDICDRECIRSALKEFQPD--AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 +D+C EF D I+N A+++ E + N+ G L++ R Sbjct: 81 LDVC-------YPLEFNIDFHYIINAASDAAPGAFAKTPVEVVKANVFGVCNLVDYGR-- 131 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPY----NPSSPYSATKASSDYLVL 169 RFL IST E+YG F E D Y P + Y ++K +++ L + Sbjct: 132 -------THRMRRFLYISTGEIYGEGSGTPFRETDSGYVDCATPRACYPSSKRAAETLCV 184 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 ++G YG+ +++ + YGP HF E ++ I ++ G + + DG R W YV Sbjct: 185 SYGAEYGVDTVIARLCHTYGP-HFTESDNRVYAQFIRNVLHGEDILMKSDGSQYRSWCYV 243 Query: 227 EDHVRALYLVLKKGRIGERYNIG 249 D VRAL +L KG G YN+ Sbjct: 244 VDAVRALLFILMKGESGNAYNVA 266 >gi|298387640|ref|ZP_06997191.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] gi|298259496|gb|EFI02369.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] Length = 356 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKG-------RIGERYNI------------------GGNN 252 RDW Y +D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID+ G +L + PK + RP + D +K ++ +GW P++ Sbjct: 285 DEKGIDVA--TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKARTLLGWNPRKT 331 >gi|116071583|ref|ZP_01468851.1| putative nucleotide sugar epimerase [Synechococcus sp. BL107] gi|116065206|gb|EAU70964.1| putative nucleotide sugar epimerase [Synechococcus sp. BL107] Length = 340 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 48/350 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL-TY------AGNLNSLKEISQSNLFSFL 55 ++VTG AGFIG+AL + L+ +V+ +D L TY L ++ ++Q + F Sbjct: 5 VLVTGAAGFIGAALSQRLLQQGD-RVVGVDNLNTYYDPALKQARLRQIEAVAQEGNWRFE 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 + + D E + QP +VN AA++ V S+ +I +N++G +LE R Sbjct: 64 PLALEDGEALMELFSAEQPQVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCR--- 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHT 174 + S+ VYG F E P N P S Y+A+K +++ + + H Sbjct: 121 ------HHGVGNLVYASSSSVYGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHL 174 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRAL 233 YG+ YGP+ P+ + P+ R I G + ++ G+ RD+ Y++D V + Sbjct: 175 YGLSATGLRFFTVYGPWGRPD-MAPMLFARAILAGEPIKVFNHGKMQRDFTYIDDIVEGV 233 Query: 234 YLVL-KKGRIGERYNIGGNNERKNIDI--VFEIGFLLDALIPKSYSHTELIRFIED---- 286 K ++ + VF IG + TEL+RFIE Sbjct: 234 MRCCDKPATTNPDFDPLQPDPATAAAPHRVFNIG---------NSQPTELLRFIEVMEQA 284 Query: 287 ---------RP---GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +P G A ++S ++ +G+ P +E G+++ WY Sbjct: 285 LGCEAIKNFQPMQLGDVVATAANTSALEDWVGFRPSMPIEVGVDRFAQWY 334 >gi|148264642|ref|YP_001231348.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146398142|gb|ABQ26775.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 358 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 41/347 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M++++TG AGFIG + L+ + +++ ID L Y L L+ + Q F++ Sbjct: 24 MKILITGIAGFIGMHVALRLL-ERGDEIVGIDNLNDYYDVGLKRARLEHLKQYGSVRFVE 82 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D + + +V+ AA++ V S+ +I +NI+G +LE R Sbjct: 83 MDLADAPRLAELFAAEKFRRVVHLAAQAGVRYSLQNPRAYIDSNIVGFLNVLEGCR---- 138 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG+ + FS + P S Y+ATK +++ + + H Y Sbjct: 139 -----HHPVEHLVYASSSSVYGANTRMPFSVHHNVDHPVSLYAATKKANELMAHTYSHLY 193 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 GIP YGP+ P+ ++I G + ++ +G +RD+ Y++D V + Sbjct: 194 GIPTTGLRFFTVYGPWGRPDMAYFSFTQKIIAGKAINVFNNGNMLRDFTYIDDIVEGVVR 253 Query: 236 VLKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VL + G + YNIG N+ E+G ++ L + Sbjct: 254 VLDRFPSPNPSWSGDSPDPASSQAPYLIYNIGNNSP-------VELGVFIEVL-EECLGQ 305 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + ++ +PG D + +++G+ P ++ G+ K V WY Sbjct: 306 KAVKNYLPMQPGDVPATYADVDDLITDVGFAPVTAIKEGIGKFVDWY 352 >gi|302340731|ref|YP_003805937.1| GDP-mannose 4,6-dehydratase [Spirochaeta smaragdinae DSM 11293] gi|301637916|gb|ADK83343.1| GDP-mannose 4,6-dehydratase [Spirochaeta smaragdinae DSM 11293] Length = 361 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 150/348 (43%), Gaps = 56/348 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL----KEISQSNLFSFLQV 57 + ++TG G GS L +L+ D +V I + + N + + K++ + + L Sbjct: 3 KALITGITGQDGSYLAEFLL-DKGYEVHGIKRRASSFNTDRVDHLYKDLHEHEVRFILHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N A SHV S + + IGT LLE R+ Sbjct: 62 GDLTDTGNLIRIVQEIQPDEIYNLGAMSHVKVSFESPEYTADADGIGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+A K S ++ + + YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQEVPQKETTPFYPRSPYAAAKLYSYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I A R+ +G LY G+ RDW Y D+V Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRAAARISQGLQQKLYLGNLDAKRDWGYAGDYVEL 235 Query: 233 LYLVLKK--------------------------GRIGERYNIGGNNERKNIDIVFEIGFL 266 ++L+L++ I R+ G +E K ID G + Sbjct: 236 MWLMLQQEEPDDFVMATGVTTAVRDFVKMAFAEAGIKLRFEGSGVDE-KGIDAAS--GNV 292 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + + P+ + TE+ I D PG K K ++GW P+ +++ Sbjct: 293 IVEVDPRYFRPTEVELLIGD-PG----------KAKEKLGWIPKVDLQ 329 >gi|319947245|ref|ZP_08021478.1| UDP-glucose 4-epimerase [Streptococcus australis ATCC 700641] gi|319746487|gb|EFV98747.1| UDP-glucose 4-epimerase [Streptococcus australis ATCC 700641] Length = 332 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 50/348 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LVN+ + +V+V+D L G+ ++ + F D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLV-TGHRAAVHPDA-----VFYHGDLA 54 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWS 116 D++ +R KE DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRRVFKEHADIDAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYI 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S ST YG ++ E P P +PY +K + ++ YG Sbjct: 115 VFS------------STAATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYG 162 Query: 177 I---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNV 220 I P+ N + + G H PE + + ++ +G + ++G DG NV Sbjct: 163 IKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKISIFGDDYQTPDGTNV 222 Query: 221 RDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++ D A L L+ G +N+G + N+ IV K H Sbjct: 223 RDYVHPFDLADAHLLAVEYLRNGNPSTAFNLGSSTGFSNLQIV--------EAARKVTGH 274 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 275 PIPLEIADRRPGDPDTLIASSEKARAILGWQPKFDNIETIIQTAWEWH 322 >gi|300869502|ref|ZP_07114084.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Oscillatoria sp. PCC 6506] gi|300332475|emb|CBN59282.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Oscillatoria sp. PCC 6506] Length = 355 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 59/360 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TGG+GF+GS+L L Q+ +D L G+ +L + Q+ + F+ DI Sbjct: 4 RVLITGGSGFVGSSLGLGLAQRYPDWQITALDNLKRRGSELNLPRLKQAGI-KFVHGDIR 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E + A+ QPD I+ +AE V + TN++GT +CL Sbjct: 63 NTEDLDPAV--LQPDLILECSAEPSVLAGYAAPGYVLQTNLVGTI----------NCLEL 110 Query: 121 DKKDQFRFLQISTDEVY--------------------------GSLDKGLFSEDMPYNPS 154 ++ Q F+ +ST VY G+ G+ SE+ P + + Sbjct: 111 ARQTQADFIFLSTSRVYPIAYLNAMEFTEAETRFHLTEKQSLSGASSHGI-SEEFPLDKA 169 Query: 155 -SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 S Y ATK +S+ L+ + YG+ +++ C GP+ + + I + H F Sbjct: 170 RSLYGATKLASELLITEYADAYGLRTVINRCGVLTGPWQMGK--VDQGIFALWMAFHYFQ 227 Query: 214 Y--------GDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEI 263 G G+ VRD+L++ D + + L + + GE +N+GG N ++E Sbjct: 228 KPLKYIGYGGTGKQVRDFLHIADLLDLIDLQIYNLEALKGEIFNVGGG--INNTLSLYET 285 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L + + + +E+R G + DS K+ + GW P+ + + L + W Sbjct: 286 TQLCQEI---TGHKVPIDPIVENRIGDVPIFITDSRKVITATGWQPKRDAKMTLTEIYEW 342 >gi|91200270|emb|CAJ73315.1| similar to uridine 5'-diphospho-glucose 4-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 320 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 30/327 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAGFIGS L L+ D +V +D L Y G ++K + F+F + D+ + Sbjct: 7 ILITGGAGFIGSHLIDLLL-DKDFKVTCVDNL-YLGRKENIKHQLHNENFAFYKFDVLNF 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++ + DAI + A S + +S D + N + T+ +LE RL + Sbjct: 65 KKLNDIFRKERFDAIFHLVANSDIKQSAAQTDLDLKLNFMSTYNVLEAMRL-------NN 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 +Q F ST ++G D+ + +EDM P P S Y A+K +++ + A+ H +G L Sbjct: 118 VNQIVF--ASTSAIFGETDE-VITEDMGPLIPISFYGASKLAAEAYISAYVHNFGTRAWL 174 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLKKG 240 N G L L + ++ E + + G+G+ + +LYV++ V L V + Sbjct: 175 IRFPNVVGERATHGILFDL-MNKLKENQNTLNVLGNGKQEKPYLYVKELVEGLIYVWQNA 233 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 E YN I + + L+D L K + + G DR + D K Sbjct: 234 N--ENYNYFNLGSDSTIKVSGIVEILIDELNLKGRTQIKY-------SGGDRGWVGDVPK 284 Query: 301 IK------SEIGWFPQENMESGLNKTV 321 K +++GW N E + TV Sbjct: 285 FKYSLNKANKLGWKANLNSEQAIRLTV 311 >gi|87310749|ref|ZP_01092876.1| dTDP-glucose 4-6-dehydratase [Blastopirellula marina DSM 3645] gi|87286506|gb|EAQ78413.1| dTDP-glucose 4-6-dehydratase [Blastopirellula marina DSM 3645] Length = 335 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + V+ +D + N ++ + N F F++ DI Sbjct: 16 RILVTGGAGFLGSHLCERLV-EAGHDVICLDNFFTSQKSNIVRLLDFHN-FEFIRHDI-- 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 72 -----TMPVWLEVDEIYNLACPAAPGHYQYNPIKTTKTSVMGAI----------NVLGMA 116 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + E P P + Y K ++ L + + + Sbjct: 117 KRCRARVLQASTSEVYGDPEIHPQPESYRGNVNPIGPRACYDEGKRVAETLFMDYHRSNR 176 Query: 177 IPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + I + LYGDG R + Y +D V A+ Sbjct: 177 VAIKIVRIFNTYGPRMHPYDGRVVSNFIRQAINNEPITLYGDGSQTRSFCYRDDLVEAMI 236 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR--FIEDRPGHD 291 ++ G NIG +E F I L + ++ + S ++ + ED P Sbjct: 237 RMMNCDGSFIGPVNIGNPHE-------FTIRQLAELVVKYTGSKSKFVHKPLPEDDP--- 286 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + K ++ W P+ +E+GL T+ W+ Sbjct: 287 LQRQPDIALAKEKLDWEPKVELEAGLKATIEWF 319 >gi|52082093|ref|YP_080884.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787483|ref|YP_093312.1| hypothetical protein BLi03803 [Bacillus licheniformis ATCC 14580] gi|319647961|ref|ZP_08002179.1| hypothetical protein HMPREF1012_03218 [Bacillus sp. BT1B_CT2] gi|52005304|gb|AAU25246.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52349985|gb|AAU42619.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317390302|gb|EFV71111.1| hypothetical protein HMPREF1012_03218 [Bacillus sp. BT1B_CT2] Length = 309 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 36/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 +++VTGG GFIGS + L+ + +V ++D LT + N++ L F + DI Sbjct: 3 KVLVTGGCGFIGSHIAEQLLKE-NYRVSILDNLTTGHRSNIDGLP-------IDFYEQDI 54 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E I +K PD IV+ AA+ V S+ +F+ I L + C Sbjct: 55 TKPEVI-DVIKSIDPDYIVHLAAQVSVAESV---SDFLNDENINIRGSLHIIKAAGEC-- 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKAS-SDYLVLAWGHTYGIP 178 + + + S+ VYG+ D NP SPY TK + +YL LA+ YG Sbjct: 109 ----NVKKIVFASSAAVYGNPDYLPVDTRHQTNPGSPYGLTKLTVENYLKLAY-DLYGTE 163 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + SN YGP + ++ + + G ++GDG+ RD++YV D A Sbjct: 164 YCILRYSNVYGPRQDAKGEGGVVSIFSDLLTSGKAPVIFGDGEQSRDFIYVGDVACANVK 223 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDRRY 294 LK +N N+ F I K +++EL +D RPG R Sbjct: 224 ALK----------AQSNVCLNVSNGFSITVNELFTEMKKATNSELSPIYQDERPGDIRHS 273 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + + K + W P+ + GL KT+ +Y Sbjct: 274 TLCNEETKKILNWEPKMPLAEGLEKTISYY 303 >gi|257416950|ref|ZP_05593944.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257158778|gb|EEU88738.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 330 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ ++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRAAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|239945630|ref|ZP_04697567.1| putative UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] gi|239992100|ref|ZP_04712764.1| putative UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 11379] gi|291449088|ref|ZP_06588478.1| UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] gi|291352035|gb|EFE78939.1| UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] Length = 325 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/336 (24%), Positives = 151/336 (44%), Gaps = 54/336 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R +V + +V+V+D + +G ++ L + + ++ Sbjct: 1 MTWLITGGAGYIGAHVARAMVAAGE-RVVVLDDRS-SGVVDRLP-----DAVTLVEGSAS 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + L +V+ AA+ V S+ + N+ G +LLE + ++ Sbjct: 54 DRALLDRVLAGHAVSGVVHLAAKKQVGESVEKPLLYYRENVAGLAVLLE------AVVAA 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + RFL S+ VYG D L +E+ P P +PY TK + ++LV A G +G L Sbjct: 108 GVR---RFLFSSSAAVYGVPDVDLITEETPCLPINPYGETKLTGEWLVRATGKAHG---L 161 Query: 181 LSNCSN--NYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLY 225 + C N PE ++P+ R+ G ++G DG +RD+++ Sbjct: 162 STACLRYFNVAGAAAPELADTGVFNIVPMMFERLTHGEAPRIFGDDYPTPDGTCIRDYIH 221 Query: 226 VEDHVRALYLVLKK----GRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHT 278 V D A V ++ G N+G G + R+ D++ E+ + + Sbjct: 222 VADLAEAHLAVARRLDETGAGDLTLNVGRGEGVSVRELADVIGEV------------TGS 269 Query: 279 ELIRFIEDRPGHDRRYAIDS-SKIKSEIGWFPQENM 313 +L +E R D A+ S ++I E+GW + ++ Sbjct: 270 DLKPVVEPRRAGDAPKAVASAARITGELGWTARRSV 305 >gi|218245769|ref|YP_002371140.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801] gi|218166247|gb|ACK64984.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801] Length = 321 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 53/340 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IV GGAGFIGS L L+ + I V V D LT +G+ +L+ I+ +Q DI Sbjct: 1 MKAIVIGGAGFIGSHLVEQLL-EKGISVKVYDNLT-SGSSGNLRSIASE--IELIQDDIR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSC 117 + + A+K D + + AA + V +S+ L A E T + LW + Sbjct: 57 HFDGLVKAMKGV--DWVFHLAALTSVAQSVDNPLLAHEINNTGTLNV--------LWAAV 106 Query: 118 LSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S+ R + S+ VYG S + D+P P SPY+A+K +++ ++ YG Sbjct: 107 QSKVS----RVIISSSCAVYGDSHTPPVRETDLPV-PKSPYAASKLTAEAFASSFYAAYG 161 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV----FLYGDGQNVRDWLYVEDHVRA 232 +P L N YG P+ I R IE +YGDG RD+++V D +A Sbjct: 162 LPSLCLRYFNVYGERQRPDSDYAAVIPRFIEAYRTHQTPHIYGDGYQSRDFIHVRDVAKA 221 Query: 233 LYL-------VLKKGRIGERYNIG---GNNERKNIDIVFE-IGFLLDALIPKSYSHTELI 281 +L VL R+ +NIG N R+ +DI+ E +G+ IP Sbjct: 222 NFLAASVEASVLSHYRV---FNIGTGVSTNLRELLDIIAESVGY----EIPP-------- 266 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +F R G + D + ++G+ P +++SGL V Sbjct: 267 QFHSARTGDIQHSCSDITLATKKLGFSPTIDLKSGLKNLV 306 >gi|71899895|ref|ZP_00682043.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Ann-1] gi|71730335|gb|EAO32418.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Ann-1] Length = 323 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 19/236 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG+ +CR L ND V+ +D Y L + + Sbjct: 1 MTVLVTGAAGFIGAHVCRALAARND---TVVGLDNYNAYYDPQLKRDRVTALCPDVHIRT 57 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E QPD +V+ AA++ V SI ++ +N++G +LE R Sbjct: 58 LDLTDRERCAALFNEVQPDQVVHLAAQAGVRYSIENPHAYVDSNLVGFLNVLELCR---H 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C Q + S+ VYG FSE + P S Y ATK +++ + ++ Y Sbjct: 115 CRVQ------HLVYASSSSVYGDSAIPPFSEQQRVDQPRSLYGATKVANEVMAYSYAQLY 168 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHV 230 G+ YGP+ P+ + PL +R ++EG + ++ G+ RD+ ++ D V Sbjct: 169 GLRATGLRFFTVYGPWGRPD-MAPLIFSRAVMEGRPIEVFNHGRMERDFTFINDIV 223 >gi|71274484|ref|ZP_00650772.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Dixon] gi|71898317|ref|ZP_00680490.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Ann-1] gi|170730587|ref|YP_001776020.1| nucleotide sugar epimerase [Xylella fastidiosa M12] gi|71164216|gb|EAO13930.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Dixon] gi|71731840|gb|EAO33898.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Ann-1] gi|167965380|gb|ACA12390.1| nucleotide sugar epimerase [Xylella fastidiosa M12] Length = 323 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 19/236 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG+ +CR L ND V+ +D Y L + + Sbjct: 1 MTVLVTGAAGFIGAHVCRVLAARND---TVVGLDNYNAYYDPQLKRDRVTALCPDVHIRT 57 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E QPD +V+ AA++ V SI ++ +N++G +LE R Sbjct: 58 LDLTDRERCAALFNEVQPDRVVHLAAQAGVRYSIENPHAYVDSNLVGFLNVLELCR---H 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C Q + S+ VYG FSE + P S Y ATK +++ + ++ Y Sbjct: 115 CRVQ------HLVYASSSSVYGDSAIPPFSEQQRVDQPRSLYGATKVANEVMAYSYAQLY 168 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHV 230 G+ YGP+ P+ + PL +R ++EG + ++ G+ RD+ ++ D V Sbjct: 169 GLRATGLRFFTVYGPWGRPD-MAPLIFSRAVLEGRPIEVFNHGRMERDFTFINDIV 223 >gi|217073260|gb|ACJ84989.1| unknown [Medicago truncatula] Length = 369 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 28/325 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK--------EISQSNLFSFL 55 ++TG G GS L +L+N +I + + N N+ + + Sbjct: 27 LITGITGQDGSYLTEFLLNKGHSVHGLIRR---SSNFNTQRIDHIYVNPHTAHKAHMKLH 83 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L PD + N AA+SHV S D G LLE R Sbjct: 84 YADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR--- 140 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S + + R+ Q + E++GS SE P++P SPY+A+K ++ + + + Y Sbjct: 141 SHIDATGRSHIRYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKVAAHWYTVNYREAY 199 Query: 176 GI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDH 229 GI +L ++ S G +F + I A+ R+ G S +FL G+ RDW + D+ Sbjct: 200 GIFACNGILFNHGSPRRGE-NFVTRKITRAVGRIKIGLQSKLFL-GNLSASRDWGFAGDY 257 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V A++L+L++ + + + + ++ E+ F L K + + F RP Sbjct: 258 VEAMWLMLQQEKADDY--VVATEDSHTVEEFLEVAFGYVGLNWKDHVVIDKRYF---RPT 312 Query: 290 HDRRYAIDSSKIKSEIGWFPQENME 314 D+SK K +GW P+ + E Sbjct: 313 EVDNLKGDASKAKKVLGWKPKVSFE 337 >gi|327534703|gb|AEA93537.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 329 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ ++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRAAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|237796159|ref|YP_002863711.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|229263700|gb|ACQ54733.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 354 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/358 (22%), Positives = 152/358 (42%), Gaps = 47/358 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----------YAGNLNSLKEISQ- 48 M ++VTGGAGFIG + + L+ + +V+ +D L+ Y L+ +K + Sbjct: 1 MNILVTGGAGFIGRWVVKILLLEGH-EVVALDNLSNGRLENIYEFVYEDKLDYIKNNKEN 59 Query: 49 -SNL----FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 S+L F F++ DI D + K+ + D + + A +V SI + +G Sbjct: 60 ISDLEGEKFKFIKGDIKDDALLDKLFKKNKFDIVYHLGASINVQESIDDPKTTFYNDTVG 119 Query: 104 TFILLEETRLW------------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY 151 TF +LE+ + W +K + + +ST VY + E+ Sbjct: 120 TFNILEKCKTQMFGKKAKMEGDKWILDKNEKAYPCKVVFMSTCMVYDKAPEVGIDEEHRV 179 Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEG 208 P SPY K +++ +VL++ + Y +P ++ N YGP+ ++ + I +E Sbjct: 180 KPISPYGGAKIAAENMVLSYYNAYKLPTVVIRPFNTYGPFQKTNGEGGVVAIFINNYLEN 239 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI---GF 265 ++ +YG G+ RD LYV+D + K + + G I+ + +I G Sbjct: 240 KNLNIYGTGEQTRDLLYVKDCANFVVEAGYKDSVNGQIVNAGTGRDIAINELAQIISSGK 299 Query: 266 LLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + +P + +E+++ + K K + W P +E G+ +T W Sbjct: 300 VKINHVPHIHPQSEIMKL-----------KCNYKKAKELMRWEPNYTLEEGIEETKQW 346 >gi|75908178|ref|YP_322474.1| UDP-galactose 4-epimerase [Anabaena variabilis ATCC 29413] gi|75701903|gb|ABA21579.1| UDP-galactose 4-epimerase [Anabaena variabilis ATCC 29413] Length = 332 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 49/330 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+++D L Y G+ + ++++ Q L + D DR Sbjct: 8 ILVTGGAGYIGSHTVLAL-KQAGYDVVILDNLVY-GHRDLVEKVLQVEL---VVGDTGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K DA+++F+A ++V S+ ++ N++GT LLE + + ++ Sbjct: 63 SLLDELFKSRHFDAVMHFSAYAYVGESVSDPAKYYRNNVLGTLTLLEA--MLAASIN--- 117 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 +F+ ST YG ED P +P +PY ATK + ++ + YG+ + Sbjct: 118 ----KFVFSSTCATYGVPKSVPIPEDHPQDPINPYGATKLMVERILADFDVAYGLKSVRF 173 Query: 182 -------SNCSNNYGPYHFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 +N G H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGANPDGLLGEDHNPETHLIPLVLLTALGKRKSISIFGTDYPTPDGTCIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D HV L +LK G E +N+G GF + +I T L Sbjct: 234 NDLADAHVLGLEYLLKGGD-SEVFNLGNGQ-----------GFSVREVIAAGEQVTGLPI 281 Query: 283 FIED---RPGHDRRYAIDSSKIKSEIGWFP 309 +E+ RPG K + +GW P Sbjct: 282 AVEECDRRPGDPPSLIGSGEKARKILGWQP 311 >gi|311033266|ref|ZP_07711356.1| NAD dependent epimerase [Bacillus sp. m3-13] Length = 324 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 39/337 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGGAGFIGS LC L+N +V +D L+ N I+ SN ++F+ DI D Sbjct: 14 FLITGGAGFIGSNLCEVLLNK-GYRVRCLDNLSIGKKSNIDLFINNSN-YTFINGDIRDL 71 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A D +++ AA V RSI + NI GT ++E R + Sbjct: 72 DTCMHACDGV--DYVLHQAAWGSVPRSIEMPLLYEEVNIKGTLNMMEAAR---------Q 120 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-----YLVLAWGHTYGI 177 + +F+ S+ VYG E N SPY+ TK ++ Y L TYG+ Sbjct: 121 NNIKKFVYASSSSVYGDEPNLPKLEGREGNLLSPYALTKKVNEEYGRLYKTLYNLDTYGL 180 Query: 178 PVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA- 232 N +G P+ +IP I ++++G + GDG+ RD+ Y+E+ + A Sbjct: 181 RYF-----NVFGRRQDPDGAYAAVIPKFIRQLLKGERPTINGDGRQSRDFTYIENVIEAN 235 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEI-GFLLDALIPKSYSHTELIRFIEDRPGH 290 L +I G+ +NI ID+ E+ G L + P F +R G Sbjct: 236 LKACTASSQIAGQAFNIAYGGREYLIDVYDELCGALKKDIKPI---------FGSNRTGD 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + D SK +G+ P+ + E G+ + + WY +N Sbjct: 287 IKHSNADISKAIDYLGYRPEWSFERGIAEAIEWYKEN 323 >gi|257058815|ref|YP_003136703.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802] gi|256588981|gb|ACU99867.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802] Length = 321 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 53/340 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ IV GGAGFIGS L L+ + I V V D LT +G+ +L+ I+ +Q DI Sbjct: 1 MKAIVIGGAGFIGSHLVEQLL-EKGISVKVYDNLT-SGSSGNLRSIASE--IELIQDDIR 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSC 117 + + A+K D + + AA + V +S+ L A E T + LW + Sbjct: 57 HFDGLVKAMKGV--DWVFHLAALTSVAQSVDNPLLAHEINNTGTLNV--------LWAAV 106 Query: 118 LSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S+ R + S+ VYG S + D+P P SPY+A+K +++ ++ YG Sbjct: 107 QSKVS----RVIISSSCAVYGDSHTPPVRETDLPV-PKSPYAASKLTAEAFASSFYAAYG 161 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV----FLYGDGQNVRDWLYVEDHVRA 232 +P L N YG P+ I R IE +YGDG RD+++V D +A Sbjct: 162 LPSLCLRYFNVYGERQRPDSDYAAVIPRFIEAYRTHQTPHIYGDGYQSRDFIHVRDVAKA 221 Query: 233 LYL-------VLKKGRIGERYNIG---GNNERKNIDIVFE-IGFLLDALIPKSYSHTELI 281 +L VL R+ +NIG N R+ +DI+ E +G+ IP Sbjct: 222 NFLAAAVEASVLSHYRV---FNIGTGVSTNLRELLDIIAESVGY----EIPP-------- 266 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 +F R G + D + ++G+ P +++SGL V Sbjct: 267 QFHSARTGDIQHSCSDITLATKKLGFSPTIDLKSGLKNLV 306 >gi|148380056|ref|YP_001254597.1| UDP-glucose epimerase [Clostridium botulinum A str. ATCC 3502] gi|153933389|ref|YP_001384353.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153934595|ref|YP_001387890.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|148289540|emb|CAL83641.1| putative UDP-glucose epimerase [Clostridium botulinum A str. ATCC 3502] gi|152929433|gb|ABS34933.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930509|gb|ABS36008.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] Length = 307 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSNVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGYPGYLPIDEKNGIMPISYYGLSKYTAEEYIRLFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + + ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SSGS-KERFNIG-------TGVYTSVKELAENMIDIIGLKCN-IEYESARKGDITNSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLEKTIEYYKNN 304 >gi|68536175|ref|YP_250880.1| hypothetical protein jk1098 [Corynebacterium jeikeium K411] gi|68263774|emb|CAI37262.1| galE [Corynebacterium jeikeium K411] Length = 344 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 150/330 (45%), Gaps = 48/330 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAG++GS +C ++ + +V V+D L+ GN ++ + + +F++ DI Sbjct: 19 HIVVTGGAGYVGS-VCASVLLEHGFRVTVVDDLS-TGNGYAVPDGA-----TFVEGDI-- 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ I A+++FAA S V S+ D + N+ + LL++ R Sbjct: 70 RDVISDVFATGDVAAVMHFAARSLVGESVEKPDIYWHHNVGTSLYLLDQMR--------- 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 + + ST YG ++ +EDMP P++PY A+K + D+++ ++ + YG+ Sbjct: 121 EHGVQNLVFSSTAATYGEPEQVPITEDMPTAPTNPYGASKLAIDHMITSYANAYGLAATS 180 Query: 181 --LSNCSNNYGP----YHFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVE 227 N + YG + LIPL + + H+ ++G DG VRD++++ Sbjct: 181 LRYFNVAGAYGDIGENHKVETHLIPLVLQVALGHREHISIFGTDYPTADGTAVRDYIHIR 240 Query: 228 DHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D A L G+ +N+G G + R+ ID E+ IP S Sbjct: 241 DLADAHLLAAASNTAGQHRIFNLGSGDGFSVRQVIDTCREV---TGHPIPAVES------ 291 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S+K K+E+GW P + Sbjct: 292 --PRRAGDPATLIASSAKAKAELGWNPTRS 319 >gi|253567920|ref|ZP_04845331.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_6] gi|251841993|gb|EES70073.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_6] Length = 356 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKG-------RIGERYNI------------------GGNN 252 RDW Y +D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID+ G +L + PK + RP + D +K ++ +GW P++ Sbjct: 285 DEKGIDVA--TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKARTLLGWNPRKT 331 >gi|154685647|ref|YP_001420808.1| GalE1 [Bacillus amyloliquefaciens FZB42] gi|154351498|gb|ABS73577.1| GalE1 [Bacillus amyloliquefaciens FZB42] Length = 330 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 57/338 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+N + + +D L G+ ++ E + F DI Sbjct: 1 MAILVLGGAGYIGSHAVDQLLNK-GFKTIAVDHLQ-TGHRKAVHEKA-----VFYHGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS + +++FAA+S V S+ + N+ GT I LE + Sbjct: 54 DKPFLRSVFAKENVTGVLHFAAQSLVGESMKDPLSYFNNNVYGTQITLEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-G 176 +F I S+ VYG +K +EDMP P S Y +K ++ + L W T G Sbjct: 106 ----EFGVKHIVFSSSAAVYGEPEKVPITEDMPEKPESAYGESKLMAEKM-LKWCETACG 160 Query: 177 IP--------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNV 220 I V + + G H PE LIP+ + T + + V ++G DG + Sbjct: 161 IKYVSLRYFNVAGAKTDGSIGEDHHPETHLIPILLQTALGQREEVLIFGTDYDTKDGTCI 220 Query: 221 RDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++V D + A L L+ G +N+G ++ GF + + + Sbjct: 221 RDYVHVSDLIDAHILALEYLQNGGDSGIFNLGSSS-----------GFSVSEMAEAARQV 269 Query: 278 TEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 TE +R RPG S K ++ +GW P++ Sbjct: 270 TERDIKVRAAARRPGDPSTLIASSDKARNILGWNPKQT 307 >gi|46580859|ref|YP_011667.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601831|ref|YP_966231.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] gi|46450279|gb|AAS96927.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562060|gb|ABM27804.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4] gi|311234558|gb|ADP87412.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1] Length = 316 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 140/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ D +VL +D + G +++ + ++ F ++ DI Sbjct: 6 RVLVTGGAGFVGSHLCDRLLKDGH-EVLCVDNY-FTGARANVEHLLENRRFELVRHDI-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T + G + L Sbjct: 62 -----TFPLYVEVDEIWNLACPASPVHYQHDPVQTIKTCVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R Q ST EVYG + +E+ P S Y K ++ L A+ G Sbjct: 107 KRVGARIFQASTSEVYGDPAEHPQTENYWGNVDPIGIRSCYDEGKRCAEALFFAYHRQNG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL- 233 + + + N YGP P +++ I + + + +YGDG R + Y+ D + + Sbjct: 167 LDIRVGRLFNTYGPRMHPNDGRVVSNFIMQALRNEPITIYGDGSQTRSFCYIHDLIECMI 226 Query: 234 -YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ L G G NIG E F I L + +I S + I + G R Sbjct: 227 RFMDLPPGLHGP-VNIGNPAE-------FTIRELAETVIDLVGSRST-IAHLPLPSGDPR 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S ++ ++GW PQ + GL T+ ++ Sbjct: 278 QRRPDISTVREKLGWEPQTQLREGLRHTIAYF 309 >gi|16264189|ref|NP_436981.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti 1021] gi|15140314|emb|CAC48841.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti 1021] gi|301602492|gb|ADK79128.1| UDP-xylose 4-epimerase [Sinorhizobium meliloti] Length = 328 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 65/331 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L + I+ +V D LT GN ++++ F+Q DI D Sbjct: 5 RILVTGGAGYIGSHTAKLLRLE-GIEPVVYDNLT-TGNRSAVR------WGPFVQGDILD 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ QPDA+++FAA ++V S+ ++ N+ GT LL+ R Q Sbjct: 57 GRRLIEVIEAHQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACR-------QT 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL- 180 D+ F S+ YG E P P +PY TK +++++ + + + + Sbjct: 110 GVDKVIF--SSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVS 167 Query: 181 ---LSNCS----NNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 + C + G +H PE LIP A+ H+ ++G DG VRD+++ Sbjct: 168 LRYFNACGADPEGDLGEWHDPETHLIPRALMAAAGRIPHLEIFGEDYDTPDGTCVRDYIH 227 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV A Y L KG GGN + +G + +S E++ Sbjct: 228 VADLASAHVLA-YRHLAKG--------GGN-------VALNLG------TGRGFSIKEVL 265 Query: 282 RFIEDRPGHD------RRYAIDSSKIKSEIG 306 R I + GHD RR A D + ++ G Sbjct: 266 RTIGEITGHDVPVVFRRRRAGDPPALYADAG 296 >gi|257887057|ref|ZP_05666710.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257895622|ref|ZP_05675275.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|293377767|ref|ZP_06623956.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] gi|257823111|gb|EEV50043.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257832187|gb|EEV58608.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|292643767|gb|EFF61888.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] Length = 329 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +E+ P NP +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G N + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSNKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREILGWKPE 305 >gi|217978854|ref|YP_002363001.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] gi|217504230|gb|ACK51639.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] Length = 308 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 137/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTG +GF+G AL L+ + AG S + ++ ++D+ D Sbjct: 4 KALVTGASGFLGRALVPALLASGA-------SVIAAGRGQS--PFAAHPRLAWRRIDLAD 54 Query: 62 RECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L+E D I + A + + L E NI+G+ ++E ++ Sbjct: 55 PA---APLREITSGVDCIYHLAWSTVPSEASLSPAEDARANIVGSLRIIES-------IA 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + F S +YG L + SED P NP S Y +K + + + + T G+ Sbjct: 105 PGAAPRLIFAS-SGGAIYGRLRQAPASEDHPLNPISAYGLSKRTVEAYLDLFADTIGLRP 163 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITR----MIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N +GP PE+L A+T+ + G+ + L+GDG VRD++Y++D V AL Sbjct: 164 ASLRIGNLFGPGQNPERLF-GAVTQFSKAALTGAPIILFGDGSTVRDYVYIDDAVDALIR 222 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 + NIG R DI+ A + + RP Sbjct: 223 AAQAQNSSRALNIGSGEGRSLNDII--------ACLEAQLGRPVKVERRPPRPFDTPLSI 274 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +D S+ + EIGW + + E G+ +T+ D Sbjct: 275 LDPSRARREIGWSARVSFEDGVARTLKSLAD 305 >gi|332559112|ref|ZP_08413434.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] gi|332276824|gb|EGJ22139.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] Length = 328 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 146/334 (43%), Gaps = 56/334 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDIC 60 R++VTGGAG+IGS C+ L + + D L+ Q+ F L + D+ Sbjct: 4 RVLVTGGAGYIGSHACKVL-KRAGFEPVTFDNLSTG--------WEQAVKFGPLARGDLM 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I +AL+ ++P A+++FAA S V S+ + N+ G LLE T ++ Sbjct: 55 DRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEAT------VAA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 K+ F+ ST YG D + ED P P + Y A+K + + +V +G +G+ Sbjct: 109 GVKN---FVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHT 165 Query: 178 -----PVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 V ++ G H PE LIPL + + G L +G DG +RD+ Sbjct: 166 IFRYFNVAGADPEGEVGEQHDPETHLIPLMLD-AVAGRRPALTVFGTDYPTRDGTCIRDY 224 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTE 279 ++V D A L L R GG N VF + GF + +I +S + T Sbjct: 225 VHVMDLAHAHVLGLN------RLLDGGPNR------VFCLGTGRGFSVREVIEQSRAVTN 272 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I F + R G S + E+GW P+ Sbjct: 273 REVPILFGDRRSGDAAALVCGSERAVRELGWEPE 306 >gi|149200348|ref|ZP_01877367.1| UDP-glucose 4-epimerase [Lentisphaera araneosa HTCC2155] gi|149136584|gb|EDM25018.1| UDP-glucose 4-epimerase [Lentisphaera araneosa HTCC2155] Length = 338 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 35/272 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 +++VTGGAG+IGS C L+N +V+V+D L + +L +++++ F +VD+ Sbjct: 3 KILVTGGAGYIGSHTCLELLNS-GYEVVVVDDLSNSVTESLTRVEQLANGKKIKFHKVDL 61 Query: 60 CDRECIRSA-LKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+E + +KE A+++FAA+ V S+ + + NI G+ L E + Sbjct: 62 LDKEALNEVFVKEGNVHAVIHFAAKKAVGESVEKPLYYYSNNITGSLNLFE-------VM 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + D+ F +T VYG + ED ++PY TKA + +++ G Sbjct: 115 KANNVDKIVFSSSAT--VYGDPESVPIKEDAHIGATNPYGHTKAMMEQILMDTGKATDWG 172 Query: 179 VLLSNCSNNYGPY---------HFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V L N G + +P L+P ++++ G V ++G DG VR Sbjct: 173 VALLRYFNPVGAHESGTIGEDPEYPNNLLPF-VSQVAAGIREQVTIFGDDYDTPDGTGVR 231 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIG 249 D+++V D HV+++ + + + YNIG Sbjct: 232 DYIHVVDLAQAHVKSIEKLDTQDKGTLIYNIG 263 >gi|71277971|ref|YP_270311.1| NAD-dependent epimerase/dehydratase family protein [Colwellia psychrerythraea 34H] gi|71143711|gb|AAZ24184.1| NAD-dependent epimerase/dehydratase family [Colwellia psychrerythraea 34H] Length = 344 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 44/344 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEIS------QSNLFSFLQV 57 ++TG AGFIGS L L+ + +V+ +D G+ ++ E+ Q F F++ Sbjct: 19 LITGCAGFIGSNLLETLLLLNQ-KVVGLDNFA-TGHQHNFDEVQTQVSAEQWQNFYFVKG 76 Query: 58 DICDRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRL 113 DI E ++AL ++ D I++ AA V RSI AD +T NI G Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSI--ADPLLTNSANITG---------- 124 Query: 114 WWSCLSQDKKDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + + L+ K+ Q + F+ ++ YG ED P SPY+ TK ++ + Sbjct: 125 FLTMLTAAKETQVKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFH 184 Query: 173 HTYGIPVLLSNCS-----NNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDW 223 TYG+ NC+ N +G P+ +IP MI + + GDG+ RD+ Sbjct: 185 KTYGL-----NCTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDF 239 Query: 224 LYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +VE+ V+A L G+ YN+ +R +++ +F L AL + + Sbjct: 240 CFVENAVQANILAATANDAGKNQVYNVA-LGDRTSLNTLFNS--LKVALQANGVDYQKSP 296 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + + R G R D SK KS IG+ P+ ++ G++K + WY+ Sbjct: 297 TYQDFRAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYI 340 >gi|312863422|ref|ZP_07723660.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] gi|311100958|gb|EFQ59163.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] Length = 333 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 48/347 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEAGQEKVVVVDNLV-TGHRAAVHPDA-----VFYEGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+E +R KE P DA+++FAA S V S+ ++ N G L+E + C Sbjct: 55 DQEFMRKVFKE-NPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLIE---VMNEC- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 D + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 110 -----DVKYIVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMKWSDQAYGIK 164 Query: 178 --PVLLSNCS-----NNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVR 221 P+ N + + G H PE L+P+ I ++ +G + ++G DG NVR Sbjct: 165 YVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGDDYNTPDGTNVR 223 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 224 DYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA-- 281 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 ------DRRPGDPDTLIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|255323441|ref|ZP_05364572.1| UDP-glucuronate 5'-epimerase [Campylobacter showae RM3277] gi|255299478|gb|EET78764.1| UDP-glucuronate 5'-epimerase [Campylobacter showae RM3277] Length = 352 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 44/260 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAGNLNSLKEISQ 48 M+++VTG AGFIG L LV ND L + +L AG + EI Sbjct: 1 MKILVTGTAGFIGFHLANALVARGDEVVGYDVINDYYDVNLKLARLKTAGF--DVSEIDY 58 Query: 49 SNLFS--------FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 L + F++ D+ D + ++ + + D +VN AA++ V S++ +I +N Sbjct: 59 GKLITSKTHPNLKFIKADLADEKTMKELFAKEKFDVVVNLAAQAGVRYSLINPKAYIDSN 118 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NP 153 I G +LE C + K+ + S+ VYG +E+MP+ +P Sbjct: 119 ITGFMNILE------CCRHNEIKN---LVYASSSSVYG------LNENMPFSTHEAVNHP 163 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 S Y+ATK S++ + + H + +P YGP+ P+ + L + ++G + + Sbjct: 164 ISLYAATKKSNEMMAHTYSHLFNVPTTGLRFFTVYGPWGRPDMALFLFVDAALKGKKIDV 223 Query: 214 YGDGQNVRDWLYVEDHVRAL 233 + G+ RD+ YV+D V+ + Sbjct: 224 FNYGKMKRDFTYVDDIVKGV 243 >gi|254168150|ref|ZP_04874997.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469] gi|197622916|gb|EDY35484.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469] Length = 285 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 48/321 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TG +G +GS L + N + + + + + F+ + DI R Sbjct: 2 ILITGSSGQLGSYLIESIPNSVGLDI-------------------RPSKFTEIVGDI--R 40 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + LK ++ DAI++ AA+ V +S+ NI+GT LLE R K Sbjct: 41 GNLDILLKNYEIDAIIHAAAQVSVVKSVEDPKNDADNNIMGTINLLEYAR---------K 91 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D +F+ IS+ VYG E P P SPY +K + + L + YG+ V Sbjct: 92 YDVEQFIYISSAAVYGEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYSELYGLKVASI 151 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N + P P +I + ++R +G + +YGDG+ RD++ V+D V + L L Sbjct: 152 RPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQDVVHLVKLALT 211 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--GHDRRYAI 296 K G YN G E + E+ ++ L K I+ + D+P G R+ Sbjct: 212 KNADG-VYNCGTGKETS----INELAKIIAELSGKD------IKIVHDKPREGDIRKSYA 260 Query: 297 DSSKIKSEIGWFPQENMESGL 317 SK + EI + P+ N++ L Sbjct: 261 YISKAR-EIEYEPKTNLKEDL 280 >gi|148380682|ref|YP_001255223.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|153933467|ref|YP_001384966.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153936011|ref|YP_001388436.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|226950136|ref|YP_002805227.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|148290166|emb|CAL84285.1| putative dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|152929511|gb|ABS35011.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931925|gb|ABS37424.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|226843668|gb|ACO86334.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 354 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/362 (22%), Positives = 152/362 (41%), Gaps = 55/362 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLT-----------YAGNLNSLKEI 46 M ++VTGGAGFIG R++V L ++ V+ +D L+ Y L+ +K Sbjct: 1 MNILVTGGAGFIG----RWVVKTLLLEGHEVVALDNLSNGRLENIYEFVYEDKLDYIKN- 55 Query: 47 SQSNL-------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT 99 ++ N+ F F++ DI D + K+ + + + A +V SI Sbjct: 56 NKENISGLEGENFKFIKGDIRDEALLDELFKKNKFHIVYHLGASINVQESIDDPKTTFYN 115 Query: 100 NIIGTFILLEETRLW------------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 + IGTF +LE+ + W +K + + +ST VY + E Sbjct: 116 DTIGTFNILEKCKTQMFGKKAKMEGDKWILDKNEKAYPCKVVFMSTCMVYDKAPEVGIDE 175 Query: 148 DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITR 204 + P SPY K +++ +VL++ + Y +P ++ N YGP+ ++ + I Sbjct: 176 EHRVKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRPFNTYGPFQKTNGEGGVVAIFINN 235 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI- 263 ++ ++ +YG G RD LYV+D + K + + G I+ + +I Sbjct: 236 YLQNKNLNIYGTGDQTRDLLYVKDCANFVVEAGYKDSVNGQIVNAGTGRDITINELAQII 295 Query: 264 --GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G + +P + +E+++ + K K +GW P +E G+ +T Sbjct: 296 SSGKVKINHVPHIHPQSEIMKL-----------KCNYKKAKELMGWEPNYTLEGGIEETK 344 Query: 322 CW 323 W Sbjct: 345 QW 346 >gi|163743890|ref|ZP_02151261.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis 2.10] gi|161382831|gb|EDQ07229.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis 2.10] Length = 346 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 47/344 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAG+IGS C+ L + +TY + ++ + F + D+ D Sbjct: 22 HILVTGGAGYIGSHACKAL------RAAGFTPVTYDNLVTGWQDAVK--FGPFEKGDLSD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QP A+++FAA S V ++ + T N+ G+ L+E + Sbjct: 74 RARLDEVFAKYQPAAVMHFAALSQVGEAMSEPGRYWTNNVGGSLTLIE---------AAV 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D F+ ST YG D + E P P + Y A+K + + ++ +G ++G+ ++ Sbjct: 125 AADCLDFVFSSTCATYGEHDNVVLDESTPQVPLNAYGASKRAVEDILRDFGASHGLRSVI 184 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 ++ G +H PE L+PL + I+G + ++G DG VRD++ Sbjct: 185 FRYFNVAGADPEAEVGEFHRPETHLVPL-VLDAIDGKRDALTIFGTDYDTPDGTCVRDYV 243 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D V A L LK G+ + +N+G V E+ +A KS H+ Sbjct: 244 HVCDLVDAHVLGLNWLKDGKGSQVFNLGTGTGFS----VREVMDKAEATTGKSVPHSIGP 299 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWY 324 R R G + S + + +GW P + ++E+ + W+ Sbjct: 300 R----RAGDCTKLVSGSVRAATLLGWEPTRSDLETMIADAWGWH 339 >gi|186684266|ref|YP_001867462.1| UDP-glucose 4-epimerase [Nostoc punctiforme PCC 73102] gi|186466718|gb|ACC82519.1| UDP-glucose 4-epimerase [Nostoc punctiforme PCC 73102] Length = 332 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 49/331 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+++D L Y G+ + +++I Q L + D DR Sbjct: 8 ILVTGGAGYIGSHTVLAL-KQAGYNVVILDNLVY-GHRDLVEKILQVEL---VVGDTGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + K A+++F+A ++V S+ ++ N++GT LLE + L+ Sbjct: 63 ALLDHLFKTRDIAAVMHFSAYAYVGESVTDPAKYYRNNVVGTLTLLE------AMLTASV 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K +F+ ST YG + E+ P NP +PY ATK + ++ + YG + Sbjct: 117 K---KFVFSSTCATYGVPEFVPIPENHPQNPINPYGATKLMVERILSDFDVAYGFQSVRF 173 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 +N + G H PE LIPL + T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGANPNGLLGEDHNPETHLIPLVLMTALGKRKSISIFGTDYPTPDGTCIRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D H+ L +LK G E +N+G + GF + +I + T Sbjct: 234 NDLADAHILGLEYLLKGGD-SEVFNLGNGS-----------GFSVREVIAAAEQVTGTSI 281 Query: 283 FIED---RPGHDRRYAIDSSKIKSEIGWFPQ 310 +E+ RPG S K ++ +GW PQ Sbjct: 282 PVEEHDRRPGDPPILIGTSEKARTILGWQPQ 312 >gi|261855689|ref|YP_003262972.1| UDP-glucose 4-epimerase [Halothiobacillus neapolitanus c2] gi|261836158|gb|ACX95925.1| UDP-glucose 4-epimerase [Halothiobacillus neapolitanus c2] Length = 323 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 50/330 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + +YL + +V+V+D L+ G+ ++++ + D+ D Sbjct: 4 ILVVGGAGYIGSHMVKYL-DRAGYRVVVLDNLS-TGHADAVR------YGELIVGDMADS 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + + + DA+++FAA S V S+ ++ N+ T LL+ Sbjct: 56 ELLDRLFRSHRFDAVMHFAAFSLVGESVGNPGKYYRNNVANTLNLLDAM----------V 105 Query: 123 KDQFR-FLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + Q R F+ ST +G E P P +PY +K ++L+ + YG+ + Sbjct: 106 RHQVRHFVFSSTAATFGEPQSDRIDESHPQKPINPYGRSKLMVEHLLADYDAAYGLKSVC 165 Query: 182 --------SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRDWL 224 ++ G H PE LIPL + + G SH+ ++G DG +RD++ Sbjct: 166 LRYFNAAGADPEGELGERHNPETHLIPL-VLQAASGRRSHIHVFGTDYDTPDGSCLRDYI 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V+D A L L+ + +++N+G + +D++ + IP Sbjct: 225 HVQDLCSAHQLALQWLQARQQSQQFNLGNGDGYSVLDVIETARTVTGQQIPV-------- 276 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 IED R G R D++ +GW P+ Sbjct: 277 -LIEDRRAGDPARLIADATFAHQHLGWKPE 305 >gi|52001491|gb|AAU21546.1| GalE [Streptococcus thermophilus] Length = 333 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 152/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLV-TGHRAAVHPDA-----IFYQGDLS 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMRWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L++G +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLREGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPSEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 --------DRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWH 322 >gi|312880519|ref|ZP_07740319.1| GDP-mannose 4,6-dehydratase [Aminomonas paucivorans DSM 12260] gi|310783810|gb|EFQ24208.1| GDP-mannose 4,6-dehydratase [Aminomonas paucivorans DSM 12260] Length = 371 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 135/324 (41%), Gaps = 54/324 (16%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E +PD I N AA+SHV S + ++ +GT LLE R+ Sbjct: 64 DLTDATNLIRIVQEVRPDEIYNLAAQSHVQVSFETPEYTANSDALGTLRLLEALRI---- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +K RF Q ST E++G + + E P+ P SPY+A K + ++ + + YG+ Sbjct: 120 LGLEKTT--RFYQASTSELFGKVQETPQRETTPFCPRSPYAAAKLYAYWITVNYREAYGV 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A R+ G Y G+ RDW + D+V A+ Sbjct: 178 FASNGILFNHESPLRGETFVTRKITRAAARIRLGLQKRAYLGNLDAKRDWGHARDYVEAM 237 Query: 234 YLVLKKGR-------IGERYNI------------------GGNNERKNIDIVFEIGFLLD 268 +LVL+ R G + + G E + ID E+ L+D Sbjct: 238 WLVLQHHRPDDFVIATGRTHTVREFADAAFREAGLPLRWEGSGVEERGIDGAGEVRVLVD 297 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 P+ + TE+ + D +K + E+GW P+ E + V D N Sbjct: 298 ---PRYFRPTEVDLLLG-----------DPTKAREELGWTPRVEFEELVRTMVEE--DLN 341 Query: 329 WWWRPLYKELKPDNDYSKWKNLNE 352 + R L L D YS +L E Sbjct: 342 LFRREL---LCRDAGYSVCPSLEE 362 >gi|84684380|ref|ZP_01012281.1| putative sugar nucleotide dehydratase [Maritimibacter alkaliphilus HTCC2654] gi|84667359|gb|EAQ13828.1| putative sugar nucleotide dehydratase [Rhodobacterales bacterium HTCC2654] Length = 323 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 85/337 (25%), Positives = 146/337 (43%), Gaps = 43/337 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L L+ D +V+ +D L + G ++ + + F F++ D+ Sbjct: 10 RILVTGGAGFIGSHLIDRLL-DQGHEVICLDNL-FTGTKRNIDHLHGNPRFEFMRHDV-- 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 66 -----TFPLYVEVDEIYNLACPASPVHYQHDPVQTTKTSVHGAI----------NMLGLA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 K+ + + Q ST EVYG D + + Y NP S Y K ++ L + Sbjct: 111 KRLRCKIFQASTSEVYG--DPSVHPQPESYWGNVNPIGTRSCYDEGKRCAETLFFDYHRQ 168 Query: 175 YGIPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + ++ N YGP +H +++ I + + G + +YGDG R + YV+D V Sbjct: 169 HGLEIKVARIFNTYGPRMHHADGRVVSNFIVQALSGRDITIYGDGSQTRSFCYVDDLVEG 228 Query: 233 -LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPG 289 L L+ + N+G E F I L + ++ + S ++++ +D P Sbjct: 229 FLRLMATDEDVTGPVNLGNPRE-------FTIAELAEQVVAMTGSGSKIVYEPLPQDDPK 281 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D KS +GW P +E GL +TV ++ D Sbjct: 282 QRRP---DIGLAKSTLGWEPSVQLEDGLVRTVDYFTD 315 >gi|298290574|ref|YP_003692513.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] gi|296927085|gb|ADH87894.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] Length = 336 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS LC L+ V+ +D + G ++++ + FS ++ D+ D Sbjct: 18 RVLITGGAGFIGSHLCDRLIEG-GAYVICLDNFS-TGRRHNVEHLVGHPRFSLIRHDVID 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWSCLS 119 + D I N A + + AD T T+++G LL+ Sbjct: 76 PIAV-------DVDQIYNLACPA--SPTAYAADPVHTTKTSVLGALNLLKLA-------- 118 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 ++ R LQ ST E+YG E P P + Y K ++ L + Sbjct: 119 --TENGARILQASTSEIYGDPQVSPQPEAYWGHVDPTGPRACYDEGKRCAESLFFDYARR 176 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G + ++ N YGP + ++ I + G+ + +YGDG R + YV++ V A Sbjct: 177 FGTRIKIARIFNTYGPRMRGDDGRVTSNLIIEALRGTDMTVYGDGSQTRSFCYVDETVEA 236 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L+ + NIG +ER D + + + SH L ++D Sbjct: 237 LIRLMATPDGVEGPVNIGNPDERTIQDFAGVVQRMTGS--SSRISHRPLP--VDD----P 288 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RR D S+ +GW P ++E+GL T+ ++ Sbjct: 289 RRRCPDISEATRLLGWVPTISLEAGLALTIDYF 321 >gi|288800118|ref|ZP_06405577.1| GDP-mannose 4,6-dehydratase [Prevotella sp. oral taxon 299 str. F0039] gi|288333366|gb|EFC71845.1| GDP-mannose 4,6-dehydratase [Prevotella sp. oral taxon 299 str. F0039] Length = 357 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 72/354 (20%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS L +L+ N +I+ L +D+ ++++ Sbjct: 7 LITGITGQDGSHLAEFLIDKGYEVHGLLRRSSSFNTARIEHLYLDEW--------VRDMK 58 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 Q L + D+ D + + E +P I N AA+SHV S + T+ IG L Sbjct: 59 QKRLVNLHWADMTDSSSLIRIIGEIRPTEIYNLAAQSHVKVSFDVPEYTADTDAIGVLRL 118 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ DK R Q ST E+YG + + E P+ P SPY+ K ++ Sbjct: 119 LEAVRI----CQLDKT--CRIYQASTSELYGKVQEIPQRETTPFYPRSPYAVAKLYGYWI 172 Query: 168 VLAWGHTYGIPV---LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDW 223 + + +YG+ +L N F + I LA +R+ +G LY G+ RDW Sbjct: 173 IKNYRESYGMYCCNGILFNHEGERRGETFVTRKITLAASRIAKGYQDKLYLGNLDARRDW 232 Query: 224 LYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNNERKNID 258 Y +D+V ++L+L++ GE + + G E + ID Sbjct: 233 GYAKDYVECMWLMLQQPEADDFVIATGEMHTVREFCDLAFKEAGIELRWEGSGVEERGID 292 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 I +L + PK + RP + D SK K ++GW P + Sbjct: 293 IA--TNRVLVEVDPKYF-----------RPCEVEQLLGDPSKAKEKLGWNPTKT 333 >gi|228477733|ref|ZP_04062362.1| UDP-glucose 4-epimerase [Streptococcus salivarius SK126] gi|228250622|gb|EEK09833.1| UDP-glucose 4-epimerase [Streptococcus salivarius SK126] Length = 333 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 151/349 (43%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV + +V+V+D L G+ ++ + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVETGQEKVVVVDNLV-TGHRAAVHPDA-----VFYEGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R KE P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFKE-NPDVDAVIHFAAYSLVAESMEKPLKYFDNNTSGMVKLLEVMNECGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG ++ E P NP +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++ D A L L+KG +N+G + N+ I+ + IP + Sbjct: 222 VRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG S K ++ +GW PQ +N+E + W+ Sbjct: 282 GR--------RPGDPDTLIASSEKARTVLGWKPQFDNIEKIIESAWAWH 322 >gi|183222577|ref|YP_001840573.1| putative dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912612|ref|YP_001964167.1| nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777288|gb|ABZ95589.1| Nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780999|gb|ABZ99297.1| Putative dTDP-glucose 4,6-dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 310 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 50/338 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGFIGS L L+N Q++V+D N +S N F ++ DI D Sbjct: 4 RILITGGAGFIGSHLAENLLNAGN-QIIVLDNFHTGRKENLTHLLSHPN-FELIRHDITD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I TN++GT + L Sbjct: 62 S-------IKLEVDQIYNMACPASPVHYQSNPIKTIKTNVLGTM----------NMLGLA 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-----------SPYSATKASSDYLVLA 170 K+ + R LQ ST EVYG+ + P N S S Y K ++ L Sbjct: 105 KRVKARILQASTSEVYGN------PLEHPQNESYWGNVNTIGIRSCYDEGKRVAETLCFD 158 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + +G+ + + N YGP P+ +++ I + + G + +YGDG R + YV+D Sbjct: 159 YHRQHGVDIRVIRIFNTYGPRMIPDDGRVVSNFIVQALRGEDITIYGDGSQTRSFCYVDD 218 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIED 286 V+ + ++ N+G + E F + L + +I ++ S +++I +D Sbjct: 219 LVKGIINMMNVENFVGPVNLGNDGE-------FTVKELAELIIKETGSKSKIIYLPLPQD 271 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P R + S K ++ + + G+ KT+ ++ Sbjct: 272 DPA---RRKPNLSLAKEKLNYSTTVPLLEGVKKTIEYF 306 >gi|149181212|ref|ZP_01859711.1| UDP-glucose 4-epimerase [Bacillus sp. SG-1] gi|148851111|gb|EDL65262.1| UDP-glucose 4-epimerase [Bacillus sp. SG-1] Length = 306 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 38/331 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 M+++VTGG GFIGS Y+VN L +V+++D + GN NS+ + + Q+ Sbjct: 1 MKILVTGGNGFIGS----YVVNSLVEGGYKVVIVD--SSIGNKNSINKKVKC-----YQL 49 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 +I D+ KE +PDA+++ AA+ V RS++ NI+GT +L E + Sbjct: 50 NITDKNLSNVFDKE-RPDAVIHMAAQVDVSRSVMEPIMDAEVNILGTINVLNECVKYKVK 108 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ST VYG SE+ P S Y +K + + + A+ +G+ Sbjct: 109 KVVYS---------STSAVYGENVASEISENEKIMPISFYGISKYTPELYLEAFFKIHGL 159 Query: 178 PVLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + SN YG + +IP+ I ++E ++GDG+ RD++Y D A Sbjct: 160 KYTILRYSNVYGERQGIKGEGGVIPIFIHELMEDRSPVIFGDGKQTRDFIYAGDVAEANV 219 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL-DALIPKSYSHTELIRFIEDRPGHDRR 293 L + E NI + + +I L+ A+ P F R G Sbjct: 220 SALNAADM-EVLNISSGISITILQLFEQIRDLMGKAVTP---------NFRGGRSGDILH 269 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + +SK + W P+ N+ GL KT+ +Y Sbjct: 270 SRLANSKAIMMLSWEPKVNLPEGLRKTIDYY 300 >gi|89067374|ref|ZP_01154887.1| UDP-glucose 4-epimerase [Oceanicola granulosus HTCC2516] gi|89046943|gb|EAR52997.1| UDP-glucose 4-epimerase [Oceanicola granulosus HTCC2516] Length = 329 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 52/333 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L V D L G +S+K F Q D+ DR Sbjct: 4 ILVTGGAGYIGSHACKVLAAAGYTPV-TYDNLD-TGWRDSVK------FGPFEQGDLLDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + ++P A+++FAA S V S+ ++ N+ G+ L E + CL Sbjct: 56 DRLDQVFAAYRPAAVMHFAALSQVGESMTEPGKYWRNNVCGSLSLFEAA-IHAGCLD--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 + ST YG D + ED P + Y+A+K + + ++ +G ++G+ ++ Sbjct: 112 -----VVFSSTCATYGEQDGVVLDEDSAQQPLNSYAASKRAIEDMLDNFGASHGLRSVIF 166 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ G +H PE L+PL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEIGEFHQPETHLVPLMLD-AIDGKRDALTIFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-I 281 V D V A L +K GR +N+G GF + ++ KS S T + Sbjct: 226 VMDLVDAHVLGVKWLEDGRGSRVFNLGTGT-----------GFSVREVVDKSGSVTNREV 274 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQEN 312 +E RPG S + +E+GW P + Sbjct: 275 PILEGARRPGDATALVSGSQRAMTELGWRPTRS 307 >gi|228909320|ref|ZP_04073146.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] gi|228850409|gb|EEM95237.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis IBL 200] Length = 300 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 36/310 (11%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K ++ ++D L + N + NL +Q DI D++ + + D + AA Sbjct: 4 KHEIWILDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLVAQLFENNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ CL D K F +ST VY DK Sbjct: 64 NVQDSIDDARSTFENDTIGTFNLLEQ------CLKYDVKMVF----MSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNE 253 + + I ++ + +YGDG+ RD LYVED V A Y G I G + Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIIN----AGTGQ 226 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +I+ + E LI + + + I + ++ + K K+ + W P+ ++ Sbjct: 227 DISINKLAE-------LISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKVSL 278 Query: 314 ESGLNKTVCW 323 E G+ KT W Sbjct: 279 EDGVIKTEEW 288 >gi|149189632|ref|ZP_01867915.1| UDP-glucose 4-epimerase [Vibrio shilonii AK1] gi|148836611|gb|EDL53565.1| UDP-glucose 4-epimerase [Vibrio shilonii AK1] Length = 337 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/369 (24%), Positives = 156/369 (42%), Gaps = 60/369 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N + ++ D L A L+ ++++S + +F+Q D Sbjct: 1 MNVLVTGGAGYIGSHTCVQLIN-AGMTPVIFDNLYNAKAAVLDRIEKVSGTRP-AFIQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ + LK +++++FA V S+ E+ N+ GT +L++ R Sbjct: 59 VRDKSSLLEVLKAHNINSVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 + + S+ VYG +E P + ++PY +K A+ D+ Sbjct: 113 ---EAGVKHLVFSSSATVYGDPASVPITESFPTSATNPYGRSKLMVEECLTDFQQANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ + G P P L+P ++++ G FL +G D Sbjct: 170 TITLL--RYFNPV-GSHPTGEMGEDPQGIPNNLMPF-VSQVAVGRREFLSIFGNDYPTPD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D H+ AL L + YN+G N +D+V +P Sbjct: 226 GTGVRDYIHVMDLADGHIAALK-TLNNQKGLHVYNLGTGNGSSVLDMVKAFELASGKQVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + +E RPG D SK ++GW +++ + W W+ Sbjct: 285 --------YKIVERRPGDIAECWADPSKANKDLGWVATRSLQD--------MTTDGWKWQ 328 Query: 333 PLYKELKPD 341 E P+ Sbjct: 329 SQNPEGYPE 337 >gi|69246798|ref|ZP_00604127.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257878551|ref|ZP_05658204.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257883186|ref|ZP_05662839.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257889251|ref|ZP_05668904.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257894691|ref|ZP_05674344.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|258615922|ref|ZP_05713692.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|260560137|ref|ZP_05832315.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|261208165|ref|ZP_05922839.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289566214|ref|ZP_06446647.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|293559382|ref|ZP_06675923.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] gi|294614216|ref|ZP_06694135.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|294618872|ref|ZP_06698384.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|68195089|gb|EAN09550.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257812779|gb|EEV41537.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257818844|gb|EEV46172.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257825611|gb|EEV52237.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257831070|gb|EEV57677.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|260073972|gb|EEW62296.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|260077599|gb|EEW65316.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289161992|gb|EFD09859.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|291592875|gb|EFF24465.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|291594872|gb|EFF26237.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|291606667|gb|EFF36060.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] Length = 329 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +ED P NP +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G + + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSSKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREILGWKPE 305 >gi|113474358|ref|YP_720419.1| GDP-mannose 4,6-dehydratase [Trichodesmium erythraeum IMS101] gi|110165406|gb|ABG49946.1| GDP-mannose 4,6-dehydratase [Trichodesmium erythraeum IMS101] Length = 342 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 29/322 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQV 57 R ++TG G GS L L+ + +V I + + + N + ++ I Q + + FL Sbjct: 6 RALITGITGQDGSYLAELLL-EKNYEVHGIIRRSSSFNTDRIEHIYQDSHYPDARLFLHY 64 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R ++ +P I N A+SHV S + + + +GT LLE R + Sbjct: 65 GDLTDGTTLRRIIEAVKPLEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q + RF Q + E++G + + E P+ P SPYS K + + + + +Y Sbjct: 123 --QQRTGIEVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYSCAKVYAYWQTINYRESYN 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ R++ LY G+ RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAVARILADKQKKLYLGNLDAKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++++L++ + Y I NE +I EI F +Y + E ++E P + R Sbjct: 241 MWMMLQQ-EAPDDYVI-ATNETHSIKEFLEIAF--------TYVNLEWQDYVEFDPRYLR 290 Query: 293 RYAI-----DSSKIKSEIGWFP 309 + D +K + ++ W P Sbjct: 291 PTEVDLLIGDCTKAREKLHWKP 312 >gi|332184329|gb|AEE26583.1| GDP-mannose-4,6-dehydratase [Francisella cf. novicida 3523] Length = 372 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 38/345 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 + ++TG G GS L +L+ +V I + + N + I +++ F Sbjct: 3 KALITGITGQDGSYLAEFLLEK-GYEVHGIKRRSSLFNTQRIDHIYQDPYTENRRFRLHF 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD + N AA+SHV S + N +GT +LE RL Sbjct: 62 GDLTDSTNLIRIIKEIQPDEVYNLAAQSHVAVSFELPEYTADVNGLGTLRILEAIRL--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK +F Q ST E+YG + + SE P++P SPY+ K + ++ + + YG Sbjct: 119 -LGLEKKT--KFYQASTSELYGLVHQIPQSEKTPFHPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ +RDW + D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNIDALRDWGHARDYVRM 235 Query: 233 LYLVLKKGRIGERYNIGGN--NERKNIDI-VFEIGFLLD------ALIPKSYSHT----- 278 +++L++ + + G + R+ I + EIG L+ I K S T Sbjct: 236 QWMMLQQDKPQDFVIATGKQISVREFIKLCATEIGIQLEFSGKGLDEIAKVVSITGDKAP 295 Query: 279 -----ELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMES 315 ++I I+ RP D++K K E+GW P+ +++ Sbjct: 296 ALSVGDIILRIDPRYFRPAEVETLLGDATKAKLELGWEPEISLQQ 340 >gi|242281232|ref|YP_002993361.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] gi|242124126|gb|ACS81822.1| NAD-dependent epimerase/dehydratase [Desulfovibrio salexigens DSM 2638] Length = 318 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 36/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+G+ LC L+ D V+ +D + G +++ + + F ++ D+ Sbjct: 6 RVLVTGGAGFLGTHLCERLLAD-GCDVICVDNF-FTGTKSNVTHLLSNPNFEIIRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 62 -----TFPLYLEIDEIYNLACPASPIHYQHDPVQTTKTSVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG + E P P S Y K ++ L + + Sbjct: 107 KRTRAKIFQASTSEVYGDPEVHPQPESYVGSVNPIGPRSCYDEGKRCAETLFFDYYRQHK 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP P +++ IT+ + G+ + +YGDG R + YV+D + L Sbjct: 167 VNIKVARIFNTYGPMMHPNDGRVVSNFITQALLGNPITIYGDGSQTRSFCYVDDMIEGFL 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ + N+G E F I L + +I + S +ELI + PG D + Sbjct: 227 TLMDTPDEVTGPVNLGNPTE-------FSILELAEKVIELTGSKSELI--FKPLPGDDPK 277 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E+GW P +E GL T+ ++ Sbjct: 278 QRKPDITRAKELGWEPTIQLEKGLVSTIEYF 308 >gi|158521859|ref|YP_001529729.1| UDP-glucose 4-epimerase [Desulfococcus oleovorans Hxd3] gi|158510685|gb|ABW67652.1| UDP-glucose 4-epimerase [Desulfococcus oleovorans Hxd3] Length = 337 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 149/356 (41%), Gaps = 46/356 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 ++++TGGAG+IGS C L+ +VLV+D L + A L +K I+ + F +VD+ Sbjct: 3 KVLLTGGAGYIGSHTCVSLLES-GCEVLVVDNLCNSSAVALERVKAITGRAVM-FEKVDM 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DR + K F PDA+++FA V S + N+ G+ +L E + Sbjct: 61 RDRAELDRVFKTFAPDAVIHFACLKAVGESTTDPLTYYANNVAGSVVLFE---------A 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYG 176 + + S+ VYG + +E P +PY TK + + + A G + Sbjct: 112 MEAAGVKNIVFSSSATVYGDPETVPVTEAAAICPCNPYGRTKRMIEEMLEDIHAAGKGWN 171 Query: 177 IPVLL------SNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNVR 221 I +L ++ S G P P L P +A + + +YG DG VR Sbjct: 172 IAILRYFNPVGAHASGLIGEDPRDVPNNLAPYIAQVAVGRRQQLNVYGDDYPTKDGTGVR 231 Query: 222 DWLYV----EDHVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 D+++V E HV+AL L G + YN+G +++V I ++ + Sbjct: 232 DYIHVCDLAEAHVKALEKLAQNPGLV--TYNLGTGTGHSVLEVVAAFERACGRPIARTVT 289 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R G Y D S+ + E+GW + ++ T W N +R Sbjct: 290 GR--------RAGDVAEYYADPSRAEKELGWKARRTLDDMAADTWRWQSGNPEGYR 337 >gi|289677518|ref|ZP_06498408.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae FF5] Length = 240 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 27/244 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL--KEISQSNL------- 51 M ++VTG AGFIG + R L +L ++V+ ID NLN E+ QS L Sbjct: 1 MTVLVTGAAGFIGFHVARRLC-ELGVEVVGID------NLNDYYSVELKQSRLAILQRLP 53 Query: 52 -FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 F+F ++DI D E + + + + +++ AA++ V S+ + + +N++G +LE Sbjct: 54 GFTFHRLDITDTEGLYTLFSQNAFEQVIHLAAQAGVRYSLEQPNVYAQSNLVGFINVLEA 113 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVL 169 R + + S+ VYG+ + F ED P S Y+ATK +++ Sbjct: 114 CRQYRPA---------HLIYASSSSVYGANTRMPFQVEDAVDRPLSLYAATKRANELTAY 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H YG+ YGP+ P+ + M+ G V +Y G+ RD+ Y++D Sbjct: 165 SYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTKAMLAGQSVDIYNHGEMARDFTYIDDI 224 Query: 230 VRAL 233 V ++ Sbjct: 225 VESI 228 >gi|291283279|ref|YP_003500097.1| GDP-mannose dehydratase Gmd [Escherichia coli O55:H7 str. CB9615] gi|18266399|gb|AAL67553.1|AF461121_4 GDP-mannose dehydratase Gmd [Escherichia coli] gi|168986305|dbj|BAG11845.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O55:H7] gi|168986364|dbj|BAG11903.1| GDP-mannose dehydratase Gmd [Escherichia coli O55:H7] gi|290763152|gb|ADD57113.1| GDP-mannose dehydratase Gmd [Escherichia coli O55:H7 str. CB9615] gi|320657460|gb|EFX25258.1| GDP-mannose 4,6-dehydratase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663276|gb|EFX30581.1| GDP-mannose 4,6-dehydratase [Escherichia coli O55:H7 str. USDA 5905] Length = 372 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSAKPNFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I L+E +PD + N A SHV S + + IGT LLE R+ L Sbjct: 65 LTDTSNITRILQEVKPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|224097148|ref|XP_002310852.1| predicted protein [Populus trichocarpa] gi|118486218|gb|ABK94951.1| unknown [Populus trichocarpa] gi|222853755|gb|EEE91302.1| predicted protein [Populus trichocarpa] Length = 368 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 22/322 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG G GS L +L+N +V + + + N + I + Sbjct: 26 LITGITGQDGSYLTEFLLNK-GYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKLHYA 84 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L PD + N AA+SHV S D G LLE R S Sbjct: 85 DLSDASSLRRWLDTINPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR---SH 141 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ + ++ Q + E++GS SE P++P SPY+A+K ++ + + + YG+ Sbjct: 142 IAATGRSHIKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGL 200 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + D+V A Sbjct: 201 YACNGILFNHESPRRGE-NFVTRKITRAVGRIKVGLQNKLFLGNLQASRDWGFAGDYVEA 259 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++++L++ + + + E ++ ++ F L K + + F RP Sbjct: 260 MWMMLQQEKPDDY--VVATEESHTVEEFLDVAFGYVGLNWKDHVVIDKRYF---RPAEVD 314 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 DSSK + +GW P+ E Sbjct: 315 NLKGDSSKTRKVLGWKPKVGFE 336 >gi|150005182|ref|YP_001299926.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|254883318|ref|ZP_05256028.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|294777791|ref|ZP_06743237.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|319642689|ref|ZP_07997335.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] gi|149933606|gb|ABR40304.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|254836111|gb|EET16420.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|294448379|gb|EFG16933.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|317385777|gb|EFV66710.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] Length = 359 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 76/356 (21%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 +++G G GS L +L+ N +I+ L +D+ ++++ Sbjct: 7 LISGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTARIEHLYLDEW--------VRDMK 58 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 Q+ L + D+ D + ++ QPD I N AA+SHV S + + +GT + Sbjct: 59 QNRLVNLHWGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVSFDVPEYTAEADAVGTLRM 118 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK + Q ST E++G + + E P+ P SPY K ++ Sbjct: 119 LEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQYGFWI 172 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 173 TKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNLNSLRD 231 Query: 223 WLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGNNERKN 256 W Y +D+V ++L+L K+ I R+ G NE K Sbjct: 232 WGYAKDYVECMWLILQHDTPEDFVIATGEYHTVREFATLAFKEAGIDLRWEGEGVNE-KG 290 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 ID G +L + PK + RP + D +K K+ +GW P++ Sbjct: 291 IDTA--TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 333 >gi|320106466|ref|YP_004182056.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319924987|gb|ADV82062.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 304 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 57/340 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTG AGFIG R++ + L + KL +G+ +L +S + DIC Sbjct: 2 VLVTGAAGFIG----RHVAHALTEAGFGVRKLLEPASGSNEALNALSSDEAYG----DIC 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + A D +V+ A V S A E ++ GT +L+ R Sbjct: 54 DRALL--ARLASGVDIVVHLAGSPSVSESFENAAECARVHLQGTICVLDACR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K R + +S+ EVYG + +E N SPY+A K ++ ++ A+ + + V+ Sbjct: 104 -KAGVRRLIYMSSAEVYGRPETDYVAETHALNARSPYAAAKIGAEAMMSAYSSAFAMDVI 162 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + + YGP P L+ A+ G V + + + VRD+++V D A V+K Sbjct: 163 IVRPFSVYGPGASPHALLCEALATTARGEEVKVR-NLRPVRDYIFVSDVADA---VVKAC 218 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI--------------ED 286 I ++ +VF +G + + S +L R + E Sbjct: 219 SIEPAAHL----------LVFNLGTM------RGTSVADLCRLVLAAFDRPGQAIEEGEQ 262 Query: 287 RPGHDRRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWY 324 RPG Y + D+ + +GW P+ ++E G+++ Y Sbjct: 263 RPGASEIYRLVSDNRCAQEGLGWTPRTSLEQGIHQMAEVY 302 >gi|289643796|ref|ZP_06475904.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289506402|gb|EFD27393.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 331 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 146/352 (41%), Gaps = 50/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ VTGG+GFIG+ + L D V+ +D T+ + + + +D+ Sbjct: 1 MRIAVTGGSGFIGAHVVDRLA-DAGHDVIALDLRTHRADPRADHRV----------LDVL 49 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + SA + + + A S+VD + + N+ GT + E R+ Sbjct: 50 NLPAVTSAFAGCE--VVFHLAGMSNVDHAFADPIRTVRLNVEGTANVCEAARV------- 100 Query: 121 DKKDQFRFLQISTDEVYGSL-----DKGLFSEDMPY---NPSSPYSATKASSDYLVLAWG 172 R L ST VYG+ D +ED+ + Y++TK +++ L+ ++ Sbjct: 101 --AGVRRVLFASTVWVYGAAGGDPDDPHPLTEDVEFALVRAGHVYTSTKIAAELLLHSYQ 158 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 TYG+ + YGP E ++ + + ++G + + GDGQ R++++V D A Sbjct: 159 QTYGVDFTILRYGIPYGPGMRDELVLARFLRKALDGEPLTIAGDGQQFRNYVFVRDLADA 218 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFE----IGFLLDALIPKSYSHTELIRFIEDRP 288 L L + +N I E + L A + + I + RP Sbjct: 219 HVLALA-------------DSARNATIALEGDERVSVLAMAQAVRDHVPGVRIEHVPARP 265 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKP 340 G R + ++ ++ +GW P G+ + V WYL + RP +L P Sbjct: 266 GDFRGRPVSNAAAEALLGWHPTTRFAEGVRQYVEWYLADR---RPTRDQLAP 314 >gi|281423267|ref|ZP_06254180.1| GDP-mannose 4,6-dehydratase [Prevotella oris F0302] gi|281402603|gb|EFB33434.1| GDP-mannose 4,6-dehydratase [Prevotella oris F0302] Length = 364 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 27/327 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ + +V + + + + + F D+ D Sbjct: 7 LITGITGQDGSYLAEFLL-EKGYEVHGTIRRSSVDYRERIAHLEGHSHFHLHYADLGDSM 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I + + QP I N AA+SHV S + + +G +LE R Sbjct: 66 SILGVIGKVQPTEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRVLEAVR------QLGLT 119 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 D R Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + + Sbjct: 120 DSCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWIVREYRDAYNMFCCSGI 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V ++L+L+ Sbjct: 180 LFNHESERRGE-TFVTRKITLAAARIKQGKQEKLYLGNLSSLRDWGYAKDYVECMWLILQ 238 Query: 239 KGRIGERYNIGGNNERKNIDIVF--------EIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + E + I + D + E+ F + + K IE P Sbjct: 239 NDK-PEDFVIATGVQHSVRDFCYYAFKRVGIELEFTGEGMDEKGIDKATGKVLIEVSPDF 297 Query: 291 DRRYAI-----DSSKIKSEIGWFPQEN 312 R + D +K K+E+GW P + Sbjct: 298 YRPTDVVNLWGDPTKAKAELGWNPSKT 324 >gi|255011097|ref|ZP_05283223.1| DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 3_1_12] gi|313148905|ref|ZP_07811098.1| NAD-dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] gi|313137672|gb|EFR55032.1| NAD-dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] Length = 342 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TGG GFIGS L ++ + ++ V+D L G+ ++L+ + F++ D Sbjct: 1 MKYLITGGCGFIGSNLAAEVLKRGE-ELFVLDNLFRYGSGSNLEWLRTKGDFTYYPYDTR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE PD I + A + + SI TN +GTF LL+ R + S Sbjct: 60 NTNDVETVIKEVHPDYIFHLAGQVAMTTSISNPRLDYETNALGTFNLLDAVRKY----SP 115 Query: 121 DKKDQFRFLQISTDEVYGSLD----------------KGLFSEDMPYNPSSPYSATKASS 164 D L ST++VYG + F E + + SPY +K + Sbjct: 116 DSV----ILYSSTNKVYGDFEYLHFREESTRYVCEEYPNGFPESISLDFHSPYGCSKGCA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH-----------FPEKLIPLAITRMIEGSHVFL 213 D +L + YG+ ++ S+ YG F +K + + + E + Sbjct: 172 DQYLLDFHRIYGLKTIVFRHSSMYGSNQHATYDQGWIGWFCQKALEIKNHTLQE--PFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 G G+ VRD L+ ED V LY K GE +NIGG E + I Sbjct: 230 SGTGKQVRDVLHGEDVVN-LYFTAKDIDKAYGEVFNIGGGIENSLSLLELFDLLENKLDI 288 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +Y+ + R + + D K +GW P+ + E+G+ + W Sbjct: 289 EMTYTQ------LPWRESDQKVFVADIEKATRILGWLPKVSKEAGIELMINW 334 >gi|323357012|ref|YP_004223408.1| nucleoside-diphosphate-sugar epimerase [Microbacterium testaceum StLB037] gi|323273383|dbj|BAJ73528.1| nucleoside-diphosphate-sugar epimerase [Microbacterium testaceum StLB037] Length = 377 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/404 (22%), Positives = 165/404 (40%), Gaps = 82/404 (20%) Query: 3 LIVTGGAGFIGSALCRYLV---------NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS 53 +++TGGAGFIGS L LV + L QV D T + L ++ +++ + Sbjct: 4 VLITGGAGFIGSRLAARLVRAGHRVRVLDALLAQVHGPDPDTTSPLLRAVSGVAEVRRGT 63 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 V E +R+AL + D +++ AAE+ +S+ D ++ NI GT L++ Sbjct: 64 VTSV-----EDLRAALVDV--DIVIHLAAETGTGQSMYEIDRYVEANIGGTAKLMD---- 112 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYG--------------------SLDKGLFS------- 146 L+ + R + S+ +YG ++ G F+ Sbjct: 113 ---LLTNEPHAVRRVVVASSRSIYGEGAYRTATGAVVYPPHRTDAAMASGDFAVRGDDGE 169 Query: 147 --------EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---P- 194 ED +PSS Y TK + L++ T G+ + N YGP P Sbjct: 170 ELELIPTPEDAALHPSSVYGITKQVQESLIMTVAPTIGVEAVSLRYQNVYGPGQSLTNPY 229 Query: 195 EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK-GRIGERYNIGGNNE 253 ++ + T + +G + ++ DG+ RD++Y++D V A +L G +N+G Sbjct: 230 TGILSIFSTLIRQGQGIDVFEDGRESRDFVYIDDVVEATFLAATSPAAAGGVFNVGSGIA 289 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +D+V + +P S T R G R D+ ++ S +G+ P+ + Sbjct: 290 TTVLDVVAALSTAFG--VPVETSITGRYRL-----GDIRHNVADTRRLSSVLGFHPEVSF 342 Query: 314 ESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSKWKNLNEMSCNR 357 G+ + V W +D +P + ++L EM+ R Sbjct: 343 TEGVRRFVDWVID------------EPVGGDTYRQSLEEMAARR 374 >gi|307822642|ref|ZP_07652873.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307736246|gb|EFO07092.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 324 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 28/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGG G +GS L+ D ++++D L+ G L +++ + + +Q DI D Sbjct: 8 ILVTGGCGLVGSTTIDLLLRDYSPASIVILDDLSR-GTLANVEAALKDPRVTLIQEDIRD 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +R A + DA+++ A + + + G+F ++E + Sbjct: 67 PEAVRRATQGM--DAVIHMAT-LRITACAANPRDAMKVMCDGSFNVVEAAQ--------- 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ +YG D ED PYN + Y A+K + L+ ++ YG+P + Sbjct: 115 AAGVKKVVAASSASIYGLADTFPTREDHHPYNNRTWYGASKIMLEGLLRSFNEMYGLPYV 174 Query: 181 LSNCSNNYGPY-----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 N YGP + E LI + R+ G+ + GDG D++Y+ED R+ L Sbjct: 175 ALRYFNVYGPRMDIHGKYTEVLIRW-MERIAAGTPPLILGDGAQTMDFVYIEDVARSNIL 233 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L+ + + +NI E D+ + ++ + + Y + + RR A Sbjct: 234 ALQAEQTDDVFNIASGTETSLNDLAITLLKVMGSDLEPEYGPERTVNPVS------RRLA 287 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D++K + + + Q ++E GL++ V W+ N Sbjct: 288 -DTTKAEQLLKFKSQIDLEDGLSQLVDWWRTN 318 >gi|258404507|ref|YP_003197249.1| NAD-dependent epimerase/dehydratase [Desulfohalobium retbaense DSM 5692] gi|257796734|gb|ACV67671.1| NAD-dependent epimerase/dehydratase [Desulfohalobium retbaense DSM 5692] Length = 318 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 41/332 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+N +V+ +D + GN ++ + + F F++ DI Sbjct: 6 LVTGGAGFLGSHLCERLLN-YGHEVICMDN-CFTGNKENIYHLMNNPRFEFMRHDITFSL 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + D I N A + L + T++ G + L K+ Sbjct: 64 YV-------EVDEIYNLACPASPIHYQLDPVQTTKTSVHGAI----------NMLGLAKR 106 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHTYG 176 + + +Q ST EVYG D + + Y NP + Y K ++ L + + Sbjct: 107 VKAKIMQASTSEVYG--DPTIHPQPESYWGNVNPIGRRACYDEGKRCAETLCFDYYRQHN 164 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 +P+ ++ N YGP Y +++ I + ++ + +YG G+ R + YV+D + + Sbjct: 165 LPIKVARIFNTYGPRMYMHDGRVVSNFIVQALQNEPITIYGQGEQTRSFCYVDDMIEGFI 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ + N+G + E F I L + ++ + S +ELI E P D + Sbjct: 225 RLMDTEDEFTGPVNLGNSGE-------FTIRELAEKVLELTGSKSELI--FEPLPEDDPK 275 Query: 294 YAIDSSKIKSE-IGWFPQENMESGLNKTVCWY 324 +K+ E +GW P+ +E GL +T+ ++ Sbjct: 276 QRKPETKLAQEKLGWEPKIGLEEGLPRTIEYF 307 >gi|254416322|ref|ZP_05030076.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] gi|196177004|gb|EDX72014.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] Length = 334 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 29/330 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + VTG G +GS + + LVN V ++ L + + +S+ + + +V+ D Sbjct: 10 VFVTGCTGLLGSWMTQELVNRGANVVGLVRDWVPQSRLFT-EGLSKKIVTVYGRVE--DI 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + L E++ D + + AA++ V +R LG E NI GT+ LLE R Sbjct: 67 ATLERTLSEYEIDTVFHLAAQTIVGVANREPLGTFE---ANIKGTWNLLEACRRVGGV-- 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 R + S+D+ YG + + E P PY +K+ +D + + +Y +PV Sbjct: 122 ------SRIVVASSDKAYGDQEILPYDETTPLQGEHPYDVSKSCADLICRTYFVSYKLPV 175 Query: 180 LLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 ++ C N YG +++P I ++ G + DG +RD+ YV+D V A L+L Sbjct: 176 CVTRCGNFYGGGDLNFNRIVPGTIRSILRGERPIIRSDGSYIRDYFYVKDGVLAYLHLAE 235 Query: 238 KKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + R GE +N + +++V +I L+D + ++ +++ H Sbjct: 236 QMERQEIWGEAFNFSNELQITVLELVEKIIGLMD----RKDLEPLILNQVKNEIIHQ--- 288 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + K + + W P+ +++ L +T+ WY Sbjct: 289 YLSAQKARRLLNWEPEYSLDEALKETIDWY 318 >gi|168986421|dbj|BAG11959.1| GDP-mannose dehydratase Gmd [Escherichia coli O55:H6] Length = 372 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSAKPNFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I L+E +PD + N A SHV S + + IGT LLE R+ L Sbjct: 65 LTDTSNITRILQEVKPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|1169830|sp|P13226|GALE_STRLI RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase Length = 329 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 148/328 (45%), Gaps = 46/328 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++LV + +V+V+ NL++ SF + DI D Sbjct: 4 KYLVTGGAGYVGSVVAQHLV-EAGNEVVVLH------NLSTGFRAGVPAGASFYRGDIRD 56 Query: 62 RECIRSALK-EFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++ +R + D +++FAA S V S++ +++ N+ GT LLE R Sbjct: 57 QDFMRKVFRGRLSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG ++ E P P++PY A+K + D+++ +G+ + Sbjct: 109 -GAGVRRLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAV 167 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYGD-----GQNVRDWLYV 226 ++ + H PE LIPL + ++ +G + +YGD VRD+++V Sbjct: 168 SVPYFNVAGANRGVRLVHDPESHLIPL-VLQVAQGRREAISVYGDDYPTPDTCVRDYIHV 226 Query: 227 EDHVRALYLVLKKGRIGERY---NIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D A L +++ R G + N+G N ++V + + IP+ Sbjct: 227 ADLAEAHLLAVRR-RPGNEHLICNLGNGNGFSVREVVETVRRVTGHPIPE---------I 276 Query: 284 IEDRPGHDRRYAIDSSKIKSE-IGWFPQ 310 + R G D + S+ E +GW P Sbjct: 277 MAPRRGRDPAVLVASAGTAREKLGWNPS 304 >gi|253578771|ref|ZP_04856042.1| GDP-mannose 4,6-dehydratase [Ruminococcus sp. 5_1_39B_FAA] gi|251849714|gb|EES77673.1| GDP-mannose 4,6-dehydratase [Ruminococcus sp. 5_1_39BFAA] Length = 350 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 19/244 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ + +V I + N + + + N+ D+ D Sbjct: 6 LITGITGQDGSYLAEFLL-EKGYEVHGIVRRASISNTARIDHLIEKNVIKLHDGDLSDSS 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR---LWWSCLSQ 120 + + E +PD I N AA+SHV S + + +G +LE R L +C Sbjct: 65 GLIRLVGEIRPDEIYNLAAQSHVQVSFDAPEYSGDVDALGVLRVLEAVRVCGLTKTC--- 121 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 + Q ST E+YG +++ E P++P SPY+ K ++V + YG+ Sbjct: 122 ------KVYQASTSELYGKVEEVPQKETTPFHPYSPYAVAKQYGFWMVKEYRDAYGMFAV 175 Query: 178 -PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALYL 235 +L ++ S G +F + I LA R+ EG L G+ ++RDW Y +D+V ++L Sbjct: 176 NGILFNHESERRGE-NFVTRKITLAAGRIAEGLQDHLELGNMDSLRDWGYAKDYVECMWL 234 Query: 236 VLKK 239 ++++ Sbjct: 235 IMQQ 238 >gi|329963997|ref|ZP_08301251.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] gi|328526420|gb|EGF53434.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] Length = 360 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 36/256 (14%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 +++G G GS L +L+ N +I+ L +D+ ++++ Sbjct: 6 LISGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTARIEHLYLDEW--------VRDMK 57 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 +S L + D+ D + +++ QPD I N AA+SHV S + + +GT + Sbjct: 58 KSRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAVGTLRM 117 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L ++K R Q ST E++G + + E P+ P SPY K ++ Sbjct: 118 LEAVRI----LGLEQKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWI 171 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 172 TKNYRESYGMYAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNLDSLRD 230 Query: 223 WLYVEDHVRALYLVLK 238 W Y +D+V ++L+L+ Sbjct: 231 WGYAKDYVECMWLILQ 246 >gi|14030703|gb|AAK53026.1|AF375442_1 AT5g59290/mnc17_180 [Arabidopsis thaliana] gi|20334716|gb|AAM16219.1| AT5g59290/mnc17_180 [Arabidopsis thaliana] Length = 342 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++++GGAGFIGS L L+ + K +V+V D + G+ +LK+ F ++ D+ Sbjct: 30 MRILISGGAGFIGSHLDDKLMENEKNEVVVADNY-FTGSKENLKKWIGHPRFELIRHDVT 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 89 EPLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 132 AKRVGARILLTSTSEVYG--DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 189 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 190 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVD 249 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ I I+ +E+ P Sbjct: 250 GLIRLMEGNDTGP-INIGNPGEFTMVELAETVKELINPSIE--------IKMVENTPDDP 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D SK K +GW P+ + GL Sbjct: 301 RQRKPDISKAKEVLGWEPKVKLREGL 326 >gi|217424220|ref|ZP_03455719.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 576] gi|217392685|gb|EEC32708.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 576] Length = 348 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 141/335 (42%), Gaps = 41/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + VL +D Y G +++ + + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVAEGH-DVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAI----------NML 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG E P + Y K ++ L + + Sbjct: 106 GLAKRLKARILQASTSEVYGDPASHPQRESYWGHVNPVGIRACYDEGKRCAETLFVDYHR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YGI + ++ N YGP P +++ I + + + + +YGDG+ R + YV+D + Sbjct: 166 QYGIDIRIARIFNTYGPRMHPADGRVVSNFIMQALADAPLTVYGDGRQTRAFCYVDDLID 225 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ G + E N+G E + I E+ + A + E D P Sbjct: 226 ALIRLMAAPGPMPEPMNLGNAEEVSMLQIAREVVRVTGASVA-----IEFRPLPADDP-- 278 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ D + +GW + GL TV +++ Sbjct: 279 -RQRCPDLGFARERLGWRATTTLADGLAATVRYFI 312 >gi|153808804|ref|ZP_01961472.1| hypothetical protein BACCAC_03104 [Bacteroides caccae ATCC 43185] gi|149128630|gb|EDM19848.1| hypothetical protein BACCAC_03104 [Bacteroides caccae ATCC 43185] Length = 392 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ + L + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 82 VRDMKKERLVNLHYGDMTDSSSLLRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 141 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 142 GTLRMLEAVRI----LGMEKKT--RIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 195 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 196 YGFWITKNYRESYGMYAVNGILFNHESERRGE-TFVTRKITLAAARIAQGLQDKLYLGNL 254 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 ++RDW Y +D+V ++L+L+ Sbjct: 255 NSLRDWGYAKDYVECMWLILQ 275 >gi|117924729|ref|YP_865346.1| GDP-mannose 4,6-dehydratase [Magnetococcus sp. MC-1] gi|117608485|gb|ABK43940.1| GDP-mannose 4,6-dehydratase [Magnetococcus sp. MC-1] Length = 369 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 148/343 (43%), Gaps = 30/343 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 R ++TG G G+ L +L+ +V I + N + + Q S F Sbjct: 11 RALITGVTGQDGAYLAEFLLQK-GYEVHGIKRRASLYNTERVDHLYQDPQVASRDFVLHY 69 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++ QPD I N AA+SHV S + + +GT +LE R+ Sbjct: 70 GDLSDSTNLIRIIQTTQPDEIYNLAAQSHVAVSFETPEYTANVDALGTLRILEAIRI--- 126 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E++G + + E P+ P SPY+ K + ++ + + YG Sbjct: 127 -LGLEKKS--RFYQASTSELFGKVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYREAYG 183 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 I +L ++ S G F + I A+ R+ G LY G+ RDW + +D+V Sbjct: 184 IFGCNGILFNHESPKRGG-TFVTRKITRAMCRIKLGMQDCLYLGNMNAKRDWGHAKDYVE 242 Query: 232 ALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEI---GFLLDALIPKSYSHTELI 281 +L+L++ GE+Y++ E ++ I G +D + S ++ Sbjct: 243 MQWLMLQQDEPVDYVIATGEQYSVRAFVEAVGKELEMSIRWQGEGIDEVGIDETSGKTVV 302 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 R RP D SK + E+GW P+ + + + V Sbjct: 303 RVNPRYFRPTEVETLLGDPSKARRELGWQPRITFQELVEEMVA 345 >gi|3721693|dbj|BAA33643.1| probable nucleotide sugar epimerase [Vibrio cholerae] Length = 334 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/350 (25%), Positives = 154/350 (44%), Gaps = 44/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA + L V+ ID + Y NL + L I LF FL+ Sbjct: 1 MKYLVTGAAGFIGSATVKKLTEQGH-HVVGIDNINDYYDVNLKHSRLARIEHP-LFHFLK 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VDI DR + ++ + + +++ AA++ V S+ + +N++G +LE R Sbjct: 59 VDIADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q+K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 115 ---QNKVGHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 IP YG + P+ + P T+ I G + + G RD+ +V+D V + Sbjct: 170 DIPTTGLRFFTVYGSWGRPD-MAPFIFTKKILAGEAIDINNHGDMWRDFTHVDDIVEGVV 228 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + ++ V I L K++ Sbjct: 229 RIADVLPTRNAAWTVESGTPATSSAPYAIYNIGHGSPINLMEFVKAIEEQLGIEANKNFR 288 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + PG + D++ + + G+ P+ + G+++ + WY D Sbjct: 289 CMQ--------PGDVYQTYADTADLFAATGYKPKVGVREGVSEFIAWYRD 330 >gi|218130782|ref|ZP_03459586.1| hypothetical protein BACEGG_02376 [Bacteroides eggerthii DSM 20697] gi|317474304|ref|ZP_07933580.1| GDP-mannose 4,6-dehydratase [Bacteroides eggerthii 1_2_48FAA] gi|217987126|gb|EEC53457.1| hypothetical protein BACEGG_02376 [Bacteroides eggerthii DSM 20697] gi|316909614|gb|EFV31292.1| GDP-mannose 4,6-dehydratase [Bacteroides eggerthii 1_2_48FAA] Length = 359 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + T+ + Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAETDAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYARDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFEEVGIPLRWEGAGI 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 K ID G +L + PK + RP + D +K K+ +GW PQ+ Sbjct: 285 NEKGIDT--RTGKVLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWNPQQT 331 >gi|300114249|ref|YP_003760824.1| GDP-mannose 4,6-dehydratase [Nitrosococcus watsonii C-113] gi|299540186|gb|ADJ28503.1| GDP-mannose 4,6-dehydratase [Nitrosococcus watsonii C-113] Length = 373 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 44/286 (15%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 63 DLTDATNLIRVIQEVQPDEIYNLAAQSHVAVSFETPEYTANADALGTLRLLEAIRIL--- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ RF Q ST E+YG + +E P+ P SPY+A K + ++ + + YG+ Sbjct: 120 ---GLEEKVRFYQASTSELYGKVQSVPQNEQTPFYPRSPYAAAKLYAYWITVNYREAYGM 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I + R+ G L+ G+ + RDW + D+V+A Sbjct: 177 YACNGILFNHESPVRGETFITRKITRGLVRIALGLQSCLHVGNLEARRDWGHARDYVKAQ 236 Query: 234 YLVLKKG-------RIGERYNIGGNNERKNIDIVFEI-GFLLD---------------AL 270 +L+L++ GE++++ R+ I+ ++ G LD A Sbjct: 237 WLMLQQSWPDDYVIATGEQHSV-----REFIEQAAQVLGLSLDWQGQGEEEIAVVRAVAG 291 Query: 271 IPKSYSHTE----LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 Y H + +IR RP D+SK + E+GW PQ Sbjct: 292 QAMEYGHIQSGDVIIRIDGRYFRPTEVETLLGDASKARRELGWAPQ 337 >gi|310780550|ref|YP_003968882.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309749873|gb|ADO84534.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 323 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 52/348 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS L+ D +V+++D L G++ + ++ F + D+ Sbjct: 1 MRVLVTGGAGYIGSHAVVELL-DGGYEVIILDNLE-TGHIELVDSRAK-----FYKADLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 ++E +R+ K+ + D ++NFAA V S+ +++ N G LLE + Sbjct: 54 EKESLRNVFKKEKIDVVMNFAAYIKVGESVTEPNKYYENNTGGVLNLLEIMK-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +F I ST VYG + L SE P +PY +K ++ ++ Y Sbjct: 106 ----EFNVKNIVFSSTAAVYGEVSGDDLVSESFDSQPINPYGMSKFMAEEIIKDSASAYN 161 Query: 177 IPVLL---SNCSNNYGPYHFPE------KLIPLAITRMI-EGSHVFLYG------DGQNV 220 + ++ N + + YH + LIP+ + E V ++G DG V Sbjct: 162 MNYVIFRYFNVAGAHEKYHIGQIGEGMTSLIPVVLEAAKGERDKVEVFGDTYSTKDGTGV 221 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 RD+++V D RA + + K + E +N+G N VFEI LDA + + Sbjct: 222 RDFIHVTDLARAHVMAINKLKKEESGLFNLGNGNGFS----VFEI---LDA--ARRVTGK 272 Query: 279 ELIRFI-EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 E+ I E RPG S K ++GW P+ N++ + WY Sbjct: 273 EIPAVISEKRPGDPACVVACSEKANEDLGWEPEYTNIDDIIKTAWNWY 320 >gi|302865263|ref|YP_003833900.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] gi|302568122|gb|ADL44324.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] Length = 328 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 52/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS + R L+ D QV V+D L G+ +L + V++ Sbjct: 1 MKLLVTGGAGYIGSVVTRMLL-DHGHQVTVLDDL-RTGHREALAPDAT-------HVELP 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E R + D +++FAA S++ + + TN +G+ L++ R Sbjct: 52 VHEAARVLTPDAGFDGVLHFAALIAAGESMIRPELYWHTNTVGSIALIDAVR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG+ + E P+S Y ATK + D + + + + + Sbjct: 104 -AARVPRMVFSSTAAVYGNPTELPIPETAVKAPTSTYGATKLAVDMALTSEAIAHDLAAV 162 Query: 181 LSNCSNNYGPY----------HFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRD 222 N G Y H PE LIP+A+ + L+G DG VRD Sbjct: 163 SLRYFNVAGAYLRDGLAIGERHDPETHLIPIALDVAAGRREKLQLFGDDYPTVDGTCVRD 222 Query: 223 WLYVEDHVRALYLVLKKGRIGER--YNIGGNN---ERKNIDIVFEIGFLLDALIPKSYSH 277 +++VED RA L L G YN+G N R+ +D+V E+ H Sbjct: 223 YIHVEDLARAHLLALDAATPGRHRIYNLGNGNGFTNRQVVDVVREV-----------TGH 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 + R G S+ + E+GW P + Sbjct: 272 PVPVEVAPRREGDPAELVASSALARDELGWTPAK 305 >gi|257091018|ref|ZP_05585379.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] gi|256999830|gb|EEU86350.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] Length = 330 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKELIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVR 221 V + + G H PE ++P+ + + + + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALSQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|220905862|ref|YP_002481173.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] gi|219862473|gb|ACL42812.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] Length = 355 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 53/356 (14%) Query: 3 LIVTGGAGFIGSALCRYLVN---DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 +++TGGAGF+GS+L LV D KI + +D L G+ +L + Q+ + F D+ Sbjct: 5 ILITGGAGFVGSSLGIGLVQRYPDWKI--IALDNLKRRGSELNLLRLKQAGI-QFYHGDV 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT-------------FI 106 + E + S FQPD I+ +AE V + TN+IGT FI Sbjct: 62 RNPEDLDSI--AFQPDLILECSAEPSVLAGYNSPGYVLQTNLIGTINCLELARQTHADFI 119 Query: 107 LLEETRLWWSCLSQD---KKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKA 162 L +R++ + + RF ++ + G ++G+ +E+ P + P S Y ATK Sbjct: 120 FLSTSRVYPLTYLNSLNFTETETRFQLLAQQPLSGVSEEGI-AEEFPLDQPRSLYGATKL 178 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-------- 214 +S+ L+ + YG+ +++ C GP+ + + + + H F Sbjct: 179 ASELLIAEYADAYGLRTIVNRCGVITGPWQMGK--VDQGVFALWMAFHYFQKSLKYIGYG 236 Query: 215 GDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNER-----KNIDIVFEIGFLL 267 G G+ VRD L++ D + + + + + G+ +N+GG + + EI + Sbjct: 237 GTGKQVRDLLHIADLLDLIDIQIHNLENLKGQTFNVGGGTSNTLSLYETTQLCQEITGIQ 296 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++P+S E R G + D+ KI + GW PQ + L W Sbjct: 297 IPIVPES----------ETRSGDVPIFITDARKIMNLTGWKPQRDATITLTDIYQW 342 >gi|289522374|ref|ZP_06439228.1| putative GDP-D-mannose dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504210|gb|EFD25374.1| putative GDP-D-mannose dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 319 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/342 (25%), Positives = 146/342 (42%), Gaps = 45/342 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF--LQVDI 59 R +TG GFIGS L + + +++ +V Y ++ ++ +D+ Sbjct: 5 RAFITGIGGFIGSHLAKKM-SEVGYEV-------YGSYFRPTSDVEMVKPYAVKTYNIDV 56 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + ++ AL+E PD + + AA+S+ S + TN++GT L E S L Sbjct: 57 RYKPHLKEALEEVDPDVVYHMAAQSYPMESFKAPSYTMETNVLGTLNLFE------SLLE 110 Query: 120 QDKKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 K R + S+ YG +D + E+ P+ P+ Y +KA+ D L + +YG+ Sbjct: 111 LGLKST-RIMLASSTAAYGFIDPSETPVKENQPFRPAHVYGVSKATQDLLGFTYFSSYGL 169 Query: 178 PVLLSNCSNNYGP---------YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ N GP + + I L +T VF G+ R +L V D Sbjct: 170 DIIRLRIGNCVGPGRKGEVVSDFTYRRAAIELGMT-----EPVFRVGNLHTKRAFLDVRD 224 Query: 229 HVRALYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V + K GR GE YN+ G ++ +DIV E G + K L+R + Sbjct: 225 AVDCFLSLEKHGRSGEAYNVSGEKPCSIKELLDIVLE-GCPVKV---KIVVDKNLVR-EK 279 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D P Y D SK+K E G+ + ++ + V W+ +N Sbjct: 280 DEP----IYWNDLSKVKDEAGFVQRFSLRQTVEDMVRWWREN 317 >gi|159474190|ref|XP_001695212.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] gi|158276146|gb|EDP01920.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] Length = 398 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 56/360 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNLFSFLQVD 58 + ++VTGGAGFIGS L+ V V+D L+ AG L +L++++ + F FL++D Sbjct: 58 LHIVVTGGAGFIGSHAAMVLMQAGH-AVTVLDNLSRGNAGALRALRDMAPARRFRFLRLD 116 Query: 59 ICDRECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + +R + AL+ +PD +++FAA ++V S+ ++ + T +L+ Sbjct: 117 LGERGALCGALQRAAPRPDLVMHFAAVAYVGESMRDPLQYYKNVTVNTVNVLD------- 169 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASS 164 C++ Q + ST VYG+ + +E P P +PY +K + Sbjct: 170 CMAAAGIKQLVY--SSTCAVYGNPESLPVTEATPPKPINPYGQSKLMAEEVIRWYARSQP 227 Query: 165 DY--LVLAWGHTYGIPVLLSNCSNNYGPYHFPE-------------KLIPLAITRMIEGS 209 D+ ++L + + YG S+ G Y PE + L + ++G+ Sbjct: 228 DFKSIILRYFNVYG-----SDPQGRLGEYPRPELRAQARISGACMDAALGLVPSLTVKGT 282 Query: 210 HVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 DG VRD+++V D + A + + YNIG + +D Sbjct: 283 K-HPTKDGTCVRDYIHVMDLIAAHVAAMAHPANPPPLYNIGTGRG-------VSVKEFVD 334 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 A + +++ E RPG D +KI +E+GW N+E GL W L++ Sbjct: 335 ACKKVTGRDIQVVYQEEARPGDYAEVWSDVAKINNELGWRANYTNIEEGLRHAWNWRLEH 394 >gi|332671104|ref|YP_004454112.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484] gi|332340142|gb|AEE46725.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484] Length = 333 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/336 (26%), Positives = 139/336 (41%), Gaps = 45/336 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +VTGGAGF+GS LC L+ D +V+ +D N + + F + D+ D Sbjct: 22 RAVVTGGAGFLGSHLCTALL-DRGAEVVCLDSFLTGSPANVAHLLGRPG-FHLQRCDLTD 79 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D +++ A+ + + E + IGT L L++D Sbjct: 80 FVHVPGPV-----DLVLHLASPASPVDYLQLPIETLKVGSIGTAHAL--------GLAKD 126 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGHT 174 K RFL ST EVYG D + + Y NP P Y K ++ + A+ T Sbjct: 127 KG--ARFLLASTSEVYG--DPQVHPQPESYWGHVNPVGPRGVYDEAKRFAEAITTAYRST 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + N YGP P + IP + + + G V + G G+ R +V+D V Sbjct: 183 HGVDTAIVRIFNTYGPRMRPRDGRAIPTFVRQALAGEPVTVAGTGEQTRSVCFVDDLVEG 242 Query: 233 LYLVLKKGRIGERYNIGGNNE----RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + + G G NIG E R D++ G S S E + D P Sbjct: 243 VLGLAASGHPGP-MNIGNPEEMTVLRIAQDVIAATG---------SSSTVEHVGRPVDDP 292 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D + ++E+GW P+ GL +TV W+ Sbjct: 293 EVRRP---DITLARTELGWEPRVAWADGLRRTVEWF 325 >gi|322388170|ref|ZP_08061774.1| UDP-glucose 4-epimerase [Streptococcus infantis ATCC 700779] gi|321140842|gb|EFX36343.1| UDP-glucose 4-epimerase [Streptococcus infantis ATCC 700779] Length = 339 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 96/359 (26%), Positives = 159/359 (44%), Gaps = 60/359 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAGFIG+ LV QV+V+D L + +L ++ I+ + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELVQ-AGHQVVVVDNLVNSSRKSLEVVERITGVEI-PFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K+ +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDYL 167 ++ + + S+ VYG ED P + ++PY TK A S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSATNPYGRTKLMLEEILTDIHKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYGD------G 217 V+ Y P+ ++ S + G P P L+P +T++ G V ++GD G Sbjct: 173 VVLL--RYFNPIG-AHESGDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDG 228 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D + LKK + G YN+G ++I+ + + IP Sbjct: 229 TGVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGRPIP-- 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT-VCWYLDNNWWWR 332 R +E RPG D +K K E+GW E+GL T +C ++ W W+ Sbjct: 287 ------YRIVERRPGDIAACYSDPAKAKEELGW------EAGLGITEMC---EDAWRWQ 330 >gi|258511530|ref|YP_003184964.1| UDP-glucose 4-epimerase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478256|gb|ACV58575.1| UDP-glucose 4-epimerase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 337 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 147/355 (41%), Gaps = 44/355 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDIC 60 ++VTG AG+IGS C LV ++ ID + +L+ +++ F VD+ Sbjct: 2 ILVTGAAGYIGSHTCVALVES-GYDIVAIDNFANS-KPEALRRVAEITGKAFPVHSVDML 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + + A+++FA V S+ + N+ T LLE S L Sbjct: 60 DAQALDEVFRAYAFQAVIHFAGLKAVGESVAQPLRYYRNNLGSTLNLLE------SMLQH 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYGI 177 K + + S+ VYG+ ++ EDMP P +PY TKA + + V +G Sbjct: 114 GVK---KIVFSSSATVYGASNEMPLKEDMPIAPVNPYGQTKAMIEQILRDVAVATEGFGA 170 Query: 178 PVLL------SNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNVRD 222 +L ++ S G P P L+P +A + + V ++G DG VRD Sbjct: 171 ALLRYFNPVGAHPSGRIGEDPQGIPNNLVPYVAQVAVGKRPEVVVFGGDYLTPDGTGVRD 230 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D HVRAL VL E +N+G ++++ IP Sbjct: 231 YIHVMDLASGHVRALDWVLSHAG-AEAFNLGTGKGSSVLEVIRAFERASGRKIP------ 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 R RPG D SK + +GW +++++ T W N + P Sbjct: 284 --YRIGPRRPGDAAVSYADPSKAEHVLGWKATQDLDAMCRDTWRWQSQNPNGYDP 336 >gi|147803491|emb|CAN64284.1| hypothetical protein VITISV_002724 [Vitis vinifera] Length = 373 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 22/322 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG G GS L +L+N +V + + + N L I S Sbjct: 31 LITGITGQDGSYLTEFLLNK-GYEVHGLIRRSSNFNTQRLNHIYIDPHNSHKARMKLHYA 89 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R + PD + N AA+SHV S D G LLE R S Sbjct: 90 DLSDASSLRRWIDTIAPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR---SH 146 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + R+ Q + E++GS SE P++P SPY+A+K ++ + + + YG+ Sbjct: 147 IMATGRSHIRYYQAGSSEMFGSTSPPQ-SETSPFHPRSPYAASKCAAHWYTVNYREAYGL 205 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + D+V A Sbjct: 206 FACNGILFNHESPRRGE-NFVTRKITRAVGRIKIGLQSKLFMGNLQASRDWGFAGDYVEA 264 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++++L++ + Y + E ++ E+ F L + + + F RP Sbjct: 265 MWMMLQQ-EXPDDYVV-ATEESHTVEEFLEVAFGSVGLNWRDHVVIDKRYF---RPAEVD 319 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 DSSK + +GW P+ + E Sbjct: 320 NLKGDSSKARKVLGWKPKVDFE 341 >gi|294085528|ref|YP_003552288.1| GDP-mannose 4,6-dehydratase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665103|gb|ADE40204.1| GDP-mannose 4,6-dehydratase [Candidatus Puniceispirillum marinum IMCC1322] Length = 372 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 30/276 (10%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + S +++ QPD I N AA+SHV S + ++ +GT +LE R+ Sbjct: 68 DMTDSSSLTSIIQKTQPDEIYNLAAQSHVAVSFEMPEYTANSDALGTLRILEAIRM---- 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E+YG + + SE P+ P SPY+ K + ++ + + YG+ Sbjct: 124 LGMEKKT--RFYQASTSELYGLVQETPQSETTPFYPRSPYAVAKLYAYWITVNYREAYGM 181 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ G LY G+ +RDW + D+V Sbjct: 182 YACNGILFNHESPIRGETFVTRKITRALARIKLGLQDCLYLGNLNAMRDWGHARDYVEMQ 241 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED------- 286 +L+L++ E + I + D V LD I + + + ++++ Sbjct: 242 WLMLQQD-TAEDFVIATGVQHSVRDFVNIAATELDMDIEWQGNGVDEVAYLKNSDHASSE 300 Query: 287 ------------RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D++K + ++GW P+ Sbjct: 301 NKPIVAIDPQYYRPTEVETLKGDATKAREKLGWIPK 336 >gi|319793712|ref|YP_004155352.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] gi|315596175|gb|ADU37241.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] Length = 372 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 41/353 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVDICD 61 +++TGGAGFIGS L L++ +V V+D L + K + D+CD Sbjct: 5 ILITGGAGFIGSHLADELLSH-GYRVRVLDNLAPQVHGEDAKRPDYLEPDVELVTGDVCD 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE------------ 109 +R+AL+ DA+ + A+ V +S+ + N +GT +L+E Sbjct: 64 PAAVRNALRGI--DAVYHLASAVGVGQSMYEVAHYTRVNNLGTAVLMEALIERPVKRLVV 121 Query: 110 --ETRLWWSCLSQDKKDQFRFLQIST------------DEVYGSLDKGLFSEDMPYNPSS 155 L+ L + + R +Q + DE +L ED +S Sbjct: 122 ASSMSLYGEGLYRTAGGELRTVQERSLEQLRRGDWEWRDEDGIALQPAPTPEDKAPALAS 181 Query: 156 PYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHV 211 Y+ +K + + L G YGIP + N YGP ++ + R++ S Sbjct: 182 VYALSKFDQERMGLMTGRAYGIPTVALRFFNAYGPRQALSNPYTGVLAIFAARLLNDSPP 241 Query: 212 FLYGDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 ++ DG RD++ V D RA L L+ GE +N+G R DI + Sbjct: 242 KIFEDGHQQRDFVSVYDIARACRLALEMPAAAGEVFNVGSGEARSVRDIAQRVA----QA 297 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + K + E+ + R G R D +K + +G+ P+ +E GL + W Sbjct: 298 VGKEHLAPEITG--KYRVGDIRHCYADIAKARKVLGYTPRVTLEDGLAELAAW 348 >gi|189466257|ref|ZP_03015042.1| hypothetical protein BACINT_02628 [Bacteroides intestinalis DSM 17393] gi|189434521|gb|EDV03506.1| hypothetical protein BACINT_02628 [Bacteroides intestinalis DSM 17393] Length = 358 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 50/310 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E+YG + + +E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGMEKKT--KIYQASTSELYGKVQEVPQTETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 RDW Y +D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDTPEDFVIATGEMHTVREFATLAFKEVGIELRWEGEGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 E K ID+ + G ++ + K + RP + D +K K+ +GW P++ Sbjct: 285 EEKGIDV--KTGKIIVEVDSKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRQT 331 Query: 313 MESGLNKTVC 322 L K + Sbjct: 332 SFEDLVKIMA 341 >gi|134098355|ref|YP_001104016.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|291006943|ref|ZP_06564916.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|133910978|emb|CAM01091.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] Length = 320 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 51/329 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C + + +V+V+D L+ G+ +++ + + F++ DI Sbjct: 1 MKLLVTGGAGYVGS-VCAARLLEAGHEVVVVDDLS-TGHADAIPDGCK-----FVEADIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L D +++FAA+S V S+ ++ N++ + LLE R Sbjct: 54 E---AAGDLLADSFDGVLHFAAKSLVGESMQEPFKYWHGNVVTSLRLLEAVR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST YG + +ED P P++ Y ATK + D+ + ++ +G+ + Sbjct: 103 -EHGTPRLVFSSTAATYGEPENVPITEDAPTRPTNTYGATKLAIDHAISSYAAAHGLAAV 161 Query: 181 ------LSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ +G H E LIP+ + + + V ++G DG VRD+++V Sbjct: 162 SLRYFNVAGAHGAFGERHTVETHLIPIVLQVALGQREQVQMFGDDWPTEDGTCVRDYIHV 221 Query: 227 EDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEI-GFLLDALIPKSYSHTEL 280 D A L L+ + G YN+G G + ++ ID ++ G + AL+ Sbjct: 222 TDLADAHLLALEHAQPGTHRVYNLGNGTGFSVKQVIDTCRKVTGHPIPALVAPR------ 275 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G S + + E+ W P Sbjct: 276 ------RAGDPATLVASSQRAREELSWEP 298 >gi|299140493|ref|ZP_07033631.1| GDP-mannose 4,6-dehydratase [Prevotella oris C735] gi|298577459|gb|EFI49327.1| GDP-mannose 4,6-dehydratase [Prevotella oris C735] Length = 364 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 27/327 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ + +V + + + + + F D+ D Sbjct: 7 LITGITGQDGSYLAEFLL-EKGYEVHGTIRRSSVDYRERIAHLEGRDNFHLHYADLGDSM 65 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I + + QP I N AA+SHV S + + +G +LE R Sbjct: 66 SILGVIGKVQPTEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRVLEAVR------QLGLT 119 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 D R Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + + Sbjct: 120 DSCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWIVREYRDAYNMFCCSGI 179 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V ++L+L+ Sbjct: 180 LFNHESERRGE-TFVTRKITLAAARIKQGKQEKLYLGNLSSLRDWGYAKDYVECMWLILQ 238 Query: 239 KGRIGERYNIGGNNERKNIDIVF--------EIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + E + I + D + E+ F + + K IE P Sbjct: 239 NDK-PEDFVIATGVQHSVRDFCYYAFKRVGIELEFTGEGMDEKGIDKATGKVLIEVSPDF 297 Query: 291 DRRYAI-----DSSKIKSEIGWFPQEN 312 R + D +K K+E+GW P + Sbjct: 298 YRPTDVVNLWGDPTKAKAELGWNPSKT 324 >gi|328957859|ref|YP_004375245.1| UDP-glucose 4-epimerase [Carnobacterium sp. 17-4] gi|328674183|gb|AEB30229.1| UDP-glucose 4-epimerase [Carnobacterium sp. 17-4] Length = 344 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 46/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+N +V+++D + + LN +KEI+ + FSF +VD Sbjct: 1 MAILVTGGAGYIGSHTTVELLN-AGHEVVIVDNFSNSKPEVLNRIKEITGKS-FSFYEVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +++ + + K +A+++FA V S+ ++ N+ TF+L E + Sbjct: 59 VLNKKELEAIFKLHDIEAVIHFAGYKAVGESVSEPLKYYHNNLTSTFVLAELMEAY---- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 KK F S+ VYG + +ED+ + ++PY TK + + V ++ Sbjct: 115 -NVKKMVFS----SSATVYGMNNISPLTEDLLLSTTNPYGTTKMMIEQILQDVYVSDPSW 169 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 I +L ++ S G P P L+P IT++ G + ++G DG Sbjct: 170 SIALLRYFNPIGAHESGRIGEDPNGIPNNLMPY-ITQVAVGKRDQLSVFGGDYDTADGTG 228 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D H++A+ VL I E YN+G +D+V +P S Sbjct: 229 VRDYIHVVDLAKGHLKAVEKVLSTEGI-EAYNLGTGIGYSVLDVVTNFEKATGENVPYSI 287 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + + RPG D+SK +E+ W + +E Sbjct: 288 T--------DRRPGDIATCYSDASKAATELSWKAEHTLE 318 >gi|313203445|ref|YP_004042102.1| nad-dependent epimerase/dehydratase [Paludibacter propionicigenes WB4] gi|312442761|gb|ADQ79117.1| NAD-dependent epimerase/dehydratase [Paludibacter propionicigenes WB4] Length = 341 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 48/357 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TGG GFIGS L ++ + ++ + D L G+ +L+ + F + DI Sbjct: 1 MRYLITGGCGFIGSNLAAEVLRRGE-ELFIFDNLFRFGSSANLEWLRNQGKFKYYPFDIR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +K+ +PD I + + + + SI N +GT+ LL+ R + Sbjct: 60 NNNDVETVIKDVKPDYIFHLSGQVAMTTSIANPRLDFEVNAMGTYNLLDAVRKY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYN----PS-----------SPYSATKASS 164 + L ST++VYG + F E D Y P+ SPY +K ++ Sbjct: 114 --SPESVILYSSTNKVYGDFENLTFDETDTRYTCREYPNGFPETISLDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH-----------FPEKLIPLAITRMIEGSHVFL 213 D +L + YG+ ++ S+ YG F +K I I + I + + Sbjct: 172 DQYLLDFHRIYGLKTIVFRHSSMYGSNQHATFDQGWVGWFCQKAIE--IQKGIANTPFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 G G+ VRD L+ D V LY K K G+ +NIGG KN + E+ LL+ ++ Sbjct: 230 SGTGKQVRDVLHGSDVVN-LYFAAKDVKDAYGQSFNIGGG--IKNSLSLLELFTLLEQVL 286 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 ++ +L R + + D++K + W + E G+ K++ W +DNN Sbjct: 287 DIKMNYIQLPW----RESDQKVFVADNTKAERLYDWKIMTSAEDGIKKSITW-IDNN 338 >gi|253583820|ref|ZP_04861018.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC 27725] gi|251834392|gb|EES62955.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC 27725] Length = 347 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 93/369 (25%), Positives = 150/369 (40%), Gaps = 73/369 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDK--------------LTYAGNLNSLKEI 46 M++++TG AGFIGS L L+ LK +++ +D L G L+ + Sbjct: 1 MKILITGAAGFIGSHLTEELLK-LKNKIIAVDNFDEFYSLDIKCRNVLESVGRKEKLESV 59 Query: 47 ----------------SQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSI 90 S + DI D+ + ++ P+ ++N A + V S+ Sbjct: 60 INLKDRDEKIAQLVVNSSDENYKLYYCDIRDKNKLEKIFEKENPEFVINLAGLAGVRPSL 119 Query: 91 LGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DM 149 E+ N+ GT +LE C K +F+Q S+ VYG+ K F E D+ Sbjct: 120 EKPLEYEEVNVRGTMNILE------ICKKLGIK---KFIQASSSSVYGNNKKAPFRETDI 170 Query: 150 PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS 209 SPY+ATK S + + + Y I + YG P+ I ++EG Sbjct: 171 VDFAISPYAATKKSCEVIGHVYHKLYNIDMFQLRFFTVYGERQRPDLAIYKFTKMILEGK 230 Query: 210 HVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 + YGDG RD+ YV+D V+ + + + KN V+EI L ++ Sbjct: 231 EIPFYGDGNTFRDYTYVKDIVQGITKSI--------------DYLKNNSDVYEILNLGES 276 Query: 270 LIPKSYSHTELIRFIEDRPG--------------HDRRYAIDSSKIKSEIGWFPQENMES 315 + S E++ IE+ G ++ YA D +K K IG+ P E Sbjct: 277 HV---VSLKEMVEVIENTLGIKVKINKLPMQMGDVEKTYA-DINKAKILIGYNPSTKFED 332 Query: 316 GLNKTVCWY 324 G+ K V W+ Sbjct: 333 GIVKFVDWF 341 >gi|254445625|ref|ZP_05059101.1| hypothetical protein VDG1235_3872 [Verrucomicrobiae bacterium DG1235] gi|198259933|gb|EDY84241.1| hypothetical protein VDG1235_3872 [Verrucomicrobiae bacterium DG1235] Length = 334 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 149/350 (42%), Gaps = 44/350 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQ 56 +R+++TG AGFIGS L + L+ V+ +D T ++ +LK S L + L+ Sbjct: 5 VRVLITGVAGFIGSNLAKRLLEG-GYDVVGVDAFTDYYSV-ALKRKSARGLVAEGVELLE 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D C DA+V+FA + + D + N++ T L+E Sbjct: 63 LDLADAACPAVTPHLENVDAVVHFAGQPGISARTPWED-YNRNNVVATHRLVE------- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA-----W 171 + + RF+ IS+ VYG + + SE P+S Y TK +++ V+ W Sbjct: 115 --AASRAGVKRFVNISSSSVYGL--RAMDSEVGEPKPASWYGETKLAAELEVMGAVRQGW 170 Query: 172 GHTYGI------PVLLSNCS----NNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNV 220 G S CS + YG PEKL P + + +G L+ G ++ Sbjct: 171 QMEDGKLRNEDGRGGFSACSLRLFSVYGERERPEKLFPRLMRAIGKGEAFPLFEGSWEHQ 230 Query: 221 RDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 R + YV D A+ L+ + GE +N+G D F G ++ + Sbjct: 231 RSFTYVGDICEAIVACLENWEKAEGEIFNVG-------TDKCFTTGEAIET-VQAIMGKE 282 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 I + RPG + KI+ +GW P+ ++ GL + V WYLD Sbjct: 283 ARIEVMPRRPGDQAATHANIEKIRRVLGWEPRTSLREGLERMVRWYLDEG 332 >gi|254443159|ref|ZP_05056635.1| UDP-glucose 4-epimerase [Verrucomicrobiae bacterium DG1235] gi|198257467|gb|EDY81775.1| UDP-glucose 4-epimerase [Verrucomicrobiae bacterium DG1235] Length = 350 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 52/352 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS R L +V+D L G+ S+ E +F Q D+ Sbjct: 21 MNVLVVGGAGYIGSHCVRQL-EVAGHTPIVLDNLV-KGHKESIPE-----GVAFHQADLA 73 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + LK+ D +++FAA V S+ + N+ T LL+ R Sbjct: 74 DSSAVVKILKDEAIDIVMHFAAFIEVAESMQDPLKHYENNVAKTISLLQSMR-------- 125 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + +F+ S+ V G K F+EDMP P S Y TKA + ++ YG+ Sbjct: 126 -EAGVNKFVFSSSCTVLGEEAKPPFTEDMPLRPISAYGQTKADVEVILDYCTKAYGMSAA 184 Query: 181 LSNCSNNYGPY--------HFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + N G H PE LIP+AI + + + ++G DG +RD++ Sbjct: 185 IFRYFNASGAAEGGVIGEDHDPETHLIPIAIQVALGQREKMLVFGDDYPTPDGTCLRDYV 244 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V+D H+ A + + G++ YN+G ++I+ + + IP + Sbjct: 245 HVDDLSRAHIAAFPQLEETGKL-LTYNLGTGTPASVLEIIKAVEEVSGKPIPYDLAP--- 300 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R D P YA DS+K KS++ W P+ + T+ +++ W W Sbjct: 301 -RRAGDVP---SAYA-DSAKAKSDLDWTPKYD-------TIRSIVESAWAWH 340 >gi|200387547|ref|ZP_03214159.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604645|gb|EDZ03190.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 373 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|220925443|ref|YP_002500745.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219950050|gb|ACL60442.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 340 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/336 (24%), Positives = 138/336 (41%), Gaps = 33/336 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GG GF+G L R L + +V V+D L Y G + +E+S+ + DI Sbjct: 1 MRIMVIGGNGFVGRPLSRLL--SAEHEVCVLDTLRYGGLRFTGEELSR---LKVVLGDIT 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +A+ F+P+AI++ AA ++ + N+ GT LL +C Sbjct: 56 DPDEVAAAVAAFRPEAIIHLAAIHYIPECEQDPGLAVRVNVAGTVNLLS------AC--- 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 RF+ S+ VY + + + PS Y TK ++ V G P + Sbjct: 107 --PPGCRFVFASSGAVYKADTRPHTEDGSAVEPSDIYGFTKLHGEHYVRYMAGLRGFPAV 164 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKG 240 + N GP L+P + ++ G G+ RD+++VED R G Sbjct: 165 VVRLFNVIGPGETNPHLMPEIVAQLKAGYSRIALGNLTPKRDYVHVEDAARGFMAAALAG 224 Query: 241 RIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + + G + ++D + + L S IR + DRP A D Sbjct: 225 EVARGACVTVNLGTSCAYSVDEIVRKLRQISGLDFAVASDPARIRAV-DRP----VLAAD 279 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 +I++ GW P ++++ L + W RP Sbjct: 280 IGRIRTLFGWEPARSIDAAL---------ADLWQRP 306 >gi|302038180|ref|YP_003798502.1| CDP-tyvelose epimerase [Candidatus Nitrospira defluvii] gi|300606244|emb|CBK42577.1| CDP-tyvelose epimerase [Candidatus Nitrospira defluvii] Length = 356 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 46/306 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA------GNLNSLKEISQSNL--FS 53 R++VTG +G IGS +C Y + + +D T A G+ + Q++L F Sbjct: 3 RMLVTGSSGLIGSEVCAYF-HGQGWSIHGVDNNTRATFFGPQGDTRWNQRRLQADLKQFR 61 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETR 112 ++DI DR+ + ++E +PD +V+ AA+ SH + + D+F TN +GT LLE TR Sbjct: 62 HHELDIRDRQGALALIQELKPDVVVHTAAQPSHDLAAKIPFDDF-DTNAVGTLNLLEATR 120 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSP-------------- 156 L F+ +ST++VYG + L +D ++ +SP Sbjct: 121 LHTPGAV--------FVHMSTNKVYGDAPNELPLVEQDKRWDYASPNDFDGITEHMRIDQ 172 Query: 157 -----YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIEG 208 + A+K ++D +V +G +G+ GP H +L + + +EG Sbjct: 173 SKHSLFGASKVAADVMVQEYGRYFGMKSCCLRGGCLTGPNHSGVELHGFLSYLVKCNLEG 232 Query: 209 SHVFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 ++G G+ VRD ++ D R ++ ++ R GE YN+GG R N ++E ++ Sbjct: 233 KRYSIFGYKGKQVRDNIHSLDVARFIHAFIENPRSGEVYNLGGG--RGNSCSIYEAFEMI 290 Query: 268 DALIPK 273 +A+ K Sbjct: 291 EAISGK 296 >gi|289435738|ref|YP_003465610.1| UDP-glucose 4-epimerase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171982|emb|CBH28528.1| UDP-glucose 4-epimerase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 328 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/336 (26%), Positives = 146/336 (43%), Gaps = 57/336 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IV GGAG+IGS LVN V+V+D L G+ ++ E ++ F Q DI Sbjct: 1 MSIIVLGGAGYIGSHAVAELVNR-GYNVVVVDNLK-TGHKEAIHEKAK-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + S + D +++FAA S V S+ +++ N+ GT ILLE Sbjct: 54 DKDFLSSVFERETVDGVMHFAASSLVGESMEEPLKYLNNNVYGTQILLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ E MP NP S Y TK + ++ YG+ Sbjct: 105 ---EQFGVKNIVFSSSAATYGEPEQVPIIESMPTNPESTYGDTKLIMEKMMKWCDKAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++++ED H+R++ L+ G +N+G + GF + ++ + S Sbjct: 222 DYVHIEDLIDAHIRSIEY-LENGGESNIFNLGSSK-----------GFSVQEILGAARSV 269 Query: 278 TELI---RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 TE + R G S K + +GW P+ Sbjct: 270 TEKTIPAEVVARRAGDPGILIASSDKARKILGWEPK 305 >gi|21536808|gb|AAM61140.1| GDP-D-mannose-4,6-dehydratase MUR1 [Arabidopsis thaliana] Length = 373 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 16/269 (5%) Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L D+ D +R + +PD + N AA+SHV S D G LLE Sbjct: 84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 143 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R + D ++ Q + E++GS SE P++P SPY+A+K ++ + + Sbjct: 144 VR----SHTIDSGRTVKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVN 198 Query: 171 WGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLY 225 + YG+ +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + Sbjct: 199 YREAYGLFACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 257 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 D+V A++L+L++ + + + E ++ ++ F L K Y + F Sbjct: 258 AGDYVEAMWLMLQQEKPDDY--VVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-- 313 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D+SK K +GW PQ E Sbjct: 314 -RPAEVDNLQGDASKAKEVLGWKPQVGFE 341 >gi|237808798|ref|YP_002893238.1| GDP-mannose 4,6-dehydratase [Tolumonas auensis DSM 9187] gi|237501059|gb|ACQ93652.1| GDP-mannose 4,6-dehydratase [Tolumonas auensis DSM 9187] Length = 371 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/362 (23%), Positives = 151/362 (41%), Gaps = 60/362 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 + ++TG G GS L +L+ +V I + + N + + I Q + ++ Sbjct: 3 KALITGITGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTSRIDHIYQDPHVTNPKLHLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E +PD + N A SHV S + + IGT LLE R Sbjct: 62 GDLTDTSNLTRILAEVKPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ + +G LY G+ ++RDW + D+V+ Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRALANIAQGLEPCLYLGNMDSLRDWGHARDYVKM 235 Query: 233 LYLVLKKGR--------------------------IGERYNIGGNNERKNIDIV------ 260 +L+L++ + I R+ G +E+ + V Sbjct: 236 QWLMLQQEQPEDFVIATGVQYSVRQFVEFAAKELGITLRFEGSGVDEKGYVAAVSGDNAP 295 Query: 261 -FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 ++G L+ A+ P+ + RP D +K K ++GW P+ +++ + + Sbjct: 296 GAKVGDLIVAVDPRYF-----------RPSEVETLLGDPTKAKEKLGWVPETTLQTMVEE 344 Query: 320 TV 321 V Sbjct: 345 MV 346 >gi|157376067|ref|YP_001474667.1| UDP-glucose 4-epimerase [Shewanella sediminis HAW-EB3] gi|157318441|gb|ABV37539.1| UDP-glucose 4-epimerase [Shewanella sediminis HAW-EB3] Length = 337 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/353 (24%), Positives = 153/353 (43%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+N + +V+++D L + LN ++ I+ ++ +F Q D Sbjct: 1 MTILVTGGAGYIGSHTVVELLNAGQ-KVVIVDNLVNSSIEALNRVESITGKSV-TFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++ ++ + Q ++++FA V S+ ++ N+ GT +L E + Sbjct: 59 VLNKALLQKVFSDHQIHSVIHFAGLKAVGESVAQPLKYYENNVTGTLVLCE-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ F +T VYG +ED P ++PY +K + ++ H Sbjct: 112 AEHGIKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEQILHDLNHADPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQN 219 Y PV ++ S G P P L+P +A + + + ++G DG Sbjct: 170 NIARLRYFNPV-GAHVSGRIGEDPNDIPNNLMPFIAQVAVGKREKLSVFGGDYPTHDGTG 228 Query: 220 VRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D H+RAL L K G + YN+G +D++ IP Sbjct: 229 VRDYIHVVDLATGHLRALEKLNTKPGLV--TYNLGTGQGYSVLDMIKAFEKACGKSIP-- 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG K K+E+GW +E N + W N Sbjct: 285 ------YQIVERRPGDIAACYAAPQKAKTELGWQATHTLEDMANSSWKWQSTN 331 >gi|322385464|ref|ZP_08059108.1| UDP-glucose 4-epimerase [Streptococcus cristatus ATCC 51100] gi|321270202|gb|EFX53118.1| UDP-glucose 4-epimerase [Streptococcus cristatus ATCC 51100] Length = 333 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLT 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 55 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMISLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G+ + +N+G + N+ IV K H Sbjct: 225 YVHPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARKVLGWQPKFDNIETIIETAWKWH 322 >gi|118595023|ref|ZP_01552370.1| GDP-mannose 4,6-dehydratase [Methylophilales bacterium HTCC2181] gi|118440801|gb|EAV47428.1| GDP-mannose 4,6-dehydratase [Methylophilales bacterium HTCC2181] Length = 360 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/326 (24%), Positives = 145/326 (44%), Gaps = 26/326 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G G+ L +L+ + V I + + + N + + Q + F D Sbjct: 6 LITGITGQDGAYLAEFLLKKDYV-VHGIKRRSSSLNTERIDHLYQDPHVDNRNFILHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +K QPD + N AA SHV S + + +GT LLE R L Sbjct: 65 LTDSSNLSRIIKHVQPDEVYNLAAMSHVAVSFESPEYTADVDGLGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + +E P+ P SPY+ K + ++V+ + YGI Sbjct: 121 GLEKKT--KFYQASTSELYGLVQEMPQTEKTPFYPRSPYAVAKLYAYWIVVNYREAYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ ++ G LY G+ +RDW + +D+V + Sbjct: 179 ACNGILFNHESPLRGETFVTRKITRALAQIKLGLQETLYLGNLDALRDWGHAKDYVEMQW 238 Query: 235 LVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED- 286 ++L++ + G +Y++ ++ +I + + K Y+ + I +++ Sbjct: 239 MMLQQEKPEDYVIATGVQYSVRDFVNAAAKELEMDISWQGNGADEKGYADDKCIVKVDEK 298 Query: 287 --RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D SK K ++GW P+ Sbjct: 299 YFRPTEVETLLGDPSKAKKKLGWTPK 324 >gi|48093461|gb|AAT40107.1| UDP-glucuronate decarboxylase 1 [Nicotiana tabacum] Length = 343 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V+D + G+ ++LK+ F ++ D+ Sbjct: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVVVVDNY-FTGSKDNLKQWIGHPRFELIRHDVT 88 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN++GT + L Sbjct: 89 EPLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVLGTM----------NMLGL 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + +D Y NP S Y K ++ L+ + Sbjct: 132 AKRTGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 189 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + I + + G R + YV D V Sbjct: 190 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRDEALTVQLPGTQTRSFCYVSDMVD 249 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E I++ + L++ + I +E+ P Sbjct: 250 GLIRLMEGDNTGP-INIGNPGEFTMIELAENVKELINPEVK--------IITVENTPDDP 300 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K IGW P+ + G+ Sbjct: 301 RQRKPDITKAKELIGWEPKIKLRDGI 326 >gi|298294214|ref|YP_003696153.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] gi|296930725|gb|ADH91534.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] Length = 309 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 42/333 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG +G+A+ R L + +V+ ID L E ++ L + D+ D Sbjct: 5 ILVTGGAGLVGNAVRRRLEAQGR-KVVAID----------LVERTREGL-PLVACDLTDI 52 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + E +AIV+ A S + + N++GT +LE R+ Sbjct: 53 HRLHAIAAEHPVEAIVHCGAHSGPMVARDNPYSMVQVNVVGTANMLELARI--------- 103 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ YG +G ED+P P+S Y +KA+S+ L+ + +G+ L Sbjct: 104 HKARRLVFCSSTSAYGDTPEGPVPEDVPLRPTSVYGGSKAASEALLWTYWRQFGVDALAI 163 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 S YGP + +I I + G + R +++VED V AL L L G Sbjct: 164 RLSWVYGPGRTTDCVIRTMIEDALAGRPTRMPFGADFHRQFIHVEDAVGALLLALDAGDT 223 Query: 243 GER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD------RRYA 295 R Y + G+ + E+G + ++P++ I PG D RR+ Sbjct: 224 PRRVYTVTGDTYLT----LGEVGDAVKRVLPQAD--------IALAPGPDPVDEVHRRF- 270 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 D S K + + P ++E+G+ W N Sbjct: 271 -DISAAKRDFSYAPAYDLETGIRSYAEWIAARN 302 >gi|172037276|ref|YP_001803777.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] gi|171698730|gb|ACB51711.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] Length = 331 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 41/327 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L N V+++D L Y G+ + ++ + + +L + D+ DR Sbjct: 8 ILVTGGAGYIGSHAVLALKN-AGYDVIILDNLIY-GHRDLVETVLEVDL---IVGDLGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ DA+++FAA ++V SI ++ N+ T LLE + S +K Sbjct: 63 SLLDDLFQQYSIDAVMHFAAFAYVGESIKEPQKYYRNNVANTLTLLEAMK----AASINK 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + ST YG +E+ P NP +PY A+K + ++ + Y + + Sbjct: 119 -----LVFSSTCATYGVAQFSPITEEHPQNPINPYGASKLMVEQILQDFSKAYDLNYVCF 173 Query: 183 NCSNNYGPY--------HFPE-KLIPLA-ITRMIEGSHVFLYG------DGQNVRDWLYV 226 N G + H PE LIPL +T + + + ++G DG +RD+++V Sbjct: 174 RYFNAAGAHPDGLLGEDHDPEPHLIPLVLLTALGKRKFISIFGRDYPTPDGTCIRDYIHV 233 Query: 227 EDHVRALYL---VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D +A L L+KG + +N+G N F I ++D I + + ++ Sbjct: 234 LDIAQAHILGLNYLQKGGKSDVFNLGNGNG-------FSIQEVIDTAIKVTQKDID-VKI 285 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + RPG K +GW P+ Sbjct: 286 SDRRPGDPPILVGSGEKAAKVLGWKPE 312 >gi|315425554|dbj|BAJ47215.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 318 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 149/328 (45%), Gaps = 44/328 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TG GF+G L YL + V +++S +I ++D+ Sbjct: 14 MKVLITGSEGFVGRHLREYLGGRGFVVV--------GADISSGADI---------RMDVT 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + ++ + +A+V+ AA + + S+ N+ G+ +LE + Sbjct: 57 DFDSVLKTFEQNRFEAVVHLAAVADIPLSMRDPHRCFKVNVYGSLNVLE---------AA 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + S+ YG+ K +ED P NP +PY +K + + + ++ +G+P+ Sbjct: 108 RRMGVRRVVVFSSANYYGAPVKLPVTEDTPPNPRTPYDYSKVALENVAWSYHRNHGVPLT 167 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL-VLKK 239 + +G Y EK++P + + + L+ G +V D +V++ A+ L ++K Sbjct: 168 VLRPWKAFGEYEPGEKMVPRFVKACLASEPIPLFNGGADVTDPYHVDNLCHAVELGLIKD 227 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFL------LDALIPKSYSHTELIRFIEDRPGHDRR 293 +GE +N+G N ++ +I L L++L P++ + ++ I Sbjct: 228 EAVGEAFNVGTGNALSVRELAEKIKQLTNSSSKLESLPPRTPAEATPMKSIP-------- 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 KI +++G+ PQ ++E GL + + Sbjct: 280 ---SIKKIATKLGYTPQVSLEQGLKRVI 304 >gi|311896884|dbj|BAJ29292.1| putative UDP-glucuronate decarboxylase [Kitasatospora setae KM-6054] Length = 346 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 135/332 (40%), Gaps = 43/332 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG AGFIGS LC L+ DL V+ ID L G L++L + ++ F F Q D R Sbjct: 29 VVTGAAGFIGSHLCERLL-DLGANVIGIDNL-LTGRLDNLSHLRSADGFRF-QADDVTRP 85 Query: 64 CIRSALKEF-----QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +F P + +++A R L + IGT LE + Sbjct: 86 FTVAGPVDFVFHLASPASPLDYA------RHPLAT---LKVGAIGTLNALE--------M 128 Query: 119 SQDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ K+ RFL ST EVYG + + P P S Y K ++ L + Sbjct: 129 AEAKR--ARFLLASTSEVYGDPLVHPQPEQYWGNVNPIGPRSVYDEAKRYAEALTSCFHR 186 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 T G + N YGP + + +P I + + G + + GDG R +V D V Sbjct: 187 TGGTRTRIVRIFNTYGPRMRADDGRAVPAFIQQALAGEPITVAGDGGQTRSLCFVADTVE 246 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L NIG +E + + EI + S S + D P Sbjct: 247 GL-LATTAAEYAGPVNIGNPHEITMLQLAEEIRTMT-----GSASAITFVPLPADDP--- 297 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 +R D + ++ + W P ++ GL +T+ W Sbjct: 298 KRRCPDITAARAHLDWEPTTHLRDGLRQTLDW 329 >gi|301058128|ref|ZP_07199180.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] gi|300447760|gb|EFK11473.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] Length = 319 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 31/336 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M++++TGGAGFIGS L +L+ + +V VID L + G L ++ +I Q++ L +D Sbjct: 1 MKILITGGAGFIGSHLAEHLLQNGD-EVFVIDNL-WTGKLANISKI-QNHERLHLVIDTI 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + + L F+ D I + AA V + E + N+ GT ++L RL +Q Sbjct: 58 LNESVMNELI-FKVDQIYHLAAAVGVRNIMDHPVETLDINVKGTEVVL---RLA----NQ 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS------PYSATKASSDYLVLAWGHT 174 KK F ST E+YG + SED + Y+ +K ++ LA+ Sbjct: 110 FKKKVF---IASTSEIYGKHVEHHLSEDDNRVMGTVKKRRWAYACSKTLDEFQALAYSDE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +PVL+ N GP + ++P + + G + ++GDG R + +V D V A Sbjct: 167 KKLPVLIGRLFNTVGPRQTGQYGMVLPNFVQSALLGKPITVFGDGTQSRSFAHVNDVVEA 226 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGH 290 + L+ + G+ +N+G N E D+ ++ + +L S + + + + PG Sbjct: 227 ITRLMGEPSAEGDIFNVGNNEEVTIKDLALKVKEMTGSL-----SEIDFVPYEKAYGPGF 281 Query: 291 D--RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + R + K+K +G+ P ++ES + + ++ Sbjct: 282 EDMERRCPNIGKLKKTVGFEPSYDLESIIQSVIDYF 317 >gi|298385324|ref|ZP_06994882.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] gi|298261465|gb|EFI04331.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] Length = 363 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 36/256 (14%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 +++G G GS L +L+ N +I+ L +D+ ++++ Sbjct: 9 LISGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTARIEHLYLDEW--------VRDMK 60 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 + L + D+ D + +++ QPD I N AA+SHV S + + IGT + Sbjct: 61 KDRLVNLHYGDMTDSSSLIRIIQQIQPDEIYNLAAQSHVKVSFDVPEYTAEADAIGTLRM 120 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK R Q ST E++G + + E P+ P SPY K ++ Sbjct: 121 LEAVRI----LGMEKKT--RIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQYGFWI 174 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 175 TKNYRESYGMYAVNGILFNHESERRGE-TFVTRKITLAAARIAQGLQDKLYLGNLNSLRD 233 Query: 223 WLYVEDHVRALYLVLK 238 W Y D+V ++L+L+ Sbjct: 234 WGYARDYVECMWLILQ 249 >gi|315501807|ref|YP_004080694.1| UDP-glucose 4-epimerase [Micromonospora sp. L5] gi|315408426|gb|ADU06543.1| UDP-glucose 4-epimerase [Micromonospora sp. L5] Length = 328 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 52/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS + R L+ D QV V+D L G+ +L + V++ Sbjct: 1 MKLLVTGGAGYIGSVVTRMLL-DHGHQVTVLDDL-RTGHREALAPDAT-------HVELP 51 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E R + D +++FAA S++ + + TN +G+ L++ R Sbjct: 52 VHEAARVLTPDAGFDGVLHFAALIAAGESMIRPELYWHTNTVGSIALIDAVR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST VYG+ + E P+S Y ATK + D + + + + + Sbjct: 104 -AARVPRMVFSSTAAVYGNPAELPIPETAVKAPTSTYGATKLAVDMALTSEAIAHDLAAV 162 Query: 181 LSNCSNNYGPY----------HFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRD 222 N G Y H PE LIP+A+ + L+G DG VRD Sbjct: 163 SLRYFNVAGAYLRDGLAIGERHDPETHLIPIALDVAAGRREKLQLFGDDYPTVDGTCVRD 222 Query: 223 WLYVEDHVRALYLVLKKGRIGER--YNIGGNN---ERKNIDIVFEIGFLLDALIPKSYSH 277 +++VED RA L L G YN+G N R+ +D+V E+ H Sbjct: 223 YIHVEDLARAHLLALDAATPGRHRIYNLGNGNGFTNRQVVDVVREV-----------TGH 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 + R G S+ + E+GW P + Sbjct: 272 PVPVEVAPRREGDPAELVASSALARDELGWTPAK 305 >gi|116250597|ref|YP_766435.1| GDP-mannose 4,6-dehydratase (GDP-d-mannose dehydratase) [Rhizobium leguminosarum bv. viciae 3841] gi|32261071|emb|CAE00222.1| putative GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. viciae 3841] gi|115255245|emb|CAK06320.1| putative GDP-mannose 4,6-dehydratase (ec 4.2.1.47) (GDP-d-mannose dehydratase) [Rhizobium leguminosarum bv. viciae 3841] Length = 372 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 ++TG G GS L +L+ V I + + N + I S++ LF D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYTVHGIKRRMSSFNTQRVDHIYQDPHSKNMLFKLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD + N A+SHV S + T+ +GT LLE R+ L Sbjct: 65 LTDTSNLIRIMQETQPDEVYNLGAQSHVAVSFESPEYTGDTDALGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GFEKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITINYRESYGLY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I ++ + +G LY G+ +RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRGLSNIAQGLEDCLYMGNLDALRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|86147974|ref|ZP_01066277.1| UDP-glucose 4-epimerase [Vibrio sp. MED222] gi|85834198|gb|EAQ52353.1| UDP-glucose 4-epimerase [Vibrio sp. MED222] Length = 337 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 93/362 (25%), Positives = 155/362 (42%), Gaps = 64/362 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M ++VTGG G+IGS ++N VL D L Y + L+ I + + F++ D Sbjct: 1 MNVLVTGGMGYIGSHTSIQMINAGMTPVL-FDNL-YNSKPSVLERIEKVSGVRPDFIEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +K+ +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKALLTETMKQHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 D + S+ VYG +ED P + ++PY +K A+ D+ Sbjct: 113 ---DADVKILVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ S G P P L+P ++++ G FL +G D Sbjct: 170 SITLL--RYFNPVG-SHPSGELGEDPSGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDAL 270 G VRD+++V D H+ AL V +K + YN+G N +D+V FE Sbjct: 226 GTGVRDYIHVMDLSDGHIAALEKVGRKDGL-HIYNLGTGNGSSVLDMVKAFE-------- 276 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 K+ + +E RPG D +K + E+GW +T+ ++ W Sbjct: 277 --KASGQAIPYKLVERRPGDIAECWADPAKAQKELGW--------NATRTLAEMTEDTWR 326 Query: 331 WR 332 W+ Sbjct: 327 WQ 328 >gi|134300966|ref|YP_001114462.1| GDP-mannose 4,6-dehydratase [Desulfotomaculum reducens MI-1] gi|134053666|gb|ABO51637.1| GDP-mannose 4,6-dehydratase [Desulfotomaculum reducens MI-1] Length = 361 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 36/287 (12%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + ++ +GT LLE R+ Sbjct: 63 DLTDATNLIRIIQEVQPDEIYNLAAQSHVAVSFESPEYTANSDALGTLRLLEAIRI---- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L KK ++ Q ST E++G + + E P+ P SPY+A K ++ + + Y I Sbjct: 119 LGLAKKT--KYYQASTSELFGKVQETPQKETTPFYPRSPYAAAKLYGYWITVNYREAYNI 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ G LY G+ + RDW + D+V+A+ Sbjct: 177 FACNGILFNHESPLRGETFVTRKITRAVARIKLGLQKKLYLGNLDSKRDWGFAGDYVKAM 236 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVF-EIGFLL-------DALIPKSYSHT 278 +L+L++ + GE Y++ R +++ F +IG + D + S + Sbjct: 237 WLMLQQDKPEDFVIATGETYSV-----RDFVELAFNQIGIQIEWRGQGVDEIGVDSGTGN 291 Query: 279 ELI----RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 L+ R+ RP D +K + ++GW+P+ + N V Sbjct: 292 VLVCVDPRYF--RPTEVDFLLGDPTKAREKLGWYPEVTINQLANMMV 336 >gi|269214246|ref|ZP_05986142.2| UDP-glucose 4-epimerase [Neisseria lactamica ATCC 23970] gi|269210235|gb|EEZ76690.1| UDP-glucose 4-epimerase [Neisseria lactamica ATCC 23970] Length = 355 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 85/372 (22%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M +++TGG GFIGS LV +++D L + A L L++I+ N+ F Q D Sbjct: 18 MTVLITGGTGFIGSHTAVSLVQS-GYDAVILDNLCNSSAAVLPRLRQITGRNI-PFYQGD 75 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ +R E + +++++FA V S+ ++ N+ G+ +L EE Sbjct: 76 IRDRQILRQIFSEHEIESVIHFAGLKAVGESVAEPMKYYGNNVYGSLVLAEE-------- 127 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVL-------A 170 + F+ + S+ VYG+ +K ++EDM P + ++PY A+KA + ++ Sbjct: 128 -MARAGVFKIVFSSSATVYGNAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPR 186 Query: 171 WGHTYGIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG--- 215 W V+L N G P P L+P I ++ G + ++G Sbjct: 187 WS------VILLRYFNPIGAHESGLIGEQPNGIPNNLLPY-ICQVASGRLPQLSVFGGDY 239 Query: 216 ---DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 DG +RD+++V D L +G I GG + +F +G Sbjct: 240 PTPDGTGMRDYIHVMD--------LAEGHIAAMKAKGGLSGVH----LFNLGS------G 281 Query: 273 KSYSHTELIRFIEDRPGHDRRYAI-------------DSSKIKSEIGWFPQENMESGLNK 319 ++YS E+IR E G + Y I D S K E GW + + Sbjct: 282 RAYSVLEIIRAFEAASGLNIPYQIQPRRVGDLACSFADPSHTKQETGWETK--------R 333 Query: 320 TVCWYLDNNWWW 331 ++ ++++W W Sbjct: 334 SLAQMMEDSWRW 345 >gi|254513045|ref|ZP_05125111.1| NAD-dependent epimerase/dehydratase [Rhodobacteraceae bacterium KLH11] gi|221533044|gb|EEE36039.1| NAD-dependent epimerase/dehydratase [Rhodobacteraceae bacterium KLH11] Length = 340 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/354 (23%), Positives = 158/354 (44%), Gaps = 56/354 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 ++++TG AGFIG L L+ + +V D +T ++ SLK+ ++L FS Sbjct: 6 KVLITGTAGFIGFHLANLLLANGN-RVHGYDGMTDYYDV-SLKQSRHAHLLETPNFSCDV 63 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D F+PD I++ AA++ V S+ ++ +N++GTF ++E R Sbjct: 64 GMLEDTSSFDHMADAFEPDVIIHLAAQAGVRYSLENPRAYVESNVVGTFNVMEAAR---- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVL 169 + + L ST +YG+ + DMP++ + Y+ATK +++ + Sbjct: 120 -----RHEVRHLLMASTSSIYGA------NPDMPFDECEKADHQLTMYAATKKANEAMGH 168 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H + +P + YGP+ P+ ++E + +Y G RD+ YVED Sbjct: 169 SYAHLWNLPTTMFRFFTVYGPWGRPDLAFFKFTDAILEDRPIDIYNHGNMYRDFTYVEDL 228 Query: 230 VRALYLVL--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDAL 270 VRA+ L++ K I E N+G +++ + +D + DA Sbjct: 229 VRAISLLIDVIPVRPAKPEDITEGDSLSPVAPYRIVNVGNSDKVRLLDFI-------DA- 280 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I KS + +++ + G ++ + G+ PQ +++ G+ V WY Sbjct: 281 IEKSLGKPAIRNYMDMQKGDVPATWANADLLHRLTGYRPQTDIKDGIQAFVDWY 334 >gi|312128906|ref|YP_003996246.1| nad-dependent epimerase/dehydratase [Leadbetterella byssophila DSM 17132] gi|311905452|gb|ADQ15893.1| NAD-dependent epimerase/dehydratase [Leadbetterella byssophila DSM 17132] Length = 323 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS LC V + V+ +D L G+L +++ + + F F Q D+ Sbjct: 3 RILITGGAGFLGSHLCDRFVKE-GYHVMAMDNLI-TGDLRNIEHLFKLPNFEFYQHDVSK 60 Query: 62 RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L I++FA+ S +D + I T +G+ + +CL Sbjct: 61 FIHVPGELH-----YILHFASPASPIDYLKIP----IQTLKVGSLGI-------HNCLGL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + R L ST EVYG +ED P P Y K + + +A+ + Sbjct: 105 ARVKNARVLIASTSEVYGDPQVHPQTEDYWGHVNPVGPRGVYDEAKRFQEAMTMAYHTYH 164 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP +++P I + + G + ++GDG R + YV+D V + Sbjct: 165 GLETRIVRIFNTYGPRMRLNDGRVLPAFIGQALRGEDLTIFGDGSQTRSFCYVDDLVEGI 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 Y +L NIG +E + EI L + T+ +D P D + Sbjct: 225 YRLLLSD-YPNPVNIGNPSEITIKEFAEEIIKL---------TGTDQKVVYKDLPKDDPK 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY--LDNNWWW 331 + D +K K +GW P+ + GL KT ++ L W+ Sbjct: 275 QRQPDITKAKEILGWEPKVDRAEGLKKTYEYFKNLPQERWF 315 >gi|227890959|ref|ZP_04008764.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] gi|227867368|gb|EEJ74789.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] Length = 320 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 154/330 (46%), Gaps = 34/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL---FSFLQVD 58 + +VTGGAGFIGS L +++ +V+V+ + +L S + +NL +F Q D Sbjct: 4 KYLVTGGAGFIGSNLIEKIISQGD-EVVVVGR-----HLPSECKEDDNNLKDNITFYQAD 57 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E + L + + D IV AA + +I E ++T+ FI E + + Sbjct: 58 VTDYEFMEQLLIKEKFDYIVLLAAVISISGTIA---EPLSTH----FINQEAILYIYEII 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++K + L S+ VYG++ EDMP + +PY+ K +S+ + + YGIP Sbjct: 111 RKNKLKVKKVLFTSSSAVYGNIADTPRREDMPVSLKNPYAIDKFASERYAMFYEKVYGIP 170 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N YGP + + + + ++ L GDG+ RD++YV D V A Sbjct: 171 TVAVRFFNVYGPRQKAQGKSAGVCAIILDCLLNDKEFKLNGDGKQTRDYMYVTDAVDATL 230 Query: 235 LVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS--HTELIRFIEDRPGHD 291 ++L+ +I GE +N+ ID++ + + K H + ++F Sbjct: 231 MLLQDPKISGEIFNVASGKSVSLIDLIAA----FEKITGKKLKIIHNKGLKF------DT 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + D +K++ + G+ P+ ESGL + V Sbjct: 281 KNSLADITKLE-KTGFLPKYTFESGLKQYV 309 >gi|149179058|ref|ZP_01857631.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Planctomyces maris DSM 8797] gi|148842098|gb|EDL56488.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Planctomyces maris DSM 8797] Length = 325 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 37/334 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS LC L+ + +V +D L+ G L +L I F+F I D Sbjct: 5 LVTGGAGFIGSHLCEQLIQQGQ-EVTAVDDLS-TGFLQNLDGIIDHPNFTFRTGSITDPV 62 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + ++ D I + AA V I TNI T +LL + Sbjct: 63 LMAEMVQGV--DTIYHLAAAVGVKLVADNPVRTIETNIYPTEVLLRHA----------VQ 110 Query: 124 DQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTYGI 177 +F ST EVYG K ++E D+ + P++ Y A+KA ++L LA+ YG+ Sbjct: 111 GGHKFFLASTSEVYGKNPKERWTEEDDLHFGPTTRPRWAYGASKAIDEFLALAYSQKYGL 170 Query: 178 PVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 V + N GP + +IP I + ++G V ++ DG VR + +V + V + Sbjct: 171 DVRIGRFFNVVGPRQVGQYGMVIPRFIDQALDGGPVVVFDDGSQVRCFGHVNEIVDCVID 230 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL------IRFIEDRP 288 L G+ YNIG + I L +A+I K ++ + ED Sbjct: 231 LTNLDAAKGQVYNIGSDEP-------VSIRGLAEAIIAKVNPDVKIEYLPYNKAYNEDFE 283 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 RR D +++ +G PQ +++ L+ + Sbjct: 284 DVQRRVP-DLGRLEQTLGRKPQVKLDAILDDIIA 316 >gi|186510910|ref|NP_190685.2| MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase [Arabidopsis thaliana] gi|82654938|sp|P93031|GMD2_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 2; AltName: Full=GDP-D-mannose dehydratase 2; Short=GMD 2 gi|1764100|gb|AAB51505.1| GDP-D-mannose-4,6-dehydratase [Arabidopsis thaliana] gi|106879167|gb|ABF82613.1| At3g51160 [Arabidopsis thaliana] gi|332645237|gb|AEE78758.1| GDP-mannose 4,6 dehydratase 2 [Arabidopsis thaliana] Length = 373 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 16/269 (5%) Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L D+ D +R + +PD + N AA+SHV S D G LLE Sbjct: 84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 143 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R + D ++ Q + E++GS SE P++P SPY+A+K ++ + + Sbjct: 144 VR----SHTIDSGRTVKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVN 198 Query: 171 WGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLY 225 + YG+ +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + Sbjct: 199 YREAYGLFACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 257 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 D+V A++L+L++ + + + E ++ ++ F L K Y + F Sbjct: 258 AGDYVEAMWLMLQQEKPDDY--VVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-- 313 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D+SK K +GW PQ E Sbjct: 314 -RPAEVDNLQGDASKAKEVLGWKPQVGFE 341 >gi|302389088|ref|YP_003824909.1| GDP-mannose 4,6-dehydratase [Thermosediminibacter oceani DSM 16646] gi|302199716|gb|ADL07286.1| GDP-mannose 4,6-dehydratase [Thermosediminibacter oceani DSM 16646] Length = 350 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 + ++TG G GS L +L+N +V I + N + + I ++ LF Sbjct: 3 KALITGITGQDGSYLTEFLLNK-GYEVHGIIRRASTFNTDRIDHIYRDPHDQEARLFLHY 61 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L++ QPD + N AA+SHV S + GT LLE R + Sbjct: 62 G-DLTDGTGLRRILEKVQPDEVYNLAAQSHVKVSFEQPEYTADVVATGTLRLLEALRDYI 120 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + RF Q + E++G+ +E P+ P SPY+ +K ++ + + + Y Sbjct: 121 KVSGR----EVRFYQAGSSEMFGASPPPQ-NEKTPFYPRSPYAVSKVAAYWYAVNYREAY 175 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ + N+ P F + I A TR+ G LY G+ RDW Y D+V Sbjct: 176 GMFICNGILFNHESPRRGETFVTRKITRAATRIKLGLQDKLYLGNLDAKRDWGYAGDYVE 235 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++L+L++ + Y I E ++ E F L L + Y + F RP Sbjct: 236 AMWLMLQQNEPDD-YVI-ATGESHSVREFLEEAFGLLGLDWRQYVEIDPRYF---RPTEV 290 Query: 292 RRYAIDSSKIKSEIGWFPQ 310 DS+K + ++GW P+ Sbjct: 291 EFLLGDSTKARQKLGWKPK 309 >gi|28199200|ref|NP_779514.1| nucleotide sugar epimerase [Xylella fastidiosa Temecula1] gi|182681930|ref|YP_001830090.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa M23] gi|28057306|gb|AAO29163.1| nucleotide sugar epimerase [Xylella fastidiosa Temecula1] gi|182632040|gb|ACB92816.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa M23] gi|307578186|gb|ADN62155.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 323 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 19/239 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQ 56 M ++VTG AGFIG+ +CR L ND V+ +D Y L + + Sbjct: 1 MTVLVTGAAGFIGAHVCRALAARND---TVVGLDNYNAYYDPQLKRDRVTALCPDVYIRT 57 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ DRE + E QPD +V+ AA++ V SI ++ +N++G +LE R Sbjct: 58 LDLTDRERCAALFNEVQPDQVVHLAAQAGVRYSIENPHAYVDSNLVGFLNVLELCR---H 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C Q + S+ VYG FSE + P S Y ATK +++ + ++ Y Sbjct: 115 CRVQ------HLVYASSSSVYGDSAIPPFSEQQRVDQPRSLYGATKVANEVMAYSYAQLY 168 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ YGP+ P+ + PL +R ++EG + ++ G+ RD+ ++ D V + Sbjct: 169 GLRATGLRFFTVYGPWGRPD-MAPLIFSRAVMEGRPIEVFNHGRMERDFTFINDIVAGV 226 >gi|83941921|ref|ZP_00954383.1| UDP-glucose 4-epimerase [Sulfitobacter sp. EE-36] gi|83847741|gb|EAP85616.1| UDP-glucose 4-epimerase [Sulfitobacter sp. EE-36] Length = 327 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 53/350 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L V + +T G +++K F+Q D+ +R Sbjct: 4 ILVTGGAGYIGSHACKALAAAGHTPVTFDNLVT--GWRDAVK------FGPFVQGDLLNR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I +A +++QP A+++FAA S V S+ + N+ G+ L+E T + C Sbjct: 56 AEIDAAFEQYQPVAVMHFAALSQVGDSMKQPGTYWRNNVEGSLNLIEAT-VAAGCK---- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E+ +P + Y A+K + + ++ + YG+ ++ Sbjct: 111 ----HFVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIEDILRDFEAAYGLQSVIF 166 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ G +H PE LIPL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEFHQPETHLIPLMLD-AIDGKRDALTIFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V D V A L L++ + +N+G ++V + + ++P + Sbjct: 226 VCDLVDAHVLGLNWLREDKGSRVFNLGTGTGFSVREVVEHSREVTNRVVPMTEG------ 279 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + RPG + S + ++E+GW P + T+ + + W W Sbjct: 280 --DRRPGDCTKLVSGSVRAETELGWRPSRS-------TLQQMITDAWRWH 320 >gi|291235428|ref|XP_002737647.1| PREDICTED: Uxs1 protein-like [Saccoglossus kowalevskii] Length = 407 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 144/342 (42%), Gaps = 37/342 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L L+ + +V V+D N + N F + D+ + Sbjct: 87 RILITGGAGFVGSHLVDRLMKEGH-EVTVVDNFFTGRKRNVEHWVGHEN-FELINHDVVE 144 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + I TN IGT + L Sbjct: 145 PLLI-------EVDQIYHLASPASPPHYMYNPIKTIKTNSIGTL----------NMLGLA 187 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R L ST EVYG + +ED P P + Y K ++ + A+ Sbjct: 188 KRVRARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRIAEAMCYAYHKQEN 247 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++ + ++G G R + YV D V L Sbjct: 248 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQNEPITIFGTGTQTRSFQYVSDLVDGL- 306 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E + E ++ A + + S + ED P +R Sbjct: 307 ISLMNSNVSSPVNLGNPEEH----TIQEFAEIIKATVSNTKSPITHVAATEDDP---QRR 359 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY---LDNNWWWRP 333 D K K + W PQ + G+N+T+ ++ L N+ +P Sbjct: 360 KPDIRKAKKLLNWEPQVPLSVGINQTIAYFSEELANSHRRKP 401 >gi|147677436|ref|YP_001211651.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146273533|dbj|BAF59282.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 312 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 27/331 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ + V +D +G L +L+ + N + +I Sbjct: 7 RILVTGGAGFLGSHLCEKLLAE-GAGVRAMDTFA-SGRLENLRPV--LNKIELVNSNIAC 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + A + D+IV+ A + + T ++G IL L + LS++ Sbjct: 63 AERVLEAAGDV--DSIVHLAFPMALR------CRPVETGVVGE-ILTGLLNLIKAALSRN 113 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + +S+ VYG+ E+ P P + A K + + + G+ +++ Sbjct: 114 AL----LVYVSSIAVYGNDKYIPMDENHPLEPVLIHGAVKLAGENFCRTMAASNGLRMVI 169 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL-VLKKG 240 ++ YGP + + + + ++G + +YGDG + R + +V D A+ L +L+ Sbjct: 170 LRVADIYGPRNSRVSVPIKFLLQAMKGEPITVYGDGSDRRTYTFVSDFCEAVVLSLLRPE 229 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSK 300 +G +NIGG+ ++ ++ K + ++ +D P R IDS K Sbjct: 230 AVGGVFNIGGDECVSMRELALKV---------KKAAGSKSPVIFQDAPAAGRTLCIDSRK 280 Query: 301 IKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 K +G+ P ++ GL T W DN ++ Sbjct: 281 AKKLLGFRPAFDLAEGLALTHRWIRDNPDYY 311 >gi|120436387|ref|YP_862073.1| VipB-like polysaccharide biosynthesis protein [Gramella forsetii KT0803] gi|117578537|emb|CAL67006.1| VipB-like polysaccharide biosynthesis protein [Gramella forsetii KT0803] Length = 332 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 32/338 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS LC L+ L +V +D G+ +L I +++ F ++ DI D Sbjct: 14 KILVTGGAGFIGSNLCETLIG-LGAKVRCLDNFA-TGHRKNLDPIIENSSFELIEGDIRD 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + A + D +++ AA V RS+ N+ G +L ++ Sbjct: 72 IDTCKMACEGI--DYVLHEAALGSVPRSLKDPKTSNDVNVSGFLNML---------IAVK 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + RF+ ++ YG +K ED P SPY+ TK ++ + +YG+ + Sbjct: 121 ESEVKRFVYAASSSTYGDSEKLPKIEDEIGKPLSPYAITKYVNELYADIFHKSYGVDSIG 180 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +G P +IP + + ++ + GDG RD+ Y+++ ++ L + Sbjct: 181 LRYFNVFGRKQDPNGAYAAVIPKFVMQFMKHESPVINGDGTYSRDFTYIDNVIQMNLLAI 240 Query: 238 KKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 G + E YN + +++ + L P+ I+ IE + G +R Sbjct: 241 VTGNPEAVNEVYNTAVGDRTDLVELTQILKKHLSEFDPE-------IKNIEVKHGPNRAG 293 Query: 295 AIDSS-----KIKSEIGWFPQENMESGLNKTVCWYLDN 327 I S K K+ + + P ++ GLN+ V WY +N Sbjct: 294 DIPHSLASVDKAKNLLDYKPTHAIDEGLNEAVKWYWEN 331 >gi|332366517|gb|EGJ44263.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1059] Length = 347 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECSV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRSGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 336 >gi|322806342|emb|CBZ03910.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 303 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 29/327 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C++ Sbjct: 54 DTNVSKIFEKE-KFDIVYHLAAQIDVQKSITNPIFDSNVNVCGTINIIN------NCVNY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPGYLPIDEKHVIMPISYYGLSKYTAEEYIRLFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + +++ ++++GDG +RD+++VED V A L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLLKKQPLYIFGDGSALRDYIFVEDIVDANIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SSGG-KERFNIG-------TGVYTSVKELAENMIDIIGLKCN-IEYAPARKGDITNSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWY 324 SK K+++ W P+ ++ GL KT+ +Y Sbjct: 275 ISKAKNKLNWIPKFGLKDGLKKTIEYY 301 >gi|290565146|gb|ADD39192.1| PerDIII [Streptomyces cacaoi subsp. cacaoi] Length = 344 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 18/273 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 R ++TG G GS L +L+ QV + + G N K+ + F+ D+ Sbjct: 4 RALITGITGQDGSYLAEHLLQQ-GYQVWGLTR----GQANPRKDRVSRLIPELQFVSGDM 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL---WWS 116 D+ + +A+ QPD I N A S V S A+ N G +LE R+ + Sbjct: 59 MDQGSLVAAVDVVQPDEIYNLGAISFVPMSWQQAELVTEVNGTGVLRMLEAVRMVSGFGR 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT-- 174 +D Q RF Q S+ E++G + + SE ++P SPY KA Y+ + + Sbjct: 119 SAGRDPSGQIRFYQASSSEMFGQVVESPQSELTSFHPRSPYGVAKAYGHYITQNYRESFG 178 Query: 175 -YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ +L N + F + I LA+ ++ G G+ VRDW + D+VRA Sbjct: 179 MYGVSGILFNHESPRRGAEFVTRKISLAVAQIKLGLQDKLALGNLDAVRDWGFAGDYVRA 238 Query: 233 LYLVLKKGRIGERYNIGG---NNERKNIDIVFE 262 ++L+L + + Y IG ++ R+ I FE Sbjct: 239 MHLMLSQDSPAD-YVIGTGRMHSVREAARIAFE 270 >gi|163797707|ref|ZP_02191655.1| nucleoside-diphosphate-sugar epimerase [alpha proteobacterium BAL199] gi|159177055|gb|EDP61618.1| nucleoside-diphosphate-sugar epimerase [alpha proteobacterium BAL199] Length = 332 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 48/330 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DIC 60 R++VTGGAG+IGS C+ L + +V+D L+ G+ + ++ + L++ DI Sbjct: 3 RILVTGGAGYIGSHACKALACTGH-EPVVLDNLSQ-GHRSLVR-------WGPLEIGDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D C+ S + +PDA+++FAA + V S+ + N+ GT LL+ R Sbjct: 54 DASCLDSVFRRHRPDAVMHFAAVASVGESVGNPGLYYRNNVGGTLNLLDAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + S+ +YGS D G ED P +PY A+K ++ ++ + +G+ + Sbjct: 106 -RNGVPTLVFSSSCAIYGSPDAGPIREDQSPKPVNPYGASKLMAERILSDFDAAHGLRSV 164 Query: 181 L--------SNCSNNYGPYHFPEK-LIPL---AITRMIEGSHVF----LYGDGQNVRDWL 224 ++ G H PE IPL A + + VF DG +RD++ Sbjct: 165 SLRYFNAGGADPEGEAGESHDPETHAIPLLLMAASGRVAQFDVFGTDYPTHDGSAIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV AL +L+ G N+G + + ++ + ++ +P+ Sbjct: 225 HVSDLATAHVSALEHLLRGGS-SMTVNLGTGSGTSVMQLIDAVERVVGRSVPR------- 276 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R RPG + S +GW P+ Sbjct: 277 -RLQPRRPGDPPILVAATDMAGSLLGWRPR 305 >gi|157164041|ref|YP_001467309.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase; GluRS) [Campylobacter concisus 13826] gi|112802024|gb|EAT99368.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) [Campylobacter concisus 13826] Length = 352 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 70/369 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAGNLNSLKEISQ 48 M+++VTG AGFIG L LV ND L + +L AG + EI Sbjct: 1 MKILVTGTAGFIGFHLANALVARGDEVVGYDVINDYYDVNLKLARLKTAGF--DVSEIDY 58 Query: 49 SNLFS--------FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN 100 L + F++ D+ D + ++ ++ + D +VN AA++ V S++ +I +N Sbjct: 59 GKLITSKMHPNLKFIKADLADEKTMKELFEKQKFDVVVNLAAQAGVRYSLINPKAYIDSN 118 Query: 101 IIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NP 153 I G +LE C + K+ + S+ VYG +E+MP+ +P Sbjct: 119 ITGFMNILE------CCRHNEIKN---LVYASSSSVYG------LNENMPFSTHEGVNHP 163 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL 213 S Y+ATK S++ + + H + +P YGP+ P+ + L + ++ + + Sbjct: 164 ISLYAATKKSNEMMAHTYSHLFNVPTTGLRFFTVYGPWGRPDMALFLFVDAALKDKTIDV 223 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIG------------------ERYNIGGNNERK 255 + G+ RD+ YV+D V+ + + + YNIG N+ + Sbjct: 224 FNYGKMKRDFTYVDDIVKGIIKCIDNPAKPNPNWDAKHPDPATSKAPFKVYNIGNNSPVE 283 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 +D + + + I K+ F+ + G D S + ++ + P + Sbjct: 284 LMDYIKAVEIKIGREIKKN--------FLPLQAGDVPATFADVSDLVADFDYKPNTKVND 335 Query: 316 GLNKTVCWY 324 G+ K V WY Sbjct: 336 GVAKFVEWY 344 >gi|227551782|ref|ZP_03981831.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] gi|227179087|gb|EEI60059.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] Length = 377 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDA-HFYEGDIR 101 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 102 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 154 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +E+ P NP +PY +K + ++ YG+ Sbjct: 155 FNVNKIVFS--STAATYGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYV 212 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 213 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 272 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G N + + +L+A + + E+ Sbjct: 273 QVEDLIAAHILALEYLKEGNESNFFNLGSNKG-------YSVKEMLEA--AREVTGKEIP 323 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 324 AEIAPRRAGDPSRLVASSEKAREILGWKPE 353 >gi|300897474|ref|ZP_07115893.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 198-1] gi|300358768|gb|EFJ74638.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 198-1] gi|317408222|gb|ADV17654.1| Gmd [Escherichia coli] Length = 373 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 + ++TG G GS L +L+ +V I + + N + + I Q L++ Sbjct: 4 KALITGITGQDGSYLAEFLLKK-GYEVHGIKRRSSLFNTDRIDHIYQDPHHRNLKLQLHY 62 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E QPD + N A SHV S + + IGT LLE R Sbjct: 63 GDLTDTSNLTRILSEVQPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 120 -LGLEKKT--RFYQASTSELYGLVQEVPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI + +G LY G+ ++RDW + +D+VR Sbjct: 177 MYACNGILFNHESPRRGETFVTRKITRAIANISQGIEKCLYLGNMDSLRDWGHAKDYVRM 236 Query: 233 LYLVLKK 239 +++L++ Sbjct: 237 QWMMLQQ 243 >gi|296169133|ref|ZP_06850790.1| NAD-dependent epimerase/dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896200|gb|EFG75863.1| NAD-dependent epimerase/dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 362 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 139/335 (41%), Gaps = 40/335 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+G+ LC L+ ++V+ +D ++ + + ++ + F+ DICD Sbjct: 31 RVLITGGAGFVGAHLCDRLLGG-GVEVVSVDDMSTS-PPGAADRLTGRPGYRFVPHDICD 88 Query: 62 RECIRSALKEFQPDAIVNFAAE-SHVD---RSILGADEFITTNIIGTFILLEETRLWWSC 117 + F D + + A+ S VD R I E + GT LE Sbjct: 89 PSVVDEVGTAF--DTVFHLASPASPVDYQRRPI----ETLRAGSAGTATALEIA------ 136 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWG 172 ++ RF+ ST EVYG + E P P S Y K ++ L A+ Sbjct: 137 ----ERAGARFVLASTSEVYGDPEVHPQPERYWGNVNPVGPRSVYDEAKRYAEALTFAYR 192 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + ++ N YGP + +++P + + + + G G R YV+D V Sbjct: 193 RLGRVDTGVARIFNTYGPGMRADDGRMVPTFCRQALRNEPLTVSGTGLQTRSLCYVDDTV 252 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA-LIPKSYSHTELIRFIEDRPG 289 L + L +G G NIG E + L A LI + T I+F Sbjct: 253 AGL-IDLARGDFGGPVNIGNPAE---------LTVLAAAELIRELAGSTSTIQFTPPAED 302 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D + + +GW P+ + +GL TV W+ Sbjct: 303 DPQRRCPDITVARERLGWQPRVDYRTGLATTVAWF 337 >gi|254463608|ref|ZP_05077023.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium HTCC2083] gi|206676042|gb|EDZ40530.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium HTCC2083] Length = 332 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 80/339 (23%), Positives = 152/339 (44%), Gaps = 46/339 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 MR+ VTGGAG+IGS C L+ VL+ID + + L+ +++++ Q D Sbjct: 1 MRIAVTGGAGYIGSHTCTLLLA-AGHDVLIIDNFNNSKSDVLDRIEKVAGVRP-RINQTD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + + + +++PDA+++FA V ++ E+ N+ G+ L + Sbjct: 59 ITQADALSAVFSDYRPDAVLHFAGLKAVGEAVENPLEYYRVNVGGSVSLFQ--------- 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT-YGI 177 + + + + S+ VYG D+ E+ P P++PY +K + ++ WG + Sbjct: 110 AMENVGCNKIVFSSSATVYGDPDQVPIVENHPLRPTNPYGQSKRYVEKILEDWGQANSNL 169 Query: 178 PVLLSNCSNNYG----------PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNV 220 + N +G P P L+P +A + + + ++G DG V Sbjct: 170 AAVNLRYFNPFGAHPTALLGENPQGIPNNLMPYVAQVATGQAAELLVFGDDYDTPDGTGV 229 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D H++AL L ++K + + N+G N + + +++A K S Sbjct: 230 RDYIHVMDLAAAHLKALDLTVRKAGV-KAINVGTGNG-------YSVMQMINAF--KRAS 279 Query: 277 HTEL-IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + E+ R ++ RPG D S +GW + +E Sbjct: 280 NREIPYRVVDRRPGDIAECVADPSFAFELLGWKSELGLE 318 >gi|30021618|ref|NP_833249.1| CDP-abequose synthase [Bacillus cereus ATCC 14579] gi|206968758|ref|ZP_03229713.1| CDP-abequose synthase [Bacillus cereus AH1134] gi|229073206|ref|ZP_04206361.1| CDP-abequose synthase [Bacillus cereus F65185] gi|229080718|ref|ZP_04213237.1| CDP-abequose synthase [Bacillus cereus Rock4-2] gi|229110930|ref|ZP_04240491.1| CDP-abequose synthase [Bacillus cereus Rock1-15] gi|229128784|ref|ZP_04257761.1| CDP-abequose synthase [Bacillus cereus BDRD-Cer4] gi|229146074|ref|ZP_04274451.1| CDP-abequose synthase [Bacillus cereus BDRD-ST24] gi|229179797|ref|ZP_04307145.1| CDP-abequose synthase [Bacillus cereus 172560W] gi|296504019|ref|YP_003665719.1| CDP-abequose synthase [Bacillus thuringiensis BMB171] gi|29897173|gb|AAP10450.1| CDP-abequose synthase [Bacillus cereus ATCC 14579] gi|206735799|gb|EDZ52957.1| CDP-abequose synthase [Bacillus cereus AH1134] gi|228603718|gb|EEK61191.1| CDP-abequose synthase [Bacillus cereus 172560W] gi|228637414|gb|EEK93867.1| CDP-abequose synthase [Bacillus cereus BDRD-ST24] gi|228654672|gb|EEL10533.1| CDP-abequose synthase [Bacillus cereus BDRD-Cer4] gi|228672511|gb|EEL27794.1| CDP-abequose synthase [Bacillus cereus Rock1-15] gi|228702656|gb|EEL55123.1| CDP-abequose synthase [Bacillus cereus Rock4-2] gi|228709894|gb|EEL61913.1| CDP-abequose synthase [Bacillus cereus F65185] gi|296325071|gb|ADH07999.1| CDP-abequose synthase [Bacillus thuringiensis BMB171] Length = 319 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 24/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + ++DI D+ Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQAKIVLFIRTPSNSWRLKDILK--YIETYEIDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TN+IGT +++ +L +C Sbjct: 65 KQVQDAIKKINPDYIFHLAAYG-VNSAHTDYIHAIETNVIGTCNIIQAAKL-VNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENNINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I R+++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGEGEEPHKIFSYIILRVLQNKDVNLTLCNQ-LRDYCYIENVIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + L L S + I R D KI Sbjct: 233 QNEIFNIGSGTIH---PLKHYVELLFKHLKTNSRPNYGA---ISSRTNERWVPEADVQKI 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ N+E G+ KTV WY +N Sbjct: 287 KNSLSWEPRINIEEGIIKTVNWYKNN 312 >gi|11500013|ref|NP_071259.1| GDP-D-mannose dehydratase (gmd-1) [Archaeoglobus fulgidus DSM 4304] Length = 412 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 30/274 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQV 57 R ++TG GF+GS L ++L+ +L +V I + + NL ++ ++ +L ++ Sbjct: 8 RALITGVTGFVGSYLAKHLI-ELGAEVYGIVRRRADWSPPQNLINMGILNDPHL-HLIEG 65 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL---- 113 D+ D C+ AL +P+ I + A+S V +S + E + N IGT LLE R+ Sbjct: 66 DLLDITCLAKALDVAEPEVIFHLGAQSFVPQSFINPVETMQINCIGTLNLLETVRIKDSD 125 Query: 114 -----------WWSCLSQDKKDQFRFLQISTDEVYGSLDK---GLFSEDMPYNPSSPYSA 159 + +S +K Q+ ++ S V+ +K E P P SPY+ Sbjct: 126 AVIVFAGSSEEYGLVISSEK--QYERIKASGRTVFPEPEKIPELPIKETNPLRPMSPYAV 183 Query: 160 TKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYG 215 +K D+L + H+YG+ ++S N+ G F I L + ++ G + G Sbjct: 184 SKVYGDHLFRNYYHSYGLKTIVSRAFNHEGAGRGKMFVTSNIALQVMKLKFGETDKIKIG 243 Query: 216 DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 + RD ++ D V+ L+ +KGR G+ YN G Sbjct: 244 NVNAFRDXSHINDIVKGYCLLAEKGRYGDVYNQG 277 >gi|302038175|ref|YP_003798497.1| putative dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] gi|300606239|emb|CBK42572.1| putative dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] Length = 336 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 44/349 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGF+GS L L+ V+ +D L G ++ + + FSF++ ++C Sbjct: 1 MRILITGGAGFLGSHLSDLLIGQGH-DVIALDNLI-TGRAENISHLIGNPKFSFVKYNVC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + Q DA+++FA+ + + + +GT L Sbjct: 59 DYLHV-----DGQLDAVMHFASPASPQDYLEMPIATLKVGALGTH----------KALGL 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAWGH 173 K RFL ST EVYG D L + Y NP Y K ++ + +A+ Sbjct: 104 AKAKGARFLLASTSEVYG--DPLLNPQPETYWGNVNPIGARGVYDEAKRFAEAMTMAYHR 161 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+ + N YGP P+ +++ I + ++G + ++GDG R + YV+D VR Sbjct: 162 YHGVDTRIVRIFNTYGPRMRPKDGRVVSNFIVQALQGKPLTVFGDGSQTRSFCYVDDLVR 221 Query: 232 ---ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH---TELI---- 281 AL +V + ER + +K+ I+ I ++ P+ + E+I Sbjct: 222 GIVALLMVKSDKSVAERTDRTKFLTQKSDAILDSIHDPVNIGNPRELTVRGIAEIILKIT 281 Query: 282 ---RFIEDRP---GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 IE+RP + D ++ KS + W P+ +E G+ K ++ Sbjct: 282 GSKSVIEERPLPADDPKVRRPDITRAKSLLDWEPKVELEDGIRKATEYF 330 >gi|145105308|gb|ABP35572.1| Gmd [Salmonella enterica subsp. enterica serovar Poona] Length = 372 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|317155031|ref|YP_004123079.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] gi|316945282|gb|ADU64333.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] Length = 335 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 41/349 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+++VTG AGFIG L R L+ +V+ +D L Y NL L + +S LF + Sbjct: 1 MKILVTGAAGFIGFHLSRALIAQGH-EVVGLDNLNDYYDVNLKKARLAILGESPLFKHVN 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + + + + + + +VN AA++ V SI +I +N++G +LE R Sbjct: 60 ISLEHDQPMSELFRAERFTHVVNLAAQAGVRYSIENPKSYIDSNVVGFLNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + S+ VYG + L + +P S Y+ATK +++ + ++ Y Sbjct: 116 -----HNGVEHLVYASSSSVYGMNTRMPLSPHEGVDHPMSLYAATKKANEMMAHSYSSLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + L ++E + ++ G+ RD+ Y++D V + Sbjct: 171 ALPTTGLRFFTVYGPWGRPDMALFLFTKNILEDKPINVFNYGKMRRDFTYIDDIVEGVVR 230 Query: 236 VLKKGRI------GER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 V+KK G++ YNIG N V E+ ++ +I + Sbjct: 231 VVKKTAAPNPDWDGDKPDPCSSTVPFRVYNIGNNQ-------VVELSRYIE-VIEEVVGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + ++ +PG D S + ++ + P +E G+ + WY D Sbjct: 283 KAIYNYLPMQPGDVPATEADVSDLVRDVDFKPNTTIEVGIRNFIDWYRD 331 >gi|228909335|ref|ZP_04073161.1| CDP-abequose synthase [Bacillus thuringiensis IBL 200] gi|228850424|gb|EEM95252.1| CDP-abequose synthase [Bacillus thuringiensis IBL 200] Length = 319 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 24/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + N+ ++ ++DI D+ Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQARIVLFIRTPSNFWRLKDIIK-NIETY-EIDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TNIIGT +++ +L +C Sbjct: 65 KQVQDAIKKVNPDYIFHLAAYG-VNSAHTDYMHAIETNIIGTCNIIQAAKL-VNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENSINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I +++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGESEEPHKIFSYIILQVLRNKDVNLTLCNQ-LRDYCYIENIIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + L L S + I R D KI Sbjct: 233 QNEIFNIGSGTIS---PLKHYVELLFKHLKTNSRPNYGA---IPSRTNERWVPEADVQKI 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ N+E G+ KTV WY +N Sbjct: 287 KNSLSWEPRINIEEGIIKTVNWYKNN 312 >gi|332293425|ref|YP_004432034.1| NAD-dependent epimerase/dehydratase [Krokinobacter diaphorus 4H-3-7-5] gi|332171511|gb|AEE20766.1| NAD-dependent epimerase/dehydratase [Krokinobacter diaphorus 4H-3-7-5] Length = 332 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 150/334 (44%), Gaps = 24/334 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS +C L+ I V +D L G+ ++L I + F+F++ DI D Sbjct: 13 KVLVTGGAGFIGSNICEVLIEHGAI-VTCLDNLA-TGHKHNLDAIMSNPNFTFIEGDIRD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +S + D +++ AA V RSI N+ G +L S+D Sbjct: 71 INVCKSGVSNC--DYVLHQAALGSVPRSIQDPATSNEVNVGGFLNML--------IASKD 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + RF+ ++ YG ED+ P SPY+ TK ++ + TYG+ + Sbjct: 121 KGVK-RFVYAASSSTYGDSQGLPKQEDIIGKPLSPYAITKYVNELYADVFHKTYGLDCIG 179 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVRAL 233 N +G P +IP +++ + GDG RD+ Y+++ ++RA+ Sbjct: 180 LRYFNVFGRKQDPNGAYAAVIPKFTKLLMDHESPVMNGDGTFSRDFTYIDNVIQMNIRAM 239 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L + + YN+ ER +++ + I + + E I+F R G Sbjct: 240 -LTENEEAMNTVYNV-AYGERTDLNELVAILKTELSQFDSEIADVE-IKFGPKRAGDVPH 296 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +S +G+ PQ +++ GL + + WY N Sbjct: 297 SLASIDRARSRVGYDPQFSIKDGLKEAMAWYWKN 330 >gi|254512471|ref|ZP_05124538.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium KLH11] gi|221536182|gb|EEE39170.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium KLH11] Length = 327 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 47/349 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAG+IGS C+ L V + +T G +++K F + D+ D Sbjct: 3 HILVTGGAGYIGSHACKALAQAGYTPVTYDNLVT--GWQDAVK------FGPFERGDLSD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + + ++QP A+++FAA S V ++ + + N+ G+ L++ + CL+ Sbjct: 55 RARLDAVFAKYQPAAVMHFAALSQVGEAMSEPGRYWSNNVTGSLNLIQAA-VDAGCLN-- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI---- 177 F+ ST YG D + E P +P + Y A+K + + ++ + YG+ Sbjct: 112 ------FVFSSTCATYGEHDNVVLDETTPQHPLNAYGASKRAIEDILRDYQAAYGLNHVI 165 Query: 178 ----PVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 V ++ G +H PE L+PL + IEG + ++G DG +RD++ Sbjct: 166 FRYFNVAGADPDAEVGEFHQPETHLVPLMLD-AIEGKRDGLTVFGTDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D V A L L++G+ +N+G + ++++ + + +P + Sbjct: 225 HVCDLVDAHVLGLNWLEQGKESRVFNLGTGSGFSVMEVIEHSKAVTNRAVPYTIG----- 279 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN-MESGLNKTVCWYLDNNW 329 R G R S + + E+GW P+ + +E+ + W+ + ++ Sbjct: 280 ---PRRAGDCTRLVSGSVRAEEELGWRPKRSTLETMITDAWRWHQNGSY 325 >gi|254486776|ref|ZP_05099981.1| UDP-glucose 4-epimerase [Roseobacter sp. GAI101] gi|214043645|gb|EEB84283.1| UDP-glucose 4-epimerase [Roseobacter sp. GAI101] Length = 327 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 59/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + D L G +++K F++ ++ +R Sbjct: 4 VLVTGGAGYIGSHACKALAA-AGFTPVTFDNLV-TGWRDAVK------FGPFVEGNLLNR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I +A ++QP A+++FAA S V S+ + N+ G+ L+E CL+ Sbjct: 56 DQIDAAFAQYQPVAVMHFAALSQVGDSMTQPGLYWRNNVEGSLNLIEAA-AEAGCLN--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E+ +P + Y A+K + + ++ + +G+ ++ Sbjct: 112 -----FVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIEDILRDFDVAHGMQSVIF 166 Query: 182 -------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ G +H PE LIPL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEFHRPETHLIPLMLD-AIDGKRDALTVFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 V D V A L L+ G+ G +N+G + GF + +I S T + Sbjct: 226 VCDLVDAHVLGLQWLLDGKGGRVFNLGTGS-----------GFSVREVITHSREVTNRAV 274 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 IE RPG + SS+ +E+GW P+ + T+ + + W W Sbjct: 275 PIIEGNRRPGDCTKLVSGSSRAVAELGWNPKRS-------TLSEMISDAWRWH 320 >gi|16761040|ref|NP_456657.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141264|ref|NP_804606.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213425535|ref|ZP_03358285.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622920|ref|ZP_03375703.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650330|ref|ZP_03380383.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|25319271|pir||AB0769 GDPmannose 4,6-dehydratase (EC 4.2.1.47) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503338|emb|CAD02472.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136890|gb|AAO68455.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 373 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|312194480|ref|YP_004014541.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] gi|311225816|gb|ADP78671.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] Length = 319 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 37/331 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ +TGGAGF+GS LC L+ D +V+ +D G +++ + + F + D+ + Sbjct: 3 RVAITGGAGFLGSHLCERLLAD-GAEVICVDNFV-TGRPENVEHLLTNRRFRLIDRDVTE 60 Query: 62 RECIRSALKEFQPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L DA+++FA+ S VD L I T ++G+ TR + L Sbjct: 61 FLHVPGPL-----DAVLHFASPASPVDYYRLP----IETLMVGS----AGTR---NALGL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 + RFL ST E YG E P P S Y K ++ L +A+ Sbjct: 105 AQAKGARFLLASTSEAYGDPKVHPQPESYWGNVNPVGPRSMYDEAKRFAEALTMAYRKAR 164 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP + + IP I++ + G + + GDG R YV+D V + Sbjct: 165 GVDTGIVRIFNTYGPRMRADDGRAIPTFISQALRGEGITVAGDGSQTRSCCYVDDLVEGI 224 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L G NIG +E +D + L + P I FI RP D Sbjct: 225 LRLLWSDLPGP-VNIGNPHELSILDTAVLVRDLCGSRAP--------ITFIP-RPVDDPT 274 Query: 294 Y-AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D + + ++GW P+ + GL +T+ W Sbjct: 275 VRQPDITIARGKLGWEPKVAVGDGLARTIEW 305 >gi|302866337|ref|YP_003834974.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] gi|302569196|gb|ADL45398.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] Length = 333 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 50/329 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 ++++VTGGAG+IGS + L+ +V+++D L+ YA NL + F ++ Sbjct: 10 LKILVTGGAGYIGSVVAHSLLASGH-EVVIVDDLSTGYADNLPT--------GVKFHEIS 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D + + F D IV+ A + V S++ + + TNI+GT LL+ R Sbjct: 61 IHDVDQAFTQRDGF--DGIVHLAGKIEVGESVVRPELYWQTNIVGTLNLLDFAR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RF+ ST +Y S +E P+SPY+ +K D ++ + +G+ Sbjct: 113 ---RARISRFVFSSTCSMYDSSGMAPLTETTAVRPASPYAHSKHMVDTVLESEARAHGLA 169 Query: 179 VL------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDW 223 + + + G H PE LIP+ + ++ G H+ LYG DG VRD+ Sbjct: 170 AVSLRYANAAGAVDRLGERHEPESHLIPI-VLQVAAGRRPHLMLYGTDYPTPDGTCVRDY 228 Query: 224 LYVEDHVRALYLVLKKGRI--GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++V D A L L+ E YN+G N N++++ + IP Sbjct: 229 IHVSDLAAAHLLALQHAVPYQHEIYNLGNGNGFSNLEVIETARAVTGHPIPV-------- 280 Query: 282 RFIEDRPGHDRRYAIDSS-KIKSEIGWFP 309 + DR D ++ SS K ++ +GW P Sbjct: 281 -HVADRRAGDAVVSVASSEKARTRLGWVP 308 >gi|148976918|ref|ZP_01813573.1| capsular polysaccharide biosynthesis protein [Vibrionales bacterium SWAT-3] gi|145963792|gb|EDK29052.1| capsular polysaccharide biosynthesis protein [Vibrionales bacterium SWAT-3] Length = 334 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA+ L+ QV+ +D L A L I +N F ++ Sbjct: 1 MKYLVTGAAGFIGSAVIDKLITQGH-QVVGVDNLNDYYDVALKEARLARIQHAN-FRLVR 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR+ + S + D +++ AA++ V SI + +N+IG +LE Sbjct: 59 LDIADRDGVTSLFEAEHFDQVIHLAAQAGVRYSIENPHAYADSNLIGHLNILE------G 112 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 113 CRHNKVK---HLVYASSSSVYGLNTKTPFATSDSVDHPISLYAATKKSNELMAHSYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 IP YG + P+ + P T+ I +G + + +G RD+ +V D V + Sbjct: 170 DIPTTGLRFFTVYGSWGRPD-MAPFIFTKKILDGDTIDINNNGDMWRDFTHVNDIVEGVV 228 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + +D V I L K+ Sbjct: 229 RIADVVPTRDNEWTVEAGTPATSSSPYAVYNIGHGSPINLMDFVKAIEDELGMEAKKN-- 286 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 F E + G + D+ + + G+ P+ +++ G+ + + WY Sbjct: 287 ------FREMQSGDVYQTYADTQDLFTATGYTPKVSVKEGVAEFIQWY 328 >gi|28373938|pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp-Rhamnose. gi|28373939|pdb|1N7G|B Chain B, Crystal Structure Of The Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp-Rhamnose. gi|28373940|pdb|1N7G|C Chain C, Crystal Structure Of The Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp-Rhamnose. gi|28373941|pdb|1N7G|D Chain D, Crystal Structure Of The Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp-Rhamnose. gi|28373942|pdb|1N7H|A Chain A, Crystal Structure Of Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp gi|28373943|pdb|1N7H|B Chain B, Crystal Structure Of Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp Length = 381 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 16/269 (5%) Query: 51 LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEE 110 L D+ D +R + +PD + N AA+SHV S D G LLE Sbjct: 84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 143 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R + D ++ Q + E++GS SE P++P SPY+A+K ++ + + Sbjct: 144 VR----SHTIDSGRTVKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVN 198 Query: 171 WGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLY 225 + YG+ +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + Sbjct: 199 YREAYGLFACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 257 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 D+V A++L+L++ + + + E ++ ++ F L K Y + F Sbjct: 258 AGDYVEAMWLMLQQEKPDDY--VVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-- 313 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D+SK K +GW PQ E Sbjct: 314 -RPAEVDNLQGDASKAKEVLGWKPQVGFE 341 >gi|295131926|ref|YP_003582602.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [Zunongwangia profunda SM-A87] gi|294979941|gb|ADF50406.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [Zunongwangia profunda SM-A87] Length = 329 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 150/351 (42%), Gaps = 37/351 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TG AGF+GS LC +++ +V+ +D L G++ +++ + ++ F F D+ Sbjct: 5 VLITGAAGFLGSHLCDKFISE-GFRVIGMDNLI-TGDIRNIEHLFKNKDFEFYNHDVTKF 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + L D I++FA+ + + + + +GT +CL K Sbjct: 63 IHVPGKL-----DYILHFASPASPIDYLKIPIQTLKVGSLGT----------HNCLGLAK 107 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHTYGI 177 + R L ST E+YG SED N P Y K + L +A+ +G+ Sbjct: 108 EKGARILIASTSEIYGDPLVHPQSEDYYGNVSTIGPRGVYDEAKRFQESLTMAYHRFHGL 167 Query: 178 PVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP ++IP I + + G H+ ++GDG R + YV+D V +Y Sbjct: 168 ETRIVRIFNTYGPRMRLNDGRVIPAFIGQALRGEHLSVFGDGLQTRSFCYVDDQVEGIYR 227 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L + E NIG +E D EI L Y ++ +P Sbjct: 228 LLFSEYV-EPVNIGNPDELTIKDFAEEIIKLTGTNQKIVYRELPKDDPLQRQP------- 279 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDNDYSK 346 D ++ K +GW P+ + E G+ T ++ N L K K D+SK Sbjct: 280 -DITRAKEILGWEPKVSREEGMKITYNYF--KNLSKEDLLK--KEHKDFSK 325 >gi|294793488|ref|ZP_06758625.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|294455058|gb|EFG23430.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 329 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 93/368 (25%), Positives = 155/368 (42%), Gaps = 61/368 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS R L +++D L+ G++ S+ E F +DI Sbjct: 1 MNILVTGGAGYIGSHTVRAL-QQAGYTPIIVDNLS-RGHVESIPE-----GVKFYNMDIA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +KE +++FAA S V S+ + N++G++ L+E R Sbjct: 54 DPKLV-GIMKEHNILGVMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIK--- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 F+ ST V+G ED P++ Y TK + ++ + YG + Sbjct: 110 ------HFVFSSTAAVHGEPKVVPIREDAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYV 163 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + H+ ++G DG VRD++ Sbjct: 164 ALRYFNAAGADPSGMIGEDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D A L L+KG + +N+G N GF + +I + T + Sbjct: 224 HVNDLATAHVLAMDYLRKGGESQVFNLGSGN-----------GFSVKEIIETAKEVTGID 272 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKEL 338 +++ + R G S KIK+ +GW P+ + V + + W W + Sbjct: 273 IPVQYGDRRAGDPGTLIASSEKIKNLLGWDPKFS-------NVADVIKDAWHWHTSH--- 322 Query: 339 KPDNDYSK 346 PD SK Sbjct: 323 -PDGFSSK 329 >gi|187880464|gb|ACD36986.1| Gmd [Shigella dysenteriae] gi|187880477|gb|ACD36998.1| Gmd [Escherichia coli] gi|320172643|gb|EFW47878.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae CDC 74-1112] Length = 372 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + ++TG G GS L +L+ D +V I + + N + I Q N FL Sbjct: 3 KALITGITGQDGSYLAEFLL-DKGYEVHGIKRRASSFNTERVDHIYQDRHNQNPNFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD + N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLIRLIKEIQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + K RF Q ST E++G + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 CGLEKKT---RFYQASTSELFGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI + +G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANISQGIEKCLYLGNMDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|218961751|ref|YP_001741526.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Candidatus Cloacamonas acidaminovorans] gi|167730408|emb|CAO81320.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Candidatus Cloacamonas acidaminovorans] Length = 310 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 38/334 (11%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M+++VTGGAGFIGS + YL +V+++D L GN ++ + F ++DI Sbjct: 1 MKILVTGGAGFIGSNVADAYL--QAGHEVVIVDNLV-TGNRRNINPKA-----IFYEMDI 52 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD E + + +PD + + +A+ V SI + N+ G +L+ +C+ Sbjct: 53 CD-ESLSEVFAKEKPDMVNHHSAQISVPLSIENPLLDVINNVYGWVNVLQ------NCVR 105 Query: 120 QDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + + IS+ +YG ++ SE P S Y+ K+ + + + H YG+ Sbjct: 106 TGVK---KVIYISSGGAIYGEAEEYPTSEKYNPKPLSIYAINKSVGEDYLYFYRHQYGLN 162 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLY-----GDGQNVRDWLYVEDHV 230 + +N YGP + ++ L ++++G +Y DG +RD++YV D V Sbjct: 163 YTVLRYANVYGPRQISQGEAGVVSLFTEKLLKGEIPTVYRYDNEPDGM-IRDYVYVGDVV 221 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 +A L L++G GE +NIG + D+ + I L Y R G Sbjct: 222 QANLLALERGE-GEVFNIGTSIPTTTKDLYYAIAKQLGINREPYYGPA--------RKGD 272 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R + K K +GW P+ + G+++ + ++ Sbjct: 273 LHRSLLSCEKAKKVLGWKPETGLSEGISQVIKYF 306 >gi|294784373|ref|ZP_06749664.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_27] gi|294487945|gb|EFG35300.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_27] Length = 329 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 41/328 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVVDSLI-TGHVDAVDEKAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 HNVDKIVFS--STAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIGERYNIG--GNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 +V D A YL L + R GE I GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRNGEDSQIFNLGNGEGFSVKEVIEV-------TRKVTGHPIPAE 277 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K E+ W P+ Sbjct: 278 VSPRRAGDPARLIASSKKAIDELKWKPK 305 >gi|78222643|ref|YP_384390.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens GS-15] gi|78193898|gb|ABB31665.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens GS-15] Length = 313 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 40/334 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC LV+D +VL +D + G+ ++ + + F ++ DI Sbjct: 1 MRVLVTGGAGFIGSHLCERLVSDGH-EVLCVDNF-FTGSKQNILPLLGNPRFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L E D I + A + + I T+++GT + L Sbjct: 59 E-----PILLEV--DQIYHLACPASPVHYQYNPVKTIKTSVMGTI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ + R L ST EVYG D + + Y NP S Y K ++ L++ + Sbjct: 102 AKRVRARILLASTSEVYG--DPQVHPQPETYWGNVNPIGIRSCYDEGKRVAETLMMDYHR 159 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ + + N +GP +++ I + ++G + +YGDG R + YV D V Sbjct: 160 QNGVDIRIVRIFNTFGPRMAEHDGRVVSNFIVQALKGEDITVYGDGSQTRSFCYVSDLVE 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + N+G E ++ I I + S ++++ P D Sbjct: 220 GLVRTMSCEGFTGPVNLGNPGETTILEFARRI-------IALTGSQSQIV--FRPLPSDD 270 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D + ++ +GW P +E+GL KTV ++ Sbjct: 271 PKQRQPDITLARTTLGWEPIVPLETGLTKTVDYF 304 >gi|314937479|ref|ZP_07844812.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|314942138|ref|ZP_07848992.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|314947522|ref|ZP_07850937.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] gi|314951509|ref|ZP_07854558.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|314992599|ref|ZP_07858017.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|314995466|ref|ZP_07860566.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313590300|gb|EFR69145.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313592891|gb|EFR71736.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|313596349|gb|EFR75194.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|313599061|gb|EFR77906.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|313643120|gb|EFS07700.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|313646072|gb|EFS10652.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] Length = 377 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDA-HFYEGDIR 101 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 102 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 154 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +ED P NP +PY +K + ++ YG+ Sbjct: 155 FNVNKIVFS--STAATYGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYV 212 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 213 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 272 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G + + + +L+A + + E+ Sbjct: 273 QVEDLIAAHILALEYLKEGNESNFFNLGSSKG-------YSVKEMLEA--AREVTGKEIP 323 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 324 AEIAPRRAGDPSRLVASSEKAREILGWKPE 353 >gi|205353252|ref|YP_002227053.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273033|emb|CAR37981.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 373 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|54401428|gb|AAV34512.1| GDP-mannose dehydratase [Salmonella enterica subsp. enterica serovar Urbana] Length = 372 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|89096331|ref|ZP_01169224.1| NAD-dependent epimerase/dehydratase [Bacillus sp. NRRL B-14911] gi|89089185|gb|EAR68293.1| NAD-dependent epimerase/dehydratase [Bacillus sp. NRRL B-14911] Length = 335 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 29/332 (8%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQVD 58 + +TG AGFIG L + L+ + + VL +D + Y +L + L+ ++ + F F + Sbjct: 8 IFITGCAGFIGFHLSKKLL-EKGLPVLGLDTINDYYDQDLKYSRLQLLNNYSGFYFTKGS 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+ + S + +P +V+ AA++ V S+L +I +N+ G +LE C Sbjct: 67 LEDQRLLESLFTQHEPRIVVHLAAQAGVRYSLLNPHAYIQSNVTGFMNILE-------CC 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K D L S+ VYG+ FS ED P S Y+ATK +++ + + H Y + Sbjct: 120 RKYKIDHL--LYASSSSVYGNNKTIPFSVEDRTDEPVSLYAATKKANELMAYTYSHLYKV 177 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 P YGP+ P+ ++++ + +Y G RD+ YV+D +++ ++ Sbjct: 178 PATGLRFFTVYGPWGRPDMAYFRFAEKIVKKEPIEVYNYGNMKRDFTYVDDVTESIWRLM 237 Query: 238 ----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGHDR 292 +K YNIG + + +++ I L D L IP + F +PG + Sbjct: 238 ERRPEKSLPFSIYNIGNS---QPVELKEFIRVLEDKLGIP------AIKIFKPMQPGDVQ 288 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ I + P ++ GL K W+ Sbjct: 289 ETYAKVDDLEKLINYKPVTTIDEGLEKFADWF 320 >gi|324993069|gb|EGC24989.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK405] gi|324995625|gb|EGC27537.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK678] gi|327461333|gb|EGF07664.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1] gi|327473972|gb|EGF19385.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK408] gi|327489193|gb|EGF20986.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1058] Length = 333 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 150/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLIAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 55 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G+ + +N+G + N+ IV + K H Sbjct: 225 YVHPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EVARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARKILGWQPKFDNIETIIETAWKWH 322 >gi|298675165|ref|YP_003726915.1| NAD-dependent epimerase/dehydratase [Methanohalobium evestigatum Z-7303] gi|298288153|gb|ADI74119.1| NAD-dependent epimerase/dehydratase [Methanohalobium evestigatum Z-7303] Length = 351 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 99/366 (27%), Positives = 161/366 (43%), Gaps = 63/366 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL----------NSLK---- 44 M++++TG AGFIG L + LVN + +++ +D + Y NL NS K Sbjct: 1 MKILITGTAGFIGFHLVKKLVNS-EHEIIGLDNINDYYDVNLKYGRLEETGINSKKIEYN 59 Query: 45 EISQSNLF---SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 + QS+L+ SF+++++ D+E I+ + + + + AA++ V SI +I +NI Sbjct: 60 KFVQSDLYPNYSFIKLNLEDKENIKFLFENEKFVVVCHLAAQAGVRYSITHPYSYIQSNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSAT 160 +G +LE SC + K + S+ VYG K FS +D +P S Y+++ Sbjct: 120 VGFLNILE------SCRYNNIK---HLVYASSSSVYGLNKKMPFSTQDNVDHPISLYASS 170 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI---EGSHVFLYGDG 217 K S++ + + + Y IP YGP+ P+ + T+ I +V+ YGD Sbjct: 171 KKSNELMAHTYSYLYNIPTTGLRFFTVYGPWGRPD-MAYFKFTKSILDDRPINVYNYGDM 229 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRI-------GER------------YNIGGNNERKNID 258 Q RD+ YV+D V L +L GE+ YNIG NN ID Sbjct: 230 Q--RDFTYVDDVVDGLIKILDNEPPSGNSDWSGEKPDPSSSTAPYRVYNIGNNNPVNLID 287 Query: 259 IVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 + I K+Y + PG D + + + P +E G+ Sbjct: 288 FINAIEKATGKEAKKNYKPLQ--------PGDVISTWADIDNLIKDFNYEPNTPVEKGIK 339 Query: 319 KTVCWY 324 K V WY Sbjct: 340 KFVGWY 345 >gi|194367735|ref|YP_002030345.1| NAD-dependent epimerase/dehydratase [Stenotrophomonas maltophilia R551-3] gi|194350539|gb|ACF53662.1| NAD-dependent epimerase/dehydratase [Stenotrophomonas maltophilia R551-3] Length = 321 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 75/330 (22%), Positives = 143/330 (43%), Gaps = 25/330 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M +++TG AGFIG+ R L+ + V+ +D Y + + + +D Sbjct: 1 MTILLTGAAGFIGAYTARALL-EADQSVVGLDNFNDYYDPQIKRDRVAALCPTLDLRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D++ + + E +P A+++ AA++ V S+ ++ +N+IG +LE R Sbjct: 60 LTDQQGLAALFDEVKPTAVIHLAAQAGVRYSLENPQAYVDSNLIGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ +G+ RD+ +V D V + Sbjct: 171 HATGLRFFTVYGPWGRPD-MAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVAGILGA 229 Query: 237 LKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L G + R GN+ ++ + I ++ + +PG R Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISV-------IEQAAGRPAQKVYKPMQPGDMVR 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D+ + G+ +E+GL V W Sbjct: 283 TMADTRRAHDAFGFDAVTPIEAGLPPVVQW 312 >gi|228962925|ref|ZP_04124161.1| CDP-abequose synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228796764|gb|EEM44138.1| CDP-abequose synthase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 322 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 54/346 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 R+++TGG GFIGS L + L+ + V ++ + NL LK++ ++ +QV D Sbjct: 9 RILITGGHGFIGSHLVKRLLKE-GAHVFILAR--EHANLWRLKKVLKN-----IQVWNGD 60 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESH---VDRSILGADEFITTNIIGTFILLEETRLWW 115 I + +++ +++ QPD + + AA++ D SI I TNIIGT ++E RL Sbjct: 61 IINAVEVQTIVRQIQPDYVFHLAADTEHSLQDNSI----SKIKTNIIGTTNIMEAVRLI- 115 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 C + + + + YG + +E+ P NP Y TKA++ + Sbjct: 116 GCK--------KVINLGSSSEYG-VTINPINENTPLNPQEIYGITKAAATQIAHHIAKRS 166 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 I ++ N +G + L I+++I+ V L Q RD+ Y+E+ V L L Sbjct: 167 KINIVTLRPFNIFGEGASSKNLFTYIISQLIQDKEVHLTHCTQ-TRDYCYIENIVTGLIL 225 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP--GH-- 290 I E +NIG L + K + H R +P GH Sbjct: 226 AATNTGIKNEIFNIGSGETHP-----------LKFFVEKIFQHFNSQR----KPLYGHIP 270 Query: 291 ---DRRYAI--DSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 R + D KIK+++ W ++E G+ T+ WY +N W+ Sbjct: 271 YSLQERLEVTSDVQKIKNKLNWKVVVSLEEGIKNTINWYKNNQEWY 316 >gi|229014762|ref|ZP_04171865.1| Nucleotide sugar epimerase [Bacillus mycoides DSM 2048] gi|228746528|gb|EEL96428.1| Nucleotide sugar epimerase [Bacillus mycoides DSM 2048] Length = 266 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 20/271 (7%) Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 I +E++P+ +VN AA++ V SI D +I +N+IG + +LE R + Sbjct: 1 MITKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNVIGFYNILEACRHFPVD------ 54 Query: 124 DQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + S+ VYG+ K F E D NP S Y++TK S++ + + H Y IP Sbjct: 55 ---HLVYASSSSVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYKIPATGL 111 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQN--VRDWLYVEDHVRALYLVLK 238 YGP P+ + G + ++ GD +N RD+ Y++D V + +L Sbjct: 112 RFFTVYGPMGRPDMAYFGFTDKYFAGDSIKIFNNGDFENDLYRDFTYIDDIVEGIQRLLS 171 Query: 239 ---KGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 KG + + +NIG NN K + + + +L + + + ++ I +PG Sbjct: 172 NPPKGDVEHKVFNIGNNNPEKLMVFIETLEKVLGKALGREVTFEKVFEPI--KPGDVPAT 229 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + ++ + + P+ ++E GL + WY+ Sbjct: 230 YASTDLLQKAVDFKPETSIEKGLQEFANWYV 260 >gi|198275337|ref|ZP_03207868.1| hypothetical protein BACPLE_01498 [Bacteroides plebeius DSM 17135] gi|198271920|gb|EDY96190.1| hypothetical protein BACPLE_01498 [Bacteroides plebeius DSM 17135] Length = 363 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 26/279 (9%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F D+ D I + + +P I N AA+SHV S + + G +LE Sbjct: 53 FHLHYADLGDSMSILQVISKVRPTEIYNLAAQSHVQVSFDSPEYTANVDATGVLRVLEAV 112 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 RL C KD R Q ST E+YG +++ +E+ P++P SPY+ K ++V + Sbjct: 113 RL---C---GLKDTCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKLYGYWIVREY 166 Query: 172 GHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYV 226 Y + +L ++ S G F + I LA R+ +G LY G+ ++RDW Y Sbjct: 167 REAYNMFCCSGILFNHESERRGE-TFVTRKITLAAARIAQGKQEKLYLGNLDSLRDWGYA 225 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVF--------EIGFLLDALIPKSYSHT 278 +D+V ++L+L+ E + I + + + E+ F + + K Y Sbjct: 226 KDYVECMWLILQH-ETPEDFVIATGVQHSVREFCYLAFKYAGIELEFKGEGINEKGYDKA 284 Query: 279 E---LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQEN 312 L+ ED RP D +K K+++GW P + Sbjct: 285 TGKCLVEVSEDFYRPTDVVNLWGDPTKAKAKLGWNPSKT 323 >gi|213052476|ref|ZP_03345354.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 373 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|77862403|gb|ABB04471.1| putative UDP-N-acetyl-glucosamine-4-epimerase [Yersinia kristensenii] Length = 333 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 32/336 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQVD 58 ++TG AGFIGS L L+ + +V+ +D N SL Q F+F++ D Sbjct: 9 LITGVAGFIGSNLLESLLLLNQ-KVVGLDNFATGHQYNLDEVQSLVTEDQWAQFTFIEGD 67 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWS 116 ICD + + A+ + +++ AA V RSI AD T NI G +L R Sbjct: 68 ICDADVCQKAV--VGVNYVLHEAALGSVPRSI--ADPLTTNAANITGFLNMLVAAR---- 119 Query: 117 CLSQDKK-DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 DKK D F + S+ YG E+ NP SPY+ TK ++ + TY Sbjct: 120 ----DKKVDSFTYAASSS--TYGDHPALPKVEENIGNPLSPYAVTKYVNELYAQVFARTY 173 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P +IP + MI VF+ GDG+ RD+ Y+E+ V+ Sbjct: 174 GFKTIGLRYFNVFGKRQDPNGAYAAVIPKWTSAMINNDDVFINGDGETSRDFCYIENVVQ 233 Query: 232 A--LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L + E YN+ +R ++ +F L +AL + + + + + R G Sbjct: 234 MNILAALANDAAKNEVYNVAV-GDRTTLNELFNA--LKNALRNNNVLYEKSAVYKDFRSG 290 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R D SK K +G+ N+ G+ + + WY+ Sbjct: 291 DVRHSQADISKAKRSLGYIASHNIFDGVEEAMPWYI 326 >gi|22298176|ref|NP_681423.1| GDP-mannose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] gi|22294355|dbj|BAC08185.1| GDP-mannose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] Length = 359 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 135/322 (41%), Gaps = 29/322 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 R ++TG G GS L L+ +V I + T N + + I + Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHIYVDPHQEGATLRLHY 64 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R ++ QPD I N A+SHV S + T +GT LLE R + Sbjct: 65 GDLTDGSTLRRIIELSQPDEIYNLGAQSHVRVSFDAPQYTVDTVAMGTLRLLEAIREY-- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + Q +F Q + E++G + + E P+ P SPY+ K + + + + Y Sbjct: 123 --QERTGKQVKFYQAGSSEMFGLVQEVPQRETTPFYPRSPYACAKVYAHWQTVNYREAYN 180 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ R++ G LY G+ RDW Y +D+VRA Sbjct: 181 LFACNGILFNHESPRRGETFVTRKITRAVARIVAGQQNKLYLGNLDAKRDWGYAKDYVRA 240 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + + E ++ E+ F Y ++E P + R Sbjct: 241 MWLMLQQEQPDD--YVVATGETHSVREFLELAF--------GYVDLNWEDYVEFDPRYLR 290 Query: 293 RYAI-----DSSKIKSEIGWFP 309 + D +K K+ +GW P Sbjct: 291 PTEVDLLLGDPTKAKTVLGWQP 312 >gi|265766800|ref|ZP_06094629.1| CDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_16] gi|263253177|gb|EEZ24653.1| CDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_16] Length = 359 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 156/341 (45%), Gaps = 35/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF GS L +L ++L +V+ + + + N + + + L+ DI D Sbjct: 14 RVLVTGHTGFKGSWLSIWL-HELGAEVIGVAQAPFTARDNFVLSGIGEKIKADLRADIRD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I++ +E+QP+ + + AA+ V S E TN++GT +LE R Sbjct: 73 GERIKAIFQEYQPEIVFHLAAQPLVRLSYDIPVETYETNVMGTIHVLEAVR--------- 123 Query: 122 KKDQFRF-LQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 D + + I+TD+ Y + ++ + E+ P PYS++K +++ + +W ++ Sbjct: 124 STDSVKVGVMITTDKCYENKEQIWGYRENEPMGGYDPYSSSKGAAEIAIASWRRSFFHPE 183 Query: 176 -----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G + N G + +++IP I + G+ + + + +R W +V + Sbjct: 184 QYDKHGKSIASVRAGNVIGGGDWALDRIIPDCIKALESGAAIDIRSP-KAIRPWQHVLEP 242 Query: 230 VRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L+ +K R E +N G E +I V+++ + +Y EL Sbjct: 243 LSGYMLLAQKMWSDPTRYCEGWNFGPRAE--SISTVWDVA----TEVVNNYGSGELRDLS 296 Query: 285 EDRPGHDRR-YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + H+ + +D SK K +GW P+ N+E + TV WY Sbjct: 297 DPHALHEAKLLMLDISKAKFRLGWEPKMNIEQTVELTVDWY 337 >gi|256378856|ref|YP_003102516.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM 43827] gi|255923159|gb|ACU38670.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM 43827] Length = 341 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 149/335 (44%), Gaps = 37/335 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGG GF+GS L+ VL + + L E+ +++ +VD+ D Sbjct: 20 VLVTGGLGFLGSHFTTELLAS-GAHVLCLHR---GDRFGRLAELPRTSALRTARVDLHDE 75 Query: 63 ECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +A+ P DA+V+ AA + G EF N IL R + L+ Sbjct: 76 RALAAAVDAHTPAVDAVVHCAA-------LDGNAEFKLKN--SARILDTNLRFTSNVLNC 126 Query: 121 DKKDQFR-FLQISTDEVYGSLDKGLFSED------MPYNPSSPYSATKASSDYLVLAWGH 173 ++ + R + +S+ EVY + D +E+ M Y P Y +K + L + Sbjct: 127 ARERRVRDVVLVSSAEVYRTDDSAPVAEEHDYRSRMRYAPDG-YYLSKVFGEVLAELYRD 185 Query: 174 TYGIPVLLSNCSNNYGP---YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 +G+ + L+ +N YGP +H P +++P + + G + ++GDG+ R +++ D Sbjct: 186 QFGMNLFLARPTNVYGPRDGFHAPSGRVVPSMMACLARGQDIEVWGDGRQTRSFVHAADV 245 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 +A ++ R +NIG D+ + LD +P +RF+ DRP Sbjct: 246 AKATLQMVAANR-HRTFNIGTGESVSIADLAHAVAEALD--VPGR------VRFLFDRPT 296 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D S++ + + P+ ++ GL +T W+ Sbjct: 297 GPSARQLDVSRMAGVVDFTPR-SLAVGLRETADWF 330 >gi|119896318|ref|YP_931531.1| putative dTDP-glucose 4-6-dehydratase [Azoarcus sp. BH72] gi|119668731|emb|CAL92644.1| putative dTDP-glucose 4-6-dehydratase [Azoarcus sp. BH72] Length = 312 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 139/330 (42%), Gaps = 37/330 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LCR L+ D +VL D + G+ ++ ++ + F L+ DI Sbjct: 1 MRVLVTGGAGFIGSHLCRRLLADGH-EVLSADNY-FTGSRRNIHDLLGNPDFEALRHDI- 57 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D I NFA + + T++ G + L Sbjct: 58 ------TFPLYVEVDRIYNFACPASPVHYQYDPVQTTKTSVHGAI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R LQ ST EVYG + +ED P P S Y K ++ L + + Sbjct: 102 AKRTGARVLQASTSEVYGDPEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQH 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP P ++I I + + G + LYGDG R + +V D V + Sbjct: 162 RVEIKVVRIFNTYGPGMQPNDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGV 221 Query: 234 YLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 ++ G G N+G E + ID + E+ L S S ED P Sbjct: 222 VRMMDSPAGFTGP-VNLGNPTEYR-IDALAELILRLCG----SRSRLVFRPLPEDDPCQR 275 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + D + + + W P+ +E GL T+ Sbjct: 276 Q---PDITLARERLAWTPRVALEDGLRDTI 302 >gi|16765439|ref|NP_461054.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180680|ref|YP_217097.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613211|ref|YP_001587176.1| hypothetical protein SPAB_00921 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551055|ref|ZP_02344810.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991024|ref|ZP_02572123.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168236267|ref|ZP_02661325.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242182|ref|ZP_02667114.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259587|ref|ZP_02681560.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466233|ref|ZP_02700103.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818202|ref|ZP_02830202.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194450416|ref|YP_002046159.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194738147|ref|YP_002115198.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250836|ref|YP_002147067.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|198245271|ref|YP_002216196.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204928992|ref|ZP_03220135.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207857545|ref|YP_002244196.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238912538|ref|ZP_04656375.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|10946239|gb|AAG24813.1| GDP-D-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420642|gb|AAL21013.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62128313|gb|AAX66016.1| GDP-D-mannose dehydratase in colanic acid gene cluster [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362575|gb|ABX66343.1| hypothetical protein SPAB_00921 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408720|gb|ACF68939.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713649|gb|ACF92870.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631295|gb|EDX49855.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214539|gb|ACH51936.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290635|gb|EDY29990.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939787|gb|ACH77120.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321536|gb|EDZ06735.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324083|gb|EDZ11922.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330524|gb|EDZ17288.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338307|gb|EDZ25071.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344976|gb|EDZ31740.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205351085|gb|EDZ37716.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709348|emb|CAR33688.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247324|emb|CBG25149.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994164|gb|ACY89049.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158670|emb|CBW18182.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913100|dbj|BAJ37074.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224757|gb|EFX49820.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615138|gb|EFY12060.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617730|gb|EFY14626.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624676|gb|EFY21507.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626873|gb|EFY23669.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634059|gb|EFY30795.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635750|gb|EFY32460.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640247|gb|EFY36910.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646337|gb|EFY42850.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649429|gb|EFY45865.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656551|gb|EFY52840.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661526|gb|EFY57750.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665586|gb|EFY61770.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667110|gb|EFY63277.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671116|gb|EFY67244.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322680852|gb|EFY76887.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687027|gb|EFY83004.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715152|gb|EFZ06723.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323192791|gb|EFZ78018.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198778|gb|EFZ83877.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204909|gb|EFZ89900.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208256|gb|EFZ93200.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209859|gb|EFZ94776.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215719|gb|EGA00462.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223928|gb|EGA08225.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231164|gb|EGA15279.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233599|gb|EGA17691.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237669|gb|EGA21729.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245653|gb|EGA29647.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247729|gb|EGA31671.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252944|gb|EGA36777.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256747|gb|EGA40472.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260877|gb|EGA44478.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268236|gb|EGA51711.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272203|gb|EGA55616.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989044|gb|AEF08027.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 373 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|76818296|ref|YP_336535.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1710b] gi|126443608|ref|YP_001064149.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 668] gi|126455809|ref|YP_001077058.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1106a] gi|134281827|ref|ZP_01768534.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 305] gi|167744240|ref|ZP_02417014.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 14] gi|167821443|ref|ZP_02453123.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 91] gi|167829785|ref|ZP_02461256.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 9] gi|167851253|ref|ZP_02476761.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei B7210] gi|167899885|ref|ZP_02487286.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 7894] gi|167908207|ref|ZP_02495412.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei NCTC 13177] gi|167924403|ref|ZP_02511494.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei BCC215] gi|226199214|ref|ZP_03794774.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei Pakistan 9] gi|237509301|ref|ZP_04522016.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia pseudomallei MSHR346] gi|242313987|ref|ZP_04813004.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1106b] gi|254187079|ref|ZP_04893594.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254192584|ref|ZP_04899023.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei S13] gi|254263000|ref|ZP_04953865.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1710a] gi|76582769|gb|ABA52243.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1710b] gi|126223099|gb|ABN86604.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 668] gi|126229577|gb|ABN92990.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1106a] gi|134246889|gb|EBA46976.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 305] gi|157934762|gb|EDO90432.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei Pasteur 52237] gi|169649342|gb|EDS82035.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei S13] gi|225928621|gb|EEH24648.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei Pakistan 9] gi|235001506|gb|EEP50930.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia pseudomallei MSHR346] gi|242137226|gb|EES23629.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1106b] gi|254214002|gb|EET03387.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1710a] Length = 348 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 41/338 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + VL +D Y G +++ + + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVAEGH-DVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAI----------NML 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG E P + Y K ++ L + + Sbjct: 106 GLAKRLKARILQASTSEVYGDPASHPQRESYWGHVNPVGIRACYDEGKRCAETLFVDYHR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ + ++ N YGP P +++ I + + + + +YGDG+ R + YV+D + Sbjct: 166 QYGVDIRIARIFNTYGPRMHPADGRVVSNFIMQALADAPLTVYGDGRQTRAFCYVDDLID 225 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ G + E N+G E + I E+ + A + E D P Sbjct: 226 ALIRLMAAPGPMPEPMNLGNAEEVSMLQIAREVVRVTGASVA-----IEFRPLPADDP-- 278 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R+ D + +GW + GL TV +++ Sbjct: 279 -RQRCPDLGFARERLGWRATTTLADGLAATVRYFIQRQ 315 >gi|307718106|ref|YP_003873638.1| UDP-glucose 4-epimerase [Spirochaeta thermophila DSM 6192] gi|306531831|gb|ADN01365.1| UDP-glucose 4-epimerase [Spirochaeta thermophila DSM 6192] Length = 324 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 49/351 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MR ++TGGAG+IGS + R L+ + +V+V D L++ G+ +++ L+V D+ Sbjct: 1 MRFVLTGGAGYIGSHVYR-LLKERGHEVVVYDNLSH-GHREAVEPAD-------LRVGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E +R L F+PD +++FAA V S EF N +GT L++ + Sbjct: 52 HDTETLREVLLSFKPDVVMHFAAFIEVGISTERPLEFFENNTVGTIRLVQ---------T 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA---WGHTYG 176 F+ ST VYG +K ED P +PY ++K + + + W Sbjct: 103 MMHTGVHHFIFSSTAAVYGHPEKIPIPEDARLTPVNPYGSSKVMVEEFLRSLSEWSPFRY 162 Query: 177 IPVLLSNCS-----NNYGPYHFPE-KLIPLAITRMIEGS--HVFLYG------DGQNVRD 222 + + N + + G H PE LIPL I + +G H+ ++G DG +RD Sbjct: 163 VAIRYFNAAGAAEDGSIGEAHDPETHLIPL-ILKAAKGERPHITIFGTDFPTPDGTAIRD 221 Query: 223 WLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELI 281 +++V+D A L + Y + G E + ++ + G+ + +I + T Sbjct: 222 YIHVDDLAEAHLLAAE-------YLMDG-GESQALNCGYSRGYSVREVIETAKKVTGRDF 273 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV-CWYLDNNW 329 IE R G DSS++++ +GW P + + + KT W L+ + Sbjct: 274 PVIEGDRRAGDPPALVADSSRMRTILGWKPTRDDLAYIIKTAWNWELNRRY 324 >gi|126662213|ref|ZP_01733212.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium BAL38] gi|126625592|gb|EAZ96281.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium BAL38] Length = 322 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 28/333 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS LC Y +N QV+ +D G+ +++ ++ F+ L+ DI + Sbjct: 3 KILITGGAGFIGSNLCEYFLNKGN-QVVCLDNFA-TGHRHNIAPFLENKNFTLLEGDIRN 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + A + D +++ AA V RS+ N+ G +L R D Sbjct: 61 LQDCQKATEGV--DYVLHQAALGSVPRSLKDPITSNEVNVTGFLNMLVAAR--------D 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + RF+ ++ +YG ED+ P SPY+ TK ++ + TYGI + Sbjct: 111 AKVK-RFVYAASSSIYGDSQGLPKVEDVIGKPLSPYAITKYVNELYADIFSKTYGIETIG 169 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA--LYL 235 N +G P +IPL + + + + GDG RD+ Y+++ ++ L + Sbjct: 170 LRYFNVFGRRQDPNGAYAAVIPLFVKQFMSHESPVINGDGNFSRDFTYIDNVIQMNELAM 229 Query: 236 VLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALI---PKSYSHTELIRFIEDRPGHD 291 + K + I YN + +V L D L+ PK + E++ +R G Sbjct: 230 LTKNTQAINTVYNTAYGDRTTLAQLV---QLLKDNLVQFDPK-IAEVEVLHG-PNRAGDI 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K K +G+ P+ ++E G+ + V WY Sbjct: 285 PHSLASIEKAKKNLGYSPKYSIEQGIKEAVSWY 317 >gi|56412990|ref|YP_150065.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361918|ref|YP_002141555.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127247|gb|AAV76753.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093395|emb|CAR58847.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 373 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|89098347|ref|ZP_01171231.1| UDP-2-acetamido-2,6-dideoxy-hexulose 4-reductase [Bacillus sp. NRRL B-14911] gi|89086896|gb|EAR66013.1| UDP-2-acetamido-2,6-dideoxy-hexulose 4-reductase [Bacillus sp. NRRL B-14911] Length = 312 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 139/320 (43%), Gaps = 49/320 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC- 60 R+++TG +GF G C Y + + + GNL S+++ Q++IC Sbjct: 6 RILITGASGFTGRHACSYF----RKKGFFTAASVHRGNLQE----SEAD-----QIEICN 52 Query: 61 --DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+ + +K+ P +++ AA++HV +S N++ T LLE R Sbjct: 53 LLDKNSLDQLVKKTDPGYVLHLAAQNHVGKSWEDPSSSFEANVLSTLYLLEALRRL---- 108 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 K + R L V GS + SED P+ PYS TK+ L AW + + Sbjct: 109 ----KPEARVL------VTGSALQSC-SEDHPH----PYSLTKSMQTSLARAWESLFKMD 153 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALY 234 V+++ N GP + L I RM G V Q+ RD+L V D VRA Sbjct: 154 VMIAKPCNLIGPGNSNGVCSLFASRIARMESGLEEKVLYVNSLQSSRDFLDVRDAVRAYG 213 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L KG GE Y++ + D+ G+L K+ + T+ + RY Sbjct: 214 FILDKGERGEIYDVSSGSSLTLGDVA---GYL------KACAKTDFEVDSKSADPDSERY 264 Query: 295 AIDSSKIKSEIGWFPQENME 314 ++D K++ ++GW P+ + E Sbjct: 265 SLDPGKLQ-KLGWNPEISRE 283 >gi|229822959|ref|ZP_04449029.1| hypothetical protein GCWU000282_00251 [Catonella morbi ATCC 51271] gi|229787772|gb|EEP23886.1| hypothetical protein GCWU000282_00251 [Catonella morbi ATCC 51271] Length = 342 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 63/347 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+ +V+++D + + LN +++IS + F+F QVD Sbjct: 1 MAILVTGGAGYIGSHTVVELLA-AGHEVVIVDNFSNSKPEVLNRIRQISGKD-FAFYQVD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D++ +R KE A+++F+ V S+ ++ N+ G L+E Sbjct: 59 VLDKDAMRQVFKENDIQAVIHFSGFKAVGESVAEPIKYYHNNVGGAIALVEVM------- 111 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLV--LA-- 170 ++F I S+ VYG + +EDMP + +SPY +T + + LA Sbjct: 112 -----NEFGVKHIVFSSSATVYGLNNPSPLTEDMPTHTANSPYGSTMVMKEQIFRDLAVS 166 Query: 171 ---WGHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG----- 215 W T Y P+ ++ S G P P L+P IT++ G + ++G Sbjct: 167 DPDWSITILRYFNPI-GAHASGRIGEDPQGIPNNLMPY-ITQVAVGKLPALSVFGNDYPT 224 Query: 216 -DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 DG VRD+++V D H++AL L + E YN+G +D+V Sbjct: 225 HDGTGVRDYIHVVDLSLGHLKALDRNLTVKGV-ETYNLGTGEGYSVLDLV---------- 273 Query: 271 IPKSYSHTELI----RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 K++ I + ++ RPG D+S+ +GW+ Q N+ Sbjct: 274 --KAFEEANGIKVNYKIVDRRPGDVAACYSDASRANQLLGWYAQRNL 318 >gi|186474029|ref|YP_001861371.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] gi|184196361|gb|ACC74325.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] Length = 341 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV L VL +D Y G +++ + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVA-LGHDVLCVDNF-YTGTKDNIAHLLDCANFEMMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAINM----------LGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + Q ST EVYG ED P P S Y K ++ L + + +G Sbjct: 109 KRVGAKIFQASTSEVYGDARVHPQKEDYWGHVNPIGPRSCYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + + G + +YGDG R + +V+D + A Sbjct: 169 LEIRIARIFNTYGPRMHPADGRVVSNFVMQALSGEPLTVYGDGSQTRSFCFVDDMIDAFI 228 Query: 235 LVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ + N+G +E +DI I I S S E D P H + Sbjct: 229 RLMNLDAYPDGPVNLGNPHEVSMLDIAQRI-----VEITGSSSAIEFRPLPIDDPWHRQP 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ + + W PQ ++ GL +TV ++ Sbjct: 284 ---DIARARQLLAWQPQTSLGDGLAETVRYF 311 >gi|324990821|gb|EGC22756.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK353] Length = 347 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECSV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADRAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G+ + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNILGWQPKFDNIETIIETAWKWH 336 >gi|271969425|ref|YP_003343621.1| GDP-mannose 4,6-dehydratase [Streptosporangium roseum DSM 43021] gi|270512600|gb|ACZ90878.1| GDP-mannose 4,6-dehydratase [Streptosporangium roseum DSM 43021] Length = 342 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 15/320 (4%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TG G GS L L+++ +V + + ++ ++++ Q ++ D+ D Sbjct: 4 RALITGITGQDGSYLAECLLSE-GYEVWGLVRGQANPRVSRVRKLLQD--VQLVRGDLLD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW---SCL 118 + + SA+++ QPD + N A S V S A+ +G +LE R+ S Sbjct: 61 QGSLISAVEKVQPDEVYNLGAISFVPMSWEQAELTAEVTGMGVLRMLEAIRVCSGISSSR 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + Q RF Q S+ E++G + + +E P++P SPY KA +L + +YG+ Sbjct: 121 TAAGSGQIRFYQASSSEMFGQVRETPQTEITPFHPRSPYGVAKAYGHFLTQNYRESYGMY 180 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALY 234 + N+ P F + + L + R+ G L G+ + RDW Y D+VRA++ Sbjct: 181 AVSGILFNHESPRRGAEFVTRKVTLGVARIKLGLATELRLGNMEARRDWGYAGDYVRAMH 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L+L + E Y IG ++V E F L + + RP Sbjct: 241 LML-QADTPEDYVIGTGRTHSVRELV-EAAFAAAGL---DWERHVVGDQSLHRPAEVDLL 295 Query: 295 AIDSSKIKSEIGWFPQENME 314 D K + ++GW P + E Sbjct: 296 CADPKKARVQLGWEPSVSFE 315 >gi|110669372|ref|YP_659183.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109627119|emb|CAJ53601.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 345 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 92/338 (27%), Positives = 146/338 (43%), Gaps = 43/338 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GNLNSLKEISQSNLFSFLQVDIC 60 R +VTGGAGFIGS L L+ + +V++ D + G L L+ + VD+ Sbjct: 17 RALVTGGAGFIGSFLVESLL-ERGSEVVIADNFSKGHGKLTHLE-----DDIEIKTVDLT 70 Query: 61 DRECIRSALKEFQPDAIVNFAAE----SHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + A ++ D + + AA ++ R + +T +++ +LE R+ Sbjct: 71 THKGCIEATEDI--DDVYHLAASVGGIHYIQRENVHG---LTPSVLMNQHMLEAARI--- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGL--FSED--MPYNPSSPYSATKASSDYLVLAWG 172 +D RFL S+ VY L FSED +P NP S Y K + A+ Sbjct: 123 ------QDVDRFLFASSACVYRQQHDELNRFSEDQAIPANPHSTYGWAKVLGEVACDAYH 176 Query: 173 HTYGIPVLLSNCSNNYGPYHF--PEK--LIPLAITRMIE---GSHVFLYGDGQNVRDWLY 225 + N YGP P+ +IP ++IE G + L+GDG R ++Y Sbjct: 177 TDTTVDTGAVRIFNAYGPRENLDPDSSHVIPALCRKVIEADDGDSIELFGDGTQERGFIY 236 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 + D V + ++ GE N+G +E V I L +I S E+ + Sbjct: 237 ITDLVEGMIQAMEHKTDGEPINLGNGDE------VVTINELAQKIIALSGKDIEVEHDLS 290 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 G D+ YA D++K+K E+GW P +E GL + W Sbjct: 291 KPTGTDK-YACDTTKMKDELGWEPTTPLEEGLQEVYEW 327 >gi|313632019|gb|EFR99132.1| UDP-glucose 4-epimerase [Listeria seeligeri FSL N1-067] Length = 327 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 144/336 (42%), Gaps = 57/336 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IV GGAG+IGS LVN V+V+D L G+ ++ E ++ F Q DI Sbjct: 1 MSIIVLGGAGYIGSHAVAELVNR-GYNVVVVDNLK-TGHKEAIHEKAK-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + S D +++FAA S V S+ +++ N+ GT ILLE Sbjct: 54 DKDFLSSVFDRETVDGVMHFAASSLVGESMEEPLQYLNNNVYGTQILLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ E M NP S Y TK + ++ YG+ Sbjct: 105 ---EQFGVKNIVFSSSAATYGEPEQVPIIESMSTNPESTYGDTKLIMEKMMKWCDKAYGV 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D+++VED H+R+L L+ G +N+G + GF + ++ + S Sbjct: 222 DYVHVEDLIDAHIRSLEY-LENGGESNIFNLGSSK-----------GFSVQEILGAARSV 269 Query: 278 TELI---RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 TE + R G S K K +GW P+ Sbjct: 270 TEKTIPAEVVARRAGDPGILIASSDKAKEILGWEPK 305 >gi|254732326|ref|ZP_05190904.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str. 292] Length = 294 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 40/308 (12%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D + G + +++ + + FSF++ DI + +R D I N A + Sbjct: 1 MICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNTLDLRV-------DEIYNLACPASPP 52 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 + TN+IG+ LLE + + R Q ST EVYG E Sbjct: 53 HYQADPVHTMKTNVIGSLNLLELAAHYKA----------RIFQASTSEVYGDPHVHPRPE 102 Query: 148 DM-----PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPL 200 + + P S Y K S++ L + YG+ + + N YGP P+ +++ Sbjct: 103 NYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGVDIRIVRIFNTYGPRMRPDDGRVVSN 162 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LVLKKGRIGERYNIGGNNERKNIDI 259 I + ++G + +YGDG R + YV+D + L+ L+ I NIG E Sbjct: 163 FIVQALKGEDITVYGDGSQTRSFCYVDDLIEGLHRLMYSPHAIRVPVNIGNPGE------ 216 Query: 260 VFEIGFLLDALIPKSYSHTELIRF---IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 F +G L + +I + S + ++ + ++D R+ D + K E+GW P + G Sbjct: 217 -FTVGALAEQIIAMTGSRSRIVYYPLPVDD----PRQRRPDITVAKRELGWEPTVALAQG 271 Query: 317 LNKTVCWY 324 L T+ ++ Sbjct: 272 LEPTIAYF 279 >gi|323480311|gb|ADX79750.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] Length = 329 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----AFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +L+A + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLNA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|282878543|ref|ZP_06287324.1| GDP-mannose 4,6-dehydratase [Prevotella buccalis ATCC 35310] gi|281299334|gb|EFA91722.1| GDP-mannose 4,6-dehydratase [Prevotella buccalis ATCC 35310] Length = 353 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 153/363 (42%), Gaps = 66/363 (18%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTY-AGNLNSL------KEISQSNLFSFL 55 ++TG G GS L +L++ ++ L+ ++ G + L +++ + L + Sbjct: 8 LITGITGQDGSYLAEFLIDKGYEVHGLLRRSSSFNTGRIEHLYLDEWVRDMKKDRLVNLH 67 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR--- 112 D+ D + + E P I N AA+SHV S + T+ IG LLE R Sbjct: 68 WADMTDSSSLIRIIGEIHPTEIYNLAAQSHVKVSFDVPEYTADTDAIGVLRLLEAVRICG 127 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L SC R Q ST E++G + + E P+ P SPY+ K +++ + Sbjct: 128 LEKSC---------RIYQASTSELFGKVQEVPQKETTPFYPRSPYAVAKLYGFWIMKNYR 178 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVE 227 +YG+ +L ++ S G +F + I LA R+ G LY G+ RDW Y Sbjct: 179 ESYGMYCCNGILFNHESERRGE-NFVTRKITLAAARIAHGLQDKLYLGNLDARRDWGYAP 237 Query: 228 DHVRALYLVLKKGR-------IGERYNI-------------------GGNNERKNIDIVF 261 D+V+ ++L+L++ + GE Y++ G NE K ID Sbjct: 238 DYVQCMWLMLQQEQPDDFVIATGEYYSVRDFATLAFHYAGIELEWKDKGMNE-KGIDKA- 295 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G +L + PK + RP + D +K K ++GW P++ L K + Sbjct: 296 -TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKEKLGWNPRQTSFEELVKRM 343 Query: 322 CWY 324 Y Sbjct: 344 TEY 346 >gi|298207177|ref|YP_003715356.1| NAD-dependent epimerase/dehydratase family protein [Croceibacter atlanticus HTCC2559] gi|83849812|gb|EAP87680.1| NAD-dependent epimerase/dehydratase family protein [Croceibacter atlanticus HTCC2559] Length = 339 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 41/349 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TG AGF+GS LC +N+ V+ +D L G+L +++ + F F D+ Sbjct: 14 RVLITGAAGFVGSHLCDKFINE-GCHVIGMDNLI-TGDLKNIEHLFALENFEFYHHDVSK 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +L D I++FA+ + + + + +GT LL L+++ Sbjct: 72 FVHVAGSL-----DYIMHFASPASPIDYLKIPIQTLKVGSLGTHNLL--------GLAKE 118 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 K R L ST EVYG D + + Y P Y K + + +A+ Sbjct: 119 KGA--RILIASTSEVYG--DPKVHPQAETYYGNVNTIGPRGVYDEAKRFQESITMAYHRF 174 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ ++ N YGP ++IP I + + G ++ ++GDG R + Y++D V Sbjct: 175 HGLETRIARIFNTYGPRMRLNDGRVIPAFIGQALRGENLTVFGDGLQTRSFCYIDDQVEG 234 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 LY +L + NIG E +D EI I + S ++I + P D Sbjct: 235 LYSLLMSDYT-DPVNIGNPEEITILDFAEEI-------IKLTNSDQKII--FKPLPTDDP 284 Query: 293 -RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY--LDNNWWWRPLYKEL 338 + D + K E+ W P+ + E G+ KT ++ L +R +K+ Sbjct: 285 LQRKPDITVAKRELSWSPKVSREDGMQKTYAYFKGLSEEELYRSEHKDF 333 >gi|224583403|ref|YP_002637201.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467930|gb|ACN45760.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320086541|emb|CBY96312.1| GDP-D-mannose dehydratase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323130432|gb|ADX17862.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623943|gb|EGE30288.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 375 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 8 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 67 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 123 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 240 Query: 235 LVLKK 239 ++L++ Sbjct: 241 MMLQQ 245 >gi|170747108|ref|YP_001753368.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170653630|gb|ACB22685.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 338 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 43/346 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQV 57 +++TG AGFIG+ L L+ + V+ +D + ++ LKE L +SF ++ Sbjct: 6 VLITGVAGFIGNQLALRLLEAGR-PVVGLDSVNAYYDVR-LKEARLQRLAGFPGYSFARL 63 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ + + + +++ AA++ V S+ + +N++G +LE R Sbjct: 64 DLADRDGLDALFRRHAFRTVIHLAAQAGVRYSLTDPHAYAASNLVGFLNILEACR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 L S+ VYG + FS + P S Y+ATK +++ + ++ H YG Sbjct: 119 ----HGGVGHLLYASSSSVYGGVTAMPFSVHQNVDHPLSLYAATKKANELMAHSYSHLYG 174 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + L ++ G + ++ +G+ +RD+ Y++D V + + Sbjct: 175 LPTTGLRFFTVYGPWGRPDMALYLFTRAILAGEPIRVFNEGRMLRDFTYIDDIVAGIQAL 234 Query: 237 LKK---------GRIGER---------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G + + YNI GNNE + ++ I L DAL K+ Sbjct: 235 AERPAAPDPGWSGAVPDPGTSSAPYRIYNI-GNNE--PVALLEMITLLEDALGRKA---- 287 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 E I + +PG D + + G+ P +++G+ V WY Sbjct: 288 EKI-LLPMQPGDVPATYADIDDLVRDAGFRPATPLKTGIGHFVDWY 332 >gi|49258949|pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N- Acetylglucosamine 4-Epimerase Complexed With Udp-N- Acetylgalactosamine gi|49258950|pdb|1SB9|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N- Acetylglucosamine 4-Epimerase Complexed With Udp-Glucose Length = 352 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 146/341 (42%), Gaps = 42/341 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ +L E+ Q + F F+Q Sbjct: 31 LITGVAGFIGSNLLETLLK-LDQKVVGLDNFA-TGHQRNLDEVRSLVSEKQWSNFKFIQG 88 Query: 58 DI-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI C+ C D +++ AA V RSI TNI G +L R Sbjct: 89 DIRNLDDCNNACAGV-------DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 141 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 D K Q F ++ YG ED P SPY+ TK ++ + Sbjct: 142 --------DAKVQ-SFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS 192 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 YG + N +G P +IP + MI+G V++ GDG+ RD+ Y+E+ Sbjct: 193 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN 252 Query: 229 HVRALYLVLKKG--RIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+A L G + YNI GG R +++ +F L D L S+ + Sbjct: 253 TVQANLLAATAGLDARNQVYNIAVGG---RTSLNQLFFA--LRDGLAENGVSYHREPVYR 307 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + R G R D SK +G+ P+ ++ +G+ + WY+ Sbjct: 308 DFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI 348 >gi|326628339|gb|EGE34682.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 375 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 8 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 67 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 123 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 240 Query: 235 LVLKK 239 ++L++ Sbjct: 241 MMLQQ 245 >gi|331653462|ref|ZP_08354463.1| GDP-mannose 4,6-dehydratase [Escherichia coli M718] gi|331048311|gb|EGI20387.1| GDP-mannose 4,6-dehydratase [Escherichia coli M718] Length = 372 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + +TG G GS L +L+ D +V I + + N + I Q N FL Sbjct: 3 KAFITGITGQDGSYLAEFLL-DKGYEVHGIKRRASSFNTERVDHIYQDRHNQNPNFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD + N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLVRLIKEIQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + K RF Q ST E++G + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 CGLEKKT---RFYQASTSELFGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI + +G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANISQGIEKCLYLGNMDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|326510705|dbj|BAJ91700.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326524331|dbj|BAK00549.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 378 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 122/278 (43%), Gaps = 26/278 (9%) Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D +R AL PD + N AA+SHV S D G LLE RL Sbjct: 99 ADLSDSSSLRRALDHVLPDEVYNLAAQSHVAVSFEVPDYTADVTATGALRLLEAVRL--- 155 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 R+ Q + E++GS SE P++P SPY+A K ++ + + + YG Sbjct: 156 -----SAKPMRYYQAGSSEMFGSTPPPQ-SEATPFHPRSPYAAAKVAAHWYTVNYREAYG 209 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHV 230 I VL ++ S G +F + I AI R+ G + VFL G+ RDW + D+V Sbjct: 210 IFACNGVLFNHESPRRG-ENFVTRKITRAIGRIKVGLQTKVFL-GNLSAARDWGFAGDYV 267 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 A++L+L++ + + + E ++ + F L K + + F RP Sbjct: 268 EAMWLMLQQDKPDD--YVVATEECHTVEEFLQAAFGYAGLNWKDHVVIDKKYF---RPSE 322 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 DSSK + +GW P+ G + V +DN+ Sbjct: 323 VDCLQGDSSKSRRVLGWKPK----VGFQQLVEMMVDND 356 >gi|167725320|ref|ZP_02408556.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei DM98] Length = 348 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 41/338 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + VL +D Y G +++ + + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVAEGH-DVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAI----------NML 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG E P + Y K ++ L + + Sbjct: 106 GLAKRLKARILQASTSEVYGDPASHPQRESYWGHVNPVGIRACYDEGKRCAETLFVDYHR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ + ++ N YGP P +++ I + + + + +YGDG+ R + YV+D + Sbjct: 166 QYGVDIRIARIFNTYGPRMHPADGRVVSNFIMQALADAPLTVYGDGRQTRAFCYVDDLID 225 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ G + E N+G E + I E+ + A + E D P Sbjct: 226 ALIRLMAAPGPLPEPMNLGNAEEVSMLQIAREVVRVTGASVA-----IEFRPLPADDP-- 278 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R+ D + +GW + GL TV +++ Sbjct: 279 -RQRCPDLGFARERLGWRATTTLADGLAATVRYFIQRQ 315 >gi|20560072|gb|AAM27817.1|AF498417_6 wbpP [Pseudomonas aeruginosa] Length = 341 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 146/341 (42%), Gaps = 42/341 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ +L E+ Q + F F+Q Sbjct: 20 LITGVAGFIGSNLLETLLK-LDQKVVGLDNFA-TGHQRNLDEVRSLVSEKQWSNFKFIQG 77 Query: 58 DI-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI C+ C D +++ AA V RSI TNI G +L R Sbjct: 78 DIRNLDDCNNACAGV-------DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 D K Q F ++ YG ED P SPY+ TK ++ + Sbjct: 131 --------DAKVQ-SFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS 181 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 YG + N +G P +IP + MI+G V++ GDG+ RD+ Y+E+ Sbjct: 182 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN 241 Query: 229 HVRALYLVLKKG--RIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+A L G + YNI GG R +++ +F L D L S+ + Sbjct: 242 TVQANLLAATAGLDARNQVYNIAVGG---RTSLNQLFFA--LRDGLAENGVSYHREPVYR 296 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + R G R D SK +G+ P+ ++ +G+ + WY+ Sbjct: 297 DFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI 337 >gi|114321949|ref|YP_743632.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii MLHE-1] gi|114228343|gb|ABI58142.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii MLHE-1] Length = 317 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 142/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+ + +VL +D + G S+ + F ++ DI Sbjct: 8 RVLVTGGAGFIGSHLCERLLAEGH-EVLCVDNF-FTGTKQSIAHLRDYPEFEAIRHDI-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + I N A + + T++ G + L Sbjct: 64 -----TFPLYLEVEEIYNLACPASPVHYQHDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG E P P S Y K ++ L + + Sbjct: 109 KRLKARILQASTSEVYGDPSVHPQPESYVGSVNPIGPRSCYDEGKRCAETLFFDYYKQHA 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ I + + G + +YG+G+ R + YV+D V L Sbjct: 169 LEIKVARIFNTYGPRMHPHDGRVVSNFIVQALSGEPITVYGEGRQSRSFCYVDDLVDGLA 228 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ + N+G E F I L + +I + S + L+ +D P Sbjct: 229 RLMATPPEVTGPINLGNPVE-------FTIRALAERVIELTGSKSRLVFRPLPQDDP--- 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S+ ++E+ W P ++ GL +T+ ++ Sbjct: 279 RQRCPDISRARAELDWAPVTALDEGLRRTIEYF 311 >gi|53716115|ref|YP_106500.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei ATCC 23344] gi|53723263|ref|YP_112248.1| epimerase [Burkholderia pseudomallei K96243] gi|67639969|ref|ZP_00438794.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia mallei GB8 horse 4] gi|121596843|ref|YP_990598.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei SAVP1] gi|124382205|ref|YP_001025090.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei NCTC 10229] gi|126446174|ref|YP_001079434.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei NCTC 10247] gi|167003183|ref|ZP_02268973.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei PRL-20] gi|167916548|ref|ZP_02503639.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 112] gi|254176525|ref|ZP_04883183.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei ATCC 10399] gi|254182522|ref|ZP_04889116.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1655] gi|254203509|ref|ZP_04909870.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei FMH] gi|254205386|ref|ZP_04911739.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei JHU] gi|254296533|ref|ZP_04963989.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 406e] gi|52213677|emb|CAH39731.1| putative epimerase [Burkholderia pseudomallei K96243] gi|52422085|gb|AAU45655.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei ATCC 23344] gi|121224641|gb|ABM48172.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei SAVP1] gi|126239028|gb|ABO02140.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei NCTC 10247] gi|147745748|gb|EDK52827.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei FMH] gi|147754972|gb|EDK62036.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei JHU] gi|157806346|gb|EDO83516.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 406e] gi|160697567|gb|EDP87537.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei ATCC 10399] gi|184213057|gb|EDU10100.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia pseudomallei 1655] gi|238520598|gb|EEP84056.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1) [Burkholderia mallei GB8 horse 4] gi|243061228|gb|EES43414.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei PRL-20] gi|261826697|gb|ABM98857.2| NAD-dependent epimerase/dehydratase family protein [Burkholderia mallei NCTC 10229] Length = 348 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 41/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + VL +D Y G +++ + + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVAEGH-DVLCVDNF-YTGAKDNIAHLLDAPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D I N A + H R + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQRDPV---QTTKTSVHGAI----------NML 105 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + R LQ ST EVYG E P + Y K ++ L + + Sbjct: 106 GLAKRLKARILQASTSEVYGDPASHPQRESYWGHVNPVGIRACYDEGKRCAETLFVDYHR 165 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 YG+ + ++ N YGP P +++ I + + + + +YGDG+ R + YV+D + Sbjct: 166 QYGVDIRIARIFNTYGPRMHPADGRVVSNFIMQALADAPLTVYGDGRQTRAFCYVDDLID 225 Query: 232 ALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ G + E N+G E + I E+ + A + E D P Sbjct: 226 ALIRLMAAPGPMPEPMNLGNAEEVSMLQIAREVVRVTGASVA-----IEFRPLPADDP-- 278 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R+ D + +GW + GL TV +++ Sbjct: 279 -RQRCPDLGFARERLGWRATTTLADGLAATVRYFI 312 >gi|256375600|ref|YP_003099260.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] gi|255919903|gb|ACU35414.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] Length = 320 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 49/336 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS LV +V+V+D L+ G+ +++ E ++ F+Q DI Sbjct: 1 MKLLVTGGAGYVGSVTAARLVESGH-EVVVLDDLS-TGHADAVPEGAE-----FVQADID 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D I L D IV+ AA+S V S++ ++ N++ + LL+ R + Sbjct: 54 D--AIGDVLAGGF-DGIVHCAAKSLVGESMVDPAKYWQGNVVTSLKLLDAMRAHGTP--- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG ++ E P P++ Y A+K + D+ + ++ +G+ + Sbjct: 108 ------RLVFSSTAATYGEPEQVPILETAPTRPTNTYGASKLAIDHAITSYAAAHGLAAV 161 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYV 226 ++ +G H E LIPL + + + + ++G DG VRD+++V Sbjct: 162 SLRYFNVAGAYGRFGERHAVETHLIPLVLQVALGKRESIKVFGDDWPTDDGTCVRDYIHV 221 Query: 227 EDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIR 282 D A L+ GE YN+G +GF ++ +I + + + Sbjct: 222 LDLADAHMKALEHATAGEHRIYNLGNG-----------LGFSVNQVIEACREVTGHAIPA 270 Query: 283 FIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGL 317 ++ R D I SS + ++E+GW P+ SG+ Sbjct: 271 VVDGRRAGDPAVLIASSERARTEMGWKPERADLSGI 306 >gi|161502739|ref|YP_001569851.1| hypothetical protein SARI_00789 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864086|gb|ABX20709.1| hypothetical protein SARI_00789 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 375 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SN-LFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q SN F D Sbjct: 8 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSSNPKFHLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 67 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 123 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 240 Query: 235 LVLKK 239 ++L++ Sbjct: 241 MMLQQ 245 >gi|308196342|gb|ADO17520.1| GDP-D-mannose-4,6-dehydratase [Schistosoma mansoni] Length = 363 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 17/246 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS-----FLQV- 57 ++TG G GS L +L++ + V I + + N + I + N FS FL Sbjct: 17 LITGITGQDGSYLAEFLLS-MNYIVHGIIRRSSTFNTGRVNHIYEKNKFSCEKTFFLHYG 75 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + + PD I N AA+SHV S F + G + L RL + Sbjct: 76 DMTDSSSLIKVISKVMPDEIYNLAAQSHVKVS------FDLSEYTGEVVALGTLRLLDAI 129 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + +F Q S+ E+YG + + SE P+ P SPYS K + ++V+ + +YG+ Sbjct: 130 RTCKLEKTVKFYQASSSELYGKVVETPQSEKTPFYPRSPYSVAKLYAYWIVVNYRESYGM 189 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ +G +V G+ + RDW + D+V+A+ Sbjct: 190 FACNGILFNHESPRRGETFVTRKITRAVVRIKKGLQNVLELGNLNSERDWGFAGDYVKAM 249 Query: 234 YLVLKK 239 +L+L++ Sbjct: 250 WLMLQR 255 >gi|294497874|ref|YP_003561574.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294347811|gb|ADE68140.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 316 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 21/231 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GFIGS + L + +V VID L+ G + +L ++ SF DI Sbjct: 3 RVLVTGGCGFIGSHMAELLYQN-GFEVKVIDNLS-TGKIANL----ENRGISFHYGDIVS 56 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + EF+P +V+ AA+ V S+ NI GT ++ + Sbjct: 57 EE-LDKVFAEFKPHYVVHQAAQVSVAHSVTNFHHDANVNIQGTINIINACK--------- 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK-ASSDYLVLAWGHTYGIPVL 180 K + + S+ VYG+ + + P +P+SPY +K S +YL LA Y I + Sbjct: 107 KHGAEKIIFASSAAVYGNTNVTPITLTHPTSPASPYGLSKFTSEEYLKLAK-QLYDIDYV 165 Query: 181 LSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + SN YGP + +I + R + +YG G+ RD++YVED Sbjct: 166 ILRYSNVYGPRQNSQGEGGVISIFFDRFVTNQQPIIYGSGRQTRDFIYVED 216 >gi|197264555|ref|ZP_03164629.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242810|gb|EDY25430.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 373 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|218890650|ref|YP_002439514.1| wbpP [Pseudomonas aeruginosa LESB58] gi|218770873|emb|CAW26638.1| wbpP [Pseudomonas aeruginosa LESB58] Length = 340 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 95/341 (27%), Positives = 146/341 (42%), Gaps = 42/341 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ +L E+ Q + F F+Q Sbjct: 19 LITGVAGFIGSNLLETLLK-LDQKVVGLDNFA-TGHQRNLDEVRSLVSEKQWSNFKFIQG 76 Query: 58 DI-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI C+ C D +++ AA V RSI TNI G +L R Sbjct: 77 DIRNLDDCNNACAGV-------DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 129 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 D K Q F ++ YG ED P SPY+ TK ++ + Sbjct: 130 --------DAKVQ-SFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 YG + N +G P +IP + MI+G V++ GDG+ RD+ Y+E+ Sbjct: 181 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN 240 Query: 229 HVRALYLVLKKG--RIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+A L G + YNI GG R +++ +F L D L S+ + Sbjct: 241 TVQANLLAATAGLDARNQVYNIAVGG---RTSLNQLFFA--LRDGLAENGVSYHREPVYR 295 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + R G R D SK +G+ P+ ++ +G+ + WY+ Sbjct: 296 DFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI 336 >gi|159491066|ref|XP_001703494.1| UDP-D-glucuronic acid decarboxylase [Chlamydomonas reinhardtii] gi|158280418|gb|EDP06176.1| UDP-D-glucuronic acid decarboxylase [Chlamydomonas reinhardtii] Length = 328 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 140/327 (42%), Gaps = 35/327 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC YLV V+ +D N I + N F ++ D+ Sbjct: 20 RVLVTGGAGFVGSHLCDYLVARGD-HVICLDNFFTGSKENIAHLIGKPN-FEVIRHDV-- 75 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L E D I + A + + T+ +GT + L Sbjct: 76 ---VEPILLEV--DQIFHCACPASPIHYKYNPIKTAKTSFLGTM----------NMLGLA 120 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + RFL ST EVYG + E P S Y K ++ L + + + Sbjct: 121 KRCKARFLITSTSEVYGDPLEHPQRETYWGNVNPIGERSCYDEGKRVAETLTMDYYREHN 180 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V + N YGP + +++ +++ + + +YGDGQ R + YV D V+ L Sbjct: 181 LQVRIVRIFNTYGPRMALDDGRVVSNFVSQALTNKPITVYGDGQQTRSFQYVSDLVKGLV 240 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 V+ IG +NIG E +++ + + + PK+ +I + E+ + Sbjct: 241 TVMDGPEIGP-FNIGNPGEFTMLELA---NLVKEVVNPKA-----VIEYRENTADDPKCR 291 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K+K+ +GW P + GL + V Sbjct: 292 KPDITKVKTTLGWEPVVPLREGLERMV 318 >gi|32455987|ref|NP_861989.1| rb114 [Ruegeria sp. PR1b] gi|22726339|gb|AAN05135.1| RB114 [Ruegeria sp. PR1b] Length = 382 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 46/336 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN----LNSLKEISQSNL--FSF 54 +R +V GG GFIGS V+D L AG L+ E ++ + + Sbjct: 69 VRALVIGGCGFIGSH--------------VVDVLHQAGMGLRVLDRRPEAFRAPVPGVEY 114 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + D+ DR + A+ DA+V+ A+ + S L ++ N++ T LLE R Sbjct: 115 VYCDMQDRAQLFEAVSGV--DAVVHLASTTVPATSNLDPVADVSGNLVTTLSLLEVMR-- 170 Query: 115 WSCLSQDKKDQFRFLQISTD-EVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 R + +S+ VYG + L SED P NP S Y K + + + Sbjct: 171 -------AAGVRRMVYLSSGGTVYGVPQQDLVSEDHPLNPISSYGIVKVAVEKYLFMEHQ 223 Query: 174 TYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 +G+ ++ SN YGP + + LI + R+ + ++GDG VRD+L+V D Sbjct: 224 LHGLEYVVLRASNPYGPRQGHRGIQGLIGTHLWRLSRQEEIEVWGDGSIVRDFLHVRDLA 283 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + L + G+ G +N G ++V +I + A +S + +PG Sbjct: 284 QLCLLAMTSGKSGI-FNAGRGQGASVAEVVEQICATVAASGGRSVAPIY-------KPGR 335 Query: 291 D---RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + R +D+++ ++E+GW + ++ G+ +T W Sbjct: 336 NFDVPRVVLDTTRARAELGWQAEITLQDGIAETWDW 371 >gi|318060740|ref|ZP_07979463.1| UDP-glucose 4-epimerase [Streptomyces sp. SA3_actG] gi|318077507|ref|ZP_07984839.1| UDP-glucose 4-epimerase [Streptomyces sp. SA3_actF] Length = 323 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 147/355 (41%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAG+IG+ + R L + V+V D L+ G L E S L Sbjct: 1 MTWLVTGGAGYIGAHVVRVLAG-AGVPVVVFDDLS-TGEAARLPEGVPLETGSVL----- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + L E + +++ A + V S+ + N+ G +LLE R Sbjct: 54 DRARLDAVLGEHRVTGVLHIAGKKQVAESVERPLHYYRENVEGLRVLLEAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG + L +ED P P SPY TK ++L+ YG+ + Sbjct: 106 -AAGVDRLVFSSSASVYGVPEPELVTEDTPCLPISPYGETKLIGEWLLRDASVAYGLRTI 164 Query: 181 LSNCSNNYGPYHFP-------EKLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G P L+PL R+ G ++G DG VRD+++V+ Sbjct: 165 ALRYFNVVG-AGLPGLADKGAANLVPLIFERVDAGRPPLVFGDDYDTPDGTCVRDYVHVQ 223 Query: 228 DHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI- 281 D A ++ I R NIG ++++ + K+ T+L+ Sbjct: 224 DIAEAHLAAARRLDEAPEGIALRLNIGRGEGSSVLEMIER--------VLKTTGRTDLVP 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW-WRPLY 335 + RPG R + I++E+GW + GL++ + ++ W WR L+ Sbjct: 276 EVVPRRPGDAARCVASADAIRAELGW----SARYGLDEMI----ESAWQGWRHLH 322 >gi|226311333|ref|YP_002771227.1| CDP-glucose 4,6-dehydratase [Brevibacillus brevis NBRC 100599] gi|226094281|dbj|BAH42723.1| CDP-glucose 4,6-dehydratase [Brevibacillus brevis NBRC 100599] Length = 363 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 80/340 (23%), Positives = 157/340 (46%), Gaps = 31/340 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TG GF G+ LC +L +DL +V L+ N + + S+L + D+ Sbjct: 11 KVLITGHTGFKGAWLCLWL-HDLGAKVTGY-ALSPPTNPSIFECAQISSLVDSIIDDVRS 68 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E ++ A+ + PD I++ AA+ V S E N++GT +LE R+ QD Sbjct: 69 KESVQKAINQANPDIIIHMAAQPLVRLSYQYPAETFEINVMGTVNVLEAARV----AVQD 124 Query: 122 KKDQFRFLQISTDEVYGSLD--KGLFSEDMPYNPSSPYSATKASSDYLVLAWG------- 172 + ++TD+VY + + G +D+ PYS +KA S+ + ++ Sbjct: 125 GMKIKAIINVTTDKVYENREWVWGYREQDV-LGGYDPYSNSKACSEQVTASYRNAFFHPD 183 Query: 173 --HTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 H +G+ V + N G + ++LIP ++ +I+G + + + + +R W +V + Sbjct: 184 QYHQHGVAVATARAGNVIGGGDWAMDRLIPDCLSALIKGETIVIR-NPKAIRPWQHVLEP 242 Query: 230 VRALYLVLKK----GR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 ++ ++ +K G+ E +N G N E + +++ L + + Sbjct: 243 LKGYLMLAEKMWANGKDYSESWNFGPNEEDAR-----SVEWIVRQLCERWGAGARFEAER 297 Query: 285 EDRPGHDRRY-AIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + H+ +Y +D SK K IGW P ++E L+ + W Sbjct: 298 TEPQWHEAKYLKLDCSKAKGVIGWKPNWSLEQTLDSIISW 337 >gi|163782189|ref|ZP_02177188.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] gi|159882721|gb|EDP76226.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] Length = 332 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 59/337 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MR++VTGGAG+IGS + + L+ + +VL D L+ + + L+ L V D+ Sbjct: 8 MRVLVTGGAGYIGSHMVK-LLGERGYEVLTYDNLSTGHDW--------AVLYGRLVVGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 ++ +R EF+PDA+++FAA V S+ ++ N++ T LLE + Sbjct: 59 AYKDKLREVFGEFKPDAVMHFAAYIVVPESVREPLKYYRNNVVNTINLLE-------VME 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-------------- 165 + D+F F S+ VYG +K SE P NP +PY TKA+ + Sbjct: 112 EFGVDKFIFS--SSAAVYGIPEKIPVSEGAPLNPINPYGETKATVERILRDLSNSGKDFR 169 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYG-PYHFPEKLIPLAI-TRMIEGSHVFLYG------DG 217 Y+ L + + G ++ G Y P LI A+ T E + +YG DG Sbjct: 170 YVSLRYFNVAG-----ADPEGKIGFAYPNPTHLIIRAVKTAKGEFERLEIYGTDYPTPDG 224 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 +RD+++V D H+ AL +L+ G+ + +N G + V E+ + + + Sbjct: 225 TCIRDYIHVVDLADAHIVALEYLLEGGQ-SDVFNCGYGHGYS----VKEVVETVKRVTGR 279 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + E R R G DS KI+ +GW P+ Sbjct: 280 DFKVVEAPR----REGDPPVLVADSKKIRERLGWEPK 312 >gi|312867375|ref|ZP_07727584.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] gi|311097076|gb|EFQ55311.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] Length = 332 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 50/348 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LVN+ + +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLV-TGHRAAVHPDA-----VFYQGDLA 54 Query: 61 DRECIRSALKEFQPD-AIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWWS 116 D++ +R+ KE A+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRTVFKEHADIYAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYI 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 S ST YG ++ E P P +PY +K + ++ YG Sbjct: 115 VFS------------STAATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYG 162 Query: 177 I---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNV 220 I P+ N + + G H PE + + ++ +G + ++G DG NV Sbjct: 163 IKYVPLRYFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKISIFGDDYQTPDGTNV 222 Query: 221 RDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++ D A L L+ G +N+G + N+ IV K H Sbjct: 223 RDYVHPFDLADAHLLAVEYLRNGNPSTAFNLGSSTGFSNLQIV--------EAARKVTGH 274 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K + +GW P+ +N+E+ + W+ Sbjct: 275 PIPLELADRRPGDPDTLIAFSEKARDILGWQPKFDNIETIIQTAWAWH 322 >gi|259047348|ref|ZP_05737749.1| UDP-glucose 4-epimerase [Granulicatella adiacens ATCC 49175] gi|259035970|gb|EEW37225.1| UDP-glucose 4-epimerase [Granulicatella adiacens ATCC 49175] Length = 335 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 92/354 (25%), Positives = 150/354 (42%), Gaps = 50/354 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L + V+++D + + LN LK I+ + F + D Sbjct: 1 MAILVTGGAGYIGSHTVIEL-DKAGFDVVIVDNFSNSSPEVLNRLKTITGKD-FPLYEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ + + ++ D++++FA V S+ E+ NI GT +LL+ R Sbjct: 59 ILDRDFLVTVFEKENIDSVIHFAGFKAVGESVEKPLEYYHNNITGTLVLLDVMR------ 112 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV------- 168 QF I S+ VYG + F E+MP + ++PY TK + ++ Sbjct: 113 ------QFNVKDIVFSSSATVYGMNNVVPFKEEMPTSATNPYGYTKVMLEQILNDVAFSD 166 Query: 169 LAWGHT---YGIPVLLSNCS-NNYGPYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 W T Y P+ P P L+P IT++ G FL +G D Sbjct: 167 SNWSVTNLRYFNPIGAHESGLIGEAPNGIPNNLMPY-ITQVAVGKREFLSVFGDDYDTHD 225 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G VRD+++V D R L +K N K ++ IG+ + L+ + Sbjct: 226 GTGVRDYIHVVDLARGHVLAVK--------NNAAQKGAKVFNLGTGIGYSVLDLVKAFIA 277 Query: 277 HTEL---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 E+ + R G D+SK K +GW ++N+ + + W N Sbjct: 278 ENEVDIPYKIAPRRAGDIATCYADASKAKEVLGWVTEKNLNDMVRDSWNWQKKN 331 >gi|229151702|ref|ZP_04279903.1| CDP-abequose synthase [Bacillus cereus m1550] gi|229194075|ref|ZP_04320953.1| CDP-abequose synthase [Bacillus cereus ATCC 10876] gi|228589401|gb|EEK47342.1| CDP-abequose synthase [Bacillus cereus ATCC 10876] gi|228631763|gb|EEK88391.1| CDP-abequose synthase [Bacillus cereus m1550] Length = 319 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 24/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + ++DI D+ Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQAKIVLFIRTPSNSWRLKDILK--YIETYEIDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TN+IGT +++ +L +C Sbjct: 65 KQVQDAIKKINPDYIFHLAAYG-VNSAHTDYIHAIETNVIGTCNIIQAAKL-VNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENNINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I R+++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGEGEEPHKIFSYIILRVLQNKDVNLTLCNQ-LRDYCYIENVIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + L L S + I R D KI Sbjct: 233 QNEIFNIGSGTIH---PLKHYVELLFKHLKTNSRPNYGA---ISSRTNERWVPEADVQKI 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ N+E G+ KT+ WY +N Sbjct: 287 KNSLSWEPRINIEEGIIKTINWYKNN 312 >gi|217963421|ref|YP_002349099.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290892640|ref|ZP_06555632.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|217332691|gb|ACK38485.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290557700|gb|EFD91222.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|307572004|emb|CAR85183.1| galE [Listeria monocytogenes L99] Length = 327 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 149/333 (44%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MSIVVLGGAGYIGSHAVDELITR-GYEVVVIDNLR-TGHKESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ D +++FAA S V S+ ++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKETVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A +S + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARSVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|148642387|ref|YP_001272900.1| UDP-glucose 4-epimerase (NAD dependent) [Methanobrevibacter smithii ATCC 35061] gi|148551404|gb|ABQ86532.1| UDP-glucose 4-epimerase (NAD dependent) [Methanobrevibacter smithii ATCC 35061] Length = 309 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 156/331 (47%), Gaps = 31/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGG GFIGS + L+ D V +ID L+ +G + +LK + NL + ++ ++ D Sbjct: 5 NIIITGGLGFIGSHIADELIEDN--NVTIIDNLS-SGKVENLKNPAHENL-TIIKNNLND 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I + AA + V S+ + N+ T +L + +Q+ Sbjct: 61 MNLDETFA---DTDYIFHLAAMASVPLSVNDPIKCNDNNVNSTI------KLLTAAKNQN 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + + S+ VYG+ E P+SPY+A+KA+ + + A+ +YG+ + Sbjct: 112 VK---KVIFSSSSAVYGNNANMPLKESELMMPTSPYAASKANCELYLQAFEESYGLKSIA 168 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP +IP I ++ H +YGDGQ RD+++V+D +A Sbjct: 169 LRYFNVFGPKQDKNSQYAAVIPNFIDAILNNEHPIIYGDGQQTRDFIFVKDVAKANIAAA 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G NI E+ ++ ++EI + D++ S E + +++ R G D ++I Sbjct: 229 ESNYTGP-VNI-ATGEKLTVNRLYEI--IADSM----ESDLEPV-YVDKRKG-DIEHSIA 278 Query: 298 SSKIKSEIGW-FPQENMESGLNKTVCWYLDN 327 SEI + N E +N+T+ W+ +N Sbjct: 279 DIDKMSEINFKADSSNFEKQINETIQWFKEN 309 >gi|307595124|ref|YP_003901441.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307550325|gb|ADN50390.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 324 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 94/355 (26%), Positives = 149/355 (41%), Gaps = 49/355 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS L LV + V+VID L+ +G+LN LKE+ Sbjct: 2 MRVLITGGAGFIGSFLTEKLV-ERGFDVIVIDNLS-SGDLNRLKEV-------------I 46 Query: 61 DR-ECIRSALKE------FQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DR + +R LK FQ D + + AA V S+ N++ TF +LE +R Sbjct: 47 DRVKFVRDDLKSLGNPGVFQGVDTVFHLAANPEVRISVTEPKIHFDENVLATFNVLELSR 106 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 K + S+ VYG ED P P S Y A KA+ + + + Sbjct: 107 ---------KYGVKTVVYASSSTVYGDAKTIPTPEDHPIQPISVYGAAKAAGEIMCGTYA 157 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV-- 230 YGI + +N GP + L + S + + GDG + +LY+ D + Sbjct: 158 RLYGINCVTLRYANIVGPRLRHGVIYDLLMKLKRNPSELEVLGDGTQEKSYLYITDTIDA 217 Query: 231 --RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 +A +K G YN+ GN + ++ + I + + P+ ++ P Sbjct: 218 TLKAWEYAMKNGGT-YTYNV-GNWDSISVGDIVNIVIKVSGMNPR-VTYKPATPDGRGWP 274 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKELKPDND 343 G +R + +I E+GW P + + T + L +EL +ND Sbjct: 275 GDVKRMLLSIERIVKEVGWRPSMSSREAIELTA----------KSLAEELGVNND 319 >gi|298388258|ref|ZP_06997769.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] gi|298258984|gb|EFI01897.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 1_1_14] Length = 247 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ + L + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 28 VRDMKKDRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 87 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 88 GTLRMLEAVRI----LGMEKKT--RIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 141 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 142 YGFWITKNYRESYGMYAVNGILFNHESERRGE-TFVTRKITLAAARIAQGLQDKLYLGNL 200 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 ++RDW Y +D+V ++L+L+ Sbjct: 201 NSLRDWGYAKDYVECMWLILQ 221 >gi|222444410|ref|ZP_03606925.1| hypothetical protein METSMIALI_00021 [Methanobrevibacter smithii DSM 2375] gi|222433975|gb|EEE41140.1| hypothetical protein METSMIALI_00021 [Methanobrevibacter smithii DSM 2375] Length = 309 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 156/331 (47%), Gaps = 31/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGG GFIGS + L+ D V +ID L+ +G + +LK + NL + ++ ++ D Sbjct: 5 NIIITGGLGFIGSHIADELIEDN--NVTIIDNLS-SGKVENLKNPAHENL-TIIKNNLND 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I + AA + V S+ + N+ T +L + +Q+ Sbjct: 61 MNLDETFT---DTDYIFHLAAMASVPLSVNDPIKCNDNNVNSTI------KLLTAAKNQN 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + + S+ VYG+ E P+SPY+A+KA+ + + A+ +YG+ + Sbjct: 112 VK---KVIFSSSSAVYGNNANMPLKESELMMPTSPYAASKANCELYLQAFEESYGLKSIA 168 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP +IP I ++ H +YGDGQ RD+++V+D +A Sbjct: 169 LRYFNVFGPKQDKNSQYAAVIPNFIDAILNNEHPIIYGDGQQTRDFIFVKDVAKANIAAA 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G NI E+ ++ ++EI + D++ S E + +++ R G D ++I Sbjct: 229 ESNYTGP-VNI-ATGEKLTVNRLYEI--IADSM----ESDLEPV-YVDKRKG-DIEHSIA 278 Query: 298 SSKIKSEIGW-FPQENMESGLNKTVCWYLDN 327 SEI + N E +N+T+ W+ +N Sbjct: 279 DIDKMSEINFKADSSNFEKQINETIQWFKEN 309 >gi|198284672|ref|YP_002220993.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665959|ref|YP_002427344.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249193|gb|ACH84786.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518172|gb|ACK78758.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 339 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 19/243 (7%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG G G+ L ++L+ D + L+ + T L E+ ++ L D+ D Sbjct: 6 LITGITGQDGAYLAQWLLEKDYTVYGLIARRGT--DTTGRLHELGIADQVRLLDGDLIDL 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFI--LLEETRLWWSCLSQ 120 + A+++ Q + N A+S V S +T + GT + +LE R+ Sbjct: 64 SSMIRAMEKSQATEVYNLGAQSFVATSW--DQPILTAEVTGTSVVKMLEAIRI------- 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 Q RF Q ST E++G + + L SE P++P SPY K ++ + + ++G+ Sbjct: 115 -VNPQARFYQASTSEMFGQIQEPLQSERTPFHPRSPYGVAKLYGHWITVNYRESFGLHAS 173 Query: 181 LSNCSNNYGPYH---FPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALYLV 236 N+ P F + I LA+ R+ +G V G+ + RDW Y D+VRA++L+ Sbjct: 174 SGILFNHESPLRGTEFVTRKITLALARIRQGVQDVLELGNLDSKRDWGYAGDYVRAMWLM 233 Query: 237 LKK 239 L++ Sbjct: 234 LQQ 236 >gi|225620655|ref|YP_002721913.1| NAD-dependent epimerase/dehydratase [Brachyspira hyodysenteriae WA1] gi|225215475|gb|ACN84209.1| NAD-dependent epimerase/dehydratase [Brachyspira hyodysenteriae WA1] Length = 312 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 87/340 (25%), Positives = 148/340 (43%), Gaps = 49/340 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+IVTGGAGF+GS LC L+N+ V+ ID + G++ ++K + + F ++ DI + Sbjct: 3 RIIVTGGAGFLGSHLCERLLNEGNY-VISIDNF-FTGSIENIKHLLDNKNFESIRHDITE 60 Query: 62 R---ECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWW 115 EC D I NFA + H R+ + T++ G +L R Sbjct: 61 PIHIEC----------DEIYNFACPASPIHYQRNPIHT---FKTSVFGILNMLNLAR--- 104 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLA 170 +C + R LQ ST EVYG + E P S Y K S++ L++ Sbjct: 105 NCNA-------RILQASTSEVYGDPLEHPQRESYWGHVNPNGIRSCYDEGKRSAETLMMD 157 Query: 171 WGHTYGIPVLLSNCSNNYGPY--HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 + Y + + N YGP F +++ I + ++ + +YGDG R + Y +D Sbjct: 158 YHREYNTDIKIIRIFNTYGPRMNEFDGRVVSNFIIQALKNMPITVYGDGSQTRSFCYCDD 217 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + ++ N+G E ++ +I I + S +E++ +D P Sbjct: 218 LIEGAVKMMNSENFIGPVNLGNTAEMTVLEFAQKI-------IEMTNSKSEIV--YKDLP 268 Query: 289 GHDR-RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D + + + K ++ W P+ +E GL T+ Y DN Sbjct: 269 KDDPIKRQPNITLAKEKLNWHPEYKLEDGLKNTI-EYFDN 307 >gi|218134548|ref|ZP_03463352.1| hypothetical protein BACPEC_02451 [Bacteroides pectinophilus ATCC 43243] gi|217989933|gb|EEC55944.1| hypothetical protein BACPEC_02451 [Bacteroides pectinophilus ATCC 43243] Length = 356 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 44/349 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVN----------DLKIQVLVIDKLTYAGNLNSLKEISQSNL 51 R+++TG GF GS LCR LVN + + D G +NS+ Sbjct: 14 RVLITGHTGFKGSWLCRILVNAGAVVTGYSLEPPTNPALFDMCGLEGKMNSVIG------ 67 Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 DI D E ++ A + QP+ +++ AA+ V S TN++GT + E Sbjct: 68 ------DIRDSEHLKEAFAKAQPEIVLHLAAQPIVRDSYKNPVYTYETNVMGTVNICE-- 119 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLA 170 C+ Q+ + FL ++TD+VY + + + ED P + PYS +K+ S+ + + Sbjct: 120 -----CVRQNACVK-SFLNVTTDKVYENKEWVWGYREDEPLDGYDPYSNSKSCSELVTHS 173 Query: 171 WGHTY----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 + +++ + V + N G F ++++P G+ + + + + R + + Sbjct: 174 YKNSFFNDMDVAVSTARAGNVIGGGDFANDRIVPDCARASFAGTPIVVR-NPHSTRPYQH 232 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK----SYSHTELI 281 V + + A YL++ K + ++ G N + G L+D S I Sbjct: 233 VLEPL-AAYLMIAKAQYEDKKYQGYYNVGPDESDCVTTGRLVDTFCEAWNKVSDKKASWI 291 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY--LDNN 328 + P +D SK+KS GW P+ N + +N++V WY DNN Sbjct: 292 NKYDGGPHEANFLKLDCSKLKSTFGWKPRWNFDEAINRSVEWYNVYDNN 340 >gi|299139012|ref|ZP_07032189.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298599166|gb|EFI55327.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 316 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 93/335 (27%), Positives = 145/335 (43%), Gaps = 46/335 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTG AGF+GS LC L+ + VL +D L GN +L+ ++ F F ++DIC Sbjct: 6 ILVTGAAGFLGSHLCDALLAEGN-DVLGVDNLC-TGNPANLEHLAGETRFRFEELDIC-- 61 Query: 63 ECIRSALKEF---QPDAIVNFAA-ESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 K F + D + NFA+ S VD LG I T ++G+ L L Sbjct: 62 -------KPFDLGRVDFVFNFASPASPVDYMRLG----IETLLVGSAGTLNTLELA---- 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 KK +L ST E YG + E P P S Y K S+ V A+ Sbjct: 107 ---KKYGAGYLHASTSECYGDPEVHPQVESYWGNVNPIGPRSVYDEAKRFSEAAVAAYHR 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G+ L N YGP ++I + + + G + +YGDG R + Y D + Sbjct: 164 YHGVNTHLVRIFNTYGPRLQANDGRVISNLMMQALRGEALTIYGDGSQTRSFCYCSDLIE 223 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPG 289 + + L K NIG E ++ EI L+ SH E+ +D P Sbjct: 224 GI-VRLAKSDEHLPTNIGNPVEWTILECAKEIQALVG-------SHCEIAFQPLPQDDP- 274 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D +K ++ +GW P+ + GL K++ ++ Sbjct: 275 --KQRKPDITKARTLLGWEPKVPLREGLAKSLDYF 307 >gi|126741097|ref|ZP_01756779.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. SK209-2-6] gi|126717861|gb|EBA14581.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. SK209-2-6] Length = 344 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 84/357 (23%), Positives = 155/357 (43%), Gaps = 58/357 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQV 57 R+++TG AGFIG L R L+ + +V D +T Y L + + Q FS + Sbjct: 10 RVLITGTAGFIGFHLARLLLAE-GFRVHGFDGMTDYYDVTLKQRRHGMLLQHGNFSATEG 68 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + D +F PD IV+ A ++ V S+ +I +NI GTF ++E R Sbjct: 69 MLEDNALFDQMADDFAPDVIVHLAGQAGVRYSLENPRSYIDSNITGTFNVMEAAR----- 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLA 170 + + L ST VYG+ +E+MP+ + + Y+ATK + + + + Sbjct: 124 ----RLEVQHLLMASTSSVYGA------NEEMPFVETEKADTQLTIYAATKKAGESMGHS 173 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 + H + +P + YG + P+ + + +++ + +Y G+ RD+ YV+D V Sbjct: 174 YAHLWNLPTTMFRFFTVYGTWGRPDLALYKFVDAILDERPIDIYNHGEMYRDFTYVDDLV 233 Query: 231 RALYLVLKKGRIGER---------------------YNIGGNNERKNIDIVFEIGFLLDA 269 RA+ L++ + ER NIG +++ + +D V DA Sbjct: 234 RAIRLLIDT--VPERPATRAEIPSWDSLSPVAPYRVVNIGNSDKVRLLDFV-------DA 284 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 I + + ++E + G ++ + + G+ PQ + G+ V W+ D Sbjct: 285 -IEAALGKKAIRNYMEIQKGDVPATWANADLLNNLTGYRPQTDFREGIACFVDWFRD 340 >gi|313667391|ref|YP_004047675.1| UDP-glucose 4-epimerase [Neisseria lactamica ST-640] gi|313004853|emb|CBN86279.1| UDP-glucose 4-epimerase [Neisseria lactamica 020-06] Length = 338 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 93/372 (25%), Positives = 157/372 (42%), Gaps = 85/372 (22%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M +++TGG GFIGS LV +++D L + A L L++I+ N+ F Q D Sbjct: 1 MTVLITGGTGFIGSHTAVSLVQS-GYDAVILDNLCNSSAAVLPRLRQITGRNI-PFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ +R E + +++++FA V S+ ++ N+ G+ IL EE Sbjct: 59 IRDRQILRQIFSEHEIESVIHFAGLKAVGESVAEPMKYYGNNVSGSLILAEEMA------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVL-------A 170 + F+ + S+ VYG +K ++EDM P + ++PY A+KA + ++ Sbjct: 113 ---RAGVFKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPR 169 Query: 171 WGHTYGIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG--- 215 W V+L N G P P L+P I ++ G + ++G Sbjct: 170 WS------VILLRYFNPIGAHESGLIGEQPNGIPNNLLPY-ICQVASGRLPQLSVFGGDY 222 Query: 216 ---DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 DG +RD+++V D L +G I GG +F +G Sbjct: 223 PTPDGTGMRDYIHVMD--------LAEGHIAAMKAKGGVAGVH----LFNLGS------G 264 Query: 273 KSYSHTELIRFIEDRPGHDRRYAI-------------DSSKIKSEIGWFPQENMESGLNK 319 ++YS E+IR E G + Y I D S K E GW + + Sbjct: 265 RAYSVLEIIRAFEAASGLNIPYQIQPRRVGDLACSFADPSHTKQETGWETK--------R 316 Query: 320 TVCWYLDNNWWW 331 ++ ++++W W Sbjct: 317 SLAQMMEDSWHW 328 >gi|291288293|ref|YP_003505109.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM 12809] gi|290885453|gb|ADD69153.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM 12809] Length = 355 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 69/372 (18%) Query: 1 MRLIVTGGAGFIG--SALCRYLVNDLKIQVLVID-----KLTYAGNLNS--LKEISQSNL 51 M+++VTG AGFIG +AL L D I + I+ ++ Y NS +K I+ Sbjct: 1 MKILVTGTAGFIGHHTALKLALRGDDVIGLDNINDYYDVRVKYGRLKNSGIIKNIADGEF 60 Query: 52 FS--------------FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFI 97 F F+++++ DRE I + + DA+ + AA++ V SI +I Sbjct: 61 FPYAEPVRSSVYPTYRFVKINLEDRENITKLFETEKFDAVCHLAAQAGVRYSIDNPHAYI 120 Query: 98 TTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY------ 151 +NI G +LE SC K+ S+ VYG ++++P+ Sbjct: 121 KSNIDGFMNILE------SCRHTGVKN---LCFASSSSVYG------LNKEIPFKTSHSV 165 Query: 152 -NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH 210 +P S Y+ATK S++ + + H + I YGP+ P+ + + +EG Sbjct: 166 DHPISLYAATKKSNEMMAHTYSHLFDIHTTGLRFFTVYGPWGRPDMALFIFTKAALEGKP 225 Query: 211 VFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER----------------YNIGGNNER 254 + ++ +G+ RD+ Y++D V + VL + YNIG + Sbjct: 226 INVFNNGEMFRDFTYIDDIVEGVVRVLDNPAKPDADFNGTDPSTSSAPYKIYNIGNSVPV 285 Query: 255 KNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 +D + I L I K+ + +PG D+S + G+ P ++E Sbjct: 286 NLMDFIKAIEAKLGKTIEKN--------MMPIQPGDLHTTYADASDLTLHTGYKPSTSIE 337 Query: 315 SGLNKTVCWYLD 326 G+ + + WYLD Sbjct: 338 DGVGRFIDWYLD 349 >gi|75909558|ref|YP_323854.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703283|gb|ABA22959.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] Length = 355 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 91/360 (25%), Positives = 153/360 (42%), Gaps = 37/360 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++ GGAGFIGS+L L ++ D L G+ +L +S + F+ DI Sbjct: 4 RVLILGGAGFIGSSLAISLKQQHPSWKISCFDNLRRRGSELNLTRFKKSGI-EFIHGDIR 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-----ETRLWW 115 + + F D I++ +AE V + TN++GT +LE + RL + Sbjct: 63 SSSDLEPGM--FNIDTIIDCSAEPSVLAGFSSPQYVLQTNLLGTINVLELARQIDARLLF 120 Query: 116 SCLSQ----------DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASS 164 S+ + + L I+ ++ + +ED P S Y TK +S Sbjct: 121 LSTSRVYPIETLKSINLIESPTRLTIAPEQTISGVSNLGIAEDFPLQSYRSLYGTTKLAS 180 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF--------LYGD 216 + L+ + YGI +++ C GP+ + + + + +H F G Sbjct: 181 EMLIEEYRQAYGIQAIVNRCGVITGPWQMGK--VDQGVFVLWLAAHYFEKSLSYIGYGGT 238 Query: 217 GQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 G+ VRD L++ED +R + L+ G+ N+GG + N + E L +A+ KS Sbjct: 239 GKQVRDLLHIEDLLRLISYQLEHFSELGGDVLNVGGGAD--NSLSLLETTKLCEAITGKS 296 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL 334 + + R G Y DSSKI S+ GW P N E L W L+ + +P+ Sbjct: 297 ---IPIKSEVTARQGDIPIYITDSSKIISKTGWKPTMNPEQTLRDIYSWILEYEEFLQPI 353 >gi|146276632|ref|YP_001166791.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] gi|145554873|gb|ABP69486.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] Length = 328 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 35/255 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDIC 60 R++VTGGAG+IGS C+ L + + D L+ Q+ F L + D+ Sbjct: 4 RVLVTGGAGYIGSHACKVL-KRAGFEPVTFDNLSTG--------WEQAVRFGPLARGDLM 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I +AL+E++P A+++FAA S V S+ + N+ G LLE T ++Q Sbjct: 55 DRASIDAALEEWKPVAVMHFAALSLVGESMRDPATYWRVNVNGALNLLEAT------VAQ 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 K+ F+ ST YG D + ED P P + Y A+K + + ++ +G ++G+ Sbjct: 109 GVKN---FVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMLANFGASFGLNHT 165 Query: 178 -----PVLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V ++ G H PE LIPL + + + + ++G DG +RD++ Sbjct: 166 IFRYFNVAGADPEGEAGEQHEPETHLIPLMLDAVAGKRPALTVFGTDYPTRDGTCIRDYV 225 Query: 225 YVEDHVRALYLVLKK 239 +V D +A L L + Sbjct: 226 HVMDLAQAHVLGLNR 240 >gi|331002839|ref|ZP_08326353.1| hypothetical protein HMPREF0491_01215 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413328|gb|EGG92696.1| hypothetical protein HMPREF0491_01215 [Lachnospiraceae oral taxon 107 str. F0167] Length = 314 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 14/235 (5%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAGFIGS L L+ + +V+ ID + G +++ + + F+F + ++C Sbjct: 1 MKVLVAGGAGFIGSHLIDSLLAEGN-EVVCIDNF-FIGTKENIEHLMDNPKFTFYEQNLC 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + + ++ + + + + AA S + S TF LL+ R Sbjct: 59 DREKLEAVFEKEKFEYVFHLAANSDIQASANDPSIEYENTYSTTFELLQAMR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMP-YNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D +F ST VYG + SED P P S Y A K S+ ++ A+ + I Sbjct: 111 -KYDVKKFFFASTSAVYGEKEGKNVSEDEPNLRPISYYGAAKLGSEAIISAYSYMNDIKA 169 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRM-IEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 L+ N GP +I + R+ ++ SH+ + GDG + ++YV D V A+ Sbjct: 170 LIFRFPNVIGP-RLTHGVIFDFVKRLKVDPSHLRILGDGTQCKPYVYVLDLVEAI 223 >gi|86748650|ref|YP_485146.1| GDP-mannose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gi|86571678|gb|ABD06235.1| GDP-mannose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 360 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 28/340 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV-D 58 ++TG G G+ L YL+ L V + + + + N + + Q +N+ L D Sbjct: 11 LITGVTGQDGAYLAEYLLG-LGYTVHGVKRRSSSFNTGRIDHLYQDRHAANVPFLLHYGD 69 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N AA+SHV S + ++ IG LLE R+ L Sbjct: 70 MTDATNLIRLIQEIQPDEIYNLAAQSHVAVSFESPEYTANSDAIGVLRLLEAIRI----L 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + +E P+ P SPY+ K ++ + + YG+ Sbjct: 126 GMEKKT--RFYQASTSELYGLVQQIPQTEKTPFYPRSPYAVAKLYGYWITVNYREAYGMF 183 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I +I R+ G LY G+ RDW + +D++ ++ Sbjct: 184 ASNGILFNHESPIRGETFVTRKITRSIARIELGVENCLYLGNLDAKRDWGHAKDYIEGMH 243 Query: 235 LVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFL-------LDALIPKSYSHTELIRFI 284 +L+ + G R+ +++ F E+G LD + S+ ++R Sbjct: 244 KILQASEPDDFVLATGETRSVREFVEVAFSELGRSIEWQGQGLDEIGIDKASNKVVVRID 303 Query: 285 ED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + RP D++K + ++GW P+ + + V Sbjct: 304 ANYFRPTEVELLIGDATKAREKLGWTPKTTFAELVKEMVA 343 >gi|126732873|ref|ZP_01748664.1| UDP-glucose 4-epimerase [Sagittula stellata E-37] gi|126706649|gb|EBA05723.1| UDP-glucose 4-epimerase [Sagittula stellata E-37] Length = 327 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 38/292 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + +TY + ++ + F Q D+ DR Sbjct: 4 VLVTGGAGYIGSHACKAL------KAAGYTPVTYDNLVTGWQDAVK--FGPFEQGDLMDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++++P A+++FAA S V ++ + N+ G+ L+E + CL Sbjct: 56 ARLDEVFRKYEPAAVMHFAALSQVGEAMAKPGMYWRNNVCGSLTLIEAA-VEAGCLD--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 F+ ST YG D + E+ P P + Y A+K + + ++ +G YG+ Sbjct: 112 -----FVFSSTCATYGEHDNVVLDENTPQEPLNAYGASKRAVEDILRDFGAAYGLRHVIF 166 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL--------YGDGQNVRDWLY 225 V + G +H PE LIP+ + ++G L DG +RD+++ Sbjct: 167 RYFNVAGGDPEGEIGEHHRPETHLIPVML-EAVDGKRPALTVNGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 V D V A L LK G+ +N+G +++ G + +A +P S Sbjct: 226 VCDLVDAHVLGLKWLKDGKGSRVFNLGTGKGFSVREVITAAGTVTNAEVPCS 277 >gi|90961359|ref|YP_535275.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] gi|90820553|gb|ABD99192.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] Length = 331 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 53/358 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS L+ + + +V+D L G+ ++ + ++ F Q DI Sbjct: 1 MATLVLGGAGYIGSHTVDRLIEKGE-KTIVVDSLV-TGHRQAVNKDAK-----FYQGDIA 53 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R KE DA+++FAA S V S+ ++ N G LLE ++ Sbjct: 54 DKDFMRQVFKENSDIDAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLE-------VMN 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 + D+ F ST YG ++ E P NP +PY +K + ++ YGI Sbjct: 107 EFSIDKIVFS--STAATYGIPEEVPIKETTPQNPINPYGESKLMMEKIMRWADEAYGIKF 164 Query: 178 -PVLLSNCS-----NNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 P+ N + + G H PE L+P+ + M + + ++G DG N+RD+ Sbjct: 165 VPLRYFNVAGAKPDGSIGEDHMPETHLLPIVLQVAMGKRDKLQIFGDDYNTPDGTNIRDY 224 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D A L LK G +N+G + N +I L+A + ++ E+ Sbjct: 225 VHPLDLADAHILAVDYLKAGNPSTAFNLGSSTGFSNREI-------LEAA--RKVTNKEI 275 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I R G D + SS K + +GW PQ + + ++ W W L+ E Sbjct: 276 PAEIAPRRGGDPDVLVASSTKAREVLGWKPQFD-------DISKIIETAWKWHTLHPE 326 >gi|308070305|ref|YP_003871910.1| UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] gi|305859584|gb|ADM71372.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] Length = 329 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 143/330 (43%), Gaps = 48/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L+ DL +V+V+D L L + D+ Sbjct: 1 MAILVTGGAGYIGSHTVAELL-DLGEEVVVLDNLQTGHKAALLGG-------KLYEGDLR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + E DA+++FAA S V S+ ++ N+ GT LLE + Sbjct: 53 DKELLSKLFSENSIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMK-------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG +K E P++ Y TK + ++ + GI + Sbjct: 105 -DAGVRRIVFSSTAATYGEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYV 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + T + + H+ ++G DG VRD++ Sbjct: 164 SLRYFNAAGAHESGKIGEDHRPESHLIPLVLQTALKQRPHIAVFGEDYATPDGTCVRDYI 223 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HVRA+ L++G +N+ GN + ++ V E + L E+ Sbjct: 224 HVSDLADAHVRAVNY-LREGNDSNVFNL-GNGQGFSVKEVIETARKVTGL--------EI 273 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFP 309 E R D + SS K +S +GW P Sbjct: 274 PVVTEPRRAGDPAILVASSDKARSVLGWSP 303 >gi|157151274|ref|YP_001450225.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] gi|157076068|gb|ABV10751.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] Length = 333 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 44/345 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLITADKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S++ ++ N G LLE + C Sbjct: 55 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMHWADRAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH--VFLYG------DGQNVRDW 223 V + + G H PE + + ++ +G + ++G DG NVRD+ Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLSIVLQVAQGKRDKIAVFGDDYDTLDGTNVRDY 225 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D A L L+ G+ + +N+G + N+ IV K H Sbjct: 226 VHPFDLADAHILAVDYLRAGQQSDAFNLGSSTGFSNLQIV--------EAARKVTGHPIP 277 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 278 LEIAERRPGDPDTLIASSEKARKVLGWQPKFDNIETIIETAWKWH 322 >gi|145219430|ref|YP_001130139.1| GDP-mannose 4,6-dehydratase [Prosthecochloris vibrioformis DSM 265] gi|145205594|gb|ABP36637.1| GDP-mannose 4,6-dehydratase [Chlorobium phaeovibrioides DSM 265] Length = 371 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 152/357 (42%), Gaps = 39/357 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFL 55 + ++TG G GS L L+ +V I + + + N + + Q NLF Sbjct: 3 KALITGITGQDGSYLAELLLEK-GYEVHGIKRRSSSLNTERIDHLYQDPHSNHRNLFLHY 61 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D + + E +PD + N AA+SHV S + + +GT LLE R Sbjct: 62 G-DLSDSSNLTRLIAEIKPDEVYNLAAQSHVAVSFESPEYTADVDALGTLRLLEAIRF-- 118 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L +K RF Q ST E+YG + + E P+ P SPY+ K + ++ + + Y Sbjct: 119 --LGMEKT--CRFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAY 174 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 G+ N+ P F + I A+ + +G LY G+ +RDW + +D+VR Sbjct: 175 GMYACNGILFNHESPRRGETFVTRKITRALANISQGLEECLYMGNLDALRDWGHAKDYVR 234 Query: 232 ALYLVLKKGR-------IGERYNIGGNNERK----NIDIVFEIGFLLDALIPKSYSHTE- 279 +++L++ G +Y++ E+ I I +E + I S TE Sbjct: 235 MQWMMLQQEEPKDYVIATGVQYSVREFIEKAAGKLGISIRWEGEGKEEVGIVDGVSMTES 294 Query: 280 -------LIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++R RP D K K+++GW PQ ++ +++ V LD Sbjct: 295 ALRIGTPIVRIDPRYFRPAEVETLLGDPGKAKADLGWIPQITLDEMIDEMVAHDLDQ 351 >gi|327459775|gb|EGF06115.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1057] Length = 333 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 55 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---IMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADRAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 225 YVHPFDLADAHILAVEHLRAGNPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 322 >gi|152986904|ref|YP_001351555.1| oxidoreductase Rmd [Pseudomonas aeruginosa PA7] gi|150962062|gb|ABR84087.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas aeruginosa PA7] Length = 303 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 33/261 (12%) Query: 74 PDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQF--RFLQI 131 PDA+++ A ++ V S L N +GT LL+ K++ F FL I Sbjct: 53 PDAVIHLAGQTFVPDSFLDPRRTFEVNFLGTLSLLQAL----------KRNGFAGTFLYI 102 Query: 132 STDEVYGSLDKGLFS--EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYG 189 S+ +VYG + + E+ P +PY+ +K +++ L L WG + G VL++ N+ G Sbjct: 103 SSGDVYGQVPEAALPIHEEFLPRPRNPYAVSKLAAESLCLQWGISEGWRVLVARPFNHIG 162 Query: 190 PYHFPEKLIPLA---ITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGE 244 P +I A I RM +G +H GD RD+L V+D + A +L G G Sbjct: 163 PGQKDSFVIASAARQIARMKQGLQAHRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEPGA 222 Query: 245 RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPGHDRRYAIDSSK 300 YN+ E+K D+ I L D + EL ++D R RR ++ Sbjct: 223 VYNVCSGQEQKIRDL---IELLAD------IAQVEL-EIVQDPARMRRAEQRRVCGSHAR 272 Query: 301 IKSEIGWFPQENMESGLNKTV 321 ++ GW P+ ++ L + Sbjct: 273 LRDATGWKPEITIKQSLRAIL 293 >gi|300784321|ref|YP_003764612.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] gi|299793835|gb|ADJ44210.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] Length = 326 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 45/334 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++L+VTGGAG++GS +C + + QV V+D L+ G+ +++ ++ F++ D Sbjct: 8 LKLVVTGGAGYVGS-VCAARLVEAGHQVTVVDDLS-TGHADAVHPDAR-----FIEGDAA 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E S L+E D +++FAA+S V S+ ++ N++ + LLE + Sbjct: 61 --EVAGSLLREGF-DGVLHFAAKSLVGESMTEPAKYWEGNVVTSLRLLE---------AM 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R + ST YG ++ E P P++ Y ATK + D + ++ +G+ + Sbjct: 109 QEHGTPRLVFSSTAATYGEPEQSPIPETAPTRPTNTYGATKLAIDAAITSFAVAHGLAAV 168 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYGDG------QNVRDWLY 225 ++ +G H E LIPL + ++ G + ++GD VRD+++ Sbjct: 169 SLRYFNVAGAYGAFGERHTTETHLIPL-VLQVATGDRERIQIFGDDYPTPDHTAVRDYIH 227 Query: 226 VEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 V D A L LK GE YN+G ++++ + +P + + Sbjct: 228 VVDLADAHLLALKHATAGEHRIYNLGNGTGFSVLEVIEACREVTGHPVPAAVA------- 280 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 R G S + + E+GW P+ +G+ Sbjct: 281 -PRRAGDPSVLVAASDRAREELGWKPERTELAGI 313 >gi|262277586|ref|ZP_06055379.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HIMB114] gi|262224689|gb|EEY75148.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HIMB114] Length = 329 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 39/351 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD-R 62 +VTGGAGFIGS + L+ + K V V+D L N ++ L F+ +I + Sbjct: 6 LVTGGAGFIGSHVVDLLLKNKK-SVTVVDNLCTGRKKNI--QLKNKKL-KFVNCNIQNYS 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + + S K D +++ AA + + SI +E+ TN+ GT +L+ ++ + Sbjct: 62 KRLESIFKNI--DVVIHLAALADIVPSINHPEEYFQTNVNGTLNVLKASQ---------E 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + +F+ ++ YG DK E+ PY+ TK + LVL W Y + V Sbjct: 111 NNIKKFVYAASASCYGIPDKFPTDENTKIKLEYPYALTKKMGEDLVLHWSKVYKLNVTSL 170 Query: 183 NCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 N YG + + + + I + + GDG+ RD++YV D +A Y K Sbjct: 171 RLFNVYGTRSRTSGAYGAVFGVFLAQKINNKPLTVVGDGKQTRDFIYVSDVAKAFYKASK 230 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + G+ NIG E + F+ + + S I ++ RPG R + Sbjct: 231 YKKSGDIINIGSGKET-------TVDFIANFI-----SKNNKI-YLPKRPGEPDRSRANI 277 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR--PLYKELKPDNDYSKW 347 K + W P + +G+ LDN +W+ P++ + K W Sbjct: 278 IKAYKLLNWKPTIKIANGIQ----MLLDNINYWKNAPVWNKTKISKATKVW 324 >gi|110597112|ref|ZP_01385401.1| GDP-mannose 4,6-dehydratase [Chlorobium ferrooxidans DSM 13031] gi|110341303|gb|EAT59768.1| GDP-mannose 4,6-dehydratase [Chlorobium ferrooxidans DSM 13031] Length = 372 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 39/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 R ++TG G GS L L++ +V I ++ + N + + Q + Sbjct: 3 RALITGITGQDGSYLAELLLSK-GYEVHGIKRMASSFNTQRIDHLYQDPHVEHRTLILHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D I S + + QPD + N A+SHV S + N +GT LLE R Sbjct: 62 GDLTDSSNITSIIADVQPDELYNLGAQSHVAVSFKLPEYTANVNALGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + SE P+ P SPY+ K + + + + Y Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQETPQSETTPFYPRSPYAIAKLYAYWTTVNYREAYN 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A + +G LY G+ RDW + +D+VR Sbjct: 176 MFACNGILFNHESPRRGETFVTRKITRAFANITQGLEECLYIGNLNATRDWGHAKDYVRM 235 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGF---------LLDALIPKSYS 276 +++L++ G +Y++ + + F + F ++ ++ K S Sbjct: 236 QWMMLQQDEPKDYVIATGTQYSVRDFIRKAAAGLGFTLEFRGKGVEETGVVTSITDKDKS 295 Query: 277 HT-----ELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 H L+R RP + SK + ++GW PQ Sbjct: 296 HAVKTGDVLVRIDPRYFRPAEVETLLGEPSKARHDMGWVPQ 336 >gi|115525507|ref|YP_782418.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] gi|115519454|gb|ABJ07438.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] Length = 317 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 19/229 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGG G++G LCR L + + VLV+D+L Y N ++++ +L +Q D+ Sbjct: 1 MKILVTGGNGYVGRELCRQLYDSHR--VLVVDELRYGANRFCEDDLARLDL---IQADVS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +A++EF PD +++ AA ++ ++TN+ GT +L+ +C Sbjct: 56 DVRAM-AAVREFAPDVVIHLAAIHYIPECETNPALAVSTNVAGTVAMLQ------AC--- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 RF+ S+ VY D SE + P+ Y +K ++ V G P Sbjct: 106 --PPGCRFVFASSGAVYAP-DASPHSETEAATVPTDIYGLSKLQGEHYVRYIARARGFPA 162 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 ++ N GP L+P I ++ G+ G+ RD+++V D Sbjct: 163 VIVRLFNVVGPGETNPHLLPEIIAQLKAGNRSIRLGNLWPKRDYIHVRD 211 >gi|198284960|ref|YP_002221281.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665545|ref|YP_002427645.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249481|gb|ACH85074.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517758|gb|ACK78344.1| GDP-mannose 4,6-dehydratase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 343 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 27/247 (10%) Query: 4 IVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TG G G+ L ++L+ D + L+ + T L E+ ++ L D+ D Sbjct: 6 LITGITGQDGAYLAQWLLEKDYTVYGLIARRGT--DTTGRLHELGIADQVRLLDGDLIDL 63 Query: 63 ECIRSALKEFQPDAIVNFAAESHV----DRSILGADEFITTNIIGTFI--LLEETRLWWS 116 + A+++ Q + N A+S V D+ IL T + GT + +LE R+ Sbjct: 64 SSMIRAMEKSQATEVYNLGAQSFVATSWDQPIL------TAEVTGTSVVKMLEAIRI--- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 Q RF Q ST E++G + + L SE P++P SPY K ++ + + ++G Sbjct: 115 -----VNPQARFYQASTSEMFGQIQEPLQSERTPFHPRSPYGVAKLYGHWITVNYRESFG 169 Query: 177 IPVLLSNCSNNYGPY---HFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRA 232 + N+ P F + I LA+ R+ +G V G+ + RDW Y D+VRA Sbjct: 170 LHASSGILFNHESPLRGTEFVTRKITLALARIRQGVQDVLELGNLDSKRDWGYAGDYVRA 229 Query: 233 LYLVLKK 239 ++L+L++ Sbjct: 230 MWLMLQQ 236 >gi|228955785|ref|ZP_04117768.1| CDP-abequose synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803883|gb|EEM50519.1| CDP-abequose synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 319 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 24/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N +Q ++ + N LK+I + +VDI D+ Sbjct: 10 FLITGGYGFIGSHLARRLLN---LQAKIVLFIRTPSNSWRLKDILK--YIETYEVDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TN+IGT +++ +L +C Sbjct: 65 KQVQDAIKKINPDYIFHLAAYG-VNSAHTDYIHAIETNVIGTCNIIQAAKL-VNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENNINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I R+++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGEGEEPHKIFSYIILRVLQNKDVNLTLCNQ-LRDYCYIENVIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + L L S + I R D KI Sbjct: 233 QNEIFNIGSGTIH---PLKHYVELLFKHLKTNSRPNYGA---ISSRTNERWVPEADVQKI 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ N+E G+ KTV WY +N Sbjct: 287 KNSLFWEPRINIEEGIIKTVNWYKNN 312 >gi|153806788|ref|ZP_01959456.1| hypothetical protein BACCAC_01060 [Bacteroides caccae ATCC 43185] gi|149131465|gb|EDM22671.1| hypothetical protein BACCAC_01060 [Bacteroides caccae ATCC 43185] Length = 356 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 RDW Y +D+V ++L+L+ Sbjct: 225 DARRDWGYAKDYVECMWLILQ 245 >gi|53804727|ref|YP_113634.1| NAD-dependent epimerase/dehydratase family protein [Methylococcus capsulatus str. Bath] gi|53758488|gb|AAU92779.1| NAD-dependent epimerase/dehydratase family protein [Methylococcus capsulatus str. Bath] Length = 320 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 37/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ L VL +D + G+ +++ + + F L+ D+ Sbjct: 8 RILVTGGAGFLGSHLCESLLG-LGHDVLCVDNF-FTGSRDNILHLLGNPHFELLRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG + +ED P P S Y K ++ L + + Sbjct: 109 KRVKAKIFQASTSEVYGDPEVHPQTEDYVGHVNPIGPRSCYDEGKRCAETLFFDYRRQHN 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP P +++ I + ++G + LYGDG+ R + YV D + + Sbjct: 169 LSIKVARIFNTYGPRMHPNDGRVVSNFIVQALKGQPITLYGDGEQTRSFCYVSDLIEGFI 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 L+ N+G E F I L + +I + S ++L+ + P D R Sbjct: 229 RLMDSPDDFTGPVNLGNPGE-------FTIRQLAEKIIEMTGSSSKLV--YQPLPVDDPR 279 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + D + K ++ W P ++E GL T+ ++ D Sbjct: 280 QRRPDITLAKEKLDWEPTIHLEEGLVHTITYFDD 313 >gi|146308888|ref|YP_001189353.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp] gi|145577089|gb|ABP86621.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp] Length = 306 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 54/335 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN----LNSLKEISQSNL------F 52 ++VTGGAGFIGS L +D L AG+ L++L +SNL Sbjct: 4 ILVTGGAGFIGSHL--------------VDALLAAGHGVCVLDNLSMGKRSNLPLDNPRL 49 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT---NIIGTFILLE 109 F++ D+ D + A+ DA+ + AA + V S+ D+ + T N IGT + E Sbjct: 50 RFIEGDVADAAQVEQAMAGC--DAVAHLAAVASVQASV---DDPVATHQSNFIGTLNVCE 104 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLV 168 R + R L S+ VYG+ +GL ED P +PY+ K +S+ + Sbjct: 105 AMR---------RHGVRRVLYASSAAVYGNNGEGLAIDEDTAKAPLTPYAVDKLASEQYL 155 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWL 224 + +G+ + N +G P +I + R +G + ++GDG+ RD+ Sbjct: 156 DFYRRQHGLEPAVFRFFNIFGSRQDPSSPYSGVISIFTQRAQQGQPISVFGDGEQTRDFF 215 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 YV D + L L + + N+G N ++ EIG L L P ++ + Sbjct: 216 YVGDLIELLLQGLFGEVVEQPVNVGWNQAVSLKQLLAEIGALCGGLPPVTH--------L 267 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 R G R +++++++ Q + GL + Sbjct: 268 PARAGDIRHSRANNARLQAHYRLPQQTPLREGLRQ 302 >gi|48093463|gb|AAT40108.1| putative UDP-glucuronate decarboxylase 2 [Nicotiana tabacum] Length = 346 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 36/325 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V+D + G+ ++LK F + D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNF-FTGSKDNLKRWIGHPRFELKRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 92 EPLLV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG +E+ P S Y K ++ L+ + + Sbjct: 135 AKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + ++ N YGP + +++ I + + + + G R + YV D V L Sbjct: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRDEPLTVQAPGTQTRSFCYVSDMVNGL 254 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI-PKSYSHTELIRFIEDRPGHDR 292 +++ G NIG E I E+ L+ LI PK I+ +E+ P R Sbjct: 255 IRLMEGENTGP-INIGNPGEFTMI----ELAELVKELINPKVE-----IKSVENTPDDPR 304 Query: 293 RYAIDSSKIKSEIGWFPQENMESGL 317 + D +K K +GW P+ + GL Sbjct: 305 QRKPDITKAKELLGWEPKVKLRDGL 329 >gi|111023767|ref|YP_706739.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1] gi|110823297|gb|ABG98581.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1] Length = 330 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 148/334 (44%), Gaps = 51/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V++ID L+ GN +++ ++ F++ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLERGHEVVIIDDLS-TGNADAVPLGAE-----FVEGDVA 53 Query: 61 DRECIRSAL-KEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 E + L P D +++FAA+S V S+ +++ N++ T LLE R Sbjct: 54 --EVVSDVLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRH---- 107 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S +K F ST YG + +E P P++PY ATK + D+ + ++ + + Sbjct: 108 -SGTRKLVFS----STAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSL 162 Query: 178 PVLLSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 N G Y LIPL + + + + ++G DG +RD+ Sbjct: 163 AATSLRYFNVAGAYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDY 222 Query: 224 LYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++V D A L L+ G YN+G GF + +I T L Sbjct: 223 IHVLDLAEAHVLALESSIEGRHRIYNLGSGA-----------GFSVREVISACARVTGLP 271 Query: 282 RFIEDRP---GHDRRYAIDSSKIKSEIGWFPQEN 312 +ED P G S + +E+GW P+ Sbjct: 272 IAVEDAPRRAGDPAVLVASSDRAIAELGWRPEHT 305 >gi|83719479|ref|YP_442022.1| UDP-glucose 4-epimerase [Burkholderia thailandensis E264] gi|257138206|ref|ZP_05586468.1| UDP-glucose 4-epimerase, putative [Burkholderia thailandensis E264] gi|83653304|gb|ABC37367.1| UDP-glucose 4-epimerase, putative [Burkholderia thailandensis E264] Length = 363 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 82/351 (23%), Positives = 144/351 (41%), Gaps = 38/351 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIG A+ L + +V+D L + N+++ ++ + D+ D Sbjct: 13 KILVTGGAGFIGCAISERLAARAS-RYVVMDNLHPQIHANAVRPVALHEKAELVVADVTD 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT---------------FI 106 + L +FQP+ I++ AAE+ +S+ A N++GT I Sbjct: 72 AGAWDALLSDFQPEIIIHLAAETGTGQSLTEASRHALVNVVGTTRLTDAIVKHGIAVEHI 131 Query: 107 LLEETRLWWSCLSQDKKD-------QFRFLQISTDE--VYGSLDKGLFSEDMPYNPSSPY 157 LL +R + + K D Q Q+ + G ++ P+S Y Sbjct: 132 LLTSSRAVYGEGAWQKADGTIVYPGQRGRAQLEAAQWDFPGMTMLPSRADRTEPRPTSVY 191 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFL 213 ATK + ++++ AW P+ + N YGP ++ L E + L Sbjct: 192 GATKLAQEHVLRAWSLATKTPLSILRLQNVYGPGQSLTNSYTGIVALFSRLAREKKVIPL 251 Query: 214 YGDGQNVRDWLYVEDHVRALYLVL-KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 Y DG RD++ ++D A+ L ++ ++IG +D+ +I Sbjct: 252 YEDGNVTRDFVSIDDVADAIVATLAREPEALSLFDIGSGQATSILDMAR--------IIA 303 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 Y E R G R A D S+ + +GW PQ ++E G+ + W Sbjct: 304 AHYGAPEPQVNGAFRDGDVRHAACDLSESLANLGWKPQWSLERGIGELQTW 354 >gi|307132714|ref|YP_003884730.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Dickeya dadantii 3937] gi|306530243|gb|ADN00174.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Dickeya dadantii 3937] Length = 372 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 54/306 (17%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + E QPD I N A+SHV S + + IGT LLE R Sbjct: 64 DLTDTSNLTRIIAEVQPDEIYNLGAQSHVAVSFESPEYTADVDAIGTLRLLESIRFLGLA 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 124 ------NKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGM 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I ++ + +G +Y G+ ++RDW + D+V+ Sbjct: 178 YACNGILFNHESPRRGETFVTRKITRGLSNIAQGLEKCIYMGNLDSLRDWGHARDYVKMQ 237 Query: 234 YLVLKKGR-------IGERYNI-------------------GGNNERKNIDIV------- 260 +++L++ + G +Y++ G NE+ + + Sbjct: 238 WMMLQQEKPEDFVIATGVQYSVRDFIRMSAAKLGIELEFTGTGVNEKAVVSKITGNNAPA 297 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 ++G ++ A+ P+ + RP D SK K+ +GW P+ +E +++ Sbjct: 298 LKVGDVIVAVDPRYF-----------RPAEVDTLLGDPSKAKNVLGWVPETTLEEMIDEM 346 Query: 321 VCWYLD 326 V + L+ Sbjct: 347 VAYDLE 352 >gi|297816652|ref|XP_002876209.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp. lyrata] gi|297322047|gb|EFH52468.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp. lyrata] Length = 434 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 35/331 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGF+GS L L+ +V+VID + G +L +LFS + ++ Sbjct: 119 LRIVVTGGAGFVGSHLVDKLIGRGD-EVIVIDNF-FTGRKENL-----VHLFSNPRFELI 171 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + L E D I + A + + I TN++GT + L Sbjct: 172 RHDVVEPILLEV--DHIYHLACPASPVHYKYNPVKTIKTNVMGTL----------NMLGL 219 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ RFL ST EVYG + E P S Y K +++ L + + Sbjct: 220 AKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA 279 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP + +++ + + I + +YGDG+ R + YV D V L Sbjct: 280 GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKHPMTVYGDGKQTRSFQYVSDLVEGL 339 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ +G +N+G E +++ + ++D + I F + + Sbjct: 340 VALMENDHVGP-FNLGNPGEFTMLELAEVVKEVIDP--------SATIEFKPNTADDPHK 390 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK K + W P+ ++ GL + V + Sbjct: 391 RKPDISKAKELLNWEPKISLREGLPRMVSDF 421 >gi|237715188|ref|ZP_04545669.1| CDP-glucose-4,6-dehydratase [Bacteroides sp. D1] gi|237718371|ref|ZP_04548852.1| CDP-glucose-4,6-dehydratase [Bacteroides sp. 2_2_4] gi|262408859|ref|ZP_06085404.1| CDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|293370128|ref|ZP_06616691.1| CDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] gi|294643847|ref|ZP_06721639.1| CDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294810726|ref|ZP_06769374.1| CDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|229445021|gb|EEO50812.1| CDP-glucose-4,6-dehydratase [Bacteroides sp. D1] gi|229452304|gb|EEO58095.1| CDP-glucose-4,6-dehydratase [Bacteroides sp. 2_2_4] gi|262353070|gb|EEZ02165.1| CDP-glucose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|292634780|gb|EFF53306.1| CDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CMC 3f] gi|292640789|gb|EFF59015.1| CDP-glucose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294442059|gb|EFG10878.1| CDP-glucose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] Length = 359 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 35/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF GS L +L ++L +V+ + K Y+ N + + + L+ DICD Sbjct: 14 RVLVTGHTGFKGSWLSIWL-HELGAEVVGVAKDPYSEKDNYVLSGIGKKIKADLRADICD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + ++ + +QP+ + + AA+ V S E TN++GT +LE R+ Sbjct: 73 SQRMKEIFQTYQPEIVFHLAAQPLVRLSYDIPVETYETNVMGTINILEAIRV-------- 124 Query: 122 KKDQFRF-LQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 D + + I+TD+ Y + ++ + E+ P PYS++K +++ + +W ++ Sbjct: 125 -TDSVKVGIMITTDKCYENKEQIWGYRENEPMGGYDPYSSSKGAAEIAIASWRRSFFNPD 183 Query: 176 -----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G + N G + +++IP I + G ++ + + ++VR W +V + Sbjct: 184 QYDKHGKSIASVRAGNVIGGGDWALDRIIPDCIKALESGKNIDIR-NTKSVRPWQHVLEP 242 Query: 230 VRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF- 283 + L+ K + E +N G E +I V+++ + K+Y L Sbjct: 243 LSGYMLLTAKIWEEPTKYCEGWNFGPRAE--SITSVWDVA----NDVVKNYGSGGLNDIS 296 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 I + P R +D SK K ++GW P+ N+ + TV WY Sbjct: 297 IPNAPHEARFLMLDISKAKFQLGWEPRMNIHQCVALTVDWY 337 >gi|290976380|ref|XP_002670918.1| predicted protein [Naegleria gruberi] gi|284084482|gb|EFC38174.1| predicted protein [Naegleria gruberi] Length = 374 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 24/276 (8%) Query: 49 SNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILL 108 S+ F + D+ D + S + + +PD I N A+SHV S + + +GT +L Sbjct: 72 SSRFKLVYGDLTDTGNLISIISKIKPDEIYNLGAQSHVKVSFEMPEYTANVDAVGTLRML 131 Query: 109 EETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 E R +C + K RF Q ST E+YG + + E P+ P SPY+ K S ++V Sbjct: 132 EAIR---ACGLEKKT---RFYQASTSELYGLVQEIPQKETTPFYPRSPYACAKLYSYWIV 185 Query: 169 LAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDW 223 + + Y + +L ++ S GP F + I +A+ R+ G LY G+ RDW Sbjct: 186 INYREAYNMFALNGILFNHESIRRGP-TFVTRKITMAVARIHLGLQDCLYLGNLDAERDW 244 Query: 224 LYVEDHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + +D+V+A++L+L++ + GE++ + E+ + + + Y Sbjct: 245 GHAKDYVKAMWLMLQQEKPADYCVATGEKHKVREFVEKSFAVLGRRVEWKGTPGTVDEYG 304 Query: 277 HTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGW 307 + I ++ P + R + D +K ++E+GW Sbjct: 305 EVDGIVRVKVDPSYFRPTEVELLIGDPTKAETELGW 340 >gi|242063350|ref|XP_002452964.1| hypothetical protein SORBIDRAFT_04g035630 [Sorghum bicolor] gi|241932795|gb|EES05940.1| hypothetical protein SORBIDRAFT_04g035630 [Sorghum bicolor] Length = 439 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 30/349 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQ 56 M ++VTG AGF+G+ C + V+ +D A SLK+ ++ L S ++ Sbjct: 97 MSVLVTGAAGFVGTH-CSLALRKRGDGVVGVDNFN-AYYDPSLKKARKALLASHGVFVVE 154 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +++ AA++ V ++ ++ +NI G LLE + Sbjct: 155 GDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLE------A 208 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C +D Q + S+ VYG DK FSE D P+S Y+ATK + + + + H Y Sbjct: 209 C--KDADPQPAIVWASSSSVYGLNDKVPFSERDRTDQPASLYAATKKAGEEITHTYNHIY 266 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNV---RDWLYVEDHVR 231 G+ + YGP+ P+ + + TR +++G + +Y +V RD+ Y++D V+ Sbjct: 267 GLSITGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVYRGKDHVDLARDFTYIDDIVK 325 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFIE 285 L G+ GG +F +G +P + + + + + Sbjct: 326 GCLGSLDTA--GKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKHVV 383 Query: 286 DRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + PG+ D + + S + ++G+ P N++ GL K V WYL + R Sbjct: 384 EMPGNGDVPFTHANISLAREQLGYKPSTNLDVGLKKFVKWYLSYYGYTR 432 >gi|170759027|ref|YP_001787485.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406016|gb|ACA54427.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 307 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 29/330 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V+GGAGFIGS L L+N L V +ID L+ GN+N++ + +Q DI Sbjct: 1 MKVLVSGGAGFIGSNLVDKLIN-LGHNVCIIDNLS-TGNINNVNKKAQ-----LYINDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + KE + D + + AA+ V +SI N+ GT ++ +C+ Sbjct: 54 DPNVSKIFEKE-KFDIVYHLAAQIDVQKSIANPIFDSDVNVCGTINIIN------NCVKY 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + K + + S+ VYG E P S Y +K +++ + + + + Sbjct: 107 NVK---KIVYSSSAAVYGHPQYLPIDEAHGIRPISYYGLSKYTAEEYIRVFSNLNNLDFT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + +N YG P+ +I + + + + ++++GDG +RD+++VED V L Sbjct: 164 ILRYANVYGIRQDPKGEGGVISIFMNSLFKKQPLYIFGDGSALRDYIFVEDIVDTNIAAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 G ER+NIG + + L + +I I + R G + Sbjct: 224 SGGG-KERFNIG-------TGVYTSVKELAENMIDIIGLKCN-IEYAPARKGDIANSYFN 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 SK K+++ W P+ +++ GL KT+ +Y +N Sbjct: 275 ISKAKNKLNWIPKFSLKDGLKKTIEYYKNN 304 >gi|186471479|ref|YP_001862797.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] gi|184197788|gb|ACC75751.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] Length = 379 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/372 (22%), Positives = 160/372 (43%), Gaps = 68/372 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF-------S 53 M++++TGGAGFIGS L R LV+ + V V+D L+ ++ ++S LF Sbjct: 1 MKVLITGGAGFIGSNLARKLVSQ-NVTVTVLDNLS--PQIHGDDPYNKSALFLSVKDQVR 57 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F++ + DRE + +++ DAIV+ AAE+ +S+ D +I N+ GT ++L+ Sbjct: 58 FIEGSVLDRETLERSMR--GQDAIVHLAAETGTGQSMYEVDRYIKVNVRGTALMLD---- 111 Query: 114 WWSCLSQDKKDQFRFLQI-STDEVYG--------------------SLDKGLF------- 145 L ++ R + + S+ +YG + G F Sbjct: 112 ---VLVKNTGHTVRKVVVASSRAIYGEGKYRSPADGIVYPGAREENEMRAGHFDFMCPRT 168 Query: 146 ---------SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK 196 ED NPSS Y TK + + +V+ + GI N YGP Sbjct: 169 GEKMECLPTDEDSRINPSSVYGITKYNQEQMVMTVCRSLGIAGCALRYQNVYGPGQSLSN 228 Query: 197 ----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVLKKGRIGERYNIGGN 251 ++ + TR+ + + ++ DG+ RD++Y++D A + +L E + IG Sbjct: 229 PYTGILSIFSTRIKNENPINVFEDGKESRDFVYIDDVCDATMAALLSPTADNEIFGIGSG 288 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 + + + ++ L + +P + + R G R D ++ + +G+ P+ Sbjct: 289 ERTEVLGVATKLRDLYGSRVPINVTGAF-------RLGDIRHNYADLTRARERLGFQPKV 341 Query: 312 NMESGLNKTVCW 323 + + G+ + W Sbjct: 342 SFDEGIARFAAW 353 >gi|332879724|ref|ZP_08447415.1| GDP-mannose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682351|gb|EGJ55257.1| GDP-mannose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 385 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + ++TG G G+ L YL+ +V + + + N + + + Q NL L Sbjct: 4 KALITGITGQDGAYLAEYLLKK-GYEVHGMKRRSSLFNTDRIDHLYQDPHAENLNLILHY 62 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D I ++E QPD I N AA SHV S + + +GT +LE RL Sbjct: 63 GDLTDSMNITRLIQEVQPDEIYNLAAMSHVHVSFQTPEYVGNADGLGTLRILEAVRLLGL 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 D+ R Q ST E+YG + + SE P+ P SPY+ K + ++ + + Y Sbjct: 123 T------DKTRIYQASTSELYGLVQQVPQSEKTPFYPRSPYAVAKLYAYWITVNYREAYK 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRA 232 + N+ P F + I A++R+ G F G+ + RDW + +D+++A Sbjct: 177 MHASNGILFNHESPIRGETFVTRKITRALSRVALGMQDKFYMGNLSSQRDWGHAKDYIKA 236 Query: 233 LYLVLKK 239 +YL+L++ Sbjct: 237 MYLILQQ 243 >gi|167033846|ref|YP_001669077.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1] gi|166860334|gb|ABY98741.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida GB-1] Length = 324 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 30/338 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL----TYAGNLNSLKEISQSNLFSFLQ 56 M +++TG AGFIG + R L + I V+ ID L + L L+ + F F Sbjct: 1 MPVLITGVAGFIGFHVARRLC-EAGIDVVGIDNLNAYYSVELKLARLQRLFGFANFRFQT 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI + ++ +++ AA++ V S+ + N++G +LE + Sbjct: 60 LDIANSADLQQLFARQAFSEVIHLAAQAGVRYSLDNPGAYGQANLVGFLNILE------A 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHTY 175 C Q + + S+ VYG+ K FS D P P S Y+A+K +++ + ++ H Y Sbjct: 114 CRQQPPR---HLIYASSSSVYGANAKLPFSIDDPVEQPVSLYAASKRANELMAHSYAHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY- 234 IP YGP+ P+ + M+EG + +Y +G RD+ Y++D V ++ Sbjct: 171 RIPTTGLRFFTVYGPWGRPDMALFKFTRAMLEGRPIEVYNNGLMGRDFTYIDDIVESIVR 230 Query: 235 LVLKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L LK R E +NIG + + V + L + Y + +E Sbjct: 231 LRLKPPRPTEGQPPCQLFNIGRGQPVRLLQFVECLEAALGIKAQRDYLPLQAGDVLET-- 288 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 D + I + P ++E G+N V WY D Sbjct: 289 ------WADVGSLARWIDYSPGTSLEHGVNAFVGWYRD 320 >gi|254295535|ref|YP_003061557.1| UDP-glucose 4-epimerase [Hirschia baltica ATCC 49814] gi|254044066|gb|ACT60860.1| UDP-glucose 4-epimerase [Hirschia baltica ATCC 49814] Length = 339 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 149/337 (44%), Gaps = 46/337 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVDIC 60 ++VTGGAG+IGS C L+ + + +V D + A + L+E+S + + ++ D+ Sbjct: 4 ILVTGGAGYIGSHTCLELIKSGR-KPIVFDDFSNASPHVIERLEELSGTKI-DVVEGDVR 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + I A+K+++ DA+++FA V S + A ++ N+IGT +LL + Sbjct: 62 NFDQINKAIKDYKCDAVIHFAGLKAVGESEVRAIDYHDVNVIGTHVLLR-------AMKA 114 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYGI 177 +K D+ F +T VYG ++ED P N +S Y TK S +Y+ V G + Sbjct: 115 NKIDKIVFSSSAT--VYGVPKFLPYTEDHPRNATSTYGQTKLSVEYMLEDVRRSGEIKNV 172 Query: 178 PVLL------SNCSNNYG--PYHFPEKLIPLAITRMI-EGSHVFLYG------DGQNVRD 222 +L ++ S G P P L P + + + ++G DG VRD Sbjct: 173 AILRYFNPIGAHPSGRIGEAPNGIPNNLAPYVVQVACGKREAINIWGDDYDTPDGTGVRD 232 Query: 223 WLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 +++V D H+ AL YL KG G + K + FE K+ Sbjct: 233 YIHVVDLAQAHLAALDYLDAGKGAFTVNLGTGNGSSVKEVIAGFE----------KACGK 282 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 + R G + D S K +GW + NME Sbjct: 283 KIPMVIGPRRSGDIACFYADPSSAKKLLGWSAKLNME 319 >gi|227891754|ref|ZP_04009559.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] gi|227866413|gb|EEJ73834.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] Length = 331 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 53/358 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS L+ + + +V+D L G+ ++ + ++ F Q DI Sbjct: 1 MATLVLGGAGYIGSHTVDRLIEKGE-KTIVVDSLV-TGHRQAVNKDAK-----FYQGDIA 53 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R KE DA+++FAA S V S+ ++ N G LLE ++ Sbjct: 54 DKDFMRQVFKENSDIDAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLE-------VMN 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 + D+ F ST YG ++ E P NP +PY +K + ++ YGI Sbjct: 107 EFSIDKIVFS--STAATYGIPEEVPIKETTPQNPINPYGESKLMMEKIMRWADKAYGIKF 164 Query: 178 -PVLLSNCS-----NNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 P+ N + + G H PE L+P+ + M + + ++G DG N+RD+ Sbjct: 165 VPLRYFNVAGAKPDGSIGEDHMPETHLLPIVLQVAMGKRDKLQIFGDNYNTPDGTNIRDY 224 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D A L LK G +N+G + N +I L+A + ++ E+ Sbjct: 225 VHPLDLADAHILAVDYLKAGNPSTAFNLGSSTGFSNREI-------LEAA--RKVTNKEI 275 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I R G D + SS K + +GW PQ + + ++ W W L+ E Sbjct: 276 PAEIAPRRGGDPDVLVASSTKAREVLGWKPQFD-------DISKIIETAWKWHTLHPE 326 >gi|260437502|ref|ZP_05791318.1| UDP-glucose 4-epimerase [Butyrivibrio crossotus DSM 2876] gi|292810135|gb|EFF69340.1| UDP-glucose 4-epimerase [Butyrivibrio crossotus DSM 2876] Length = 329 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 147/333 (44%), Gaps = 49/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ + + V+VID L G++ ++ E ++ F + DI Sbjct: 1 MTILVLGGAGYIGSHTVYALI-EKGVDVVVIDNLE-TGHIEAVHEKAR-----FYKGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S L + + DA+++FAA S V S++ ++ N+ GT +LL+ + Sbjct: 54 DRAFVDSVLDKEKIDAVIHFAANSLVGESMVNPLKYYDNNVNGTKVLLQ-------SMVA 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST YG +K E P++ Y TK + + + +G+ + Sbjct: 107 HGLDKIVFS--STAATYGEPEKVPILETDRTEPTNTYGETKLAMEKMFKWTDRAHGLKYV 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + + ++ ++G DG +RD++ Sbjct: 165 SLRYFNACGAHVSGKIGEAHSPETHLIPLILQVPLGQREYISIFGDDYDTSDGTCIRDYI 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP---KSYSHT 278 +V D +A L L KG +N+G +GF + +I K H Sbjct: 225 HVTDLAQAHILAVDYLMKGNESNIFNLGNG-----------VGFTVKEVIDTARKVTGHE 273 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 R E R G R S K + + W P+ Sbjct: 274 IPARIAERRAGDPARLIASSDKARQVLLWKPEH 306 >gi|302876882|ref|YP_003845515.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|307687567|ref|ZP_07630013.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|302579739|gb|ADL53751.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] Length = 329 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 49/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS C Y + + V+V+D L G+ ++ E ++ F + D+ Sbjct: 1 MSVLVCGGAGYIGSH-CVYELIERGEDVVVVDNLQ-TGHRAAVHEKAK-----FYEGDVI 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + KE DA+++FAA S V S+ ++ N+ G LLE + ++ Sbjct: 54 DFDFMNKVFKENSIDAVIHFAANSLVGESMEKPLKYYNNNVYGAQKLLE------AMIAN 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K + + ST VYG E + NP++ Y TK + + ++ +GI + Sbjct: 108 DVK---KIVFSSTAAVYGEPKTVPVVESLDTNPTNTYGETKLAMEKMMKWCDQAHGIKFI 164 Query: 181 LSNCSNNYGPY--------HFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 N G + H PE LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAHENGLIGEAHSPETHLIPLILQVPLGKRESIMIYGDDYPTADGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 Y+ D + L L++ R G + +N+G N GF + +I + H Sbjct: 225 YIRDLIEGHILALERLRSGADSDVFNLGNGN-----------GFSVKEMIEAARRVTGHP 273 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + R G S K K +GW P+ Sbjct: 274 IPAKVSPRRAGDPAVLVASSEKAKEILGWTPK 305 >gi|150400811|ref|YP_001324577.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] gi|150013514|gb|ABR55965.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] Length = 302 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 M++++TGGAGFIGS + ++L N+ +V+V+D LT GNL+++K ++ F+ I Sbjct: 1 MKVLITGGAGFIGSHIVDKFLENNH--EVVVLDNLT-TGNLDNIKR--NNDNIEFINKSI 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L D +++ AA+ +V S+ NI+G +LE+ + + Sbjct: 56 RDND-----LNFEDIDVVIHHAAQINVRTSVENPVLDGDINILGLINILEKIKKYGV--- 107 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 KK F S VYG + E+ P SPY +K + + + YGI Sbjct: 108 --KKIIFAS---SGGAVYGEPEYMPVDENHVGAPMSPYGVSKFCGEEYIKLYNRLYGIDY 162 Query: 180 LLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + SN +G P +I + I +M++ ++GDG RD++YV D A Sbjct: 163 TILRYSNVFGERQDPLGEAGVISIFIDKMVKNEKATIFGDGGQTRDFVYVGDVAEANLKA 222 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGF-LLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 L NE NI E L ++I ++ + + + R G R + Sbjct: 223 LD-----------WKNEIVNIGTGIETSVNELYSVIANELNYNDKPIYDKPREGEVYRIS 271 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ +K K ++GW P +++ G+ +TV W Sbjct: 272 LEINKAK-KLGWKPIVDLKEGIKRTVEW 298 >gi|15613671|ref|NP_241974.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] gi|11386836|sp|Q9KDV3|GALE_BACHD RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|10173723|dbj|BAB04827.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] Length = 334 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 144/329 (43%), Gaps = 44/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS +L+ + QV+V+D L G+ +L +++ F DI Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGE-QVIVLDNLQ-KGHAGALSDVT------FYHGDIR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + D +++FAA S V S+ E+ N+IGT LL++ L Sbjct: 53 DDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKM------LEH 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K + + ST YG + E P P++PY TK + + + YG+ + Sbjct: 107 DVK---KIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIEKMFHWCQEAYGLQYV 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ + G H PE LIP+ + + + V ++G DG +RD++ Sbjct: 164 CLRYFNAAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCIRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L+K +N+ GN + ++ V E+ + H Sbjct: 224 HVMDLANAHYLACEHLRKDGQSGSFNL-GNGKGFSVKEVIEV-------CRQVTGHPIPA 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S K ++ +GW P+ Sbjct: 276 EIAPRRSGDPASLIASSEKAQTILGWEPK 304 >gi|225872252|ref|YP_002753707.1| putative GDP-6-deoxy-D-lyxo-4-hexulose reductase [Acidobacterium capsulatum ATCC 51196] gi|225792607|gb|ACO32697.1| putative GDP-6-deoxy-D-lyxo-4-hexulose reductase [Acidobacterium capsulatum ATCC 51196] Length = 328 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 86/325 (26%), Positives = 136/325 (41%), Gaps = 27/325 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R VTG G +GS L R L+ +V ++ + NL + ++ N+ + DI Sbjct: 11 RWFVTGATGHLGSFLVRLLLQQGH-EVAILRRTR--SNLWRIHDVE--NVLLHVYGDISQ 65 Query: 62 RECIRSALKEFQPDAIVNFAAE--SHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 E R +FQP+ + + A E S DR G +T N+ LLE LS Sbjct: 66 PEGWRRQFLDFQPEVVFHLAWEGVSAADRDAAGQ---MTRNVTAALRLLE--------LS 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ + + F + YG + E + P +PY K L+ + G+ Sbjct: 115 REARVRV-FAGTGSQAEYGPCSHRI-DESLQPKPCTPYGIAKYCLSMLMNQFCEAAGMRA 172 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK 239 L + YGP ++P I ++EG + L G+ + D+LYVED VRA Y + Sbjct: 173 LWFRIFSVYGPMDNTFHMLPTLIQSLLEGRPMALT-SGEQMWDYLYVEDAVRAFYAAVAN 231 Query: 240 GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSS 299 YN+ + I+ + L+ I S EL + D P H D Sbjct: 232 PDAHGIYNVASGQAVRLRSIMENVRDLIAPSI--SLGFGELAARLGD-PAH---LEGDIE 285 Query: 300 KIKSEIGWFPQENMESGLNKTVCWY 324 K++ GW P+ + SGL +TV W+ Sbjct: 286 KLRLATGWSPRVELASGLAETVMWH 310 >gi|332637107|ref|ZP_08415970.1| UDP-galactose 4-epimerase [Weissella cibaria KACC 11862] Length = 330 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 145/332 (43%), Gaps = 49/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L++D + V+V+D NL + + F +VDI Sbjct: 1 MAILVLGGAGYIGSHMVDTLLSDGR-DVVVVD------NLLTGHRAAVPAGVPFYEVDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +R ++ + +V+FAA S V S+ ++ N G LLE L Sbjct: 54 DKAALREVFEKENIEQVVHFAASSIVPESMADPLKYFDNNTAGMIALLE------VMLEF 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K Q F ST YG ++ E P NP +PY +K ++++ YG+ Sbjct: 108 DVK-QIVFS--STAATYGIPEENPIKETTPQNPINPYGESKLQMEHIMKWADDAYGLKWV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 V + + G H E L+P+ + T + + + ++G DG NVRD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHPVETHLVPIILQTALGQREKIMMFGDDYNTPDGFNVRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--E 279 +V D A L L KG ++N+G N GF + ++ + T E Sbjct: 225 HVMDLANAHVLALDYLAKGNESNQFNLGSAN-----------GFSVKQMVEAAREATGKE 273 Query: 280 LIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 + + R D + SS K + +GW P+ Sbjct: 274 IPAEVGPRRAGDPDSLVASSAKAREVLGWAPK 305 >gi|329941190|ref|ZP_08290469.1| UDP-glucose 4-epimerase [Streptomyces griseoaurantiacus M045] gi|329299721|gb|EGG43620.1| UDP-glucose 4-epimerase [Streptomyces griseoaurantiacus M045] Length = 326 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 55/340 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAG++GS + ++L+ + +V+V+D L+ +E + +F++ DI Sbjct: 4 KYLVTGGAGYVGSVVAQHLL-EAGHEVVVLDNLS-----TGFREGVPTGA-TFVEGDI-- 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R+ + F DA+++FAA S V S++ +++ N+ GT LL R Sbjct: 55 RDAAKWLDASF--DAVLHFAAFSQVGESVVKPEKYWENNVGGTMALLAAMR--------- 103 Query: 122 KKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + R L S T YG ++ E P P++PY A+K + D+++ +G+ + Sbjct: 104 -ETGVRTLVFSSTAATYGEPEQVPIVETAPTKPTNPYGASKLAVDHMISGEAAAHGLGAV 162 Query: 181 -----------LSNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNV 220 ++ YG H PE LIPL + ++ +G + ++G DG V Sbjct: 163 SLRYFNVAGAYATSSGATYGERHDPESHLIPL-VLQVAQGRREAISVFGDDYPTPDGTCV 221 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERY--NIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 RD+++V D A L L GE N+G N ++V + + +P+ Sbjct: 222 RDYIHVADLAEAHLLALTAAVPGEHLICNLGNGNGFSVREVVETVRQVTGHPVPE----- 276 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGL 317 + R G D + S+ + ++GW P +G+ Sbjct: 277 ----VVAPRRGGDPAVLVASADTARQKLGWNPSRADLAGI 312 >gi|259417238|ref|ZP_05741157.1| UDP-glucose 4-epimerase [Silicibacter sp. TrichCH4B] gi|259346144|gb|EEW57958.1| UDP-glucose 4-epimerase [Silicibacter sp. TrichCH4B] Length = 327 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 59/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L V + +T G +++K F + D+ DR Sbjct: 4 VLVTGGAGYIGSHACKALKQAGYTPVTYDNLVT--GWQDAVK------FGPFEKGDLTDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +QP A+++FAA S V ++ + N+ G+ L+E + CL Sbjct: 56 TRLDEVFARYQPVAVMHFAALSQVGEAMSEPGRYWANNVGGSLCLIEAA-VAAGCLD--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E+ P P + Y A+K + + ++ + +G+ ++ Sbjct: 112 -----FVFSSTCATYGEHDNVVLDENTPQQPLNAYGASKRAVEDILRDFEAAHGLRSVIF 166 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL--YG------DGQNVRDWLY 225 ++ G +H PE L+PL I + I+G L +G DG +RD+++ Sbjct: 167 RYFNVAGADPEAEVGEFHQPETHLVPLMI-QAIKGERAALTVFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTEL 280 V D V A L LK +G+ +N+G + GF + ++ ++ ++TE+ Sbjct: 226 VCDLVDAHILGLKWLEEGKGSRVFNLGTGS-----------GFSVKEVLSHSRAVTNTEV 274 Query: 281 IRFI-EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I E R G + S + E+GW P+ + T+ + + W W Sbjct: 275 PHVIGERRAGDCTKLVSGSVRAGHELGWEPKRS-------TLDQMIADAWHWH 320 >gi|257056728|ref|YP_003134560.1| UDP-galactose 4-epimerase [Saccharomonospora viridis DSM 43017] gi|256586600|gb|ACU97733.1| UDP-galactose 4-epimerase [Saccharomonospora viridis DSM 43017] Length = 321 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 53/338 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+LIVTGGAG+IGS +C + + +V V+D L+ G+ +++ E ++ F+Q D Sbjct: 1 MKLIVTGGAGYIGS-VCTARLLEAGHEVTVVDDLS-TGHADAVPEGAR-----FVQGDAA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + S L D +++FAA+S V S+ + N++ + LLE R Sbjct: 54 E---VASTLLAEGFDGVLHFAAKSLVGESMQDPGAYWRGNVLTSLRLLEAMR-------- 102 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG + E P P++ Y ATK + D+ + ++ +G+ + Sbjct: 103 -THGVQRLVFSSTAATYGEPETTPIPETAPTAPTNTYGATKLAIDHAITSYARAHGLAAV 161 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQNVRDWLY 225 ++ YG H E LIPL I ++ G V++YG DG +RD+++ Sbjct: 162 SLRYFNVAGAYGRYGERHTTETHLIPL-ILQVATGHRDQVYIYGDDYPTEDGTAIRDYIH 220 Query: 226 VEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEI-GFLLDALIPKSYSHTE 279 V D A L L G +N+G G + R+ ID E+ G + A++ + Sbjct: 221 VVDLADAHLLALAHAEPGTHQIFNLGNGTGFSVRQVIDACREVTGHPIPAVVSQR----- 275 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 R G S K + +GW PQ G+ Sbjct: 276 -------RAGDPAILVASSDKARQVLGWKPQHTDLPGI 306 >gi|148655987|ref|YP_001276192.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148568097|gb|ABQ90242.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 319 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 148/336 (44%), Gaps = 37/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++TG GF+G L +L++ +V I + A L +L + +++ D+ Sbjct: 1 MRALITGINGFVGGHLAEHLLSSGLWEVAGIAR-QPALALETL-----TGRVTYVAADLS 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI-IGTFILLEETRLWWSCLS 119 DRE AL +PD I + A +S+V + AD T + IG + L+ S L Sbjct: 55 DREQTLRALASIRPDVIFHLAGQSNVPHAF--ADPHTTVQMNIGA-----QLNLFLSVL- 106 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 Q + D + S++E+YG + + +E P P +PY+ +KA+ D + ++ + Sbjct: 107 QLRIDPL-IIVASSNEIYGLVRPEDLPVNEQTPLRPVNPYAVSKAAQDLFAYQYHISHRM 165 Query: 178 PVLLSNCSNNYGPYHFPEKLIP---LAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRA 232 + N+ GP ++P I R+ G V G+ RD+ V D VRA Sbjct: 166 RTVRLRPFNHIGPRQTEAFVVPAFAAQIARIEAGLQPPVLRVGNLAAERDFSDVRDIVRA 225 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RP 288 L G +G YN+G + +LD L+ S T I+ D RP Sbjct: 226 YELAALHGEVGAAYNVGSGQ-------AVGVQRILDILLTFS---THDIQIEPDPSRMRP 275 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D+S+ ++ GW P+ +E L T+ ++ Sbjct: 276 SDVPRVVCDASRFHADTGWTPRIPLEQTLFDTLEYW 311 >gi|15678401|ref|NP_275516.1| dTDP-glucose 4,6-dehydratase related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2621434|gb|AAB84879.1| dTDP-glucose 4,6-dehydratase related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 334 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 146/346 (42%), Gaps = 55/346 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIG+ L L N +VL +D + + +++ D+ + Sbjct: 26 RILVTGGAGFIGTNLVNELRNRGH-EVLAVD-------------LMHTEREDYMRADVRE 71 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +E + D + + AAE + TN+IGT L Sbjct: 72 YRQVERIFEEDKFDYVYHLAAEYGRWNGEDYYENLWKTNVIGT----------KHMLRMQ 121 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSS------PYSATKASSDYLVLAWGHT 174 +K FR + S+ EVYG GL SED M NP S Y+ TK + + + + Sbjct: 122 EKLGFRMIFFSSAEVYGDY-SGLMSEDVMVKNPISDTYQMNDYAITKWAGELMCMNSAEM 180 Query: 175 YGIPVLLSNCSNNYGPY--HFPEK-LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +G + N YGP+ + P K IP+ I + +Y + + D YVED VR Sbjct: 181 FGTETVRVRPVNCYGPHEKYSPYKGFIPIFIYHALHRKPYTVYKGHKRIID--YVEDSVR 238 Query: 232 ALYLVLKKGRIGERYNIGGNNE-----RKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 ++ GE YN+GG E ++ D+V E + D+++ + E Sbjct: 239 TFANIVDNFIPGEVYNVGGRTEWEHDIKEYSDMVLEAVGIDDSIVT----------YRES 288 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 P + +D SK ++ PQ E G+ +TV W W++R Sbjct: 289 EPFTTKVKTMDFSKAIRDLKHDPQVPPEEGIRRTVEWM---KWYYR 331 >gi|115449159|ref|NP_001048359.1| Os02g0791500 [Oryza sativa Japonica Group] gi|47497071|dbj|BAD19123.1| putative nucleotide sugar epimerase [Oryza sativa Japonica Group] gi|47497123|dbj|BAD19172.1| putative nucleotide sugar epimerase [Oryza sativa Japonica Group] gi|84514053|gb|ABC59069.1| UDP-glucuronic acid 4-epimerase isoform 2 [Oryza sativa Japonica Group] gi|113537890|dbj|BAF10273.1| Os02g0791500 [Oryza sativa Japonica Group] gi|125541426|gb|EAY87821.1| hypothetical protein OsI_09239 [Oryza sativa Indica Group] gi|125583970|gb|EAZ24901.1| hypothetical protein OsJ_08679 [Oryza sativa Japonica Group] Length = 437 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 42/355 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNLFS-- 53 M ++VTG AGF+G+ C + V+ ID N NS LK+ +S L S Sbjct: 97 MSVLVTGAAGFVGTH-CSLALRKRGDGVVGID------NFNSYYDPSLKKARRSLLASHG 149 Query: 54 --FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 ++ DI D + +++ AA++ V ++ ++ +NI G LLE Sbjct: 150 VFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLE-- 207 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLA 170 +C +D Q + S+ VYG DK F+E D P+S Y+ATK + + + Sbjct: 208 ----AC--KDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITHT 261 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQN----VRDWLY 225 + H YG+ + YGP+ P+ + + TR +++G + +Y G+N RD+ Y Sbjct: 262 YNHIYGLSITGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVY-RGKNRVDLARDFTY 319 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS------HTE 279 ++D V+ L G+ GG +F +G +P S + Sbjct: 320 IDDIVKGCLGSLDTA--GKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVK 377 Query: 280 LIRFIEDRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + + + PG+ D + + S + ++G+ P N++ GL K V WYL + R Sbjct: 378 AKKNVVEMPGNGDVPFTHANISLARQQLGYKPTTNLDVGLKKFVKWYLSYYGYTR 432 >gi|254409825|ref|ZP_05023606.1| GDP-mannose 4,6-dehydratase [Microcoleus chthonoplastes PCC 7420] gi|196183822|gb|EDX78805.1| GDP-mannose 4,6-dehydratase [Microcoleus chthonoplastes PCC 7420] Length = 361 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFL 55 R ++TG G GS L L+ D ++ +V T+ N + + I +Q+ Sbjct: 6 RALITGITGQDGSYLSELLLEKDYEVHGIVRRTSTF--NTDRIDHIYVDPHNQAARLFLH 63 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L+E +P I N A+SHV S + + +GT LLE R + Sbjct: 64 YGDLTDGVTLRRILEEVRPKEIYNLGAQSHVRVSFDCPEYTVDAVGMGTLRLLEAIRDYR 123 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + D RF Q + E++G + + E P+ P SPY+ K + + + + +Y Sbjct: 124 NRTGID----VRFYQAGSSEMFGKVQEVPQKETTPFYPRSPYACAKVYAHWQTVNYRESY 179 Query: 176 GI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 I +L ++ S G F + I AI R++ G LY G+ RDW Y +D+V Sbjct: 180 EIFGCNGILFNHESPRRGET-FVTRKITRAIARILSGQQKKLYLGNLDAKRDWGYAKDYV 238 Query: 231 RALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS-HTEL-I 281 +A++L+L++ GE ++I R+ +DI F + K++ + E Sbjct: 239 QAMWLMLQQDEPDDYVVATGETHSI-----REFLDIAFNC-------VGKNWQDYVEFDP 286 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 R++ RP D +K+K ++ W P + E Sbjct: 287 RYL--RPAEVELLIGDPTKVKQKLNWQPSLSFEQ 318 >gi|195012348|ref|XP_001983598.1| GH15492 [Drosophila grimshawi] gi|193897080|gb|EDV95946.1| GH15492 [Drosophila grimshawi] Length = 445 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 45/335 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R+++TGGAGF+GS +LV+DL IQ ++V+D N + +N F + D Sbjct: 116 RILITGGAGFVGS----HLVDDLMIQGHEIIVVDNFFTGRKRNVEHWLGHAN-FELIHHD 170 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + I + D I + A+ + + + I TN +GT + L Sbjct: 171 IVNPLFI-------EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTI----------NML 213 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAW 171 K+ + L ST EVYG D + + Y NP P Y K S+ L A+ Sbjct: 214 GLAKRVMAKVLIASTSEVYG--DPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAY 271 Query: 172 GHTYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + V ++ N YGP H + +++ I + + + +YG+G+ R + YV D Sbjct: 272 AKQEKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDL 331 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V + + L + N+G E+ + E ++ L+ + S + I +ED P Sbjct: 332 VDGM-IALMASNYTQPVNLGNPVEQ----TIEEFAKIIRLLVGGT-SEIKQISAMEDDP- 384 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ K + W P+ +E+GL +T+ ++ Sbjct: 385 --QRRKPDITRAKKRLNWEPKVPLEAGLRQTISYF 417 >gi|48097187|ref|XP_393716.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Apis mellifera] Length = 451 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 87/333 (26%), Positives = 145/333 (43%), Gaps = 41/333 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGF+GS +LV+ L + +V+V+D N + N F + D Sbjct: 120 RILVTGGAGFVGS----HLVDRLMLAGHEVIVVDNFFTGRKRNVEHWVGHEN-FELVHHD 174 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +R E D I + A+ + +L + I TN +GT + L Sbjct: 175 I-----VRPLYLEV--DEIYHLASPASPPHYMLNPVKTIKTNTLGTI----------NIL 217 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG ++ SE P P + Y K ++ L A+ Sbjct: 218 GLAKRVGARVLIASTSEVYGDPNEHPQSETYWGHVNPIGPRACYDEGKRVAETLSYAYMR 277 Query: 174 TYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V ++ N +GP H + +++ I + ++ + +YG G+ R + YV D V Sbjct: 278 QEGVSVRVARIFNTFGPRMHMNDGRVVSNFILQALQNDSITIYGSGKQTRSFQYVSDLVD 337 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + L + NIG E + E ++ L+ + EL +ED P Sbjct: 338 GL-VTLMASNYTQPINIGNPVEH----TIEEFALIIKDLVGTNSKIVELAA-VEDDP--- 388 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ K + W P+ + GL KT+ ++ Sbjct: 389 QRRRPDITRAKKYLNWEPKVPLAEGLKKTIMYF 421 >gi|229100363|ref|ZP_04231235.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-29] gi|228683064|gb|EEL37070.1| DTDP-glucose 4,6-dehydratase [Bacillus cereus Rock3-29] Length = 300 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 36/310 (11%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V +ID L + N + NL +Q DI D++ I + D + AA Sbjct: 4 KHEVWIIDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLIAQLFENNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ CL K + + +ST VY DK Sbjct: 64 NVQDSIDDARTTFENDTIGTFNLLEQ------CL----KYHVKMVFMSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNE 253 + + I ++ + +YGDG+ RD LYVED V A Y G I G + Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIIN----AGTGQ 226 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +I+ + E LI + + I + ++ + K K+ + W P+ ++ Sbjct: 227 DISINKLAE-------LISGNKVSIHHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKISL 278 Query: 314 ESGLNKTVCW 323 E G+ KT W Sbjct: 279 EDGVIKTEEW 288 >gi|163789192|ref|ZP_02183635.1| udp-glucose 4-epimerase [Flavobacteriales bacterium ALC-1] gi|159875605|gb|EDP69666.1| udp-glucose 4-epimerase [Flavobacteriales bacterium ALC-1] Length = 310 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 36/331 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +++TGGAG +GSAL L + V++ID L+ S+ ++ + + F++ D+ + Sbjct: 6 ILITGGAGNVGSALANALAKNKSNIVVIIDNLSTG----SIDKVPKLDNVIFIKADVNNY 61 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I + + + ++AA V R++ +LE+ + LS K Sbjct: 62 QDIVPVFGRYNFEYVFHYAALVGVKRTLENP-----------MSVLEDIEGIKNILSISK 110 Query: 123 KDQF-RFLQISTDEVYGS-LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R S+ EVYG + + P N PY+ K + ++ YG+ Sbjct: 111 NTGVKRVFYSSSSEVYGEPFEIPQNEQTTPLNSRLPYAIVKNVGEAFFRSFYKEYGLEYT 170 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV----RALYLV 236 + N YGP + ++P + + ++++YGDGQ R + YV+D+V +A+Y + Sbjct: 171 IFRFFNTYGPNQSDDFVVPRFLRAAMADENLYIYGDGQQTRSFCYVDDNVDTCIKAMYSI 230 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + E N+G DI I L +I + S +E++ + G R Sbjct: 231 ---EHVNEVLNVGS-------DIEMTILELAQQIIKFTNSRSEIVHLPALKEGDMARRCP 280 Query: 297 DSSKIKSEIGWFPQE--NMESGLNKTVCWYL 325 D+SK++S +E ++E+GL++ +YL Sbjct: 281 DNSKMRS---LLQRELVSLENGLDELKKFYL 308 >gi|150376036|ref|YP_001312632.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150030583|gb|ABR62699.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 368 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 56/360 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDL---KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 +++VTGG GFIG R++V +L ++ ++D L +++ +I+ + D Sbjct: 3 KVLVTGGCGFIG----RHVVEELLSGNYELRILDALNE--QVHADAQITLPPEVDMRRAD 56 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE--------- 109 ICD + ++SALK+ D +++ AAE V +S+ ++ N +GT +LLE Sbjct: 57 ICDADAVKSALKDV--DHVIHLAAEVGVGQSMYEISRYVGVNDLGTAVLLEAMIGMPIRR 114 Query: 110 -----ETRLWWSCLSQDKKDQFR-FLQISTDEVYG-----------SLDKGLFSEDMPYN 152 ++ L + + R ++ S E+ SL E+ P + Sbjct: 115 IVVASSMSVYGEGLYETAAGERRAHIRRSPAEIKTGAWNPSGPDGESLKPIATDENKPVD 174 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYG-------PYHFPEKLIPLAITRM 205 +S Y+ TK + + VL +G YG+ + N YG PY ++ +R+ Sbjct: 175 LASIYALTKYAQERQVLIFGEAYGMDAVALRLFNVYGAGQALSNPY---TGVLANFASRL 231 Query: 206 IEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGR-IGERYNIGGNNERKNIDIVFEIG 264 G ++ DG+ RD+++V D RA L L++ G NIG + DI Sbjct: 232 ANGQAPMVFEDGRQKRDFVHVRDVARAFRLALEQPHAAGHVINIGSGHAYAIADIA---S 288 Query: 265 FLLDAL-IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L DA+ +P+ E++ + R G R D SK + +G+ P +E L W Sbjct: 289 LLADAMGVPE--IGPEIMH--KARSGDIRNCFADISKARDLLGFEPAHRLEDSLADFAQW 344 >gi|89900031|ref|YP_522502.1| GDP-mannose 4,6-dehydratase [Rhodoferax ferrireducens T118] gi|89344768|gb|ABD68971.1| GDP-mannose 4,6-dehydratase [Rhodoferax ferrireducens T118] Length = 367 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 145/335 (43%), Gaps = 38/335 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ I V I + + N + I Q + F D Sbjct: 7 LITGITGQDGSYLAEFLLEKGYI-VHGIKRRASSFNTQRVDHIYQDPHVNNAHFKLHYGD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N A+SHV S + + +GT +LE R+ L Sbjct: 66 LSDTSNLVRIVQETQPDEIYNLGAQSHVAVSFESPEYTADVDGMGTLRILEAIRI----L 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK R+ Q ST E+YG + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 122 GLEKKT--RYYQASTSELYGLVQETPQRETTPFYPRSPYAVAKLYAYWITVNYREAYGMY 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I + + +G L+ G+ +RDW + +D+VR + Sbjct: 180 ACNGIMFNHESPRRGETFVTRKITRGLANISQGLEDCLFMGNIDALRDWGHAKDYVRMQW 239 Query: 235 LVLKKGR-------IGERYNIG----------GNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++L++ + G +Y++ G R V E+G+ A++P + Sbjct: 240 MMLQQDKPDDFVIATGVQYSVRSFLEWTATALGMQIRWEGSGVEEVGY---AVVPGASRE 296 Query: 278 TELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 ++R RP D +K K ++GW P+ Sbjct: 297 AAIVRIDPRYFRPTEVETLLGDPTKAKQKLGWVPE 331 >gi|37678533|ref|NP_933142.1| GDP-mannose-4,6-dehydratase [Vibrio vulnificus YJ016] gi|37197273|dbj|BAC93113.1| GDP-mannose-4,6-dehydratase [Vibrio vulnificus YJ016] Length = 373 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV-D 58 ++TG G GS L +L+ +V I + + N + I Q N FL D Sbjct: 7 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDRHDDNPKFFLHYGD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N A+SHV S + + IGT LLE R L Sbjct: 66 LTDTSNLTRILKEVQPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRF----L 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 122 GLEKKT--KFYQASTSELYGEVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGMY 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I + + +G LY G+ +RDW + +D+VR + Sbjct: 180 ACNGILFNHESPRRGETFVTRKITRGLANISQGLEKCLYLGNMDALRDWGHAKDYVRMQW 239 Query: 235 LVLKK 239 ++L++ Sbjct: 240 MMLQQ 244 >gi|310779467|ref|YP_003967800.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309748790|gb|ADO83452.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 329 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 155/355 (43%), Gaps = 50/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV + +V+V+D L Y G+ +++ E ++ Sbjct: 1 MTILVCGGAGYIGSHAVARLVEKGE-EVVVLDNL-YTGHRDAVPE-----GVKLCIGNLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + +E + DA+++FAA S V S+ ++ N+ G+ LL+ + Sbjct: 54 DEKFMDKVFQENKIDAVMHFAAYSLVGESVEKPLKYYENNVYGSLCLLK---------TM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K + + ST YG + E P++PY +K + + ++ YGI + Sbjct: 105 KKFGVNKIVFSSTAATYGEPENIPILETDKTEPTNPYGESKLAVEKMLKWCEKAYGINHI 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + ++ S G H PE LIPL + + + +F+YG DG +RD++ Sbjct: 165 VLRYFNVAGAHESGRIGEDHSPETHLIPLVLQVALGKREKIFMYGEDYDTHDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKS---YSHT 278 +V D V A L ++K + + YN+G N GF + +I S H Sbjct: 225 HVMDLVDAHILAIEKLKNNGKSSIYNLGNGN-----------GFTVKEVIETSRKVTGHP 273 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWR 332 R G + S K E+GW P+ + ME + W+ +N+ ++ Sbjct: 274 IPAEVAPRRAGDPAKLVASSEKAMKELGWKPEHDTMEKIIESAWKWHKNNSEGYK 328 >gi|254387500|ref|ZP_05002739.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294815114|ref|ZP_06773757.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|197701226|gb|EDY47038.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294327713|gb|EFG09356.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 144/348 (41%), Gaps = 53/348 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG++GS R L V+V D L+ G ++ E VDI Sbjct: 1 MRVLVTGGAGYVGSFTVRGLAA-AGHDVVVADNLS-TGRREAVAE------HDLRVVDIL 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGT---FILLEETRLWWSC 117 D E +R + F+PDA+++FAA + S+ + N+ GT L ET + Sbjct: 53 DTEALRRVFQGFRPDAVIHFAALKSSEASLRDITTYYRVNVTGTQNVLGLCAETGVG--- 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 RF+ S+ VYG+ E P P SPY +K + ++ ++G G+ Sbjct: 110 ---------RFVFSSSCAVYGTPQICPVDESAPVRPESPYGESKYLCERMIASYGRATGM 160 Query: 178 ------------PVLLSNCSNNYGPYHFPEKLIPLAIT---------RMIEGSHVFLYGD 216 N GP +++P+A+ R+ G + D Sbjct: 161 RYANLRYFNAAGAAADGALGENAGPS--ATQILPVAVRTALGLVPTLRIFGGD--YPTAD 216 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 G +RD+++VED RA V+++ +R N N R V E L+DAL K Sbjct: 217 GTALRDYIHVEDLARAHARVVEELDSDDR-NGAVNLGRGEPVSVRE---LVDAL-EKVSG 271 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 T + + RPG D + +S GW + + + + W+ Sbjct: 272 RTIDVSTVPRRPGDPALSWADPALAESRFGWRAEHSFDDIVRTAWAWH 319 >gi|300214231|gb|ADJ78647.1| UDP-glucose 4-epimerase [Lactobacillus salivarius CECT 5713] Length = 331 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 53/358 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS L+ + + +V+D L G+ ++ + ++ F Q DI Sbjct: 1 MATLVLGGAGYIGSHTVDRLIEKGE-KTIVVDSLV-TGHRQAVNKDAK-----FYQGDIA 53 Query: 61 DRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R KE DA+++FAA S V S+ ++ N G LLE ++ Sbjct: 54 DKDFMRQVFKENSDIDAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLE-------VMN 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 + D+ F ST YG ++ E P NP +PY +K + ++ YGI Sbjct: 107 EFSIDKIVFS--STAATYGIPEEVPIKETTPQNPINPYGESKLMMEKIMRWADKAYGIKF 164 Query: 178 -PVLLSNCS-----NNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 P+ N + + G H PE L+P+ + M + + ++G DG N+RD+ Sbjct: 165 VPLRYFNVAGAKPDGSIGEDHMPETHLLPIVLQVAMGKRDKLQIFGDDYNTPDGTNIRDY 224 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++ D A L LK G +N+G + N +I L+A + ++ E+ Sbjct: 225 VHPLDLADAHILAVDYLKAGNPSTAFNLGSSTGFSNREI-------LEAA--RKVTNKEI 275 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLYKE 337 I R G D + SS K + +GW PQ + + ++ W W L+ E Sbjct: 276 PAEIAPRRGGDPDVLVASSTKAREVLGWKPQFD-------DISKIIETAWKWHTLHPE 326 >gi|239584286|gb|ACR82900.1| AmgG [Streptomyces sp. KCTC 9047] Length = 306 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 29/324 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGFIG + R D V V+D + F +D+ Sbjct: 1 MRALVTGGAGFIGRHVARRF-RDEGHDVAVLDT-----------AWTPDEEFPGWALDVT 48 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R+A+ F+PD + + A + ++ I N+ GT ++L + Sbjct: 49 AEREVRAAVDAFRPDVVAHLAGVADARAALADPTTAIHCNVTGTAVVLG---------AA 99 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP---YSATKASSDYLVLAWGHTYGI 177 + R + + VY ++ ED P+ PS Y+ + + ++L + +G Sbjct: 100 ARTGVRRVIIAGSCWVYNAMRVDAVDEDEPFLPSGAGHFYTTSMMAKEFLAWDFARLHGQ 159 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + S YGP +P ++ + EG + +YGDG+ R +L+V D A L Sbjct: 160 EFTVLRYSPVYGPGMWPGLVVSAFLRAAAEGGPLVVYGDGRERRAFLHVHDLAEAFLLAT 219 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + YN+ G ++ + L +P Y R + +R+ + Sbjct: 220 DPVAANQVYNLEGPEIVTTGELAARVSELFGG-VPVVYREEPTRR---GELVYSQRF-VS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 + K + ++GW P ++ GL + V Sbjct: 275 TDKARVQLGWQPTISLREGLRREV 298 >gi|251795043|ref|YP_003009774.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] gi|247542669|gb|ACS99687.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] Length = 331 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 47/348 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L + +++V+D L + + L+ D+ Sbjct: 4 MAVLVTGGAGYIGSHAVAALAERGE-EIVVVDNLQQG----HREAVVGGKLYVG---DLR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + + KE + DA+++FAA S V S+ ++ N+ GT LLE+ + Sbjct: 56 DAEFMDTVFKENKIDAVIHFAANSLVGESMTNPAKYYHNNVYGTLCLLEK------MIEH 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K + + ST YG + E P++ Y TK + + ++ + +G+ + Sbjct: 110 DVK---KIVFSSTAATYGEPENVPIDEFDRTLPTNTYGETKLAMEKMMKWFDVAHGLKYV 166 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIP+ + + + H+ ++G DG +RD++ Sbjct: 167 SLRYFNAAGAHASGKIGEDHSPETHLIPIVLQAALGQRPHISVFGDDYATPDGTCIRDYI 226 Query: 225 YVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A L + K R G YN+ GN + ++ V EI + + E+ Sbjct: 227 HVSDLADAHVLAVDKLRQGSESAIYNL-GNGQGFSVKEVIEIA--------RKVTEREIK 277 Query: 282 RFIEDRPGHDRRYAIDSS-KIKSEIGWFP-QENMESGLNKTVCWYLDN 327 IE R D + SS + + E+GW P + N+E + W++++ Sbjct: 278 AVIEPRRAGDPATLVASSARARKELGWNPSRANLEDIIRSAWNWHVNH 325 >gi|81428889|ref|YP_395889.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] gi|78610531|emb|CAI55582.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] Length = 330 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 46/348 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ V V+D L G+ ++ + ++ F Q DI Sbjct: 1 MSILVLGGAGYIGSHTVDQLIQ-RGYDVAVVDSLV-TGHQGAINQKAR-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ +R+ ++ +++FAA S V S+ ++ N G LLE Sbjct: 54 DKDFMRTVFQQEDVTGVIHFAAFSIVPESMQAPLKYFDNNTYGMTALLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D R + ST YG E P P++PY +K + ++ YGI Sbjct: 105 NEFDVKRIVFSSTAATYGEPKSIPIKESDPQLPTNPYGESKLMMETMMKWADKAYGIKFV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGS--HVFLYG------DGQNVRDW 223 V+ + + G H PE L+P+ + ++ G + ++G DG NVRD+ Sbjct: 165 ALRYFNVVGAKPDGSIGEDHHPETHLLPI-VLQVAAGKRDQLSIFGDDYDTPDGTNVRDY 223 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D A L L G +N+G + N++IV + IP Sbjct: 224 VHVLDLADAHILAFEYLADGHDSNAFNLGSSTGFSNMEIVEAARKVTGKAIP-------- 275 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 + R G S K + +GW P+ +NME+ + W+L++ Sbjct: 276 LEMAPRRAGDPSTLIAASDKARETLGWAPKYDNMEAIIETAWNWHLNH 323 >gi|251797500|ref|YP_003012231.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247545126|gb|ACT02145.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 317 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 85/341 (24%), Positives = 139/341 (40%), Gaps = 40/341 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ ++TG GF+GS L +L+ + + V + +L ++ + + ++ Sbjct: 1 MKALITGITGFVGSHLAEHLLGE---GIEVTGTMRSHSSLRHIRHLLPD--MRLYECELM 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + +PD I + AA+S V S E +T NIIG L E R Sbjct: 56 DPQAVEHMMASIRPDLIFHLAAQSFVPLSWESPAETMTNNIIGQVHLQEAVRKLGLA--- 112 Query: 121 DKKDQFRFLQISTDEVYGSLDKG--LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + L + E YG +++ E P P SPY+ +K + DYL + TYG Sbjct: 113 -----SKVLIACSSEEYGHVEENEVPVKETNPLRPISPYAVSKIAQDYLGYQYFKTYGQH 167 Query: 179 VLLSNCSNNYGPY---HFPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRAL 233 ++ + N++GP F I + +G V G+ + RD+ V D VRA Sbjct: 168 IIRTRTFNHHGPRRGEQFVSSNFAKQIAEIEKGLKPPVLYVGNLEAKRDFTDVRDVVRAY 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----RPG 289 + + GE YNI EI ++ L+ SYS + I ED RP Sbjct: 228 RMAMDYCEAGEIYNIASGQ-------CHEIREVIQILL--SYSTVD-ITIEEDKTRLRPS 277 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW 330 + D K + GW P+ E + + N+W Sbjct: 278 DVKVLVGDYGKFYEQTGWKPEIPFEQTMKDLL------NYW 312 >gi|162460951|ref|NP_001105911.1| LOC732831 [Zea mays] gi|79013992|gb|ABB51650.1| UDP-glucuronic acid 4-epimerase [Zea mays] Length = 440 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 30/349 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQ 56 M ++VTG AGF+G+ C + V+ +D A SLK+ ++ L S ++ Sbjct: 97 MSVLVTGAAGFVGTH-CSLALRRRGDGVVGVDNFN-AYYDPSLKKARRALLASHGVFVVE 154 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +++ AA++ V ++ ++ +N+ G LLE + Sbjct: 155 GDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNVAGLVTLLE------A 208 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C +D Q + S+ VYG DK FSE D P+S Y+ATK + + + + H Y Sbjct: 209 C--KDADPQPAIVWASSSSVYGLNDKVPFSERDRTDQPASLYAATKKAGEEITHTYNHIY 266 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNV---RDWLYVEDHVR 231 G+ + YGP+ P+ + + TR +++G + +Y +V RD+ Y++D V+ Sbjct: 267 GLSITGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVYRGKDHVDLARDFTYIDDIVK 325 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFIE 285 L+ G+ GG +F +G +P + + + + + Sbjct: 326 GCLASLETA--GKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKNVV 383 Query: 286 DRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + PG+ D + + S + ++G+ P N++ GL K V WYL + R Sbjct: 384 EMPGNGDVPFTHANISLAREQLGYKPTTNLDVGLKKFVKWYLSYYGYTR 432 >gi|224100953|ref|XP_002312082.1| predicted protein [Populus trichocarpa] gi|118487220|gb|ABK95438.1| unknown [Populus trichocarpa] gi|222851902|gb|EEE89449.1| predicted protein [Populus trichocarpa] Length = 346 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDRLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 92 EPLLV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + +D Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + I + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ + E+I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMMELAETVKELINPEV-------EII-GVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + GL Sbjct: 304 RQRKPDITKAKELLGWEPKIKLRDGL 329 >gi|194689432|gb|ACF78800.1| unknown [Zea mays] gi|223949431|gb|ACN28799.1| unknown [Zea mays] gi|238010372|gb|ACR36221.1| unknown [Zea mays] Length = 440 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 30/349 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS----FLQ 56 M ++VTG AGF+G+ C + V+ +D A SLK+ ++ L S ++ Sbjct: 97 MSVLVTGAAGFVGTH-CSLALRRRGDGVVGVDNFN-AYYDPSLKKARRALLASHGVFVVE 154 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +++ AA++ V ++ ++ +N+ G LLE + Sbjct: 155 GDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNVAGLVTLLE------A 208 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTY 175 C +D Q + S+ VYG DK FSE D P+S Y+ATK + + + + H Y Sbjct: 209 C--KDADPQPAIVWASSSSVYGLNDKVPFSERDRTDQPASLYAATKKAGEEITHTYNHIY 266 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNV---RDWLYVEDHVR 231 G+ + YGP+ P+ + + TR +++G + +Y +V RD+ Y++D V+ Sbjct: 267 GLSITGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVYRGKDHVDLARDFTYIDDIVK 325 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTELIRFIE 285 L+ G+ GG +F +G +P + + + + + Sbjct: 326 GCLASLETA--GKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRVKAKKNVV 383 Query: 286 DRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + PG+ D + + S + ++G+ P N++ GL K V WYL + R Sbjct: 384 EMPGNGDVPFTHANISLAREQLGYKPTTNLDVGLKKFVKWYLSYYGYTR 432 >gi|217976280|ref|YP_002360427.1| GDP-mannose 4,6-dehydratase [Methylocella silvestris BL2] gi|217501656|gb|ACK49065.1| GDP-mannose 4,6-dehydratase [Methylocella silvestris BL2] Length = 352 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 24/267 (8%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + ++ +GT +LE R+ Sbjct: 66 DLTDSTNLIRIVQEVQPDEIYNLAAQSHVQVSFETPEYTANSDALGTLRILEAMRI---- 121 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L K RF Q ST E+YG + SE P+ P SPY+A K + ++ + + YG+ Sbjct: 122 LGLGAKS--RFYQASTSELYGKVQAIPQSETTPFYPRSPYAAAKLYAYWITVNYREAYGM 179 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRA 232 N+ GP E + ITR + H+ L G+ RDW +D+V Sbjct: 180 HASNGILFNHEGPTR-AETFVTRKITRAVAAIHLGLQDKLFLGNLDAQRDWGNAKDYVEG 238 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 ++ +L++ GE + + ER +I IG+ + + + + +E Sbjct: 239 MWRILQQPEADDYVLATGEMHTVREFVERAFAEIGVTIGWKGEGVDERGFDTKTGKALVE 298 Query: 286 DRPGHDRRYAI-----DSSKIKSEIGW 307 P + R + D +K ++GW Sbjct: 299 IDPRYFRPTEVELLLGDPTKAFEKLGW 325 >gi|125717843|ref|YP_001034976.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK36] gi|125497760|gb|ABN44426.1| UDP-glucose 4-epimerase, putative [Streptococcus sanguinis SK36] Length = 347 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 46/349 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ K V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLIAAGKEDVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S++ ++ N G LLE + C Sbjct: 69 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLE---VMQECGV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADKAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G+ + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRAGQPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDN 327 + E RPG S K + +GW P+ +N+E+ + W+ + Sbjct: 291 PLEIAERRPGDPDTLIASSEKARKVLGWQPKFDNIETIIETAWKWHFSH 339 >gi|47198261|emb|CAF87828.1| unnamed protein product [Tetraodon nigroviridis] Length = 253 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 21/154 (13%) Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 Q D+C+ + + DA+ + AA++HV+ S F N+ GT +LLE R Sbjct: 48 QGDVCNPRLVNHIFHSERIDAVFHLAAQTHVESSFRCPSSFQRVNVEGTRVLLEAAR--- 104 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF+ +STDEVYG +F E P PS+PYSATKA++++LV ++ Y Sbjct: 105 ----GARHRPRRFVYVSTDEVYGPSADQVFDESSPLRPSNPYSATKAAAEFLVTSYRDAY 160 Query: 176 GI-----PVLLSNCSNNYGPYHFPEKLIPLAITR 204 + P C N PLA+TR Sbjct: 161 QVGQTRPPPRPHRCGTN---------PPPLAVTR 185 >gi|282891209|ref|ZP_06299712.1| hypothetical protein pah_c048o039 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498902|gb|EFB41218.1| hypothetical protein pah_c048o039 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 322 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 22/328 (6%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQVDI 59 +IVTG AGFIG L V+ D Y+ L + E+ + ++ DI Sbjct: 9 IIVTGAAGFIGFHTTLALAQRGD-HVIGYDNFNDYYSPQLKRDRCELLKKAGIEVVEGDI 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 CD ++ ++ Q VN AA++ V S+ ++ +N+ G +LE + Sbjct: 68 CDTSKLKQCVRANQATHFVNLAAQAGVRYSLTNPQSYVKSNLEGFVSVLE--------IC 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +D + S+ VYG K FS ED +S Y ATK +++ + H Y IP Sbjct: 120 KDHPG-ISLVYASSSSVYGLNRKIPFSIEDRTDQQASLYGATKKANELFAQTYHHLYRIP 178 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 V YGP+ P+ L ++ G + +Y G+ RD+ YV+D V + + Sbjct: 179 VTGLRFFTVYGPWGRPDMAYSLFTKAILSGEPIEIYNYGKMQRDFTYVDDIVSGILAAID 238 Query: 239 KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDS 298 + + +N+G + + ++ + + + T F E +PG D Sbjct: 239 REAQCDLFNLGHHEPVELLEFI--------RTLEEYLGRTATKIFKELQPGDVPETFADI 290 Query: 299 SKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + P+ M GL K + WY D Sbjct: 291 RESTRHLNFVPKVGMREGLAKFLDWYRD 318 >gi|209551572|ref|YP_002283489.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537328|gb|ACI57263.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 47/335 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAGF+GS LC L+ +V+ +D + +N + ++ + F ++ D+ Sbjct: 26 LVNGGAGFLGSHLCERLLQRGH-RVICLDNFSTGRRVN-VDHLASNARFQLVEHDVRQPF 83 Query: 64 CIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 I ++L I NFA+ + R +G + TN++G L+ R + + Sbjct: 84 DIEASL-------IFNFASPASPPDYQRDPVGT---LLTNVLGAVNTLDCARKTGAVV-- 131 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +Q ST EVYG ++ E P P + Y K S++ L + TY Sbjct: 132 --------VQSSTSEVYGDPNQSPQQESYCGNVNPIGPRACYDEGKRSAETLFFDYHRTY 183 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + + N YGP + +++ I + + + + +YGDGQ R + YV+D V Sbjct: 184 GVDIKVGRIFNTYGPRMRLDDGRVVSNFIVQALRNADLTIYGDGQQTRSFCYVDDLVEGF 243 Query: 234 YLVLKKGRIGE-RYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 G N+G E R+ +IV + + S S + + D P Sbjct: 244 LRFSAAGDACHGPINLGNPAEITVRRLAEIVRD--------LTNSRSQIVHLPAVTDDP- 294 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S+ +++GW P +E+GL +TV ++ Sbjct: 295 --RQRRPDISRAMADLGWQPCIGLETGLARTVDYF 327 >gi|83855397|ref|ZP_00948927.1| UDP-glucose 4-epimerase [Sulfitobacter sp. NAS-14.1] gi|83843240|gb|EAP82407.1| UDP-glucose 4-epimerase [Sulfitobacter sp. NAS-14.1] Length = 327 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 53/350 (15%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L V + +T G +++K F+Q D+ +R Sbjct: 4 ILVTGGAGYIGSHACKALAAAGHTPVTFDNLVT--GWRDAVK------FGPFVQGDLLNR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 I +A +++QP A+++FAA S V S+ + N+ G+ L+E T + C Sbjct: 56 AEIDAAFEQYQPVAVMHFAALSQVGDSMKQPGTYWRNNVEGSLNLIEAT-VAAGCK---- 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E+ +P + Y A+K + + ++ + YG+ ++ Sbjct: 111 ----HFVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIEDILRDFEAAYGLQSVIF 166 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDWLY 225 ++ G +H PE LIPL + I+G + ++G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEFHQPETHLIPLMLD-AIDGKRDALTIFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 V D V A L L++ + +N+G ++V + + +P + Sbjct: 226 VCDLVDAHVLGLNWLREDKGSRVFNLGTGTGFSVREVVEHSREVTNRAVPMTEG------ 279 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + RPG + S + ++E+GW P + T+ + + W W Sbjct: 280 --DRRPGDCTKLVSGSVRAETELGWRPTRS-------TLQQMITDAWRWH 320 >gi|182416994|ref|ZP_02948374.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237666204|ref|ZP_04526191.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379170|gb|EDT76672.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237658294|gb|EEP55847.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 327 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 58/359 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M IV GGAG+IGS L+ + V+V+D NL S E + ++ F + DI Sbjct: 1 MSYIVLGGAGYIGSHAVNKLIEN-NYDVIVVD------NLQSGHEEAINSKAKFYKGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + K+ D + +FAA S V S+ + N+ G ILLE +++ Sbjct: 54 DKNFLSNVFKKENIDGVFHFAANSIVGESMKEPLMYFNNNVYGMQILLE-------VMNE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +EDM P++ Y TK + ++ YG+ Sbjct: 107 HNVNKIVFS--STAATYGEPKQVPITEDMETCPTNTYGETKLVMEKMMKWCDKAYGMKYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 V + + G H PE LIP+ + T + + H+ ++G DG VRD++ Sbjct: 165 ALRYFNVAGAEHDGSIGEDHNPETHLIPIVLQTALGKRDHITIFGDDYDTEDGTCVRDYV 224 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D V A L +K G +N+G + GF + ++ + T+ Sbjct: 225 HVVDLVEAHILAMKYLTHGGESNTFNLGSSQ-----------GFSVKEIVETARKVTDKN 273 Query: 281 IRFI--EDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDNNWWWRPLYK 336 I+ I E R G + S K + +GW P + N+E+ + + W W +K Sbjct: 274 IKAIIGERRAGDPSKLIASSDKARKILGWNPIRTNIEN--------IIKDAWLWHDTHK 324 >gi|159905959|ref|YP_001549621.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C6] gi|159887452|gb|ABX02389.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C6] Length = 292 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 44/327 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + LV + V ++D L+ GN +LK +++ F+ DI Sbjct: 1 MKILVTGGAGFIGSHIVDLLVENGH-DVSILDNLS-TGNKKNLKVLAK-----FINGDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + +++ AA+ +V S+ NI+GT +LE+ + + Sbjct: 54 DKNLDLTGF-----ECVIHEAAQINVRTSVENPVFDANINILGTINILEKIKEY-----D 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG + E P SPY +K ++ + + Y I Sbjct: 104 VKKIIFSS---SGGAVYGEPEYLPVDEKHSLKPLSPYGLSKFCAEEYIKLYNRLYDIEYC 160 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P +I + I +M +G +YGDG RD++ V+D RA + L Sbjct: 161 ILRYSNVYGERQDPLGEAGVISIFIDKMKKGESPVIYGDGNQTRDFVNVKDVARANLMAL 220 Query: 238 KKGRIGERYNIGGNNERKNIDIVF-----EIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 E NI E +I+ +F EIGF + + K +R G Sbjct: 221 NWKN--ETVNICSGKEI-SINELFKIISSEIGFDKNPIYEK------------EREGEVY 265 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNK 319 R ID K +S +GW P+ +++G+ + Sbjct: 266 RIYIDYEKAES-LGWIPEVELKNGIKE 291 >gi|90417976|ref|ZP_01225888.1| UDP-glucose 4-epimerase [Aurantimonas manganoxydans SI85-9A1] gi|90337648|gb|EAS51299.1| UDP-glucose 4-epimerase [Aurantimonas manganoxydans SI85-9A1] Length = 341 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 46/347 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAG+IG+ C L+ + + +V D L+ N E + F Q DI D Sbjct: 10 RVLITGGAGYIGAHTC-LLLAERGYEAVVYDNLS-----NGHAEFVRWGAFE--QGDIRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +RS ++QPDAI++FA V +S+ F N+ GT L+ + Sbjct: 62 TNRLRSVFSQYQPDAIIHFAGLIEVAQSVRDPLAFYDNNVSGTLSLI-------TAAEAA 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D+ F ST YG +ED P SPY +K ++++ I + Sbjct: 115 GVDKIVF--SSTCATYGIPQFTPLTEDHVQAPISPYGWSKLLVEHILRDLSGLDRIRCAI 172 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWLY 225 ++ G +H PE +PL I + F ++G DG +RD+++ Sbjct: 173 LRYFNAAGADPEARIGEWHTPETHAVPLVIETALGQRDCFTIFGDDYDTADGTCIRDYVH 232 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HVRA+ +L G N+G ++V + AL+ T Sbjct: 233 VIDLADAHVRAVEYLLNDG-ASVALNLGTGTGTSVAELVETV-----ALVSGRPVKT--- 283 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 R + RPG D+ + + +GW PQ ++ S + W+ +N Sbjct: 284 RRADRRPGDPSILLADNRRARDVLGWQPQHDLASSIESAWRWHTKSN 330 >gi|46908649|ref|YP_015038.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47092763|ref|ZP_00230548.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|226225025|ref|YP_002759132.1| UDP-glucose 4-epimerase [Listeria monocytogenes Clip81459] gi|254932282|ref|ZP_05265641.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|46881921|gb|AAT05215.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47018851|gb|EAL09599.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|225877487|emb|CAS06201.1| Putative UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583839|gb|EFF95871.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|328465213|gb|EGF36476.1| UDP-glucose 4-epimerase [Listeria monocytogenes 1816] gi|332312907|gb|EGJ26002.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. Scott A] Length = 327 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ +V+VID NL + + S F + DI Sbjct: 1 MSIVVLGGAGYIGSHAVDELITR-GYEVVVID------NLRTGHKESIHTKAKFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ ++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A ++ + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|325001195|ref|ZP_08122307.1| UDP-glucose 4-epimerase [Pseudonocardia sp. P1] Length = 322 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 48/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +L+ + +V+V+D L+ G+ +++ + +F++ ++ Sbjct: 1 MKLLVTGGAGYVGSVCAAHLL-EAGHEVVVLDDLS-TGHRDAVPAGA-----TFVEGELG 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 F D +++FAA S V S+ +++ N++ +F LLE R Sbjct: 54 STAGDVLGAGGF--DGVLHFAARSLVGESVEKPEKYWNGNVVASFRLLEAIR-------- 103 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + R + ST YG ++ +E P P++PY A+K + D+++ ++ +G+ Sbjct: 104 -EHAVPRLVFSSTAATYGEPEQVPITETAPTRPTNPYGASKLAIDHMITSYAAAHGLAAT 162 Query: 179 ------VLLSNCSN--NYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVR 221 V ++ S G H E LIPL + ++ G+ + +YG DG VR Sbjct: 163 SLRYFNVAGAHVSGAERLGERHAVETHLIPL-VLQVAAGTRESISIYGDDWPTPDGTCVR 221 Query: 222 DWLYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D+++V+D A L L+ G YN+G +++V + IP + Sbjct: 222 DYIHVDDLADAHLLALQHATAGRHDVYNLGSGRGFSVLEVVEACRAVSGHPIPAVVA--- 278 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G S + E+GW P Sbjct: 279 -----PRRAGDPAVLVASSERAAGELGWKPSRT 306 >gi|317133280|ref|YP_004092594.1| GDP-mannose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] gi|315471259|gb|ADU27863.1| GDP-mannose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] Length = 343 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/338 (23%), Positives = 144/338 (42%), Gaps = 51/338 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++TG G GS L +L+ +V + + + + ++ F D+ D Sbjct: 3 KALITGVTGQDGSYLSEFLLEK-GYEVYGTIRRSSVDFRERIDHLEGNSCFHLRYGDLSD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + E +PD I N AA+SHV S + + G +LE R+ Sbjct: 62 SLSLVKLIGEVRPDEIYNLAAQSHVQVSFDVPEYTADVDATGVLRVLEAVRVC------G 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI---- 177 + R Q ST E++G +++ SE P++P SPY+ K ++V + YG+ Sbjct: 116 LEKTCRIYQASTSELFGKVEEVPQSETTPFHPYSPYAVAKQYGFWIVKEYREAYGMFCCS 175 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALYLV 236 +L ++ S G F + + LA R+ +G L G+ ++RDW Y +D+V ++L+ Sbjct: 176 GILFNHESERRGE-TFVTRKVTLAAARIAQGKQEKLCLGNLSSLRDWGYAKDYVECMWLI 234 Query: 237 LKKGR-------IGERYNI------------------GGNNERKNIDIVFEIGFLLDALI 271 L+ + GE++++ G + K +D V G +L + Sbjct: 235 LQNEKPEDFVIATGEQHSVREFCRLAFHHAGIELEFAGEGMDEKGVDKV--TGKILVEVS 292 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 P Y T+++ D SK K+E+GW P Sbjct: 293 PDFYRPTDVVNLWG-----------DPSKAKAELGWNP 319 >gi|266621948|ref|ZP_06114883.1| UDP-glucose 4-epimerase [Clostridium hathewayi DSM 13479] gi|288866361|gb|EFC98659.1| UDP-glucose 4-epimerase [Clostridium hathewayi DSM 13479] Length = 338 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 60/361 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 MR++VTGGAG+IGS C L+N + +V+V+D L + +LN +K+I+ ++ +F + D Sbjct: 1 MRILVTGGAGYIGSHTCVELLNQGQ-EVVVVDNLCNSSEESLNRVKQITGKDV-TFYKAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D++ + + DA+++FA V S+ E+ NI GT +L + R Sbjct: 59 LLDKDAMEEIFSKETIDAVIHFAGLKAVGESVAKPLEYYHNNITGTLVLCDVMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG +ED P ++PY TK+ + ++ HT Sbjct: 113 ---NHGVKKIIFSSSATVYGDPAFVPITEDCPKGAITNPYGQTKSMLEQILTDL-HTADP 168 Query: 178 --PVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG------DG 217 V+L N G P P L P IT++ G V ++G DG Sbjct: 169 EWSVILLRYFNPVGAHKSGLIGEDPAGIPNNLTPY-ITQVAVGKLKEVGVFGNDYDTPDG 227 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV+A+ + + YN+G F + +++A Sbjct: 228 TGVRDYIHVVDLAIGHVKAVDKLAQSEPDVRIYNLGTGKG-------FSVLQMIEAF--- 277 Query: 274 SYSHTELIRFI--EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 S + + I ++ RPG D++ K E+GW E G+++ +C +++W W Sbjct: 278 SKACGKQIPYVIKPRRPGDIAECYADAALAKKELGW----EAERGIDE-MC---EDSWRW 329 Query: 332 R 332 + Sbjct: 330 Q 330 >gi|291335475|gb|ADD95087.1| GDP mannose 4 6 dehydratase [uncultured phage MedDCM-OCT-S04-C348] Length = 338 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 37/350 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---D 58 + ++TG G G+ L LV V +I L+ LK I L L++ D Sbjct: 3 KALITGITGQDGAYLAHLLVKKKYEIVGLIRNNANPHQLDRLKWIFNGQLPECLRLEYSD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I +++ +PD I N AA+SHV S N +G +LE R + Sbjct: 63 MTDAASINRLVQDSKPDEIYNLAAQSHVGVSFKSPASTAHVNALGVLNILEACRNVGA-- 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 RF Q ST E++G + + E+ + P SPY K +L + + +YG+ Sbjct: 121 --------RFYQASTSEMFGKVQEVPQHEETNFYPRSPYGVAKLFGYWLTVNYRESYGLF 172 Query: 178 ---PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRAL 233 +L ++ S G +F K I + + EG H+ G+ + RDW + D+V A+ Sbjct: 173 GCNGILFNHESPIRGE-NFVTKKITKGLVDVKEGKQHILQLGNLDSWRDWGHAADYVEAM 231 Query: 234 YLVL-------------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 YL+L K+ + I N + N+D+V++ G LD + + + Sbjct: 232 YLMLQENEPDDYVVSTGKQTSVRHFCEIAAN--KLNLDLVWK-GEGLDEIGWSNTLKKPV 288 Query: 281 IRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 I+ + RP DSSK + + W P+ ++ +++ + + L+N+ Sbjct: 289 IKINKQFYRPAEVDTLLGDSSKAQKILNWSPKHTLDDLVDEMIDYDLNNS 338 >gi|294777052|ref|ZP_06742510.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|294449110|gb|EFG17652.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] Length = 360 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + ++ QPD I N AA+SHV S + + + Sbjct: 53 VRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 112 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 113 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 166 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G +F + I LA R+ +G LY G+ Sbjct: 167 YGFWITKNYRESYGMFAVNGILFNHESERRGE-NFVTRKITLAAARIAQGYQDKLYLGNL 225 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 ++RDW Y +D+V ++++L+ GE + + G Sbjct: 226 DSLRDWGYAKDYVECMWMILQHDTPEDFVIATGEYHTVREFCTLAFKEVGLELRWEGKGV 285 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + ID+ G L A+ PK + RP + D +K K+ +GW P++ Sbjct: 286 DERGIDVA--TGKELVAVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 332 >gi|238855447|ref|ZP_04645757.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|260665167|ref|ZP_05866016.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|282933045|ref|ZP_06338435.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|313472733|ref|ZP_07813221.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|238831937|gb|EEQ24264.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|239529295|gb|EEQ68296.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|260560904|gb|EEX26879.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|281302803|gb|EFA95015.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 147/333 (44%), Gaps = 47/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS L+ D V+V+D L Y G+ ++ + ++ F D+ Sbjct: 1 MRVLVTGGAGYIGSHTVNALLEDGN-DVVVLDNL-YTGHRQAVNKKAK-----FYHGDVL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L + + DA+++FAA V S+ ++ N+ G LL+ Sbjct: 54 DTSLVTNILMDEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAM--------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K + L S+ + K L E P NP +PY TK + ++ GI Sbjct: 105 -KTAGVKNLVFSSSAATYGIPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDKADGIKS 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ + G H PE L+P + G+ F ++G DG NVRD+ Sbjct: 164 IALRYFNVAGASLDASIGEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDY 223 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D HV AL+ V+K + + +N+G N N++I+ + IP + Sbjct: 224 VHVVDLAQAHVLALHYVVKNQK-SDVFNLGSANGFSNLEILQSAIKVTGEDIPYTMG--- 279 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G DS+K ++ + W PQ + Sbjct: 280 -----PRRGGDPDSLVADSTKARTILNWHPQHD 307 >gi|157413747|ref|YP_001484613.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] gi|157388322|gb|ABV51027.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] Length = 325 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 149/332 (44%), Gaps = 41/332 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDICD 61 +V+GGAGF+GS L L+ + + VL +D L+ Y+GN+ LK+ + F F+ DI Sbjct: 16 VVSGGAGFLGSHLIDKLLKNGQ-NVLCLDNLSSGYSGNIAHLKKNKK---FLFINHDIL- 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCLS 119 E + S + + + + A+ H D TT N GTF LL + Sbjct: 71 -EPLDSTILIEKIWHLASPASPYHYQN-----DPIRTTRVNYEGTFNLL----------N 114 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMP-----YNPSSPYSATKASSDYLVLAWGHT 174 K + L ST EVYG L EDMP ++P + YS K ++ L+ ++ Sbjct: 115 LAKSHNSKMLFASTSEVYGETTNYLQEEDMPVKLSTFSPRACYSEGKRIAETLINSYREK 174 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 Y + + ++ N YGP ++I I + + G + +YGDG+ R + YV D + Sbjct: 175 YNLEIRIARIFNTYGPRLNINDGRVISNFIKQCLTGDKLTIYGDGRQTRSFCYVSDLIEG 234 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L LVL + NIG E I + I +++ + Y L D P + Sbjct: 235 L-LVLMESNYNYPINIGNEEEISIIKLADLIKNIINKNVIFEYRKLPL-----DDP---K 285 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R ++ K + W P+ + GL+KT+ Y Sbjct: 286 RRKPCLNRAKKYLNWSPKVTLIEGLHKTISSY 317 >gi|54401414|gb|AAV34499.1| GDP-mannose dehydratase [Citrobacter freundii] Length = 372 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 38/354 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F+ D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTGRVDHIYQDPHLGNPKFNLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDTSNLTRILKEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVREIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAMANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLD-----ALIPKSYSHTELIR 282 ++L++ + G +Y++ E + ++ F D ++ H Sbjct: 239 MMLQQEQPEDFVIATGVQYSVRDFVEMSAAQLGIKLSFEGDGVNEKGIVASVTGHDAPGV 298 Query: 283 FIED----------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + D RP D SK ++GW P+ ++ + + V L+ Sbjct: 299 KVGDVIVEVDPRYFRPAEVETLLGDPSKAHEKLGWKPEITLQEMVAEMVASDLE 352 >gi|257865630|ref|ZP_05645283.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC30] gi|257871966|ref|ZP_05651619.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC10] gi|257799564|gb|EEV28616.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC30] gi|257806130|gb|EEV34952.1| NAD-dependent epimerase/dehydratase [Enterococcus casseliflavus EC10] Length = 325 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 36/336 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGS LC L+ D+ +V +D L+ G ++++ + F F I D Sbjct: 13 KFLVTGGAGFIGSNLCEALL-DMGHKVRCLDNLS-NGFYDNIQPFINNKNFEFFNGTITD 70 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E +A D +++ AA V RSI + NI GT ++E + Sbjct: 71 YEVCNNACNGV--DYVLHQAAWGSVPRSIEMPVYYEEVNIKGTVNMME---------AAV 119 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K +F+ S+ VYG E N SPY+ TK + + YG+ + Sbjct: 120 KNKVKKFVYASSSSVYGDSPILPKVEGNEGNVLSPYALTKKVDEEYGKIYSKIYGLETVG 179 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +G P +IP I +I V ++GDG RD+ Y+++ + A Sbjct: 180 LRYFNVFGRRQNPNGAYAAVIPKFIGSLIAQESVSIHGDGNQSRDFTYIDNVIEANLKAA 239 Query: 238 KKGRI--GERYN--IGGNNERKNIDIVFE---IGFLLDALIPKSYSHTELIRFIEDRPGH 290 + G+ YN +GG R +++++F + LD + P ++ +R G Sbjct: 240 CSSNVTSGKAYNVAVGG---RISLNMLFSRICLELSLDKIQP---------IYVPERKGD 287 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + K E+G+ + E GL +T+ WY + Sbjct: 288 VKHSMANIELAKKELGYSASISFEKGLRETIRWYCE 323 >gi|237716157|ref|ZP_04546638.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D1] gi|237721155|ref|ZP_04551636.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|262407769|ref|ZP_06084317.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|294647246|ref|ZP_06724844.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|298480904|ref|ZP_06999099.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D22] gi|229443804|gb|EEO49595.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D1] gi|229449990|gb|EEO55781.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_2_4] gi|262354577|gb|EEZ03669.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|292637426|gb|EFF55846.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|298272927|gb|EFI14493.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D22] Length = 356 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 52/298 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 RDW Y +D++ ++L+L K+ I R+ G Sbjct: 225 DARRDWGYAKDYIECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 NE K ID+ G L + PK + RP + D +K K+ +GW P Sbjct: 285 NE-KGIDVA--TGKSLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWDP 328 >gi|53804758|ref|YP_113616.1| GDP-mannose 4,6-dehydratase [Methylococcus capsulatus str. Bath] gi|53758519|gb|AAU92810.1| GDP-mannose 4,6-dehydratase [Methylococcus capsulatus str. Bath] Length = 372 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 59/359 (16%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQVD 58 ++TG G G+ L +L+ +V I + T N + + + Q F D Sbjct: 7 LITGVTGQDGAYLSEFLLGK-GYEVHGIKRRTSLFNTDRIDHLYQDPHVKDRRFILHHGD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +++ QPD I N AA+SHV S + + IG +LE R+ L Sbjct: 66 LTDSTSLVRIIQKVQPDEIYNLAAQSHVAVSFEEPEYTANADGIGALRILEAIRI----L 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK R+ Q ST E+YG + + E P+ P SPY+ K + ++ + + YGI Sbjct: 122 GMEKKA--RYYQASTSELYGLVQEVPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGIY 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI R+ G LY G+ +RDW + D+V + Sbjct: 180 ACNGILFNHESPVRGETFVTRKITRAIARIALGLQECLYLGNLSALRDWGHARDYVEMQW 239 Query: 235 LVLKKGR-------IGERYNI-----------------GGNNERK--------NIDIVFE 262 L+L++ + G +Y++ G E + N D+ + Sbjct: 240 LMLQQDQPDDFVIATGVQYSVRQFVDFAAEELGISLAWEGEGESETGRVVAVSNKDVKVK 299 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G ++ + P+ + TE+ + D+SK + ++GW PQ ++ + + V Sbjct: 300 AGDVIVRVDPRYFRPTEVETLLG-----------DASKAREKLGWRPQTSLRELVKEMV 347 >gi|118581804|ref|YP_903054.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] gi|118504514|gb|ABL00997.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM 2379] Length = 311 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 37/336 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS LC L+N+ V+ +D + G+ +++ + ++ F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLCERLLNEGH-DVICLDNF-FTGSKDNIIHLMDNHRFELVRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L E D I N A + + T+++GT + L Sbjct: 59 -----QPILLEV--DRIYNLACPASPIHYQYNPVKTTKTSVMGTI----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + R LQ ST EVYG +E+ P S Y K ++ L++ + Sbjct: 102 AKRVKARILQASTSEVYGDPQIHPQTEEYWGNVNPIGIRSCYDEGKRVAETLMMDYYRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP +++ I + + + +YGDG R + YV D V + Sbjct: 162 NVDIRIIRIFNTYGPRMAENDGRVVSNFILQALRNQDITVYGDGSQTRSFCYVSDLVEGM 221 Query: 234 YLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 +++ +G IG N+G E F + L + +I ++ +++I F E Sbjct: 222 IRMMENDQGFIGP-VNLGNPGE-------FTMLELAEKVIEQTGCSSKII-FAELPQDDP 272 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ D S + +GW P ++ GLN + ++ N Sbjct: 273 KQRQPDISLARQWLGWEPAVQLDEGLNMAIAYFRKN 308 >gi|308275073|emb|CBX31672.1| Probable GDP-mannose 4,6-dehydratase [uncultured Desulfobacterium sp.] Length = 372 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 18/248 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ---SNLFSFL--Q 56 + ++TG G G+ L +L+ I V I + N + + + Q SF+ Sbjct: 14 KALITGITGQDGAYLAEFLIEKGYI-VHGIKRRASLFNTDRIDHLYQDPHEGRMSFVLHY 72 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N AA+SHV S + + +GT +LE R+ Sbjct: 73 GDLTDSTNLIRIIQEVQPDEIYNLAAQSHVQVSFETPEYTANADGLGTLRILEAIRI--- 129 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +K+ RF Q ST E+YG + + E P+ P SPY+A K + ++ + + YG Sbjct: 130 -LGMEKRT--RFYQASTSELYGKVQEVPQRESTPFYPRSPYAAAKLYAYWITVNYREAYG 186 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVR 231 N+ P F + I A+ R+ G +FL G+ ++RDW + +D+V Sbjct: 187 YFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQKKIFL-GNLDSLRDWGHAKDYVE 245 Query: 232 ALYLVLKK 239 A +L+L++ Sbjct: 246 AQWLILQQ 253 >gi|294809634|ref|ZP_06768326.1| GDP-mannose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|294443177|gb|EFG11952.1| GDP-mannose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] Length = 356 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 52/298 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 RDW Y +D++ ++L+L K+ I R+ G Sbjct: 225 DARRDWGYAKDYIECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 NE K ID+ G L + PK + RP + D +K K+ +GW P Sbjct: 285 NE-KGIDVA--TGKSLVEVDPKYF-----------RPSEVEQLLGDPTKAKTLLGWDP 328 >gi|254881656|ref|ZP_05254366.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|319643041|ref|ZP_07997674.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] gi|254834449|gb|EET14758.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|317385322|gb|EFV66268.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] Length = 360 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + ++ QPD I N AA+SHV S + + + Sbjct: 53 VRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 112 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 113 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 166 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G +F + I LA R+ +G LY G+ Sbjct: 167 YGFWITKNYRESYGMFAVNGILFNHESERRGE-NFVTRKITLAAARIAQGYQDKLYLGNL 225 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 ++RDW Y +D+V ++++L+ GE + + G Sbjct: 226 DSLRDWGYAKDYVECMWMILQHDTPEDFVIATGEYHTVREFCTLAFKEVGIELRWEGKGV 285 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + ID+ G L A+ PK + RP + D +K K+ +GW P++ Sbjct: 286 DERGIDVA--TGKELVAVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 332 >gi|320354254|ref|YP_004195593.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM 2032] gi|320122756|gb|ADW18302.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM 2032] Length = 321 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+N+ VL +D Y+G +++ + + F ++ D+ Sbjct: 8 RVLVTGGAGFLGSHLCERLLNE-NCDVLCLDNF-YSGTKDNVAHLLNNPFFELIRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIFNLACPASPIHYQWDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG + E P S Y K ++ L + +G Sbjct: 109 KRTKAKIFQASTSEVYGDPEVHPQPESYWGRVNPIGIRSCYDEGKRCAETLFFDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + + N YGP P +++ I + + G + +YGDG R + YV+D + + Sbjct: 169 LEIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGEDITIYGDGLQSRSFCYVDDLIEGFM 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + N+G +E F I L + ++ ++L+ +D P Sbjct: 229 RMMASPQEVTGPINMGNPDE-------FTIRQLAETILAMVGGTSKLVFKPLPQDDP--- 278 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + ++ +GW PQ + +GL T+ ++ Sbjct: 279 RQRQPDITVARTVLGWQPQVRLAAGLEPTIAYF 311 >gi|221640108|ref|YP_002526370.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] gi|221160889|gb|ACM01869.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] Length = 328 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 95/334 (28%), Positives = 144/334 (43%), Gaps = 56/334 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFL-QVDIC 60 R++VTGGAG+IGS C+ L + + D L+ Q+ F L D+ Sbjct: 4 RVLVTGGAGYIGSHACKVL-KRAGFEPVTFDNLSTG--------WEQAVKFGPLAHGDLM 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR I +AL+ ++P A+++FAA S V S+ + N+ G LLE T ++ Sbjct: 55 DRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEAT------VAA 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI--- 177 K+ F+ ST YG D + ED P P + Y A+K + + +V +G +G+ Sbjct: 109 GVKN---FVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHT 165 Query: 178 -----PVLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVFL--YG------DGQNVRDW 223 V ++ G H PE LIPL + + G L +G DG +RD+ Sbjct: 166 IFRYFNVAGADPEGEVGEQHDPETHLIPLMLD-AVAGRRPALTVFGTDYPTRDGTCIRDY 224 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI----GFLLDALIPKSYSHTE 279 ++V D A L L R GG N VF + GF + +I +S + T Sbjct: 225 VHVMDLAHAHVLGLN------RLLDGGPNR------VFCLGTGRGFSVREVIEQSRAVTN 272 Query: 280 L---IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I F R G S + E+GW P+ Sbjct: 273 REVPILFGGRRSGDAAALVCGSERAVRELGWEPE 306 >gi|325694391|gb|EGD36303.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK150] Length = 347 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 148/346 (42%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLE---VMQECGV 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRAGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K + +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARKILGWQPKFDNIETIIETAWKWH 336 >gi|255641885|gb|ACU21211.1| unknown [Glycine max] Length = 348 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 38/328 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 35 MRILVTGGAGFIGSHLVDRLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 93 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 94 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 136 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 137 AKRVGARILLTSTSEVYG--DPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 194 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 195 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVSDLVD 254 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G N+G E ++ + L++ + I+ +E+ P Sbjct: 255 GLIRLMEGSNTGP-INLGNPGEFTMTELAETVKELINPGVE--------IKMVENTPDDP 305 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNK 319 R+ D +K K +GW P+ + GL + Sbjct: 306 RQRKPDITKAKELLGWEPKVKLRDGLPR 333 >gi|225619095|ref|YP_002720321.1| GDP-D-mannose dehydratase [Brachyspira hyodysenteriae WA1] gi|225213914|gb|ACN82648.1| GDP-D-mannose dehydratase [Brachyspira hyodysenteriae WA1] Length = 333 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 17/257 (6%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + L++ QPD I N AA+SHV S + +GT LL+ + Sbjct: 63 DLSDSSNLSRILEKIQPDEIYNLAAQSHVRVSFDMPEYTADVTGLGTIRLLDAIK----- 117 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + + +F Q ST E+YG + + +E P+ P SPY+ K S ++ + + +Y + Sbjct: 118 ---ETQIKTKFYQASTSELYGKVVETPQTEKTPFYPRSPYACAKVYSYWITVNYRESYDM 174 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F K I AI R++ LY G+ + RDW Y +D+V A+ Sbjct: 175 YACNGILFNHESPRRGETFVTKKITHAIARILNKEQDKLYLGNLDSKRDWGYAKDYVEAM 234 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L+L++ + + Y I E ++ + F L L K Y + + RP Sbjct: 235 WLMLQQEK-ADDYVI-ATGETHSVREFLDEAFGLVGLDWKKYVEIDPRYY---RPAEVDL 289 Query: 294 YAIDSSKIKSEIGWFPQ 310 D +K K ++GW P+ Sbjct: 290 LLGDPTKAKEKLGWKPK 306 >gi|88604091|ref|YP_504269.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] gi|88189553|gb|ABD42550.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] Length = 417 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 28/273 (10%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL---FSFLQVDI 59 +++TG +GF GS L R L+ D +V + + G + K +SQ + ++++ + Sbjct: 8 VLITGVSGFAGSYLARDLL-DKGARVYGMVRRRSDGTIP--KNVSQKKIERAITYVEAGL 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS--C 117 D I +A+ +PD I + AA+S V RS E N +GT LLE R+ + Sbjct: 65 EDLTGIANAIDSAEPDYIFHLAAQSFVPRSFSHPLETAQINGLGTNNLLEAVRMKGADPV 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGL--------------FSEDMPYNPSSPYSATKAS 163 L + L IS+DE Y L + E+ P P SPY+ +K Sbjct: 125 LVFAGTSEEYGLVISSDEQYTRLKEKYGNIFPEPDTIPELPIHENNPLRPMSPYAVSKVY 184 Query: 164 SDYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAIT--RMIEGSHVFLYGDGQ 218 DYL + +TYG+ ++S N+ G F +I ++ R E + + G+ Sbjct: 185 GDYLFRNYFYTYGLKGIVSRAFNHEGAGRGIQFVTSVITSQVSHFRCNEADKITI-GNVN 243 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGERYNIGGN 251 RDW +++D V L+ KG+ G+ YN G N Sbjct: 244 AFRDWSHIDDIVHGYELLAMKGKPGDVYNQGSN 276 >gi|257898211|ref|ZP_05677864.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] gi|257836123|gb|EEV61197.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] Length = 329 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +E+ P +P +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITENTPTDPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G N + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSNKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREILGWKPE 305 >gi|222148125|ref|YP_002549082.1| dTDP-glucose 4-6-dehydratase [Agrobacterium vitis S4] gi|221735113|gb|ACM36076.1| dTDP-glucose 4-6-dehydratase [Agrobacterium vitis S4] Length = 331 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 52/338 (15%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS +C L+N+ V+ +D L G +++ + + SF++ D Sbjct: 8 LVTGGAGFLGSHVCARLLNE-GCDVVCLDNLQ-TGRRKNIEPLLANPKLSFIKAD----- 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 +R L + D I N A + + + + N++G +L+ L +C + Sbjct: 61 -VRDPLPQGVYDEIWNLACPASPPQYQIDPVGTMLINVLGMKNVLD---LAVACGA---- 112 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHTYG 176 R Q ST E+YG D + + Y P + Y K +++ L + +G Sbjct: 113 ---RVFQASTSEIYG--DPQVHPQTESYRGAVNTIGPRACYDEGKRAAETLCFDYHRQHG 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P+ +++ I R +E + + LYG G R + YV+D + + Sbjct: 168 VEIKVVRIFNTYGPNMDPQDGRVVSNFIVRALEEAPLELYGGGTQTRSFCYVDDLIEGFF 227 Query: 235 LVLKK-GRIGERYNIGGNNE---RKNIDIVFEI----GFLLDALIPKSYSHTELIRFIED 286 +++ I NIG E R+ DI+ E+ ++D +PK L+R Sbjct: 228 RLMRSDASITGPVNIGDPGEFTVRELADIILEMTGSRSVIVDRPLPKD---DPLLR---- 280 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RP D + +GW P+ + GL +++ ++ Sbjct: 281 RP--------DITLAGQLLGWEPKVRLREGLKRSIPYF 310 >gi|52082327|ref|YP_081118.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787718|ref|YP_093547.1| hypothetical protein BLi04041 [Bacillus licheniformis ATCC 14580] gi|319648201|ref|ZP_08002418.1| GalE protein [Bacillus sp. BT1B_CT2] gi|52005538|gb|AAU25480.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52350220|gb|AAU42854.1| GalE [Bacillus licheniformis ATCC 14580] gi|317389836|gb|EFV70646.1| GalE protein [Bacillus sp. BT1B_CT2] Length = 329 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 153/355 (43%), Gaps = 60/355 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ + V++ID NL + E + SF D+ Sbjct: 1 MAILVCGGAGYIGSHAVAELLSRNE-DVVIID------NLQTGHEEAALKGASFYNGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R +E +A+++FAA+S V S+ ++ N+ G LL+ + Sbjct: 54 DEAFLRKVFQENDIEAVMHFAADSLVGESVTDPLKYYDNNVYGAVCLLKVMK-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYG 176 +F QI ST YG D+ E P +P++PY TK + + + L W YG Sbjct: 106 ----EFDVKQIVFSSTAATYGEPDRVPIMETDPTDPTNPYGETKLAIEKM-LKWSEKAYG 160 Query: 177 IPVLLSNCSNNYGPY--------HFPEK-LIPLAITRMI-EGSHVFLYG------DGQNV 220 I ++ N G + H PE LIP+ + + + + ++G DG + Sbjct: 161 IRHVVLRYFNVAGAHVDGLIGEDHQPETHLIPIILQVALGKRDKIMIFGDDYPTPDGTCI 220 Query: 221 RDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 RD+++V D V A L +++ R G YN+G ++V + IP + Sbjct: 221 RDYIHVMDLVDAHILAVERLRNGGESAVYNLGNGTGFSVKEVVETARKVTGCPIPAEVA- 279 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWW 331 E R G + S K E+GW P+ +E+ +D+ W W Sbjct: 280 -------ERRAGDPAQLIASSEKAVKELGWQPKYAELET--------IIDSAWKW 319 >gi|320547759|ref|ZP_08042043.1| UDP-glucose 4-epimerase [Streptococcus equinus ATCC 9812] gi|320447519|gb|EFW88278.1| UDP-glucose 4-epimerase [Streptococcus equinus ATCC 9812] Length = 332 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/350 (25%), Positives = 153/350 (43%), Gaps = 54/350 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ + +V+V+D L G+ ++ ++ F Q D+ Sbjct: 1 MSILVLGGAGYIGSHMVDRLIEKGEEKVVVVDSLV-TGHRAAVHPDAK-----FYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R E P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFTE-NPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMIKLLEVMNEFGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG D+ E P P +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPDELPIKETTPQRPINPYGESKLMMETIMRWADQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQ 218 GI P+ N + + G H PE L+P+ I ++ +G + ++G DG Sbjct: 162 GIKFVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGNDYNTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 NVRD+++ D A L L++G +N+G + N+ I+ + IP Sbjct: 221 NVRDYVHPFDLADAHLLAVKYLREGNPSTAFNLGSSTGFSNLQILEAARKVTSKEIPAEL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K + +GW PQ +++E + W+ Sbjct: 281 A--------DRRPGDPDTLIASSDKAREILGWKPQFDDIEKIIASAWAWH 322 >gi|218289106|ref|ZP_03493342.1| UDP-glucose 4-epimerase [Alicyclobacillus acidocaldarius LAA1] gi|218240689|gb|EED07868.1| UDP-glucose 4-epimerase [Alicyclobacillus acidocaldarius LAA1] Length = 337 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/355 (24%), Positives = 147/355 (41%), Gaps = 44/355 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDIC 60 ++VTG AG+IGS C L+ ++ ID + +LK +++ F VD+ Sbjct: 2 ILVTGAAGYIGSHTCVALLES-GYDIVAIDNFANS-KPEALKRVAEITGKAFPVHSVDML 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + + A+++FA V S+ + N+ T LLE S Sbjct: 60 DAHALDEVFRTYAFRAVIHFAGLKAVGESVAQPLRYYRNNLGSTLNLLE---------SM 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTYGI 177 + + + S+ VYG+ ++ EDMP +P +PY TKA + + V + +G Sbjct: 111 LRHGVTKIVFSSSATVYGAANEMPLKEDMPISPVNPYGQTKAMIEQILRDVASATEDFGA 170 Query: 178 PVLL------SNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNVRD 222 +L ++ S G P P L+P +A + + V ++G DG VRD Sbjct: 171 ALLRYFNPVGAHPSGRIGEDPQGIPNNLVPYVAQVAVGKRPEVVVFGGDYPTPDGTGVRD 230 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D HVRAL V+ E +N+G ++++ IP Sbjct: 231 YIHVMDLASGHVRALDWVMSHAG-AEAFNLGTGKGSSVLEVIRAFERASGRKIP------ 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 R RPG D SK + +GW +++++ T W N + P Sbjct: 284 --YRIGPRRPGDAAVSYADPSKAERVLGWKATQDLDAMCRDTWHWQSQNPNGYDP 336 >gi|182434767|ref|YP_001822486.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463283|dbj|BAG17803.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 325 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 68/343 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R +V + +V+V+D S + L D+ Sbjct: 1 MTWLITGGAGYIGAHVARAMVAAGE-RVVVLDD-------------GSSGIADRLPGDVT 46 Query: 61 -------DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DR + L E +V+ AA+ V S+ + N+ G +LLE Sbjct: 47 PVTGSTSDRALLDRVLAEHAVGGVVHLAAKKQVGESVEKPLLYYRENVAGLAVLLE---- 102 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + ++ + RFL S+ VYG D L +E+ P P +PY TK + ++LV A G Sbjct: 103 --AVVAAGVR---RFLFSSSAAVYGVPDADLITEETPCLPINPYGETKLAGEWLVRATGK 157 Query: 174 TYGIPVLLSNCSN--NYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQ 218 +G L + C N PE ++P+ R+ G ++G DG Sbjct: 158 AHG---LSTACLRYFNVAGAAAPELADTGVFNIVPMMFERLTRGEAPRIFGDDYPTPDGT 214 Query: 219 NVRDWLYVEDHVRALYLVLKK----GRIGERYNIG---GNNERKNIDIVFEIGFLLDALI 271 VRD+++V D A V ++ G N+G G + R+ D++ E+ Sbjct: 215 CVRDYIHVADLAEAHLAVARRLDGAGAGDLTLNVGRGEGVSVREMADVIREV-------- 266 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDS-SKIKSEIGWFPQENM 313 + + + +E R D A+ S ++I E+GW + + Sbjct: 267 ----TGSAVKPVVEPRRAGDAPKAVASAARIAGEVGWTARRGV 305 >gi|147676776|ref|YP_001210991.1| UDP-glucose 4-epimerase [Pelotomaculum thermopropionicum SI] gi|146272873|dbj|BAF58622.1| UDP-glucose 4-epimerase [Pelotomaculum thermopropionicum SI] Length = 328 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 50/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++V+GGAG+IGS R L+ V+V+D LT + + + ++ D Sbjct: 1 MNVLVSGGAGYIGSHTVRELIKRNHF-VVVLDNLTKWHRAAVQGAELVAG---------D 50 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 DRE +R +++ +A+++FAA S V S+ E+ N++ L++ Sbjct: 51 TADRELLRGLFRKYGIEAVMHFAASSLVGESVRRPSEYYYNNVVKGLSLMDAM------- 103 Query: 119 SQDKKDQFRFLQIS-TDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RFL S T VYG + +E P NP++PY ATK + + + +G YG+ Sbjct: 104 ---VEAGVRFLIFSSTAAVYGEPREVPITEAHPANPTNPYGATKLAVEGAMRWYGEAYGL 160 Query: 178 P--------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVR 221 ++ + + G H PE LIPL + T + + +YG DG +R Sbjct: 161 RYASLRYFNAAGADPAGDIGEDHDPETHLIPLVLKTALGLLPRLEVYGTDYPTPDGTCIR 220 Query: 222 DWLYVEDHVRALYLVLKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++V D A L L+ YN+G + +++V + IP Y Sbjct: 221 DYIHVSDLAEAHVLALEALAAGAPSAVYNLGNGSGYSVLEVVRAAEEVTGRPIPVHYG-- 278 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G S KIK+++GW P+ Sbjct: 279 ------PRRAGDPSVLVAGSEKIKADLGWRPR 304 >gi|300313479|ref|YP_003777571.1| UDP-galactose-4-epimerase [Herbaspirillum seropedicae SmR1] gi|300076264|gb|ADJ65663.1| UDP-galactose-4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 357 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 39/344 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 +VTG AGFIGS L L+ L +V+ +D + + NL+ +K + Q F F++ D Sbjct: 20 LVTGVAGFIGSNLLETLLK-LNQRVVGLDNFSTGFQHNLDEVKALVTPEQWANFRFVEGD 78 Query: 59 I-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEE 110 I C AL + +++ AA V RSI ++ ITTN I G +L Sbjct: 79 IRKLDDCRAAMHHEALGSNIVEYVLHQAALGSVPRSI---EDPITTNQNNIDGFLNMLVA 135 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R D + + RF+ ++ YG ED P SPY+ TK ++ Sbjct: 136 AR--------DARVK-RFVYAASSSTYGDHPGLPKVEDRIGKPLSPYAVTKFVNELYADV 186 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + TYG+ + N +G P+ +IP I I+G +++ GDG+ RD+ YV Sbjct: 187 FARTYGLQTIGLRYFNIFGRRQNPDGAYAAVIPKWIAAAIKGEQIYINGDGETSRDFCYV 246 Query: 227 EDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR- 282 ++ V+A L L+ + YN+ +R + +++ FL D L ++ H + Sbjct: 247 DNAVQANLLAACTLQDEAANQVYNV-AVGDRTTLKELYQ--FLRDNL-SATFPHLRDAQP 302 Query: 283 -FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 F E R G R D K + +G+ P + GL +++ WY+ Sbjct: 303 IFREFRAGDVRHSLADIGKGRRLLGYEPSHRIGRGLKESMNWYV 346 >gi|294055946|ref|YP_003549604.1| GDP-mannose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293615279|gb|ADE55434.1| GDP-mannose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 372 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 38/356 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 + ++TG G GS L +L+ +V I + + + N + I + + F Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRSSSLNTERVDHIYEDPHIENARFHLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + + E QPD + N A+SHV S + + IGT LLE R Sbjct: 62 GDLTDTSNLTRIISEVQPDEVYNLGAQSHVAVSFESPEYTADVDAIGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E++G + + E P+ P SPY+A K + ++ + + +YG Sbjct: 119 -LGLEKKT--RFYQASTSELFGLVQEIPQRETTPFYPRSPYAAAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ + +G LY G+ +RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRALANIAQGLEKCLYLGNMDALRDWGHAKDYVRM 235 Query: 233 LYLVLKK-----------GRIGERYNIGGNNERKNIDIVF------EIGFLLDALIPKSY 275 +++L++ +I R + + I++ F E ++ K+ Sbjct: 236 QWMMLQQDEAEDFVIATGKQISVREFVTMSAREAGIELEFSGEGVEETATVVSVDATKAP 295 Query: 276 SHTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + ++ P + R + D +K K ++GW P+ +E + V LD Sbjct: 296 AVSVGDVVVKVDPRYFRPAEVETLLGDPTKAKEKLGWVPEITVEEMCAEMVASDLD 351 >gi|54401438|gb|AAV34519.1| GDP-mannose dehydratase [Salmonella enterica subsp. salamae serovar Greenside] Length = 372 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 ++TG G GS L +L+ +V I + N + I S + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASLFNTERVDHIYQDPHSSNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|46446936|ref|YP_008301.1| putative UDP-glucose 4-epimerase [Candidatus Protochlamydia amoebophila UWE25] gi|46400577|emb|CAF24026.1| putative UDP-glucose 4-epimerase [Candidatus Protochlamydia amoebophila UWE25] Length = 322 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 149/334 (44%), Gaps = 54/334 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + +++ GGAG+IGS + + ++N + +V+D L+ S+K + +F+Q D+C Sbjct: 4 LTILIVGGAGYIGSHVNK-MLNLMGYHTIVVDNLSRG----SIKTVLHG---TFVQGDLC 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +++ DA+++FAA V S++ ++ N++ T LL + + + Sbjct: 56 DPLFLNQLFQKYSIDAVMHFAAYIDVGESVVNPAKYYQNNVVNTLNLL-------TAMVK 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + F F ST ++G E P +P +PY TK + ++ + YG+ Sbjct: 109 SQVKTFIF--SSTAAIFGYPLSNKIGESHPCHPINPYGETKWVVEKMLRDFEQAYGLKYS 166 Query: 181 LSNCSNNYGPYHFPE-----------KLIPLAITRMI-EGSHVFLYG------DGQNVRD 222 N G PE LIPL + + E + +YG DG +RD Sbjct: 167 CLRYFNAAGG--DPEGKIKNYQTKSSNLIPLILKSLQHETESITIYGTDYATPDGTCIRD 224 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++++D H++AL +L G YN+G + +++ + +L+ Sbjct: 225 YIHIQDLGHAHIKALEQLL-NGSSSTSYNLGNGSGFSVKEVIQTVEKVLN---------- 273 Query: 279 ELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 + + FIE RPG D+ K S + W PQ Sbjct: 274 KKVSFIEGARRPGDPPILLADTQKAASLLNWHPQ 307 >gi|315186823|gb|EFU20581.1| NAD-dependent epimerase/dehydratase [Spirochaeta thermophila DSM 6578] Length = 311 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 42/333 (12%) Query: 1 MRLI-VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-FSFLQVD 58 MR + VTGG GFIGS L LV V V+D NL++ ++ + ++L + D Sbjct: 1 MRTVCVTGGCGFIGSHLVEALVEK-GCTVKVLD------NLSTGRKENIAHLDVELYEGD 53 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT---NIIGTFILLEETRLWW 115 I D + + AL D I + AA+ V SI ++ +TT N+ GT +LE +L Sbjct: 54 IRDPDEVVRALHGV--DTIFHLAAQISVPASI---EDPLTTEEINVRGTLNVLEAAKL-- 106 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG + DM P SPY+ TK + +Y V + Sbjct: 107 -------HNVSTVVFASSAAVYGDSPECPKRLDMIPQPVSPYAITKLAGEYYVAMYQRLC 159 Query: 176 GIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 GI + + N +G P +P I+R ++G + ++GDG+ RD++YV+D V Sbjct: 160 GIRGVSARFFNVFGERQDPSSGYAAAVPAFISRALKGDPLTIFGDGEQTRDFIYVKDLVA 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + ++G YNIG I L +I + ++ + RPG Sbjct: 220 YLIALAEEGE--GLYNIGYGT-------YITINQLARTIISLCGTEASIV-YTNPRPGDV 269 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +I S P E GL +T+ W+ Sbjct: 270 RYSYADVDRITSL--SVPLIGFEEGLQRTIEWF 300 >gi|297191432|ref|ZP_06908830.1| nucleotide-sugar dehydratase [Streptomyces pristinaespiralis ATCC 25486] gi|297150921|gb|EFH30870.1| nucleotide-sugar dehydratase [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 133/332 (40%), Gaps = 35/332 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ D V +D + G ++ + F F++ + + Sbjct: 13 VVTGGAGFVGSHLCTALL-DSGTAVTCVDDFS-TGRPENISALRDRPGFQFVRASVSEPF 70 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + E D +++FA+ + + + +GT L + + Sbjct: 71 TV-----EPPADLVLHFASPASPADYLRLPLHTLDAGSLGTRNALALAHGFGA------- 118 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST EVYG + +E P P S Y K + L A G Sbjct: 119 ---RFMLASTSEVYGDPQQHPQNERYWGNVNPVGPRSVYDEAKRFGEALTTAHADANGTD 175 Query: 179 VLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P + + + G + + GDG+ R YV+D V + Sbjct: 176 TGIVRLFNTYGPRMRGHDGRAVPTFVRQALAGEPLTVSGDGRQTRSLCYVDDTVGGILAA 235 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY-A 295 G G NIG E +D L LI + + IRF+E RP D Sbjct: 236 AAHGLRGP-VNIGNPTEITMLD--------LARLIIELTGSSSEIRFVE-RPTDDPAVRC 285 Query: 296 IDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D + + ++ W P + E GL +T+ W+ D+ Sbjct: 286 PDITLARDKLEWEPSVSAEQGLRRTIAWFRDH 317 >gi|289577898|ref|YP_003476525.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] gi|289527611|gb|ADD01963.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] Length = 288 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 22/274 (8%) Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F DI D + LK+ +PD +++ AA+ V +SI NI+GT LLE R Sbjct: 17 FFNKDITDDDLC-EILKKEKPDYVIHQAAQIDVQKSIDNPVFDTKVNILGTVNLLECCR- 74 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 K + + S+ VYG+ + E NP S Y +K ++++ + Sbjct: 75 --------KSGVKKVIYASSAAVYGNPEYLPIDEGHRINPISSYGISKHTAEHYFEVYSQ 126 Query: 174 TYGIPVLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 Y + + +N YG P+ +I + +M++G ++GDG RD++YV+D Sbjct: 127 LYDLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGKRPVIFGDGNQTRDFVYVKDVA 186 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 +A L L++G E NI N ++V + +++ + Y+ E R G Sbjct: 187 KANLLALERGD-NEVVNISTNKPTSINELVEIMNKIMNTSLEPIYT--------EPRKGD 237 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D+ K IGW P+ ++E GL + + +Y Sbjct: 238 IVHSYLDNKKALDVIGWRPEYSLEDGLREIIEYY 271 >gi|300770430|ref|ZP_07080309.1| NAD-dependent epimerase/dehydratase [Sphingobacterium spiritivorum ATCC 33861] gi|300762906|gb|EFK59723.1| NAD-dependent epimerase/dehydratase [Sphingobacterium spiritivorum ATCC 33861] Length = 330 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TG AGF+GS LC R+++ D V+ +D L G++ +++ + + + F F D+ Sbjct: 8 RILITGAAGFLGSHLCDRFILEDY--HVIGMDNLI-TGDIRNIEHLYKLDHFEFYHHDVS 64 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L D I++FA+ + + + + +GT LL R Sbjct: 65 KFVHVPGHL-----DYILHFASPASPVDYLRIPIQTLKVGSLGTHNLLGLAR-------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 R L ST E+YG SED P P Y K + + +A+ + + Sbjct: 112 --AKNARILVASTSEIYGDPTVSPQSEDYWGNVNPVGPRGVYDEAKRFQEAMTMAYHNFH 169 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + N +GP + +P I + + G + ++GDGQ R + YV D V + Sbjct: 170 ELQTRIVRIFNTFGPRMRLNDGRAVPAFIAQALRGEDLTVFGDGQQTRSFCYVSDQVEGI 229 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 + L + NIG E + EI LI S S + P R Sbjct: 230 FKTL-HADCADPINIGNPEEITLQQLAEEI-----LLITNSKSKIIYQPLPAEDPKQRRP 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK K + W P + + GL +T+ +Y Sbjct: 284 ---DISKAKRMLNWEPVISRKQGLEQTIAYY 311 >gi|288572961|ref|ZP_06391318.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568702|gb|EFC90259.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 311 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 17/254 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVDI 59 +VTGGAGFIGS L L+ D V V+D + L+++ + + ++ DI Sbjct: 6 LVTGGAGFIGSHLVDLLM-DQGWNVTVVDNFDPFYDKSIKLSNIAPHRDNPKYRLVEEDI 64 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + +R L + D IV+ AA++ V SI + N+ GT +LE + Sbjct: 65 RNLPGMREKLNDSY-DVIVHLAAKAGVRPSIQDPVGYQEVNVTGTQNMLEFAK------- 116 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ +F+ S+ VYG +SED P SPY++TK S + + + H Y I Sbjct: 117 --ERNIKQFVFASSSSVYGINPNVPWSEDDHVLMPISPYASTKVSGELMGHVYSHLYDIR 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 L YGP P+ I + EG + +YGDG RD+ YVED V+ + + Sbjct: 175 FLALRFFTVYGPRQRPDLAIHKFTKLIKEGKPIPVYGDGSTRRDYTYVEDIVKGIRSAMD 234 Query: 239 KGR-IGERYNIGGN 251 + + E N+G N Sbjct: 235 YDKTLYEVINLGNN 248 >gi|225431735|ref|XP_002269917.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 429 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 35/324 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGF+GS L L+ V+V+D + G +L + +F ++ D+ Sbjct: 107 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF-FTGRKENLMHHFGNPMFELIRHDVV 164 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN++GT + L Sbjct: 165 EPILL-------EVDQIYHLACPASPVYYKFNPVKTIKTNVVGTL----------NMLGL 207 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ RFL ST EVYG + E P S Y K +++ L +A+ Sbjct: 208 AKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMAYHRGA 267 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI V ++ N YGP + +++ + + + + +YGDG+ R + YV D V L Sbjct: 268 GIEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGL 327 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +++ +G +N+G E +++ + +D + E ED P H R+ Sbjct: 328 IRLMEGEHVGP-FNLGNPGEFTMLELAQVVQETIDP-----NAKIEFRPNTEDDP-HKRK 380 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D SK K +GW P ++ +GL Sbjct: 381 --PDISKAKQLLGWEPSVSLRNGL 402 >gi|325686711|gb|EGD28737.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK72] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 72/365 (19%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVDI 59 +++VTGGAG+IGS LV + +++D L+ L+ LK I+ + SF Q + Sbjct: 3 KILVTGGAGYIGSHTVVELV-AAGYEAIIVDDLSNGSVQVLDRLKSITGREI-SFYQGSV 60 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D+ + +E DA+++FAA V S+ ++ N+ GT LLE + Sbjct: 61 ADKGFMNRVFEENHIDAVIHFAAYKAVGESVQEPLKYYENNVGGTIALLE-------VMK 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV--LAWGHT--- 174 ++K D F +T VYG + +ED+P + ++PY TK + ++ LA H+ Sbjct: 114 ENKVDHIIFSSSAT--VYGMNNISPLTEDLPTSATNPYGYTKLMMEQILTDLARAHSDWS 171 Query: 175 -----YGIPVLLSNCSN-NYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNV 220 Y P+ P P L+P IT++ G + ++G DG V Sbjct: 172 VTNLRYFNPIGAHESGMIGEAPNGIPNNLMPY-ITQVAVGKLQELSVFGNDYDTHDGTGV 230 Query: 221 RDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 RD+++V D + L LK N E K + VF +G + YS ++ Sbjct: 231 RDYIHVVDLAKGHVLALKH-----------NLENKGV-AVFNLGTGI------GYSVLDM 272 Query: 281 IRFIED-------------RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ E+ RPG D+SK +GW + KT+ + + Sbjct: 273 VKAFENVNGVKIPYVIKNRRPGDVATCYADASKANDILGWKAE--------KTLQDMMRD 324 Query: 328 NWWWR 332 +W W+ Sbjct: 325 SWRWQ 329 >gi|320107083|ref|YP_004182673.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319925604|gb|ADV82679.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 341 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 50/353 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQV 57 M +VTGG GF+GS L L+ + +V+V+D L G NLN L+ + + F F Sbjct: 1 MAYLVTGGCGFVGSNLTAELIRRGE-EVVVVDNLIRPGTPINLNWLRTLGK---FDFYHA 56 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D + + ++ + + + A + + S+ N++G+ +LE R+ Sbjct: 57 DTRNGHDLEPIFRKHSIECVFHLAGQVAMTTSLENPRRDFEVNVLGSINVLECVRI---- 112 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMP--YNPS--------------SPYSATK 161 L+ D + S+++VYG L+ + E +P + P +PY +K Sbjct: 113 LAPDAT----VVYASSNKVYGELEDCVLRE-LPTRWEPEGAKSVTERARLEFYTPYGCSK 167 Query: 162 ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYH---FPEKLI----PLAITRMIEGSHVF-L 213 ++D +L + +G+ ++ S YG F + + AI + +H F + Sbjct: 168 GAADQYMLEYARNFGVNSVVFRHSTIYGGRQISTFDQGWVGWFCQQAIETKLNPAHEFTI 227 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDAL 270 GDG+ VRD L+V D V A YL + G G+ +NIGG E N + E+ L+ Sbjct: 228 NGDGKQVRDLLHVSDAV-ACYLAAHEHAAGARGQAFNIGGGYE--NSMSLRELFLHLEKE 284 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + + EL D+ + + D+SK + + W P+ E G+ + W Sbjct: 285 VGAKMNPQELPWRANDQ----KYFVADNSKAERFLNWRPKATKEQGIADALDW 333 >gi|218528254|ref|YP_002419070.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|218520557|gb|ACK81142.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] Length = 370 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/369 (23%), Positives = 149/369 (40%), Gaps = 67/369 (18%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG L L+ +V V+D L + + + +S F++ D+ D E Sbjct: 6 LITGGAGFIGRHLASALLAR-GYRVRVLDSLIEQVHGGTGRPLSLDPAVEFVEGDVRDAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ +V+ AAE V +S+ + +++ N GT L + L + + Sbjct: 65 AVARAIAGA--THVVHLAAEVGVGQSMYAVERYVSVNDCGTATLFQA--LIEAPVQ---- 116 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM----------PYNPSSP----------------- 156 R + S+ +YG +GL+ + P P P Sbjct: 117 ---RVVVASSMSIYG---EGLYRTEADATVEDAVRPPRRPGEPWDPPDQQGRPMRPVPTP 170 Query: 157 ----------YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---P-EKLIPLAI 202 Y+ TK + L L YG+ + N YGP P ++ + Sbjct: 171 ESKRPALASVYALTKYMQERLTLTLAPAYGMEGVALRLWNVYGPGQALSNPYTGVLAIFA 230 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVF 261 R++ G ++ DG+ RD+++VED +A L L+ G+ YN+G +R V Sbjct: 231 ARLLHGQPPMIFEDGEQRRDFVHVEDVAQAFVLALEHPTAAGQVYNVGSGEDRT----VN 286 Query: 262 EIGFLLDALIPKSYSHTELIRFI--EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 E+ LL ++ E+ + + R G R D KI E+G+ P+ + GL + Sbjct: 287 EVARLLA----RAMGREEIAPQVTGQARAGDIRHCIADIGKITRELGYAPKRDFAEGLAE 342 Query: 320 TVCWYLDNN 328 W + Sbjct: 343 LAAWVAEQQ 351 >gi|226194263|ref|ZP_03789862.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei Pakistan 9] gi|225933728|gb|EEH29716.1| GDP-4-dehydro-6-deoxy-D-mannose reductase [Burkholderia pseudomallei Pakistan 9] Length = 332 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 147/330 (44%), Gaps = 34/330 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVI----DKLTYAGNLNSLKEISQSNLFSFLQVDI 59 ++TG G +GS L +L+ + ++ + L +L L I++ N + D+ Sbjct: 1 MITGITGMVGSHLADFLLENTDWEIYGLCRWRSPLDNVSHL--LPRINEKNRIRLVYGDL 58 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D I A+K+ PD + + AA+S+ S + + TN+ GT +LE L Sbjct: 59 RDYLSIHEAVKQSTPDFVFHLAAQSYPKTSFDSPLDTLETNVQGTANVLE-------ALR 111 Query: 120 QDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ D + S+ EV+G + +K E+ ++P+SPY+ +K +D + + Y + Sbjct: 112 KNNIDAVTHVCASS-EVFGRVPREKLPIDEECTFHPASPYAISKVGTDLIGRYYAEAYNM 170 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRA 232 V+ + + GP F E I + G V G+ ++R + V D VRA Sbjct: 171 TVMTTRMFTHTGPRRGDVFAESTFAKQIAMIERGLIPPVVKTGNLDSLRTFADVRDAVRA 230 Query: 233 LYLVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED----R 287 Y+++ I G YNIGG +G +LD LI S S ++IR D R Sbjct: 231 YYMLVTINPIPGAYYNIGGTYS-------CTVGQMLDTLISMSTSK-DVIRVETDPERLR 282 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGL 317 P ++ K ++ GW P+ + E + Sbjct: 283 PIDADLQVPNTRKFEAVTGWKPEISFEKTM 312 >gi|212691383|ref|ZP_03299511.1| hypothetical protein BACDOR_00875 [Bacteroides dorei DSM 17855] gi|237712174|ref|ZP_04542655.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|237726321|ref|ZP_04556802.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D4] gi|265751865|ref|ZP_06087658.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] gi|212665993|gb|EEB26565.1| hypothetical protein BACDOR_00875 [Bacteroides dorei DSM 17855] gi|229434847|gb|EEO44924.1| GDP-mannose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] gi|229453495|gb|EEO59216.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|263236657|gb|EEZ22127.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] Length = 368 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + ++ QPD I N AA+SHV S + + + Sbjct: 61 VRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 120 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 121 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 174 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G +F + I LA R+ +G LY G+ Sbjct: 175 YGFWITKNYRESYGMFAVNGILFNHESERRGE-NFVTRKITLAAARIAQGYQDKLYLGNL 233 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 ++RDW Y +D+V ++++L+ GE + + G Sbjct: 234 DSLRDWGYAKDYVECMWMILQHDTPEDFVIATGEYHTVREFCTLAFKEVGIELRWEGKGV 293 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + ID+ G L A+ PK + RP + D +K K+ +GW P++ Sbjct: 294 DERGIDVA--TGKELVAVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 340 >gi|254168270|ref|ZP_04875116.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] gi|197622779|gb|EDY35348.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] Length = 313 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 30/329 (9%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDREC 64 +TGGAGFIGS + L+ + + +VLV D L+ +G + +KE F F++ D+ D Sbjct: 1 MTGGAGFIGSHIVDALMEE-EHEVLVYDNLS-SGKIEFIKEHMGKENFKFVKADLLDFGK 58 Query: 65 IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKD 124 ++ ++ + + + AA V + N++ T+ +LE RL D KD Sbjct: 59 LKEEMEGVE--LVYHVAANPDVRLGASDTHVHLEQNVLATYNVLEAMRL------NDVKD 110 Query: 125 QFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 + ST VYG ++ E P P S Y A+K ++ + ++ HT+G+ ++ Sbjct: 111 ---IIFTSTSTVYGEANEIPTPEGYGPLIPISLYGASKLGAEAFITSYAHTFGMRAVIYR 167 Query: 184 CSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLK-KGR 241 +N GP +I I ++ H + GDG + +LYV+D V A+ K + R Sbjct: 168 FANIVGP-RSTHGVIYDFIMKLKRNPHELEILGDGTQTKSYLYVKDCVDAIIFGYKNRKR 226 Query: 242 IGERYNIGGN---NERKNIDIVFEIGFLLDALIPKSYSHTELIR-FIEDRPGHDRRYAID 297 E +NIG N RK DI+ E L D Y T R + D P + + Sbjct: 227 DVEIFNIGSEDWINVRKIADIIVEEMGLKDV----KYRFTGGKRGWKGDVP----KMLLS 278 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 KIKS GW P+ N E + T L+ Sbjct: 279 IEKIKS-YGWKPKYNSEESVRLTARHLLN 306 >gi|114777555|ref|ZP_01452536.1| NAD-dependent epimerase/dehydratase family protein [Mariprofundus ferrooxydans PV-1] gi|114552026|gb|EAU54543.1| NAD-dependent epimerase/dehydratase family protein [Mariprofundus ferrooxydans PV-1] Length = 329 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 143/334 (42%), Gaps = 35/334 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ND VL +D + G+ +++ + Q+ F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLLNDGH-DVLCVDNF-FTGSKDNIVHLMQNPHFEMMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPVHYQFDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG +G + P S Y K ++ L + +G Sbjct: 109 KRTKAKIFQASTSEVYGDPKVHPQTEGYWGHVNPVGIRSCYDEGKRCAETLFFDYHRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP P +++ I + ++G + +YGDG R + +V+D V + Sbjct: 169 LNIKVARIFNTYGPRMHPNDGRVVSNFIMQALQGLPITIYGDGSQTRSFCFVDDLVDGFV 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L+ N+G E +++ +I + S S L +D P + Sbjct: 229 RLMATDNDFTGPVNLGNPVEFTILELAQQI-----IAMTGSTSTIVLRPLPQDDPTQRQP 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D + +S +GW P ++ GL KT+ ++ D Sbjct: 284 ---DITLARSSLGWQPNVALKEGLEKTIRYFSDT 314 >gi|320163889|gb|EFW40788.1| UDP-glucuronat epimerase [Capsaspora owczarzaki ATCC 30864] Length = 571 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 145/334 (43%), Gaps = 29/334 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY-------AGNLNSLKEISQSNLFSF 54 R++VTG AGF+G +L V +D L G +NSLKE+ Sbjct: 241 RILVTGAAGFVGYHTSIHLKTRGDF-VFGLDNLNSYYDPRLKVGRMNSLKELD----VRV 295 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + D+CD E +RS +V+ AA++ V S+ +I N+ LLE + + Sbjct: 296 ITGDVCDAELLRSLFSSVDITHVVHLAAQAGVRYSLDHPLAYIRANVKCFITLLEVIKEF 355 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGH 173 + K+ + + S+ VYG K FSE D P+S Y+ATK S++ + + H Sbjct: 356 HT-----KERPIKTVYASSSSVYGLNTKQPFSETDQVDMPASLYAATKKSNEGIAHVYHH 410 Query: 174 TYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG--DG-QNVRDWLYVEDHV 230 + +P+ YGP+ P+ ++ + +Y DG + +RD+ +V D V Sbjct: 411 LHKLPLTGLRFFTVYGPFGRPDMAYYSFTASIVADKPITVYKNDDGSEMMRDFTFVSDIV 470 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + + G E +N+G NN K + L++ LI K + G Sbjct: 471 AGITACVDLGAELEVFNLGNNNPEK-------LSTLIN-LIEKGLGREAEKIYAPITAGD 522 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S K +G+ P+ ++E G++ + WY Sbjct: 523 VPSTFADVSHSKKMLGYEPKVSLEKGISIFLDWY 556 >gi|291563163|emb|CBL41979.1| UDP-galactose 4-epimerase [butyrate-producing bacterium SS3/4] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 63/366 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 MR++VTGGAG+IGS C L+ +V+V D L A LN +K+++ +L +F + D Sbjct: 1 MRILVTGGAGYIGSHTCLALLEQGH-EVVVFDNLYNASEEALNRVKKLTGKDL-TFYKAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + DA+++FA V S+ E+ NI GT ILL+ R Sbjct: 59 MLDRDAMEKIFDAEKIDAVIHFAGLKAVGESVAKPWEYYHNNITGTLILLDVMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVL-------A 170 K + + S+ VYG +E+ P ++PY TK+ + ++ Sbjct: 113 ---KHGVKKIIFSSSATVYGDPAFVPITEECPKGQCTNPYGQTKSMLEQILTDMQKADPE 169 Query: 171 WGHTYGIPVLLSNCSNNYG----------PYHFPEKLIP----LAITRMIEGSHVFLYG- 215 W V+L N G P P L P +AI ++ E V ++G Sbjct: 170 WN------VILLRYFNPVGAHESGLIGEDPEGIPNNLTPYITQVAIGKLKE---VGVFGN 220 Query: 216 -----DGQNVRDWLYV----EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL 266 DG VRD+++V E HV+AL K + YN+G + +D++ Sbjct: 221 DYDTPDGTGVRDYIHVMDLAEGHVKALKKFDDKPAV-YIYNLGTGHGYSVLDVIHAFSKA 279 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + IP +I+ R G D++K K E+GW + N++ W Sbjct: 280 VGKEIPY------VIK--PRRAGDIATCYSDATKAKVELGWEAKRNLDDMCRDAWNWQSK 331 Query: 327 NNWWWR 332 N +R Sbjct: 332 NPNGYR 337 >gi|254283906|ref|ZP_04958874.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium NOR51-B] gi|219680109|gb|EED36458.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium NOR51-B] Length = 331 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 151/332 (45%), Gaps = 30/332 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQVD 58 +VTG AGFIG+ + L+ D V+ +D L ++ +LK+ L FSF +D Sbjct: 14 LVTGAAGFIGANVSAALL-DRGYSVIGVDNLNDYYDV-ALKQYRLDGLTGRPGFSFNTLD 71 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++ + + D +V+ AA++ V S+ D +I +N++G ++E R Sbjct: 72 LANQPAVDEVFEAHPIDLVVHLAAQAGVRYSLQNPDAYIRSNVLGFQSIVENCRYH---- 127 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + F S+ VYG+ + FSE D P S Y+ATK S++ + ++ YGI Sbjct: 128 ---QPEHLVF--ASSSSVYGNNNAEWFSETDNTDTPVSLYAATKKSNELVGHSYAKLYGI 182 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + YGP P+ + TR I E + ++ GQ +RD+ Y++D + + Sbjct: 183 AMTGLRFFTVYGPAGRPD-MAYFDFTRAILENEPIRVFNRGQLMRDFTYIDDILAGVIAA 241 Query: 237 L----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 K + R GNNE + E L+ L+ K + +++ +PG Sbjct: 242 CEAPPKDQDVPFRILNLGNNEPVALGYFIET---LEQLLGKE----AIKEYVDMQPGDVY 294 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + A + + + + P +E GL K V WY Sbjct: 295 KTAANIDAARHLLHYHPTTRIEEGLGKFVDWY 326 >gi|188588217|ref|YP_001921270.1| UDP-glucose 4-epimerase [Clostridium botulinum E3 str. Alaska E43] gi|251780743|ref|ZP_04823663.1| UDP-glucose 4-epimerase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498498|gb|ACD51634.1| UDP-glucose 4-epimerase [Clostridium botulinum E3 str. Alaska E43] gi|243085058|gb|EES50948.1| UDP-glucose 4-epimerase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 329 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 156/353 (44%), Gaps = 56/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+++ V+V + LT G+ ++ + ++ F + DI Sbjct: 1 MSILVLGGAGYIGSHAVSQLIDNDYDVVVVDNLLT--GHKEAINKKAK-----FYKGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E ++ ++ +A+++FAA S V S++ ++ N+ GT LLE Sbjct: 54 DKEFLKDVFEKESFEAVIHFAANSLVGESMVDPLKYFNNNVQGTQTLLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++F I ST YG + +EDM P++PY TK + + ++ YGI Sbjct: 105 ---NEFNVKNIVFSSTAATYGEPKQIPITEDMETCPTNPYGETKLTMEKIMKWCDKAYGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + G H PE LIP+ + + + + +YG DG VR Sbjct: 162 KYVSLRYFNVAGARKGGAIGEDHNPETHLIPIVLQVALGKRDFITIYGEDYDTEDGTCVR 221 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP---KSY 275 D+++VED + A L +K G + +N+G + GF + +I K Sbjct: 222 DYIHVEDLIEAHILAMKHLLNGGDSDIFNLGSSQ-----------GFSVKEIIESARKVT 270 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDN 327 H + E R G + S K + +GW P + N+ + W+ +N Sbjct: 271 KHPIPAQIGERRAGDPSKLVASSDKARKILGWNPSRTNITKIIEDAWVWHTNN 323 >gi|47559003|gb|AAT35571.1| UDP-galactose-4-epimerase [Listeria monocytogenes] Length = 327 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 47/330 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVNELIT-RGYEVVVIDNLR-TGHRESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ +++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ D + S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 EEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 VED H++AL LK G +N+G +N F + +L+A ++ + E+ Sbjct: 225 QVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTGKEI 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 + R D I SS EI GW P Sbjct: 275 PAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|296123645|ref|YP_003631423.1| GDP-mannose 4,6-dehydratase [Planctomyces limnophilus DSM 3776] gi|296015985|gb|ADG69224.1| GDP-mannose 4,6-dehydratase [Planctomyces limnophilus DSM 3776] Length = 335 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 17/262 (6%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I+ LKE QP I + A+SHV S T +++ L RL S Sbjct: 63 DLGDTTSIQRVLKEAQPHEIYHLGAQSHVHHSF--TQPLYTADVVALGTL----RLLESA 116 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + K + RF ++ E++G +E+ P++P SPY+ +K + + YG+ Sbjct: 117 IQLAKTQEVRFYNAASSEMFGHATIVPQNEETPFHPRSPYACSKVFGYHQTINHREAYGL 176 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRA 232 +L ++ S G F + I L R+ G L G+ RDW + +D+V A Sbjct: 177 YAANGILFNHESPRRGE-QFVTRKITLGAARIKVGLQKKLALGNLDAQRDWGFAKDYVEA 235 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ G+ + NE + E F L L P Y + F RP Sbjct: 236 MWLMLQQPVPGD--YVVATNETHTVREFLEETFRLLDLDPAEYVEIDPAFF---RPSEVP 290 Query: 293 RYAIDSSKIKSEIGWFPQENME 314 D SK + E+GW P N + Sbjct: 291 VLKGDYSKAEKELGWKPATNFK 312 >gi|332827836|gb|EGK00571.1| hypothetical protein HMPREF9455_03214 [Dysgonomonas gadei ATCC BAA-286] Length = 313 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 43/335 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS LC L+N+ +VL +D + G+ ++ + + F ++ D+ Sbjct: 5 KILVTGGAGFIGSHLCERLLNEGN-EVLCLDNY-FTGSKENVIHLLSNPYFELIRHDVVH 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I N A + A + I T+++G + L Sbjct: 63 PFHVDV-------DQIYNLACPASPVHYQYNAIKTIKTSVMGAI----------NMLGLA 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 K+ + + LQ ST EVYG D + + Y NP S Y K ++ L + + Sbjct: 106 KRLKAKVLQASTSEVYG--DPHVHPQPESYWGNVNPIGIRSCYDEGKRCAETLFMDYHRQ 163 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ + + N YGP PE +++ I + ++G + +YGDG R + YV+D V A Sbjct: 164 NGVRIKIVRIFNTYGPRMNPEDGRVVSNFIVQALKGEDITIYGDGTQTRSFQYVDDMVEA 223 Query: 233 LYLVLKK--GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + ++ +G N G E F + L + ++ + S ++L+ + P Sbjct: 224 MIRMMATDDSFVGP-VNTGNPGE-------FTMLELANLILELTGSKSKLV--FKPLPSD 273 Query: 291 D-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ D S K ++ W P+ + GL +T+ ++ Sbjct: 274 DPKQRKPDISLAKEKLNWEPKIQLREGLTETIAYF 308 >gi|224005937|ref|XP_002291929.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] gi|220972448|gb|EED90780.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] Length = 387 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 39/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS L L+++ +V+V+D N + N FS ++ D+ Sbjct: 61 KILVTGGAGFVGSHLVDRLMSEGH-EVVVLDNFFTGRKANVEHWLHHPN-FSLVRHDV-- 116 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I+ L E D I + A + + I T+ +GT + L Sbjct: 117 ---IQPILLEV--DQIYHLACPASPPHYQYNPVKTIKTSTMGTI----------NMLGLA 161 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGHT 174 K+ + R L ST E+YG D + + Y P + Y K ++ ++ A+ + Sbjct: 162 KRVKARILLASTSEIYG--DPTVHPQPESYWGNVHTIGPRACYDEGKRVAETMMYAYKNQ 219 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 + + ++ N +GP P +++ I + ++ + +YGDG R + YV+D + Sbjct: 220 NNVSIRIARIFNTFGPRMHPNDGRVVSNFIIQSLQNKDITIYGDGAQTRSFQYVDDLING 279 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + L G NIG +E D +I + + S S + + + D P Sbjct: 280 L-VKLMNGSYDSPVNIGNPDEYSIKDFATKIRDMTN-----SKSEIKFLPKVADDPS--- 330 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S K E+GW P+ ++E GL KT+ ++ Sbjct: 331 QREPDISTAKRELGWSPKVSVEEGLKKTIEYF 362 >gi|302557126|ref|ZP_07309468.1| UDP-glucose 4-epimerase [Streptomyces griseoflavus Tu4000] gi|302474744|gb|EFL37837.1| UDP-glucose 4-epimerase [Streptomyces griseoflavus Tu4000] Length = 323 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 91/355 (25%), Positives = 151/355 (42%), Gaps = 60/355 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R + + +V+ +D L+ AG L E ++ Sbjct: 1 MTWLITGGAGYIGAHVARAMTGAGE-RVVALDDLS-AGVPARLPE-----GVPLVRGSSL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E +R E +V+ AA S+ + N+ G LL+ Sbjct: 54 DGELVRRVCAEHGVTGVVHLAARKQAAESVARPTWYYRENVGGLATLLDAV--------A 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + RF+ S+ VYG LD + +ED P P++PY TK + ++LV A G +GI + Sbjct: 106 DAGIE-RFVFSSSAAVYGDLDVDVITEDSPCAPANPYGETKLAGEWLVRAAGRAHGIATV 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE ++P+ R+ ++G DG VRD+++V Sbjct: 165 CLRYFNVAGAA-VPELADTGVFNIVPMVFDRLTRDEAPRIFGDDYPTPDGTCVRDYIHVA 223 Query: 228 D----HVRALYLVLKKGRIGE-RYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D H+ A + + G+ NIG G + R+ I ++ E+ D P Sbjct: 224 DLAEAHLAAARGLSRGDVTGDLTVNIGRGQGVSVRELITVIGEV--TGDTRAP------- 274 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSE-IGWFPQENMESGLNKTVCWYLDNNW-WWR 332 +EDR D A+ SS + +E +GW + ++ +D+ W WR Sbjct: 275 ---LVEDRRPGDAPRAVASSALAAERLGWTARRSVHD--------MIDSAWQGWR 318 >gi|149369387|ref|ZP_01889239.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [unidentified eubacterium SCB49] gi|149356814|gb|EDM45369.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [unidentified eubacterium SCB49] Length = 328 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 33/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TG AGF+GS LC + + +V+ +D L G+L +++ + + F F D+ Sbjct: 4 RVLITGAAGFLGSHLCDKFIAE-GFEVIGMDNLI-TGDLKNIEHLFKLPDFDFYHHDVTK 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L D I++FA+ + + + + +GT LL R+ + Sbjct: 62 FVHVPGKL-----DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLARVKGA----- 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 RF+ ST EVYG + +E+ P Y K + + +A+ +G Sbjct: 112 -----RFMIASTSEVYGDPKEHPQTEEYYGHVNTIGPRGVYDEAKRFQESITMAYHRFHG 166 Query: 177 IPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 I ++ N YGP ++IP I + + G + ++GDG R + YV+D V LY Sbjct: 167 IDTRIARIFNTYGPRMRLNDGRVIPAFIGQALRGEDLTVFGDGMQTRSFCYVDDEVDGLY 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +L NIG +E D EI L Y ++ RP Sbjct: 227 KLLMSDYT-YPVNIGNPDEITIKDFAEEIIKLTGTDQKVIYKPLPKDDPMQRRP------ 279 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D SK K + W PQ + G+ KT ++ Sbjct: 280 --DISKAKEILDWQPQTSRAEGMKKTYQYF 307 >gi|297564307|ref|YP_003683280.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848756|gb|ADH70774.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 327 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 141/325 (43%), Gaps = 31/325 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS LC +L+ QV V+D L+ G L +L + S F F++ D+ Sbjct: 1 MKAVVTGGAGFIGSHLCDHLIARGH-QVTVLDDLS-TGTLANLVQAQGSPGFRFVEGDVL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DRE + S + DA+ + AA V + + N+ GT ++E Sbjct: 59 DRELVDSLVAP--ADAVFHLAAAVGVYNIVDNPLRSLRINLHGTENVVEAA--------- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHT 174 + ++ ST EVYG D E D Y P++ Y+A K + + G Sbjct: 108 -VAHRVPYMVASTSEVYGKNDADGLKEGDDRVYGPATKSRWSYAAAKGLDELVAYVQGVE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+P +++ N GP ++P + + + + +YG G R + V D V A Sbjct: 167 SGVPCVITRFFNVVGPRQTGRYGMVVPRFVDQALADEPITVYGTGTQRRCFGSVFDVVPA 226 Query: 233 LYLVLKKGRI-GERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L ++ + N+GG+ E + D V E+ A+ Y + E Sbjct: 227 LLRLMDTPEAYNQAVNLGGHEEVSIKGLADRVVELAGSRSAITYVDYEEA----YGEGYE 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENM 313 RRY D+S IG+ P+ ++ Sbjct: 283 DMQRRYP-DTSLAARLIGYRPERDL 306 >gi|255008342|ref|ZP_05280468.1| DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 3_1_12] gi|313146065|ref|ZP_07808258.1| NAD-dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] gi|313134832|gb|EFR52192.1| NAD-dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] Length = 337 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR ++ GG GFIGS L ++ + ++ V+D G+ + + + F F D Sbjct: 1 MRYLINGGCGFIGSNLAAEVLRRGE-ELFVLDNFYRFGSDANFQWLRSKGDFKFYPADTR 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + +KE +PD I + A + + SI TN +G F +L+ R + Sbjct: 60 NTNDVETIIKEVKPDYIFHLAGQVAMTTSISNPRLDFETNALGMFNVLDAVRKY------ 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSED----------------MPYNPSSPYSATKASS 164 L ST++VYG + F E+ + + SPY +K ++ Sbjct: 114 --SPNSVILFSSTNKVYGDFENFHFREEEKRYVCEEYPLGFPESIILDFHSPYGCSKGAA 171 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYH-----------FPEKLIPLAITRMIEGSHVFL 213 D +L + YG+ ++ S+ YG F +K L I + I + Sbjct: 172 DQYMLDFNRIYGLKTIVFRHSSMYGSNQHATYDQGWIGWFCQK--ALEIKKGILQESFTI 229 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLK--KGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 G+G+ VRD L+ +D V LY K + G+ +NIGG E N + E+ +L+ + Sbjct: 230 SGNGKQVRDVLHGQDVVN-LYFKSKDVEAAYGQAFNIGGGVE--NSLSLLELFEILEQKL 286 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 ++ E I+ R + + D K I W P+ + E GL++ + W Sbjct: 287 DIKMNYRE----IDWRESDQKVFIADIKKAVDIIDWTPEVSKEVGLDRMLNW 334 >gi|237714673|ref|ZP_04545154.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D1] gi|262406540|ref|ZP_06083089.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|294645689|ref|ZP_06723376.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294806958|ref|ZP_06765781.1| GDP-mannose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|229445442|gb|EEO51233.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D1] gi|262355243|gb|EEZ04334.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_22] gi|292638968|gb|EFF57299.1| GDP-mannose 4,6-dehydratase [Bacteroides ovatus SD CC 2a] gi|294445845|gb|EFG14489.1| GDP-mannose 4,6-dehydratase [Bacteroides xylanisolvens SD CC 1b] gi|295084068|emb|CBK65591.1| GDP-mannose 4,6-dehydratase [Bacteroides xylanisolvens XB1A] Length = 361 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ + L + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 53 VRDMKKDRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTADADAI 112 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 113 GTLRMLEAVRI----LGMEKKT--KIYQASTSELFGMVQEVPQKETTPFYPRSPYGVAKQ 166 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 167 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGLQDKLYLGNL 225 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 ++RDW Y +D+V ++L+L+ Sbjct: 226 DSLRDWGYAKDYVECMWLILQ 246 >gi|20977182|gb|AAM33311.1|AF503594_2 Gmd [Erwinia chrysanthemi] Length = 372 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 54/306 (17%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + E QPD I N A+SHV S + + IGT LLE R Sbjct: 64 DLTDTSNLTRIIAEVQPDEIYNLGAQSHVAVSFESPEYTADVDAIGTVRLLESIRFLGLA 123 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 124 ------NKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGM 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I ++ + +G +Y G+ ++RDW + D+V+ Sbjct: 178 YACNGILFNHESPRRGETFVTRKITRGLSNIAQGLEKCIYMGNLDSLRDWGHARDYVKMQ 237 Query: 234 YLVLKKGR-------IGERYNI-------------------GGNNERKNIDIV------- 260 +++L++ + G +Y++ G NE+ + + Sbjct: 238 WMMLQQEKPEDFVIATGVQYSVRDFIRMSAAKLGIELEFTGTGVNEKAVVSKITGNNAPA 297 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 ++G ++ A+ P+ + RP D SK K+ +GW P+ +E +++ Sbjct: 298 LKVGDVIVAVDPRYF-----------RPAEVDTLLGDPSKAKNVLGWVPETTLEEMIDEM 346 Query: 321 VCWYLD 326 V + L+ Sbjct: 347 VAYDLE 352 >gi|307278669|ref|ZP_07559738.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] gi|306504653|gb|EFM73854.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] Length = 320 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + Y + Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGSESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|304385459|ref|ZP_07367804.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] gi|304328666|gb|EFL95887.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] Length = 335 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/332 (26%), Positives = 141/332 (42%), Gaps = 49/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + + L+ + +V+V+D L+ G+ ++ E ++ F + DI Sbjct: 6 MSILVVGGAGYIGSHMVKRLIEQGQ-EVVVVDNLS-TGHRKAVDEKAR-----FYEGDIR 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ D +V+FAA S V S+ ++ N G LLEE R Sbjct: 59 NHVFLKGVFDRENIDTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMR-------- 110 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D R + ST YG +K E+ P +PY +K + ++ YGI + Sbjct: 111 -DHDVKRIIFSSTAATYGVPEKSPIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFV 169 Query: 181 LSNCSNNYGPY--------HFPEKLIPLAITRMIEGS--HVFLYG------DGQNVRDWL 224 N G Y H PE + I ++ G + ++G DG NVRD++ Sbjct: 170 ALRYFNVAGAYPDGSIGEDHGPETHLTPIILQVSAGQRDQLKIFGDDYNTPDGTNVRDYV 229 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-EL 280 +V D V A L LK G + +N+G + GF + ++ + T E Sbjct: 230 HVLDLVDAHILAINYLKAGNDSDVFNLGSST-----------GFSVKQMVEAAREVTGEP 278 Query: 281 I--RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I E RPG S K + + W PQ Sbjct: 279 IPAEIAERRPGDPDSLIAASQKARDVLQWQPQ 310 >gi|226942811|ref|YP_002797884.1| NAD-dependent epimerase/dehydratase [Azotobacter vinelandii DJ] gi|226717738|gb|ACO76909.1| NAD-dependent epimerase/dehydratase [Azotobacter vinelandii DJ] Length = 312 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 31/324 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 + ++VTGGAGFIGS L L+ V V+D L+ +G ++L + S L ++ ++ Sbjct: 4 LPVLVTGGAGFIGSHLVDALLAR-GYSVRVLDNLS-SGKPDNLP-LGHSRL-ELIEGNVA 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R + A+V+ AA + V S++ +N IGT + E R Sbjct: 60 DAVRVREVMAGC--GAVVHLAAVASVQASVIDPVGTHRSNFIGTLNVCEAMR-------- 109 Query: 121 DKKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 ++ R L S+ VYG+ +G + ED P P +PY+A K +S++ + + +G+ Sbjct: 110 -EQGLRRVLFASSAAVYGNNGEGEVIDEDTPKAPLTPYAADKLASEHYLDFYRRQHGLEP 168 Query: 180 LLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP P +I + R +G + L+GDG+ RD++Y+ D + L Sbjct: 169 AIFRFFNIYGPRQDPSSPYSGVISIFTERAAKGLPITLFGDGEQTRDFVYIADLIGILLQ 228 Query: 236 VLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L+ +I N+G N ++ EI L L P+ +R RPG D R+ Sbjct: 229 ALEAPQILPGAVNVGLNRSLSLNRLLEEISALFGGL-PE-------VRREAARPG-DIRH 279 Query: 295 AIDSSKIKSEIGWFPQEN-MESGL 317 + S + E P+ M +GL Sbjct: 280 SQASDRRLRERYRLPEPTPMAAGL 303 >gi|326798470|ref|YP_004316289.1| UDP-glucuronate decarboxylase [Sphingobacterium sp. 21] gi|326549234|gb|ADZ77619.1| UDP-glucuronate decarboxylase [Sphingobacterium sp. 21] Length = 327 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TG AGF+GS LC R++ D V+ +D L G+L +++ + + F F D+ Sbjct: 5 RILITGAAGFLGSHLCDRFIKEDF--HVIGMDNLI-TGDLRNIEHLFKLENFEFYNHDVS 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L D I++FA+ + + + + +GT LL R Sbjct: 62 KFVYVPGRL-----DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 Q R L ST EVYG E+ P P Y K + + +A+ + Sbjct: 109 --SKQSRILVASTSEVYGDPTVSPQPEEYWGNVNPVGPRGVYDEAKRFQEAITMAYHTFH 166 Query: 176 GIPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP +++P I + + G + ++GDG R + YV+D + + Sbjct: 167 GLDTRIVRIFNTYGPRMRLNDGRVLPAFIGQALRGEDLTVFGDGSQTRSFCYVDDQIDGI 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 Y +L + NIG +E I + +I + ++ +L+ D P D + Sbjct: 227 YRLLMSDYT-QPVNIGNPDE-------ITIKQFGEEIIRLTGTNQKLV--YRDLPIDDPK 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D +K K +GW P+ E GL KT ++ Sbjct: 277 QRRPDITKAKEILGWEPKIGREEGLQKTYRYF 308 >gi|260798556|ref|XP_002594266.1| hypothetical protein BRAFLDRAFT_275563 [Branchiostoma floridae] gi|229279499|gb|EEN50277.1| hypothetical protein BRAFLDRAFT_275563 [Branchiostoma floridae] Length = 373 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/342 (23%), Positives = 153/342 (44%), Gaps = 32/342 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY--AGNLNSLKEISQSNL----FSFLQV 57 ++TG +G GS L +L+N + +I + + G + L + ++ F Sbjct: 27 LITGVSGQDGSYLAEFLINKGYVVHGIIRRASTFNTGRVEHLYKNPMAHFEGDNFHLHYG 86 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D C+ + E QPD I N AA+SHV S A+ + +G +L+ R Sbjct: 87 DMTDSTCLVKIISEVQPDEIYNLAAQSHVKVSFDLAEYTADVDGVGVLRMLDAIR----- 141 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + +F Q ST E++G + + E P+ P SPY K + ++V+ + Y I Sbjct: 142 -TTGLASKVKFYQASTSEMFGLVQEVPQKETTPFYPRSPYGTAKLYAYWVVVNYREAYNI 200 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHV-FLYGDGQNVRDWLYVEDHVRA 232 +L ++ S G F + I + +++ G + G+ + RDW + +D+VRA Sbjct: 201 FACNGILFNHESPRRGET-FVTRKITRGVAKILLGQQEDIVLGNLDSQRDWGHAKDYVRA 259 Query: 233 LYLVLK----------KGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++++++ G + R + + + +DI++E G L+ + + T + Sbjct: 260 MWMIMQHEVPDDFVVATGTVHSVREFVVASFKHIGVDIMWE-GKGLEEVGKDKTTGTVRV 318 Query: 282 RFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R + RP DS+K K +GW P + E + + V Sbjct: 319 RVAKKYYRPTEVDFLQGDSTKAKKILGWEPSVSFEEMVKEMV 360 >gi|319788434|ref|YP_004147909.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis 11-1] gi|317466946|gb|ADV28678.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis 11-1] Length = 322 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 30/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTG AGFIG+ C+ L + V+ +D Y + + + +D Sbjct: 1 MTVLVTGAAGFIGAYTCQALAARGE-HVIGLDNYNDYYDPAIKRDRVAALCPQVDIRALD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + DR+ + + E +P +V+ AA++ V S+ ++ +N+ G +LE R Sbjct: 60 LADRDGLAALFAEVRPVRVVHLAAQAGVRYSLQNPHAYVASNLEGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + S+ VYG FSE+ + P S Y+ATKA+++ + ++ YG+ Sbjct: 114 ---HGGVGHLVYASSSSVYGDSATPPFSEEQRIDRPRSLYAATKAANELMAYSYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ G+ RD+ +V D V + Sbjct: 171 RATGLRFFTVYGPWGRPD-MAPLLFSRAVLAGRPIEVFNQGRMRRDFTHVSDIVAGILGA 229 Query: 237 LKKG-----RIGERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTELIRFIEDRPGH 290 L + + E +N+G + +++ IG + A +P + + +PG Sbjct: 230 LDRPAGNDLALHEVFNLGNHTP---VELERFIGVIEQAAGVPARKVYKPM------QPGD 280 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D+ + G+ P+ +E+GL V W Sbjct: 281 MIETMADTRRAAEAFGYEPRTPIEAGLPPVVHW 313 >gi|301164387|emb|CBW23945.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 638R] Length = 373 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 156/341 (45%), Gaps = 35/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF GS L +L ++L +V+ + + + N + + + L+ DI D Sbjct: 28 RVLVTGHTGFKGSWLSIWL-HELGAEVIGVAQDPFTARDNFVLSGIGEKIKADLRADIRD 86 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I++ +E+QP+ + + AA+ V S E TN++GT +LE R Sbjct: 87 GERIKAIFQEYQPEIVFHLAAQPLVRLSYDIPVETYETNVMGTIHVLEAVR--------- 137 Query: 122 KKDQFRF-LQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 D + + I+TD+ Y + ++ + E+ P PYS++K +++ + +W ++ Sbjct: 138 STDSVKVGVMITTDKCYENKEQIWGYRENEPMGGYDPYSSSKGAAEIAIASWRRSFFHPE 197 Query: 176 -----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G + N G + +++IP I + G+ + + + +R W +V + Sbjct: 198 QYDKHGKSIASVRAGNVIGGGDWALDRIIPDCIKALESGAAIDIRSP-KAIRPWQHVLEP 256 Query: 230 VRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L+ +K R E +N G E +I V+++ + +Y EL Sbjct: 257 LSGYMLLAQKMWSDPTRYCEGWNFGPRAE--SISTVWDVA----TEVVNNYGSGELRDLS 310 Query: 285 EDRPGHDRR-YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + H+ + +D SK K +GW P+ N+E + TV WY Sbjct: 311 DPHALHEAKLLMLDISKAKFRLGWEPKMNIEQTVELTVDWY 351 >gi|242094990|ref|XP_002437985.1| hypothetical protein SORBIDRAFT_10g005920 [Sorghum bicolor] gi|241916208|gb|EER89352.1| hypothetical protein SORBIDRAFT_10g005920 [Sorghum bicolor] Length = 440 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 40/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFS-- 53 + ++VTG AGF+G+ C + V+ ID N N SLK+ ++ L S Sbjct: 97 LSVLVTGAAGFVGTH-CSLALRKRGDGVVGID------NFNNYYDPSLKKARRALLGSHG 149 Query: 54 --FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 ++ DI D + +++ AA++ V ++ ++ +NI G LLE Sbjct: 150 VFVVEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVSLLE-- 207 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLA 170 +C +D Q + S+ VYG D+ FSE + P+S Y+ATK + + + Sbjct: 208 ----AC--KDADPQPAVVWASSSSVYGLNDRVPFSEAHRTDRPASLYAATKKAGEEITHT 261 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNV---RDWLYV 226 + H YG+ V YGP+ P+ + + TR +++G + +Y +V RD+ Y+ Sbjct: 262 YNHIYGLSVTGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVYRGRDHVALARDFTYI 320 Query: 227 EDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP------KSYSHTEL 280 +D VR L G GG +F +G +P + Y + Sbjct: 321 DDIVRGCLASLDTA--GRSTGTGGKKRGPAQYRIFNLGNTSPVTVPTLVAILERYLRVKA 378 Query: 281 IRFIEDRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + + + PG+ D Y + S + E+G+ P ++E GL K V WYL Sbjct: 379 KKNVVEMPGNGDVPYTHANISLAREELGYKPTTSLEMGLKKFVRWYLS 426 >gi|255692074|ref|ZP_05415749.1| GDP-mannose 4,6-dehydratase [Bacteroides finegoldii DSM 17565] gi|260622225|gb|EEX45096.1| GDP-mannose 4,6-dehydratase [Bacteroides finegoldii DSM 17565] Length = 356 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + + Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 RDW Y +D+V ++L+L+ Sbjct: 225 DARRDWGYAKDYVECMWLILQ 245 >gi|168481411|gb|ACA24892.1| Gmd [Escherichia coli] Length = 372 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + +TG G GS L +L+ D +V I + + N + I Q N FL Sbjct: 3 KAFITGITGQDGSYLAEFLL-DKGYEVHGIKRRASSFNTERVDHIYQDRHNQNPNFFLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +KE QPD + N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLVRLIKEIQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 C + K RF Q ST E++G + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 CGLEKKT---RFYQASTSELFGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I AI + +G LY G+ + RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANISQGIEKCLYLGNMDSPRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|85712154|ref|ZP_01043206.1| Nucleoside-diphosphate-sugar epimerase [Idiomarina baltica OS145] gi|85693962|gb|EAQ31908.1| Nucleoside-diphosphate-sugar epimerase [Idiomarina baltica OS145] Length = 350 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/369 (23%), Positives = 157/369 (42%), Gaps = 70/369 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----------SLKEISQS 49 M+++VTG AGFIG L+ D+ +V+ +D + ++N + EI + Sbjct: 1 MKVLVTGTAGFIGHFTALRLI-DMGHEVVGLDSINDYYDINLKYGRLREAGFDVAEIKRQ 59 Query: 50 NL--------FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI 101 L + F Q + + + ++S + DA+ N AA++ V S+ ++ +NI Sbjct: 60 RLIRSKKHPKYQFCQAKLEEGDYLKSLFESENFDAVCNLAAQAGVRHSLEKPQAYVESNI 119 Query: 102 IGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPS 154 +G +LE +C K+ S+ VYG +E MP+ +P Sbjct: 120 VGFVNILE------ACRDSGVKN---LSYASSSSVYG------LNESMPFCTSDSVNHPV 164 Query: 155 SPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFL 213 S Y+A+K S++ L + H +GI YGP+ P+ + P T+ + + Sbjct: 165 SLYAASKKSNELLAHTYAHLFGISCTGLRFFTVYGPWGRPD-MAPYIFTKAAFNEETIKV 223 Query: 214 YGDGQNVRDWLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERK 255 + G+ RD+ Y++D V + V++ ++ YNIG N + Sbjct: 224 FNHGKMKRDFTYIDDIVDGVVRVIENPCKADKSWDPQSPTASTSSAPYKIYNIGNNEPVE 283 Query: 256 NIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 +D + + + I K Y+ + PG D S + + +G+ P +++ Sbjct: 284 LLDFINAVESAVGKKIRKEYTPMQ--------PGDVVATYADVSDMITCLGYKPSTSVKD 335 Query: 316 GLNKTVCWY 324 G+ KTV WY Sbjct: 336 GMVKTVEWY 344 >gi|291567581|dbj|BAI89853.1| UDP-glucose 4-epimerase [Arthrospira platensis NIES-39] Length = 332 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 57/337 (16%) Query: 1 MRLIVTGGAGFIGS----ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQ 56 + ++VTGGAG+IGS AL R N + V+D L Y G+ ++ + + L ++ Sbjct: 6 LNVLVTGGAGYIGSHGVLALQRAGYNPI-----VLDNLVY-GHQELVENVLKVEL---IE 56 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D DR + + DA+++FAA ++V S+ +++ N++GT LL + Sbjct: 57 GDTNDRLLLDQLFSSRKIDAVMHFAAYAYVGESVTNPEKYYRNNVVGTLTLL-------A 109 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ D+F F ST YG E+ P NP SPY A+K + ++ + Y Sbjct: 110 AMNSAGIDKFVF--SSTCATYGVPQIIPIPENHPQNPISPYGASKLMVERILADFDAAYN 167 Query: 177 IPVLL--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNV 220 + + ++ + G H PE LIPL + T + + H+ ++G DG + Sbjct: 168 LRSVSFRYFNAAGADPNGLLGEDHDPETHLIPLTLFTALGKRDHISIFGTDYPTPDGTCI 227 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D HV L + G+ E +N+G GF + +I + Sbjct: 228 RDYIHVSDLADAHVLGLQHLFSGGKT-EFFNLGNGK-----------GFSVKEVIESARE 275 Query: 277 HT-ELIRFIE--DRPGHDRRYAIDSSKIKSEIGWFPQ 310 T I+ +E RPG S K + +GW PQ Sbjct: 276 ITGREIKTVECDRRPGDPPSLVGTSEKAQQILGWNPQ 312 >gi|297526531|ref|YP_003668555.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255447|gb|ADI31656.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 319 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 15/250 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS L L+ V V+D L+ N I + N F FL+ D+ + Sbjct: 4 RILVTGGAGFIGSHLVDELLRR-GYYVRVLDNLSSGSLKNIQHHIGEKN-FDFLRGDLKN 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + I ++LK+ D + + AA V S + NI+ TF LLE R Sbjct: 62 MDIINNSLKDI--DTVFHLAANPEVRLSTTDPEIHFRENIVATFNLLEAIRRSGGV---- 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + F ST VYG E P S Y A+KA+ + L+ ++ H YG L Sbjct: 116 --EVLVFASSST--VYGDPQIIPTPETHEIRPISVYGASKAACESLICSYAHLYGFKALS 171 Query: 182 SNCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRA-LYLVLKK 239 +N GP +I I ++ + + + GDG + +LYV+D V A L++ + Sbjct: 172 LRYANIVGP-RLNHGVIYDFILKLKKNPEILEVLGDGTQKKSYLYVKDAVDATLHVYDRI 230 Query: 240 GRIGERYNIG 249 + + YNIG Sbjct: 231 SKTYDVYNIG 240 >gi|156740225|ref|YP_001430354.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156231553|gb|ABU56336.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 334 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 34/342 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGG GFIGS L LV +L QV ++D L Y GN ++ I ++V+I Sbjct: 15 RVLITGGMGFIGSNLAHRLV-ELDAQVTLVDSLIPIYGGNQRNIAGIEHR-----VRVNI 68 Query: 60 CD--RECIRSALKEFQPDAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D E + L + Q D + N A + SH+D S+ + N +LE R Sbjct: 69 ADVRDEYSMNYLVQGQ-DYLFNLAGQTSHLD-SMTDPYTDLEINCRAQLSILEACR---- 122 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + ST ++YG D E +P K + ++ + + + Y Sbjct: 123 ----KHNPNLKLVYASTRQIYGKPDYLPVDERHLLHPVDVNGVNKMAGEWYHILYNNVYS 178 Query: 177 IPVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 I +N YGP + + + I R+I+ + ++GDG +RD+ YV+D V A Sbjct: 179 IRACALRLTNTYGPRMRVKDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEA 238 Query: 233 LYLV-LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + L G +N+G + + I++ L++ S+ E++ F DR D Sbjct: 239 MLLAGASPAADGGIFNLGSD---ETINLRDLAALLVEINGGGSF---EIVPFPPDRKVID 292 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY-LDNNWWW 331 Y D I+ +GW P+ ++ GL +T+ +Y + ++W Sbjct: 293 IGDYYADYRMIQGRLGWRPKVSLREGLRRTLEFYRREREYYW 334 >gi|99079857|ref|YP_612011.1| UDP-galactose 4-epimerase [Ruegeria sp. TM1040] gi|99036137|gb|ABF62749.1| UDP-galactose 4-epimerase [Ruegeria sp. TM1040] Length = 327 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 59/353 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L V + +T G +++K F Q D+ DR Sbjct: 4 VLVTGGAGYIGSHACKALKQAGYTPVTYDNLVT--GWQDAVK------FGPFEQGDLTDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++P A+++FAA S V ++ + N+ G+ L+E + CL Sbjct: 56 GRLDEVFAQYKPVAVMHFAALSQVGEAMSEPGRYWANNVGGSLCLIEAA-VAAGCLD--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 F+ ST YG D + E+ P P + Y A+K + + ++ + +G+ ++ Sbjct: 112 -----FVFSSTCATYGEHDNVVLDENTPQQPLNAYGASKRAVEDILKDFEAAHGLRSVIF 166 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL--YG------DGQNVRDWLY 225 ++ G +H PE L+PL I + I+G L +G DG +RD+++ Sbjct: 167 RYFNVAGADPEAEVGEFHQPETHLVPLMI-QAIKGERAALTVFGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY--SHTEL 280 V D V A L LK G+ +N+G GF + ++ S+ ++TE+ Sbjct: 226 VCDLVDAHILGLKWLEDGKGSRVFNLGTGT-----------GFSVKEVLSHSHAVTNTEV 274 Query: 281 IRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 I R D + S + E+GW P+ + T+ + + W W Sbjct: 275 PHVIGPRRAGDCTKLVSGSVRAGEELGWEPKRS-------TMDQMISDAWRWH 320 >gi|163737928|ref|ZP_02145344.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis BS107] gi|161388544|gb|EDQ12897.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis BS107] Length = 346 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 47/344 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++VTGGAG+IGS C+ L + +TY + ++ + F + D+ D Sbjct: 22 HILVTGGAGYIGSHACKAL------RAAGFTPVTYDNLVTGWQDAVK--FGPFEKGDLSD 73 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 R + ++QP A+++FAA S V ++ + N+ G+ L+E + Sbjct: 74 RARLDEVFAKYQPAAVMHFAALSQVGEAMSEPGRYWANNVGGSLTLIE---------AAV 124 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D F+ ST YG D + E P P + Y A+K + + ++ +G ++G+ ++ Sbjct: 125 AADCLDFVFSSTCATYGEHDNVVLDESTPQVPLNAYGASKRAVEDILRDFGASHGLRSVI 184 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSH--VFLYG------DGQNVRDWL 224 ++ G +H PE L+PL + I+G + ++G DG VRD++ Sbjct: 185 FRYFNVAGADPEAEVGEFHRPETHLVPL-VLDAIDGKRDALTIFGTDYDTPDGTCVRDYV 243 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D V A L LK G+ + +N+G V E+ +A KS H+ Sbjct: 244 HVCDLVDAHVLGLKWLKDGKGSQVFNLGTGTGFS----VREVMDKAEATTGKSVPHSIGP 299 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWY 324 R R G + S + + +GW P + ++E+ + W+ Sbjct: 300 R----RAGDCTKLVSGSVRAATLLGWEPTRSDLETMIADAWGWH 339 >gi|254819575|ref|ZP_05224576.1| NAD dependent epimerase/dehydratase family protein [Mycobacterium intracellulare ATCC 13950] Length = 368 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/383 (22%), Positives = 162/383 (42%), Gaps = 67/383 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 +++TGGAGFIGSAL R L+ + V V+D L G ++ + LF+ D+ Sbjct: 1 MLITGGAGFIGSALARRLI-EAGYDVAVMDVLHPQVHGGDRPIELPPSARLFTG---DVT 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L+ +P +++ AAE+ +S+ A + N++GT LL+ LS+ Sbjct: 57 HAPDFDAVLRLSRPSQVIHLAAETGTAQSLSEATRHGSVNVVGTTQLLD-------ALSR 109 Query: 121 DKKDQFRFLQISTDEVYG-------------------SLDKGLFSEDMPYN--------- 152 + + S+ VYG L G + P Sbjct: 110 SGHVPDQLVLASSRAVYGEGSWQSGSHIFYPPPRSHAQLVAGRWDPQGPAGEQAVPLPSR 169 Query: 153 -------PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLA 201 P++ Y+ATK + ++L+ AW + + + N YGP ++ L Sbjct: 170 ADRTEPRPTNVYAATKLAQEHLLAAWTSAHDTNLSVLRLQNVYGPGQSLTNSYTGIVALF 229 Query: 202 ITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIV 260 +G + +Y DG+ VRD++Y++ V AL+ +++ R +IG ++ Sbjct: 230 ARLARQGLALEVYEDGRIVRDFVYIDAVVDALFAAVQRPATQPRCLDIGSGQATTIHELA 289 Query: 261 FEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT 320 +I + A P T + +F R G R + D+ +E+GW P+ +++ GL Sbjct: 290 NKIAAMCGAPEP-----TVVPKF---RDGDVRAASCDTEPAINELGWRPERSLDDGLRAL 341 Query: 321 VCWYLD------NNWWWRPLYKE 337 + W + +N RP+ ++ Sbjct: 342 LDWIAERPEAAGSNESGRPIVEQ 364 >gi|194444571|ref|YP_002041379.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403234|gb|ACF63456.1| GDP-mannose 4,6-dehydratase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 373 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G G+ L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGAYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDASNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|269126844|ref|YP_003300214.1| GDP-mannose 4,6-dehydratase [Thermomonospora curvata DSM 43183] gi|268311802|gb|ACY98176.1| GDP-mannose 4,6-dehydratase [Thermomonospora curvata DSM 43183] Length = 344 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 13/264 (4%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D+ + SA++ QPD + N A S+V S A+ +G +LE R+ S Sbjct: 57 DLLDQGSLISAVERVQPDEVYNLGAISYVPMSWQQAELTAEVTGMGVLRMLEAIRVV-SG 115 Query: 118 LSQDK---KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++Q + Q RF Q S+ E++G + + +E P++P SPY K Y+ + + Sbjct: 116 VTQSRTPGSGQIRFYQASSSEMFGMVRETPQNEKTPFHPRSPYGVAKTYGHYITQNYRES 175 Query: 175 YGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHV 230 YG+ + N+ P F + + L + R+ G + G+ + RDW + D+ Sbjct: 176 YGMFAVSGILFNHESPRRGAEFVTRKVSLGVARIKLGLAKELRMGNLEARRDWGFAGDYA 235 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 RA+++++ + + E + IG + D+V E+ F L + Y + R+ RP Sbjct: 236 RAMHMMMSQDKP-EDFVIGTGRTQSVRDLV-ELAFSSVGLNWRDYVVLD-PRYT--RPAE 290 Query: 291 DRRYAIDSSKIKSEIGWFPQENME 314 D K + ++GW P+ E Sbjct: 291 VDLLCADPKKAREQLGWEPRVGFE 314 >gi|271962806|ref|YP_003337002.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] gi|270505981|gb|ACZ84259.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] Length = 321 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 56/335 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG+IGS + LV + QV V+D L+ G+ +++ ++ F++ + Sbjct: 1 MKLLVTGGAGYIGSVVAAQLV-EAGHQVTVLDDLS-TGHADAVPAGAR-----FVEGSVT 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D +++FAA+S V S+ + N+ GT LL+ R Sbjct: 54 EAADVLPGM-----DGVLHFAAKSLVGESVERPGLYWAHNLGGTLSLLDAMR-------- 100 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + ST YG ++ E P P++PY A+K + D + + YG+ + Sbjct: 101 -TAGVGRIVFSSTAATYGEPERSPVVETDPTRPTNPYGASKLAVDTALTTFAGMYGLAAV 159 Query: 181 LSNCSNNYGPY-----------HFPEK-LIPLAITRMIEGSH-VFLYG------DGQNVR 221 N G + H E LIP + + G V ++G DG VR Sbjct: 160 SLRYFNVGGAHTGGDGRVYRERHTVETHLIPNLLAVALGGRESVSMFGTDYPTPDGTCVR 219 Query: 222 DWLYVEDHVRALYLVLKKGRIGER--YNIG---GNNERKNIDIVFEIGFLLDALIPKSYS 276 D+++V D RA L L+ GE YN+G G + R+ + + E+ + Sbjct: 220 DYIHVGDLARAHLLALEACSPGEHKIYNLGNGTGFSVREVLAVCREV---------TGHE 270 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 ++R E R G S KI+ E+GW P+ Sbjct: 271 IPAVVR--ERRAGDPAVLVASSEKIQRELGWKPEH 303 >gi|167629032|ref|YP_001679531.1| udp-glucose 4-epimerase [Heliobacterium modesticaldum Ice1] gi|167591772|gb|ABZ83520.1| udp-glucose 4-epimerase [Heliobacterium modesticaldum Ice1] Length = 323 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAG+IGS + +V+++D LT G+L+ + F + D+ Sbjct: 1 MKYLVTGGAGYIGSH-TALALLAAGAEVVILDNLT-TGHLSLVPR-----GVPFYRGDVG 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D ++ + + D +++FAA+S V S++ + N T LL+ + Sbjct: 54 DAGLLQEIFHQHRIDGVLHFAAKSLVGESMVAPGHYFLANTGQTTALLQ---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + RF+ ST VYG D+ ED P P++PY +K + ++ + +G+ Sbjct: 105 AEAGVRRFVFSSTAAVYGEPDQVPIPEDHPVRPTNPYGLSKHLIEAMLPWFARVHGLKWI 164 Query: 179 ------VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVF--LYG------DGQNVRDWL 224 V ++ G H PE + + ++ +G + L+G DG +RD++ Sbjct: 165 ALRYFNVAGADPEGRSGEQHDPETHLIPNVLQVAQGKREYLSLFGDDYATPDGTCIRDYI 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS---YSH 277 +V D HV AL L G YN+G +GF + ++ ++ H Sbjct: 225 HVSDLADAHVLALQ-ALAAGHPSGFYNLGNG-----------LGFSVLQVVERARQVTGH 272 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 +R RPG +++ +E+GW P+ Sbjct: 273 PIPLRIEPRRPGDPAVLVASNARAMAELGWRPR 305 >gi|323705072|ref|ZP_08116648.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535498|gb|EGB25273.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] Length = 329 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 150/352 (42%), Gaps = 47/352 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L + V+V+D L K + L+ DI Sbjct: 1 MSILVCGGAGYIGSHTAYELFKRGE-DVIVVDSLITGHE----KAVIGGKLYVG---DIR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +E +A+++FAA S V S+ ++ N+ GT LL++ + Sbjct: 53 DSEFMDKVFEENDIEAVIDFAAFSLVGESVGKPLDYYENNVYGTMCLLKKMVKYGV---- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 KK F ST YG ++ ED P++PY TK + + ++ + YGI Sbjct: 109 -KKIVFS----STAATYGEPERVPIKEDDKTFPTNPYGETKLAVEKMLKWCDNAYGIKHV 163 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVF--LYG------DGQNVRDW 223 V ++ S G H PE LIPL I ++ G F +YG DG VRD+ Sbjct: 164 VLRYFNVAGADESGVIGEDHNPETHLIPL-ILQVPLGKRDFVEIYGDDYDTKDGTCVRDY 222 Query: 224 LYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D A L L K R YN+ GN E + V E K H Sbjct: 223 IHVTDLADAHILALDKLRRDSSSAIYNL-GNGEGFTVKEVVETA-------RKVTGHPIP 274 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN-MESGLNKTVCWYLDNNWWW 331 + RPG + S KI +E+GW P+ N +E + W+ N + + Sbjct: 275 AKIAARRPGDPAKLVASSDKIINELGWNPKHNSLEEIIESAWKWHKSNPYGF 326 >gi|255575062|ref|XP_002528436.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223532112|gb|EEF33919.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] Length = 346 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V+D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + ++ Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLVHPQEESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRNEPLTVQAPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E +++ + L++ + I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMLELAETVKELINPDVE--------IAKVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + GL Sbjct: 304 RQRKPDITKAKELLGWEPKIKLRDGL 329 >gi|159900836|ref|YP_001547083.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893875|gb|ABX06955.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 510 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/344 (25%), Positives = 155/344 (45%), Gaps = 33/344 (9%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++V GGAG+IGS + R L+N V ++D L Y +++E+ F F+ D+ Sbjct: 167 VLVIGGAGYIGSLVLRRLLNQ-GYHVRLVDSLMYGD--GAIRELYNHPQFEFVHGDMRHI 223 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 E + +L DA+++ A + AD N+I T +L E +C Sbjct: 224 ETVVRSLVGM--DAVIHLGAIVGDPACAIDADFSTEINLIATRMLAE------ACKGYGI 275 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + RF+ ST VYG+ D+ L E NP S Y+ TK S+ ++L P +L Sbjct: 276 R---RFIFASTCSVYGASDE-LLDERSALNPVSLYAQTKIDSENILLGLADQQFAPTIL- 330 Query: 183 NCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-- 238 S YG P + ++ L + + + ++G G R +++ +D RA+ + L Sbjct: 331 RFSTIYGLSPRPRFDLVVNLLTAKAVREGKITVFG-GDQWRPFVHADDAARAVVMSLNAP 389 Query: 239 -KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 GE +N+G +++ I IG L+ LIP++ EL+ ++ R Y + Sbjct: 390 LAAVRGEIFNVGSDSQNYTIS---AIGELIGRLIPEA----ELV--LQGNDVDKRNYRVS 440 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNW--WWRPLYKELK 339 +KI + + P+ +E G+ + D + ++ P Y K Sbjct: 441 FAKIAKVLNFSPEHTVEDGVREIEAALRDGSIGDYYDPAYNNHK 484 >gi|297819814|ref|XP_002877790.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyrata subsp. lyrata] gi|297323628|gb|EFH54049.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyrata subsp. lyrata] Length = 376 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 23/323 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG G GS L +L+ +V + + + N L I L Sbjct: 35 LITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRLNHIYIDPHNVNKALMKLHYA 93 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D +R L +PD + N AA+SHV S D G LLE R Sbjct: 94 DLTDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR----S 149 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + D ++ Q + E++GS SE P++P SPY+A+K ++ + + + YG+ Sbjct: 150 HTIDSGRTVKYYQAGSSEMFGSTPPPQ-SETTPFHPRSPYAASKCAAHWYTVNYREAYGL 208 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I A+ R+ G L+ G+ Q RDW + D+V A Sbjct: 209 FACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA 267 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++L+L++ + + + E ++ ++ F L K++ + F RP Sbjct: 268 MWLMLQQEKPDDY--VVATEEAHTVEEFLDVSFGYLGLDWKNHVEIDPRYF---RPSEVD 322 Query: 293 RYAIDSSKIKSEIGWFPQENMES 315 D+SK K +GW P+ E+ Sbjct: 323 NLQGDASKAKEVLGWKPKVGFET 345 >gi|256059258|ref|ZP_05449463.1| NAD-dependent epimerase/dehydratase family protein [Brucella neotomae 5K33] Length = 294 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 40/308 (12%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D + G + +++ + + FSF++ DI + +R D I N A + Sbjct: 1 MICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNTLDLRV-------DEIYNLACPASPP 52 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 + TN+IG+ LLE + + R Q ST EVYG E Sbjct: 53 HYQADPVHTMKTNVIGSLNLLELAAHYKA----------RIFQASTSEVYGDPHVHPQPE 102 Query: 148 DM-----PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPL 200 + + P S Y K S++ L + YG+ + + N YGP P+ +++ Sbjct: 103 NYWGNVNSFGPRSCYDEGKRSAEMLFHDFHQQYGVDIRIVRIFNTYGPRMRPDDGRVVSN 162 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LVLKKGRIGERYNIGGNNERKNIDI 259 I + ++G + +YGDG R + YV+D + + L+ I NIG E Sbjct: 163 FIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPVNIGNPGE------ 216 Query: 260 VFEIGFLLDALIPKSYSHTELIRF---IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 F +G L + +I + S + ++ + ++D R+ D + K E+GW P + G Sbjct: 217 -FTVGALAEQIIAMTGSRSRIVYYPLPVDD----PRQRRPDITVAKRELGWEPTVALAQG 271 Query: 317 LNKTVCWY 324 L T+ ++ Sbjct: 272 LEPTIAYF 279 >gi|163757906|ref|ZP_02164995.1| GDP-mannose 4,6-dehydratase [Hoeflea phototrophica DFL-43] gi|162285408|gb|EDQ35690.1| GDP-mannose 4,6-dehydratase [Hoeflea phototrophica DFL-43] Length = 352 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/337 (24%), Positives = 144/337 (42%), Gaps = 49/337 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-----EISQSNLFSFLQVD 58 ++TG G G+ L +L++ QV I + T N + E +S F D Sbjct: 11 LITGVTGQDGAYLSEFLLSK-GYQVHGIKRRTSLFNTARIDHLFDGEYGRSGQFVLHHGD 69 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L++ +PD + N AA+SHV S + ++ +GT LLE R+ Sbjct: 70 MTDSSSLTHILQQTKPDEVYNLAAQSHVAVSFEEPEYTANSDALGTLRLLEAIRILGLA- 128 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D+ +F Q ST E+YG + + +E P+ P SPY K + ++ + + YG+ Sbjct: 129 -----DKSKFYQASTSELYGLVQETPQTERTPFYPRSPYGVAKLYAYWITVNYREAYGLY 183 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ R+ G V G+ +RDW + D+V + Sbjct: 184 ACNGILFNHESPLRGETFVTRKITRALARIKLGQQDVLKLGNLDALRDWGHARDYVEMQW 243 Query: 235 LVLKKGR-------IGERYNIGG-------------NNERKNIDIVFE--IGFLLDALIP 272 L+L++ G +Y++ N E + +D V G ++ ++ P Sbjct: 244 LMLQQDEPEDFVIATGVQYSVRDFVLAAAQALGMTINFEGQGVDEVGRDPSGKVIVSVDP 303 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 + + TE+ + D+SK K ++GW P Sbjct: 304 RYFRPTEVETLLG-----------DASKAKQKLGWTP 329 >gi|29346634|ref|NP_810137.1| GDP-mannose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] gi|29338531|gb|AAO76331.1| GDP-mannose 4,6-dehydratase [Bacteroides thetaiotaomicron VPI-5482] Length = 356 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ Q + D+ D + +++ QPD I N AA+SHV S + + I Sbjct: 52 VRDMKQKRTINLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAI 111 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L + K R Q ST E++G + + E P+ P SPY K Sbjct: 112 GTLRMLEAVRI----LGLETKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQ 165 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 166 YGFWITKNYRESYGMFAVNGILFNHESERRGET-FVTRKISLAAARIAQGEQDKLYLGNL 224 Query: 218 QNVRDWLYVEDHVRALYLVLKKG-------RIGERYNI------------------GGNN 252 RDW Y +D+V ++L+L+ GE + + G Sbjct: 225 DARRDWGYAKDYVECMWLILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGV 284 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + K ID+ G +L + PK + RP + D +K ++ +GW P++ Sbjct: 285 DEKGIDVA--TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKARTLLGWNPRKT 331 >gi|317063639|ref|ZP_07928124.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|313689315|gb|EFS26150.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium ulcerans ATCC 49185] Length = 325 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/276 (28%), Positives = 123/276 (44%), Gaps = 22/276 (7%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D E I ++ +PD ++N A V S+ E+ N+ GT LLE SC Sbjct: 67 DIRDNEKIEEIFEKEKPDFVINLAGLGGVRPSLEKPLEYEAVNVRGTMNLLE------SC 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + K +F+Q S+ VYG+ K F E D+ SPY+ATK S + + + YG Sbjct: 121 KNLGIK---KFIQASSSSVYGNNKKAPFKETDIVDFAISPYAATKKSCEVMGHVYHKLYG 177 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I + YG P+ I ++EG + YG+G RD+ Y++D V+ + Sbjct: 178 IDMFQLRFFTVYGERQRPDLAIYKFTKMIMEGREIPFYGEGNTFRDYTYIKDIVQGIKKS 237 Query: 237 L----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 + I E N+G +N ++V I +L+ ++ + D+ Sbjct: 238 IDYLENNSNIYEILNLGESNTVSLKEMVTTIENVLEI-------KAKINKLPIQMGDVDK 290 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 YA D K + IG+ P E G+ K V W+ +NN Sbjct: 291 TYA-DIRKARELIGYNPTTEFEDGIRKFVKWFKENN 325 >gi|209919503|ref|YP_002293587.1| GDP-mannose 4,6-dehydratase [Escherichia coli SE11] gi|209912762|dbj|BAG77836.1| GDP-mannose 4,6-dehydratase [Escherichia coli SE11] Length = 373 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q ++ F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHIGNSKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|29841190|gb|AAP06203.1| SJCHGC02171 protein [Schistosoma japonicum] gi|226466800|emb|CAX69535.1| GDP-mannose 4,6-dehydratase [Schistosoma japonicum] Length = 364 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 17/246 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS-----FLQV- 57 ++TG G GS L +L++ L V I + + N + + I + N S FL Sbjct: 18 LITGITGQDGSYLAEFLLS-LGYMVHGIIRRSSTFNTSRINHIYEKNKISSEKRFFLHYG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + + PD I N AA+SHV S F + G + L RL + Sbjct: 77 DMTDSSSLIKVMSKVMPDEIYNLAAQSHVKVS------FDLSEYTGNVVALGTLRLLDAI 130 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + +F Q S+ E+YG + + SE P+ P SPYS K + ++V+ + +YG+ Sbjct: 131 RTCKLEKSVKFYQASSSELYGKVVETPQSEKTPFYPRSPYSVAKLYAYWIVVNYRESYGM 190 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ +G V G+ RDW + D+V+A+ Sbjct: 191 FACNGILFNHESPRRGETFVTRKISRAVVRIKKGLQDVLELGNLNAERDWGFAGDYVKAM 250 Query: 234 YLVLKK 239 +L+L++ Sbjct: 251 WLMLQR 256 >gi|13476536|ref|NP_108106.1| dTDP-glucose 4-6-dehydratase [Mesorhizobium loti MAFF303099] gi|14027297|dbj|BAB54251.1| dTDP-glucose 4-6-dehydratase [Mesorhizobium loti MAFF303099] Length = 346 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 137/334 (41%), Gaps = 39/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R +V GGAGF+GS LC L+ D V+ +D + G +L + + F+ ++ DI D Sbjct: 25 RALVAGGAGFLGSHLCERLLRD-GYDVVALDNF-HTGKRYNLNTLLRDPRFTCIEHDIVD 82 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I N A + T+++G+ LLE R Sbjct: 83 -----PLPAGLEVDEIYNLACPASPAHYQADPIHTFKTSVLGSLNLLELAR--------- 128 Query: 122 KKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + Q ST EVYG + F + P S Y K S++ L + TYG Sbjct: 129 -RSNAKIFQASTSEVYGDPLVHPQPESYFGNVNTHGPRSCYDEGKRSAETLFFDYSRTYG 187 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YG P+ +++ I + + G + +YG G R + Y +D + Sbjct: 188 LDIRVARIFNTYGRRMQPDDGRVVSNFIVQALRGEDLTVYGSGLQTRSFCYADDLIEGFI 247 Query: 235 LVLKKGRI-GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---GH 290 ++ N+G E F I L ++ + S ++++ RP Sbjct: 248 RLMNAPHAPAHPVNLGNPGE-------FTIMELATLVVGYTNSRSKIVH----RPLPIDD 296 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S + +GW P+ N+ GL TV ++ Sbjct: 297 PRQRKPDISFARDNLGWEPRINLAQGLAHTVDYF 330 >gi|238763328|ref|ZP_04624292.1| Vi polysaccharide biosynthesis protein vipB/tviC [Yersinia kristensenii ATCC 33638] gi|238698427|gb|EEP91180.1| Vi polysaccharide biosynthesis protein vipB/tviC [Yersinia kristensenii ATCC 33638] Length = 342 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 148/336 (44%), Gaps = 32/336 (9%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQVD 58 ++TG AGFIGS L L+ + +V+ +D + N SL Q F+F++ D Sbjct: 18 LITGVAGFIGSNLLESLLLLNQ-KVVGLDNFSTGHQYNLDEVQSLVTADQWAQFTFIEGD 76 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFIT--TNIIGTFILLEETRLWWS 116 ICD + + A+ + +++ AA V RSI AD T NI G +L R Sbjct: 77 ICDADVCQKAV--VGVNYVLHEAALGSVPRSI--ADPLTTNAANITGFLNMLVAAR---- 128 Query: 117 CLSQDKK-DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 DKK D F + S+ YG E+ NP SPY+ TK ++ + TY Sbjct: 129 ----DKKVDSFTYAASSS--TYGDHPALPKVEENIGNPLSPYAVTKYVNELYAQVFARTY 182 Query: 176 GIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G + N +G P +IP + MI VF+ GDG+ RD+ Y+E+ V+ Sbjct: 183 GFKTIGLRYFNVFGKRQDPNGAYAAVIPKWTSAMINNDDVFINGDGETSRDFCYIENVVQ 242 Query: 232 A--LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L + E YN+ +R ++ +F L +AL + + + + + R G Sbjct: 243 MNILAALANDAAKNEVYNVAV-GDRTTLNELFNA--LKNALRNNNVVYEKSAVYQDFRSG 299 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R D SK K + + N+ G+ + + WY+ Sbjct: 300 DVRHSQADISKAKRSLCYIASHNIFDGVEEAMPWYI 335 >gi|149006670|ref|ZP_01830356.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP18-BS74] gi|147761585|gb|EDK68549.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP18-BS74] gi|332072775|gb|EGI83256.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae GA17545] gi|332073942|gb|EGI84420.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae GA41301] Length = 339 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 56/357 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 +++VTGGAGFIG+ L+ QV+V+D L + N SL+ + + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELIQ-AGHQVVVVDNLVNS-NRKSLEVVERITGVEIPFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K+ +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDYL 167 ++ + + S+ VYG ED P + ++PY TK A S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSN-NYGPYHFPEKLIPLAITRMIEG--SHVFLYGD------GQ 218 V+ Y P+ S+ P P L+P +T++ G V ++GD G Sbjct: 173 VVLL--RYFNPIGAHESSDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDGT 229 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 VRD+++V D + LKK + G YN+G ++I+ + + IP Sbjct: 230 GVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGRPIP--- 286 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +E RPG D +K K+E+GW E+ L+ + ++ W W+ Sbjct: 287 -----YRIVERRPGDIAACYSDPAKAKAELGW------EAELD--ITQMCEDAWRWQ 330 >gi|114769651|ref|ZP_01447261.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HTCC2255] gi|114549356|gb|EAU52238.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HTCC2255] Length = 369 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 40/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---- 57 + ++TG G GS L +L+ +V I + + N + I + + + Sbjct: 3 KALITGITGQDGSYLAEFLLKK-GYEVHGIKRRASSLNTQRIDHIFEDPHLDNIHLKLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ +PD + N A+SHV S + + +G+ +LE R Sbjct: 62 GDLTDSSNLTRIIRDIEPDEVYNLGAQSHVAVSFEAPEYTADVDAMGSLRILEAIRFL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +++ RF Q ST E+YG + + +E+ P++P SPY+ K + ++ + + +YG Sbjct: 120 ----GLENKTRFYQASTSELYGLVKEIPQTENTPFHPRSPYAVAKLYAYWIAVNYRESYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I +TR+ G LY G+ +RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLTRIALGLETCLYMGNIDALRDWGHAKDYVRM 235 Query: 233 LYLVLKKGR--------------------IGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 +++L++ + + I K ID + + + + + P Sbjct: 236 QWMMLQQEKPDDFVIATGIQHSVRNFITWVASDLGIEIEFSGKGIDEIATVSKVNNEIAP 295 Query: 273 KSYSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQ 310 S + ++I I+ RP D SK K ++GW P+ Sbjct: 296 -SINVGDVIMRIDSRYFRPAEVETLLGDPSKAKEKLGWVPE 335 >gi|78779699|ref|YP_397811.1| GDP-mannose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9312] gi|78713198|gb|ABB50375.1| GDP-mannose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9312] Length = 367 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/352 (23%), Positives = 155/352 (44%), Gaps = 37/352 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+N QV I + + + N + + + Q + F D Sbjct: 17 LITGITGQDGSYLAEFLLNK-GYQVHGIKRRSSSLNTSRIDHLYQDPHELNQNFILHYGD 75 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +++ QPD I N A+SHV S + + +GT +LE R+ Sbjct: 76 LTDSTNLIRIIQDVQPDEIYNLGAQSHVAVSFETPEYTANCDALGTLRILEAIRIL---- 131 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ + Q ST E+YG + + +E P+ P SPY K + ++ + + +YGI Sbjct: 132 --GLENKTKIYQASTSELYGEVQETPQTEKTPFYPRSPYGVAKMYAYWITVNYRESYGIF 189 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFL-----YGDGQNVRDWLYVEDHVRAL 233 N+ P E + ITR + H L G+ ++RDW + +D+V Sbjct: 190 ACNGILFNHESPRR-GETFVTKKITRGLARIHCGLDDCIYLGNLDSLRDWGHAKDYVEMQ 248 Query: 234 YLVLKKGRIGERYNIGGNNE--RKNIDIVFE-IGFLLDA-------------LIPKSYSH 277 +L+L++ + G +E R+ ++I + +G+ + + K Sbjct: 249 WLMLQQDTPEDFVIATGRSESIRQFVEIAAQKLGWSKNENSSAIIWEGEGLNEVGKRKDT 308 Query: 278 TELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 E++ I+ RP DSSK + E+GW P+ +E + + + + L+ Sbjct: 309 GEIVVRIDKRYFRPAEVEALIGDSSKARKELGWEPKIRLEEMIEEMIKYDLE 360 >gi|269976054|ref|ZP_06183058.1| UDP-glucose 4-epimerase [Mobiluncus mulieris 28-1] gi|269935882|gb|EEZ92412.1| UDP-glucose 4-epimerase [Mobiluncus mulieris 28-1] Length = 328 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/341 (23%), Positives = 154/341 (45%), Gaps = 55/341 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IG+ + R L+ +++V+D L+Y S + I + L D Sbjct: 1 MKVMVVGGAGYIGAHVVR-LLETRGDEIVVVDDLSY----GSPERIGGAELVKLDCADAS 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + +A++ DA+++FAA V S+ + NI G ++L+ + Sbjct: 56 RYPQLLAAMRGV--DAVIHFAARKQVGESVQKPAWYYQQNIGGLALVLQ---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + + + S+ VYG D + ED+ P +PY TK + ++ A +G+ Sbjct: 105 GEAGVGKMIFSSSAAVYGMPDTEIVPEDIEKRPINPYGETKLFGETMMAACQRAFGLRWI 164 Query: 179 ------VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG------DGQNVRDWLYV 226 V + S+ P LIP+ R++ G + ++G DG VRD+++V Sbjct: 165 GLRYFNVAGAGASDLGDPAIL--NLIPMVFERIVAGENPLIFGDDYPTPDGTCVRDYVHV 222 Query: 227 ED----HVRALYLVLKKGRIGER-----YNIG---GNNERKNIDIVFEIGFLLDALIPKS 274 +D H+ AL + + G+ +N+G G + ++ +D+V ++ + P+ Sbjct: 223 QDLAQAHLEALDYMSRAEAAGQDLEYHVFNVGTSTGYSVKEVVDVVAKVTGI--DFTPEV 280 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 + R G R DS++I+ +G+ P+ N+E Sbjct: 281 CAR---------RAGDPPRLIADSTRIRQIMGFEPRYNLEQ 312 >gi|261251158|ref|ZP_05943732.1| UDP-glucose 4-epimerase [Vibrio orientalis CIP 102891] gi|260938031|gb|EEX94019.1| UDP-glucose 4-epimerase [Vibrio orientalis CIP 102891] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M ++VTGG G+IGS C ++ + ++ ++ D L Y + L+ I + + F++ D Sbjct: 1 MNVLVTGGMGYIGSHTCIQMI-EAGMKPVIFDNL-YNSKSSVLERIEKVSGVRPHFIEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+E ++ AL+ DA+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKERLKDALETHHIDAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDY 166 + + S+ VYG +ED P + ++PY +K A+ D+ Sbjct: 113 ---EVGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQQANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ S G P P L+P ++++ G FL +G D Sbjct: 170 SITLL--RYFNPV-GSHPSGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGNDYPTPD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D H+ AL V +K + YN+G N +++V +P Sbjct: 226 GTGVRDYIHVMDLSDGHIAALKKVGRKDGL-HIYNLGTGNGSSVLEMVKAFELASGKQVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG + +K +E+ W + ++E T W +N Sbjct: 285 --------YKIVERRPGDIAECWANPAKAMNELEWQAKRSLEEMTADTWRWQSNN 331 >gi|258540194|ref|YP_003174693.1| NAD-dependent epimerase/dehydratase [Lactobacillus rhamnosus Lc 705] gi|257151870|emb|CAR90842.1| NAD-dependent epimerase/dehydratase [Lactobacillus rhamnosus Lc 705] Length = 311 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 17/235 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L L+ D + ++D L+ N I S+ +F + I D Sbjct: 5 LVTGGAGFIGSNLTELLLTDPDNTITIVDDLSMGLRTN----IPDSSRITFYEHSITDHA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL-WWSCLSQDK 122 + L E + D IV AA + V S+ T + +E L L K Sbjct: 61 FMSQLLMEGRFDYIVLLAAIASVADSV--------ERPYATHQVNQEANLNIIETLRTQK 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + S+ VYG + EDM P + Y+ K +++ VL +G Y +P++ + Sbjct: 113 IPYKKLFFASSAAVYGDSPELPKKEDMAVKPLTQYAVDKFATERAVLNYGRLYDMPMVCT 172 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 N YGP P+ ++ + + + E +GDG+ RD++YV D V A+ Sbjct: 173 RFFNVYGPKQNPKSPYSGVLSIMMAALQEDKPFTFFGDGEQTRDFIYVGDVVHAI 227 >gi|212694648|ref|ZP_03302776.1| hypothetical protein BACDOR_04179 [Bacteroides dorei DSM 17855] gi|237711087|ref|ZP_04541568.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|237727440|ref|ZP_04557921.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D4] gi|265750673|ref|ZP_06086736.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] gi|212663149|gb|EEB23723.1| hypothetical protein BACDOR_04179 [Bacteroides dorei DSM 17855] gi|229434296|gb|EEO44373.1| GDP-mannose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] gi|229454931|gb|EEO60652.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|263237569|gb|EEZ23019.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] Length = 359 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 74/355 (20%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 +++G G GS L +L+ N +I+ L +D+ ++++ Sbjct: 7 LISGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTARIEHLYLDEW--------VRDMK 58 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 Q+ L + D+ D + ++ QPD I N AA+SHV S + + +GT + Sbjct: 59 QNRLVNLHWGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVSFDVPEYTAEADAVGTLRM 118 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK + Q ST E++G + + E P+ P SPY K ++ Sbjct: 119 LEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQYGFWI 172 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 173 TKNYRESYGMFAVNGILFNHESERRGET-FVTRKITLAAARIAQGFQDKLYLGNLNSLRD 231 Query: 223 WLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNNERKNI 257 W Y +D+V ++L+L+ GE + + G K I Sbjct: 232 WGYAKDYVECMWLILQHDTPEDFVIATGEYHTVREFATLAFKEVGIDLHWEGEGVNEKGI 291 Query: 258 DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 D G +L + PK + RP + D +K K+ +GW P++ Sbjct: 292 DTA--TGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 333 >gi|89889760|ref|ZP_01201271.1| GDP-D-mannose dehydratase [Flavobacteria bacterium BBFL7] gi|89518033|gb|EAS20689.1| GDP-D-mannose dehydratase [Flavobacteria bacterium BBFL7] Length = 375 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 59/356 (16%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 ++TG G G+ L +L+ +V I + N + + + Q F D Sbjct: 10 LITGVTGQDGAYLSEFLLKK-GYEVHGIKRRASLFNTDRIDHLYQDPHETDVKFKLHYGD 68 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +KE QPD I N AA SHV S + + IG +LE RL L Sbjct: 69 LTDTTNLTRIIKETQPDEIYNLAAMSHVQVSFEMPEYTANADGIGALRILESVRL----L 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK + Q ST E+YG + + SE P+ P SPY+ K + + + + YG+ Sbjct: 125 GMEKKT--KVYQASTSELYGKVQEIPQSETTPFYPRSPYAVAKMYAYWATVNYREAYGMF 182 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A +++++G +Y G+ RDW + +D+VR ++ Sbjct: 183 ACNGILFNHESPVRGETFVTRKITRATSKIVKGLQDKVYLGNLDAKRDWGHAKDYVRMMW 242 Query: 235 LVLKKGR--------------------------IGERYNIGGNNER------KNIDIVFE 262 ++L+ I +N G +E+ N D E Sbjct: 243 MILQHDEPEDWVIATGTTTSVRDFVRMAFQYVGIEIEFNGEGVDEKGMVKSCSNPDYQLE 302 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLN 318 IG + A+ P+ + TE+ I D +K K ++GW P+ ++ +N Sbjct: 303 IGKEVVAVDPRYFRPTEVDLLIG-----------DPTKAKEKLGWVPEIVLQELVN 347 >gi|253996397|ref|YP_003048461.1| GDP-mannose 4,6-dehydratase [Methylotenera mobilis JLW8] gi|253983076|gb|ACT47934.1| GDP-mannose 4,6-dehydratase [Methylotenera mobilis JLW8] Length = 361 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +++ QPD I N AA+SHV S + ++ +G +LE R+ Sbjct: 64 DMTDSSSLTHIIQKVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRIL--- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YGI Sbjct: 121 ---GLQNKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITINYREAYGI 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ G LY G+ +RDW + +D+V Sbjct: 178 YACNGILFNHESPIRGETFVTRKITRALARIKLGLQECLYLGNMNALRDWGHAKDYVEMQ 237 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +L+L++ + G +Y++ ++ I + + + K Y + D Sbjct: 238 WLMLQQEQPEDFVIATGVQYSVRDFVNAAAKELGMAIAWKGEGVDEKGYDASGKCIVAVD 297 Query: 287 ----RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RP D+SK K+++GW P+ + + +++ V Sbjct: 298 SRYFRPTEVETLLGDASKAKNKLGWVPKISFDELVSEMV 336 >gi|289582648|ref|YP_003481114.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] gi|289532201|gb|ADD06552.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] Length = 388 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/358 (24%), Positives = 144/358 (40%), Gaps = 62/358 (17%) Query: 3 LIVTGGAGFIGSALCRYLV--NDLKIQVLVIDKLTYAG--NLNSLKEISQSN-------- 50 ++VTGG GFIGS L L ND++ V+D + NL+S+ +N Sbjct: 11 VLVTGGGGFIGSHLVEALAPYNDVR----VLDNFSTGSRDNLSSVTSPQWTNDAPTSADG 66 Query: 51 ------------------------LFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHV 86 + + DI D ++ A + D I + AA V Sbjct: 67 GFDDAGGGGDAGDAGDAGDARYDGSPTIIDGDITDPMALQRAARGV--DLIFHQAALVSV 124 Query: 87 DRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFS 146 +S+ TN+ + ++L++ R ++ R + S+ VYG D+ S Sbjct: 125 AKSVDAPRRSNETNLDASLLVLDQAR----------QEDARVVLASSAAVYGHPDELPVS 174 Query: 147 EDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGP-YHFP-EKLIPLAITR 204 E P+SPY K + D + Y +P + N YGP P +I + + Sbjct: 175 ETARTEPTSPYGIQKLALDQYARRYHELYDLPTVALRYFNAYGPRQQGPYSGVISTFLEQ 234 Query: 205 MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIG 264 + + GDG+ RD+++V D VRA +GE YN+ G +R +I + E Sbjct: 235 ARSDDPITIEGDGEQTRDFVHVSDVVRANIRAATTDAVGEAYNV-GTGDRTSIRDLAE-- 291 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 L+ + + I E RPG R D SK E+G+ + +ESG+ V Sbjct: 292 -----LVRDAVGSSSPIVHREPRPGDIRHSRADVSKASRELGFETRVGLESGIRSLVA 344 >gi|168183212|ref|ZP_02617876.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|182673598|gb|EDT85559.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] Length = 354 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 33/260 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT-----------YAGNLNSLKEISQ- 48 M ++VTGGAGFIG + + L+ + +V+ +D L+ Y L+ +K + Sbjct: 1 MNILVTGGAGFIGRWVVKILLLEGH-EVVALDNLSNGRLENIYEFVYEDKLDYIKNNKEN 59 Query: 49 -SNL----FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 S+L F F++ DI D + K+ + D + + A +V SI + +G Sbjct: 60 ISDLEGEKFKFIKGDIKDDALLDKLFKKNKFDIVYHLGASINVQESIDDPKTTFYNDTVG 119 Query: 104 TFILLEETRLW------------WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY 151 TF +LE+ + W +K + + +ST VY + E+ Sbjct: 120 TFNILEKCKTQMFGKKAKMEGDKWILDKNEKAYPCKVVFMSTCMVYDKAPEVGIDEEHRV 179 Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE---KLIPLAITRMIEG 208 P SPY K +++ +VL++ + Y +P ++ N YGP+ ++ + I +E Sbjct: 180 KPISPYGGAKIAAENMVLSYYNAYKLPTVVIRPFNTYGPFQKTNGEGGVVAIFINNYLEN 239 Query: 209 SHVFLYGDGQNVRDWLYVED 228 ++ +YG G+ RD LYV+D Sbjct: 240 KNLNIYGTGEQTRDLLYVKD 259 >gi|307330148|ref|ZP_07609297.1| NAD-dependent epimerase/dehydratase [Streptomyces violaceusniger Tu 4113] gi|306884168|gb|EFN15205.1| NAD-dependent epimerase/dehydratase [Streptomyces violaceusniger Tu 4113] Length = 332 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 133/328 (40%), Gaps = 33/328 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ V D T G ++ + F+ L+ D+ + Sbjct: 25 VVTGGAGFVGSHLCSSLLAQGATVTCVDDFCT--GTPENVAHLRGRTGFTLLRRDVTEPF 82 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + E D +++FA+ + + + T +GT + L+ ++ Sbjct: 83 DV-----ERPADLVLHFASPASPADYLRLPLHTLETGSLGT----------RNALALARR 127 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST E YG + SE P P S Y K + L +A + G Sbjct: 128 HGARFVLASTSEAYGDPQQHPQSERYWGNVNPVGPRSVYDEAKRFGEALTIAEAGSNGTD 187 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP + +P I + + G + + GDG R Y++D VR + L Sbjct: 188 TAVVRLFNTYGPRMRGHDGRAVPTFIRQALAGEPLTVTGDGAQTRSLAYIDDTVRGI-LA 246 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + + NIG +E +D+ +I L S S E I D P Sbjct: 247 MAASDLRGPVNIGNADEITMLDLAHKIIRLA-----GSRSTVEFIGRPTDDPA---VRCP 298 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + ++ W P + + GL +T+ W+ Sbjct: 299 DITLARGKLQWAPAVSADEGLARTIEWF 326 >gi|313201556|ref|YP_004040214.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] gi|312440872|gb|ADQ84978.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] Length = 324 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 52/329 (15%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +V GGAG+IGS + + L+ + V+ D L+ +G +++ +F+Q D+ D+ Sbjct: 1 MVVGGAGYIGSHMVKMLLGEGH-DVITFDNLS-SGYRDAVVG------GTFVQADLADKA 52 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + PDA+++FA+ V S+ D++ N T LL+ + ++ Sbjct: 53 ALDEVFVKHAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLD-------AMVKNGV 105 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL-- 181 + F F ST V+G + E NP +PY +K + + + YGI + Sbjct: 106 NYFIFS--STAAVFGEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSVCLR 163 Query: 182 ------SNCSNNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQNVRDWLYV 226 ++ G H PE LIPL + + I G ++ ++G DG +RD++++ Sbjct: 164 YFNAAGADPEGQLGERHEPETHLIPL-VLQAISGRRDNITVFGRDYDTPDGTCIRDYIHI 222 Query: 227 EDHVRALYLVLKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-ELIR 282 D A L L+K I RYN+G GF + +I + T + I+ Sbjct: 223 VDLCSAHSLALRKLMETNISRRYNLGNG-----------AGFSVQEVIAAAQKVTGKPIK 271 Query: 283 FIED--RPGHDRRYAIDSSKIKSEIGWFP 309 E R G R D+S +SE+GW P Sbjct: 272 VAEGERREGDPARLVADASLARSELGWKP 300 >gi|187932562|ref|YP_001885902.1| UDP-glucose 4-epimerase [Clostridium botulinum B str. Eklund 17B] gi|187720715|gb|ACD21936.1| UDP-glucose 4-epimerase [Clostridium botulinum B str. Eklund 17B] Length = 329 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 158/353 (44%), Gaps = 56/353 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+++ V+V + LT G+ ++ E ++ F + DI Sbjct: 1 MSILVLGGAGYIGSHAVSQLIDNDYDVVVVDNLLT--GHKEAINEKAK-----FYKGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E +++ ++ +A+++FAA S V S++ ++ N+ GT +LLE Sbjct: 54 DKEFLKNVFEKESFEAVIHFAANSLVGESMVDPLKYFNNNVQGTQVLLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++F I ST YG + +E+M P++PY TK + + ++ YGI Sbjct: 105 ---NEFNVKNIVFSSTAATYGEPKQIPITEEMETCPTNPYGETKLTMEKIMKWCDKAYGI 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + G H PE LIP+ + + + + +YG DG VR Sbjct: 162 KYVSLRYFNVAGAREGGVIGEDHNPETHLIPIVLQVALGKRDFITIYGEDYDTEDGTCVR 221 Query: 222 DWLYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP---KSY 275 D+++VED + A L +K G +N+G + GF + +I K Sbjct: 222 DYIHVEDLIEAHILAMKYLLNGGQSNIFNLGSSQ-----------GFSVKEIIESARKVT 270 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP-QENMESGLNKTVCWYLDN 327 H+ + + R G + S K + +GW P + N+ + W+ +N Sbjct: 271 KHSIPAQIGKRRAGDPSKLVASSDKARKILGWNPSRTNITKIIEDAWVWHTNN 323 >gi|322436339|ref|YP_004218551.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] gi|321164066|gb|ADW69771.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] Length = 322 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 40/326 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAG+IG + R L+ + +V V D L ++ + + + +F++ D+ Sbjct: 1 MKILVTGGAGYIGGTVSRLLL-ERGHEVTVFDSLCHS------RRSAIAEGVTFVEGDLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L + D +++FAA S+ + + N GT LLE + Sbjct: 54 DSALLEKTLNAGKFDGVLHFAALIEAGESMKQPEVYFRNNTAGTLTLLE---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + ST YG +K +E+ P++ Y +K S++++ H++G+ Sbjct: 105 LATGHNKLVFSSTAACYGEPEKTPITEEARLAPTNAYGESKLLSEHMMRWMHHSHGLRYA 164 Query: 181 ------LSNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 ++ YG H PE LIPL + + + + ++G DG VRD+++V Sbjct: 165 ALRYFNVAGAIPGYGENHEPESHLIPLVLDVALGRRASIKIFGQDYPTPDGTCVRDYVHV 224 Query: 227 E--DHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L L + + YN+G ++++ + + IP + Sbjct: 225 QDLADAHLLALAALEDKAPLIYNLGSGTGFTVLEVIESVRRVTGKEIP--------VELC 276 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG S KI+ E+GW PQ Sbjct: 277 PRRPGDPAVLVASSEKIQQELGWKPQ 302 >gi|284008909|emb|CBA75746.1| probable nucleotide sugar epimerase [Arsenophonus nasoniae] Length = 352 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/343 (23%), Positives = 156/343 (45%), Gaps = 37/343 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ ++TG AGFIG LC+ L+ + QV+ +D L Y +L L+ ++ + F FL+ Sbjct: 22 MKYLITGCAGFIGFTLCQRLLQNGH-QVVGLDNLNHYYDPDLKKARLERLTIYSQFQFLR 80 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI +RE + + + D +++ AA++ V S+ + +N+ G +LE ++ Sbjct: 81 LDIIEREKVIEVITLGKFDRVIHLAAQAGVRYSLKDPFAYADSNLTGFLSILEGC--YYG 138 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + + S+ VYG ++ S ++ + P S Y+ATK +++ + A+ H Y Sbjct: 139 QIPH-------LIYASSSSVYGMNNQFPCSTNISVDHPISLYAATKRANELMAHAYSHLY 191 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 +P YGP+ P+ + ++E + +Y +G RD+ +VED V + Sbjct: 192 NLPTTGLRFFTVYGPWGRPDMALFKFTKAILEMKPIDVYNNGDLSRDFTFVEDIVAGILS 251 Query: 236 V--LKKGRIGER------------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 + + + +R YNIG K +D + + + ++ + Sbjct: 252 IADIIPPKKTDRSLTANSDAPYRIYNIGNGQPIKLLDFI--------SALEQALGKKAIK 303 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + G D+ + S G+ PQ +++ G+ V WY Sbjct: 304 NMLPMQAGDVHTTWADTKDLFSLTGYRPQISIKEGVKAFVDWY 346 >gi|149922804|ref|ZP_01911228.1| NAD-dependent epimerase/dehydratase family protein [Plesiocystis pacifica SIR-1] gi|149816347|gb|EDM75849.1| NAD-dependent epimerase/dehydratase family protein [Plesiocystis pacifica SIR-1] Length = 360 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 30/252 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL----------FS 53 ++TG AGFIGS L +L+ L +V+ +D G ++L + + + F Sbjct: 19 LITGVAGFIGSHLAEHLLA-LGQRVVGVDNFD-TGKRDNLDALVRGAVGRGACEVEAHFE 76 Query: 54 FLQVDICDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 F ++D+ D E +R A F + +++ AA + V R++ + + N+ G F LLE R Sbjct: 77 FRELDVRDPEALRQACARFDGVEHVLHHAAVASVPRTLAEPETAHSVNVDGMFNLLEAAR 136 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYG----SLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 +C ++ + ++ VYG + + G SE + P SPY+ K ++ L Sbjct: 137 ---ACGAKS------VVHATSSAVYGDCPGAPETGAQSEAIIGRPLSPYAGQKRIAEVLG 187 Query: 169 LAWGHTYGIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 W T+G+ V+ N GP P +IP I + G ++GDG RD+ Sbjct: 188 QTWSTTHGMSVVGLRYFNIVGPRQDPNGAYAAVIPKWIDTLARGEQPVIFGDGLTTRDFC 247 Query: 225 YVEDHVRALYLV 236 VED V+A L Sbjct: 248 PVEDVVQANLLA 259 >gi|329944278|ref|ZP_08292537.1| NAD dependent epimerase/dehydratase family protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531008|gb|EGF57864.1| NAD dependent epimerase/dehydratase family protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 375 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 52/356 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG A+ R L + +V+ +D + + + + ++D+ E Sbjct: 17 LVTGGAGFIGCAISRDLADAFD-RVVALDNMHPQIHPSQGRPSELDERVELHRLDVSVAE 75 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 AL E PD IV+ AAE+ +S+ A + N++GT +L+ L + + Sbjct: 76 DWDRALAEVAPDVIVHLAAETGTGQSLTEASRHASVNVVGTTQMLD-------ALVRHEI 128 Query: 124 DQFRFLQISTDEVYGS--------------------LDKGLF-----------SEDMPYN 152 + + S+ VYG L+ G + S + + Sbjct: 129 RPDKIVLASSRAVYGEGQWVDHEGRPSYPGQRTHAMLEAGQWDFEGLTPSVQSSTAVKAS 188 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIE-G 208 P++ Y+ATK + LV +W ++G+ +L N YGP P I R+ + G Sbjct: 189 PANVYAATKYCQENLVTSWCGSFGVTPVLYRLQNVYGPGQSLINPYTGIVSLFARLAKAG 248 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYL-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 + +Y DG+ VRD+++++D A+ L + Y+IG + I I Sbjct: 249 RSIPVYEDGRIVRDFVFIDDVASAIVAGALHSPAAVDPYDIGLGERTTIMQIAQAIAERY 308 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 A P + R G R D+++ + + W P + G+N+ W Sbjct: 309 GAPAPHVTG--------QFRDGDVRAAWADTTRARQALSWKPLVGVTEGINRLCDW 356 >gi|294629322|ref|ZP_06707882.1| UDP-glucose 4-epimerase [Streptomyces sp. e14] gi|292832655|gb|EFF91004.1| UDP-glucose 4-epimerase [Streptomyces sp. e14] Length = 323 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 62/341 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAG+IG+ + R L + V+V D L+ G+ + + + + + L D+ Sbjct: 1 MNWLVTGGAGYIGAHVVRALTEGGE-SVVVYDDLS-TGSADRVPDGVPLVVGTVLDADLL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R L++ +V+ AA+ V S+ + N+ G LL + ++ Sbjct: 59 ER-----TLRDHDISGVVHIAAKKQVGESVERPLYYYRENVTGLQTLL-------AAMTA 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F S+ VYG D L +ED P P SPY TK ++L+ A +G+ Sbjct: 107 TGVDRIVFS--SSAAVYGMPDVDLVTEDTPCVPMSPYGETKLVGEWLIAAAARAHGLKAA 164 Query: 181 LSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G PE L+P+ R+ G ++G DG VRD+++V+ Sbjct: 165 ALRYFNVAGAA-TPELSDSGAFNLVPMVFERLEAGRAPLIFGDDYATPDGTCVRDYIHVQ 223 Query: 228 DHV--------------RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 D LVL GR G++ R+ +D++ K Sbjct: 224 DIASAHLAAARRLADAPEGTSLVLNIGR------SEGSSVREMVDLIL-----------K 266 Query: 274 SYSHTELIRFIED-RPGHDRRYAIDSSKIKSEIGWFPQENM 313 + ++ + D RPG R + +I++E+GW + + Sbjct: 267 TTGREDIAPEVTDRRPGDPARVVASADRIRAELGWSARHGL 307 >gi|218883571|ref|YP_002427953.1| NAD-dependent epimerase/dehydratase [Desulfurococcus kamchatkensis 1221n] gi|218765187|gb|ACL10586.1| NAD-dependent epimerase/dehydratase [Desulfurococcus kamchatkensis 1221n] Length = 331 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 32/333 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKI-QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI 59 MR +VTGGAGFIGS L YLV LK +V+VID L+ +G+ +++ + + ++ D+ Sbjct: 12 MRYVVTGGAGFIGSHLVDYLVYRLKADEVVVIDNLS-SGSPRNIEMHIDAGVVRLVKADL 70 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 R LK D + ++AA V S + N++ TF +LE RL Sbjct: 71 SKRGEWEKGLK--GADIVFHYAANPEVRISSVEPGIHFENNVVATFNVLEAMRL------ 122 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 D + + S+ VYG ED P P S Y A+K +S+ L+ + YG Sbjct: 123 ---GDVDKLVFASSSTVYGEPSVIPTPEDYHPLKPISIYGASKLASEVLIQVYSELYGFK 179 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LYLVL 237 L+ +N G ++ S + + GDG + +L+V D V A ++L + Sbjct: 180 ALILRYANIIGARSNHGVIVDFINKLRTNPSRLEILGDGTQRKSYLHVSDAVEATMHLAV 239 Query: 238 KK---GRIGERYNIGGNN-----ERKNIDIVFEIGF-LLDALIPKSYSHTELIRFIEDRP 288 K + YN+G ++ E +I IV E+G +D + K+ P Sbjct: 240 NKLNSMHGVDVYNVGNHDWVTVTEIADI-IVEEMGLGRVDYVFKKTTPDG------RGWP 292 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 G + +D K++S GW P+ + + +TV Sbjct: 293 GDVKLMLLDIRKLES-TGWKPRLSSRDAVRRTV 324 >gi|224054811|ref|XP_002298368.1| predicted protein [Populus trichocarpa] gi|118481127|gb|ABK92517.1| unknown [Populus trichocarpa] gi|222845626|gb|EEE83173.1| predicted protein [Populus trichocarpa] Length = 346 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++L++ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-FTGSKDNLRKWIGQPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 92 EPLLV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + + G + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E ++ + L++ + I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMTELAETVKELINPGVE--------INMVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K+ +GW P+ + GL Sbjct: 304 RQRKPDITKAKALLGWEPKVKLRDGL 329 >gi|303241599|ref|ZP_07328098.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] gi|302590819|gb|EFL60568.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/335 (27%), Positives = 150/335 (44%), Gaps = 52/335 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS L+ + +V+++D L L + D+ Sbjct: 1 MAVLVTGGAGYIGSHTVAELL-ERNEEVIIVDNLEKGHKPAVLGG-------KLIVGDLR 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E I++ + +A+++FAA V S+ ++ N+ T LL + + + Sbjct: 53 DKEFIKNVFLQNDIEAVIHFAAYIEVGESVTDPLKYYNNNVAVTLNLL-------TAMKE 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIPV 179 + F ST YG + E P++PY TK S + L W YGI Sbjct: 106 AGVKKVVFS--STAATYGEPENIPILETDRTFPTNPYGETKLSVEK-ALKWSDGAYGIKH 162 Query: 180 LL--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDW 223 ++ ++ S N G H PE LIPL I M + + ++G DG VRD+ Sbjct: 163 VILRYFNACGAHISGNIGEDHSPESHLIPLIIQAAMGKRDSIKMFGNDYNTPDGTCVRDY 222 Query: 224 LYVEDHVRALYLVLKKGRIGER---YNIG---GNNERKNIDIVFEIGFLLDALIPKSYSH 277 ++V D +A YL L+K R ++ YN+G G + ++ +D+V ++ KS + Sbjct: 223 IHVSDLAQAHYLALQKLRNEDKSDIYNLGNGKGFSVKEVVDVVRKV-------TGKSITA 275 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + R RPG S KIK E+ W P+ N Sbjct: 276 VDAPR----RPGDPAILVASSEKIKKELNWKPRMN 306 >gi|260428865|ref|ZP_05782842.1| UDP-glucose 4-epimerase [Citreicella sp. SE45] gi|260419488|gb|EEX12741.1| UDP-glucose 4-epimerase [Citreicella sp. SE45] Length = 327 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 59/352 (16%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS C+ L + +TY + K+ + F Q D+ DR Sbjct: 4 VLVTGGAGYIGSHACKAL------KAAGYTPVTYDNLVTGWKDAVK--FGPFEQGDLSDR 55 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +QP A+++FAA S V ++ + N+ G+ L+E CL+ Sbjct: 56 ARLDEVFATYQPVAVMHFAALSQVGEAMSEPGRYWRNNVEGSLTLIEAATA-AGCLN--- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP---- 178 F+ ST YG D + E P P + Y A+K + + ++ + G+ Sbjct: 112 -----FVFSSTCATYGEHDNVVLDESTPQEPLNAYGASKRAVENILRDFEAAKGLRHVIF 166 Query: 179 ----VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFL--YG------DGQNVRDWLY 225 V ++ G +H PE LIP+ + I+G+ L +G DG +RD+++ Sbjct: 167 RYFNVAGADPEGEVGEHHRPETHLIPVML-EAIDGTRPALSIHGTDYDTPDGTCIRDYVH 225 Query: 226 VEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDA---LIPKSYSHTE 279 V D V A L LK G+ +N+G F + ++DA + + H+E Sbjct: 226 VCDLVDAHVLGLKWLTDGKGSRVFNLGTGKG-------FSVREVIDASRSVTNREVPHSE 278 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWW 331 R R G + S++ +E+GW P + T+ + + W W Sbjct: 279 GPR----RAGDATKLVSGSTRAAAELGWEPSRS-------TMPQMIADAWRW 319 >gi|256831031|ref|YP_003159759.1| GDP-mannose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256580207|gb|ACU91343.1| GDP-mannose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 383 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 12/187 (6%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + T+ +GT +LE R+ Sbjct: 64 DLTDSTNLIRIIQEVQPDEIYNLAAQSHVQVSFDSPEYTANTDALGTLRVLEAIRI---- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L DKK RF Q ST E+YG + + +E P+ P SPY+ K + ++ + + YGI Sbjct: 120 LGLDKKT--RFYQASTSELYGLVQEIPQTEKTPFYPRSPYACAKLYAYWITVNYREAYGI 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRA 232 N+ P F + I A+ R++ G VFL G+ RDW + +D+V Sbjct: 178 YGCNGILFNHESPMRGETFVTRKITRALARIVLGLQDKVFL-GNMNAKRDWGHAKDYVEM 236 Query: 233 LYLVLKK 239 +L+L++ Sbjct: 237 QWLMLQQ 243 >gi|170740319|ref|YP_001768974.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] gi|168194593|gb|ACA16540.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46] Length = 363 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 121/276 (43%), Gaps = 39/276 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG---NLNSLKEISQSNLFSFLQVDI 59 +++TGGAGFIG+ L L + + VL+ D L G NL+ LK S + D+ Sbjct: 10 ILITGGAGFIGANLADALAAEGR-DVLIYDALLRPGVEANLDWLKR-RHPRRVSAVVADV 67 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 R+ + + A+ +FAA+ V S++ E N+ T LLE R Sbjct: 68 --RDTASLSAAAARAGAVFHFAAQVAVTTSLVAPAEDFAVNLGATLALLEALR------- 118 Query: 120 QDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPS------------------SPYSAT 160 + D L ST++VYG L D E Y P+ +PY + Sbjct: 119 -GRPDPAPLLFSSTNKVYGDLGDLAFRREGEAYRPAEERLHRHGIGEDRSLDFHTPYGCS 177 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDG 217 K +D VL + ++G+P + S YGP + + + R +EG + +YGDG Sbjct: 178 KGGADQYVLDYARSFGVPTCVMRMSCIYGPRQMGTEDQGWVAHFLIRALEGQPIAIYGDG 237 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRI--GERYNIGGN 251 VRD L+V D V A L + + G YN+GG Sbjct: 238 CQVRDILHVADAVAAYRAALARIDLVSGRAYNLGGG 273 >gi|256616718|ref|ZP_05473564.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256596245|gb|EEU15421.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] Length = 330 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVIVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + Y + Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|255036653|ref|YP_003087274.1| UDP-glucose 4-epimerase [Dyadobacter fermentans DSM 18053] gi|254949409|gb|ACT94109.1| UDP-glucose 4-epimerase [Dyadobacter fermentans DSM 18053] Length = 339 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 74/366 (20%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGGAGFIGS L N + ++ID L Y NLN L+ I + F F ++D Sbjct: 1 MKILVTGGAGFIGSHTVVELHN-AGFEPVIIDNL-YNSNLNVLEGIKKITGKAFPFYEID 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D E +R+ ++ Q D +++FAA V S+ + N+I +LL + + Sbjct: 59 CNDAEKVRALFEKEQFDGVIHFAAYKAVGESVEKPLNYYENNLISLMVLLRAAQEF---- 114 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-SPYSATKASSDYLVLAWGHTYGI 177 D+F F T VYG ++ +E+ P P+ SPY TKA ++ ++ H + Sbjct: 115 ---NVDKFVFSSSCT--VYGQPEQLPVTENTPRLPANSPYGNTKAIAEDII--RDHVHSK 167 Query: 178 PVLLSNCSNNYGPY-------------HFPEKLIPLAITRMIEG--SHVFLYG------D 216 P L + + P P L+P IT+ G + ++G D Sbjct: 168 PALKAISLRYFNPIGAHETSLIGELPNGVPSNLVPF-ITQTAAGLRKSLTVFGSDYDTPD 226 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G +RD+++V D HV+AL L+ + N VF +G Sbjct: 227 GTCIRDFIHVVDLAKAHVKALDLLQSQ-------------TDTNYYDVFNVG------TG 267 Query: 273 KSYSHTELIRFIEDRPGHDRRYAI-------------DSSKIKSEIGWFPQENMESGLNK 319 + Y+ +LI E+ G Y+I S K+ + + W ++ M L Sbjct: 268 EGYTVLQLINTFEEVNGVKLNYSIGPRREGDVEKIYAQSDKVNNVMKWRAEKTMADALRD 327 Query: 320 TVCWYL 325 W L Sbjct: 328 AWNWQL 333 >gi|187735743|ref|YP_001877855.1| GDP-mannose 4,6-dehydratase [Akkermansia muciniphila ATCC BAA-835] gi|187425795|gb|ACD05074.1| GDP-mannose 4,6-dehydratase [Akkermansia muciniphila ATCC BAA-835] Length = 355 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 22/249 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL---------KEISQSNLFSF 54 +++G G GS L +L+ D +V I + + + N + +++ ++ L + Sbjct: 6 LISGITGQDGSFLAEFLI-DKGYEVHGILRRSSSFNTGRIEHLYLDEWVRDMKKNRLINL 64 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D + ++ QPD I N AA+SHV S + T+ +GT +LE R+ Sbjct: 65 HYGDMTDSSSLIRIIQTVQPDEIYNLAAQSHVKVSFDVPEYTAETDAVGTLRMLEAVRI- 123 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L +KK R Q ST E++G + + E P+ P SPY K ++ + + Sbjct: 124 ---LGMEKK--CRIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYRES 178 Query: 175 YGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDH 229 Y + +L ++ S G +F + I LA R+ +G LY G+ +RDW Y +D+ Sbjct: 179 YNMFAVNGILFNHESERRGE-NFVTRKITLAAARIAQGMQDKLYLGNLNALRDWGYAKDY 237 Query: 230 VRALYLVLK 238 V ++L+L+ Sbjct: 238 VECMWLILQ 246 >gi|150006427|ref|YP_001301171.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|149934851|gb|ABR41549.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] Length = 360 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 50/300 (16%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + ++ QPD I N AA+SHV S + + + Sbjct: 53 VRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 112 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 113 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 166 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G +F + I LA R+ +G LY G+ Sbjct: 167 YGFWITKNYRESYGMFAVNGILFNHESERRGE-NFVTRKITLAAARIAQGYQDKLYLGNL 225 Query: 218 QNVRDWLYVEDHVRALYLVLKKGR-------IGERYNI------------------GGNN 252 ++RDW Y +D+V ++++L+ GE + + G Sbjct: 226 DSLRDWGYAKDYVECMWMILQHDTPEDFVIATGEYHTVREFCTLAFKEVGIELRWEGKGV 285 Query: 253 ERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 + + ID+ G L A+ PK + RP + D +K K+ +GW P++ Sbjct: 286 DERGIDMA--TGKELVAVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRKT 332 >gi|219849037|ref|YP_002463470.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543296|gb|ACL25034.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 337 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 37/340 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGG GFIGS L LV +L QV ++D L Y GNL ++ I ++V+I Sbjct: 11 RVLITGGLGFIGSNLAHRLV-ELGAQVTLVDSLIPEYGGNLYNIAGIEDR-----VRVNI 64 Query: 60 CDRECIRSALKEFQP-DAIVNFAAE-SHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D S Q D + N A + SH+D S+ + N +LE R Sbjct: 65 ADVRDEYSMNYLVQGHDILFNLAGQTSHLD-SMRNPYTDLDINCRAQLSILEACR----- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + + ST ++YG D E +P K + ++ + + + YGI Sbjct: 119 ---KHNPRITVVYASTRQIYGKPDYLPVDERHLLHPVDVNGINKMAGEWYHILYNNVYGI 175 Query: 178 PVLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV-RA 232 +N YGP + + + I +IEG + ++GDG+ +RD+ Y++D V Sbjct: 176 RACALRLTNTYGPRMRVKDARQTFLGVWIRNVIEGKPIQVWGDGKQLRDFTYIDDCVDAL 235 Query: 233 LYLVLKKGRIGERYNIGG---NNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR-P 288 L L G+ +N+GG N R + E+ E+I + DR P Sbjct: 236 LLAALHPAATGQIFNLGGLEVINLRDLAALTVEVA---------GGGSFEIIPYPPDRKP 286 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 Y D +I+ +GW P+ ++ +GL +T+ +Y +++ Sbjct: 287 IDIGDYYADDRRIRQMLGWQPRIDLRTGLARTIAFYREHH 326 >gi|320102511|ref|YP_004178102.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319749793|gb|ADV61553.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 328 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 29/325 (8%) Query: 3 LIVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLN-SLKEISQSNLFSFLQV--- 57 ++VTG AGFIGS L L D +++ + Y G + E + ++ + ++V Sbjct: 7 VLVTGAAGFIGSHLVERLARDGHRVRAFI----RYNGRDDRGCLEWLEPDVLAQVEVVRG 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D E +R A++ + + A + S + I TN+ GT +L +C Sbjct: 63 DLKDPEAVRRAVRGCS--RVFHLGALIAIPYSYENPLDVIQTNVEGTAHVLN------AC 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 D D R + ST EVYG+ + E P SPY+A+K SD L +A+ ++G Sbjct: 115 RDSDSLD--RVVLTSTSEVYGTAQRVPIDESHPLVGQSPYAASKIGSDALGIAYHRSFGT 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 PV + N +GP ++P +++ + GS + L G RD V D V + Sbjct: 173 PVTILRPFNTFGPRQSTRAIVPTILSQALVGSTLRL-GSLAPRRDLTEVSDTVAGFVGIA 231 Query: 238 K-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR--RY 294 + +G NIG ++ ++V G +L + L RP R Sbjct: 232 ECDEALGRVVNIGRGSDVSIGELVELTGQVLGRRLSVETDPQRL------RPATSEVGRL 285 Query: 295 AIDSSKIKSEIGWFPQENMESGLNK 319 D+S + GW P+ ++E GL + Sbjct: 286 LADASLARRLFGWEPRVSLEEGLRR 310 >gi|302526724|ref|ZP_07279066.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4] gi|302526729|ref|ZP_07279071.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4] gi|302435619|gb|EFL07435.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4] gi|302435624|gb|EFL07440.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4] Length = 314 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 133/328 (40%), Gaps = 35/328 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+G+ LC L+ + +V +D L A +L +++ F L+ D+ Sbjct: 7 VVTGGAGFVGARLCAKLLEE-GARVTAVDNLATA-RPGALDAVARHPRFRLLEHDVTRPI 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A+ D + + A+ + E + GT L R Sbjct: 65 PVPGAV-----DVVFHLASPASPRDYYRLPLETLRVGSAGTENALAAAR----------- 108 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 RF+ ST EVYG + E P P S Y K ++ L A G Sbjct: 109 -GARFVLASTSEVYGDPLQHPQRETYWGNVNPIGPRSVYDEAKRYAEALTSAMRREKGAD 167 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 ++ N YGP + +++P IT+ + G + + G G+ R YV+D V L + Sbjct: 168 TGIARIFNTYGPGMRADDGRMVPSFITKALAGEPLTVEGSGRQTRSLCYVDDTVDGLLAL 227 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G G NIG +E V EI + A+ S + ++D RR Sbjct: 228 ARSGYPGP-VNIGNPHELS----VREIAERVIAITQSSSRIVHVEAAVDD----PRRRCP 278 Query: 297 DSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + +GW P+ GL +TV W+ Sbjct: 279 DISLARQVLGWSPRVAAGEGLRRTVDWF 306 >gi|312967271|ref|ZP_07781487.1| GDP-mannose 4,6-dehydratase [Escherichia coli 2362-75] gi|312288079|gb|EFR15983.1| GDP-mannose 4,6-dehydratase [Escherichia coli 2362-75] Length = 355 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 10/186 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I L+E +PD + N A SHV S + + IGT LLE R+ Sbjct: 47 DLTDTSNITRILQEVKPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRI---- 102 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 103 LGLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGI 160 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I AI + +G LY G+ ++RDW + +D+VR Sbjct: 161 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQ 220 Query: 234 YLVLKK 239 +++L++ Sbjct: 221 WMMLQQ 226 >gi|227494942|ref|ZP_03925258.1| UDP-glucose 4-epimerase [Actinomyces coleocanis DSM 15436] gi|226831394|gb|EEH63777.1| UDP-glucose 4-epimerase [Actinomyces coleocanis DSM 15436] Length = 328 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 41/325 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IG+ + R L+ + +VLV+D L+Y + I +S L Sbjct: 1 MSIMVIGGAGYIGAHVVR-LLQERNDEVLVVDDLSY----GTSDRIGESPLLVCDVAQTD 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E + +A++E A+++FAA V S++ + NI G ++ L+ Sbjct: 56 SVEILANAMREHGVTAVIHFAARKQVGESVMKPAWYYQQNIGGLANVM---------LAM 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL----AWGHTYG 176 + + + S+ VYG + SED+ +P +PY TK ++++ AWG + Sbjct: 107 EIAGVNQMIFSSSAAVYGMPPVEVVSEDIEKHPINPYGETKLIGEWMMADCERAWGLRWV 166 Query: 177 IPVLLSNCSNNYGPYHFPEK--LIPLAITRMIEGSHVFLYG------DGQNVRDWLYVED 228 + + + P LIP+ R+ +G + ++G DG +RD+++V D Sbjct: 167 GLRYFNVAGSGWDDLGDPATLNLIPMIFDRLAKGENPKIFGTDYPTPDGTCIRDYIHVHD 226 Query: 229 HVRALYLVLKKGRIGE-----RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 A L K GE +YN+G +IV DA+ + S + + Sbjct: 227 LAVAHIAALDKLASGEEMKYHQYNVGTGKGTSVKEIV-------DAV--RKSSGVDFVAD 277 Query: 284 IEDRPGHDRRYAI-DSSKIKSEIGW 307 EDR D I D+++I+ ++GW Sbjct: 278 EEDRRAGDPPQLIGDATRIQEDLGW 302 >gi|326775916|ref|ZP_08235181.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] gi|326656249|gb|EGE41095.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] Length = 336 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 48/356 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IGS + R + + V V D L+ ++ F+ Sbjct: 1 MTWLITGGAGYIGSHVVRAMTAAGE-TVAVYDDLSTGDRERVPDDVP------FVHGSTL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R +++ +V+ AA+ V S+ + N+ G +LLE + Sbjct: 54 DAVGLRRVMRDLSVRGVVHLAAKKQVAESVERPLHYYRENVEGLRVLLE---------AA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG D L +ED P P +PY TK + ++LV + G +G+ Sbjct: 105 ADSGVGSFLFSSSAAVYGMPDVALVTEDTPCAPINPYGETKLAGEWLVCSVGRAHGMATA 164 Query: 181 ---LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N + P H + L+P+ ++ +G+ ++G DG VRD+++V+ Sbjct: 165 SLRYFNVAGAAAP-HLADAGVFNLVPMVFEKLSQGAAPVVFGTDYDTADGTCVRDFIHVD 223 Query: 228 D-----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D A LV + NIG G + R+ I ++ E+ A P S Sbjct: 224 DIASAHLAAARALVGRGPGSDLTVNIGRGQGVSVREMIALIGEVTGYGSAAEPVSAPR-- 281 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT-VCWYLDNNWWWRPL 334 RPG R + I+ E+ W ++ + W L + WR L Sbjct: 282 -------RPGDPARVVASADLIREELDWSASHDVRQMVESAWAGWCLRHPAAWRDL 330 >gi|307340830|gb|ADN43888.1| Gmd [Escherichia coli] Length = 373 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q ++ F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTGNSKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|199599086|ref|ZP_03212492.1| Nucleoside-diphosphate-sugar epimerase [Lactobacillus rhamnosus HN001] gi|258509000|ref|YP_003171751.1| NAD-dependent epimerase/dehydratase [Lactobacillus rhamnosus GG] gi|199590049|gb|EDY98149.1| Nucleoside-diphosphate-sugar epimerase [Lactobacillus rhamnosus HN001] gi|257148927|emb|CAR87900.1| NAD-dependent epimerase/dehydratase [Lactobacillus rhamnosus GG] gi|259650293|dbj|BAI42455.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus GG] Length = 311 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 17/235 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIGS L L+ D + ++D L+ N I S+ +F + I D Sbjct: 5 LVTGGAGFIGSNLTELLLTDPDNTITIVDDLSMGLRTN----IPDSSRITFYEHSITDHA 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL-WWSCLSQDK 122 + L E + D IV AA + V S+ T + +E L L K Sbjct: 61 FMSQLLMEGRFDYIVLLAAIASVADSV--------ERPYATHQVNQEANLNIIETLRTQK 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + S+ VYG + EDM P + Y+ K +++ VL +G Y +P++ + Sbjct: 113 IPYKKLFFASSAAVYGDSPELPKKEDMAVKPLTQYAVDKFATERAVLNYGRLYDMPMVCT 172 Query: 183 NCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 N YGP P+ ++ + + + E +GDG+ RD++YV D V A+ Sbjct: 173 RFFNVYGPKQNPKSPYSGVLSIMMAALQEDKPFTFFGDGEQTRDFIYVGDVVHAI 227 >gi|326775284|ref|ZP_08234549.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] gi|326655617|gb|EGE40463.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] Length = 325 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 68/343 (19%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IG+ + R +V + +V+V+D S + L D+ Sbjct: 1 MTWLITGGAGYIGAHVARAMVAAGE-RVVVLDD-------------GSSGIADRLPGDVT 46 Query: 61 -------DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DR + L E +V+ AA+ V S+ + N+ G +LLE Sbjct: 47 PVTGSTSDRALLDRVLAEHAVGGVVHLAAKKQVGESVEKPLLYYRENVAGLAVLLE---- 102 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + ++ + RFL S+ VYG D L +E+ P P +PY TK + ++LV A G Sbjct: 103 --AVVAAGVR---RFLFSSSAAVYGVPDVDLITEETPCLPINPYGETKLAGEWLVRATGK 157 Query: 174 TYGIPVLLSNCSN--NYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQ 218 +G L + C N PE ++P+ R+ G ++G DG Sbjct: 158 AHG---LSTACLRYFNVAGAAAPELADTGVFNIVPMMFERLTRGEAPRIFGDDYPTPDGT 214 Query: 219 NVRDWLYVEDHVRALYLVLKK----GRIGERYNIG---GNNERKNIDIVFEIGFLLDALI 271 VRD+++V D A V ++ G N+G G + R+ D++ E+ Sbjct: 215 CVRDYIHVADLAEAHLAVARRLDGAGAGDLTLNVGRGEGVSVREMADVIREV-------- 266 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDS-SKIKSEIGWFPQENM 313 + + + +E R D A+ S ++I E+GW + + Sbjct: 267 ----TGSAVKPVVEPRRAGDAPKAVASAARIAGEVGWTARRGV 305 >gi|160889676|ref|ZP_02070679.1| hypothetical protein BACUNI_02103 [Bacteroides uniformis ATCC 8492] gi|156860668|gb|EDO54099.1| hypothetical protein BACUNI_02103 [Bacteroides uniformis ATCC 8492] Length = 369 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 52/301 (17%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + +++ QPD I N AA+SHV S + + + Sbjct: 54 VRDMKKNRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 113 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 114 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 167 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 168 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGYQDKLYLGNL 226 Query: 218 QNVRDWLYVEDHVRALYLVL--------------------------KKGRIGERYNIGGN 251 ++RDW Y +D+V ++L+L K+ + R+ G Sbjct: 227 NSLRDWGYAKDYVECMWLILQHDTPEDFVIATGEYHTVRDFTTLAFKETGVELRWEGEGV 286 Query: 252 NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQE 311 NE K ID + G +L + PK + RP + D +K K+ +GW P++ Sbjct: 287 NE-KGIDT--KTGKVLVEVDPKYF-----------RPAEVEQLLGDPTKAKTLLGWNPRK 332 Query: 312 N 312 Sbjct: 333 T 333 >gi|161620605|ref|YP_001594491.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] gi|254691095|ref|ZP_05154349.1| NAD-dependent epimerase/dehydratase family protein [Brucella abortus bv. 6 str. 870] gi|254695598|ref|ZP_05157426.1| NAD-dependent epimerase/dehydratase family protein [Brucella abortus bv. 3 str. Tulya] gi|254699786|ref|ZP_05161614.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis bv. 5 str. 513] gi|254702920|ref|ZP_05164748.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis bv. 3 str. 686] gi|254705958|ref|ZP_05167786.1| NAD-dependent epimerase/dehydratase family protein [Brucella pinnipedialis M163/99/10] gi|254711742|ref|ZP_05173553.1| NAD-dependent epimerase/dehydratase family protein [Brucella pinnipedialis B2/94] gi|256029626|ref|ZP_05443240.1| NAD-dependent epimerase/dehydratase family protein [Brucella pinnipedialis M292/94/1] gi|256157772|ref|ZP_05455690.1| NAD-dependent epimerase/dehydratase family protein [Brucella ceti M490/95/1] gi|256256281|ref|ZP_05461817.1| NAD-dependent epimerase/dehydratase family protein [Brucella abortus bv. 9 str. C68] gi|260167286|ref|ZP_05754097.1| NAD-dependent epimerase/dehydratase family protein [Brucella sp. F5/99] gi|161337416|gb|ABX63720.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] Length = 294 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 40/308 (12%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D + G + +++ + + FSF++ DI + +R D I N A + Sbjct: 1 MICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNTLDLRV-------DEIYNLACPASPP 52 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 + TN+IG+ LLE + + R Q ST EVYG E Sbjct: 53 HYQADPVHTMKTNVIGSLNLLELAAHYKA----------RIFQASTSEVYGDPHVHPQPE 102 Query: 148 DM-----PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPL 200 + + P S Y K S++ L + YG+ + + N YGP P+ +++ Sbjct: 103 NYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGVDIRIVRIFNTYGPRMRPDDGRVVSN 162 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LVLKKGRIGERYNIGGNNERKNIDI 259 I + ++G + +YGDG R + YV+D + + L+ I NIG E Sbjct: 163 FIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPVNIGNPGE------ 216 Query: 260 VFEIGFLLDALIPKSYSHTELIRF---IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 F +G L + +I + S + ++ + ++D R+ D + K E+GW P + G Sbjct: 217 -FTVGALAEQIIAMTGSRSRIVYYPLPVDD----PRQRRPDITVAKRELGWEPTVALAQG 271 Query: 317 LNKTVCWY 324 L T+ ++ Sbjct: 272 LEPTIAYF 279 >gi|114048168|ref|YP_738718.1| UDP-galactose 4-epimerase [Shewanella sp. MR-7] gi|113889610|gb|ABI43661.1| UDP-galactose 4-epimerase [Shewanella sp. MR-7] Length = 337 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ L+N +V+V+D L+ + LN ++ I+ ++ +F Q D Sbjct: 1 MTILVTGGAGYIGTHTVVELLN-AGSEVIVLDNLSNSSIEALNRVERITGKSV-TFFQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + DA+++FA V S+ ++ N+ GT IL + + Sbjct: 59 ILNKALLQKVFSDHNIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQ-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ K F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFKVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 Y PV ++ S G P P L+P I ++ G L +G DG Sbjct: 170 NIARLRYFNPV-GAHASGLIGEDPNDIPNNLMPF-IAQVAVGKREALSVFGNDYPTHDGT 227 Query: 219 NVRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D H++AL L K G + YN+G +D+V FE Sbjct: 228 GVRDYIHVVDLALGHLKALEKLATKPGLV--TYNLGTGQGYSVLDMVKAFE--------- 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + + RPG + K+++GW ++E N + W N Sbjct: 277 -KACGKSIAYQIAPRRPGDIAACYANPDHAKTDLGWQATHSLEDMANSSWHWQSTN 331 >gi|332029401|gb|EGI69355.1| UDP-glucuronic acid decarboxylase 1 [Acromyrmex echinatior] Length = 450 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 41/333 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGF+GS +LV+ L + +V+V+D N + N F + D Sbjct: 119 RILVTGGAGFVGS----HLVDRLMLAGHEVIVVDNFFTGRKRNVEHWVGHEN-FELVHHD 173 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I +R E D I + A+ + +L + I TN +GT + L Sbjct: 174 I-----VRPLYLEV--DEIYHLASPASPPHYMLNPVKTIKTNTLGTI----------NML 216 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG ++ +E P P + Y K ++ L A+ Sbjct: 217 GLAKRVGARVLIASTSEVYGDPNEHPQAETYWGHVNPIGPRACYDEGKRVAETLSYAYMR 276 Query: 174 TYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 G+ V ++ N +GP H + +++ I + ++ + +YG G+ R + YV D V Sbjct: 277 HEGVSVRVARIFNTFGPRMHMNDGRVVSNFIIQALQNESITIYGSGKQTRSFQYVSDLVD 336 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + L NI GN E + I+ + ++ +L+ + EL +ED P Sbjct: 337 GL-VALMASNYTLPVNI-GNPEEQTIE---KFARVIKSLVGATSEIVELA-AVEDDP--- 387 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D S+ K + W P+ + GL KT+ ++ Sbjct: 388 QRRRPDISRAKKYLNWEPKVPLAEGLKKTIVYF 420 >gi|325696624|gb|EGD38513.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK160] Length = 333 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 149/346 (43%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ K +V+V+D NL + + F + D+ Sbjct: 1 MAILVLGGAGYIGSHMVDRLIAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 54 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + C Sbjct: 55 DKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTSGMVSLLE---VMQECGV 111 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 ++ + ST YG ++ E P P +PY +K + ++ YGI Sbjct: 112 KN------IVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 165 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 166 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 224 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 225 YVHPFDLADAHILAVEHLRSGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 276 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 277 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 322 >gi|260770142|ref|ZP_05879075.1| UDP-glucose 4-epimerase [Vibrio furnissii CIP 102972] gi|260615480|gb|EEX40666.1| UDP-glucose 4-epimerase [Vibrio furnissii CIP 102972] gi|315182657|gb|ADT89570.1| UDP-glucose 4-epimerase [Vibrio furnissii NCTC 11218] Length = 338 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGG G+IGS C ++ + +++D L + A L +++++ F++ D Sbjct: 1 MNVLVTGGMGYIGSHTCIQMIA-AGMTPVILDNLYNSKASVLARIEKVAGVRP-QFIEGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +K + ++++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKALLVEVMKRYHIQSVIHFAGLKAVGESVQKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + S+ VYG +ED P + ++PY + KA+ D+ Sbjct: 113 ---EAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ S G P P L+P ++++ G FL +G D Sbjct: 170 SITLL--RYFNPV-GSHPSGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D H+ AL V +K + YN+G N +D+V + +P Sbjct: 226 GTGVRDYIHVMDLADGHIAALQKVGEKSGL-HIYNLGTGNGYSVLDMVKAFEIASNKAVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + +E RPG D K + E+GW +E T W N Sbjct: 285 --------YKLVERRPGDIAECWADPRKAQQELGWKATRTLEEMTQDTWRWQSHN 331 >gi|189022850|ref|YP_001932591.1| NAD-dependent epimerase/dehydratase [Brucella abortus S19] gi|254698880|ref|ZP_05160708.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|189021424|gb|ACD74145.1| NAD-dependent epimerase/dehydratase [Brucella abortus S19] Length = 294 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 40/308 (12%) Query: 28 VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVD 87 ++ +D + G + +++ + + FSF++ DI + +R D I N A + Sbjct: 1 MICVDNFS-TGRIENIRHLLNFDGFSFIRHDIVNTLDLRV-------DEIYNLACPASPP 52 Query: 88 RSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE 147 + TN+IG+ LLE + + R Q ST EVYG E Sbjct: 53 HYQADPVHTMKTNVIGSLNLLELAAHYKA----------RIFQASTSEVYGDPHVHPRPE 102 Query: 148 DM-----PYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPL 200 + + P S Y K S++ L + YG+ + + N YGP P+ +++ Sbjct: 103 NYWGNVNSFGPRSCYDEGKRSAETLFHDFHQQYGVDIRIVRIFNTYGPRMRPDDGRVVSN 162 Query: 201 AITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY-LVLKKGRIGERYNIGGNNERKNIDI 259 I + ++G + +YGDG R + YV+D + + L+ I NIG E Sbjct: 163 FIVQALKGEDITVYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPVNIGNPGE------ 216 Query: 260 VFEIGFLLDALIPKSYSHTELIRF---IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 F +G L + +I + S + ++ + ++D R+ D + K E+GW P + G Sbjct: 217 -FTVGALAEQIIAMTGSRSRIVYYPLPVDD----PRQRRPDITVAKRELGWEPTVALAQG 271 Query: 317 LNKTVCWY 324 L T+ ++ Sbjct: 272 LEPTIAYF 279 >gi|124026801|ref|YP_001015916.1| GDP-D-mannose dehydratase [Prochlorococcus marinus str. NATL1A] gi|123961869|gb|ABM76652.1| GDP-D-mannose dehydratase [Prochlorococcus marinus str. NATL1A] Length = 350 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 152/335 (45%), Gaps = 33/335 (9%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV---DI 59 ++TG G GS L L++ K+ LV + + N N L I S L++ D+ Sbjct: 8 LITGITGQDGSYLAELLLDKGYKVHGLV--RRSSQKNTNLLDNILNSQHNKNLELHYGDL 65 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I ++ QPD I N A+SHV S + T+ +G +LE R+ L Sbjct: 66 TQSTNILRIIENIQPDEIYNLGAQSHVQVSFETPEYTAQTDALGPLRILEAIRI----LQ 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 KK + Q ST E+YG + + +E P+ P SPY K + ++ + + +YGI Sbjct: 122 LTKKT--KIYQASTSELYGLVQETPQNERTPFYPRSPYGVAKLYAYWITINYRESYGIFA 179 Query: 178 --PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 +L ++ S G +F + I + + GS LY G+ ++RDW + +D+V + Sbjct: 180 CNGILFNHESPRRGE-NFVTRKITKGLCEINRGSTDCLYLGNIDSLRDWGHAKDYVEMQW 238 Query: 235 LVLKKGRIGERYNIGGNNE---RKNIDIVFEI---------GFLLDALIPKSYSHTELIR 282 ++L++ + E Y I + R+ +++ E G +D + + + +IR Sbjct: 239 MMLQQEK-PEDYVISTGKQTSVRRFVELCAEHLNWGGIIWEGKGIDEIGKRKDNKQVIIR 297 Query: 283 FIED--RPGHDRRYAIDSSKIKSEIGWFPQENMES 315 + RP DS K ++GW P+ N+ES Sbjct: 298 IDPNLFRPAEVNSLLGDSEKAYKKLGWKPKYNIES 332 >gi|28872687|ref|NP_795306.1| capsular polysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28855943|gb|AAO59001.1| capsular polysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 332 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 30/339 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG + ++L I+V+ ID L Y+ L + L + + F F + Sbjct: 1 MTVLVTGAAGFIGFHVAKHLCEQ-GIEVVGIDNLNDYYSVELKHSRLAILERMPGFVFKR 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI D + + + + +++ AA++ V S+ D +I +N++G +LE R Sbjct: 60 LDITDATGLSTLFEHNTFEQVIHLAAQAGVRYSMEQPDAYIQSNLVGFSNVLEACR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFS-EDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q + + S+ VYG+ + F ED P S Y+ATK +++ ++ H Y Sbjct: 116 ---QHRPSHL--IYASSSSVYGANTRLPFRVEDAVDRPLSLYAATKRANELAAYSYCHLY 170 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-LY 234 G+ YGP+ P+ + M+ V +Y G+ RD+ Y++D V + L Sbjct: 171 GLRATGLRFFTVYGPWGRPDMALFKFTQAMLREEPVDIYNHGEMARDFTYIDDIVESILR 230 Query: 235 LVLKKGRIG------ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 L L+ + +NIG K ++ V D L K+ R++ + Sbjct: 231 LRLRPPEPAGGEPAHQLFNIGRGQPVKLLEFV-------DCL-EKALGLKAQRRYLPLQA 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G + D + + I + P +++SG++ V WY ++ Sbjct: 283 GDVLQTWADVTALARWIDFQPHVSVDSGVSAFVEWYREH 321 >gi|325854399|ref|ZP_08171598.1| GDP-mannose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] gi|325484193|gb|EGC87127.1| GDP-mannose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] Length = 380 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 30/278 (10%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F D+ D I + + +PD I N AA+SHV S + + +G +LE Sbjct: 70 FHLHYADLSDSMSILGVIGKVRPDEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRILEAV 129 Query: 112 R---LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 R + +C R Q ST E+YG +++ +E+ P++P SPY+ K ++V Sbjct: 130 RQLGMAATC---------RIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWIV 180 Query: 169 LAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDW 223 + Y + +L ++ S G F + I LA R+ +G LY G+ ++RDW Sbjct: 181 REYREAYNMYCCSGILFNHESERRGE-TFVTRKITLAAARIKQGKQDKLYLGNLSSLRDW 239 Query: 224 LYVEDHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 Y +D+V ++L+L++ + G ++++ + EI F + + K Sbjct: 240 GYAKDYVECMWLILQQDKPEDFVIATGVQHSVREFCYHAFKRVGIEIEFTGEGMEEKGID 299 Query: 277 HTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGWFP 309 IE P R + D +K K+++GW P Sbjct: 300 KATGNVLIEVSPDFYRPTDVVNLWGDPTKAKAKLGWNP 337 >gi|296328346|ref|ZP_06870873.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154525|gb|EFG95315.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 142/329 (43%), Gaps = 43/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVVDSLI-TGHIDAVDEKAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 NNVDKIVFS--STAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L + R G + +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRNGGDSQIFNL-GNGEGFSVKEVIEV-------TRKVTGHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K E+ W P+ Sbjct: 277 EVSPRRAGDPARLIASSKKAIDELKWKPK 305 >gi|295687950|ref|YP_003591643.1| GDP-mannose 4,6-dehydratase [Caulobacter segnis ATCC 21756] gi|295429853|gb|ADG09025.1| GDP-mannose 4,6-dehydratase [Caulobacter segnis ATCC 21756] Length = 358 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +++ QPD I N AA+SHV S + + GT LLE R+ Sbjct: 69 DMTDSTNLIRIVQQTQPDEIYNLAAQSHVQVSFETPEYTSNADGTGTLRLLEAIRI---- 124 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK +F Q ST E+YG + + SE P+ P SPY+A K S ++V+ + YGI Sbjct: 125 LGLEKKT--KFYQASTSELYGLVQEVPQSEKTPFYPRSPYAAAKLYSYWIVVNYREAYGI 182 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ + +G LY G+ RDW + ++VR + Sbjct: 183 HASNGILFNHESPLRGETFVTRKITRAVAAIKQGFQDKLYLGNLDAKRDWGHAREYVRGM 242 Query: 234 YLVLKK 239 +L+L++ Sbjct: 243 WLMLQQ 248 >gi|195440368|ref|XP_002068014.1| GK11988 [Drosophila willistoni] gi|194164099|gb|EDW79000.1| GK11988 [Drosophila willistoni] Length = 447 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 45/335 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQ---VLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R+++TGGAGF+GS +LV+DL IQ ++V+D N + N F + D Sbjct: 118 RILITGGAGFVGS----HLVDDLMIQGHEIIVVDNFFTGRKRNVEHWLGHEN-FELIHHD 172 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + I + D I + A+ + + + I TN +GT + L Sbjct: 173 IVNPLFI-------EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTI----------NVL 215 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NPSSP---YSATKASSDYLVLAW 171 K+ + L ST EVYG D + + Y NP P Y K S+ L A+ Sbjct: 216 GLAKRVMAKVLIASTSEVYG--DPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAY 273 Query: 172 GHTYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + V ++ N YGP H + +++ I + + + +YG+G+ R + YV D Sbjct: 274 AKQEKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDL 333 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 V + + L + N+G E+ + E ++ L+ S + + +ED P Sbjct: 334 VDGM-IALMASNYTQPVNLGNPVEQS----IEEFAQIIKQLV-GGPSEIKQTKAMEDDP- 386 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D ++ K+ + W P+ +E+GL KT+ ++ Sbjct: 387 --QRRKPDITRAKTLLKWEPKVPLETGLMKTISYF 419 >gi|163849704|ref|YP_001637747.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163661309|gb|ABY28676.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 370 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 43/357 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG L L+ +V V+D L + + + +S F++ D+ D E Sbjct: 6 LITGGAGFIGRHLASALLAR-GYRVRVLDSLIEQVHGGTGQPLSLDPAVEFVEGDVRDAE 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLE-------ETRLWWS 116 + A+ +V+ AAE V +S+ + +++ N GT L + + + S Sbjct: 65 AVARAIAGA--THVVHLAAEVGVGQSMYAVERYVSVNDCGTATLFQALIEAPVQRVVVAS 122 Query: 117 CLSQDKKDQFRFLQIST--DEVYGSLDKGLF-----SEDMPYNP-----------SSPYS 158 +S + +R +T D V G + P P +S Y+ Sbjct: 123 SMSIYGEGLYRTEADATVEDAVRPPRRSGEPWDPPDQQGRPMRPVPTPESKRPALASVYA 182 Query: 159 ATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---P-EKLIPLAITRMIEGSHVFLY 214 TK + L L YG+ + N YGP P ++ + R++ G ++ Sbjct: 183 LTKYMQERLTLTLAPAYGMEGVALRLWNVYGPGQALSNPYTGVLAIFAARLLHGQPPVIF 242 Query: 215 GDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 DG+ RD+++VED +A L L+ G+ YN+G +R V E+ LL + Sbjct: 243 EDGEQRRDFVHVEDVAQAFVLALEHPAAAGQVYNVGSGEDR----TVNEVARLLA----R 294 Query: 274 SYSHTELIRFI--EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 + E+ + + R G R D KI E+G+ P+ + GL + W + Sbjct: 295 AMGREEIAPQVTGQARAGDLRHCIADIGKITRELGYAPKRDFAEGLAELAAWVAEQQ 351 >gi|89095728|ref|ZP_01168622.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] gi|89089474|gb|EAR68581.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] Length = 334 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/330 (23%), Positives = 152/330 (46%), Gaps = 44/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M+++VTGGAG+IGS C L+ V+++D L+ + ++ ++ IS+ + +F+Q D Sbjct: 2 MKVLVTGGAGYIGSHTCVELLAS-GYDVVIVDNLSNSSRNVIDRIERISKRKV-TFIQAD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + +++ ++ +++FA V S+ + N++ T +L++ L+ Sbjct: 60 VTIEPVVQALFEQHDFVGVIHFAGYKAVGESVQQPVMYYQNNLVSTMLLVKYCALYGVN- 118 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-PYSATKASSDYLVLAWGHT--- 174 +F+ S+ VYG ++ F E +P P++ PY TKA S+ ++ + Sbjct: 119 --------KFVFSSSATVYGD-NQVPFHEGLPLLPTTNPYGETKAMSERILTDVANVTPD 169 Query: 175 YGIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGSH--VFLYG------DGQ 218 +G+ +L ++ S G P P L+P +T++ +G + ++G DG Sbjct: 170 FGVSILRYFNPVGAHESGEIGEAPNGIPNNLMPF-VTQVAKGKREKLMVFGNDYNTVDGT 228 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIG-ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 VRD+++V D + L+K G YN+G +++V IP Sbjct: 229 GVRDYIHVVDLAKGHVAALEKLTPGVHVYNLGTGKGTSVLELVHAFEEATGVAIP----- 283 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 ++ RPG D +K + E+GW Sbjct: 284 ---YEIVDRRPGDIAECYADVTKAERELGW 310 >gi|309798612|ref|ZP_07692885.1| UDP-glucose 4-epimerase [Streptococcus infantis SK1302] gi|308117754|gb|EFO55157.1| UDP-glucose 4-epimerase [Streptococcus infantis SK1302] Length = 339 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 52/334 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVDI 59 +++VTGGAGFIG+ LV QV+V+D L + +L ++ I+ + F +VDI Sbjct: 4 KILVTGGAGFIGTHTVIELVQ-AGHQVVVVDNLVNSSRKSLEVVERITGVEI-PFYEVDI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKHEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDYL 167 ++ + + S+ VYG ED P + ++PY T KA S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSATNPYGRTKLMLEEILTDIHKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG------DG 217 V+ Y P+ ++ S + G P P L+P +T++ G V ++G DG Sbjct: 173 VVLL--RYFNPI-GAHESGDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDG 228 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPK 273 VRD+++V D HV AL L+KG YN+G ++I+ + + IP Sbjct: 229 TGVRDYIHVVDLAKGHVAALKK-LQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGRPIP- 286 Query: 274 SYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 R +E RPG D +K K E+GW Sbjct: 287 -------YRIVERRPGDIAACYSDPAKAKEELGW 313 >gi|300175160|emb|CBK20471.2| unnamed protein product [Blastocystis hominis] Length = 380 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVND-LKIQVLVIDKLTY-AGNLNSL-KEISQSNLFSFLQV-DI 59 ++TG G GS L L++ ++ ++ ++ G +N L K+ + FL D+ Sbjct: 15 LITGITGQDGSYLAELLLSKGYEVHGIIRRSSSFNTGRINHLYKDPHNQGVRFFLHYGDL 74 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + + + QPD I N A+SHV S ++ + IGT LL R +C Sbjct: 75 TDSSNLCGLMAKIQPDEIYNLGAQSHVKVSFDLSEYSAEVDGIGTLRLLNAIR---TCGL 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI-- 177 + K R Q ST E+YG + +E P+ P SPYS K S ++V+ + YG+ Sbjct: 132 EKKT---RLYQASTSELYGKVQAIPQNEKTPFYPRSPYSVAKQFSYWIVVNYREAYGMFL 188 Query: 178 --PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 +L ++ S GP F + I A+ R+ G LY G+ +RDW + D+V ++ Sbjct: 189 SNGILFNHESPRRGPT-FVTRKITRAVVRIKLGVQDCLYLGNLNAIRDWGHARDYVYGMW 247 Query: 235 LVLKK 239 L+L++ Sbjct: 248 LILQQ 252 >gi|29828781|ref|NP_823415.1| UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] gi|29605886|dbj|BAC69950.1| putative UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] Length = 328 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 51/330 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAGFIG+ + R ++ + +V V D L+ G+ E F++ Sbjct: 1 MTWLITGGAGFIGAHVVRTMLEAGE-RVAVYDDLS-TGDPGRTPE-----GVPFVKGSTL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R L + +V+ AA+ V S+ + N+ G LL+ + Sbjct: 54 DGGLLRRTLADLHITGVVHLAAKKQVAESVERPLYYYRENVHGLETLLD---------AA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + FL S+ VYG D + +ED P P +PY TK + ++LV A G +G+ Sbjct: 105 AETGVRNFLFSSSAAVYGMPDVKVVTEDTPCAPINPYGETKLAGEWLVRAAGRAHGMTTA 164 Query: 181 LSNCSNNYGPYHFPEK--------LIPLAITRMIEGSHVFLYG------DGQNVRDWLYV 226 N G E+ LIP+ ++ +G+ ++G DG VRD+++V Sbjct: 165 SLRYFNVAGAAD--ERLADTGVFNLIPMVFEKLTQGTAPVIFGDDYDTEDGTCVRDFIHV 222 Query: 227 ED-----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEI-GFLLDALIPKSYSH 277 ED A L ++ NIG G + R+ I+++ E+ G+ DA P S + Sbjct: 223 EDIASAHLAAARALTGREPGSDLTVNIGRGEGVSVREMIELIGEVTGYGADA-APVSAAR 281 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEIGW 307 RPG R + +I++E+GW Sbjct: 282 ---------RPGDPARVVAAADRIQAELGW 302 >gi|149369799|ref|ZP_01889650.1| 3-beta hydroxysteroid dehydrogenase/isomerase [unidentified eubacterium SCB49] gi|149356290|gb|EDM44846.1| 3-beta hydroxysteroid dehydrogenase/isomerase [unidentified eubacterium SCB49] Length = 322 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 42/337 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSL-KEISQSNLFSFLQV 57 ++++VTG AGFIGS C L + L +V+ ID + Y L L EI ++ + ++ Sbjct: 10 LKILVTGAAGFIGSHACERLAS-LGHEVIGIDNFSSYYDVALKELNAEILKNKNITIHRI 68 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +E AI +FAA+ + + E+ + N++ T +L+ Sbjct: 69 DLRDDDLTGIITEEI--GAIFHFAAQPGISAACT-FKEYFSNNVLATQRILD-------- 117 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW---GHT 174 + + + + F+ I+T +YG L+ L + P P+S Y TK +++ LVL++ G Sbjct: 118 VIETLEVKPYFVNIATSSIYG-LEATLTENEAPL-PASWYGVTKLAAEQLVLSYSRRGLL 175 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIE-----GSHVFLYGDGQNVRDWLYVEDH 229 G + L + YGP P+KL TR+I+ S G +++R + YV+D Sbjct: 176 KGTSLRLYSV---YGPRERPDKLY----TRLIDCGLNDKSFPLFKGSVKHLRSFTYVQDI 228 Query: 230 VRALYLVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 + + VL ++ GE +N+G E + + +L+ I I R Sbjct: 229 IDGIVSVLDNQEACDGEVFNLGTEKENTTQTGINTVEEILNTSIK--------IDQKPAR 280 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 PG R + +K + +G+ PQ ++ GL V W+ Sbjct: 281 PGDQSRTKANINKARRVLGYNPQTTLKEGLEAQVAWF 317 >gi|104781549|ref|YP_608047.1| UDP-glucose 4-epimerase [Pseudomonas entomophila L48] gi|95110536|emb|CAK15244.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Pseudomonas entomophila L48] Length = 320 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 146/353 (41%), Gaps = 58/353 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS + ++L+ QV+V D ++ ++Q+DI Sbjct: 1 MNFLVVGGAGYIGSHMVKHLLW-ANHQVVVADTAPTRPGIH------------WVQLDIA 47 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + L E++ DA+ +FA+ V S+ ++ N+ T LL+ + + Sbjct: 48 NVHALDTLLAEYRFDAVFHFASYIQVGESVADPGKYYQNNVAATLTLLQ-------AMVR 100 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST VYG E+ P P +PY +K + L+ + YG+ + Sbjct: 101 AGIDKLVF--SSTAAVYGDPVATPIDEEHPKAPINPYGRSKWMVEQLLADFDRAYGLRSV 158 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRDW 223 ++ G H PE LIPL I + G + +YG DG +RD+ Sbjct: 159 CLRYFNAAGADPEGQLGECHDPETHLIPL-ILQAAAGRRPAITVYGRDYDTPDGTCIRDY 217 Query: 224 LYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D A L L G +N+G GF + +I + T Sbjct: 218 VHVADLASAHALAVDYLVAGGASTAFNLGNGQ-----------GFSVQQVIDAARHVTGR 266 Query: 281 IRFIED---RPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNW 329 I D RPG R D+ K + +GW PQ +++E + W L W Sbjct: 267 PIDISDAPRRPGDPPRLVADAGKARQVLGWTPQFDSLEQIVAHAWRWELKYPW 319 >gi|292492406|ref|YP_003527845.1| UDP-glucose 4-epimerase [Nitrosococcus halophilus Nc4] gi|291581001|gb|ADE15458.1| UDP-glucose 4-epimerase [Nitrosococcus halophilus Nc4] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 71/354 (20%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA---GNLNSLKEISQSNLFSFLQVDI 59 ++VTGGAG+IGS + + L + +V+V+D L+ +N+ I + Sbjct: 6 ILVTGGAGYIGSHVVQQL-TAMSHRVVVLDNLSTGFADAVINADLVIGNTK--------- 55 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D E +RS LKE+Q D +++FAA + V S+ ++ N T LLE C + Sbjct: 56 -DSELVRSLLKEYQVDTVMHFAAHTVVPESVANPLKYYANNTCHTRNLLE------CCTA 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-------------Y 166 K F+ ST YG+ L +ED P P +PY +K S+ Y Sbjct: 109 AGVK---YFIFSSTAATYGTPSTPLVTEDTPTAPINPYGTSKLMSEWMLRDLSQASNLNY 165 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS--HVFLYG------DGQ 218 ++L + + G S+ + G L+ G V ++G DG Sbjct: 166 VILRYFNVAG-----SDPTGRIGQSTREATLLIKVACEAAVGKRDQVSIFGTDYPTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIP 272 +RD+++VED +A L LK+G N G G + R+ +D V + Sbjct: 221 GIRDYIHVEDLAKAHILALDYLKQGNQSTILNCGYGHGYSVREVLDAVQRV--------- 271 Query: 273 KSYSHTELIRFIE--DRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCW 323 H ++ ++ RPG R + +I+ +GW PQ +N++ + ++ W Sbjct: 272 ----HGRPLKVVKCARRPGDPPRLIAAAEQIRGVLGWQPQYDNLDFIVKTSLDW 321 >gi|218887780|ref|YP_002437101.1| GDP-mannose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758734|gb|ACL09633.1| GDP-mannose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 401 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G G+ L R+L+ D +V I + + N + I Q F Sbjct: 3 KALITGITGQDGAYLARFLL-DKGYEVHGIKRRSSLFNTQRVDAIYQGVHARDKRFFLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D I +++ QPD I N A+SHV S + + +GT +LE RL Sbjct: 62 GDLTDSTNIIRLVQDIQPDEIYNLGAQSHVQVSFAAPEYTADVDALGTLRVLEAVRL--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK R Q ST E+YG + + E P+ P SPY+ K + ++ + + Y Sbjct: 119 -LGLEKKT--RIYQASTSELYGLVQEVPQRETTPFYPRSPYACAKLYAYWITVNYREAYD 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + + A+ R+I G LY G+ +RDW + D+VR Sbjct: 176 MYACNGILFNHESPLRGETFVTRKVTRALPRIILGMDDCLYMGNVNALRDWGHARDYVRM 235 Query: 233 LYLVLKK 239 ++L+L++ Sbjct: 236 MWLMLQQ 242 >gi|150399168|ref|YP_001322935.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] gi|150011871|gb|ABR54323.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] Length = 292 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 46/326 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS + L+ + V ++D NL++ E + +N F+ DI Sbjct: 1 MKILVTGGAGFIGSHIVDLLIENGH-DVTILD------NLSTGNEKNINNSAKFINGDIL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + +++ AA+ +V S+ NI+GT +LE+ + + Sbjct: 54 DKNLDLTGF-----ECVIHEAAQINVRTSVEDPILDANINILGTINILEKMKEYGV---- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 KK F S VYG E NP SPY +K ++ + + Y I Sbjct: 105 -KKIIFSS---SGGAVYGEPKYLPVDEKHDVNPLSPYGLSKFCAEEYIKLYNRLYNIEYC 160 Query: 181 LSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YG P +I + I +M +G +YG+G RD++ V+D +A + L Sbjct: 161 ILRYSNVYGKRQDPLGEAGVISIFIDKMKKGESPIIYGNGNQTRDFVNVKDVSKANLMAL 220 Query: 238 K-KGRIGERYNIGGNNERKNIDIVF-----EIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 K I NIG E +++ +F E+GF + + K +R G Sbjct: 221 NWKNEI---VNIGSGKET-SVNELFKIISSEVGFDKNPIYEK------------ERDGEV 264 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R ID + KS +GW P+ M++G+ Sbjct: 265 YRIYIDYNYAKS-LGWIPEVEMDNGI 289 >gi|327469498|gb|EGF14967.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK330] Length = 347 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 46/346 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV K +V+V+D NL + + F + D+ Sbjct: 15 MAILVLGGAGYIGSHMVDRLVAAGKEEVVVVD------NLVTGHRAAVHPQAVFYEGDLA 68 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D++ +R K DA+++FAA S V S+ ++ N G LLE + + Sbjct: 69 DKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQEYGV--- 125 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K F ST YG ++ E P P +PY +K + ++ YGI Sbjct: 126 --KNIVFS----STAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKF 179 Query: 179 -------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVRD 222 V + + G H PE L+P+ + ++ +G + ++G DG NVRD Sbjct: 180 VALRYFNVAGAKPDGSIGEDHGPETHLLPI-VLQVAQGKREKIAVFGDDYDTPDGTNVRD 238 Query: 223 WLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 +++ D A L L+ G + +N+G + N+ IV K H Sbjct: 239 YVHPFDLADAHILAVEHLRSGHPSDAFNLGSSTGFSNLQIV--------EAARKVTGHPI 290 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + E RPG S K ++ +GW P+ +N+E+ + W+ Sbjct: 291 PLEIAERRPGDPDTLIASSEKARNVLGWQPKFDNIETIIETAWKWH 336 >gi|90579217|ref|ZP_01235027.1| GDP-D-mannose dehydratase [Vibrio angustum S14] gi|90440050|gb|EAS65231.1| GDP-D-mannose dehydratase [Vibrio angustum S14] Length = 368 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 34/284 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +KE QPD I N A SHV S + + +GT LLE R+ Sbjct: 59 DLTDSSNLIRLVKEIQPDEIYNLGAMSHVAVSFESPEYAADVDAMGTIRLLEAIRI---- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +++ RF Q ST E+YG + + E P++P SPY+ K + ++ + + +YG+ Sbjct: 115 --NGLEEKTRFYQASTSELYGEVQEIPQRETTPFHPRSPYAVAKMYAYWITVNYRESYGM 172 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMI----EGSHVFLY-GDGQNVRDWLYVEDHVRA 232 N+ P E + ITR + +G LY G+ +RDW + +D+VR Sbjct: 173 YACNGILFNHESPRR-GETFVTRKITRTVANISQGLESCLYLGNMDALRDWGHAKDYVRM 231 Query: 233 LYLVLKK-----------GRIGERYNIGGNNERKNIDIVF------EIGFL--LDALIPK 273 +++L++ +I R + + + ID+ F EI + +D+ Sbjct: 232 QWMMLQQEVADDFVIATGKQISVREFVRMSAKEAGIDLEFTGKGVDEIATVTAVDSEKAP 291 Query: 274 SYSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENME 314 S + ++I + RP D SK K ++GW P+ +E Sbjct: 292 SVNVGDVIVRVSPKFFRPAEVETLLGDPSKAKEKLGWTPEITVE 335 >gi|77919845|ref|YP_357660.1| nucleoside-diphosphate sugar epimerase [Pelobacter carbinolicus DSM 2380] gi|77545928|gb|ABA89490.1| nucleoside-diphosphate-sugar epimerase [Pelobacter carbinolicus DSM 2380] Length = 322 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 40/333 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++ GGAGF+G+ L R L+ D +V+ +D L+ G+ ++++++ S F F++ DI D Sbjct: 3 RILIAGGAGFLGANLSRRLLKD-NNEVVCLDNLS-TGHYQNIRDLTPSPRFEFIKADIVD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 D + N A + + A + I +G LLE TR Sbjct: 61 P-------INLSFDKVFNLACPASPPQYQRLALQTIDACTLGVRNLLEATR--------- 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAWGHT 174 ++ R L ST EVYG D + + Y + + Y K ++ L + H Sbjct: 105 -RNNARMLHASTSEVYG--DPEIHPQIESYRGNVGTLTDRACYDEGKRLAETLCYEY-HK 160 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G V ++ N YGP+ + +++ + + +YGDG R + YV D V A Sbjct: 161 RGCAVRIARLFNTYGPFMDQDDGRVVSNFTISALTEQPLTIYGDGSQTRSFCYVSDTVEA 220 Query: 233 LYLVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + G YN+G E + +D+ I L + P + H+ + + Sbjct: 221 LLRFMDLAGDNLPVYNLGNPREVRIVDLAHSILQLTGSNAPMHF-HS-----LPEADPKK 274 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ I + + W P+ ++ESGL +T+ ++ Sbjct: 275 RKPCI--KRAHQTMNWLPRVSLESGLLQTIDYF 305 >gi|310780461|ref|YP_003968793.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] gi|309749784|gb|ADO84445.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] Length = 361 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 22/249 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV------ 57 ++TG G GS L +L+ +V I + + + N ++ + +L +++ Sbjct: 7 LITGITGQDGSFLAEFLLEK-GYEVHGIIRRSSSFNTGRIEHLYMDDLIEDMKLPRKINL 65 Query: 58 ---DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D + +++ QPD I N AA+SHV S + T+ IGT +LE RL Sbjct: 66 HYGDMTDSSNLIRLIQKIQPDEIYNLAAQSHVKVSFDMPEYTADTDGIGTLRILEAVRL- 124 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L +KK R Q ST E+YG + + E P+ P SPY K ++ + + Sbjct: 125 ---LGMEKKT--RIYQASTSELYGKVQEVPQKETTPFYPRSPYGVAKLYGFWITKNYRES 179 Query: 175 YGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDH 229 Y + +L ++ S G F + I LA R+ +G +Y G+ RDW Y +D+ Sbjct: 180 YDMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGKQKKIYLGNLDAKRDWGYAKDY 238 Query: 230 VRALYLVLK 238 V ++L+L+ Sbjct: 239 VECMWLMLQ 247 >gi|228918802|ref|ZP_04082200.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228840874|gb|EEM86118.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 300 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 36/310 (11%) Query: 25 KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAES 84 K +V ++D L + N + NL +Q DI D++ + + D + AA Sbjct: 4 KHEVWILDNLANSTTANITEFAHDLNLKQCIQGDIKDKKLVAQLFENNSFDLCYHLAASI 63 Query: 85 HVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGL 144 +V SI A + IGTF LLE+ K + + +ST VY DK Sbjct: 64 NVQDSIDDARTTFENDTIGTFNLLEQCH----------KHNVKMVFMSTCMVY---DKAT 110 Query: 145 ----FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKL 197 SE P P+SPY+ +K +++ +VL++ + Y +PV++ N YGP+ + Sbjct: 111 NIQGISELDPIKPASPYAGSKIAAENMVLSYYYAYKLPVVVIRPFNTYGPFQKTGGEGGV 170 Query: 198 IPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH----VRALYLVLKKGRIGERYNIGGNNE 253 + + I ++ + +YGDG+ RD LYVED V A Y G I G + Sbjct: 171 VAIFINNKLDNVPLNIYGDGKQTRDLLYVEDCADFVVAAGYSAKANGHIIN----AGTGQ 226 Query: 254 RKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENM 313 +I+ + E LI + + + I + ++ + K K+ + W P+ ++ Sbjct: 227 DISINKLAE-------LISGNKVSIQHVTHIHPQ-SEIQKLLCNYEKAKTILNWEPKVSL 278 Query: 314 ESGLNKTVCW 323 E G+ KT W Sbjct: 279 EDGVIKTEEW 288 >gi|218264191|ref|ZP_03478075.1| hypothetical protein PRABACTJOHN_03765 [Parabacteroides johnsonii DSM 18315] gi|218222237|gb|EEC94887.1| hypothetical protein PRABACTJOHN_03765 [Parabacteroides johnsonii DSM 18315] Length = 324 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/341 (26%), Positives = 160/341 (46%), Gaps = 34/341 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVDI 59 +++VTGGAGFIGS LC +L+ + +V+ +D + G++++++ + + F+ ++ DI Sbjct: 3 KILVTGGAGFIGSNLCEHLLEN-GYEVICLDNFS-TGHMSNIQHLLDNFPTHFTLIEGDI 60 Query: 60 CDRE-CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWS 116 + E CIR++ D+I++ AA + RSI D+ ITTN IG F+ + Sbjct: 61 RNLETCIRASKGV---DSILHEAALGSIPRSI---DDPITTNDVNIGGFLNM-------- 106 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 ++ + RF+ ++ YG + ED P SPY+ TK + + TYG Sbjct: 107 LVAAKDNNVKRFIFAASSSTYGDSTELPKVEDRIGKPLSPYALTKYVDELYAEVFAKTYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVED--HV 230 I + N +G P +IPL I + + + GDG N RD+ Y+++ H+ Sbjct: 167 IEYIGLRYFNVFGRRQDPNSTYAAVIPLFIKQYLNYQQPKINGDGLNTRDFTYIDNVIHM 226 Query: 231 RALYL-VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--R 287 L L + I + YN E+ I+ ++ L+ + + S+ I I R Sbjct: 227 NMLALNTVNPSSINQIYNTAC-GEQITIN---KLAHLIKTYLSQYDSYVSTIDPINGPYR 282 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 G K K +G+ P GL T+ WY++N+ Sbjct: 283 LGDIPHSFACIDKAKLLLGYKPLVLFREGLISTIEWYVNNH 323 >gi|218440329|ref|YP_002378658.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7424] gi|218173057|gb|ACK71790.1| GDP-mannose 4,6-dehydratase [Cyanothece sp. PCC 7424] Length = 360 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 21/324 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFL 55 R ++TG G GS L L+ +V I + T N + + + +++ LF Sbjct: 6 RALITGITGQDGSYLSELLLEK-GYEVHGIIRRTSTFNTDRIDHLYVDPHNTEARLFLHY 64 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D +R L++ QP I N A+SHV S + + + +GT +LE R + Sbjct: 65 G-DLTDGTTLRRILEQVQPIEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRILEAIRDY- 122 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + RF Q + E++G + + E P+ P SPY+ K + + L + +Y Sbjct: 123 ---QHRTGIKVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYAYWQTLNYRESY 179 Query: 176 GIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 I N+ P F + I AI R++ LY G+ RDW Y +D+V+ Sbjct: 180 EIFACNGILFNHESPRRGETFVTRKITRAIARIVAEQQKKLYLGNLDAQRDWGYAKDYVQ 239 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++L+L++ + + E ++ EI F + L + Y + R++ RP Sbjct: 240 AMWLMLQQDEPDD--YVVATGETHSVKEFLEIAFKVVNLDWQKYVEFDQ-RYL--RPAEV 294 Query: 292 RRYAIDSSKIKSEIGWFPQENMES 315 D +K K ++GW P E Sbjct: 295 DLLIGDPTKAKKKLGWQPSVTFEQ 318 >gi|29375648|ref|NP_814802.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257418903|ref|ZP_05595897.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|29343109|gb|AAO80872.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257160731|gb|EEU90691.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + Y + Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|120599516|ref|YP_964090.1| UDP-glucose 4-epimerase [Shewanella sp. W3-18-1] gi|120559609|gb|ABM25536.1| UDP-galactose 4-epimerase [Shewanella sp. W3-18-1] Length = 337 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 154/356 (43%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ L+ +V+V+D L+ + LN ++ I+ ++ +F Q D Sbjct: 1 MTILVTGGAGYIGTHTVVELLK-AGSEVIVLDNLSNSSIEALNRVERITGKSV-TFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + D++++FA V S+ ++ N+ GT +L + + Sbjct: 59 ILNKALLQKVFSDHAIDSVIHFAGLKAVGESVAKPLKYYENNVTGTLVLCQ-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ K F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFKVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--------SHVFLYGDGQ 218 Y PV ++ S G P P L+P I ++ G H + DG Sbjct: 170 NIARLRYFNPV-GAHSSGLIGEDPNDIPNNLMPF-IAQVAVGKRAVLSVFGHDYPTHDGT 227 Query: 219 NVRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D H++AL L ++ G + YN+G +D+V FE Sbjct: 228 GVRDYIHVVDLAKGHLKALEKLAIRPGLV--TYNLGTGQGYSVLDMVKAFE--------- 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ T + RPG D + K +GW +E N + W N Sbjct: 277 -KACGKTIAYQIAPRRPGDIAACYADPTHAKQSLGWHATHTLEDMANSSWHWQSTN 331 >gi|282901902|ref|ZP_06309804.1| NAD-dependent epimerase/dehydratase [Cylindrospermopsis raciborskii CS-505] gi|281193170|gb|EFA68165.1| NAD-dependent epimerase/dehydratase [Cylindrospermopsis raciborskii CS-505] Length = 352 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 47/336 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA------GNL--NSLKEISQSNLFS 53 +L+VTG +G IGS +C Y N ++ +D A G+ N + S + F+ Sbjct: 3 KLLVTGSSGLIGSEVCIYFANS-GWEIHGVDNNQRAIFFGPQGDTRWNQHRLQSSIDRFT 61 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 ++DI DR+ + + L + +PDAIV+ AA+ DR+ + TN +GT LLE R Sbjct: 62 HHELDIRDRQGVLNLLCDLRPDAIVHTAAQPSHDRAAAIPFDDFDTNAVGTLNLLEAARQ 121 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGL---------------FSEDMP------YN 152 + S + F+ +ST++VYG + + E +P + Sbjct: 122 FCS--------EVPFIHMSTNKVYGDAPNEIPLIELNTRWTYADPRYQEGIPETFRIDQS 173 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIEGS 209 S + A+K ++D +V +G + + GP H +L + + +EG Sbjct: 174 KHSLFGASKVAADVMVQEYGRYFNMNTCCLRGGCLTGPNHSGVELHGFLSYLVKCNLEGR 233 Query: 210 HVFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 ++G G+ VRD ++ D R + ++ R GE YN+GG R N + E ++ Sbjct: 234 VYNVFGYKGKQVRDNIHSLDVARFIDEFIRSPRSGEVYNLGGG--RNNTCSILEAFDMVS 291 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 +L K H E I ++R G Y D +K++++ Sbjct: 292 SLSGKPM-HYEYID--KNREGDHICYYSDLTKMQAD 324 >gi|123965996|ref|YP_001011077.1| CDP-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9515] gi|123200362|gb|ABM71970.1| CDP-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9515] Length = 360 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 33/340 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++I+TG GF GS L +L+ ++ + I + + NS+K + SN F +DI Sbjct: 13 KVIITGHTGFKGSWLLIWLITLGAEVYGISISEGEESNLFNSIKR-NISNKFDHKLIDIR 71 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + +A+ + +PD IV+ AA++ V S +TN++GT LLE Sbjct: 72 DLGKVSNAISQIKPDIIVHMAAQALVQESYKDPITTWSTNLMGTINLLESV--------S 123 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 K+ + ++TD+VY + + + E+ + PYSA+KA+++ + +W +Y Sbjct: 124 KIKNHCALVCVTTDKVYENKNWCYGYRENDNLGGADPYSASKAAAEIAIKSWRKSYCGEN 183 Query: 176 -----GIPVLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + + + N G + E +LIP R ++ + ++R W +V + Sbjct: 184 NFEISNLGIATARAGNVIGGGDYAENRLIP-DCYRAYVKENIIKVRNPNSIRPWQFVLEP 242 Query: 230 VRALYLV-----LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L+ L YN G NN+ V E+ + + SY+ + F Sbjct: 243 LYGYLLLAERLYLDPKNYSSEYNFGPNNDSN--KTVLEVVKHISSCWKVSYAVQQENDFF 300 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ +D SK K + W P + E LNKTV WY Sbjct: 301 QEA----NILNLDVSKSKQVLQWEPIWDFEQSLNKTVNWY 336 >gi|89070450|ref|ZP_01157747.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] gi|89043936|gb|EAR50122.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] Length = 373 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 16/249 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 + ++TG G GS L +L+ +V I + N + I + F Sbjct: 4 KALITGITGQDGSYLAEFLLEK-GYEVHGIKRRASQFNTQRVDHIYEDPHESGRHFKLHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E QPD + N A+SHV S + + IGT LLE R Sbjct: 63 GDLTDSSNLTRILSEVQPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + +E P++P SPY+ K + ++ + + YG Sbjct: 120 -LGLEKKT--RFYQASTSELYGLVQEVPQTETTPFHPRSPYAVAKMYAYWICVNYREAYG 176 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + G LY G+ +RDW + +D+VR Sbjct: 177 MYACNGILFNHESPRRGETFVTRKITRGLANIAMGLEPCLYMGNIDALRDWGHAKDYVRM 236 Query: 233 LYLVLKKGR 241 +++L++ R Sbjct: 237 QWMMLQQER 245 >gi|325959042|ref|YP_004290508.1| GDP-mannose 4,6-dehydratase [Methanobacterium sp. AL-21] gi|325330474|gb|ADZ09536.1| GDP-mannose 4,6-dehydratase [Methanobacterium sp. AL-21] Length = 409 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 32/273 (11%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 + +TG GF GS L L+N ++ + +L + N + L+ D+ + Sbjct: 8 IFITGVGGFAGSYLAEELLNQGANVFGLVRRRADGTKPKNLIDHGIQNDVTALEGDLTNI 67 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +AL E +PD I + AA+S V RS + E N IGT LLE +R+ +D Sbjct: 68 TSLANALDESEPDYIFHLAAQSFVPRSFENSAETQIINCIGTSNLLEASRV------KDT 121 Query: 123 KDQFRF--------LQISTDEVYGSLDKGL--------------FSEDMPYNPSSPYSAT 160 + F L IS++ Y S K E P P SPY+ + Sbjct: 122 DAKIVFAGSSEEYGLVISSENQYESATKEYGTIFPKPETIPELPIKETNPLRPMSPYAVS 181 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGS-HVFLYGD 216 K D+L+ + H+YG+ +S N+ G F ++ I ++ G G+ Sbjct: 182 KVYGDHLMQNYYHSYGLDTTVSRAFNHEGAGRGLMFVTSVVTNQIMKLKFGEIENITIGN 241 Query: 217 GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 RDW +V+D V+ + KG+ GE YN G Sbjct: 242 LNAFRDWSHVKDIVQGYMTLATKGKSGEVYNQG 274 >gi|313636385|gb|EFS02163.1| UDP-glucose 4-epimerase [Listeria seeligeri FSL S4-171] Length = 327 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 144/336 (42%), Gaps = 57/336 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +IV GGAG+IGS LVN V+V+D L G+ ++ E ++ F Q DI Sbjct: 1 MSIIVLGGAGYIGSHAVAELVNR-GYNVVVVDNLK-TGHKEAIHEKAK-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D++ + S D +++FAA S V S+ +++ N+ GT ILLE Sbjct: 54 DKDFLSSVFDRETVDGVMHFAASSLVGESMEEPLQYLNNNVYGTQILLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ E M NP S Y TK + ++ YG+ Sbjct: 105 ---EQFGVKNIVFSSSAATYGEPEQVPIIESMSTNPESTYGDTKLIMEKMMKWCDKAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D+++VED H+R+L L+ G +N+G + GF + ++ + + Sbjct: 222 DYVHVEDLIDAHIRSLEY-LENGGESNIFNLGSSK-----------GFSVQEILGAARTV 269 Query: 278 TELI---RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 TE + R G S K K +GW P+ Sbjct: 270 TEKTIPAEVVARRAGDPGILIASSDKAKEILGWEPK 305 >gi|295681240|ref|YP_003609814.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002] gi|295441135|gb|ADG20303.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002] Length = 331 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 136/331 (41%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV VL +D Y G +++ + F ++ D+ Sbjct: 8 RILVTGGAGFLGSHLCERLVTQGH-DVLCVDNF-YTGTKDNIAHLLDCPNFELMRHDV-- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 64 -----TFPLYVEVDEIYNLACPASPIHYQYDPVQTTKTSVHGAI----------NMLGLA 108 Query: 122 KKDQFRFLQISTDEVYGSL-----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R Q ST EVYG + + P P S Y K ++ L + + +G Sbjct: 109 KRVKARIFQASTSEVYGDALVHPQKENYWGHVNPIGPRSCYDEGKRCAETLFMDYRRQHG 168 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP P +++ + + + G + +YGDG R + YV+D + A Sbjct: 169 LSIRIARIFNTYGPRMHPSDGRVVSNFMMQALRGEPLTVYGDGTQTRSFCYVDDMIDAFI 228 Query: 235 LVLKKG-RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L++ G N+G +E +I I + S S E D P H + Sbjct: 229 LLMNSTDDPGGPVNLGNPHEVSMREIAQRI-----VAVTGSASPLEAQPLPADDPWHRQP 283 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S +GW P +++ GL +T ++ Sbjct: 284 ---DISLAIKLLGWRPGMSLDEGLLRTAHYF 311 >gi|196018051|ref|XP_002118722.1| hypothetical protein TRIADDRAFT_34621 [Trichoplax adhaerens] gi|190578384|gb|EDV18793.1| hypothetical protein TRIADDRAFT_34621 [Trichoplax adhaerens] Length = 236 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 24/233 (10%) Query: 99 TNIIGTFILLEETRLWWSCLSQDKKDQFRFLQI-STDEVYGSLDKGLFSEDMPYNPSSPY 157 +N++GT +LE R + ++Q I S+D+ YG K ++E+ P PY Sbjct: 10 SNVMGTLNILEAIRKF--------RNQVTGAVIASSDKAYGHSTKLPYTENHPLRGLYPY 61 Query: 158 SATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGD 216 A+KA +D L ++ +Y +P+ + C+N YGP+ F +LIP I + + D Sbjct: 62 DASKACTDILAQSFAQSYRLPIGVLRCANLYGPHDFHVSRLIPGTILSYLRDEQPVIRSD 121 Query: 217 GQNVRDWLYVEDHVRALYL-----VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI 271 G RD+LY++D V A YL + KK + NIG + V E+ L+ L+ Sbjct: 122 GSYRRDYLYIDDAVDA-YLKFMDSIEKKQKKVIALNIGTDRAYS----VQEVVRLIAELM 176 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 K + T + + G ++S + K I W + +E GL KT+ Y Sbjct: 177 NKPFKPT----LLNNCKGEIHSQFLNSMQAKHSINWCAKTILEEGLMKTIESY 225 >gi|319425790|gb|ADV53864.1| UDP-glucose 4-epimerase [Shewanella putrefaciens 200] Length = 337 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ L+ +V+V+D L+ + LN ++ I+ ++ +F Q D Sbjct: 1 MTILVTGGAGYIGTHTVVELLK-AGCEVIVLDNLSNSSIEALNRVERITGKSV-TFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + D++++FA V S+ ++ N+ GT +L + + Sbjct: 59 ILNKALLQKVFSDHAIDSVIHFAGLKAVGESVAKPLKYYENNVTGTLVLCQ-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ K F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFKVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--------SHVFLYGDGQ 218 Y PV ++ S G P P L+P I ++ G H + DG Sbjct: 170 NIARLRYFNPV-GAHSSGLIGEDPNDIPNNLMPF-IAQVAVGKRAVLSVFGHDYPTHDGT 227 Query: 219 NVRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D H++AL L K G + YN+G +D++ FE Sbjct: 228 GVRDYIHVVDLAKGHLKALEKLATKPGLV--TYNLGTGQGYSVLDMIKAFE--------- 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ T + RPG D + K +GW +E N + W N Sbjct: 277 -KACGKTIAYQIAPRRPGDIAACYADPTHAKQSLGWHATHTLEDMANSSWHWQSTN 331 >gi|189465943|ref|ZP_03014728.1| hypothetical protein BACINT_02306 [Bacteroides intestinalis DSM 17393] gi|189434207|gb|EDV03192.1| hypothetical protein BACINT_02306 [Bacteroides intestinalis DSM 17393] Length = 360 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 36/256 (14%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS L +L+ N +I+ L +D+ ++++ Sbjct: 6 LLTGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTGRIEHLYLDEW--------VRDMR 57 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 Q L + D+ D + +++ QPD I N AA+SHV S + + +GT + Sbjct: 58 QQRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAVGTLRM 117 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK + Q ST E+YG + + E P+ P SPY K ++ Sbjct: 118 LEAVRI----LGLEKKT--KIYQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQYGFWI 171 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ RD Sbjct: 172 TKNYRESYGMFSVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNLDARRD 230 Query: 223 WLYVEDHVRALYLVLK 238 W Y +D+V ++L+L+ Sbjct: 231 WGYAKDYVECMWLMLQ 246 >gi|188580532|ref|YP_001923977.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179344030|gb|ACB79442.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 370 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/373 (23%), Positives = 149/373 (39%), Gaps = 73/373 (19%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS--NLFSFLQVDIC 60 +++TGGAGFIG L L+ +V V+D L ++ + + + F+ D+ Sbjct: 5 VLITGGAGFIGRHLASALLAR-SYRVRVLDSLIE--QVHGARTVPEGLDPAVEFVAGDVR 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + AL +V+ AAE V +S+ + +++ N GT L + + + Sbjct: 62 DGEAVARALAGAT--HVVHLAAEVGVGQSMYAVERYVSVNDCGTATLFQ------ALIEA 113 Query: 121 DKKDQFRFLQISTDEVYGS----LDKGLFSEDM---------PYNPSSP----------- 156 K R + S+ +YG G ED P++P P Sbjct: 114 PVK---RVVVASSMSIYGEGLYRAGDGTTVEDAVRKPRKPGEPWDPPGPDGQPLRPVPTP 170 Query: 157 ----------YSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---P-EKLIPLAI 202 Y+ TK + L L YG+ + N YGP P ++ + Sbjct: 171 ETKRPALASVYALTKYMQERLTLTLAPAYGMEGVALRLWNAYGPGQALSNPYTGVLAIFA 230 Query: 203 TRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK-KGRIGERYNIGGNNERKNIDIVF 261 R++ G ++ DG+ RD+++VED +A L L+ +G+ YN+G +R V Sbjct: 231 ARLLNGQPPMIFEDGEQRRDFVHVEDVAQAFVLALEHPAAVGQVYNVGSGQDR----TVN 286 Query: 262 EIGFLL------DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMES 315 E+ LL + + P++ L G R D KI E+G+ P+ + Sbjct: 287 EVAQLLARAMGREDIAPQATGQARL--------GDIRHCIADIGKITRELGYAPKRDFAD 338 Query: 316 GLNKTVCWYLDNN 328 GL + W + Sbjct: 339 GLAELAAWVAEQQ 351 >gi|15895601|ref|NP_348950.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|15025343|gb|AAK80290.1|AE007734_4 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|325509749|gb|ADZ21385.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018] Length = 301 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 78/324 (24%), Positives = 147/324 (45%), Gaps = 29/324 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAGFIGS + + L+ +V VID + + + N E+ N++ + DI Sbjct: 1 MNILVTGGAGFIGSHVVKSLLEHGH-KVSVIDNMVHGNSSNLPDEV---NIYKY---DIS 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E I +A K +P+ +++ AA+ V S+ N++G+ +LE R + Sbjct: 54 EAE-IENAFKIERPEVVIHNAAQISVADSVKDPLYDAKVNVLGSINILEMCRKYAV---- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + + ++ ++G E P N S Y +K + ++ + + Y I Sbjct: 109 -----RKVIYPASAAIFGEPKYLPIDEKHPLNMISSYGVSKHTVEHYLNVYKKLYNINYT 163 Query: 181 LSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 + SN YGP ++ + ++ +G + +YG+G +RD++YV+D A L L Sbjct: 164 VLRYSNVYGPGQDSSGEGGVVSIFAEKLTKGEPLCIYGNGNQIRDFVYVKDVTEANILAL 223 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + YN+ N + D L L+ ++Y I +R G + Sbjct: 224 NSLD-NDIYNVSTNTKTTIND--------LAKLMCEAYGKEVEIMHKGERAGDIFESYMS 274 Query: 298 SSKIKSEIGWFPQENMESGLNKTV 321 KI + GW P+ +++ G+ +T+ Sbjct: 275 YDKIYNACGWKPKYDLKLGIKETI 298 >gi|194335722|ref|YP_002017516.1| GDP-mannose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] gi|194308199|gb|ACF42899.1| GDP-mannose 4,6-dehydratase [Pelodictyon phaeoclathratiforme BU-1] Length = 380 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 33/295 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + + E QPD + N A+SHV S + + +GT LLE R Sbjct: 72 DLTDSSNLTRIISEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRF---- 127 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E++G + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 128 LGLEKKS--RFYQASTSELFGLVQEIPQRESTPFYPRSPYAVAKLYAYWITVNYREAYGM 185 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 +L ++ S+ G F + I ++ + +G LY G+ +RDW + +D+VR Sbjct: 186 YACNGILFNHESSRRGET-FVTRKITRSLANITQGLEECLYVGNMNALRDWGHAKDYVRM 244 Query: 233 LYLVLKKG-------RIGERYNIGGNNERKNIDIVF----------EIGFLLDALIP-KS 274 +++L++ G +Y++ E+ + EIG + + P S Sbjct: 245 QWMMLQQELPRDYVIATGVQYSVRQFIEKSAAQLGISIRWEGEGREEIGVIENLSTPYAS 304 Query: 275 YSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 +I ++ RP D +K K+++GW P+ ++ + + V LD Sbjct: 305 LREGSVIVRVDARYFRPAEVETLLGDPAKAKADLGWVPEITLDEMVEEMVAHDLD 359 >gi|257469346|ref|ZP_05633440.1| NAD-dependent epimerase/dehydratase [Fusobacterium ulcerans ATCC 49185] gi|317063593|ref|ZP_07928078.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Fusobacterium ulcerans ATCC 49185] gi|313689269|gb|EFS26104.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Fusobacterium ulcerans ATCC 49185] Length = 317 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 31/334 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + ++ G AGF+G L +L +D+K +V Y LN+ K I + ++ +DI + Sbjct: 3 KAMIIGAAGFVGGYLIDHLKDDMKWEV-------YGTKLNTEK-IEREDI-EIYNLDILN 53 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I ++ +PD I N AA+S V S I NI G +L+ R D Sbjct: 54 KEEIIKIFEKIKPDYIFNLAAQSSVSLSWKNPLLTIDINIKGAINILDAVR------EID 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLF--SEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 K D R + I + E YG + + E+ P + Y+ TK + + + YG+ + Sbjct: 108 KYDP-RTMLIGSSEEYGYVKENEIPVKEENNLRPGNIYAVTKVCQNMIGKIYSDAYGMDI 166 Query: 180 LLSNCSNNYGPYHFPEKLIP---LAITRMIEG--SHVFLYGDGQNVRDWLYVEDHVRALY 234 + N+ GP P ++ ++ + +G + G+ + RD+ V D VRA Sbjct: 167 VNVRAFNHIGPKQAPIFVVADFCKQVSEIEKGLREPIIYTGNLEAKRDFTDVRDIVRAYS 226 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED-RPGHDRR 293 + G+ GE YN+G I +LD ++ S + E+ R + RP Sbjct: 227 ALALNGKKGETYNVGSGK-------AISIKEILDIILKNSTKNIEIRRDEKRYRPIDISI 279 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D K++ I W P+ +E + + + ++ N Sbjct: 280 IEADIEKLRKVIDWKPEILLEESIKEILGYWRKN 313 >gi|222834133|gb|EEE72610.1| predicted protein [Populus trichocarpa] Length = 233 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 16/238 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN---LNSLKEISQS--NLFSFLQ 56 R ++TG G GS LC YL+ D +V I + + N ++ L E Q+ Sbjct: 3 RALITGITGQDGSYLCEYLL-DKGYEVHGIKRRSSLFNTERIDHLYEDPQAPDRRLILHH 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ +PD + N AA+SHV S + T+ +GT LLE R+ Sbjct: 62 GDMTDTASLVRVVQQSRPDEVYNLAAQSHVQVSFEEPEYTANTDAVGTLRLLEAMRIL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 120 ----GMEQSTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 + N+ P F + I AI R+ G LY G+ +RDW + D+V Sbjct: 176 MYACNGILFNHESPVRGETFVTRKITRAIARIALGLQEVLYLGNLSALRDWGHARDYV 233 >gi|171778819|ref|ZP_02919881.1| hypothetical protein STRINF_00740 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282465|gb|EDT47889.1| hypothetical protein STRINF_00740 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 332 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 52/349 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ + +V+V+D L G+ ++ + +F Q D+ Sbjct: 1 MSILVLGGAGYIGSHMVDRLIEKGEEKVVVVDSLV-TGHRAAVHPDA-----TFYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R E P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFTE-NPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMIKLLEVMNEFGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG D+ E P P +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPDELPIKETTPQRPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 GI P+ N + + G H PE + I ++ +G + ++G DG N Sbjct: 162 GIKFVPLRYFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGNDYNTPDGTN 221 Query: 220 VRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 +RD+++ D A L L++G +N+G + N+ I+ + IP + Sbjct: 222 IRDYVHPFDLADAHLLAVKYLREGNPSTAFNLGSSTGFSNLQILEAARKVTGKEIPAELA 281 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + RPG S K + +GW PQ +++E + W+ Sbjct: 282 --------DRRPGDPDTLVASSDKAREILGWKPQFDDIEKIIASAWAWH 322 >gi|328471286|gb|EGF42186.1| UDP-glucose 4-epimerase [Listeria monocytogenes 220] Length = 330 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ +V+VID NL + + S F + DI Sbjct: 1 MSIVVLGGAGYIGSHAVDELITR-GYEVVVID------NLRTGHKESIHTKAKFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ ++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A ++ + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|323489103|ref|ZP_08094337.1| UDP-glucose 4-epimerase [Planococcus donghaensis MPA1U2] gi|323397226|gb|EGA90038.1| UDP-glucose 4-epimerase [Planococcus donghaensis MPA1U2] Length = 276 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 37/269 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LVN V+V+D LT +++ S +F++ D+ Sbjct: 1 MAILVCGGAGYIGSHTVKELVN--TYDVVVLDNLT-----TGFEQLIDSKA-TFIKGDLG 52 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + DA+ +FAA S V S+ ++ N+ T +LLE+ + Sbjct: 53 DSAILDEIFTTHKIDAVFHFAANSLVGESVQNPLKYYRNNVSATLVLLEK------MIEH 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 K RF+ ST YG D + +E+ NP +PY +K + ++ H + + Sbjct: 107 GVK---RFIFSSTAATYGIPDTDMITEETATNPINPYGRSKLMIEQVLADLAHVHDFQYV 163 Query: 181 L--------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 + ++ S G H PE LIP+ + ++ + + ++G DG +RD++ Sbjct: 164 VLRYFNAAGAHESGEIGESHDPESHLIPIVLQHLLGQRDKISVFGTDYETADGTCIRDYI 223 Query: 225 YVEDHVRALYLV---LKKGRIGER-YNIG 249 +V D RA L + G+I + YN+G Sbjct: 224 HVTDLARAHILSYEGMATGKITNKTYNLG 252 >gi|150006468|ref|YP_001301212.1| putative UDP-glucose 4-epimerase [Bacteroides vulgatus ATCC 8482] gi|294777011|ref|ZP_06742469.1| NAD-binding protein [Bacteroides vulgatus PC510] gi|149934892|gb|ABR41590.1| putative UDP-glucose 4-epimerase [Bacteroides vulgatus ATCC 8482] gi|294449069|gb|EFG17611.1| NAD-binding protein [Bacteroides vulgatus PC510] Length = 312 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+ + I V+ +D + G+ ++ + F ++ DI Sbjct: 3 RILVTGGAGFIGSHLCTRLIEEGNI-VICLDNF-FTGSKENISYLIGHPRFELIEHDI-- 58 Query: 62 RECIRSALKEF--QPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 + F D I N A + A + T + GTF + L Sbjct: 59 -------INPFWTDVDEIYNLACPASPIHYQHDAIKTAKTAVFGTF----------NMLG 101 Query: 120 QDKKDQFRFLQISTDEVYGS-----LDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 K+++ + LQ ST EVYG +G + P S Y K ++ L + + Sbjct: 102 LAKRNKAKILQASTSEVYGDPLSHPQREGDWGNVNPIGYRSCYDEGKRCAETLCMDYYRQ 161 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ V + N YGP + ++I + + + + +YGDG+ R + Y++D V Sbjct: 162 HGVLVKIIRIFNTYGPNMLTDDGRVISNFVVQALLDKDITIYGDGKQTRSFQYIDDLVEG 221 Query: 233 LY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ + NIG E F I L ++ + SH+ +I E P D Sbjct: 222 MIRMMATEDHFTGPVNIGNPCE-------FSIFELAQKILELTCSHSNII--FEPLPHDD 272 Query: 292 -RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D + K ++ W P ++E GL K + ++ Sbjct: 273 PRQRRPDITLAKEKLDWEPHIHLEEGLMKVIDYF 306 >gi|116071591|ref|ZP_01468859.1| UDP-glucose 4-epimerase [Synechococcus sp. BL107] gi|116065214|gb|EAU70972.1| UDP-glucose 4-epimerase [Synechococcus sp. BL107] Length = 344 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/360 (25%), Positives = 150/360 (41%), Gaps = 51/360 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDI 59 R+++TGGAGFIGS L+ +++V+D + L +KE++ SN F++ D+ Sbjct: 4 RVLITGGAGFIGSHTALVLLEQ-GYELVVLDNFDNSSPEALERVKELTGSNSLDFVEGDV 62 Query: 60 CDRECIRSALKEFQP-DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D + + A P D +++FA V S+ + N+ G+ R+ + + Sbjct: 63 RDLDAVNRAFDCGGPIDGVIHFAGLKAVGESVADPLRYWDVNLNGS-------RVLAAAM 115 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 Q + F ST VYG + E MP P PY+ TK + + ++ A + Sbjct: 116 EQHQCRTLVFSSTST--VYGEPEVFPLHEQMPTAPVHPYAQTKCAVEQMLGALCRSRDWR 173 Query: 175 -----YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSH--VFLYG------DGQN 219 Y PV ++ S G P P L P IT++ G + ++G DG Sbjct: 174 VACLRYFNPV-GAHPSGRIGEDPLGIPNNLFPF-ITQVASGRRDKLRIFGQDYPTHDGTG 231 Query: 220 VRDWLYVEDHVRALYLVLKKGRIGE-------RYNIGGNNERKNIDIVFEIGFLLDALIP 272 +RD+L+V D A + L G + + NIG +D+V GF +P Sbjct: 232 IRDYLHVMDLAEAHSVTL--GHLFQATAPHQLTLNIGTGYGLSVLDVVH--GFEQATGLP 287 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +Y F+E RPG + K K +GW Q ++ W N +R Sbjct: 288 IAY------EFVERRPGDVPKLEGCPQKAKDILGWSAQRDLAQMCRDGWAWQQANPMGYR 341 >gi|182411999|ref|YP_001817065.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] gi|177839213|gb|ACB73465.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1] Length = 308 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 38/333 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGF+GS LC LV D V+ ID L + G +L+ + F F++ D+ Sbjct: 1 MRILVTGGAGFLGSHLCDRLVADGH-DVVAIDNL-FTGRKANLQHLLPHPRFEFVRHDVI 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +F+ D I N A + + T+++G + L Sbjct: 59 DP-------FKFEVDQIYNLACPASPPHYQYNPIKTTKTSVMGAI----------NSLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ + R Q ST EVYG D + + Y NP S Y K ++ L + Sbjct: 102 AKRVKARVFQASTSEVYG--DPSVHPQPESYWGNVNPIGKRSCYDEGKRCAETLFFDYHR 159 Query: 174 TYGIPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + + + N YGP Y +++ I + + G + +YGDG R + YV+D + Sbjct: 160 ENKVDIRVVRIFNTYGPRMYEADGRVVSNFIVQALRGEDLTIYGDGSQTRSFCYVDDLIE 219 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + + N+G E + E+ L L+ L +D Sbjct: 220 GFVRFMAQTETVGPMNLGNPGEF----TMLELAELTLKLVGGKSKIVHLPLPADD----P 271 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D + + + W P+ +E GL +T+ ++ Sbjct: 272 KQRQPDITLARQLLKWEPKVALEDGLKRTIEYF 304 >gi|218232823|ref|YP_002368232.1| CDP-abequose synthase [Bacillus cereus B4264] gi|218160780|gb|ACK60772.1| CDP-abequose synthase [Bacillus cereus B4264] Length = 319 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 145/326 (44%), Gaps = 24/326 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++TGG GFIGS L R L+N VL I + + L + + ++ ++DI D+ Sbjct: 10 FLITGGYGFIGSHLARRLLNLHAKIVLFIRTPSNSWRLKDILKYIET-----YEIDIRDK 64 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + ++ A+K+ PD I + AA V+ + I TN+IGT +++ +L +C Sbjct: 65 KQVQDAIKKINPDYIFHLAAYG-VNSAHTDYIHAIETNVIGTCNIIQAAKL-VNCK---- 118 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + + YG+ + + E+M P Y +TKA++ L I ++ Sbjct: 119 ----KIINFGSSSEYGNKMEPI-HENMLLTPVDIYGSTKAAATILAHQIASENNINLITL 173 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 +G P K+ I R+++ V L Q +RD+ Y+E+ + A L ++ + Sbjct: 174 RPFGIFGEGEEPHKIFSYIILRVLQNKDVNLTLCNQ-LRDYCYIENVIDACILAVENTTV 232 Query: 243 -GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 E +NIG + + L L S + I R D KI Sbjct: 233 QNEIFNIGSGTIH---PLKHYVELLFKHLKTNSRPNYGA---ISSRTNERWVPEADVQKI 286 Query: 302 KSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + W P+ N+E G+ KTV WY +N Sbjct: 287 KNSLSWEPRINIEEGIIKTVNWYKNN 312 >gi|332139642|ref|YP_004425380.1| UDP-glucose 4-epimerase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549664|gb|AEA96382.1| UDP-glucose 4-epimerase [Alteromonas macleodii str. 'Deep ecotype'] Length = 338 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/357 (25%), Positives = 147/357 (41%), Gaps = 46/357 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C LV + V+VID ++A L ++ I + + + + D Sbjct: 1 MHILVTGGAGYIGSHTCISLV-EASHSVVVIDDFSNSHAEALKRVEGICNTEIPHY-EGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E +R E D +++FA V S+ + N+ + L+E + Sbjct: 59 VGDEELLRRVFSEHTFDGVIHFAGSKAVGESVEKPMLYYRNNVTASQTLIE-------TM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV----LAWGHT 174 Q F +T VYG ED P ++PY +K + ++ A Sbjct: 112 HQAGVHTLVFSSSAT--VYGDPQTVPIVEDFPVGATNPYGRSKLMVEQIIQDFATATAQF 169 Query: 175 YGI------PVLLSNCSN-NYGPYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNV 220 GI PV C P P L+P +A + + SH+ ++G DG V Sbjct: 170 NGIILRYFNPVGAHPCGRIGEDPSGIPNNLMPFIAQVAVGKRSHLAVFGDDYPTNDGTGV 229 Query: 221 RDWLYV----EDHVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 RD+++V E HVRAL + G+ G N+G + +++V D IP Sbjct: 230 RDYIHVCDLAEGHVRALEQL--HGKPGSHCLNLGTGSGVSVLEMVDAYAKASDRPIP--- 284 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + RPG + +SS K +GW +E + + W N +R Sbjct: 285 -----YQIAPRRPGDVAQCYANSSHAKEVLGWQATRTLEDMVKDSWRWQSSNPNGYR 336 >gi|291542775|emb|CBL15885.1| UDP-galactose 4-epimerase [Ruminococcus bromii L2-63] Length = 330 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 96/371 (25%), Positives = 168/371 (45%), Gaps = 66/371 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++V GGAG+IGS L+ +V+V D L G++ ++ ++ F + D+ Sbjct: 1 MKILVLGGAGYIGSHTVYRLIESGN-EVVVFDNLE-TGHIEAVHPKAK-----FYKGDLR 53 Query: 61 DRECIRSAL-KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 +R I + KE DA+++FAA S V S+ ++ N+ GT +LL+ + Sbjct: 54 NRSEIDNVFDKEKGIDAVIHFAANSLVGESMTNPLKYYDNNLNGTKVLLQ-------SMV 106 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D+ F ST YG ++ E P NP++ Y TK S + + +G+ Sbjct: 107 AHGIDKIVFS--STAATYGEPERTPILETDPTNPTNCYGETKKSMERMFYWVEKAHGLRY 164 Query: 180 LL--------SNCSNNYGPYHFPE-KLIPLAITRMIEGS--HVFLYG------DGQNVRD 222 + ++ S G H PE LIP+ I + +G+ H+ ++G DG +RD Sbjct: 165 VSLRYFNACGAHISGKIGEAHNPETHLIPI-ILQAAQGTRDHISIFGTDYPTSDGTCIRD 223 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D H+ A+ ++K G+ + +N+G +GF + +I K+ T Sbjct: 224 YIHVTDLAQAHILAVEYLMKGGK-SDIFNLGNG-----------VGFSVREVIEKAKEVT 271 Query: 279 EL-IRFIED--RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 + I+ +E+ R G S K K+ +GW P+ + + KT W W + Sbjct: 272 QKDIKVVEESRRSGDPAVLIASSDKAKTVLGWKPEYDDLGTIIKTA-------WKWHSTH 324 Query: 336 KELKPDNDYSK 346 N YSK Sbjct: 325 P-----NGYSK 330 >gi|300779206|ref|ZP_07089064.1| O-antigen biosynthesis protein [Chryseobacterium gleum ATCC 35910] gi|300504716|gb|EFK35856.1| O-antigen biosynthesis protein [Chryseobacterium gleum ATCC 35910] Length = 322 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 32/338 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 ++++TGGAGFIGS L Y +N V+ +D G+ ++++ ++ + ++ DI D Sbjct: 3 KILITGGAGFIGSNLTEYFLNK-GYYVVCLDNFA-TGHRHNIEPFLENPNYKLIEGDIRD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + A+K D I++ AA V RSI N+ G +L R Sbjct: 61 LEVCKEAVKNV--DYILHQAALGSVPRSIKDPITSNDVNVSGFLNMLVAAR--------- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + RF+ ++ YG + ED+ P SPY+ TK ++ +G TYGI + Sbjct: 110 DANVKRFVYAASSSTYGDSESLPKVEDVIGRPLSPYAITKYVNELYADVFGKTYGIKCIG 169 Query: 182 SNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +G P +IPL + ++I + G G RD+ Y+++ ++ L + Sbjct: 170 LRYFNVFGRRQDPNGAYAAVIPLFVKQLINHESPTINGTGDYSRDFTYIDNVIQMNELAM 229 Query: 238 ---KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 I YN + D+V G+L L E I +E G +R Sbjct: 230 LTENPEAINTVYNTAVGDRTTLNDLV---GYLKKYL----SEFDEKIGDVEVVHGPNRVG 282 Query: 295 AIDSS-----KIKSEIGWFPQENMESGLNKTVCWYLDN 327 I S K + +G+ P +E GL + + WY +N Sbjct: 283 DIPHSLASVEKAEKLLGYKPSHTIEKGLKEAISWYWEN 320 >gi|190889705|ref|YP_001976247.1| dTDP-glucose 4,6-dehydratase [Rhizobium etli CIAT 652] gi|190694984|gb|ACE89069.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CIAT 652] Length = 340 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 47/335 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLK-IQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +V GGAGF+GS LC L+ L+ V+ +D + +N + + + F ++ D+ Sbjct: 26 LVNGGAGFLGSHLCERLL--LRGYSVICLDNFSTGRRVN-VDHLQSNPRFRIIEHDVRQP 82 Query: 63 ECIRSALKEFQPDAIVNFAAESH---VDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I ++L I NFA+ + R +G + TN++G L+ R + + Sbjct: 83 FDIAASL-------IFNFASPASPPDYQRDPVGT---LLTNVLGAVNTLDCGRKTGAIV- 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHT 174 +Q ST EVYG + E P P + Y K S++ L + T Sbjct: 132 ---------VQSSTSEVYGDPSQSPQRETYCGNVNPIGPRACYDEGKRSAETLFFDYHRT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ + + N YGP + +++ I + + + + +YGDGQ R + YV+D V Sbjct: 183 YGVDIKIGRIFNTYGPRMRLDDGRVVSNFIVQALRNADLTIYGDGQQTRSFCYVDDLVEG 242 Query: 233 LYLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF--IEDRPG 289 + G N+G E F + L + + + S + ++ + D P Sbjct: 243 FLRLSAAGSACHGPINLGNPGE-------FTVRRLAEIIRDLTNSRSRIVHLPAVVDDP- 294 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D ++ +E+GW PQ +E+GL +TV ++ Sbjct: 295 --RQRRPDITRAMTELGWQPQIALEAGLARTVEYF 327 >gi|162455054|ref|YP_001617421.1| sugar nucleotide epimerase [Sorangium cellulosum 'So ce 56'] gi|161165636|emb|CAN96941.1| sugar nucleotide epimerase [Sorangium cellulosum 'So ce 56'] Length = 378 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 41/331 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TGGAGFIG+ L L+ + V++ D L+ +++ + +++ + R+ Sbjct: 20 LITGGAGFIGANLAHRLLQAGE-AVILFDNLSRPSVARNVEWLRRTHGDRVTLITGDVRD 78 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 A + ++ +FAA+ V S++ E N GT +LE R ++ Sbjct: 79 ARAVAAAVRRASSVFHFAAQVAVTTSLVQPVEDFEINARGTLNVLEAIR------AEGAP 132 Query: 124 DQFRFLQISTDEVYGSL---------------DKGL----FSEDMPYNPSSPYSATKASS 164 F ST++VYG L D L SE P + SPY +K ++ Sbjct: 133 PPLLF--TSTNKVYGGLPDVPLSCSGRRYEPADPELRASGVSEARPLDFHSPYGCSKGAA 190 Query: 165 DYLVLAWGHTYGIPVLLSNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVR 221 D V+ + T+G+P + S YGP F + + + + + + LYGDG VR Sbjct: 191 DQYVIDYARTFGLPAAVFRMSCIYGPRQFGTEDQGWVAHFLLQALRREPITLYGDGMQVR 250 Query: 222 DWLYVEDHVRALYLVLKKGR--IGERYNIGGNNERK-NIDIVFEIGFLLDALIPKSYSHT 278 D L+++D V AL L + R +N+GG E ++ + ++ LD P Sbjct: 251 DVLFIDDLVDALLLARRDIRQISASAFNVGGGPENTLSLLELLDLIEELDGKRP------ 304 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 LI F RPG R Y D ++ + GW+P Sbjct: 305 -LIGFEGWRPGDQRYYVSDCRRLSAATGWWP 334 >gi|152993300|ref|YP_001359021.1| hypothetical protein SUN_1714 [Sulfurovum sp. NBC37-1] gi|151425161|dbj|BAF72664.1| hypothetical protein [Sulfurovum sp. NBC37-1] Length = 177 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 7/127 (5%) Query: 205 MIEGSHVFLYGD-GQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEI 263 +++ + F+ G+ G+N+RDWLYV D+ + L + YNIG NER N IV + Sbjct: 49 VVDPKYTFIKGNNGKNLRDWLYVSDYYKGKDLDYHTDKAESVYNIGRRNERTNQQIVERV 108 Query: 264 GFLLDALIPKSY----SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + ++P+++ S ELI +ED GHD R+AID+ KI+ E+G EN +S + K Sbjct: 109 --TDEKILPQAHIGKKSSKELISCVEDHTGHDHRHAIDTIKIEMELGLKADENFDSSIVK 166 Query: 320 TVCWYLD 326 T+ W L+ Sbjct: 167 TIEWSLE 173 >gi|2494669|sp|Q59083|EXOB_AZOBR RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|396521|emb|CAA80967.1| UDP-glucose 4-epimerase [Azospirillum brasilense] Length = 348 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 47/341 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAG+IGS + L D I + ID L+ AG ++ ++ DI Sbjct: 10 RVLVTGGAGYIGSHVLHAL-TDAGIPAVTIDDLS-AGRREAIPAA-----VPLVEGDIGS 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + +++ + DA+++FA V S++ ++ N + LL +CL + Sbjct: 63 AELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLL------GACL-RA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 D+ F ST VYG+ + ED P P +PY A+K ++ ++ G +G+ ++ Sbjct: 116 GIDKVVF--SSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQMLRDAGAAHGLRSVI 173 Query: 182 SNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFLYG---------------DGQNVRDWL 224 N G P + P+A T +I+ + L G DG +RD++ Sbjct: 174 LRYFNVAGADPAGRTGQATPVA-THLIKVACQALLGRRPPLAIFGTDYDTPDGTCIRDYI 232 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV AL L L++G N G ++V + + +P + Sbjct: 233 HVSDLADAHVLAL-LHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPAT------ 285 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 F + RPG + + +I+ ++GW P+ + G+ ++ Sbjct: 286 --FADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGIVRSA 324 >gi|329963018|ref|ZP_08300798.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] gi|328529059|gb|EGF55989.1| GDP-mannose 4,6-dehydratase [Bacteroides fluxus YIT 12057] Length = 360 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 36/256 (14%) Query: 4 IVTGGAGFIGSALCRYLV----------------NDLKIQVLVIDKLTYAGNLNSLKEIS 47 ++TG G GS L +L+ N +I+ L +D+ ++++ Sbjct: 6 LITGITGQDGSFLAEFLIEKGYEVHGILRRSSSFNTGRIEHLYLDEW--------VRDMK 57 Query: 48 QSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFIL 107 + L + D+ D + ++ QPD I N AA+SHV S + ++ +GT + Sbjct: 58 KDRLINLHYGDMTDSSSLIRIIQLVQPDEIYNLAAQSHVKVSFDVPEYTAESDAVGTLRM 117 Query: 108 LEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL 167 LE R+ L +KK R Q ST E++G + + E P+ P SPY K ++ Sbjct: 118 LEAVRI----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWI 171 Query: 168 VLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRD 222 + +YG+ +L ++ S G F + I LA R+ +G LY G+ ++RD Sbjct: 172 TKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGFQDKLYLGNLDSLRD 230 Query: 223 WLYVEDHVRALYLVLK 238 W Y D+V ++L+L+ Sbjct: 231 WGYARDYVECMWLILQ 246 >gi|262067188|ref|ZP_06026800.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] gi|291379091|gb|EFE86609.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] Length = 329 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 43/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+VID L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVIDSLI-TGHVDAVDEKAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLK-------VMKA 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 HNVDKIVF--SSTAATYGEAESMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V ++ S G H E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAHPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L + R G + +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRNGGDSQIFNL-GNGEGFSVKEVIEV-------TRKVTGHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K + W P+ Sbjct: 277 EVSPRRAGDPARLIASSQKALDTLKWVPK 305 >gi|260774424|ref|ZP_05883338.1| UDP-glucose 4-epimerase [Vibrio metschnikovii CIP 69.14] gi|260610551|gb|EEX35756.1| UDP-glucose 4-epimerase [Vibrio metschnikovii CIP 69.14] Length = 334 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 152/348 (43%), Gaps = 44/348 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNS--LKEISQSNLFSFLQ 56 M+ +VTG AGFIGSA + L D V+ ID + Y NL L I LF F+Q Sbjct: 1 MKYLVTGAAGFIGSATVKKLT-DQGHHVVGIDNINDYYDVNLKHARLARIDHP-LFRFIQ 58 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +DI DR + ++ + + +++ AA++ V S+ + +N++G +LE R Sbjct: 59 LDIADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR---- 114 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLF-SEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 Q+K + S+ VYG K F + D +P S Y+ATK S++ + ++ H Y Sbjct: 115 ---QNKVGHLVYA--SSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLY 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALY 234 IP YG + P+ + P T+ I G + + G RD+ +V+D V + Sbjct: 170 DIPTTGLRFFTVYGSWGRPD-MAPFIFTKKILAGETIDINNHGDMWRDFTHVDDIVEGVV 228 Query: 235 LV------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 + ++ G YNIG + ++ V I L K++ Sbjct: 229 RIADVLPTRNAAWTVESGTPATSSAPYAIYNIGHGSPINLMEFVKAIEDQLGIEAKKNFR 288 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + PG + D+ + + G+ P+ ++ G+ + + WY Sbjct: 289 GMQ--------PGDVYQTYADTEDLFTATGYRPRVGVKEGVAEFINWY 328 >gi|328472949|gb|EGF43797.1| putative dTDP-glucose 4-6-dehydratase [Vibrio parahaemolyticus 10329] Length = 344 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 57/343 (16%) Query: 3 LIVTGGAGFIGSALCRYLV-----NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV 57 ++VTG G + + R+ V + L I+VL++ + E NLF L Sbjct: 31 VLVTGATGMLAVCMVRFFVYLNRKDQLNIRVLLLAR----------SEQKVQNLFGELTG 80 Query: 58 DICDRECI-RSALKEFQPDAIVNF-------AAESHVDRSILGADEFITTNIIGTFILLE 109 + EC + + + D V+F A+ H+ +G I N++GT LLE Sbjct: 81 EF---ECFYQDVCQPIEFDDEVDFVIHAASNASPHHIKHDPVG---IIQANVVGTMNLLE 134 Query: 110 ETRLWWSCLSQDKKDQFRFLQISTDEVYGSL---------DKGLFSEDMPYNPSSPYSAT 160 L ++K+ + FL +ST EVYG+L D G F P + S Y + Sbjct: 135 --------LVKNKRVK-NFLFMSTREVYGNLESQELIRERDFGSFD---PLDSRSCYPES 182 Query: 161 KASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQ 218 K ++ L+ ++ + +P +++YGP F +++ + +I+ + L DG Sbjct: 183 KRMAETLLQSYAIQHDVPFTAVRIAHSYGPGMFLNDGRVMSDLVGCVIDNQPIVLKSDGS 242 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +R + YV D V A+ LVL KG + YNI NE + + I+ L D S Sbjct: 243 ALRSFCYVTDAVSAMLLVLLKGEVNTAYNIA--NETEEVSILQLANLLSDLGGGISSVKH 300 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 E+ ++ +R + + KI++ + W P+ +++SGL KT+ Sbjct: 301 EISN--DNAYCQYKRTKLCTEKIEA-LSWKPRVDLKSGLEKTI 340 >gi|91774155|ref|YP_566847.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91713170|gb|ABE53097.1| UDP-glucoronic acid decarboxylase [Methanococcoides burtonii DSM 6242] Length = 313 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 40/335 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR +VTGGAGF+ S +C L++ +V+ +D L N ++ + F+F+ DI Sbjct: 1 MRTLVTGGAGFMPSHMCDLLLSKGH-EVVCVDNLVTGNMDNMAHHMADKDNFTFINHDIS 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + D I + A+ + + + + +GT ++ L Sbjct: 60 -----KPLFLDEDIDYIFHMASPASPVDYLEFPIQTLKVGALGT----------YNMLGL 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + + Y P Y K ++ + +A+ Sbjct: 105 AKEKGARILLASTSEVYG--DPLVNPQPEEYWGNVNTIGPRGVYDEAKRYAEAITMAYHR 162 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + I + N YGP +++P + + ++G + +YGDG R + YV D V Sbjct: 163 YHNIDTRIVRIFNTYGPRMRGNDGRVVPNFVNQALKGEDITVYGDGSQTRSFCYVSDEVE 222 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPG 289 +Y ++ + NIG NE ++ + +I + S + +I +D P Sbjct: 223 GIYRLMMSDYC-DPVNIGNPNEISVLEFA-------ETVIELTGSSSNIIYCDLPQDDPK 274 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R D +K K +GW P+ +++ GL KTV ++ Sbjct: 275 VRRP---DITKAKKLLGWEPKVDLQDGLEKTVEYF 306 >gi|256375867|ref|YP_003099527.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM 43827] gi|255920170|gb|ACU35681.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM 43827] Length = 324 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 145/346 (41%), Gaps = 56/346 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAG IGS + LV++ +++V+D L G + +L S F++ DI D Sbjct: 7 RVLITGGAGLIGSTIADQLVDEGVAEIVVLDNLVR-GRMANLATADASGKVRFVEGDIRD 65 Query: 62 RECIRSALKE----FQPDA--IVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 E ++S + F A I A E + +L GTF +LE Sbjct: 66 VELVKSTMDGVDLLFHQAAIRITQCAEEPRLAHDVLAT---------GTFTVLE------ 110 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED-MPYNPSSPYSATKASSDYLVLAWGHT 174 + +K + + S+ VYG + ED P+ + Y A K ++ L+ ++ Sbjct: 111 ---AAVEKKVTKVVAASSASVYGLAEVFPTEEDHHPFGNRTLYGAAKVYNEGLLRSFNEM 167 Query: 175 YGIPVLLSNCSNNYGPYH-----FPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 +G+ + N YGP + E L+ + R+ EG+ + GDG D++Y D Sbjct: 168 HGLDYVGLRYFNVYGPRMDVFGVYTEVLVRW-MERIAEGTPPLILGDGSQTMDFVYSTDI 226 Query: 230 VRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 RA L K E +N+ E + L DAL+ E++ + RP Sbjct: 227 ARANVLAAKSDASDEIFNVASGVETS-------LAQLADALL-------EVMGRSDLRPE 272 Query: 290 HD---------RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 H RR A + K IG+ ++ GL + V W+ D Sbjct: 273 HGPERKVNAVPRRLA-STKAAKDRIGFEATTSLHEGLTRLVAWWQD 317 >gi|238762931|ref|ZP_04623899.1| UDP-glucose 4-epimerase [Yersinia kristensenii ATCC 33638] gi|238698942|gb|EEP91691.1| UDP-glucose 4-epimerase [Yersinia kristensenii ATCC 33638] Length = 336 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 35/272 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M ++VTGGAG+IGS L+ + K V+V+D L+ A + SL +SQ + +F Q D Sbjct: 1 MTILVTGGAGYIGSHTVLTLLENGK-DVVVLDNLSNA-SAESLLRVSQITGRMATFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +C++ E + DA+++FA V S++ E+ N+ G+ +LLEE + Sbjct: 59 VLDSDCLKQIFSEHKIDAVIHFAGLKSVGESVVKPIEYYQNNVTGSIVLLEEMVI----- 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-PYSATKASSDYLV--LAWGHT- 174 D + + S+ VYG + +ED ++ PY ++K + ++ ++ H Sbjct: 114 ----ADVKKLIFSSSATVYGDPEFVPLTEDARIGGTTNPYGSSKVMVEQILKDFSFAHPD 169 Query: 175 YGIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQ 218 + I L ++ S G P P L+P IT++ G + +YG DG Sbjct: 170 FSIRALRYFNPVGAHTSGLIGEDPNGKPNNLLPF-ITQVAIGKLPKLAVYGDDYPTTDGS 228 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIGER-YNIG 249 VRD+++V D L K G + YN+G Sbjct: 229 GVRDYIHVMDLAEGHICALNKLTAGFKVYNLG 260 >gi|241203191|ref|YP_002974287.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857081|gb|ACS54748.1| GDP-mannose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 360 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 145/343 (42%), Gaps = 55/343 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 R ++TG G GS L L+ +V I + T N + + + Q +N L Sbjct: 3 RALITGITGQDGSYLAELLIEK-GYEVHGIKRRTSLFNTDRIDHLYQDPHDTNRRLVLHY 61 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ QPD I N AA+SHV S + ++ +G +LE R+ Sbjct: 62 GDMTDSSSLVRIVQQVQPDEIYNLAAQSHVAVSFEEPEYTANSDALGALRILEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I A+ R+ G LY G+ RDW + +D+V Sbjct: 176 IYACNGILFNHESPVRGETFVTRKITRALARIKLGLQDCLYLGNLDAKRDWGHAKDYVEM 235 Query: 233 LYLVLKKGR-------IGERYNI------------------GGNNERKNIDIVFEIGFLL 267 +L+L++ G +Y++ G E K D E G + Sbjct: 236 QWLMLQQDEPEDFVIATGVQYSVREFVDAAAHEIGLPISWKGSGAEEKGYD---ENGRCI 292 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 A+ P+ + TE+ + D SK K ++GW P+ Sbjct: 293 VAVDPRYFRPTEVETLLG-----------DPSKAKEKLGWEPR 324 >gi|210613704|ref|ZP_03289843.1| hypothetical protein CLONEX_02050 [Clostridium nexile DSM 1787] gi|210151043|gb|EEA82051.1| hypothetical protein CLONEX_02050 [Clostridium nexile DSM 1787] Length = 338 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 67/364 (18%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ------SNLFSF 54 M ++VTGGAG+IGS C L++ V+V+D L NS KE F Sbjct: 1 MTILVTGGAGYIGSHTCIELIS-AGYDVVVVDNLC-----NSCKEALDRVEKIVGKTIKF 54 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 + DI D E +++ ++ DA+++FA V S+ E+ NI GT +L + R Sbjct: 55 YEADIRDAEAMKNIFEKEDIDAVIHFAGLKSVGESVAKPLEYYDNNIAGTLVLCDAMR-- 112 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGH 173 + S+ VYG +E+ P ++PY +K+ + ++ H Sbjct: 113 -------NAGVKNIIFSSSATVYGDPAFVPITEECPKGQCTNPYGWSKSMLEQILTDL-H 164 Query: 174 T-----------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYG--- 215 T Y PV ++ S G P P L+P IT++ G + ++G Sbjct: 165 TADSEWNVVLLRYFNPV-GAHKSGTIGENPKGIPNNLMPY-ITQVAVGKLECLGVFGDDY 222 Query: 216 ---DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLD 268 DG VRD+++V D HV+AL + +K + + YN+G N +D+V G Sbjct: 223 DTPDGTGVRDYIHVVDLALGHVKALKKIEEKAGV-KVYNLGTGNGYSVLDMVKAFGKACG 281 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNN 328 IP + RPG D +K K E+GW E GL++ +++ Sbjct: 282 KEIP--------YQIKARRPGDIASCYADPTKAKEELGWV----AERGLDEMC----EDS 325 Query: 329 WWWR 332 W W+ Sbjct: 326 WRWQ 329 >gi|288904421|ref|YP_003429642.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus UCN34] gi|306830454|ref|ZP_07463624.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977418|ref|YP_004287134.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731146|emb|CBI12692.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus UCN34] gi|304427479|gb|EFM30581.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177346|emb|CBZ47390.1| galE [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 332 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 54/350 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV +V+V+D L G+ ++ + +F Q D+ Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEKGDEKVVVVDSLV-TGHRAAVHPDA-----TFYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLE---ETRLWW 115 D++ +R E P DA+++FAA S V S+ ++ N G LLE E + + Sbjct: 55 DQDFMRKVFTE-NPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNEFGVKY 113 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 S ST YG D+ E P P +PY +K + ++ Y Sbjct: 114 IVFS------------STAATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPEK-LIPLAITRMIEG--SHVFLYG------DGQ 218 GI P+ N + + G H PE L+P+ I ++ +G + ++G DG Sbjct: 162 GIKFVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGNDYNTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 NVRD+++ D A L L++G +N+G + N+ I+ + IP Sbjct: 221 NVRDYVHPFDLADAHLLAVKYLREGNPSTAFNLGSSTGFSNLQILEAARKVTGKEIPAEL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K + +GW PQ +++E + W+ Sbjct: 281 A--------DRRPGDPDTLIASSDKAREVLGWKPQFDDIEKIIASAWAWH 322 >gi|193215765|ref|YP_001996964.1| GDP-mannose 4,6-dehydratase [Chloroherpeton thalassium ATCC 35110] gi|193089242|gb|ACF14517.1| GDP-mannose 4,6-dehydratase [Chloroherpeton thalassium ATCC 35110] Length = 375 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 40/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 + ++TG G GS L +L+ +V I + N + I Q + F Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASLFNTQRVDHIYQDLHEENTRFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L+E QPD + N A+SHV S + + +GT LLE R Sbjct: 62 GDLTDTSNLTRILQEVQPDEVYNLGAQSHVAVSFESPEYTADVDALGTLRLLEAIRFL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +Y Sbjct: 120 ----GLENKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYN 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I +T + +G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRGLTNIAQGLEKCLYMGNLASLRDWGHAKDYVRM 235 Query: 233 LYLVLKKGR-------IGERYNIG----------GNNERKNIDIVFEIGFLLDALIPKSY 275 +++L++ G +Y++ G R D V EIG ++DA+ + Sbjct: 236 QWMMLQQDTPEDFVIATGYQYSVRQFIEWSAKKLGIALRFEGDGVDEIG-VIDAITGEDA 294 Query: 276 SHTELIRFIED------RPGHDRRYAIDSSKIKSEIGWFPQ 310 ++ I RP D +K K ++GW P+ Sbjct: 295 PALKVGDVIVRVDPRYFRPAEVETLLGDPTKAKQQLGWTPK 335 >gi|221233409|ref|YP_002515845.1| GDP-mannose 4,6 dehydratase [Caulobacter crescentus NA1000] gi|220962581|gb|ACL93937.1| GDP-mannose 4,6 dehydratase [Caulobacter crescentus NA1000] Length = 358 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS----NLFSFLQV-D 58 ++TG G G+ L L++ V + + + + N ++ I Q N FL D Sbjct: 11 LITGVTGQDGAYLSELLLSK-GYTVHGVKRRSSSFNTGRIEHIYQDPHEPNPRFFLHYGD 69 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +++ QPD I N AA+SHV S + + GT LLE R+ L Sbjct: 70 MTDSTNLIRIVQQTQPDEIYNLAAQSHVQVSFETPEYTSNADATGTLRLLEAIRI----L 125 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK +F Q ST E+YG + + SE P+ P SPY+A K ++V+ + YGI Sbjct: 126 GLEKKT--KFYQASTSELYGLVQEVPQSEKTPFYPRSPYAAAKLYGYWIVVNYREAYGIH 183 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ + +G LY G+ RDW + ++VR ++ Sbjct: 184 ASNGILFNHESPLRGETFVTRKITRAVAAIKQGFQDKLYLGNLDAKRDWGHAREYVRGMW 243 Query: 235 LVLKK 239 L+L++ Sbjct: 244 LMLQQ 248 >gi|78357942|ref|YP_389391.1| GDP-mannose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220347|gb|ABB39696.1| GDP-mannose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 361 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 48/282 (17%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + + +GT +LE R+ Sbjct: 63 DLSDSTNLIRIIQEVQPDEIYNLAAQSHVQVSFDSPEYTANVDALGTLRILEAIRI---- 118 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E++G + + +E P+ P SPY+ K + ++ + + YG+ Sbjct: 119 LGLEKKT--RFYQASTSELFGQVQEIPQTEKTPFYPRSPYACAKLYAYWICVNYREAYGM 176 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I A+ R+ G LY G+ +RDW + +D+V Sbjct: 177 YACNGILFNHESPIRGETFVTRKITRALARIKLGLQDRLYLGNMNALRDWGHAKDYVEMQ 236 Query: 234 YLVLKKG-------RIGERYNI------------------GGNNERKNIDIVFEIGFLLD 268 +L+L++ GE++++ G E K D G + Sbjct: 237 WLMLQQDAPQDFVIATGEQHSVREFVELAATELGISIEWRGYGEEEKGYDTA--TGKCIV 294 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 A+ K Y TE+ + D +K K E+GW P+ Sbjct: 295 AVDKKYYRPTEVETLLG-----------DPAKAKKELGWVPR 325 >gi|77460056|ref|YP_349563.1| UDP-galactose 4-epimerase [Pseudomonas fluorescens Pf0-1] gi|77384059|gb|ABA75572.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens Pf0-1] Length = 342 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 47/349 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGN--LNSLKEISQSNLFSFLQVD 58 M+++VTGGAG+IGS L+ + +V+V+D L + + L++++ I + ++ D Sbjct: 5 MKILVTGGAGYIGSHTTLALL-EAGYEVVVLDNLCNSSDAALHAVEAICGKSAL-MIRGD 62 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 +CDR + ++ DA+++FA V S+ E+ TN+ G+ L C Sbjct: 63 VCDRALLDRIFQQHAIDAVLHFAGLKAVGESVRKPLEYYETNVSGSITL---------CQ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-NPSSPYSATKASSDYLVLAWGHT--- 174 + FR + S+ VYG + ED P P++PY +K + ++ + Sbjct: 114 AMAAAGVFRLVFSSSATVYGEPAQMPIREDFPTGTPTNPYGQSKLIVENVLRDLCQSEPR 173 Query: 175 YGIPVLL------SNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQ 218 + I +L ++ S G P P L+P I+++ GS + ++G DG Sbjct: 174 WSIALLRYFNPIGAHHSGQMGEDPNGIPNNLVPY-ISQVAVGSLKELSIFGDDYPTVDGT 232 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D H++AL + + I +N+G + + ++ +P Sbjct: 233 GVRDYIHVVDLADGHLKALQAIADRTGI-HTWNLGTGDGYSVLQVLRAFEQACGQPVP-- 289 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 R + R G D+SK E+GW N++ + T W Sbjct: 290 ------YRVMPRRSGDIAESWADASKAAKELGWKATRNLQDMVTDTWRW 332 >gi|329891309|ref|ZP_08269652.1| protein capI [Brevundimonas diminuta ATCC 11568] gi|328846610|gb|EGF96174.1| protein capI [Brevundimonas diminuta ATCC 11568] Length = 339 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 120/244 (49%), Gaps = 19/244 (7%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSF-----LQV 57 ++VTG AGFIG R L+ + +V+ +D L A +LK+ + L ++ + Sbjct: 5 VLVTGSAGFIGFHTARRLLERGE-RVIGLDNLN-AYYDPALKQARLAQLQAYPNYRHYTL 62 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DR+ + + E +P +V+ AA++ V S+ + ++ +N++G +LE R + Sbjct: 63 DLADRDGVAALFAEHKPRRVVHLAAQAGVRYSLEAPETYVDSNVVGFLSILEGCRAVEAA 122 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + ST V+G+ FS P + P + Y+ATK +++ + ++ H +G Sbjct: 123 ---------NLVFASTSSVFGANRALPFSVRQPADHPLTVYAATKLANEAMAHSYAHLFG 173 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI-EGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 P YGP+ P+ + TR I + + +YG+G+ RD+ YV+D V + Sbjct: 174 FPATGLRFFTVYGPWGRPDMAL-FKFTRAILKDEPIDVYGEGRMSRDFTYVDDIVTGVIA 232 Query: 236 VLKK 239 L + Sbjct: 233 ALDR 236 >gi|219848933|ref|YP_002463366.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543192|gb|ACL24930.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 322 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 25/331 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ +TG G +GS L YL+ + + + + + ++ + + + DI Sbjct: 1 MRVFITGITGPVGSFLADYLLTIPGLDIHAFKR--WRSDPRPIEHLLSK--ITIHEGDIE 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A+ +PD I + AA+S+ S + N+ GT +LE R Sbjct: 57 DAFSVDRAIAAARPDRIFHLAAQSYPSASWDAPILTMRANVEGTINVLEAAR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R T YG + D+ E+ P P+SPY +K +++ L + +YG+ Sbjct: 109 RHVPHARIHIAGTSAEYGPVRPDEVPIREEHPLRPASPYGVSKVAAELSGLQYHASYGLH 168 Query: 179 VLLSNCSNNYGPYHFPEKLI-----PLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 V+++ N+ GP I +A+ S V G+ RD+ + D RAL Sbjct: 169 VVVTRSFNHVGPRQGDRCSIQTFCRQMALIEAGRQSPVIYVGNLSPRRDFTHTRDVARAL 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L+L+ G GE YN+ + DIV + + +P + H + R RP + Sbjct: 229 WLLLEHGTPGEVYNLCSGRAVRIGDIVDMVVAM--GRVPVTV-HVDPARL---RPVDEPI 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D+SK+++ GW P+ +E + + + ++ Sbjct: 283 LQGDNSKLRAVTGWQPEIGIEQIVAEVLAYW 313 >gi|37788081|gb|AAO37691.1| GDP-mannose 4,6-dehydratase [Escherichia coli] Length = 374 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ + +V I + + N + I Q + F D Sbjct: 8 LITGVTGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 66 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 67 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 122 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 123 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 180 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 181 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 240 Query: 235 LVLKK 239 ++L++ Sbjct: 241 MMLQQ 245 >gi|182435277|ref|YP_001822996.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463793|dbj|BAG18313.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 336 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 48/356 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++TGGAG+IGS + R + + V V D L+ ++ F+ Sbjct: 1 MTWLITGGAGYIGSHVVRAMTAAGE-TVAVYDDLSTGDRERVPDDVP------FVHGSTL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R +++ +V+ AA+ V S+ + N+ G +LLE + Sbjct: 54 DAVGLRRVMRDLSVRGVVHLAAKKQVAESVERPLHYYRENVEGLRVLLE---------AA 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 FL S+ VYG D L +ED P P +PY TK + ++LV + G +G+ Sbjct: 105 ADSGVGSFLFSSSAAVYGMPDVALVTEDTPCAPINPYGETKLAGEWLVRSVGRAHGMATA 164 Query: 181 ---LSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N + P H + L+P+ ++ +G+ ++G DG VRD+++V+ Sbjct: 165 SLRYFNVAGAAAP-HLADAGVFNLVPMVFEKLSQGAAPVVFGTDYDTADGTCVRDFIHVD 223 Query: 228 D-----HVRALYLVLKKGRIGERYNIG---GNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 D A LV + NIG G + R+ I ++ E+ A P S Sbjct: 224 DIASAHLAAARALVGRGPGSDLTVNIGRGQGVSVREMIALIGEVTGYSSAAEPVSAPR-- 281 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKT-VCWYLDNNWWWRPL 334 RPG R + I+ E+ W ++ + W L + WR L Sbjct: 282 -------RPGDPARVVASADLIREELDWSASHDVRQMVESAWAGWCLRHPAAWRDL 330 >gi|13477054|ref|NP_108625.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] gi|14027818|dbj|BAB54411.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] Length = 310 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/336 (22%), Positives = 137/336 (40%), Gaps = 33/336 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +V GG GFIGS +CR L + +T G + + + ++ + D D Sbjct: 4 KCLVLGGGGFIGSNICRRLSAEGL-------SVTAFGRRKGIAPLPRE--IAWFEGDFRD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + AL+ D +++ + + I ++I + LL+ +C+ Sbjct: 55 NLAVTKALQSH--DTVIHLVHSTWPSTADADMAADIRDSVIPSVELLD------ACVRSG 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K F T VYG +D+ ED P NP Y +K ++ V + YG+ + Sbjct: 107 VKRIIYFSSGGT--VYGEVDEIPIREDSPTNPVGAYGVSKLMIEHYVRLYERKYGLNSFI 164 Query: 182 SNCSNNYGPYHFP---EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLK 238 +N +GP+ + L+ A + V +YGDG RD++YVED + ++ Sbjct: 165 VRLANPFGPWQVEAHNQGLVAFAGHLIQSDRQVTVYGDGSARRDYVYVEDVANFVARLIN 224 Query: 239 KGRIGERYNIGGNNERKNI-DIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 +N+GG ++I D++ I S +I+ RP + Sbjct: 225 YNGAKRTFNVGGGGNGQSILDVIHA--------IETSLGKRAMIKREPSRPFDVPSNVLS 276 Query: 298 SSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRP 333 + + E+GW P + G++ T+ W ++ RP Sbjct: 277 IERAEKELGWRPATSFPDGIDYTLSW--QREFYARP 310 >gi|298676145|ref|YP_003727894.1| NAD-dependent epimerase/dehydratase [Methanohalobium evestigatum Z-7303] gi|298289133|gb|ADI75098.1| NAD-dependent epimerase/dehydratase [Methanohalobium evestigatum Z-7303] Length = 294 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 42/324 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAGFIGS + Y +++ V ++D L+ Y N+ E +++S + D Sbjct: 1 MNILVTGGAGFIGSHIAEYFLSEGH-NVRIVDNLSSGYQENIPESAEFVNEDIYS-VSPD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + D + + AA V S +E N +GT +L+ Sbjct: 59 VFE-----------GVDYVFHEAALVSVPVSCQQPEEAFRINTLGTMNVLQN-------- 99 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 S D + + + S+ VYG+ EDM P+SPY+ +K +YL + H G+ Sbjct: 100 SLDAGVE-KVVLASSAAVYGNNPILPKMEDMLPEPASPYAISKMDCEYLAGMF-HDKGLR 157 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N YGP P +IP+ + R EG + +YGDG RD++ ++D VRA Sbjct: 158 TTCLRYFNVYGPRQDPNSPYAAVIPIFMKRAKEGKDLVIYGDGTQTRDFVNIQDVVRANV 217 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + G G+ +N+ + + + +I + S ++++ + E+R G + Sbjct: 218 AAMDNGD-GDVFNVATGTS-------VSVQEIAETIIEITGSSSDIV-YEEEREGDIKDS 268 Query: 295 AIDSSKIKSEIGWFPQE-NMESGL 317 D SKI GW+ + ++E GL Sbjct: 269 VADVSKIS---GWWESKVDLEEGL 289 >gi|72160573|ref|YP_288230.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Thermobifida fusca YX] gi|71914305|gb|AAZ54207.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) [Thermobifida fusca YX] Length = 319 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 144/335 (42%), Gaps = 35/335 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+ +VTGGAGFIGS LC YL + QV V+D L+ G+ +L +++ + F F++ I Sbjct: 1 MKALVTGGAGFIGSHLCDYLTSQGH-QVTVLDDLS-TGSKENLAQLAAAPNFEFVEGSIL 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + D + + AA V + E + N+ GT ++E Sbjct: 59 DTALVDKLVGSC--DTVFHLAAAVGVHTIVDKPLESLRVNLHGTENVVEAA--------- 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP------YSATKASSDYLVLAWGHT 174 + R + ST EVYG D +ED SP Y+A K + + +G Sbjct: 108 -ARHGARIMVASTSEVYGKNDADGLTEDADRILGSPLKSRWSYAAAKGLDELVAYVYGKE 166 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 GIP ++ N GP ++P +++ + + +YGDG R + V D V A Sbjct: 167 TGIPTVIVRFFNIVGPRQTGRYGMVVPRFVSQALANEPITVYGDGTQRRCFGSVFDVVPA 226 Query: 233 LY-LVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDAL--IPKSYSHTELIRFIED 286 + L+ + N+GG E R + V E+ + IP ++ E ED Sbjct: 227 VVKLMDTPAAYNQAVNLGGMEEISIRGLAERVIELTGSSSTIEYIPYEKAYGE---GYED 283 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 RR D+S K IG+ P ++ +N + Sbjct: 284 M----RRRMPDTSLAKKLIGYEPTRRLDDIINSII 314 >gi|257228936|gb|ACV52985.1| GDP-D-mannose dehydratase [Yersinia pseudotuberculosis] Length = 373 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 16/247 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV-D 58 ++TG G GS L +L+ + +V I + + N + + I Q +N FL D Sbjct: 6 LITGITGQDGSYLSEFLL-EKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N A+SHV S + + +GT LLE R+ Sbjct: 65 LTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI----- 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +++ RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 120 -NGLENKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ + G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKKGR 241 ++L++ + Sbjct: 239 MMLQQDK 245 >gi|15606348|ref|NP_213727.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] gi|2983546|gb|AAC07120.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] Length = 327 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/362 (25%), Positives = 156/362 (43%), Gaps = 66/362 (18%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAG+IGS + + L + +VL+ D L+ L ++ D+ D Sbjct: 3 KVLVTGGAGYIGSHVVKAL-GEKGYEVLIYDNLSTGNEWAVL-------YGKLVKADLAD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E +R +EF+PDA+++FAA V S+ ++ N++ T LLE + + Sbjct: 55 KETLRRVFEEFKPDAVMHFAAYIVVPESVKEPLKYYRNNVVNTINLLE-------VMQEF 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD--------------YL 167 ++F F S+ VYG + ED P NP +PY TKA+ + Y+ Sbjct: 108 GVNKFVFS--SSAAVYGIPESIPVKEDAPLNPINPYGETKATVERILRDLKNSGKDFNYV 165 Query: 168 VLAWGHTYGIPVLLSNCSNNYG-PYHFPEKLIPLAI-TRMIEGSHVFLYG------DGQN 219 L + + G ++ G Y P LI A+ T E + +YG DG Sbjct: 166 SLRYFNVAG-----ADPEGKIGFAYPNPTHLIIRAVKTAAGEFDRLEIYGTDYPTPDGTC 220 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +RD+++V D H+ AL + G+ E N G + +++V + + + Sbjct: 221 IRDYIHVTDLAEAHILALEYLFSGGK-SEVLNCGYGHGYSVLEVVNAVKKVTGV----DF 275 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWYLDNNWWWRPL 334 E R R G D+ KIK + W P+ +++E + + W W Sbjct: 276 KVVEAPR----REGDPPALVADNKKIKRVLNWEPKYDDLE--------FIIKTAWEWEKK 323 Query: 335 YK 336 +K Sbjct: 324 FK 325 >gi|254442580|ref|ZP_05056056.1| hypothetical protein VDG1235_813 [Verrucomicrobiae bacterium DG1235] gi|198256888|gb|EDY81196.1| hypothetical protein VDG1235_813 [Verrucomicrobiae bacterium DG1235] Length = 352 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 141/335 (42%), Gaps = 46/335 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA------GNLN-SLKEISQS-NLFSF 54 ++VTG +G IGS +C Y +L + ID A G+ + K +SQ + F Sbjct: 5 ILVTGSSGLIGSEVCTYFSQELGYAIHGIDNNQRAVFFGPQGDTRWNQKRLSQKLSNFHH 64 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 ++DI +R + LK +P+AIV+ AA+ DR+ + TN GT LLE R Sbjct: 65 HEIDIRNRPQVLDLLKTLKPNAIVHAAAQPSHDRAAKIPFDDFDTNAGGTLNLLEAAR-- 122 Query: 115 WSCLSQDKKDQFRFLQISTDEVYG---------------SLDKGLFSEDMP------YNP 153 Q D F+ +ST++VYG + +P + Sbjct: 123 -----QHAPDA-PFIHMSTNKVYGDAPNRIPLVEHKTRYDFADSTYQNGIPESFTIDQSK 176 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKL---IPLAITRMIEGSH 210 S + A+K + D +V +G +G+P GP H +L + + +E Sbjct: 177 HSLFGASKVAGDVMVQEYGRYFGMPTCCLRGGCLTGPNHAGVELHGFLSYLVKANVEERE 236 Query: 211 VFLYG-DGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDA 269 ++G G+ VRD ++ D R + R GE YNIGG +KN + E +++ Sbjct: 237 YKIFGYQGKQVRDNIHSFDVARFMSAFADAPRSGEVYNIGGG--KKNSCSILEAFQIVER 294 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSE 304 L K H E+R G Y D K+KS Sbjct: 295 LTSKPMRHKYS---AENRIGDHICYYSDLRKMKSH 326 >gi|257054156|ref|YP_003131988.1| GDP-mannose 4,6-dehydratase [Saccharomonospora viridis DSM 43017] gi|256584028|gb|ACU95161.1| GDP-mannose 4,6-dehydratase [Saccharomonospora viridis DSM 43017] Length = 331 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 19/320 (5%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--FSFLQVDI 59 R ++TG G G L L++ +V + K G N E Q+ L + D+ Sbjct: 3 RALITGITGQDGQYLAE-LLHSKNYKVFGLIK----GQNNPKLEALQTELPFVELVSGDL 57 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +AL++ QPD + N A S V S A+ +G LLE R+ + Sbjct: 58 QDLSSLVAALEQVQPDEVYNLGAISFVGLSFKQAELTANVTGLGVLRLLEAIRM----VG 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 + + RF Q S+ E++G + + E P+ P SPY K + + + +YG+ Sbjct: 114 GSQNNPIRFYQASSSEMFGKVRESPQVETTPFYPRSPYGCAKVFGHDITVNYRDSYGLFA 173 Query: 180 LLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALYL 235 N+ P F + + A+ R+ G + GD + RDW + D+V+A++L Sbjct: 174 CSGILFNHESPRRGLEFVTRKVTNAVARIKLGLQDTLVLGDLEPRRDWGFAGDYVKAMWL 233 Query: 236 VLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYA 295 +L++ + G ++ E F + T+ RF RP Sbjct: 234 MLQQDEPSDYVVATGRTH--SVREFVEAAFRHAGIDDWERYVTQDERFF--RPAEVDLLV 289 Query: 296 IDSSKIKSEIGWFPQENMES 315 D++K ++E+GW P+ + ES Sbjct: 290 GDATKARTELGWKPEVDFES 309 >gi|254421605|ref|ZP_05035323.1| NAD dependent epimerase/dehydratase family [Synechococcus sp. PCC 7335] gi|196189094|gb|EDX84058.1| NAD dependent epimerase/dehydratase family [Synechococcus sp. PCC 7335] Length = 321 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 35/329 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L++ +V+ +D Y G+ ++ + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLMS-ANHEVICLDNF-YTGHKRNILRWMDNPYFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D I + A + + + TN++GT + L Sbjct: 59 --EPIR-----LEVDQIYHLACPASPVHYQYNPVKTVKTNVVGTL----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + RF ST EVYG + E+ P S Y K ++ L + Sbjct: 102 AKRVKARFFLASTSEVYGDPEVHPQPEEYRGSVNPIGIRSCYDEGKRMAETLSFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 + + + N YGP +++ I + + G + +YGDG R + YV D V Sbjct: 162 DVDIRVVRIFNTYGPRMLENDGRVVSNFIVQALSGQPLTVYGDGSQTRSFCYVSDLVEGF 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G NIG E + + I +++ + Y +D P +R Sbjct: 222 IRLMNSEHTGP-INIGNPGEYTILQLAQTIQKMVNPDVEVQYRP-----LPQDDP---KR 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVC 322 D +K + +GW P ++E+GL KT+ Sbjct: 273 RKPDITKAEKLLGWQPTVDLEAGLEKTIA 301 >gi|310827986|ref|YP_003960343.1| hypothetical protein ELI_2398 [Eubacterium limosum KIST612] gi|308739720|gb|ADO37380.1| hypothetical protein ELI_2398 [Eubacterium limosum KIST612] Length = 375 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 39/348 (11%) Query: 2 RLIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 ++ VTG GF GS LC L + ++ + T +L SL + Q + D+ Sbjct: 14 KVFVTGHTGFKGSWLCHILKLAGAEVMGYSLAPQTKP-DLFSLSGLDQDPHIQTVIGDVR 72 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + E ++ A+ FQP+ +++ AA+ V S TN++GT +LE R S S Sbjct: 73 NLEKLKKAMTAFQPEIVIHMAAQPIVRDSYKDPVYTYETNVMGTVNILEAVRCCPSVRS- 131 Query: 121 DKKDQFRFLQISTDEVYGSLD-KGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 FL ++TD+VY + + + E+ P + PYS +K+ S+ + ++ ++ Sbjct: 132 -------FLNVTTDKVYENKEWPWGYRENEPLDGYDPYSNSKSCSELVTHSYKKSFFNGA 184 Query: 176 ---------GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLY 225 G V + N G F ++++P + ++G + L + + R + + Sbjct: 185 DQALKTESGGTAVSTARAGNVIGGGDFANDRIVPDCVCSALKGETI-LVRNPNSTRPYQH 243 Query: 226 VEDHVRALYLVLKK----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V + + A L+ +K + + YN+G + G L+D + T Sbjct: 244 VLEPLFAYLLIAQKQYEDSALADYYNVGPDETD-----CITTGELVDLFCRQWQQQTGES 298 Query: 282 RFIE----DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + E D P +D SKIKS +GW P+ N+ ++KTV W + Sbjct: 299 QSWENQQVDGPHEANFLKLDCSKIKSRLGWRPRWNVAQAVSKTVEWTI 346 >gi|317130379|ref|YP_004096661.1| UDP-glucose 4-epimerase [Bacillus cellulosilyticus DSM 2522] gi|315475327|gb|ADU31930.1| UDP-glucose 4-epimerase [Bacillus cellulosilyticus DSM 2522] Length = 335 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/351 (25%), Positives = 151/351 (43%), Gaps = 48/351 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVDIC 60 ++VTGGAG+IGS C L+N ++V+D + + S+K I + F + D+ Sbjct: 2 ILVTGGAGYIGSHTCVELLN-AGHDIIVLDNFSNS-KYESIKRIQELTGKEFKVYEADLL 59 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+E + + E +A+++FA V S+ + NI GT L E Q Sbjct: 60 DKEALANIFNENDIEAVIHFAGLKAVGESVAIPLHYYHNNITGTLHLCE----------Q 109 Query: 121 DKKDQFRFLQISTDE-VYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AWG 172 KK + + S+ VYG +K E P + ++PY +K + ++ W Sbjct: 110 MKKHGVKTIVFSSSATVYGMTEKMPIVETDPLSATNPYGRSKLMIEEILRDLYVSDNEWS 169 Query: 173 HT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGS--HVFLYG------DGQN 219 T Y P+ ++ S G P P L+P IT++ G + ++G DG Sbjct: 170 ITLLRYFNPI-GAHESGRIGEDPNGIPNNLMPF-ITQVAIGKRDELKVFGDDYPTEDGTG 227 Query: 220 VRDWLYVEDHVRALYLVLKKGRI---GERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 VRD+++V D + L+K + YN+G N + +V + IP S Sbjct: 228 VRDYIHVVDLAKGHLKALEKAKTTSGAHAYNLGTGNGYSVLQLVNAFEKAANQKIPYS-- 285 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 ++ RPG D +K K E+GW ++ ++ N + W +N Sbjct: 286 ------IVDRRPGDIATCYADPTKAKEELGWTAEKGIDDMCNDSWKWQKNN 330 >gi|157155425|ref|YP_001463384.1| VI polysaccharide biosynthesis protein vipB/tviC [Escherichia coli E24377A] gi|157077455|gb|ABV17163.1| Vi polysaccharide biosynthesis protein vipB/tviC [Escherichia coli E24377A] Length = 343 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/338 (25%), Positives = 153/338 (45%), Gaps = 34/338 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFLQV 57 ++TG AGFIGS L L+ L V+ +D G+ +L E+ Q+ F+ ++ Sbjct: 19 LITGVAGFIGSNLLETLLR-LNQTVVGLDNFA-TGHQRNLDEVQQNVTPEAWQKFTMIEG 76 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTN---IIGTFILLEETRLW 114 DI D E A+ + +++ AA V RSI ++ ITTN + G +L+ + Sbjct: 77 DIRDYETCMKAVDNV--NYVLHQAALGSVPRSI---NDPITTNEVNVSGFLNMLQAAK-- 129 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 C +D F+ ++ YG E P SPY+ TK ++ + Sbjct: 130 --C-----RDVESFVFAASSSTYGDHTALPKIEHTIGKPLSPYAITKYVNELYAEVFAKM 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG + N +G P +IP I+ M+ +++ GDG+ RD+ ++E+ V Sbjct: 183 YGFKSIGLRYFNVFGKRQDPNGAYAAVIPKWISAMLMDKDIYINGDGETSRDFSFIENTV 242 Query: 231 RA--LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + L GE YN+ ER +++ + E F+ + L + I + + R Sbjct: 243 QMNILAATADDSAKGEVYNVA-YGERTSLNELVE--FIKNDLGSNGIKYAGNIIYRDFRK 299 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 G R D SK + +G+ PQ ++++GL + + WY++ Sbjct: 300 GDVRHSLADISKAREMLGYQPQFDIKTGLRQAMPWYIN 337 >gi|56797948|emb|CAI39175.1| GDP-mannose 4,6-dehydratase [Yersinia sp. A125 KOH2] Length = 372 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 18/248 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L L+ D +V I + + + N + + I Q+ F Sbjct: 3 KALITGITGQDGSYLAELLL-DKGYEVHGIQRRSSSFNTSRIDHIFQNYQGADTRFFLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N A+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDTSNLVRLVREIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 119 ---NGFEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 175 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 + +L ++ S G F + I AI + G LY G+ ++RDW + +D+VR Sbjct: 176 MYACNGILFNHESARRGE-TFVTRKITRAIANIALGLQECLYLGNIDSLRDWGHAKDYVR 234 Query: 232 ALYLVLKK 239 +L+L++ Sbjct: 235 MQWLMLQQ 242 >gi|301062682|ref|ZP_07203300.1| GDP-mannose 4,6-dehydratase [delta proteobacterium NaphS2] gi|300443205|gb|EFK07352.1| GDP-mannose 4,6-dehydratase [delta proteobacterium NaphS2] Length = 361 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 28/342 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 R ++TG G G+ L L+ +V I + N + + + Q F Sbjct: 3 RALITGITGQDGAYLAELLLKR-NYEVHGIKRRASQFNTDRIDHLYQDPHESDRKFVLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + +++ QPD I N AA+SHV S + + +GT LLE R+ Sbjct: 62 GDLTDSTNLIRIVQQVQPDEIYNLAAQSHVQVSFETPEYTANADALGTLRLLEAIRI--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK +F Q ST E+YG + + SE P+ P SPY+A K + ++ + + YG Sbjct: 119 -LGLEKKT--KFYQASTSELYGLVQETPQSEKTPFYPRSPYAAAKLYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + R+ G LY G+ RDW + D+V Sbjct: 176 IFGCNGILFNHESPIRGETFVTRKITRGLARIKLGFQDCLYLGNLDGKRDWGHARDYVEL 235 Query: 233 LYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT--ELIRF 283 ++L+L++ + G+++++ ++ F+I + + + K Y + I Sbjct: 236 MHLMLQQDQPKDYVIATGQQFSVRDFVNVAGKEVGFDIRWEGEGIDEKGYEQQTGKCIVA 295 Query: 284 IED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 ++ RP D+ + +GW P+ + + + V Sbjct: 296 VDKRYYRPTEVETLLGDAGLAREALGWKPKTTFQEMVAEMVA 337 >gi|296122213|ref|YP_003629991.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] gi|296014553|gb|ADG67792.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM 3776] Length = 326 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 37/337 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 + +VTGGAGFIGS + R L+N V ++D L+ +N L+ F I D Sbjct: 3 KCLVTGGAGFIGSHMTRALLNAGH-DVTILDNLSTGQEVN-LRPFRDHPRFKLTIGSITD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + + + AA V L AD+ + T I T I E L + Sbjct: 61 SVLLSEVM--LGQEIVFHLAAAVGVK---LVADDPVRT--IQTNIYPTEELLRLAV---- 109 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSE--DMPYNPSS----PYSATKASSDYLVLAWGHTY 175 +++ R ST EVYG K ++E D+ + P+S Y +KA ++L LA+ Y Sbjct: 110 -QNRCRVFMASTSEVYGKNPKERWTEEDDLQFGPTSKPRWAYGCSKAIDEFLSLAYHRKY 168 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 +PV++ N GP+ ++P + + ++G + +Y DG VR + +VE+ VR++ Sbjct: 169 DLPVVIGRFFNVVGPHQIGHYGMVVPRFVDQALKGGPIVIYDDGSQVRCFGHVEEVVRSV 228 Query: 234 Y-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALI--PKSYSHTELIRFIEDRPGH 290 L+ G+ +NIG + V ++ + AL+ P H I + E G Sbjct: 229 IDLMHTPAAFGKVFNIGSDQPVS----VRQLAERVIALVGRPCEIKH---IPYTEAY-GA 280 Query: 291 D----RRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D +R D ++++S +G P ++ L + W Sbjct: 281 DFEDVQRRVPDLTRLESTLGRKPVRTLDDILKDIIQW 317 >gi|110635107|ref|YP_675315.1| NAD-dependent epimerase/dehydratase [Mesorhizobium sp. BNC1] gi|110286091|gb|ABG64150.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1] Length = 330 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 140/333 (42%), Gaps = 37/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V GGAGF+GS LC L+ + +V+ +D G ++ + F ++ DIC Sbjct: 12 RVLVAGGAGFVGSHLCDALLAE-GCKVVCVDSF-LTGAYANIAPLENHGRFQLIRQDICK 69 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L D I N A + + + T+++GT L L+ Sbjct: 70 PLKLEDKL-----DEIYNLACAASPPIYQMDPVHTLMTSVLGTRNL----------LALA 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 +K RFLQ ST EVYG + ED P P + Y K +++ L Sbjct: 115 EKHGARFLQASTSEVYGDPEVHPQPEDYRGNVNPTGPRACYDEGKRAAEALCFDLLRLGR 174 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + ++ N YGP + +++ I + + G + +YG G+ R + +V D VR L Sbjct: 175 VDARVARIFNTYGPRMKADDGRIVSNFINQALRGEPLTIYGTGEQTRSFCHVSDLVRGLV 234 Query: 235 LVLK-KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP--KSYSHTELIRFIEDRPGHD 291 +++ + N+G E V ++ ++ +P K H L +D P Sbjct: 235 ALMEVQPNPKMPINLGNPGEF----TVNQLAAIISESVPGAKGVIHRPL---PQDDP--- 284 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +R D + + + W P+ + GL T+ W+ Sbjct: 285 QRRQPDIRRAEKLLNWSPRIALREGLEDTIAWF 317 >gi|23015346|ref|ZP_00055125.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 337 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQ 56 R ++TG G +GS + +L+ + + + L++L+ + ++ LF Sbjct: 5 RALITGVTGMVGSHMVDFLLENTDWDIW--GACRWRSPLDNLRHLMGRINARDRLF-LTD 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 ++ D + ++E +PD + + AA+S+ S + + TNI+GT LLE R Sbjct: 62 FELRDTISMIRMVEEVKPDYVFHLAAQSYPKTSFTAPLDTLDTNIMGTARLLEALR---- 117 Query: 117 CLSQDKKDQFRFLQISTDEVYGSL--DKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 D ++ EV+G + +K E+ ++P+SPY+ +K +D + + Sbjct: 118 ----PLGDGPVIHVCASSEVFGRVPAEKLPIDEECTFHPASPYAISKVGTDLVGRYYAEA 173 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGS---HVFLYGDGQNVRDWLYVED 228 YG+ V+ + + GP F E I MIE V G+ +++R W V D Sbjct: 174 YGMRVMTTRMFTHTGPRRGDVFAESTFAKQIA-MIEAGIIPPVVKTGNLKSMRTWADVRD 232 Query: 229 HVRALY-LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 VRA Y LV K + G YNIGG D++ + S S + IR +E Sbjct: 233 AVRAYYLLVTKDPQPGAYYNIGGTFSCTVEDMLHHL---------LSLSTVKDIR-VETD 282 Query: 288 PGHDRRYAID-----SSKIKSEIGWFPQENMESGLNKTVCWYLD 326 PG R D ++K ++ GW P E + + ++ D Sbjct: 283 PGRVRPIDADLQVPNTAKFRAHTGWEPVIAFEKTMADLLEYWRD 326 >gi|313683248|ref|YP_004060986.1| nad-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM 16994] gi|313156108|gb|ADR34786.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM 16994] Length = 312 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LCR L+N+ V+ +D + G+ ++ ++ F ++ D+ Sbjct: 4 RILVTGGAGFVGSHLCRRLLNEGN-DVICLDNF-FTGSKENIIDLLPHPYFELIRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I + D I N A + T+++G +L+ R Sbjct: 60 QEPIL-----LEVDEIYNLACPASPPHYQFDPVATTRTSVLGAINMLDIAR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVLAWGHT 174 K + + LQ ST EVYG D + + Y S + Y K ++ L + Sbjct: 106 -KCKAKILQASTSEVYG--DPEVHPQPESYRGSVSTTGIRACYDEGKRCAETLFFDYYRQ 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 +G+ + + N YGPY P+ +++ I + + + +YG G R + YV+D V Sbjct: 163 HGVKIKVIRIFNTYGPYMNPDDGRVVSNFIMQALRNQDITIYGAGTQTRSFQYVDDLVEG 222 Query: 233 LYLVLKK-GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 + ++ NIG E +++ +I L + +Y ++ +P Sbjct: 223 MIRLMNSDDSFTGPVNIGNPGEFTMLELAQKIITLTGSSSKLTYKPLPQDDPLQRQP--- 279 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S K E+ W P +E GL KT+ ++ Sbjct: 280 -----DISLAKKELDWEPTIALEEGLKKTIAYF 307 >gi|256027579|ref|ZP_05441413.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] gi|289765538|ref|ZP_06524916.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] gi|289717093|gb|EFD81105.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] Length = 329 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 141/329 (42%), Gaps = 43/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVVDNLI-TGHVDAVDERAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 HNVDKIVF--SSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L + R G + +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRNGGDSQIFNL-GNGEGFSVKEVIEV-------TRKVTGHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K E+ W P+ Sbjct: 277 ELSPRRAGDPARLIASSKKAIDELKWKPK 305 >gi|260495347|ref|ZP_05815474.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] gi|260197125|gb|EEW94645.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] Length = 329 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 141/329 (42%), Gaps = 43/329 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHIVKYLLEKNE-DVVVVDNLI-TGHVDAVDERAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 HNVDKIVF--SSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L + R G + +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRNGGDSQIFNL-GNGEGFSVKEVIEV-------TRKVTGHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K E+ W P+ Sbjct: 277 ELSPRRAGDPARLIASSKKAIDELKWKPK 305 >gi|227887107|ref|ZP_04004912.1| GDP-mannose 4,6-dehydratase [Escherichia coli 83972] gi|227835457|gb|EEJ45923.1| GDP-mannose 4,6-dehydratase [Escherichia coli 83972] gi|307554125|gb|ADN46900.1| GDP-D-mannose dehydratase [Escherichia coli ABU 83972] Length = 373 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|57641643|ref|YP_184121.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] gi|57159967|dbj|BAD85897.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] Length = 316 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 35/339 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+++VTGGAGFIGS L L+ +V V+D L+ AG+L+++K + F F++ D+ Sbjct: 1 MKVLVTGGAGFIGSHLVDGLMES-GYEVRVLDNLS-AGSLDNVKHWLDNERFEFIKGDMV 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E ++ A++ D + + AA V S + +N+ T+ LLE R Sbjct: 59 DLETVKKAIEGV--DVVFHLAANPEVRISAQSPETLYESNVTITYNLLEAMR-------- 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D + S+ VYG + E P P S Y K +++ ++ + H +G Sbjct: 109 -NSDVEYLVFTSSSTVYGDAEVIPTPESYGPLKPISVYGGAKLAAEAIISGYAHIFGFKA 167 Query: 180 L---LSNC----SNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 L L+N SN+ Y F KL + + + GDG + +L+V D V Sbjct: 168 LSFRLANIIGKRSNHGVIYDFINKLRK-------NPNELEILGDGTQRKSYLHVSDTVEG 220 Query: 233 LYLVL----KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + + K G + YN+ GN++ + + EI L PK + T + Sbjct: 221 MLHIFEHFKKSGETYDVYNL-GNDDWITVKEIAEIVSEEMGLSPK-FRFTGGVDGGRGWK 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 G + +D K KS GW P+ N + +TV L+ Sbjct: 279 GDVKLMLLDIGKAKS-TGWRPKMNSYEAVRRTVKELLEG 316 >gi|310643492|ref|YP_003948250.1| udp-glucose 4-epimerase, gale [Paenibacillus polymyxa SC2] gi|309248442|gb|ADO58009.1| UDP-glucose 4-epimerase, galE [Paenibacillus polymyxa SC2] Length = 329 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 52/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS L+ DL +V+V+D L + G L K + D Sbjct: 1 MAILVTGGAGYIGSHTVAELL-DLGEEVVVLDNLQTGHKGALLGGK---------LYEGD 50 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D+E + E DA+++FAA S V S+ ++ N+ GT LLE + Sbjct: 51 LRDKELLSKLFSENNIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMK------ 104 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + ST YG +K E P++ Y TK + ++ + GI Sbjct: 105 ---DAGVSKIVFSSTAATYGEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIK 161 Query: 179 VLL--------SNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRD 222 + ++ S G H PE LIPL + T + + H+ ++G DG VRD Sbjct: 162 YVSLRYFNAAGAHESGKIGEDHRPESHLIPLVLQTALKQRPHIAVFGEDYATPDGTCVRD 221 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D HVRA+ L++G +N+ GN + ++ V E + L Sbjct: 222 YIHVSDLADAHVRAVNY-LREGNDSNIFNL-GNGQGFSVKEVIETARKVTGL-------- 271 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 ++ E R D + SS K +S +GW P+ Sbjct: 272 DIPVVTEPRRAGDPAILVASSDKARSVLGWSPK 304 >gi|257086425|ref|ZP_05580786.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256994455|gb|EEU81757.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] Length = 329 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLCSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|298528800|ref|ZP_07016204.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] gi|298512452|gb|EFI36354.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] Length = 349 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 53/362 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLV------------NDLKIQVLVIDKLTYAG-----NLNSL 43 M+++VTG AGFIG L LV ND + +L +G + L Sbjct: 1 MKILVTGTAGFIGFRLALALVEKGFEVVGLDNINDYYDVQVKYGRLRESGFQEPYDYGRL 60 Query: 44 KEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIG 103 + SF++ ++ DRE ++ +E N AA++ V S+ ++ +N++G Sbjct: 61 YHSDKYPGLSFIRQNLEDREGMQRLFQEQGFSRACNLAAQAGVRYSLTNPYAYVDSNLVG 120 Query: 104 TFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKA 162 LLE C ++ + F S+ VYG + FS + P S Y+A+K Sbjct: 121 YINLLE-------CCRHNQVEHLVF--ASSSSVYGLNETQPFSVHANVDHPISLYAASKK 171 Query: 163 SSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRD 222 S++ + + H YG+P YGP+ P+ + L M+E + ++ G+ RD Sbjct: 172 SNELMSHTYAHLYGLPCTGLRFFTVYGPWGRPDMALFLFTRAMLEDRPIDVFNHGRMQRD 231 Query: 223 WLYVEDHVRALYLVLKKGRIGER------------------YNIGGNNERKNIDIVFEIG 264 + Y++D V + VL G YNIG NN + +D + Sbjct: 232 FTYIDDIVEGVIRVLDNPPAGNPHWDPKNPDPASSSAPYRLYNIGNNNPVQLMDFI---- 287 Query: 265 FLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + K+ + +PG D + ++ + P+ ++E G+ + V WY Sbjct: 288 ----QALEKALGKKAQKNLLPLQPGDVPSTYADVDDLVRDLDYKPETSVEEGIERFVKWY 343 Query: 325 LD 326 D Sbjct: 344 RD 345 >gi|126010588|gb|ABB04484.1| putative UDP-N-acetyl-glucosamine-4-epimerase [Escherichia coli] Length = 348 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 26/333 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE---ISQSNLFSFLQVD 58 ++TG AGFIGS L L+ L +V+ +D + NL+ +KE Q + F+F++ D Sbjct: 25 LITGVAGFIGSNLLEALLK-LNQKVVGLDNFATGHQANLDEVKESVSAEQWSAFTFVEGD 83 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 IC+ E +K D +++ AA V RSI TNI G +L + Sbjct: 84 ICEPETCVEVVKGV--DHVLHQAALGSVPRSIKDPITTNNTNISGFINML---------V 132 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + F ++ YG E+ NP SPY+ TK ++ + TYG Sbjct: 133 AAKDANVRSFTYAASSSTYGDHPALPKIEENIGNPLSPYAVTKYVNELYAQVFARTYGFK 192 Query: 179 VLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + N +G P +IP MI +++ GDG+ RD+ ++E+ V+ Sbjct: 193 SIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMINDEPLYINGDGETSRDFCFIENVVQMNI 252 Query: 235 LVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 L + + YN+ +R ++ +F + L + L + + + + + R G R Sbjct: 253 LAAQSDASARDQVYNVAV-GDRTTLNQLFNV--LKNTLKNNNVIYEKKPVYKDFRAGDVR 309 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + K K +G+ P ++ G+ +++ WY+ Sbjct: 310 HSQANIDKAKRLLGYVPTHDILDGIKESMPWYI 342 >gi|311108776|ref|YP_003981629.1| VI polysaccharide biosynthesis protein VipB/TviC [Achromobacter xylosoxidans A8] gi|310763465|gb|ADP18914.1| VI polysaccharide biosynthesis protein VipB/TviC [Achromobacter xylosoxidans A8] Length = 341 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 36/337 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS------NLFSFLQV 57 +VTG AGFIGS L L+ L V +D G ++L E+ S F+F++ Sbjct: 20 LVTGCAGFIGSNLLETLLR-LGQTVTGLDNFA-TGFQHNLDEVRDSVTPEQWARFTFIEG 77 Query: 58 DICDRECIRSALK--EFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRL 113 DI D E R A++ EF +++ AA V RS+ + ITTN IG F+ + Sbjct: 78 DIRDLEACRRAVQGVEF----VLHQAALGSVPRSL---KDPITTNEVNIGGFLNM----- 125 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 ++ ++ F+ ++ YG E+ P SPY+ TK ++ + Sbjct: 126 ---LVAARDEEVKSFVYAASSSTYGDHPALPKVEENIGKPLSPYAVTKYVNELYADVFAR 182 Query: 174 TYGIPVLLSNCSNNYGPYHFP----EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 +YG + N +G P +IP MI+ V + GDG+ RD+ +VE+ Sbjct: 183 SYGFETVGLRYFNVFGKRQNPNGAYAAVIPKWTAAMIQNEDVTINGDGETSRDFCFVENA 242 Query: 230 VRALYLVLKKGRIG--ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDR 287 V+A L G + YN+ + R ++ +F GFL+ L + ++ + + + R Sbjct: 243 VQANILAAMAAPEGRNQVYNVAVSG-RSTLNQLF--GFLVQTLGTQGVAYGKKPVYADFR 299 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 G R D SK +G+ P + GL + WY Sbjct: 300 AGDVRHSQADVSKAGRLLGYEPTHTVLQGLEVAMPWY 336 >gi|270291175|ref|ZP_06197398.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] gi|270280571|gb|EFA26406.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] Length = 330 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 141/332 (42%), Gaps = 49/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + + L+ + +V+V+D L+ G+ ++ + ++ F + DI Sbjct: 1 MSILVVGGAGYIGSHMVKRLIEQGQ-EVVVVDNLS-TGHRKAVDKKAR-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + ++ D +V+FAA S V S+ ++ N G LLEE R Sbjct: 54 NHVFLKGVFDRENIDTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D R + ST YG +K E+ P +PY +K + ++ YGI + Sbjct: 106 -DHDVKRIIFSSTAATYGVPEKSPIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFV 164 Query: 181 LSNCSNNYGPY--------HFPEKLIPLAITRMIEGS--HVFLYG------DGQNVRDWL 224 N G Y H PE + I ++ G + ++G DG NVRD++ Sbjct: 165 ALRYFNVAGAYPDGSIGEDHGPETHLTPIILQVAAGQRDQLKIFGDDYNTPDGTNVRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT-EL 280 +V D V A L LK G + +N+G + GF + ++ + T E Sbjct: 225 HVLDLVDAHILAINYLKAGNDSDVFNLGSST-----------GFSVKQMVEAAREVTGEP 273 Query: 281 I--RFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 I E RPG S K + + W PQ Sbjct: 274 IPAEIAERRPGDPDSLIAASQKARDVLQWQPQ 305 >gi|255011099|ref|ZP_05283225.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 3_1_12] gi|313148907|ref|ZP_07811100.1| CDP-glucose 4,6-dehydratase [Bacteroides fragilis 3_1_12] gi|313137674|gb|EFR55034.1| CDP-glucose 4,6-dehydratase [Bacteroides fragilis 3_1_12] Length = 359 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/341 (24%), Positives = 156/341 (45%), Gaps = 35/341 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTG GF GS L +L ++L +V+ + + + N + + + L+ DI D Sbjct: 14 RVLVTGHTGFKGSWLSIWL-HELGAEVIGVAQDPFTARDNFVLSGIGEKIKADLRADIRD 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E I++ +E+QP+ + + AA+ V S E TN++GT +LE R Sbjct: 73 GERIKAIFQEYQPEIVFHLAAQPLVRLSYDIPVETYETNVMGTIHVLEAVR--------- 123 Query: 122 KKDQFRF-LQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTY---- 175 D + + I+TD+ Y + ++ + E+ P PYS++K +++ + +W ++ Sbjct: 124 STDSVKVGVMITTDKCYENKEQIWGYRENEPMGGYDPYSSSKGAAEIAIASWRRSFFHPE 183 Query: 176 -----GIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 G + N G + +++IP I + G+ + + + +R W +V + Sbjct: 184 QYDKHGKSIASVRAGNVIGGGDWALDRIIPDCIKALESGAAIDIRSP-KAIRPWQHVLEP 242 Query: 230 VRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + L+ +K R E +N G E +I V+++ + +Y EL Sbjct: 243 LSGYMLLAQKMWSDPTRYCEGWNFGPRAE--SISTVWDVA----TKVVNNYGSGELRDLS 296 Query: 285 EDRPGHDRR-YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + H+ + +D SK K +GW P+ N+E + TV WY Sbjct: 297 DLHALHEAKLLMLDISKAKFRLGWEPKMNIEQTVELTVDWY 337 >gi|190576397|ref|YP_001974242.1| putative UDP-glucuronic acid epimerase [Stenotrophomonas maltophilia K279a] gi|190014319|emb|CAQ47966.1| putative UDP-glucuronic acid epimerase [Stenotrophomonas maltophilia K279a] Length = 321 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 25/330 (7%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M +++TG AGFIG+ R L+ + V+ +D Y + + + +D Sbjct: 1 MTILLTGAAGFIGAYTARALL-EAGQPVVGLDNFNDYYDPQIKRDRVAALCPALDLRTLD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D++ + + E +P A+++ AA++ V S+ ++ +N++G +LE R Sbjct: 60 LTDQQGLAALFDEVKPTAVIHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYGI 177 + + S+ VYG FSED + P S Y+ATKA+++ + + YG+ Sbjct: 114 ---HRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYGL 170 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 YGP+ P+ + PL +R ++ G + ++ +G+ RD+ +V D V + Sbjct: 171 HATGLRFFTVYGPWGRPD-MAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229 Query: 237 LKK---GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 L G + R GN+ ++ + I ++ + +PG R Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISV-------IEQAAGRPAQKVYKPMQPGDMVR 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 D+ + G+ +E GL V W Sbjct: 283 TMADTRRAHDAFGFDAVTPIEEGLPPVVQW 312 >gi|320193341|gb|EFW67979.1| GDP-mannose 4,6-dehydratase [Escherichia coli WV_060327] Length = 373 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKIARAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|242019803|ref|XP_002430348.1| GDP mannose-4,6-dehydratase, putative [Pediculus humanus corporis] gi|212515472|gb|EEB17610.1| GDP mannose-4,6-dehydratase, putative [Pediculus humanus corporis] Length = 364 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 46/281 (16%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D C+ + E QPD I N AA+SHV S ++ + +GT LL+ R +C Sbjct: 78 DMTDTSCLIKIISEIQPDEIYNLAAQSHVKVSFDLSEYTAEVDALGTLRLLDAIR---TC 134 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 + RF Q ST E+YG + + E P+ P SPY+ K ++V+ + Y + Sbjct: 135 RLE---KTVRFYQASTSELYGKVQEIPQKETTPFYPRSPYACAKLYGYWIVINYREAYKL 191 Query: 178 ----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGS-HVFLYGDGQNVRDWLYVEDHVRA 232 +L ++ S G +F + I ++ +++ G V G+ + RDW + +D+V A Sbjct: 192 FACNGILFNHESPRRGE-NFVTRKITRSVAKIVLGQLDVLELGNLDSKRDWGHAKDYVEA 250 Query: 233 LYLVLKKGR-------IGERYNIGGNNERK----NIDIVFE------------IGFLLDA 269 ++L+L++ + GE +++ E I I++E G + Sbjct: 251 MWLMLQQDKPSDYVIATGESHSVREFVEASFRYVGIKIIWEGKGVSEVGKDAATGIVRVK 310 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + PK + TE+ + D +K K+E+GW P+ Sbjct: 311 INPKYFRPTEVDFLLG-----------DPTKAKNELGWKPK 340 >gi|191169555|ref|ZP_03031281.1| GDP-mannose 4,6-dehydratase [Escherichia coli B7A] gi|190900406|gb|EDV60229.1| GDP-mannose 4,6-dehydratase [Escherichia coli B7A] Length = 373 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPQSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|314954105|gb|ADT64849.1| putative epemerase/dehydratase [Burkholderia contaminans] Length = 316 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV +L VL +D + G ++ + + F L+ D+ Sbjct: 7 RILVTGGAGFLGSHLCERLV-ELGHDVLCVDNY-FTGTKQNVATLLGNPSFEALRHDV-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 63 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVMGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG D E P P + Y K ++ L + Sbjct: 108 KRTHARVLQTSTSEVYGDPDVHPQPESYRGNVNPLGPRACYDEGKRCAETLFFDYHRQQN 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + + G + LYGDG R + YV+D V L Sbjct: 168 VRIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGEDITLYGDGSQTRAFCYVDDMVDGLI 227 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + N+G +E + L ++ + S + L+ +D P Sbjct: 228 RMMATPAELTGPINLGNPHE-------IAVSELAQIILRLTGSKSRLVFRPLPKDDP--- 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S ++ + W P +E+GL +T+ ++ Sbjct: 278 TQRCPDISLARTHLDWEPTIGLEAGLQRTIDYF 310 >gi|163858347|ref|YP_001632645.1| NDP-sugar epimerase [Bordetella petrii DSM 12804] gi|163262075|emb|CAP44377.1| NDP-sugar epimerase [Bordetella petrii] Length = 341 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 38/339 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA-GNLNSLKEISQS------NLFSFLQ 56 +VTG AGFIGS L L LK+ V+ +A G+ ++L E+ S F+F++ Sbjct: 20 LVTGCAGFIGSNLLETL---LKLDQTVVGLDNFATGHRHNLDEVRNSVEPAQWARFTFVE 76 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLW 114 DI D + A + D +++ AA V RS+ ++ ITTN IG F+ + Sbjct: 77 GDIRDLAACQRAAEGV--DHVLHQAALGSVPRSL---NDPITTNDVNIGGFLNM------ 125 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++D K + F+ ++ YG ED P SPY+ TK ++ + + Sbjct: 126 -LVAARDAKVK-TFVYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFARS 183 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ + N +G PE +IP MI G V + GDG+ RD+ +VE+ V Sbjct: 184 YGLASVGLRYFNVFGKRQDPEGAYAAVIPKWTAAMIRGDDVVINGDGETSRDFCFVENAV 243 Query: 231 RA--LYLVLKKGRIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED 286 +A L + + + + YN+ GG R ++ +++ FL L + + + + + Sbjct: 244 QANLLGALAPEEGVNQVYNVAYGG---RTTLNQLYK--FLAQTLGGEGVRYDKPPVYADF 298 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R G R D +K +G+ P ++ GL + WY+ Sbjct: 299 RAGDVRHSQADIAKGGKLLGYQPAYDILRGLQTAMPWYI 337 >gi|116119447|gb|ABJ80670.1| putative nucleotide sugar dehydratase [Campylobacter jejuni] gi|116119453|gb|ABJ80673.1| putative nucleotide sugar dehydratase [Campylobacter jejuni] Length = 155 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 9/161 (5%) Query: 89 SILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED 148 S ++ TN+ GT +LE + K + F+ ST EVYG+ E Sbjct: 1 SYTAPQSYVDTNVNGTLNMLEAAK---------KNEISHFIHTSTSEVYGTAFYVPIDEK 51 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 P P SPYSA+K ++D + L++ +++ + V ++ N YGP +IP IT+++ G Sbjct: 52 HPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSG 111 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 + GD RD +V D +L GE YNIG Sbjct: 112 AKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGEVYNIG 152 >gi|119492188|ref|ZP_01623598.1| GDP-D-mannose dehydratase [Lyngbya sp. PCC 8106] gi|119453245|gb|EAW34411.1| GDP-D-mannose dehydratase [Lyngbya sp. PCC 8106] Length = 342 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 27/321 (8%) Query: 2 RLIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSF 54 R ++TG G GS L L+ D ++ ++ + + N + + I ++ LF Sbjct: 6 RALITGITGQDGSYLSELLLAKDYEVHGII--RRSSCFNTDRIDHIYKDPHNEEARLFLH 63 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 D+ D +R L+E +P I N A+SHV S + + +GT +LE R + Sbjct: 64 YG-DLTDGTTLRRILEEVKPVEIYNLGAQSHVRVSFDSPEYTVDAVGMGTLRILEAIRDY 122 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 + RF Q + E++G + + E P+ P SPY+ K + + + + + Sbjct: 123 ----QHRTGIEVRFYQAGSSEMFGKVQEVPQKETTPFYPRSPYACAKVYAHWQTVNYRES 178 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 Y + N+ P F + I A+ R+ +G +Y G+ + RDW Y +D+V Sbjct: 179 YDLFACNGILFNHESPRRGETFVTRKITRALARIAKGMQKEVYLGNLDSKRDWGYAKDYV 238 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RP 288 RA++L+L++ + + NE +I ++ F L Y ++F E RP Sbjct: 239 RAMWLMLQQDAPDD--YVVATNETHSIREFLDVAFNYVNLDWHDY-----VKFDERYLRP 291 Query: 289 GHDRRYAIDSSKIKSEIGWFP 309 D SK K ++GW P Sbjct: 292 AEVELLIGDPSKAKQKMGWEP 312 >gi|90021762|ref|YP_527589.1| ubiquinone biosynthesis O-methyltransferase [Saccharophagus degradans 2-40] gi|89951362|gb|ABD81377.1| GDP-mannose 4,6-dehydratase [Saccharophagus degradans 2-40] Length = 374 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 33/292 (11%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + LKE QPD + N A+SHV S + + IG +LE R Sbjct: 65 DLTDSSNLTRILKEVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGALRILEAIRF---- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E++G + + +E P++P SPY+ K + ++ + + +YG+ Sbjct: 121 LGLEKKT--RFYQASTSELFGEVKEIPQNESTPFHPRSPYAVAKMYAYWITVNYRESYGM 178 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ P F + I I + +G LY G+ +RDW + +D+VR Sbjct: 179 FACNGILFNHESPRRGETFVTRKITRGIANVAQGVEKCLYLGNMDALRDWGHAKDYVRMQ 238 Query: 234 YLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGF-------------LLDALIPK 273 +++L++ G++ ++ + I+ FE+ F ++D Sbjct: 239 WMMLQQAEPEDFVIATGKQISVREFVKLSAINAGFELEFSGEHINEVATVVSIVDPNKAP 298 Query: 274 SYSHTELIRFIED---RPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVC 322 + + I ++ RP D +K K+++GW P+ ++E + V Sbjct: 299 ALKVGDQIVKVDPKYFRPAEVETLLGDPAKAKAKLGWVPEISVEEMCAEMVA 350 >gi|13476279|ref|NP_107849.1| putative sugar nucleotide epimerase/dehydratase [Mesorhizobium loti MAFF303099] gi|14027040|dbj|BAB53994.1| putative sugar nucleotide epimerase/dehydratase [Mesorhizobium loti MAFF303099] Length = 352 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 53/357 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGFIG AL L N +V+VID L + + + D+ + Sbjct: 6 VVTGGAGFIGCALSTKLANRFD-RVVVIDSLHPQIHAERKRPADLDPRVELVVADVTEAS 64 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 AL+ +P+ +V+ AAE+ +S+ A N++GT +L+ + Sbjct: 65 TWVPALETIRPEVVVHLAAETGTGQSLTEASRHAIANVLGTTRMLD-------AFATASH 117 Query: 124 DQFRFLQISTDEVYG-----SLDKGLFS--------------------EDMPY------- 151 RF+ S+ VYG S G + E +P Sbjct: 118 VPERFVLASSRAVYGEGAWRSRKAGEITYPGQRSKQQLERAEWDFPGLEPLPMDAEKTIP 177 Query: 152 NPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEK----LIPLAITRMIE 207 NP+S Y ATK + + ++ AW ++G V + N YGP ++ L I E Sbjct: 178 NPTSIYGATKLTQEQILRAWALSFGTAVNVLRLQNVYGPGQSLTNSYTGIVSLFIRMAKE 237 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFL 266 G + +Y DG RD+++++D AL Y++G ++ +D Sbjct: 238 GKSIPIYEDGDIGRDFVFIDDVASALDKATATDLSQSLAYDVGTGSKTTVLD-------- 289 Query: 267 LDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 L ++ K Y E R G R + + E+ W P ++++ G+ + W Sbjct: 290 LARIVAKRYEAPEPHVNGMFRNGDVRCAVANIDRTVRELEWRPLKSVDEGIGQLSEW 346 >gi|317478717|ref|ZP_07937871.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] gi|316905147|gb|EFV26947.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] Length = 361 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 12/201 (5%) Query: 43 LKEISQSNLFSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII 102 ++++ ++ L + D+ D + +++ QPD I N AA+SHV S + + + Sbjct: 54 VRDMKKNRLVNLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAV 113 Query: 103 GTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKA 162 GT +LE R+ L +KK + Q ST E++G + + E P+ P SPY K Sbjct: 114 GTLRMLEAVRI----LGLEKKT--KIYQASTSELFGLVQEVPQKETTPFYPRSPYGVAKQ 167 Query: 163 SSDYLVLAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDG 217 ++ + +YG+ +L ++ S G F + I LA R+ +G LY G+ Sbjct: 168 YGFWITKNYRESYGMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQGYQDKLYLGNL 226 Query: 218 QNVRDWLYVEDHVRALYLVLK 238 ++RDW Y +D+V ++L+L+ Sbjct: 227 NSLRDWGYAKDYVECMWLILQ 247 >gi|303326133|ref|ZP_07356576.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio sp. 3_1_syn3] gi|302864049|gb|EFL86980.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio sp. 3_1_syn3] Length = 339 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 55/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLV------IDKLTYAGNLNSLKEISQSNL-FS 53 M ++VTG AGFIG L R L+ D V + D L +L+ + ++ F Sbjct: 1 MHVLVTGAAGFIGYHLARRLLADGHTVVGIDNCNDYYDVQLKKDRLAALQALPEAPARFR 60 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 F +D+ D + + + +VN AA++ V S+ ++ +N+ G LLE R Sbjct: 61 FELLDLADGGGMAELFRRGRFSHVVNLAAQAGVRYSLQNPASYVNSNLAGFGNLLEGCR- 119 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDY 166 + + F S+ VYG + PY +P S Y+ATK S++ Sbjct: 120 ------HNGVEHLLF--ASSSSVYG------LNAARPYSVHHNVDHPVSLYAATKKSNEL 165 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 + A+ H Y +P YGP+ P+ + L T ++ G + ++ +G+ RD+ Y+ Sbjct: 166 MAHAYSHLYRLPCTGLRFFTVYGPWGRPDMALHLFTTAIVRGEAIKVFNEGRMRRDFTYI 225 Query: 227 ED----HVRALYLVLKKGRIGER--------------YNIGGNNERKNIDIVFEIGFLLD 268 +D VR L L+ + YNIG N + +++ I L + Sbjct: 226 DDIVEGVVRLLPLIPAPDPAFDAAAPDPASSSAPWRIYNIGNN---QTVELNEFIAVLEE 282 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 AL T + +PG D + + G+ P + G+ + V WY Sbjct: 283 AL-----GRTARKELLPMQPGDVEATWADIDALTAATGFAPVTPLREGIARFVDWY 333 >gi|224367918|ref|YP_002602081.1| NAD-dependent epimerase/dehydratase family protein [Desulfobacterium autotrophicum HRM2] gi|223690634|gb|ACN13917.1| NAD-dependent epimerase/dehydratase family protein [Desulfobacterium autotrophicum HRM2] Length = 322 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 41/334 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGFIGS LC L+ ++ +V+ +D GN+N++ + ++ F ++ D+ Sbjct: 4 KILVTGGAGFIGSHLCMKLL-EMNNEVICMDNFI-TGNINNINVLLKNPHFEIIRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T + G +LE Sbjct: 60 -----TIPLDLDIDEIYNLACPASPVSYQEDPVQTIKTCVTGAINMLELAN--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K + + LQ ST EVYG + E+ P S Y K ++ L + Sbjct: 106 -KLKIKILQASTSEVYGDPEIHPQVEEYWGRVNPIGIRSCYDEGKRCAETLFFDYHRQNN 164 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP+ P+ +++ I + ++ ++ ++GDG + R + YVED V L Sbjct: 165 LKIKVARIFNTYGPFMQPDDGRVVSNFIIQALKKDNLTIFGDGNHTRSFCYVEDLVEGLT 224 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE---DRPGH 290 L+ N+G NNE I+ L LI K T I F D P Sbjct: 225 SLMNSPNDFTGPVNLGNNNETTIIE--------LAELIIKLSGSTSGIVFKVLPLDDPQI 276 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + + KI +GW Q ++E GL KT+ ++ Sbjct: 277 RCPNIVKAEKI---LGWKAQISLEEGLLKTIDYF 307 >gi|224109544|ref|XP_002315231.1| predicted protein [Populus trichocarpa] gi|118483816|gb|ABK93800.1| unknown [Populus trichocarpa] gi|118485318|gb|ABK94518.1| unknown [Populus trichocarpa] gi|222864271|gb|EEF01402.1| predicted protein [Populus trichocarpa] Length = 346 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 142/326 (43%), Gaps = 38/326 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+++TGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILITGGAGFIGSHLVDRLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + + D I + A + + I TN+IGT + L Sbjct: 92 EPLLV-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGH 173 K+ R L ST EVYG D + ++ Y NP S Y K ++ L+ + Sbjct: 135 AKRVGARILLTSTSEVYG--DPLIHPQNESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR 192 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 +GI + ++ N YGP + +++ I + I + + G R + YV D V Sbjct: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQTRSFCYVSDMVD 252 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L +++ G NIG E I++ + L++ + I +E+ P Sbjct: 253 GLIRLMEGENTGP-INIGNPGEFTMIELAENVKELINPEV--------KIISVENTPDDP 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGL 317 R+ D +K K +GW P+ + GL Sbjct: 304 RQRKPDITKAKELLGWEPKIKLRDGL 329 >gi|116119449|gb|ABJ80671.1| putative nucleotide sugar dehydratase [Campylobacter jejuni] Length = 155 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 9/161 (5%) Query: 89 SILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED 148 S ++ TN+ GT +LE + K + F+ ST EVYG+ E Sbjct: 1 SYTAPQSYVDTNVNGTLNMLEAAK---------KNEISHFIHTSTSEVYGTAFYVPIDEK 51 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 P P SPYSA+K ++D + L++ +++ + V ++ N YGP +IP IT+++ G Sbjct: 52 HPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPKQSARAIIPTIITQILSG 111 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 + GD RD +V D +L GE YNIG Sbjct: 112 AKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGEVYNIG 152 >gi|225010351|ref|ZP_03700823.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-3C] gi|225005830|gb|EEG43780.1| NAD-dependent epimerase/dehydratase [Flavobacteria bacterium MS024-3C] Length = 330 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 35/331 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TG AGF+GS LC + + V+ +D L G+L ++ + F F D+ Sbjct: 10 RILITGAAGFLGSHLCDFFIEK-DFHVIGMDNLI-TGDLKNISHLFSLPHFEFHHHDVTT 67 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + AL D I++FA+ + + E + +GT LL L+++ Sbjct: 68 FVHVPGAL-----DYILHFASPASPIDYLKIPIETLKVGALGTHNLL--------GLAKE 114 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K R L ST EVYG +ED P P Y K + + +A+ +G Sbjct: 115 KGA--RILVASTSEVYGDPLVHPQTEDYNGNVSPVGPRGVYDEAKRFMESITMAYHRFHG 172 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N YGP +++P + +++ G + ++GDG R + Y+ D V +Y Sbjct: 173 LETRIVRIFNTYGPRMRLNDGRVVPAFMGQVLRGEDLTVFGDGSQTRSFCYISDQVAGIY 232 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR-R 293 +L E NIG NE ++ EI + S T+ + P D + Sbjct: 233 SLLMSD-YAEPVNIGNPNETTILEFAQEI---------QRLSGTDQKIVFKPLPQDDPLQ 282 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S K + W P+ + E G+ K ++ Sbjct: 283 RKPDISLAKKVLDWTPKVSREEGIAKVFDYF 313 >gi|206890431|ref|YP_002248318.1| putative CDP tyvulose epimerase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742369|gb|ACI21426.1| putative CDP tyvulose epimerase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 356 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 67/374 (17%) Query: 3 LIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++TGGAGF+GS L ++ I+V+ +D L G+ +L + + + F+ DI + Sbjct: 6 ILITGGAGFVGSNLAIKFKERYSDIKVIALDNLRRRGSELNLVRLKRYGV-EFIHGDIRN 64 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEF-ITTNIIGTFILLEETRLWWSCLSQ 120 RE + S + F D ++ +AE V + E+ I TN+IGT +CL Sbjct: 65 REDLES-IGYF--DLMIECSAEPSVLSGYNESPEYLINTNLIGTI----------NCLEM 111 Query: 121 DKKDQFRFLQISTDEVY--------------------------GSLDKGLFSEDMPYNP- 153 +K++ + +ST VY G KG+ +E+ P N Sbjct: 112 LRKNKADIIFLSTSRVYPIKTLNSLEYEELETRFELKLYQSIKGVSQKGI-TEEFPLNGI 170 Query: 154 SSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHF---PEKLIPLAITRMIEGS- 209 S Y TK +S+ L+ + YGI +++ C GP+ + + L + + I G Sbjct: 171 RSLYGTTKLASELLIQEYIGVYGIRGVINRCGVLTGPWQMGKVEQGFVVLWVAKHIYGGE 230 Query: 210 --HVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI------GERYNIGGNNERKNIDIVF 261 ++ G G+ VRD L+++D LY +++K + G+ +NIGG +NI + Sbjct: 231 LCYIGYKGTGKQVRDILHIDD----LYNLIEKQILNIHTYNGQIFNIGGG---RNISVSL 283 Query: 262 EIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI-DSSKIKSEIGWFPQENMESGLNKT 320 + L + + I+ I D D Y I D +K ++EIGW P+ ++ + + Sbjct: 284 K---ELTQICQDVTGNKIEIKSIPDTRFADIPYYITDYTKAQTEIGWIPKYSVREIIEEI 340 Query: 321 VCWYLDNNWWWRPL 334 W DN P+ Sbjct: 341 ARWIYDNKELLSPI 354 >gi|46241634|gb|AAS83019.1| GDP-mannose dehydratase [Azospirillum brasilense] Length = 353 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 10/186 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + ++E QPD I N AA+SHV S + ++ +GT LLE R+ Sbjct: 64 DLTDATNLIRIVQEVQPDEIYNLAAQSHVQVSFETPEYTANSDGLGTLRLLEAIRI---- 119 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 L +KK RF Q ST E+YG + + E P+ P SPY+A K + ++ + + YGI Sbjct: 120 LGLEKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGI 177 Query: 178 PVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 N+ GP F + I A+ + G LY G+ RDW + D+V + Sbjct: 178 HASNGILFNHEGPTRGETFVTRKITRAVAAIQLGLQKTLYLGNLDAKRDWGHARDYVEGM 237 Query: 234 YLVLKK 239 + +L++ Sbjct: 238 WRILQQ 243 >gi|332092430|gb|EGI97503.1| GDP-mannose 4,6-dehydratase [Shigella boydii 5216-82] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|297205241|ref|ZP_06922637.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] gi|297149819|gb|EFH30116.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] Length = 336 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 47/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS L+ D V+V+D L Y G+ ++ + ++ F D+ Sbjct: 8 MRVLVTGGAGYIGSHTVNALLEDGN-DVVVLDNL-YTGHRQAVNKKAK-----FYHGDVL 60 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L + DA+++FAA V S+ ++ N+ G LL+ Sbjct: 61 DTNLVTNILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAM--------- 111 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K + L S+ + K L E P NP +PY TK + ++ GI Sbjct: 112 -KTAGVKNLVFSSSAATYGVPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDQADGIKS 170 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ + G H PE L+P + G+ F ++G DG NVRD+ Sbjct: 171 IALRYFNVAGASLDASIGEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDY 230 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D HV AL+ V+K + + +N+G N N++I+ + IP + Sbjct: 231 VHVVDLAQAHVLALHYVVKNQK-SDIFNLGSANGFSNLEILQSAIKVTGEDIPYTIG--- 286 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G DS+K ++ + W PQ + Sbjct: 287 -----PRRGGDPDSLVADSTKARTVLNWQPQHD 314 >gi|225875013|ref|YP_002756472.1| UDP-glucose 4-epimerase [Acidobacterium capsulatum ATCC 51196] gi|225794409|gb|ACO34499.1| UDP-glucose 4-epimerase [Acidobacterium capsulatum ATCC 51196] Length = 324 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 56/335 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IG + LV+ V+V+D NL K +F++ D+ Sbjct: 1 MRILVTGGAGYIGGTVAGLLVSQGH-DVVVLD------NLGHSKRSMIPAGTTFVEADLA 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + S L++ +A+++FAA S+ + + N T L E + Sbjct: 54 DRATVESTLRD-GIEAVLHFAALIEAGESMQVPERYFRNNTASTLTLFE-------AMLA 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIPV 179 ++ F ST VYG + ED P++ Y +K + + LAW H +G+ Sbjct: 106 AGVNKLVF--SSTAAVYGEPESTPIREDAKLQPTNAYGESKLLVEQM-LAWLHRCHGLRY 162 Query: 180 L------LSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLY 225 ++ G H PE LIPL + I + + +YG DG +RD+++ Sbjct: 163 ASLRYFNVAGAMPGRGEAHEPESHLIPLILDAAIGRRAAIKVYGSDYPTPDGTCIRDYIH 222 Query: 226 VEDHVRALYLVL-------KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 V D +A L L + GR+ YN+G GF + +I + T Sbjct: 223 VRDLAKAHLLALDALNDESRPGRL--IYNLGNGQ-----------GFSVREVIETARRVT 269 Query: 279 -ELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 I IE+ RPG S KI+ ++GW P+ Sbjct: 270 GREIPVIEETRRPGDPAVLVASSEKIRQDLGWTPE 304 >gi|212703423|ref|ZP_03311551.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] gi|212673168|gb|EEB33651.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] Length = 244 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 32/248 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L + +V+V+D NL + + + +F+Q DI Sbjct: 1 MAILVCGGAGYIGSHAVHALAAAGQ-EVVVVD------NLQTGHAAAVAGKAAFVQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D C+ + F+ D +++FAA+S V S++ ++ N+ G LLE + Sbjct: 54 DAACLDDIFRRFRIDGVMHFAADSQVGESMVNPLKYFNNNVGGMQSLLE---------AM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 + R + S+ VYG D SED P P++PY +K + ++ +GI Sbjct: 105 VRHGVGRIVFSSSAAVYGEPDSVPISEDAPTRPTNPYGHSKLMMEAMMRWVSAAHGIRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPEK-LIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 V + + G H PE LIPL + + + H+ ++G DG +RD++ Sbjct: 165 SLRYFNVAGALADGSIGEDHSPESHLIPLVLQVPLGQRPHITIFGDDYATPDGTCIRDYI 224 Query: 225 YVEDHVRA 232 V D V A Sbjct: 225 AVTDLVDA 232 >gi|325263694|ref|ZP_08130427.1| UDP-glucose 4-epimerase [Clostridium sp. D5] gi|324030732|gb|EGB92014.1| UDP-glucose 4-epimerase [Clostridium sp. D5] Length = 334 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 49/332 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ D V++ D L G++ ++ ++ F Q DI Sbjct: 1 MSVLVLGGAGYIGSHTVYELI-DRGEDVVIADNLE-TGHIEAVHPRAR-----FYQGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 +R I S ++ DA+++FAA S V S+ ++ N+ GT +LLE S ++ Sbjct: 54 NRAFIDSVFEKESIDAVIHFAANSLVGESMSDPLKYYDNNVCGTKVLLE------SMIAH 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D K + + ST YG + ED P++ Y TK + + +++ +G+ + Sbjct: 108 DVK---KIVFSSTAATYGEPENIPILEDDKTCPTNTYGETKLAMEKMMMWTDRAHGLKFV 164 Query: 181 L--------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 ++ S G H PE LIPL + + + ++ ++G DG +RD++ Sbjct: 165 ALRYFNACGAHKSGCIGEAHSPETHLIPLILQVPLGQREYISIFGDDYDTKDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL- 280 +V D +A L +K G +N+G +GF + +I + T L Sbjct: 225 HVTDLAQAHILAVKYLMDGGESNTFNLGNG-----------VGFTVKEVIETARRATGLE 273 Query: 281 --IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + R G R S K K+ +GW P+ Sbjct: 274 IKAQTAPRRAGDPARLIASSEKAKAVLGWNPE 305 >gi|55376593|ref|YP_134444.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55229318|gb|AAV44738.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 309 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 29/254 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GFIGS L L D ++VL D + N +++ ++ D+ D Sbjct: 10 RVLVTGGGGFIGSHLASALAVDNHVRVL--DDFSTGRRANLPDDVT------VIEGDVRD 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSI---LGADEFITTNIIGTFILLEETRLWWSCL 118 RE + +A++ D + + AA V SI + E T + F C Sbjct: 62 RETLDAAIEGV--DVVFHEAAMVSVPESIEQPVDCHELNGTATVNVF----------DCA 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 ++ R + S+ VYG D ED P P+SPY K + + YG+P Sbjct: 110 ---RRQDTRVVFASSAAVYGVPDDVPIGEDAPTEPNSPYGFEKYLGEQYARFYTEEYGLP 166 Query: 179 VLLSNCSNNYGPYHFPEK---LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + N YGP + +I + + G + + GDG RD+++V+D VRA L Sbjct: 167 TVPLRYFNVYGPRGLDGEYAGVIGTFVRQAQAGEPLTVEGDGTQTRDFVHVDDVVRANLL 226 Query: 236 VLKKGRIGERYNIG 249 IG +N+G Sbjct: 227 AATTDAIGRPFNVG 240 >gi|15895449|ref|NP_348798.1| GDP-D-mannose dehydratase [Clostridium acetobutylicum ATCC 824] gi|15025175|gb|AAK80138.1|AE007718_4 GDP-D-mannose dehydratase [Clostridium acetobutylicum ATCC 824] gi|325509595|gb|ADZ21231.1| GDP-D-mannose dehydratase [Clostridium acetobutylicum EA 2018] Length = 355 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 116/252 (46%), Gaps = 27/252 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS------LKEISQSNLFSFL 55 + I+TG G GS L +L LK V + A + N+ ++ N FL Sbjct: 3 KAIITGITGQDGSYLTEFL---LKKGYEVHGIIRRASSFNTKRIDYLFEDPKIGNKLLFL 59 Query: 56 Q-VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR-L 113 D+ D I L++ QP I N AA+SHV S + + T+ +GT L+ + L Sbjct: 60 HHGDLTDSSNINRLLEKVQPTEIYNLAAQSHVQVSFEVPEYTVETDAVGTLRFLDAIKEL 119 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSL-DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 C +F Q ST E++G + SE P+ P SPY+A K + ++ + + Sbjct: 120 GIKC---------KFYQASTSELFGGMPGTAPQSEKTPFYPRSPYAAAKLYAYWITVNYR 170 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVE 227 YGI VL ++ S G F + I AI +IEG+ G+ RDW Y Sbjct: 171 EAYGIFACNGVLFNHESPRRGE-TFVTRKITRAIANIIEGNQDKVSLGNLNAKRDWGYAG 229 Query: 228 DHVRALYLVLKK 239 D+V A++L+L+K Sbjct: 230 DYVEAMWLMLQK 241 >gi|300936643|ref|ZP_07151547.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 21-1] gi|300458224|gb|EFK21717.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 21-1] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|293415342|ref|ZP_06657985.1| GDP-mannose 4,6-dehydratase [Escherichia coli B185] gi|291432990|gb|EFF05969.1| GDP-mannose 4,6-dehydratase [Escherichia coli B185] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|251799714|ref|YP_003014445.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] gi|247547340|gb|ACT04359.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] Length = 341 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/363 (23%), Positives = 161/363 (44%), Gaps = 47/363 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N +++V+D + + L+ + EI+ ++ F D Sbjct: 1 MVILVTGGAGYIGSHTCLELIN-AGYELIVLDNFSNSNIVPLHRIYEITGKHI-KFYHAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + ++ I E + DA+++ A V +S+ + N+ GT L C Sbjct: 59 LLNKNSIEKIFMENKIDAVIHLAGYKSVGQSVQSPLSYYHNNVTGTLFL---------CQ 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYL---VLAWGHTY 175 + K + + + S+ VY S+++G SED S+PY TK + + + + + Sbjct: 110 TMQKFNVTKMVFSSSATVY-SINEGAISEDAQLGSSNPYGRTKLMIEEILKDLYVSDNNW 168 Query: 176 GIPVLL------SNCSNNYGPYH--FPEKLIPLAITRMIEG--SHVFLYG------DGQN 219 I +L ++ S G P L+P IT++ G + ++G DG Sbjct: 169 SISILRYFNPVGAHSSGRLGEESNGIPNNLMPY-ITQVAIGKLEQLQIFGGDYPTPDGTG 227 Query: 220 VRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 +RD+++V D H+RA+ V+ + + YN+G N ++++ + IP + Sbjct: 228 IRDYIHVMDLAAGHIRAIERVMTSTGV-KAYNLGTGNGYSVMEMIIMFSQVSGRKIPYT- 285 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPLY 335 ++ RPG D S K E+ W + +E W L N ++ + Sbjct: 286 -------IVDRRPGDVAVCYADPSMAKRELFWEAERGIEEMCEDAWRWQLINPSGYKEIV 338 Query: 336 KEL 338 +++ Sbjct: 339 RKI 341 >gi|238063742|ref|ZP_04608451.1| GDP-D-mannose dehydratase [Micromonospora sp. ATCC 39149] gi|237885553|gb|EEP74381.1| GDP-D-mannose dehydratase [Micromonospora sp. ATCC 39149] Length = 314 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 32/330 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVN-DLKIQVLVIDKLTYAGNLNSLKEISQSNLF-SFLQVD 58 MR++VTGGAGFIG+ L R L+ D +++V+D L+ G L++L ++ L S + D Sbjct: 1 MRVVVTGGAGFIGANLVRELLRVDGISEIVVVDDLS-TGALDNLADLPVRLLVGSVMDPD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D +A ++V+ A V RSI N GT +LE R Sbjct: 60 LLDEAVPGAA-------SVVHLGALGSVPRSIADPLRSHHANATGTLTVLEAAR------ 106 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + S+ VYG+ E + P SPY+ +K +++ A+ YG+P Sbjct: 107 ---RHGVGQTILASSSSVYGANPVLPRRETLRPMPMSPYAVSKLATEAYANAYAACYGLP 163 Query: 179 VLLSNCSNNYGPY----HFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 VL N +GP H ++P ++ ++G + ++GDG RD+ YV L Sbjct: 164 VLPFRFFNVFGPRQAADHAYAAVVPRFVSAALDGRPLEIFGDGLQTRDFTYVGSVTAVLV 223 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 +L++ + N+ +D+V E+ +L + + + R G R Sbjct: 224 DAILRRVHTPDTVNLAFGARVSLLDLVAELEAVLGRRLERVHR--------PPRVGDVRD 275 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 DS+++ + +GL TV W Sbjct: 276 SQADSARLCELFPAVRPHPLRAGLEATVGW 305 >gi|238062683|ref|ZP_04607392.1| Ata12 protein [Micromonospora sp. ATCC 39149] gi|237884494|gb|EEP73322.1| Ata12 protein [Micromonospora sp. ATCC 39149] Length = 346 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 30/327 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R ++TG G G+ L +L+ +V + + A ++ SL++ + + D+ D Sbjct: 4 RALITGITGQDGTYLAEHLLQS-GYEVFGLVRGQTAPSVRSLRQPDPA--VKLISGDLLD 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + +A++ PD + N A S+V S + +G +LE R+ LS Sbjct: 61 QTSLVAAIERAAPDEVYNLGALSYVPVSWRQSTTTAEVTGMGVLRMLEALRIV-GGLSDS 119 Query: 122 KK---DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + Q RF Q S+ E++G + + + +E P++P SPY A KA Y+V + +YG+ Sbjct: 120 RSPAAGQPRFYQASSSEMFGKVREPVQNELTPFHPRSPYGAAKAFGHYMVQNYRESYGMY 179 Query: 179 VLLSNCSNNYGPYHFPE---KLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALY 234 + N+ P PE + + L + + G L G+ RDW + D+VR + Sbjct: 180 AVSGILFNHESPVRGPEFVTRKVSLGVAAVKLGIRSSLRLGNLSAERDWGFAGDYVRGMV 239 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL---IRFIED----R 287 L+L + +E ++ + + + L+ +++H L + D R Sbjct: 240 LMLAQ------------DEPEDYVLGTGVTHSVRELVEAAFAHVGLNWRDHVVVDESLIR 287 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENME 314 P D +K + +GW P + E Sbjct: 288 PAEVELLCADPTKARQRLGWKPSVSFE 314 >gi|227536752|ref|ZP_03966801.1| GDP-mannose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] gi|227243405|gb|EEI93420.1| GDP-mannose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] Length = 361 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 58/305 (19%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I ++E QPD I N A SHV S + + +GT +LE R+ Sbjct: 65 DLTDSTNIIRVIQEVQPDEIYNLGAMSHVKVSFDSPEYVANVDGLGTLRILEAVRI---- 120 Query: 118 LSQDKKDQFRFLQISTDEVYGSL-----DKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 L +KK R Q ST E+YG L DKG + E + P SPY K ++ + Sbjct: 121 LGLEKKT--RIYQASTSELYGGLAENKNDKGFYDEKSAFYPRSPYGVAKIYGFWITKNYR 178 Query: 173 ---HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVED 228 H Y +L N + F + I +A+ + G LY G+ RDW + +D Sbjct: 179 EAYHLYACNGILFNHESPRRGETFVTRKITMAVAAIALGKQGCLYLGNLNAQRDWGHAKD 238 Query: 229 HVRALYLVLKK------------------------GRIGERYNIGGNNERK--------N 256 +V A++ +L++ +G G+ E + N Sbjct: 239 YVEAMWRILQQEKADDYVIAMGITTSVREFVRMAFAEVGIELLFEGDEENEIARVKSCNN 298 Query: 257 IDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESG 316 D + EIG ++ + P+ Y TE+ I D SK K+++GW P+ ++ S Sbjct: 299 PDYLLEIGKVVVKVDPQYYRPTEVDLLIG-----------DPSKSKTQLGWRPKYDLPSL 347 Query: 317 LNKTV 321 + + V Sbjct: 348 VQEMV 352 >gi|56477621|ref|YP_159210.1| UDP-glucose 4-epimerase [Aromatoleum aromaticum EbN1] gi|56313664|emb|CAI08309.1| UDP-glucose 4-epimerase, gene: SP1607 [Aromatoleum aromaticum EbN1] Length = 339 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/358 (24%), Positives = 160/358 (44%), Gaps = 61/358 (17%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVDIC 60 ++VTGGAG+IGS C L+ V+V+D L + + L +++I+ L F ++D+ Sbjct: 4 VLVTGGAGYIGSHTCVELLQSGH-DVVVVDNLCNSKSEALARVEQIAGRRLAGFHEIDVR 62 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + +++ ++ DA+++FAA V S+ E+ NI GT L TR + Sbjct: 63 ESDGLKAVFGAYRVDAVIHFAALKAVGESVREPLEYYDNNIGGTIAL---TR------AM 113 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK----------ASSD----Y 166 + +R + S+ VYG +E P P++PY TK A+SD Sbjct: 114 AEAGVYRLVFSSSATVYGDPRSMPIAESAPAAPTNPYGRTKWMTEQVLSDVAASDPRWQV 173 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP----LAITRMIEGSHVFLYG----- 215 ++L + + G ++ S G P+ P L+P +A+ R+ + ++G Sbjct: 174 VLLRYFNPVG-----AHRSGRIGEDPHGIPNNLMPYISQVAVGRL---PQLQVFGGDYAT 225 Query: 216 -DGQNVRDWLYVED----HVRALYLVLKKGRIGER-YNIGGNNERKNIDIVFEIGFLLDA 269 DG VRD+++V D HV+A+ + +G G N+G ++++ Sbjct: 226 PDGTGVRDYIHVVDLARGHVQAVERI--EGLPGVTCLNLGTGRGYSVLEVIRSFEAASGR 283 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 +P R ++ RPG D+ + + +GW P+ ++++ W N Sbjct: 284 RVP--------YRIVDRRPGDIAACWADAGRAEKVLGWKPEHDLDAMCRDAWRWQTGN 333 >gi|306829885|ref|ZP_07463072.1| UDP-glucose 4-epimerase [Streptococcus mitis ATCC 6249] gi|304427896|gb|EFM30989.1| UDP-glucose 4-epimerase [Streptococcus mitis ATCC 6249] Length = 339 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 58/358 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 +++VTGGAGFIG+ L+ QV+V+D L + N SL+ + + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELIQAGH-QVVVVDNLVNS-NRKSLEVVEKITGVEIPFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R LK+ +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDILKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDYL 167 ++ + + S+ VYG ED P + ++PY T KA S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQ 218 V+ Y P+ ++ S + G P P L+P +A + + V ++G DG Sbjct: 173 VVLL--RYFNPI-GAHESGDLGENPNGIPNNLLPYVAQVAVGKLEQVQVFGDDYETEDGT 229 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV AL + +KG YN+G ++I+ + + IP Sbjct: 230 GVRDYIHVVDLAKGHVAALQKI-QKGSGLNIYNLGTGKGYSVLEIIQNMEKAVGRPIP-- 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +E RPG D +K K+E+GW E+ L ++ ++ W W+ Sbjct: 287 ------YRIVERRPGDIAACYSDPAKAKAELGW------EAEL--SITQMCEDAWRWQ 330 >gi|254295548|ref|YP_003061570.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814] gi|254044079|gb|ACT60873.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814] Length = 317 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++V+GGAGF+GS L L+ + +V+ +D L + G+ +++ + + F F++ D+C Sbjct: 7 RVLVSGGAGFLGSHLIDRLL-ERGDEVICLDNL-FTGDKRNIEHLFGNPRFEFIRHDVC- 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I N A + + T++ G + L Sbjct: 64 ------FPIYLEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + Q ST EVYG + E+ P S Y K ++ L + +G Sbjct: 108 KRIGAKIFQASTSEVYGDPNVHPQKEEYWGNVNPIGIRSCYDEGKRCAETLFFDYHRQHG 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP PE +++ I + ++G + LYGDG R + Y +D V A Sbjct: 168 LEIKVARIFNTYGPRMNPEDGRVVSNFIMQALKGEDITLYGDGLQTRSFCYRDDLVEAFL 227 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + + NIG E F I L + ++ + S ++LI +D P Sbjct: 228 RIMDTPKEVSGPINIGNPGE-------FTIKQLAELVVKLTNSSSKLIYLPLPQDDP--- 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D SK KS + W P+ +E GL T+ ++ Sbjct: 278 MQRQPDISKAKSLLDWEPKVKLEDGLISTISYF 310 >gi|186477741|ref|YP_001859211.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] gi|184194200|gb|ACC72165.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] Length = 313 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/343 (24%), Positives = 141/343 (41%), Gaps = 62/343 (18%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI--- 59 +++TGGAGF+GS LC LV V+ +D + G+ ++ + F ++ D+ Sbjct: 6 VLITGGAGFLGSHLCDRLVA-AGHDVMCVDNF-HTGSKQTIHHLIGKVNFEVIRHDVWLP 63 Query: 60 ----CDR----ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 DR C S + +Q D + S V ++LGA N++G Sbjct: 64 LYVEADRVFNMACPASPV-HYQSDPV------STVKTAVLGA-----INMLGLA------ 105 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDY 166 K+ R LQ ST EVYG + E P P + Y K ++ Sbjct: 106 ----------KRCGARILQASTSEVYGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAET 155 Query: 167 LVLAWGHTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWL 224 L + +G+ + ++ N YGP P+ +++ I + + G + LYGDG R + Sbjct: 156 LFFDYHRQHGVDIRIARIFNTYGPRMRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFC 215 Query: 225 YVEDHVRALYLVLKKGRIGERYNIGGNNE---RKNIDIVFEIGFLLDALIPKSYSHTELI 281 YV+D V L ++ +NIG E R+ ++V + S S + Sbjct: 216 YVDDLVEGLMRLMNHEGEPGPFNIGNPGEITIRELAEMVLR--------LTGSRSRIQYR 267 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D P R D +K + + W P +E GL +T+ ++ Sbjct: 268 PLPPDDPVQRRP---DIAKAREHLDWQPGVALEDGLKETIAYF 307 >gi|148261339|ref|YP_001235466.1| NAD-dependent epimerase/dehydratase [Acidiphilium cryptum JF-5] gi|146403020|gb|ABQ31547.1| NAD-dependent epimerase/dehydratase [Acidiphilium cryptum JF-5] Length = 318 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/332 (25%), Positives = 141/332 (42%), Gaps = 34/332 (10%) Query: 5 VTGGAGFIGSALCRYLVNDLKIQVLVID-------KLTYAGNLNSLKEISQSNLFSFLQV 57 +TG AGFIG + L++ + V D +L +A L ++ + F F +V Sbjct: 1 MTGAAGFIGYHVAEALLSRGALVAGVDDLNPYYDVRLKHA----RLDRLAAHDGFRFHRV 56 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 DI D +R+ ++ D IV+ AA++ V SI + N++G +LE R Sbjct: 57 DIADHAALRAVGDDW--DVIVHLAAQAGVRYSIDNPFAYAAANLVGHLSVLEVAR----H 110 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 + + K + S+ VYG+ ++E + P S Y+ATK + + + A+ H YG Sbjct: 111 VPRLKH----LVYASSSSVYGAGTPLPYAETARADRPQSLYAATKRADELMSAAYAHLYG 166 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 I YGP+ P+ ++ G + LY G RD+ Y++D V + V Sbjct: 167 IRQTGLRFFTVYGPWGRPDMAYFGFAEAIMAGRPITLYEAGTLKRDFTYIDDIVEGVMGV 226 Query: 237 LKK--GRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDR 292 ++ +G +NIG + D+V L+ + +I P Sbjct: 227 IEHAPAEVGAHRIFNIGNHRAEFVRDLV--------QLLEEELGRKAVIVDASRPPADPV 278 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D S + G+ P+ N+ G+ K V WY Sbjct: 279 ETCADLSALAELTGFAPKTNLNHGIKKFVSWY 310 >gi|115361222|ref|YP_778359.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] gi|115286550|gb|ABI92025.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] Length = 342 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV +L VL +D + G ++ + + F L+ D+ Sbjct: 33 RILVTGGAGFLGSHLCERLV-ELGHDVLCVDNY-FTGTKQNVAALLGNPSFEALRHDV-- 88 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 89 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVMGAI----------NMLGLA 133 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG D E P P + Y K ++ L + Sbjct: 134 KRTHARVLQTSTSEVYGDPDVHPQPESYRGNVNPLGPRACYDEGKRCAETLFFDYHRQQN 193 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + + G ++ LYGDG R + YV+D V L Sbjct: 194 VRIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGENITLYGDGSQTRAFCYVDDMVDGLI 253 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + N+G +E I L ++ + S + L+ +D P Sbjct: 254 RMMASPADLTGPINLGNPHE-------IAISELAQIILRLTGSKSRLVFRPLPKDDP--- 303 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ + W P +E+GL +T+ ++ Sbjct: 304 TQRCPDIGLARAHLDWAPTVGLEAGLRRTIDYF 336 >gi|323972797|gb|EGB67996.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA007] Length = 696 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ + +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 72/348 (20%), Positives = 136/348 (39%), Gaps = 49/348 (14%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ + G G +GSA+ R L ++++ L LN L + + F+ +D Sbjct: 380 RIFIAGHRGMVGSAIRRQLEQRGDVELV----LRTRDELNLLDSRAVHDFFASESID--- 432 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + +A K + A + + + I +NII + Sbjct: 433 -QVYLAAAK------VGGIVANNTYPADFIYQNMMIESNIIH---------------AAH 470 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-------PYNPSSPYSATKASSDYLVLAWGHT 174 + D + L + + +Y L K +E P N PY+ K + L ++ Sbjct: 471 QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTN--EPYAIAKIAGIKLCESYNRQ 528 Query: 175 YGIPVLLSNCSNNYGPYH--FPE--KLIPLAITRMIEGSH-----VFLYGDGQNVRDWLY 225 YG +N YGP+ P +IP + R E + V ++G G +R++L+ Sbjct: 529 YGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLH 588 Query: 226 VEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFL-LDALIPKSYSHTELIRFI 284 V+D A V++ + N N+ + L I K + + F Sbjct: 589 VDDMAAASIHVMELAHEVWQENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD 648 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 +P R +D +++ ++GW+ + ++E+GL T W+L+N +R Sbjct: 649 ASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDRFR 695 >gi|209515363|ref|ZP_03264229.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] gi|209504083|gb|EEA04073.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] Length = 329 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/330 (24%), Positives = 144/330 (43%), Gaps = 34/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTG +G++G+ + + L+ V+ D G S +++ F+ + D+C+ Sbjct: 3 KILVTGASGWLGTEIVKALLARGD-AVVGTDIAISPGTAAS---VARQPKFTAVAADLCE 58 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII---GTFILLEETRLWWSCL 118 + +++ +PDA+++ AA V I AD I N + G+ L E RL Sbjct: 59 WPQVLRLMEQHRPDAVIHAAAIVGV---IQCADIPIKANRVNVEGSLNLFEAMRL----- 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + +ST+E YG + L E+ NP+S Y ATK + ++ + +G+ Sbjct: 111 ----TGVKRVVHVSTEETYGDFNAPLIDEEHAQNPTSVYGATKLAVEHYGRIYTREHGLE 166 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQN-VRDWLYVEDHVRALYLVL 237 L YGP H P +P V DG + D +YV+D V L LVL Sbjct: 167 CLNVRTCWVYGP-HLPRLRVPRTYVEAALRGEVLHDPDGADFAVDQVYVDDTVAGLLLVL 225 Query: 238 KKG-RIGERYNIGGNNERKNIDIVFEI-----GFLLDALIPKSYSHTELIRFIEDRPGHD 291 K + YNI DI + G + Y H + + + G Sbjct: 226 DKPVHRYDSYNIATGTAPTIADIAAAVNRAIPGARISVGSRGPYRHGG--KVLSAKKG-- 281 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 A+D S+ ++E+G+ P+ +++ G+ T+ Sbjct: 282 ---ALDISRARAELGYEPRYDLQRGIEATI 308 >gi|194398413|ref|YP_002038236.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae G54] gi|194358080|gb|ACF56528.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae G54] Length = 339 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 58/358 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 +++VTGGAGFIG+ L+ QV+V+D L + N SL+ + + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELIQ-AGHQVVVVDNLVNS-NRKSLEVVERITGVEIPFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K+ +P I++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKQEEPTGIIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDYL 167 ++ + + S+ VYG ED P + ++PY TK A S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYGD------G 217 V+ Y P+ ++ S + G P P L+P +T++ G V ++GD G Sbjct: 173 VVLL--RYFNPIG-AHESGDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDG 228 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D + LKK + G YN+G ++I+ + + IP Sbjct: 229 TGVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGRPIP-- 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +E RPG D +K K+E+GW E+ L+ + ++ W W+ Sbjct: 287 ------YRIVERRPGDIAACYSDPAKAKAELGW------EAELD--ITQMCEDAWRWQ 330 >gi|295425264|ref|ZP_06817967.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] gi|295065040|gb|EFG55945.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] Length = 306 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 129/280 (46%), Gaps = 37/280 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++V GGAG+IGS + LV + V+V+D L Y G+ ++ ++ F Q DI Sbjct: 1 MRVLVIGGAGYIGSHAVKKLVAEGD-DVVVLDAL-YTGHRKAVDPKAK-----FYQGDIE 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + L++ + DA+++FAA S V S+ ++ N+ G LL Sbjct: 54 DTFLVSKILRDEKIDAVMHFAAYSLVPESVKRPLKYYDNNVNGMISLLRAM--------N 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY-GIP- 178 D ++ S+ YG K +ED P +P +PY TK + ++AW GI Sbjct: 106 DAGTKYLIFS-SSAATYGVPKKLPITEDTPLDPINPYGETKMMMEK-IMAWADKADGIKY 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V + G H PE LIP + I G F ++G DG NVRD+ Sbjct: 164 TALRYFNVAGAAEDGTIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYNTKDGTNVRDY 223 Query: 224 LYVEDHVRALYLVLK---KGRIGERYNIGGNNERKNIDIV 260 + VED + A L LK K + +N+G + N++I+ Sbjct: 224 VQVEDLIDAHILALKHLMKTNKSDVFNLGTAHGYSNLEIL 263 >gi|256851634|ref|ZP_05557022.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260661649|ref|ZP_05862561.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|282933283|ref|ZP_06338669.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|256615592|gb|EEU20781.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260547706|gb|EEX23684.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|281302579|gb|EFA94795.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 47/333 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAG+IGS L+ D V+V+D L Y G+ ++ + ++ F D+ Sbjct: 1 MRVLVTGGAGYIGSHTVNALLEDGN-DVVVLDNL-YTGHRQAVNKKAK-----FYHGDVL 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + + L + DA+++FAA V S+ ++ N+ G LL+ Sbjct: 54 DTNLVTNILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAM--------- 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGL-FSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP- 178 K + L S+ + K L E P NP +PY TK + ++ GI Sbjct: 105 -KTAGVKNLVFSSSAATYGVPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDQADGIKS 163 Query: 179 -------VLLSNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDW 223 V ++ + G H PE L+P + G+ F ++G DG NVRD+ Sbjct: 164 IALRYFNVAGASLDASIGEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDY 223 Query: 224 LYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTE 279 ++V D HV AL+ V+K + + +N+G N N++I+ + IP + Sbjct: 224 VHVVDLAQAHVLALHYVVKNQK-SDIFNLGSANGFSNLEILQSAIKVTGEDIPYTIG--- 279 Query: 280 LIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G DS+K ++ + W PQ + Sbjct: 280 -----PRRGGDPDSLVADSTKARTVLNWQPQHD 307 >gi|239981328|ref|ZP_04703852.1| putative UDP-glucose 4-epimerase [Streptomyces albus J1074] gi|291453182|ref|ZP_06592572.1| epimerase [Streptomyces albus J1074] gi|291356131|gb|EFE83033.1| epimerase [Streptomyces albus J1074] Length = 355 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/357 (25%), Positives = 140/357 (39%), Gaps = 55/357 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS + R L + +V D L A + ++ + D+ Sbjct: 1 MRVLVTGGAGFIGSQVVRELAA-AGHEAVVFDALLPAAHPGGHGPREARSVVA----DLR 55 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW------ 114 D E +R+AL DA+ + AA + + A ++ N +GT +LL E Sbjct: 56 DAERVRAALAGI--DAVCHQAAMVGLGKEFADAPAYVGCNDLGTAVLLAEMAAAGVRDLV 113 Query: 115 ------------WSCLSQDKK----------DQFRFLQISTDEVYGSLDKGLFSEDMPYN 152 + C D RF + E L GL +ED P + Sbjct: 114 VAGSMVVYGEGRYDCARHGTVRPGPRAAADLDAGRF-EPPCPECGAPLRPGLVAEDAPTD 172 Query: 153 PSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI-----TRMIE 207 P + Y+ATK + ++L AW G + N YGP P + + + Sbjct: 173 PRNVYAATKLAQEHLASAWSRATGGRAVALRYHNVYGP-GMPRDTPYAGVASFFRSALAR 231 Query: 208 GSHVFLYGDGQNVRDWLYVEDHVRA--LYLVLKKGR---IGERYNIGGNNERKNIDIVFE 262 G +Y DG RD+++V D A + L GR YN G+ E I Sbjct: 232 GEAPRVYEDGAQRRDFVHVRDVASANTVALAALAGREPGFFAAYNT-GSGEPHTIG---- 286 Query: 263 IGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNK 319 + A + ++ + E R G R DS +++ E+GW PQ G+ + Sbjct: 287 ---EMAAALAAAHGGPAPVVTGEYRLGDVRHVTADSRRLRDELGWKPQVGFAEGMAE 340 >gi|237732105|ref|ZP_04562586.1| GDP-D-mannose dehydratase in colanic acid gene cluster [Citrobacter sp. 30_2] gi|226907644|gb|EEH93562.1| GDP-D-mannose dehydratase in colanic acid gene cluster [Citrobacter sp. 30_2] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAELLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHSGNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + LKE QPD + N A SHV S + + IG+ LLE R L Sbjct: 65 LTDSSNLTRILKEVQPDEVYNLGAMSHVAVSFDSPEYTADVDAIGSLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|226366203|ref|YP_002783986.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] gi|226244693|dbj|BAH55041.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 51/334 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M+L+VTGGAG++GS +C ++ + +V+VID L+ GN +++ ++ F+ D+ Sbjct: 1 MKLLVTGGAGYVGS-VCSTVLLERGHEVVVIDDLS-TGNADAVPLGAE-----FIDGDVG 53 Query: 61 DREC---IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + S F D +++FAA+S V S+ +++ N++ T LLE R Sbjct: 54 EVAADVLGTSGTPRF--DGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRH---- 107 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 S +K F ST YG + +E P P++PY ATK + D+ + ++ + + Sbjct: 108 -SGTQKLVFS----STAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSL 162 Query: 178 PVLLSNCSNNYGPYH-------FPEKLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 N G Y LIPL + + + + ++G DG +RD+ Sbjct: 163 AATSLRYFNVAGAYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDY 222 Query: 224 LYVEDHVRALYLVLKKGRIGER--YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 ++V D A L L+ G YN+G GF + +I T L Sbjct: 223 IHVLDLAEAHVLALESSIEGRHRIYNLGSGA-----------GFSVREVISACARVTGLP 271 Query: 282 RFIEDRP---GHDRRYAIDSSKIKSEIGWFPQEN 312 +ED P G S + +E+GW P+ Sbjct: 272 IAVEDAPRRAGDPAVLVASSDRAIAELGWRPEHT 305 >gi|156543744|ref|XP_001605996.1| PREDICTED: similar to dtdp-glucose 4-6-dehydratase [Nasonia vitripennis] Length = 436 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 47/358 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKI---QVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 R++VTGGAGF+GS +LV+ L + +V+V+D N I N + Sbjct: 105 RILVTGGAGFVGS----HLVDRLMLAGHEVIVVDNFFTGRKRNVEHWIGHENF------E 154 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + + +R E D I + A+ + +L + I TN +GT + L Sbjct: 155 LVHHDVVRPLYVEV--DEIYHLASPASPPHYMLNPVKTIKTNTLGTI----------NML 202 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGH 173 K+ + L ST EVYG D+ SE P P + Y K ++ L A+ Sbjct: 203 GLAKRVGAKVLIASTSEVYGDPDEHPQSETYWGHVNPIGPRACYDEGKRVAETLSYAYER 262 Query: 174 TYGIPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR 231 + V ++ N YGP H + +++ I + ++ + + +YGDG+ R + YV D V Sbjct: 263 QENVAVRVARIFNTYGPRMHMNDGRVVSNFILQALQNNSITIYGDGKQTRSFQYVSDLVD 322 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L + L + NIG E + E ++ L+ + S + +ED P Sbjct: 323 GL-VALMASNYTQPINIGNPVEH----TIEEFARIIKDLVGGT-SKIVALAAVEDDP--- 373 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR------PLYKELKPDND 343 +R D S+ K + W + + GL KT+ ++ + PL + K D+D Sbjct: 374 QRRKPDISRAKKYLNWEAKVPLVEGLKKTITYFTKELQRSKYSLADNPLKRPFKNDHD 431 >gi|326495442|dbj|BAJ85817.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326512100|dbj|BAJ96031.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514322|dbj|BAJ96148.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326525513|dbj|BAJ88803.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326527729|dbj|BAK08139.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 438 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 30/349 (8%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQ 56 M ++VTG +GF+G A C + V+ ID Y +L ++ +S +F ++ Sbjct: 98 MSVLVTGASGFVG-AHCSLALRKRGDGVVGIDNFNAYYDPSLKKARKALLSSHGVF-VVE 155 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 DI D + +++ AA++ V ++ ++ +N+ G LLE + Sbjct: 156 GDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNVAGLVTLLE------A 209 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 C + D Q + S+ VYG DK FSE + P+S Y+ATK + + + ++ H Y Sbjct: 210 CKNADP--QPAIVWASSSSVYGLNDKVPFSESHRTDQPASLYAATKKAGEEITHSYNHIY 267 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITR-MIEGSHVFLYGDGQNV---RDWLYVEDHVR 231 G+ + YGP+ P+ + + TR +++G + +Y +V RD+ Y++D V+ Sbjct: 268 GLSITGLRFFTVYGPWGRPD-MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVK 326 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS------HTELIRFIE 285 L G GG +F +G +P S + + + Sbjct: 327 GCLGSLDTA--GRSTGTGGKKRGPAPYRIFNLGNTSPVTVPTLVSILEKHLRVKAKKHVV 384 Query: 286 DRPGH-DRRYA-IDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 + PG+ D + + S + ++G+ P N+++GL K V WYL + R Sbjct: 385 EMPGNGDVPFTHANISLARQQLGYKPTTNLDAGLKKFVKWYLSYYGYTR 433 >gi|315143284|gb|EFT87300.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2141] Length = 310 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVIVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLRSVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + Y + Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|302519039|ref|ZP_07271381.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB78] gi|302427934|gb|EFK99749.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB78] Length = 323 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 53/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +VTGGAG+IG+ + R L + V+V D L+ G L E S L Sbjct: 1 MTWLVTGGAGYIGAHVVRVLAG-AGVPVVVFDDLS-TGEAARLPEGVPLETGSVL----- 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 DR + + E + +++ A + V S+ + N+ G +LLE R Sbjct: 54 DRARLDAVFGEHRVTGVLHIAGKKQVAESVERPLHYYRENVEGLRVLLEAMR-------- 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 R + S+ VYG + L +ED P P SPY TK ++L+ YG+ + Sbjct: 106 -AAGVDRLVFSSSASVYGVPEPELVTEDTPCLPISPYGETKLIGEWLLRDASVAYGLRTI 164 Query: 181 LSNCSNNYGPYHFP-------EKLIPLAITRMIEGSHVFLYG------DGQNVRDWLYVE 227 N G P L+PL R+ G ++G DG VRD+++V+ Sbjct: 165 ALRYFNVVG-AGLPGLADKGAANLVPLIFERVDAGRPPLVFGDDYDTPDGTCVRDYVHVQ 223 Query: 228 DHVRALYLVLKK-----GRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI- 281 D A ++ I R NIG ++++ + K+ T+L+ Sbjct: 224 DIAEAHLAAARRLDEAPEGIALRLNIGRGEGSSVLEMIER--------VLKTTGRTDLVP 275 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWW-WRPLY 335 + RPG R + I++E+GW + GL++ + ++ W WR L+ Sbjct: 276 EVVPRRPGDAARCVASADAIRAELGW----SARYGLDEMI----ESAWQGWRHLH 322 >gi|194433541|ref|ZP_03065818.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae 1012] gi|194418133|gb|EDX34225.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae 1012] Length = 372 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 ++TG G GS L +L+ QV I + + N + I S +N F+ D Sbjct: 5 LITGVTGQDGSYLAEFLLEK-GYQVHGIKRRASSLNTERVDHIYQPPYSSNNNFTLHYGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +K+ PD + N A+SHV S + + +GT LLE R+ C Sbjct: 64 LTDTSNLVRLIKDISPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI---CG 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + K RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 LEKKT---RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITINYRESYGMY 177 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G L+ G+ ++RDW + D+VR + Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANISQGIENCLHLGNMDSLRDWGHARDYVRMQW 237 Query: 235 LVLKK 239 ++L++ Sbjct: 238 MMLQQ 242 >gi|254991686|ref|ZP_05273876.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-064] gi|255522277|ref|ZP_05389514.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-175] Length = 327 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 149/333 (44%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID L G+ S+ + ++ F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELITR-GYEVVVIDNLR-TGHKESIHKKAK-----FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +V+FAA S V S+ ++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVVHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 ---EQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A ++ + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|153800737|ref|ZP_01955323.1| UDP-glucose 4-epimerase [Vibrio cholerae MZO-3] gi|124123712|gb|EAY42455.1| UDP-glucose 4-epimerase [Vibrio cholerae MZO-3] Length = 338 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGG G+IGS C ++ + +++D L Y + L I + F+Q D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQ-AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +++ + +A+V+FA V S+ E+ N+ GT +L+ R Sbjct: 59 IRDKALLVDLMQQHKIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +E P ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ S G P P L+P +T++ G +L +G DG Sbjct: 170 SITLLRYFNPV-GSHPSGELGEDPQGIPNNLMPF-VTQVAVGRREYLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIG-----ERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D LKK +G YN+G +D+V FE Sbjct: 228 GVRDYIHVMDLADGHIAALKK--VGTCAGLHIYNLGTGKGYSVLDVVKAFET-------- 277 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + T + ++ RPG Y D +K ++GW N+ + CW +N Sbjct: 278 --ASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNN 331 >gi|300917116|ref|ZP_07133806.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 115-1] gi|300415635|gb|EFJ98945.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 115-1] gi|320172660|gb|EFW47895.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae CDC 74-1112] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|298161980|gb|ADI59431.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 16/247 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV-D 58 ++TG G GS L +L+ + +V I + + N + + I Q +N FL D Sbjct: 6 LITGITGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N A+SHV S + + +GT LLE R+ Sbjct: 65 LTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI----- 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 120 -NGLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ + G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKKGR 241 ++L++ + Sbjct: 239 MMLQQDK 245 >gi|110642263|ref|YP_669993.1| GDP-mannose 4,6-dehydratase [Escherichia coli 536] gi|191169944|ref|ZP_03031498.1| GDP-mannose 4,6-dehydratase [Escherichia coli F11] gi|300981688|ref|ZP_07175674.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 200-1] gi|110343855|gb|ABG70092.1| GDP-mannose 4,6-dehydratase [Escherichia coli 536] gi|190909460|gb|EDV69045.1| GDP-mannose 4,6-dehydratase [Escherichia coli F11] gi|300307489|gb|EFJ62009.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 200-1] gi|324013898|gb|EGB83117.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 60-1] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|15802533|ref|NP_288559.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 EDL933] gi|15832112|ref|NP_310885.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. Sakai] gi|16129993|ref|NP_416557.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. MG1655] gi|24113438|ref|NP_707948.1| GDP-D-mannose dehydratase [Shigella flexneri 2a str. 301] gi|26248427|ref|NP_754467.1| GDP-mannose 4,6-dehydratase [Escherichia coli CFT073] gi|30063504|ref|NP_837675.1| GDP-D-mannose dehydratase [Shigella flexneri 2a str. 2457T] gi|74312578|ref|YP_310997.1| GDP-D-mannose dehydratase [Shigella sonnei Ss046] gi|82543430|ref|YP_407377.1| GDP-D-mannose dehydratase [Shigella boydii Sb227] gi|89108873|ref|AP_002653.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. W3110] gi|91211340|ref|YP_541326.1| subunit of GDP-mannose 4,6-dehydratase [Escherichia coli UTI89] gi|117624249|ref|YP_853162.1| GDP-mannose 4,6-dehydratase [Escherichia coli APEC O1] gi|157155501|ref|YP_001463406.1| GDP-mannose 4,6-dehydratase [Escherichia coli E24377A] gi|168750437|ref|ZP_02775459.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|168757952|ref|ZP_02782959.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|168761796|ref|ZP_02786803.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|168769807|ref|ZP_02794814.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|168775497|ref|ZP_02800504.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|168782338|ref|ZP_02807345.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|168788723|ref|ZP_02813730.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|168799064|ref|ZP_02824071.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|170019620|ref|YP_001724574.1| GDP-mannose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|170081683|ref|YP_001731003.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. DH10B] gi|170680092|ref|YP_001743088.1| GDP-mannose 4,6-dehydratase [Escherichia coli SMS-3-5] gi|187732879|ref|YP_001879825.1| GDP-mannose 4,6-dehydratase [Shigella boydii CDC 3083-94] gi|188495761|ref|ZP_03003031.1| GDP-mannose 4,6-dehydratase [Escherichia coli 53638] gi|193062886|ref|ZP_03043979.1| GDP-mannose 4,6-dehydratase [Escherichia coli E22] gi|194435974|ref|ZP_03068076.1| GDP-mannose 4,6-dehydratase [Escherichia coli 101-1] gi|195938246|ref|ZP_03083628.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Escherichia coli O157:H7 str. EC4024] gi|208808157|ref|ZP_03250494.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208817122|ref|ZP_03258214.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208819413|ref|ZP_03259733.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209400542|ref|YP_002271296.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|209919518|ref|YP_002293602.1| GDP-mannose 4,6-dehydratase [Escherichia coli SE11] gi|215487276|ref|YP_002329707.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O127:H6 str. E2348/69] gi|217329621|ref|ZP_03445700.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|218549468|ref|YP_002383259.1| GDP-D-mannose dehydratase [Escherichia fergusonii ATCC 35469] gi|218554621|ref|YP_002387534.1| GDP-D-mannose dehydratase [Escherichia coli IAI1] gi|218558932|ref|YP_002391845.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli S88] gi|218690111|ref|YP_002398323.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli ED1a] gi|218695676|ref|YP_002403343.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli 55989] gi|218699355|ref|YP_002406984.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli IAI39] gi|218705586|ref|YP_002413105.1| GDP-D-mannose dehydratase [Escherichia coli UMN026] gi|237704508|ref|ZP_04534989.1| GDP-D-mannose dehydratase [Escherichia sp. 3_2_53FAA] gi|238901243|ref|YP_002927039.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli BW2952] gi|253773015|ref|YP_003035846.1| GDP-mannose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162045|ref|YP_003045153.1| GDP-D-mannose dehydratase [Escherichia coli B str. REL606] gi|254793837|ref|YP_003078674.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O157:H7 str. TW14359] gi|256017775|ref|ZP_05431640.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Shigella sp. D9] gi|256022255|ref|ZP_05436120.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Escherichia sp. 4_1_40B] gi|260844664|ref|YP_003222442.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O103:H2 str. 12009] gi|260856036|ref|YP_003229927.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O26:H11 str. 11368] gi|261225100|ref|ZP_05939381.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257554|ref|ZP_05950087.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291283293|ref|YP_003500111.1| GDP-mannose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|293410416|ref|ZP_06653992.1| GDP-mannose 4,6-dehydratase [Escherichia coli B354] gi|293446409|ref|ZP_06662831.1| GDP-mannose 4,6-dehydratase [Escherichia coli B088] gi|298381211|ref|ZP_06990810.1| GDP-mannose 4,6-dehydratase [Escherichia coli FVEC1302] gi|300816680|ref|ZP_07096901.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 107-1] gi|300821841|ref|ZP_07101986.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300899790|ref|ZP_07118010.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 198-1] gi|300921743|ref|ZP_07137909.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 182-1] gi|300928199|ref|ZP_07143740.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 187-1] gi|300978942|ref|ZP_07174455.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 45-1] gi|301021276|ref|ZP_07185307.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 69-1] gi|301026336|ref|ZP_07189786.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 196-1] gi|301048780|ref|ZP_07195778.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 185-1] gi|306814823|ref|ZP_07448985.1| GDP-mannose 4,6-dehydratase [Escherichia coli NC101] gi|307312384|ref|ZP_07592018.1| GDP-mannose 4,6-dehydratase [Escherichia coli W] gi|312967285|ref|ZP_07781501.1| GDP-mannose 4,6-dehydratase [Escherichia coli 2362-75] gi|331647705|ref|ZP_08348797.1| GDP-mannose 4,6-dehydratase [Escherichia coli M605] gi|331653480|ref|ZP_08354481.1| GDP-mannose 4,6-dehydratase [Escherichia coli M718] gi|331658133|ref|ZP_08359095.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA206] gi|331663545|ref|ZP_08364455.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA143] gi|331673582|ref|ZP_08374345.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA280] gi|331677962|ref|ZP_08378637.1| GDP-mannose 4,6-dehydratase [Escherichia coli H591] gi|332278793|ref|ZP_08391206.1| GDP-mannose 4,6-dehydratase [Shigella sp. D9] gi|81175345|sp|P0AC90|GM4D_ECO57 RecName: Full=GDP-mannose 4,6-dehydratase; AltName: Full=GDP-D-mannose dehydratase gi|81175346|sp|P0AC89|GM4D_ECOL6 RecName: Full=GDP-mannose 4,6-dehydratase; AltName: Full=GDP-D-mannose dehydratase gi|81175347|sp|P0AC88|GM4D_ECOLI RecName: Full=GDP-mannose 4,6-dehydratase; AltName: Full=GDP-D-mannose dehydratase gi|81175348|sp|P0AC91|GM4D_SHIFL RecName: Full=GDP-mannose 4,6-dehydratase; AltName: Full=GDP-D-mannose dehydratase gi|12516247|gb|AAG57113.1|AE005431_5 GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. EDL933] gi|26108831|gb|AAN81034.1|AE016762_287 GDP-mannose 4,6-dehydratase [Escherichia coli CFT073] gi|1407612|gb|AAC77842.1| GDP-D-mannose dehydratase [Escherichia coli] gi|1736759|dbj|BAA15909.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K12 substr. W3110] gi|1788366|gb|AAC75114.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. MG1655] gi|13362326|dbj|BAB36281.1| GDP-D-mannose dehydratase [Escherichia coli O157:H7 str. Sakai] gi|24052464|gb|AAN43655.1| GDP-D-mannose dehydratase [Shigella flexneri 2a str. 301] gi|30041757|gb|AAP17484.1| GDP-D-mannose dehydratase [Shigella flexneri 2a str. 2457T] gi|73856055|gb|AAZ88762.1| GDP-D-mannose dehydratase [Shigella sonnei Ss046] gi|81244841|gb|ABB65549.1| GDP-D-mannose dehydratase [Shigella boydii Sb227] gi|91072914|gb|ABE07795.1| subunit of GDP-mannose 4,6-dehydratase [Escherichia coli UTI89] gi|115513373|gb|ABJ01448.1| GDP-mannose 4,6-dehydratase [Escherichia coli APEC O1] gi|157077531|gb|ABV17239.1| GDP-mannose 4,6-dehydratase [Escherichia coli E24377A] gi|168986319|dbj|BAG11859.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O55:H7] gi|168986378|dbj|BAG11917.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O55:H7] gi|168986435|dbj|BAG11973.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O55:H6] gi|169754548|gb|ACA77247.1| GDP-mannose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|169889518|gb|ACB03225.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli str. K-12 substr. DH10B] gi|170517810|gb|ACB15988.1| GDP-mannose 4,6-dehydratase [Escherichia coli SMS-3-5] gi|187429871|gb|ACD09145.1| GDP-mannose 4,6-dehydratase [Shigella boydii CDC 3083-94] gi|187768950|gb|EDU32794.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|188015395|gb|EDU53517.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|188490960|gb|EDU66063.1| GDP-mannose 4,6-dehydratase [Escherichia coli 53638] gi|189000085|gb|EDU69071.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|189355154|gb|EDU73573.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|189361242|gb|EDU79661.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|189367768|gb|EDU86184.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|189371539|gb|EDU89955.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|189378438|gb|EDU96854.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|192931529|gb|EDV84130.1| GDP-mannose 4,6-dehydratase [Escherichia coli E22] gi|194424702|gb|EDX40687.1| GDP-mannose 4,6-dehydratase [Escherichia coli 101-1] gi|208727958|gb|EDZ77559.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208730741|gb|EDZ79431.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208739536|gb|EDZ87218.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209161942|gb|ACI39375.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|209748080|gb|ACI72347.1| GDP-D-mannose dehydratase [Escherichia coli] gi|209748082|gb|ACI72348.1| GDP-D-mannose dehydratase [Escherichia coli] gi|209748084|gb|ACI72349.1| GDP-D-mannose dehydratase [Escherichia coli] gi|209912777|dbj|BAG77851.1| GDP-mannose 4,6-dehydratase [Escherichia coli SE11] gi|215265348|emb|CAS09743.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O127:H6 str. E2348/69] gi|217317389|gb|EEC25818.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|218352408|emb|CAU98182.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli 55989] gi|218357009|emb|CAQ89640.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia fergusonii ATCC 35469] gi|218361389|emb|CAQ98976.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli IAI1] gi|218365701|emb|CAR03437.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli S88] gi|218369341|emb|CAR17099.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli IAI39] gi|218427675|emb|CAR08584.2| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli ED1a] gi|218432683|emb|CAR13577.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli UMN026] gi|222033819|emb|CAP76560.1| GDP-mannose 4,6-dehydratase [Escherichia coli LF82] gi|226900874|gb|EEH87133.1| GDP-D-mannose dehydratase [Escherichia sp. 3_2_53FAA] gi|238861287|gb|ACR63285.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli BW2952] gi|253324059|gb|ACT28661.1| GDP-mannose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973946|gb|ACT39617.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli B str. REL606] gi|253978140|gb|ACT43810.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli BL21(DE3)] gi|254593237|gb|ACT72598.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O157:H7 str. TW14359] gi|257754685|dbj|BAI26187.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O26:H11 str. 11368] gi|257759811|dbj|BAI31308.1| GDP-D-mannose dehydratase, NAD(P)-binding [Escherichia coli O103:H2 str. 12009] gi|260448847|gb|ACX39269.1| GDP-mannose 4,6-dehydratase [Escherichia coli DH1] gi|281179152|dbj|BAI55482.1| GDP-mannose 4,6-dehydratase [Escherichia coli SE15] gi|281601507|gb|ADA74491.1| GDP-mannose 4,6-dehydratase [Shigella flexneri 2002017] gi|284922046|emb|CBG35124.1| GDP-mannose 4,6-dehydratase [Escherichia coli 042] gi|290763166|gb|ADD57127.1| GDP-mannose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|291323239|gb|EFE62667.1| GDP-mannose 4,6-dehydratase [Escherichia coli B088] gi|291470884|gb|EFF13368.1| GDP-mannose 4,6-dehydratase [Escherichia coli B354] gi|294491648|gb|ADE90404.1| GDP-mannose 4,6-dehydratase [Escherichia coli IHE3034] gi|298278653|gb|EFI20167.1| GDP-mannose 4,6-dehydratase [Escherichia coli FVEC1302] gi|299879727|gb|EFI87938.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 196-1] gi|300299365|gb|EFJ55750.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 185-1] gi|300356669|gb|EFJ72539.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 198-1] gi|300398202|gb|EFJ81740.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 69-1] gi|300409575|gb|EFJ93113.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 45-1] gi|300421881|gb|EFK05192.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 182-1] gi|300463794|gb|EFK27287.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 187-1] gi|300525683|gb|EFK46752.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300530910|gb|EFK51972.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 107-1] gi|305852217|gb|EFM52669.1| GDP-mannose 4,6-dehydratase [Escherichia coli NC101] gi|306907555|gb|EFN38058.1| GDP-mannose 4,6-dehydratase [Escherichia coli W] gi|307626402|gb|ADN70706.1| GDP-mannose 4,6-dehydratase [Escherichia coli UM146] gi|309702377|emb|CBJ01699.1| GDP-mannose 4,6-dehydratase [Escherichia coli ETEC H10407] gi|312288093|gb|EFR15997.1| GDP-mannose 4,6-dehydratase [Escherichia coli 2362-75] gi|312946676|gb|ADR27503.1| GDP-D-mannose dehydratase, NAD(P)-binding protein [Escherichia coli O83:H1 str. NRG 857C] gi|313649909|gb|EFS14329.1| GDP-mannose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|313848677|emb|CAQ32465.2| GDP-mannose 4,6-dehydratase [Escherichia coli BL21(DE3)] gi|315061326|gb|ADT75653.1| GDP-D-mannose dehydratase [Escherichia coli W] gi|315136687|dbj|BAJ43846.1| GDP-mannose 4,6-dehydratase [Escherichia coli DH1] gi|315285673|gb|EFU45115.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 110-3] gi|315294426|gb|EFU53774.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 153-1] gi|315299461|gb|EFU58712.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 16-3] gi|315618168|gb|EFU98759.1| GDP-mannose 4,6-dehydratase [Escherichia coli 3431] gi|320191780|gb|EFW66428.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. EC1212] gi|320198744|gb|EFW73344.1| GDP-mannose 4,6-dehydratase [Escherichia coli EC4100B] gi|320646719|gb|EFX15606.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H- str. 493-89] gi|320651996|gb|EFX20349.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H- str. H 2687] gi|320663290|gb|EFX30595.1| GDP-mannose 4,6-dehydratase [Escherichia coli O55:H7 str. USDA 5905] gi|320668079|gb|EFX34958.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. LSU-61] gi|323152444|gb|EFZ38732.1| GDP-mannose 4,6-dehydratase [Escherichia coli EPECa14] gi|323161862|gb|EFZ47738.1| GDP-mannose 4,6-dehydratase [Escherichia coli E128010] gi|323168826|gb|EFZ54506.1| GDP-mannose 4,6-dehydratase [Shigella sonnei 53G] gi|323172640|gb|EFZ58274.1| GDP-mannose 4,6-dehydratase [Escherichia coli LT-68] gi|323187803|gb|EFZ73101.1| GDP-mannose 4,6-dehydratase [Escherichia coli RN587/1] gi|323378094|gb|ADX50362.1| GDP-mannose 4,6-dehydratase [Escherichia coli KO11] gi|323936858|gb|EGB33142.1| GDP-mannose 4,6-dehydratase [Escherichia coli E1520] gi|323948433|gb|EGB44416.1| GDP-mannose 4,6-dehydratase [Escherichia coli H120] gi|323951805|gb|EGB47679.1| GDP-mannose 4,6-dehydratase [Escherichia coli H252] gi|323956087|gb|EGB51839.1| GDP-mannose 4,6-dehydratase [Escherichia coli H263] gi|323961742|gb|EGB57344.1| GDP-mannose 4,6-dehydratase [Escherichia coli H489] gi|323968187|gb|EGB63596.1| GDP-mannose 4,6-dehydratase [Escherichia coli M863] gi|323977787|gb|EGB72873.1| GDP-mannose 4,6-dehydratase [Escherichia coli TW10509] gi|324006468|gb|EGB75687.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 57-2] gi|324019230|gb|EGB88449.1| GDP-mannose 4,6-dehydratase [Escherichia coli MS 117-3] gi|324114014|gb|EGC07987.1| GDP-mannose 4,6-dehydratase [Escherichia fergusonii B253] gi|324119082|gb|EGC12971.1| GDP-mannose 4,6-dehydratase [Escherichia coli E1167] gi|325497872|gb|EGC95731.1| GDP-D-mannose dehydratase [Escherichia fergusonii ECD227] gi|326338410|gb|EGD62238.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. 1044] gi|326347067|gb|EGD70800.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. 1125] gi|327253185|gb|EGE64839.1| GDP-mannose 4,6-dehydratase [Escherichia coli STEC_7v] gi|330911890|gb|EGH40400.1| GDP-mannose 4,6-dehydratase [Escherichia coli AA86] gi|331043429|gb|EGI15567.1| GDP-mannose 4,6-dehydratase [Escherichia coli M605] gi|331048329|gb|EGI20405.1| GDP-mannose 4,6-dehydratase [Escherichia coli M718] gi|331056381|gb|EGI28390.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA206] gi|331059344|gb|EGI31321.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA143] gi|331068855|gb|EGI40247.1| GDP-mannose 4,6-dehydratase [Escherichia coli TA280] gi|331074422|gb|EGI45742.1| GDP-mannose 4,6-dehydratase [Escherichia coli H591] gi|332097043|gb|EGJ02026.1| GDP-mannose 4,6-dehydratase [Shigella boydii 3594-74] gi|332101145|gb|EGJ04491.1| GDP-mannose 4,6-dehydratase [Shigella sp. D9] gi|332343834|gb|AEE57168.1| GDP-mannose 4,6-dehydratase [Escherichia coli UMNK88] gi|332756689|gb|EGJ87038.1| GDP-mannose 4,6-dehydratase [Shigella flexneri K-671] gi|332756806|gb|EGJ87151.1| GDP-mannose 4,6-dehydratase [Shigella flexneri 2747-71] gi|332766398|gb|EGJ96607.1| GDP-mannose 4,6-dehydratase [Shigella flexneri 2930-71] gi|333002388|gb|EGK21950.1| GDP-mannose 4,6-dehydratase [Shigella flexneri K-218] gi|333002565|gb|EGK22126.1| GDP-mannose 4,6-dehydratase [Shigella flexneri VA-6] gi|333003396|gb|EGK22940.1| GDP-mannose 4,6-dehydratase [Shigella flexneri K-272] gi|333017172|gb|EGK36493.1| GDP-mannose 4,6-dehydratase [Shigella flexneri K-304] gi|333017225|gb|EGK36545.1| GDP-mannose 4,6-dehydratase [Shigella flexneri K-227] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|323183835|gb|EFZ69226.1| GDP-mannose 4,6-dehydratase [Escherichia coli 1357] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|198432653|ref|XP_002127542.1| PREDICTED: similar to UDP-glucuronate decarboxylase 1 [Ciona intestinalis] Length = 409 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 37/331 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ + +V V+D N I N F + D+ Sbjct: 87 RILVTGGAGFVGSHLVDKLMM-MGHEVTVVDNFFTGRKRNVEHWIGHEN-FELIHHDVIS 144 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A + + + I T+ +GT + L Sbjct: 145 PLFI-------EVDQIYHLACPASPPHYMYNPVKTIKTSSMGTM----------NMLGLA 187 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + L ST E+YG ++ E P P + Y K ++ + A+ Sbjct: 188 KRVRATMLLASTSEIYGDPEEHPQKETYWGHVNPIGPRACYDEGKRVAETMCYAYSSQDK 247 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++ + +YG+G+ R + YV D V L Sbjct: 248 VDVRVARIFNTFGPRMHMQDGRVVSNFILQSLQNEPITIYGNGEQTRSFQYVTDLVNGL- 306 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-RR 293 + L ++ NIG E + E L+ L + S +E++ + P D R+ Sbjct: 307 IALMNSKVNTPVNIGNPEEH----TISEFATLIRNL---TKSKSEIVH--KATPTDDPRK 357 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K K+ +GW P +E+GL KT+ ++ Sbjct: 358 RKPDITKAKTSLGWEPVVELETGLKKTIAYF 388 >gi|6573398|pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 5 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 64 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 120 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 177 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237 Query: 235 LVLKK 239 ++L++ Sbjct: 238 MMLQQ 242 >gi|296444523|ref|ZP_06886488.1| GDP-mannose 4,6-dehydratase [Methylosinus trichosporium OB3b] gi|296258170|gb|EFH05232.1| GDP-mannose 4,6-dehydratase [Methylosinus trichosporium OB3b] Length = 328 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 34/333 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG-NLNSLKEISQSNLFSFLQVDIC 60 R ++TG G G+ L + L++ VI + ++ G + L+ + ++ + D+ Sbjct: 4 RALLTGITGQDGAYLAQLLLSKGYEVCGVIRRSSHRGVEDHRLRWLGVADKVRLIDGDLA 63 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNI--IGTFILLEETRLWWSCL 118 D + ++E +P I N AA+S V S +T NI +G +LE TR+ Sbjct: 64 DLSSLLRIVQEVEPQEIYNLAAQSFVASSW--RQPILTANITAVGVANMLEATRI----- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 Q RF Q S+ E++G + + + SE P+ P SPY+ K ++ + + ++G+ Sbjct: 117 ---AAPQARFYQASSSEMFGLIQEPMQSEKTPFYPRSPYAVAKLYGHWITVNYRESFGLH 173 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSHVFL-YGDGQNVRDWLYVEDHVRALY 234 N+ P F + + A+ R+ G L G+ RDW + D+VRA++ Sbjct: 174 ASSGILFNHESPLRGVEFVTRKVSDAVARIKLGKAKELRLGNIDAKRDWGHARDYVRAMW 233 Query: 235 LVLKKGRIGERYNIGGNNE--RKNIDIVF-EIGFLLDALI---PKSYSHTELIRFIEDRP 288 ++L++ + G R I F G ++A + P Y RP Sbjct: 234 MMLQQETPDDYVVATGRTTTVRDMCRIAFAHAGLDMEAHVVIDPAFY-----------RP 282 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 D+SK ++ +GW PQ +E + + V Sbjct: 283 AEVDILLGDASKARAALGWEPQTGLEEMIREMV 315 >gi|293405526|ref|ZP_06649518.1| LOW QUALITY PROTEIN: GDP-mannose 4,6-dehydratase [Escherichia coli FVEC1412] gi|291427734|gb|EFF00761.1| LOW QUALITY PROTEIN: GDP-mannose 4,6-dehydratase [Escherichia coli FVEC1412] Length = 374 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|15903503|ref|NP_359053.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae R6] gi|116516336|ref|YP_816889.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae D39] gi|15459117|gb|AAL00264.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae R6] gi|116076912|gb|ABJ54632.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae D39] Length = 339 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 58/358 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 +++VTGGAGFIG+ L+ QV+V+D L + N SL+ + + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELIQ-AGHQVVVVDNLVNS-NRKSLEVVERITGVEIPFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K+ +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDYL 167 ++ + + S+ VYG ED P + ++PY TK A S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYGD------G 217 V+ Y P+ ++ S + G P P L+P +T++ G V ++GD G Sbjct: 173 VVLL--RYFNPIG-AHESGDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDG 228 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D + LKK + G YN+G ++I+ + + IP Sbjct: 229 TGVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGCPIP-- 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +E RPG D +K K+E+GW E+ L+ + ++ W W+ Sbjct: 287 ------YRIVERRPGDIAACYSDPAKAKAELGW------EAELD--ITQMCEDAWRWQ 330 >gi|218887138|ref|YP_002436459.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758092|gb|ACL08991.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 335 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 59/358 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNL--NSLKEISQSNLFSFLQ 56 M ++VTG AGFIG L R + + V+ +D L Y L + LK++ F+F Q Sbjct: 1 MHILVTGAAGFIGYHLSRRFL-EAGHTVVGLDCLNDYYDVQLKKDRLKQLEPYPGFAFAQ 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 +D+ D + + + +VN AA++ V S+ ++ +N++G +LE R Sbjct: 60 LDMADDAGMDALFAGQKFTHVVNLAAQAGVRYSLKNPRSYVQSNLVGFGNILEGCR---- 115 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVL 169 + S+ VYG + MP+ +P S Y+A+K +++ + Sbjct: 116 -----HNGVQHLVYASSSSVYG------LNTAMPFSVHHNVDHPISLYAASKKANELMAH 164 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + H Y +P YGP+ P+ + L ++EG + ++ +G+ RD+ Y+ D Sbjct: 165 TYSHLYRLPTTGLRFFTVYGPWGRPDMALYLFTRAILEGKPINVFNEGRMRRDFTYIGDI 224 Query: 230 VRALYLVLKKG---------------------RIGERYNIGGNNERKNIDIVFEIGFLLD 268 V + V ++ RI YNIG NN E+G ++ Sbjct: 225 VEGVVRVTERTPQPNPEWRGDAPDPSTSPAPYRI---YNIGNNN-------AVELGRFIE 274 Query: 269 ALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++ + + +PG D + + G+ P +E G+ V W+ D Sbjct: 275 -ILEDCLGRKAVRNLMPMQPGDVEATYADVDDLIRDTGFKPHTPLEQGIEAFVRWFRD 331 >gi|194016409|ref|ZP_03055023.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] gi|194011882|gb|EDW21450.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ + +V+V+D L G+ ++ E + + D+ Sbjct: 1 MTILVCGGAGYIGSHAVAALLAKGE-RVVVVDNLQ-TGHKEAVLEGA-----VLEEGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R K Q +A+++FAA+S V S+ ++ N+ G LL+ Sbjct: 54 DHAFLRQVFKRHQIEAVMHFAADSLVGESVTDPLKYYNNNVGGATALLQ---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG-HTYGIPV 179 ++ D + ST YG + E NP++PY TK + + + L W YGI Sbjct: 105 NEFDVKHIVFSSTAAAYGEPMRVPIDETDETNPTNPYGETKLAIEKM-LKWSEQAYGIEY 163 Query: 180 LLSNCSNNYGPY--------HFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 ++ N G + H PE L+P+ + + + + +YG DG +RD+ Sbjct: 164 VVLRYFNVAGAHTEGLVGEDHQPETHLVPIILQVALGKRDQIMIYGDDYETEDGTCIRDY 223 Query: 224 LYVEDHVRALYLVLKKGRIGE---RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D V A L + + R G+ YN+G F + +++A + K H Sbjct: 224 IHVMDLVEAHILAVDRLRAGKGSATYNLGNGTG-------FSVKQVVEA-VRKVTGHAIP 275 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + R G + S K E+GW PQ Sbjct: 276 AQVAKRRAGDPAKLIASSEKALQELGWTPQ 305 >gi|162455060|ref|YP_001617427.1| dTDP-glucose 4,6-dehydratase [Sorangium cellulosum 'So ce 56'] gi|161165642|emb|CAN96947.1| dTDP-glucose 4,6-dehydratase [Sorangium cellulosum 'So ce 56'] Length = 335 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 146/331 (44%), Gaps = 41/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 +R++VTGGAGF+GS LC L+ + +V+ +D L+ G+ +++ + F ++ D+ Sbjct: 5 LRILVTGGAGFVGSHLCDRLIREGH-EVVALDDLS-TGSRDNVAHLLSHRRFRLVEHDV- 61 Query: 61 DRECIRSALKEFQPDAIVNFAAES---HVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 + E + D I N A+ + H R + + T ++ L +L C Sbjct: 62 ------TLPYEREVDRIYNLASPASPPHYQR------DPVRTTLVNVLGALHALKLAEGC 109 Query: 118 LSQDKKDQFRFLQISTDEVYGSLD-----KGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + R Q ST EVYG + +G P S Y K ++ L++ + Sbjct: 110 GA-------RVFQASTSEVYGDPEVHPQPEGYRGAVNPIGIRSCYDEGKRCAESLLMDF- 161 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 H G+ V L+ N YGP + +++ I + + G + +YGDG R + YVED + Sbjct: 162 HRRGVEVRLARIFNTYGPRMALDDGRVVSNFIVQALRGEDLTVYGDGSQTRSFCYVEDLI 221 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + +++ N+G E +++ E+ L S ED P Sbjct: 222 EGIVRLMEHPAETGPVNLGNPEEFTVLELAEEVLHLT-----GSRGRVVFRPLPEDDP-R 275 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R+ ID + + +G+ P+ + +GL +T+ Sbjct: 276 QRQPVID--RARRVLGFEPKVPLRTGLRRTI 304 >gi|149278943|ref|ZP_01885077.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [Pedobacter sp. BAL39] gi|149230222|gb|EDM35607.1| dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein [Pedobacter sp. BAL39] Length = 329 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 148/332 (44%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALC-RYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R+++TG AGF+GS LC R++ D V+ +D L G+L +++ + + F F+ D+ Sbjct: 5 RVLITGAAGFLGSHLCDRFIKEDY--HVIAMDNLI-TGDLQNIEHLFKLENFEFVHHDVS 61 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + L D I++FA+ + + + + +GT LL L++ Sbjct: 62 KYVYVSGEL-----DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLL--------GLAK 108 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 +K R L ST EVYG E+ P P Y K + + +A+ + Sbjct: 109 NKNA--RMLIASTSEVYGDPSVNPQPEEYWGNVNPVGPRGVYDEAKRFQEAMTMAYHTFH 166 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ + N YGP +++P I + + G + ++GDG R + YV+D V + Sbjct: 167 GVETRIVRIFNTYGPRMRLNDGRVLPAFIGQALRGEDLTVFGDGSQTRSFCYVDDLVEGI 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 Y +L + NIG +E I + +I + + +L+ + D P D + Sbjct: 227 YRLLLSD-YAQPVNIGNPDE-------ITIKQFGEEIIKLTGTSQKLV--LRDLPVDDPK 276 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D +K K+ +GW P+ + GL T ++ Sbjct: 277 QRRPDITKAKALLGWEPKVSRAEGLKITYEYF 308 >gi|308812911|ref|XP_003083762.1| nucleotide-sugar epimerase (ISS) [Ostreococcus tauri] gi|116055644|emb|CAL57729.1| nucleotide-sugar epimerase (ISS) [Ostreococcus tauri] Length = 487 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 22/271 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYA--GNLNSLKEISQSNLFSFLQVDICD 61 +VTGGAGFIGS + R L+ D+ ++V V+D L+ L + + ++F++ D+ Sbjct: 173 LVTGGAGFIGSEVVRQLL-DIGMRVRVLDDLSTGSPAKLAFAQAAQKEGRYAFVKGDVRK 231 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSI-LGADEF----ITTNIIGTFILLEETRLWWS 116 E + A+ D + + AA S V ++ G ++ + +N+ GT +L TR S Sbjct: 232 YEDVSRAMNGV--DFVFHLAAVSKVKPTLDFGREDVVLACVESNVRGTENVLRATRARDS 289 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY--NPSSPYSATKASSDYLVLAWGHT 174 D++ RF+ + + YG+ F E+ + +SPY+ TKA + L + Sbjct: 290 --GGDRR--ARFVYVGSSTYYGNQPT-PFDEERTHLRTTTSPYATTKAQGEDLARLYYSL 344 Query: 175 YGIPVLLSNCSNNYGPYHFPEKLIPLAITRMI----EGSHVFLYGDGQNVRDWLYVEDHV 230 YG+ +++ YGP E + R +G + + GDG RD+++V D Sbjct: 345 YGVEAVVTRIFMVYGPGEPAEAEQAVVTGRFFAAASKGDALEIEGDGSQFRDFIHVSDAA 404 Query: 231 RALYL-VLKKGRIGERYNIGGNNERKNIDIV 260 R + L +G G +NIG +D+ Sbjct: 405 RGIVLAAFAEGAPGRTFNIGSGKSTTILDLA 435 >gi|327189736|gb|EGE56882.1| UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512] Length = 327 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 44/326 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +C+ L I V D L+ G+ +S++ ++ ++ D Sbjct: 5 ILVTGGAGFIGSHICKALSRAGMIPV-TYDNLS-TGHADSVR------WGPLIRGELGDA 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R + EF PD +++ A ++V S++ ++ N++G+ LLE +CL QD Sbjct: 57 VALRRTMAEFSPDCVIHCGANAYVGESVVMPRKYYRNNVVGSLTLLE------ACLDQDI 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + ST YG E+ P P +PY TK + + + YGI Sbjct: 111 D---RIVFSSTCATYGVPASLPIREETPQQPVNPYGRTKLIFEMALEDFAAAYGIRFAAL 167 Query: 183 NCSNNYGP--------YHFPEK-LIP---LAITRMIEGSHVF----LYGDGQNVRDWLYV 226 N G H PE LIP LA +E +F DG +RD+++V Sbjct: 168 RYFNAAGADPDGELAERHEPETHLIPRALLAAAGRLERLDIFGTDYSTADGTCIRDYVHV 227 Query: 227 EDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 D +A L G N+G +I+ A I ++ +R+ Sbjct: 228 SDLAQAHLAAVNHLMAGGDSLSVNLGSGRGTSVREIL--------AAIHRTTGREVPVRY 279 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFP 309 R G ++++ K+E+G+ P Sbjct: 280 RSRRAGDPPILFANTARAKAELGFAP 305 >gi|320641349|gb|EFX10804.1| GDP-mannose 4,6-dehydratase [Escherichia coli O157:H7 str. G5101] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q + F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|15891619|ref|NP_357291.1| dTDP-glucose 4-6-dehydratase [Agrobacterium tumefaciens str. C58] gi|15160060|gb|AAK90076.1| dTDP-glucose 4-6-dehydratase [Agrobacterium tumefaciens str. C58] Length = 340 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 144/337 (42%), Gaps = 45/337 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 R++V GGAGF+GS LC L++ +V+ +D L+ G +++ + + F ++ D+ Sbjct: 23 QRVLVNGGAGFLGSHLCERLLS-CGHEVICLDNLS-TGRTANVEHLRDNKRFLLVEHDVR 80 Query: 61 DRECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEETRLWWSC 117 I +L I NFA+ + R +G + TN++G +LE R + Sbjct: 81 KPYDIDVSL-------IFNFASPASPPDYQRDPVGT---LLTNVLGAVNVLEVARRCGAT 130 Query: 118 LSQDKKDQFRFLQISTDEVYG-----SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + +Q ST EVYG + F P + Y K S++ L + Sbjct: 131 V----------VQSSTSEVYGDPHVNPQPESYFGNVNTIGPRACYDEGKRSAETLFFDYH 180 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 Y + + + N YGP P+ +++ I + ++G + +YGDG R + YV+D + Sbjct: 181 RCYDVDIKVGRIFNTYGPRMRPDDGRVVSNFIVQALKGDDITIYGDGSQTRSFCYVDDLI 240 Query: 231 RA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE--DR 287 L K N+G E + L D +I + S + +I D Sbjct: 241 DGFLRFSAKPKDCTGPINLGNPAE-------IPVRQLADIVIRMTGSRSRIIHLPAAIDD 293 Query: 288 PGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 P R D S+ + W P+ +E GL KT+ ++ Sbjct: 294 PQQRRP---DISRANELLRWQPRVPLEIGLEKTIVYF 327 >gi|241895195|ref|ZP_04782491.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] gi|241871501|gb|EER75252.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + L+ D + V+V+D L G+ S+ E F +VDI Sbjct: 1 MSVLVLGGAGYIGSHMVATLLADHR-DVVVVDNL-LTGHRASVPE-----GVPFYEVDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + ++ + +V+FAA S V S+ ++ N+ G LLE L Sbjct: 54 DKAALSEVFEKENIEQVVHFAASSIVPESVEKPLKYFDNNVYGMINLLE------VMLDF 107 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 D K Q F ST YG + E P NP +PY +K ++++ YG+ Sbjct: 108 DVK-QIVFS--STAATYGVAKENPIKETTPQNPINPYGESKLQMEHIMKWADQAYGLKWV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWL 224 V + + G H E L+P+ + T + + + ++G DG NVRD++ Sbjct: 165 ALRYFNVAGAKADGSIGEDHPTETHLVPIILQTALGQREKIMMFGDDYNTPDGFNVRDYV 224 Query: 225 YVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 +V D HV AL L KG ++N+G N GF + ++ + T Sbjct: 225 HVMDLADAHVLALDY-LAKGNESNQFNLGSAN-----------GFSVKQMVEAAREATGQ 272 Query: 281 IRFIE---DRPGHDRRYAIDSSKIKSEIGWFPQ 310 E R G S K + +GW P+ Sbjct: 273 PIPAEIGPRRAGDPDSLVASSDKAREILGWTPK 305 >gi|221061161|ref|XP_002262150.1| GDP-mannose 4,6-dehydratase [Plasmodium knowlesi strain H] gi|193811300|emb|CAQ42028.1| GDP-mannose 4,6-dehydratase, putative [Plasmodium knowlesi strain H] Length = 357 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 15/213 (7%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I + + +P I N AA+SHV S T +GT +LE ++ Sbjct: 56 DVLDSSNICKLINKIKPKEIYNLAAQSHVKVSFELPVYTAETTALGTLRILEAIKI---- 111 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F ST E+YG + + +E P+NP SPY+ K S Y+ + + +Y + Sbjct: 112 ---SNVPNVKFYNASTSELYGCCNDHVQNESTPFNPVSPYAIAKLYSHYITICYRKSYQM 168 Query: 178 PVLLSNCSNNYGPYHFPEKLIPLAITRMIEG-----SHVFLYGDGQNVRDWLYVEDHVRA 232 + N+ P E + IT+ + V + GD RDW + +D+VRA Sbjct: 169 FCVNGILFNHESPRR-GETFVTRKITKGVANICKNKQDVIVLGDLSTYRDWGHAKDYVRA 227 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF 265 +YL+L++ + + +NE+ + EI F Sbjct: 228 MYLMLQQDEANDF--VISSNEKHTVKEFCEISF 258 >gi|116119451|gb|ABJ80672.1| putative nucleotide sugar dehydratase [Campylobacter jejuni] Length = 155 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 9/161 (5%) Query: 89 SILGADEFITTNIIGTFILLEETRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSED 148 S ++ TN+ GT +LE + K + F+ ST EVYG+ E Sbjct: 1 SYTAPQSYVDTNVNGTLNMLEAAK---------KNEISHFIHTSTSEVYGTAFYIPIDEK 51 Query: 149 MPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEG 208 P P SPYSA+K ++D + L++ +++ + V ++ N YGP +IP IT+++ G Sbjct: 52 HPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSG 111 Query: 209 SHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRIGERYNIG 249 + GD RD +V D +L GE YNIG Sbjct: 112 AKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGEVYNIG 152 >gi|77404746|ref|YP_345319.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] gi|77390396|gb|ABA81578.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides 2.4.1] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 38/338 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI-----SQSNLFSFLQVD 58 ++TG G GS L +L+ +V I + N + I +++ D Sbjct: 6 LITGITGQDGSYLAEFLLEK-GYEVHGIKRRASMFNTQRIDHIYEDPHARNPRLKLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L + QPD + N A+SHV S + + +G LLE R L Sbjct: 65 LTDSSNLTRILAQIQPDEVYNLGAQSHVAVSFESPEYTADVDAVGALRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YGI Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYRESYGIY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I ++ + +G LY G+ ++RDW + D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRGLSHIAQGLEPCLYMGNIDSLRDWGHARDYVRMQW 238 Query: 235 LVLKKGR-------IGERYNIG----------GNNERKNIDIVFEIGFLLDA---LIPKS 274 ++L++ + G +Y++ G R V EIG + D + P+ Sbjct: 239 MMLQQEKPDDFVIATGLQYSVREFIKWSAAELGITLRFEGQGVEEIGVVEDVCGDMAPEV 298 Query: 275 YSHTELIRFIED--RPGHDRRYAIDSSKIKSEIGWFPQ 310 ++R RP D +K K ++GW P+ Sbjct: 299 TRGDVIVRIDPRYFRPAEVETLLGDPAKAKQKLGWVPE 336 >gi|293553960|ref|ZP_06674564.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] gi|291601886|gb|EFF32134.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] Length = 329 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 143/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS LV QV V+D L L K+ + F + DI Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQK-GYQVAVVDNL-----LTGHKQAVHPDAH-FYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ +RS ++ + +++FAA S V S+ + N+ G ILLE + + Sbjct: 54 DKVFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLE-------VMHE 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP-- 178 ++ F ST YG + +ED P NP +PY +K + ++ YG+ Sbjct: 107 FNVNKIVFS--STAATYGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYV 164 Query: 179 ------VLLSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 V + + G H PE L+P+ + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAKADASIGEDHTPETHLVPIILKVALGQRKALAVYGDDYDTPDGTCIRDYV 224 Query: 225 YVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 VED + A L LK+G +N+G + + + +L+A + + E+ Sbjct: 225 QVEDLIAAHILALEYLKEGNESNFFNLGSSKG-------YSVKEMLEAA--REVTGKEIP 275 Query: 282 RFIED-RPGHDRRYAIDSSKIKSEIGWFPQ 310 I R G R S K + +GW P+ Sbjct: 276 AEIAPRRAGDPSRLVASSEKAREILGWKPE 305 >gi|160914770|ref|ZP_02076984.1| hypothetical protein EUBDOL_00777 [Eubacterium dolichum DSM 3991] gi|158433310|gb|EDP11599.1| hypothetical protein EUBDOL_00777 [Eubacterium dolichum DSM 3991] Length = 333 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 143/347 (41%), Gaps = 61/347 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M+++VTGG GFIGS C L+ + V++ID L + + ++ ++ I+ + +F + D Sbjct: 1 MKILVTGGTGFIGSHTCVELI-EAGHDVVIIDNLYNSQSDVVDKIERITGTRP-AFYEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 CD E + + E DA ++FA V S+ + NI+ T L C Sbjct: 59 CCDEEALETIFNEHAIDAAIHFAGYKAVGESVQKPIMYYENNIMSTLAL---------CK 109 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSS-PYSATK---------------- 161 K + R + S+ VYG+ ED P P++ PY TK Sbjct: 110 VMAKHNCKRLVFSSSATVYGNPKSVPIFEDFPLGPTTNPYGTTKLLIEGILRDLHISDNE 169 Query: 162 ---ASSDYLVLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAI-TRMIEGSHVFLYG-- 215 A Y H G LL N+ P L+P + E ++ +YG Sbjct: 170 WNIALLRYFNPIGAHASG---LLGESPND-----IPNNLMPYIVKVANKELPYLHVYGND 221 Query: 216 ----DGQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLL 267 DG VRD+++V D HV A+ V++ + + YN+G +D+V + Sbjct: 222 YDTPDGTGVRDYIHVVDLAKGHVNAVNKVMEPIGV-DCYNLGTGIGYSVLDVVNTFAKVN 280 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 D +P + RPG + K E+GW ++N+E Sbjct: 281 DIEVP--------YQIDPRRPGDIATCYASTEKAFKELGWKAEKNLE 319 >gi|19705399|ref|NP_602894.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713390|gb|AAL94193.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 329 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 144/330 (43%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVVDSLI-TGHIDAVDEKAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 + D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 NNVDKIVFS--STAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRDWL 224 N G Y E LIPL + + + + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDAL-IPKSYSHTEL 280 +V D A YL L + R G + +N+ GN E ++ V E+ + IP S Sbjct: 225 HVMDLADAHYLALNRLRNGGDSQIFNL-GNGEGFSVKEVIEVTRKVTGYPIPAEVS---- 279 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 R G R S K E+ W P+ Sbjct: 280 ----PRRAGDPARLIASSKKAIDELKWKPK 305 >gi|257068108|ref|YP_003154363.1| UDP-galactose 4-epimerase [Brachybacterium faecium DSM 4810] gi|256558926|gb|ACU84773.1| UDP-galactose 4-epimerase [Brachybacterium faecium DSM 4810] Length = 332 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 56/346 (16%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M +V GGAG+IGS + R L+ K +V+V+D L+ L+ ++ L V + Sbjct: 1 MTTLVIGGAGYIGSHVVRLLLEQ-KQEVVVVDDLS-----TGLRRRTEGAELLELDVTLP 54 Query: 61 D-RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D RE + ++ D++++FAA V S+ + + NI G +L +C S Sbjct: 55 DAREKLAFQMRACGADSVIHFAAHKQVGESVANPEMYWHDNIGGLANVLA------ACAS 108 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPV 179 D +D + S+ VYG D L +E++ P +PY ATK ++++ +G+ Sbjct: 109 ADVRD---VVFSSSAAVYGVPDVDLVTEELTPQPINPYGATKYVGEWMLADAERAHGMRT 165 Query: 180 LLSNCSNNYGPYHFPE-------KLIPLAITRMIEGSHVFLYG------DGQNVRDWLYV 226 + N G +PE L+P+ + R+ G ++G DG +RD+++V Sbjct: 166 VALRYFNVAG-AGWPELADTAVMNLVPIVLDRLERGLAPVVFGDDYDTPDGTGIRDYVHV 224 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 D H+ AL + + R +N+G ++++ I + Sbjct: 225 LDLAHAHIAALDYLRGEERPHRTFNVGTGEGSSVLEVIDAIAR---------------AK 269 Query: 283 FIEDRPGHDRRYAIDSS-------KIKSEIGWFPQENMESGLNKTV 321 IE P H R A D + +I +GW + ++ + V Sbjct: 270 GIEITPEHGPRRAGDPARLICSGDRIAQTLGWKSEHGLDDIVRSAV 315 >gi|299135745|ref|ZP_07028929.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298601869|gb|EFI58023.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 331 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 35/336 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG AGFIGS L + LV + V ID + G +L I++ L VD+ + + Sbjct: 5 LITGIAGFIGSHLAQALV-ERGHHVRGIDNFS-TGRRENLAHIAEK--VDLLTVDLVNAD 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + A DAI++ A V RS+ +N+ GTF LLE R Sbjct: 61 AVARACVGV--DAILHQGALPSVPRSVKDPRPSHNSNLDGTFNLLEGARAAGIQ------ 112 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLSN 183 R + ++ YG+ E M P +PY K + + + ++ YG+ + Sbjct: 113 ---RVVYAASSSAYGNQPGFPRVETMAPQPIAPYPVQKLAGELYMQSYARVYGMETVCLR 169 Query: 184 CSNNYGPYHFPEK---------LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 N +GP P+ + + T + + GDG+ RD+ Y+ + V A Sbjct: 170 YFNIFGPRQTPDSPYSGVIAKFCLQMLKTGKTKDEQPTIQGDGEQGRDFTYIANAVSANL 229 Query: 235 LVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 L L+ G +N+ ER +++ ++I + + + + + E R G Sbjct: 230 LALEAPAEKIAGRVFNVA-CGERHSLNETYQI-------LARLTGYKKPAVYTEARAGDI 281 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 R D S + G+ P + E GL +TV WY + Sbjct: 282 RDSLADISAAREAFGYEPIVSFEEGLAQTVAWYREQ 317 >gi|284046957|ref|YP_003397297.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283951178|gb|ADB53922.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 315 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 36/326 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS LC L+ +V+ +D L G+L ++ I Q F L +DI + Sbjct: 5 LVTGGAGFLGSHLCDELLRRGH-RVICVDNLE-TGSLANIHHIRQPE-FVHLNLDIIEPY 61 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + D + + A+ + + + GT L KK Sbjct: 62 FVDEPV-----DFVYHLASPASPIDYLRLPLHTLKVGSHGTH----------HTLGLAKK 106 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + RFL ST EVYG + E P P Y K ++ L +A+ G+ Sbjct: 107 HRARFLIASTSEVYGDPQEHPQRESYWGHVNPIGPRGVYDEAKRYAEALTMAYHRQQGVD 166 Query: 179 VLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 + N YGP P + IP + + ++ + ++GDG R + +V D +R + + Sbjct: 167 TAIMRIFNTYGPRMRPHDGRAIPTFLRQALQDRPITVFGDGSQTRSFCFVSDLIRGMIAL 226 Query: 237 LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAI 296 + G NIG NE F + L A+I + S +E++ E P D + Sbjct: 227 AESG-FHNPVNIGNPNE-------FTLLELARAVIEVTGSRSEIV--FEALPTDDPQVRQ 276 Query: 297 DSSKIKSEI-GWFPQENMESGLNKTV 321 + E+ GW P+ + GL +T+ Sbjct: 277 PDIALAREVLGWEPEVALIEGLRRTI 302 >gi|221272678|emb|CAX18362.1| gmd [Yersinia pseudotuberculosis] Length = 374 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 16/249 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + ++TG G GS L +L+ + +V I + + N + + I Q +N FL Sbjct: 5 KALITGITGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHY 63 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD I N A+SHV S + + +GT LLE R+ Sbjct: 64 GDLTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI--- 120 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG Sbjct: 121 ---NGLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYG 177 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I A+ + G LY G+ ++RDW + +D+VR Sbjct: 178 MYACNGILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRM 237 Query: 233 LYLVLKKGR 241 +++L++ + Sbjct: 238 QWMMLQQDK 246 >gi|86355729|ref|YP_467621.1| dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CFN 42] gi|86279831|gb|ABC88894.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CFN 42] Length = 340 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 47/335 (14%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQ-VLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +V GGAGF+GS LC L+ L+ V+ +D + G +++ ++ F ++ D+ Sbjct: 26 LVNGGAGFLGSHLCERLL--LRGHSVICLDNFS-TGRRANVEHLTSHPHFRIIEHDVRQP 82 Query: 63 ECIRSALKEFQPDAIVNFAAESH---VDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 I ++L I NFA+ + R +G + TN++G L+ R + + Sbjct: 83 FDIEASL-------IFNFASPASPPDYQRDPVGT---LLTNVLGAVNTLDCARKTGAIV- 131 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGHT 174 +Q ST EVYG + E N P + Y K S++ L + T Sbjct: 132 ---------VQSSTSEVYGDPTQSPQRESYCGNVNSIGPRACYDEGKRSAETLFFDYHRT 182 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 YG+ + + N YGP + +++ I + + + + +YGDGQ R + YV+D V Sbjct: 183 YGVDIKVGRIFNTYGPRMRLDDGRVVSNFIVQALRNTDLTIYGDGQQTRSFCYVDDLVEG 242 Query: 233 LYLVLKKGRIGE-RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF--IEDRPG 289 G N+G E F + L + + + S + ++ + D P Sbjct: 243 FLRFSAAGSTCHGPINLGNPGE-------FTVRRLAEIIRDLTNSRSRIVHLPAVVDDP- 294 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ D S+ +E+GW PQ +E+GL +TV ++ Sbjct: 295 --RQRRPDISRAMTELGWQPQIELEAGLARTVEYF 327 >gi|83941629|ref|ZP_00954091.1| NAD-dependent epimerase/dehydratase [Sulfitobacter sp. EE-36] gi|83847449|gb|EAP85324.1| NAD-dependent epimerase/dehydratase [Sulfitobacter sp. EE-36] Length = 374 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 18/248 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 R ++TG G GS L L+ D +V I + + + N + I Q Sbjct: 4 RALITGITGQDGSYLAELLL-DKGYEVHGIKRRSSSLNTQRIDHIYQDPHEDDPDLILHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD + N A+SHV S + N G LLE R Sbjct: 63 GDLTDSSNLTRIMREVQPDEVYNLGAQSHVAVSFETPEYTTEVNANGALRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + +E+ P++P SPY+ K + ++ + + YG Sbjct: 120 -LGLEKKT--RFYQASTSELYGLVQETPQTEETPFHPRSPYAVAKMYAYWITVNYREAYG 176 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 I +L ++ S G F + I + + +G LY G+ +RDW + +D+VR Sbjct: 177 IYACNGILFNHESARRGET-FVTRKITRGLANIAQGLEGCLYMGNIDALRDWGHAKDYVR 235 Query: 232 ALYLVLKK 239 +++L++ Sbjct: 236 MQWMMLQQ 243 >gi|290996752|ref|XP_002680946.1| GDP-mannose 4,6 dehydratase [Naegleria gruberi] gi|284094568|gb|EFC48202.1| GDP-mannose 4,6 dehydratase [Naegleria gruberi] Length = 375 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 12/193 (6%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F L D+ D + S + + +PD I N A+SHV S + + IGT +LE Sbjct: 75 FKLLYGDLTDTGNLISIISKIRPDEIYNLGAQSHVKVSFEMPEYTANVDGIGTLRILEAI 134 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAW 171 R +C + K RF Q ST E+YG + + E P+ P SPY+ K S ++V+ + Sbjct: 135 R---ACGLEKKT---RFYQASTSELYGLVQEIPQKETTPFYPRSPYACAKLYSYWIVINY 188 Query: 172 GHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYV 226 Y + +L ++ S GP F + I +A+ R+ G LY G+ RDW + Sbjct: 189 REAYNMFALNGILFNHESIRRGP-TFVTRKITMAVARIHLGLQDCLYLGNLDAERDWGHA 247 Query: 227 EDHVRALYLVLKK 239 +D+V A++L+L++ Sbjct: 248 KDYVEAMWLMLQQ 260 >gi|302382261|ref|YP_003818084.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] gi|302192889|gb|ADL00461.1| NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264] Length = 140 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTG AGFIGSAL R L+ +V V DKLT A SL+ S SN +Q DICD Sbjct: 1 MVTGAAGFIGSALVRRLIRATSEEVPVFDKLTSASLPCSLEPASTSNPHGVVQADICDPV 60 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSI--------LG--ADEFITTNIIGTFILLEETRL 113 + +AL + +PD I + +A+SHV+RS LG I I T E+R Sbjct: 61 AVAAALADSRPDVITHLSAKSHVNRSTDATKIRDGLGWTPPATIEEGIQTTMRWYFESRG 120 Query: 114 WWSCL 118 WW + Sbjct: 121 WWQAM 125 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWRPL----YKELKP 340 + D++KI+ +GW P +E G+ T+ WY ++ WW+ + YK +P Sbjct: 86 STDATKIRDGLGWTPPATIEEGIQTTMRWYFESRGWWQAMLDGRYKTERP 135 >gi|145356172|ref|XP_001422311.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582552|gb|ABP00628.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 345 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/341 (23%), Positives = 153/341 (44%), Gaps = 36/341 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT----YAGNLNSLKEISQSNLFSFLQVDI 59 +VTG AGFIGS + R L N+ +++V+ +D + A N + ++++ + ++ D+ Sbjct: 5 LVTGAAGFIGSYVARAL-NERRVRVVGLDNINGYYPRALKRNRISKLAEVGVH-VVEADL 62 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D +R L + IV+ AA++ V ++ ++ +N+ G LLEE + S + Sbjct: 63 NDSLTLRGILDTCRVTTIVHLAAQAGVRYAVKNPGSYVHSNVAGFVSLLEEV-VKTSPIP 121 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 R + S+ VYG K FSE D+ +P+S Y+ATK +++ L + H +G+ Sbjct: 122 -------RVIFASSSSVYGLNTKLPFSESDVTDSPASLYAATKKANELLARTYNHIHGVA 174 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGS--HVFLYGDGQNV-RDWLYVEDHVRALYL 235 + YGP+ P+ + G ++F DG + RD+ Y++D VR + Sbjct: 175 LTALRFFTVYGPHGRPDMAYYSFANNIRAGQLVNIFRSADGSELARDFTYIDDIVRGIIA 234 Query: 236 VLKKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 + YN+G + D V ++ L + ++Y Sbjct: 235 ACDTSEASGKKADGSNPPFRVYNLGNTHPVTVSDFVSKLEHALGMVAKRNY-------LP 287 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + G + S + ++ + P+ ++++GL WYL Sbjct: 288 MPKTGDVPYTHANISAAERDLSYKPRVDLDTGLQYFAEWYL 328 >gi|320104567|ref|YP_004180158.1| GDP-mannose 4,6-dehydratase [Isosphaera pallida ATCC 43644] gi|319751849|gb|ADV63609.1| GDP-mannose 4,6-dehydratase [Isosphaera pallida ATCC 43644] Length = 342 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 34/324 (10%) Query: 4 IVTGGAGFIGSALCRYLV----NDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFL 55 ++TG G GS L L+ +D + LV + + + N N + ++ F Sbjct: 5 LITGITGQDGSYLAELLLQRPEHDYVVHGLV--RRSSSINRNRIDHLTADPALKERFKLH 62 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D + + E QPD + N A+SHV S + +GT LLE R Sbjct: 63 YADLSDASSLTRLIHEIQPDEVYNLGAQSHVRVSFDQPIYTVDVVAVGTLRLLEAVR--- 119 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 L +F Q S+ E+YGS P++P SPY+ K + Y + + Y Sbjct: 120 -ELHAQGIKPVKFYQASSSEMYGSAPPPQ-GPHTPFHPRSPYACAKLYAHYQTINYREAY 177 Query: 176 GIPVLLSNCSNNYGPY---HFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVR 231 G+ N+ P +F + I L R+ EG G+ + RDW + D+ R Sbjct: 178 GMFACSGILFNHESPRRGENFVTRKITLGAARIKEGLQRKLALGNLEAKRDWGFAGDYAR 237 Query: 232 ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD 291 A++++L+ R R + E ++ ++ F + L P F+E P H Sbjct: 238 AMWMMLQ--RDTPRDFVVATGETHSVREFLDLTFGMLGLDPDD--------FVEFDPRHT 287 Query: 292 RRYAI-----DSSKIKSEIGWFPQ 310 R + D S+ + +GW P+ Sbjct: 288 RPSEVDVLQGDPSEAREILGWTPK 311 >gi|237723789|ref|ZP_04554270.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D4] gi|255014979|ref|ZP_05287105.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_7] gi|229437804|gb|EEO47881.1| GDP-mannose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] Length = 362 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 25/324 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ D V I + + + + F D+ D Sbjct: 5 LITGITGQDGSFLAEFLL-DKGYDVHGIIRRSSVDYRERIAHLEGKPHFHLHYADMGDSM 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + QP I N AA+SHV S + + +G +LE R + + Sbjct: 64 SLVKLVGKVQPTEIYNLAAQSHVQVSFDAPEFTADVDAVGVLRILEAVR------TNHLE 117 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 + Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + + Sbjct: 118 KTCKIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKLYGYWIVKEYREAYNMFCCSGI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V ++L+L+ Sbjct: 178 LFNHESERRGET-FVTRKITLATARIAQGKQDCLYLGNLDSLRDWGYAKDYVECMWLILQ 236 Query: 239 KGRIGERYNIGG--NNERKNIDIVFEI--------GFLLDALIPKSYSHTELIRFIED-- 286 + + + G + R+ + F G +D + + L+ ED Sbjct: 237 QDKPQDFVIATGVQHTVREFATLAFHYAGIELRWEGEGIDEKGIDAKTGKVLVAVSEDFY 296 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D +K K+E+GW PQ Sbjct: 297 RPTDVVNLWGDPTKAKNELGWNPQ 320 >gi|87123116|ref|ZP_01078967.1| GDP-D-mannose 4, 6-dehydratase [Synechococcus sp. RS9917] gi|86168836|gb|EAQ70092.1| GDP-D-mannose 4, 6-dehydratase [Synechococcus sp. RS9917] Length = 356 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 22/250 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--------FSFL 55 +VTG G GS YLV L + ++ + +L++ I +L F Sbjct: 5 LVTGVTGQDGS----YLVELLLSKGYIVHGIKRRSSLSNTSRIDSLSLDSGIYKKRFDLH 60 Query: 56 QVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 D+ D I + + + +PD I N A+SHV S + +N +GT +LE R Sbjct: 61 YADLTDSASIINVIAKTEPDEIYNLGAQSHVAVSFNQPEYTADSNALGTLRILEAVR--- 117 Query: 116 SCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 + + + R Q ST E++G + + E P+ P SPY+ K + ++ + + +Y Sbjct: 118 ---ALNMSSKVRIYQASTSELFGKVQEVPQRETTPFYPRSPYAVAKLYAYWITINYRESY 174 Query: 176 GIPVLLSNCSNNYGP---YHFPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVR 231 GI N+ P +F + I L ++R+ E H + G+ ++RDW + +D+V Sbjct: 175 GIYACNGILFNHESPRRGLNFVTRKITLTLSRINEFGHGCLMLGNLDSLRDWGHAKDYVE 234 Query: 232 ALYLVLKKGR 241 +L+L++ + Sbjct: 235 MQWLMLQQDK 244 >gi|85712142|ref|ZP_01043194.1| probable lipopolysaccharide biosynthetic protein (WbpP) [Idiomarina baltica OS145] gi|85693950|gb|EAQ31896.1| probable lipopolysaccharide biosynthetic protein (WbpP) [Idiomarina baltica OS145] Length = 345 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 29/337 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEI---SQSNLFSFLQVD 58 +VTG AGFIGS L L+ L +V+ +D + + NL+ ++ + Q F F++ D Sbjct: 19 LVTGVAGFIGSNLLETLLK-LNQKVVGLDNFSTGFQHNLDEVQSLVTEEQWANFEFVEGD 77 Query: 59 ICDRECIRSAL---KEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWW 115 ICD E RS + K + + +++ AA V RSI +NI G +L Sbjct: 78 ICDLETCRSVMTTDKGQKINYVLHQAALGSVPRSINDPITSNKSNIDGFLNML------- 130 Query: 116 SCLSQDKK-DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 ++D + D F + S+ YG E+ NP SPY+ TK ++ + Sbjct: 131 -VAAKDAEVDSFTYAASSS--TYGDHPALPKVEENIGNPLSPYAVTKYVNELYASVFAKV 187 Query: 175 YGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 YG + N +GP P+ +IP MI+ V + GDG+ RD+ YVE+ + Sbjct: 188 YGFKTIGLRYFNVFGPRQNPDGAYAAVIPKWTAAMIKNEEVSINGDGETSRDFSYVENAI 247 Query: 231 R--ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + L E YN+ +R ++ +F L +YS L F R Sbjct: 248 QLNVLAATSDDSVKDEIYNMAL-GDRTTLNQLFRSIKLSLEKYGIAYSREPL--FENFRR 304 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 G + + K K + + PQ ++ G+ KT WY+ Sbjct: 305 GDVKHSQAEIQKSKQMLSYEPQVRVDRGIEKTSLWYI 341 >gi|254409739|ref|ZP_05023520.1| UDP-glucose 4-epimerase [Microcoleus chthonoplastes PCC 7420] gi|196183736|gb|EDX78719.1| UDP-glucose 4-epimerase [Microcoleus chthonoplastes PCC 7420] Length = 332 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 49/328 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAG+IGS L V+V+D L G+ ++EI ++ L + D+ DR Sbjct: 8 ILVTGGAGYIGSHTVLAL-QRAGYNVVVLDNLV-CGHREFVEEILKAKL---VIGDVGDR 62 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + A+++FAA V S++ ++ N+ GT LLE + ++ D Sbjct: 63 TLLDQIFASHNIAAVLHFAAYIAVGESVIYPAKYYRNNVSGTLTLLE------AMVAADV 116 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 K + ST VYG + +E P NP +PY+ +K + ++ + H Y + ++ Sbjct: 117 KT---LVFPSTCAVYGMPQEVPMTEVHPQNPINPYATSKWMMERMLADFDHAYQLRFIVF 173 Query: 182 -------SNCSNNYGPYHFPE-KLIPLAI-TRMIEGSHVFLYG------DGQNVRDWLYV 226 +N G H+PE LIPL + T + + + ++G DG +RD+++V Sbjct: 174 RFFNAAGANPEGLLGEDHYPETHLIPLVLWTVLGKRDSIAIWGTDYSTPDGTCLRDYIHV 233 Query: 227 ED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL-I 281 D H+ L +L+ G+ E +N+G N GF + +I + T+ I Sbjct: 234 SDLADAHILGLEYLLQGGK-SEIFNLGSGN-----------GFSVRQVIDTAKQVTQKEI 281 Query: 282 RFIE--DRPGHDRRYAIDSSKIKSEIGW 307 + IE RPG S K + +GW Sbjct: 282 KIIECDRRPGDAPILVGSSDKARKILGW 309 >gi|86137092|ref|ZP_01055670.1| CDP-glucose-4,6-dehydratase [Roseobacter sp. MED193] gi|85826416|gb|EAQ46613.1| CDP-glucose-4,6-dehydratase [Roseobacter sp. MED193] Length = 348 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 30/335 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+ +TG GF GS + +L + + QV L L ++ +N S DI Sbjct: 9 RVFLTGHTGFKGSWMALWL-SQMGAQVTGY-ALPPDTELALFDQLDIANRISSQFGDINS 66 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 E + SAL E +PD + + AA+S V R TN++GT L E R+ Sbjct: 67 YEALLSALDEAKPDFVFHLAAQSLVLRGYSDTLTTWQTNVMGTANLFEALRVL------- 119 Query: 122 KKDQFRFLQISTDEVYGSLDKG-LFSEDMPYNPSSPYSATKASSDYLVLAW-----GHTY 175 K + ++TD+VY + + F ED P PYSA+KA ++ +V ++ Sbjct: 120 -KRPATVVAVTTDKVYRNTEAHHAFVEDDPLGGIDPYSASKAGTELVVNSYRSVLLQEKL 178 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED----HVR 231 I V + N G + E + I R + + L + Q VR W +V + +++ Sbjct: 179 PIRVASARAGNVIGGGDWCENRLVPDIARALIANEPLLTRNPQAVRPWQHVLEPLAGYMQ 238 Query: 232 ALYLVLKKGRIGERYNIGGN--NERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 L+ + + YN G + + R D++ E L + P +Y+ T+ D P Sbjct: 239 LAELLHGDPQFADAYNFGPDITDNRTVQDVIVES---LKSW-PGTYAPTD----NSDMPH 290 Query: 290 HDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ K K+++GW P+ N E+ + KT+ WY Sbjct: 291 EANLLMLNIEKAKAKLGWAPRWNFETAVAKTMQWY 325 >gi|108803416|ref|YP_643353.1| GDP-mannose 4,6-dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108764659|gb|ABG03541.1| GDP-mannose 4,6-dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 334 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 28/316 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS--LKEISQSNLFSFLQVDICD 61 ++TG G G+ L + L L+ V+ A +N+ L + + + D+ D Sbjct: 6 LITGITGQDGAYLAQLL---LEKGYRVVGAFRRASMVNTARLDALGIAEHVELVPFDLTD 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII---GTFILLEETRLWWSCL 118 +R ++ PD + N AA+S V S ++ +TT I G LLE R Sbjct: 63 HGNMRRVIEAVAPDEVYNLAAQSFVGVSF---EQPVTTGEITGVGVVRLLEAIR------ 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + RF Q ST E++G + +E P++P SPY+A+K + + + + YG+ Sbjct: 114 --EVNPEIRFYQASTSEMFGKARETPQNETTPFHPRSPYAASKLYAHWTAVNYREAYGMH 171 Query: 179 VLLSNCSNNYGP---YHFPEKLIPLAITRMIEG-SHVFLYGDGQNVRDWLYVEDHVRALY 234 N+ P F + I L R+ G G+ + RDW Y +++V A++ Sbjct: 172 ASSGILFNHESPLRGVEFVTRKISLGAARIKYGLQEKLTLGNLEARRDWGYAKEYVEAMW 231 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 L+L++ E Y + E ++ E F + L + Y T+ F+ RP Sbjct: 232 LMLQQPE-AEDYVV-ATGESHSVREFVETAFEVAGLDWERYVVTDPA-FL--RPAEVDFL 286 Query: 295 AIDSSKIKSEIGWFPQ 310 D SK KS++GW P+ Sbjct: 287 LGDPSKAKSKLGWEPR 302 >gi|70951549|ref|XP_745006.1| GDP-mannose 4,6-dehydratase [Plasmodium chabaudi chabaudi] gi|56525186|emb|CAH80195.1| GDP-mannose 4,6-dehydratase, putative [Plasmodium chabaudi chabaudi] Length = 361 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 12/187 (6%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D I S + + +P+ I N AA+SHV S + IGT +LE +L Sbjct: 57 DLLDNSNIFSLISKIKPNEIYNLAAQSHVKVSFELPEYTAQCTAIGTLRILEAIKL---- 112 Query: 118 LSQDKKDQFRFLQISTDEVYG-SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 K D +F ST E+YG ++ +E+ P+NP SPY K S Y+ + Y Sbjct: 113 ---SKIDNIKFYNASTSELYGNTIQTECQNENTPFNPVSPYGIAKLYSHYITKNYREAYN 169 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSH-VFLYGDGQNVRDWLYVEDHVRA 232 + + N+ P F K I I ++ + H V + G+ RDW + +D+V A Sbjct: 170 MFCVNGILFNHESPRRGETFVTKKITKGIAKIFKKIHTVIILGNIDTFRDWGHAKDYVYA 229 Query: 233 LYLVLKK 239 +YL+L++ Sbjct: 230 IYLMLQQ 236 >gi|313126446|ref|YP_004036716.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] gi|312292811|gb|ADQ67271.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] Length = 313 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/338 (26%), Positives = 143/338 (42%), Gaps = 46/338 (13%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 +VTGGAGF+GS L L+ND QV V+D +G +L+ VD E Sbjct: 7 VVTGGAGFLGSHLVDSLLND-GYQVTVLDNFG-SGRPENLE-----------HVDAERFE 53 Query: 64 CIRSALKEFQPD-----AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I + E P + +FA+ + A E N +GT + L Sbjct: 54 TINHDVSEPFPSLNNVGVVYHFASRASPKDFDSHAVEIALANGMGT----------HNAL 103 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-----PSSPYSATKASSDYLVLAWGH 173 + + R + ST EVYG ++ E+ N P +PY +K ++ L +A+ Sbjct: 104 QFASEHEARVVLASTSEVYGDPEEHPQHEEYRGNVNVRGPRAPYDESKRFAEALAVAYEA 163 Query: 174 TYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED--- 228 + + + N YGP + ++IP +T+ +EG + +YGDG R + YV D Sbjct: 164 QHSLDIRTVRIFNTYGPRMRQDDGRVIPNFLTQALEGKDLTVYGDGSQTRSFCYVSDLIA 223 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 +RA + GE N+G +E +FE+ L+ ++ + S ED P Sbjct: 224 GIRAFADAPSEVAKGEVVNVGNTDEV----TIFELAELILEIV-DTDSDITYEPLPEDDP 278 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 R D SK + W P +E GL +T+ + D Sbjct: 279 KIRRP---DISKATGMLDWEPTIGLEKGLKRTIEAFDD 313 >gi|288941682|ref|YP_003443922.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] gi|288897054|gb|ADC62890.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] Length = 319 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 143/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV + +V+ +D Y +++ ++ F ++ DI Sbjct: 7 RVLVTGGAGFLGSRLCARLVAE-DCEVICVDNF-YTATKDNVSQLLGHPHFELMRHDI-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 63 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVHGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG + SE P P + Y K ++ L + + Sbjct: 108 KRTKARILQASTSEVYGDPECHPQSETYWGRVNPIGPRACYDEGKRCAETLFFDYHRQHR 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP P +++ I + ++G + LYGDG R + +V+D + + Sbjct: 168 LEIKVARIFNTYGPGMHPNDGRVVSNFIVQALKGEPITLYGDGSQTRSFCFVDDMIEGFV 227 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ I N+G I + L + + + S +EL+ +D P Sbjct: 228 RLMASPAEITGPINLGN-------PIELSMRQLAERIRELTGSRSELVYRPLPQDDPTQR 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ + +GW P+ ++ GL +T+ ++ Sbjct: 281 QP---DITRARELLGWEPRVPLDDGLKQTIFYF 310 >gi|260817164|ref|XP_002603457.1| hypothetical protein BRAFLDRAFT_222572 [Branchiostoma floridae] gi|229288776|gb|EEN59468.1| hypothetical protein BRAFLDRAFT_222572 [Branchiostoma floridae] Length = 337 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 36/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ D +V+V+D N I N F L D+ + Sbjct: 15 RILVTGGAGFVGSHLVDRLMMDGH-EVVVMDNFFTGRKRNVEHWIGHEN-FELLNHDVVE 72 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + I TN IGT + L Sbjct: 73 PLYI-------EVDQIYHLASPASPPHYMYNPIKTIKTNTIGTL----------NMLGLA 115 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ RFL ST EVYG + +E+ P P + Y K ++ + A+ Sbjct: 116 KRVNGRFLLASTSEVYGDPEVHPQNEEYWGHVNPIGPRACYDEGKRVAETMSYAYAKQEH 175 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N +GP H + +++ I + ++ + ++G G+ R + YV D V L Sbjct: 176 VQVRVARIFNTFGPRMHMSDGRVVSNFILQSLQDQPITVFGAGKQTRSFQYVSDLVNGLV 235 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 +++ I N+G E + E ++ L+ S ++ ED P +R Sbjct: 236 MLMNSN-ISTPVNLGNPEEHS----ILEFATIIKNLV-GCKSDIVHVKEQEDDP---QRR 286 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D +K +GW P+ M GLN+T+ ++ Sbjct: 287 KPDITKAMG-MGWQPKVPMIEGLNRTIEYF 315 >gi|196230014|ref|ZP_03128877.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] gi|196225611|gb|EDY20118.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] Length = 323 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 45/327 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKEISQSNLFSFLQVD 58 M++ VTGGAG+IGS +C + + QV V D LT + ++S E+ +L Sbjct: 1 MKIFVTGGAGYIGS-ICVEQLLEAGHQVTVFDNLTEGHRKAVDSRAELIIGDL------- 52 Query: 59 ICDREC-IRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 +EC I A++ +PDA+++FAA + V S+ ++ N+ G LL+ + Sbjct: 53 --QKECDIHDAMEHARPDAVMHFAANALVGESMENPSKYFRNNVYGGLNLLD------AM 104 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 ++ K +F+ ST +G D+ E +P P +PY +K + ++ + +G+ Sbjct: 105 VAVGVK---KFVFSSTCATFGPPDRLPIDETLPQRPINPYGESKLMFEKILRWYDEIHGL 161 Query: 178 PVL------LSNCSNNYGPYHFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 + + + +G H E LIP + + + +V ++G DG +RD+ Sbjct: 162 KFVALRYFNAAGATERFGEDHRIETHLIPNVLKVALGQRENVQIFGTDYETPDGTCIRDY 221 Query: 224 LYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRF 283 +++ D +A L L + YN+G V EI + + K E R Sbjct: 222 IHIVDLAQAHMLALGT-KESAFYNLGTGGGTS----VREIIATCEKVTGKKIPVVEKAR- 275 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG R S K++ E+GW P+ Sbjct: 276 ---RPGDPARLIAGSDKVQRELGWKPK 299 >gi|195375267|ref|XP_002046423.1| GJ12512 [Drosophila virilis] gi|194153581|gb|EDW68765.1| GJ12512 [Drosophila virilis] Length = 447 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGGAGF+GS L YL+ +++V+D N + N F + DI + Sbjct: 118 RILITGGAGFVGSHLVDYLMIQGH-EIIVVDNFFTGRKRNVEHWLGHEN-FELIHHDIVN 175 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 I + D I + A+ + + + I TN +GT + L Sbjct: 176 PLFI-------EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTI----------NVLGLA 218 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + L ST EVYG E P P + Y K S+ L A+ Sbjct: 219 KRVMAKVLIASTSEVYGDPQVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEK 278 Query: 177 IPVLLSNCSNNYGP-YHFPE-KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + V ++ N YGP H + +++ I + + + +YG+G+ R + YV D V + Sbjct: 279 VQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGM- 337 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G E+ + E ++ L+ S + I+ +ED P +R Sbjct: 338 IALMASNYTQPVNLGNPVEQ----TIGEFANIIKHLV-GGQSEVKQIKAMEDDP---QRR 389 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D ++ K + W P+ +E+GL +T+ ++ Sbjct: 390 KPDITRAKQRLNWEPKVPLETGLLQTISYF 419 >gi|189466109|ref|ZP_03014894.1| hypothetical protein BACINT_02479 [Bacteroides intestinalis DSM 17393] gi|189434373|gb|EDV03358.1| hypothetical protein BACINT_02479 [Bacteroides intestinalis DSM 17393] Length = 359 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 22/251 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSL---------KEISQSNLF 52 + ++TG G GS L +L+ D +V + + + + N + +++ + L Sbjct: 4 KALITGITGQDGSFLAEFLI-DKGYEVHGVLRRSSSFNTGRIEHLYLDEWVRDMKKDRLI 62 Query: 53 SFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + D+ D + +++ QPD I N AA+SHV S + + IGT +LE R Sbjct: 63 NLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAIGTLRMLEAVR 122 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 + L +KK R Q ST E++G + + E P+ P SPY K ++ + Sbjct: 123 I----LGLEKKT--RIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYR 176 Query: 173 HTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVE 227 +Y + +L ++ S G F + I LA R+ +G LY G+ RDW Y + Sbjct: 177 ESYDMFAVNGILFNHESERRGE-TFVTRKISLAAARIAQGFQDKLYLGNLDACRDWGYAK 235 Query: 228 DHVRALYLVLK 238 D+V ++L+L+ Sbjct: 236 DYVECMWLILQ 246 >gi|149204685|ref|ZP_01881650.1| GDP-mannose 4,6-dehydratase [Roseovarius sp. TM1035] gi|149141944|gb|EDM29994.1| GDP-mannose 4,6-dehydratase [Roseovarius sp. TM1035] Length = 372 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L +L+ +V I + N + I Q F Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASLFNTQRVDHIYQDPHGGRQNFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E QPD + N A+SHV S + + IGT LLE R Sbjct: 62 GDLTDSSNLTRILSEVQPDEVYNLGAQSHVAVSFEAPEYTADVDAIGTLRLLEAIRFL-- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 +++ RF Q ST E+YG + + E P++P SPY+ K + ++ + + YG Sbjct: 120 ----GLENKTRFYQASTSELYGLVQEIPQRETTPFHPRSPYAVAKMYAYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ ++RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEDCLYMGNIDSLRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|297250801|ref|ZP_06865081.2| UDP-glucose 4-epimerase [Neisseria polysaccharea ATCC 43768] gi|296837945|gb|EFH21883.1| UDP-glucose 4-epimerase [Neisseria polysaccharea ATCC 43768] Length = 355 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 65/362 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M +++TGG GFIGS LV +++D L + A L L++I+ N+ F Q D Sbjct: 18 MTVLITGGTGFIGSHTAVSLVQS-GYDAVILDNLCNSSAAVLPRLQQITGRNI-PFYQGD 75 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I DR+ +R E + +++++FA V S+ ++ N+ G+ +L EE Sbjct: 76 IRDRQILRQIFSEHEIESVIHFAGLKAVGESVAEPIKYYGNNVYGSLVLAEE-------- 127 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDM-PYNPSSPYSATKASSDYLVL-------A 170 + F+ + S+ VYG +K ++EDM P + ++PY A+KA + ++ Sbjct: 128 -MARAGVFKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPR 186 Query: 171 WGHTYGIPVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEG--SHVFLYG--- 215 W V+L N G P P L+P I ++ G + ++G Sbjct: 187 WS------VILLRYFNPIGAHESGLIGEQPNGIPNNLLPY-ICQVASGRLPQLSVFGGDY 239 Query: 216 ---DGQNVRDWLYVEDHVRALYLVLK-KGRIG--ERYNIGGNNERKNIDIVFEIGFLLDA 269 DG +RD+++V D +K KG + +N+G + ++I+ Sbjct: 240 PTPDGTGMRDYIHVMDLAEGHIAAMKAKGDVAGVHLFNLGSGHAYSVLEIIRAFEAASGL 299 Query: 270 LIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 IP R R G D S K E GW + +++ ++++W Sbjct: 300 RIP--------YRIQPRRAGDLACSFADPSHTKQETGWETK--------RSLAQMMEDSW 343 Query: 330 WW 331 W Sbjct: 344 RW 345 >gi|114762149|ref|ZP_01441617.1| udp-glucuronic acid epimerase protein [Pelagibaca bermudensis HTCC2601] gi|114545173|gb|EAU48176.1| udp-glucuronic acid epimerase protein [Roseovarius sp. HTCC2601] Length = 338 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 44/344 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLKE--ISQSNLFSFLQVDI 59 +VTG AGFIG L + L+N+ +V+ D ++ Y L + + + F + Sbjct: 8 LVTGSAGFIGFHLSKRLLNE-GYRVIGFDAMSDYYDVVLKQRRHAILGEHAAFEPVIAHT 66 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +P+ IV+ AA++ V S+ ++ +N++G LLE R Sbjct: 67 EDEGRLTELCVSERPEIIVHLAAQAGVRYSLEAPRSYVQSNLVGALELLEAAR------- 119 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSP-------YSATKASSDYLVLAWG 172 L ST VYG+ + +MPY ++ Y+ATK +++ + ++ Sbjct: 120 --AAPPKHLLMASTSSVYGA------NTEMPYRETAKADHQMSFYAATKKANEAMAHSYA 171 Query: 173 HTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 H YG+P+ + YGP+ P+ + + ++EG + +Y G RD+ Y++D + Sbjct: 172 HLYGLPITMFRFFTVYGPWGRPDMALFKFVKAILEGRPIDIYNHGDMRRDFTYIDDLIEG 231 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDI-----VFEIGF-----LLD--ALIPKSYSHTEL 280 L + IG+ +G E ++ V +G L D I ++ L Sbjct: 232 LVRL-----IGQPPVLGAPIEGDSLSPVAPWRVLNVGHGTPERLEDFVTAIEQALGTPAL 286 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +++ +PG D++ + G P+ + G+ V WY Sbjct: 287 RNYMDMQPGDVPATWADNALLTRLTGTLPRTPLADGVAAFVDWY 330 >gi|312973699|ref|ZP_07787871.1| GDP-mannose 4,6-dehydratase [Escherichia coli 1827-70] gi|310332294|gb|EFP99529.1| GDP-mannose 4,6-dehydratase [Escherichia coli 1827-70] Length = 373 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 16/247 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SN-LFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q SN F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTSNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LTDSSNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKKGR 241 ++L++ + Sbjct: 239 MMLQQDK 245 >gi|255261296|ref|ZP_05340638.1| GDP-mannose 4,6-dehydratase [Thalassiobium sp. R2A62] gi|255103631|gb|EET46305.1| GDP-mannose 4,6-dehydratase [Thalassiobium sp. R2A62] Length = 399 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 16/249 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ-----SNLFSFLQ 56 + I+TG G GS L L+ +V I + + N + + I + ++ F Sbjct: 30 KAIITGITGQDGSYLAELLLEK-GYEVHGIKRRASSFNTSRIDHIYEDPHNDNSSFHLHY 88 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + + E QPD I N A+SHV S + + +GT LLE R Sbjct: 89 GDLTDSSNLTRIISEVQPDEIYNLGAQSHVAVSFEAPEYTADVDAMGTLRLLEAVRF--- 145 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L DKK RF Q ST E+YG + + +E P++P SPY+ K + ++ + + Y Sbjct: 146 -LGLDKKT--RFYQASTSELYGLVQETPQTETTPFHPRSPYAVAKMYAYWICVNYREAYD 202 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 + N+ P F + I + + G LY G+ ++RDW + +D+VR Sbjct: 203 MFACNGILFNHESPRRGETFVTRKITRGLANIAMGLEDCLYMGNIDSLRDWGHAKDYVRM 262 Query: 233 LYLVLKKGR 241 +++L++ R Sbjct: 263 QWMMLQQDR 271 >gi|255036759|ref|YP_003087380.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] gi|254949515|gb|ACT94215.1| NAD-dependent epimerase/dehydratase [Dyadobacter fermentans DSM 18053] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TG AGF+GS LC + + + V+ +D L G++ +++ + F F D+ Sbjct: 3 RVLITGAAGFLGSHLCERFLKE-GMYVIGMDNLI-TGDMRNIEHLMPDPNFEFNHHDVTK 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + L D I++FA+ + + + + +GT LL L++ Sbjct: 61 YVHVPGEL-----DYIMHFASPASPIDYLKIPIQTLKVGAMGTHNLL--------GLARA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 KK RF+ ST EVYG +ED P P Y K + + +A+ +G Sbjct: 108 KKS--RFIIASTSEVYGDPLVHPQTEDYWGHVNPIGPRGCYDEAKRYQEAITMAYHRYHG 165 Query: 177 IPVLLSNCSNNYGPYHF--PEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + N YGP +++P + + + G + ++GDG R + YV+D V +Y Sbjct: 166 LETRIVRIFNTYGPRMRLNDGRVLPAFMGQALRGEDITVFGDGSQTRSFCYVDDLVEGIY 225 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHDR 292 +L NIG E IG + +I + + +++ +D P + Sbjct: 226 RLLMSD-YSLPVNIGNPKE-------ITIGQFAEEIIKLTGTDQKVVYKPLPQDDP---K 274 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D SK K +GW P+ + E GL T ++ Sbjct: 275 QRQPDISKAKEILGWEPKVSREEGLRITYDYF 306 >gi|157694215|ref|YP_001488677.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] gi|157682973|gb|ABV64117.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 45/330 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L+ + +V+V+D L G+ ++ E + + D+ Sbjct: 1 MTILVCGGAGYIGSHAVAALLAKGE-RVVVVDNLQ-TGHKEAVLEGA-----VLEKGDLR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D +R K Q +A+++FAA+S V S+ ++ N+ G LL+ Sbjct: 54 DHAFLRQVFKTHQIEAVMHFAADSLVGESVTDPLKYYDNNVGGATALLQ---------VM 104 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG-HTYGIPV 179 ++ D + ST YG + E NP++PY TK + + + L W YGI Sbjct: 105 NEFDVKHIVFSSTAAAYGEPKRVPIVETDETNPTNPYGETKLAIEKM-LKWSEEAYGIEY 163 Query: 180 LLSNCSNNYGPY--------HFPE-KLIPLAITRMI-EGSHVFLYG------DGQNVRDW 223 ++ N G + H PE LIP+ + + + + +YG DG +RD+ Sbjct: 164 VVLRYFNVAGAHTEGLVGEDHQPETHLIPIILQVALGKRDQIMIYGDDYETEDGTCIRDY 223 Query: 224 LYVEDHVRALYLVLKKGRIGE---RYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTEL 280 ++V D V A L + + R G+ YN+G F + +++A + K H Sbjct: 224 IHVMDLVEAHILAVDRLRAGKGSATYNLGNGTG-------FSVKQVVEA-VRKVTGHAIP 275 Query: 281 IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 + + R G + S K E+GW PQ Sbjct: 276 AQVAKRRAGDPAKLIASSEKALQELGWTPQ 305 >gi|16124347|ref|NP_418911.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|221233029|ref|YP_002515465.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] gi|13421195|gb|AAK22079.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|220962201|gb|ACL93557.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] Length = 327 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 87/343 (25%), Positives = 144/343 (41%), Gaps = 48/343 (13%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DICD 61 ++VTGGAG++GS C L + + +V D L+ N +E Q + L+V DI D Sbjct: 4 VLVTGGAGYVGSHCCLALA-EAGFRPVVFDDLS-----NGHREHVQ---WGPLEVGDIRD 54 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + + P A+++FAA V S+ F TN+ GT L+E R Sbjct: 55 AARLDAVFAAYAPVAVLHFAARIEVGESVKNPGAFFDTNVGGTITLIEAAR--------- 105 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 + + ST +G E P P +PY +K + + + G+ + Sbjct: 106 RAGVKVVVFSSTCATFGDPVDLPMKETHPQAPLNPYGRSKLMVEQALADYDRYVGLKSAV 165 Query: 182 --------SNCSNNYGPYHFPEK-LIPLAITRMIEGSHVF-LYG------DGQNVRDWLY 225 ++ G +H PE +PLAI + F ++G DG VRD+++ Sbjct: 166 MRYFNAAGADPQGRIGEWHEPETHAVPLAIQVALGQRPRFTIFGDDYDTRDGTAVRDYVH 225 Query: 226 VED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 V D HV AL +L G E YN+G ++V +G + A +P + Sbjct: 226 VLDLADAHVAALKRLLVGGS-SETYNLGTGTGTTVRELVDGVGKVAGAPLP--------V 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 RPG D +K ++E+GW +++ L+ W+ Sbjct: 277 EIASRRPGDAPVLVGDHAKARAELGWKASRSLDEILSTAWRWH 319 >gi|465550|sp|Q04871|YCL2_ECO11 RecName: Full=Uncharacterized 37.6 kDa protein in cld 5'region; AltName: Full=ORF2 gi|41111|emb|CAA78940.1| hypothetical protein [Escherichia coli] Length = 334 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 40/348 (11%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLT--YAGNLNSLK-EISQSNLFSFLQV 57 M+ +VTG AGFIG + + L+ + QV+ ID L Y +L + E+ F F ++ Sbjct: 1 MKYLVTGAAGFIGFHVSKRLL-EAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKI 59 Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ DRE + + + V S+ + +N+ G +LE R Sbjct: 60 DLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCR----- 114 Query: 118 LSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTYG 176 K Q L S+ VYG K FS D + P S Y+ATK +++ + + H YG Sbjct: 115 ---HNKIQ-HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYG 170 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLV 236 +P YGP+ P+ + M+EG + +Y G+ RD+ Y++D A+ + Sbjct: 171 LPATGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIAEAIIRL 230 Query: 237 ------------LKKGRIGER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 ++ G YNIG ++ ++++ I L DAL ++ + Sbjct: 231 QDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSP---VELMDYIQALEDALGIEAKKN- 286 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 + +PG + D+ + IG+ P+ ++ G+ V WY D Sbjct: 287 ----MLPLQPGDVLETSADTKALYEVIGFTPETTVKDGVKNFVNWYRD 330 >gi|229136781|ref|ZP_04265430.1| GDP-mannose 4,6 dehydratase [Bacillus cereus BDRD-ST196] gi|228646702|gb|EEL02888.1| GDP-mannose 4,6 dehydratase [Bacillus cereus BDRD-ST196] Length = 358 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 59/346 (17%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL--------FS 53 + ++TG G GS L +L+ + +V I + + + NL+ ++ + + F Sbjct: 3 KALITGVTGQDGSYLAEFLL-EKGYEVHGIIRRSSSYNLDRIESLVNEEIEGLNNQENFH 61 Query: 54 FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 DI D + + E +PD I N A+SHV S + + +GT +LE R+ Sbjct: 62 LHYGDITDTSNVIRLISEIRPDEIYNLGAQSHVKVSFDVPEYTADVDGVGTLRILEAVRI 121 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 + R Q ST E+YG + + E P+ P SPY K ++ + Sbjct: 122 LGLT------ETTRIYQASTSELYGKVQEVPQKETTPFYPRSPYGVAKIYGFWITKNYRE 175 Query: 174 TYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVED 228 +Y + +L ++ S G F + I LA R+ + LY G+ ++RDW Y +D Sbjct: 176 SYNMFAVNGILFNHESERRGE-TFVTRKITLAAARIAQEKQETLYLGNLDSLRDWGYAKD 234 Query: 229 HVRALYLVLKKGR-------IGERYN------------------IGGNNERKNIDIVFEI 263 +V ++L+L+ + GE + +G E K ID Sbjct: 235 YVECMWLILQHDKPEDFVIATGEMHTVREFTTLAFKHVGIELEWVGEEVEEKGIDKA--T 292 Query: 264 GFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 G +L A+ PK + RP + D +K K+ +GW P Sbjct: 293 GKVLVAVDPKFF-----------RPAEVEQLLGDPTKAKTLLGWNP 327 >gi|134291906|ref|YP_001115675.1| GDP-mannose 4,6-dehydratase [Burkholderia vietnamiensis G4] gi|134135095|gb|ABO59420.1| GDP-mannose 4,6-dehydratase [Burkholderia vietnamiensis G4] Length = 372 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQVD 58 ++TG G GS L L+N +V I + N + + + Q F D Sbjct: 7 LITGVTGQDGSYLAELLLNK-GYEVHGIKRRASLFNTDRIDHLYQDPHVSDRRFVLHHGD 65 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++ QPD I N AA+SHV S + + IG +LE R+ L Sbjct: 66 LTDSTSLVRIIQRVQPDEIYNLAAQSHVAVSFEEPEYTANADGIGALRILEAIRI----L 121 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YGI Sbjct: 122 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYREAYGIY 179 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI R+ G LY G+ +RDW + D+V + Sbjct: 180 ACNGILFNHESPVRGETFVTRKITRAIARIAAGLQDCLYLGNMSALRDWGHARDYVEMQW 239 Query: 235 LVLKK 239 L+L++ Sbjct: 240 LMLQQ 244 >gi|237741020|ref|ZP_04571501.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] gi|229431064|gb|EEO41276.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] Length = 329 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 142/331 (42%), Gaps = 43/331 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +YL+ + V+V+D L G+++++ E + L D+ Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNE-DVVVVDSLI-TGHVDAVDEKAHLELG-----DLK 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D E + +++Q D +++FAA S V S+ ++ N GT LL+ + Sbjct: 54 DEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLK-------VMKN 106 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D+ F ST YG + E P++PY +K + + + + YG+ Sbjct: 107 HNVDKIVFS--STAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYT 164 Query: 181 LSNCSNNYGPYHFPE---------KLIPLAITRMIEG-SHVFLYG------DGQNVRDWL 224 N G Y E LIPL + +E + +YG DG +RD++ Sbjct: 165 ALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALEQREKISIYGDDYPTPDGTCIRDYI 224 Query: 225 YVEDHVRALYLVLKKGRIG---ERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 +V D A YL L + R G + +N+ GN E ++ V E+ K H Sbjct: 225 HVMDLADAHYLALNRLRDGGDSQIFNL-GNGEGFSVKEVIEV-------TRKVTGHPIPA 276 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFPQEN 312 R G R S K + + W P+ N Sbjct: 277 EVSPRRAGDPARLIASSKKAINVLKWKPKYN 307 >gi|188582711|ref|YP_001926156.1| UDP-glucose 4-epimerase [Methylobacterium populi BJ001] gi|179346209|gb|ACB81621.1| UDP-glucose 4-epimerase [Methylobacterium populi BJ001] Length = 330 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 49/346 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++VTGGAG+IGS + LV+ +V+V+D L+ + E+ + D+ Sbjct: 1 MAVLVTGGAGYIGSHMVLALVDAGHEEVVVLDDLSTGYDWALPPEV------RLVVGDVA 54 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + + Q DAI +FAA+ V S+ + N + T L+E + Sbjct: 55 DQALVTETILRHQIDAIAHFAAKIVVPESVADPLGYYLANTVKTRALIE---------TA 105 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV----LAWGHTYG 176 + F+ ST VYG + E M NP +PY +K S++++ A G TYG Sbjct: 106 SRTGVKHFIFSSTAAVYGEPEIVPVPETMATNPINPYGRSKLMSEWMLADAAAAHGFTYG 165 Query: 177 IPVLLSNCSNNYGPYHFPEKLIPLAITRMI---------EGSHVFLYG------DGQNVR 221 + + + P + +P A T +I + +H+ ++G DG +R Sbjct: 166 VLRYFNVAGAD--PRGRSGQSMP-AATHLIKVATQAALGQRTHLEVFGTDYPTRDGSCLR 222 Query: 222 DWLYVEDHVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGF-LLDAL-IPKSYSHTE 279 D++ V D A +VL R G E ++ + G+ +L+ + + K S + Sbjct: 223 DYIQVSDLAAAHLVVLDHLR--------GGGESLTLNCGYGRGYSVLEVVEVVKRISGRD 274 Query: 280 L-IRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCW 323 +R RPG + + +I++E+GW P+ +++++ + + + W Sbjct: 275 FEVRLSPRRPGDPAQIIAGADRIRNELGWTPKHDDLDAIVAQALAW 320 >gi|327313548|ref|YP_004328985.1| GDP-mannose 4,6-dehydratase [Prevotella denticola F0289] gi|326945111|gb|AEA20996.1| GDP-mannose 4,6-dehydratase [Prevotella denticola F0289] Length = 380 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 30/278 (10%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F D+ D I + + +PD I N AA+SHV S + + +G +LE Sbjct: 70 FHLHYADLSDSMSILGVIGKVRPDEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRILEAV 129 Query: 112 R---LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLV 168 R + +C R Q ST E+YG +++ +E+ P++P SPY+ K ++V Sbjct: 130 RQLGMTATC---------RIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWIV 180 Query: 169 LAWGHTYGI----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDW 223 + Y + +L ++ S G F + I LA R+ +G LY G+ ++RDW Sbjct: 181 REYREAYNMYCCSGILFNHESERRGE-TFVTRKITLAAARIKQGKQDKLYLGNLSSLRDW 239 Query: 224 LYVEDHVRALYLVLKKGR-------IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 Y +D+V ++L+L++ + G ++++ + E+ F + + K Sbjct: 240 GYAKDYVECMWLILQQDKPEDFVIATGVQHSVREFCYHAFKRVGIELEFTGEGMEEKGID 299 Query: 277 HTELIRFIEDRPGHDRRYAI-----DSSKIKSEIGWFP 309 IE P R + D +K K+++GW P Sbjct: 300 KATGNVLIEVSPDFYRPTDVVNLWGDPTKAKAKLGWNP 337 >gi|290978844|ref|XP_002672145.1| NAD-dependent epimerase [Naegleria gruberi] gi|284085719|gb|EFC39401.1| NAD-dependent epimerase [Naegleria gruberi] Length = 782 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 29/289 (10%) Query: 52 FSFLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEET 111 F ++ D+C+ + +++ +++ AA++ V S+ +I NI+ LLE Sbjct: 212 FQVIEGDVCNTSILSEIFEKYTFTHVLHLAAQAGVRYSLKNPQTYIRNNILCQIELLE-- 269 Query: 112 RLWWSCLSQDKKDQFRFLQISTDEVYGSL---DKGLFSEDMPYN-PSSPYSATKASSDYL 167 + + K + F S+ VYG++ D F E M N P++ YSA+K S + Sbjct: 270 ----TSVKYQKTNPPVFAYASSSSVYGNIQEFDPSAFHEQMNINKPTNVYSASKISQELF 325 Query: 168 VLAWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYG-DGQN-VRDWLY 225 + + YGIPV+ YGPY P+ + + ++++G + LY +G+ +RD+ Y Sbjct: 326 AETYNYLYGIPVIGLRFFTVYGPYGRPDMALFSWVDQIVKGKPITLYTLEGKELMRDFTY 385 Query: 226 VEDHVRALYLVL--------KKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 ++D V + + ++GR + + +N+G + K D++ I K+ Sbjct: 386 IDDIVNGIINSMNYGDRVKREEGRAVHDVFNLGNHTPEKVTDMI--------KYIEKALD 437 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 I ++ P D + + + + P+ +E G+ K V WYL Sbjct: 438 KKAKINHVKKPPTDMTITFADITHSQELLNFQPKTKLEDGVRKFVDWYL 486 >gi|170699704|ref|ZP_02890740.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] gi|170135404|gb|EDT03696.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] Length = 316 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV +L VL +D + G ++ + + F L+ D+ Sbjct: 7 RILVTGGAGFLGSHLCERLV-ELGHDVLCVDNY-FTGTKQNVAALLGNPSFEALRHDV-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 63 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVMGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG D E P P + Y K ++ L + Sbjct: 108 KRTHARVLQTSTSEVYGDPDVHPQPESYRGNVNPLGPRACYDEGKRCAETLFFDYHRQQN 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + + G ++ LYGDG R + YV+D V L Sbjct: 168 VRIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGENITLYGDGSQTRAFCYVDDMVDGLI 227 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + N+G +E I L ++ + S + L+ +D P Sbjct: 228 RMMASPADLTGPINLGNPHE-------IAISELAQIILRLTGSKSRLVFRPLPKDDP--- 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ + W P +E+GL +T+ ++ Sbjct: 278 TQRCPDIGLARAHLDWAPTVGLEAGLRRTIDYF 310 >gi|332709243|ref|ZP_08429207.1| UDP-glucose 4-epimerase [Lyngbya majuscula 3L] gi|332351968|gb|EGJ31544.1| UDP-glucose 4-epimerase [Lyngbya majuscula 3L] Length = 318 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 137/331 (41%), Gaps = 33/331 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDI- 59 M IVTGGAGFIGS L L+++ Q+ V+D L SL+ + + FLQ DI Sbjct: 1 MHFIVTGGAGFIGSHLTEQLLSEGH-QITVVDNLATG----SLQNLPKHPNLKFLQKDIS 55 Query: 60 -CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 C E + + D I + AA V S L E N+ T ++E + Sbjct: 56 TCKPEDFITKFTN-KIDGIAHLAATPSVTASWLQPLEAHHNNLSATIAVIELCKTL---- 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + S+ VYG+ + SE+ +P SPY K S+ + Sbjct: 111 -----NIPKLVFASSAAVYGNPTQVPISENQQTSPISPYGLQKLVSEQYASLFAKQIDFS 165 Query: 179 VLLSNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVR--- 231 + N +GP P +I + + M + +YGDG RD++YV+D R Sbjct: 166 FVGLRFFNVFGPRQVPNSPYSGVISIFVNAMQHSLPITIYGDGTQTRDFIYVKDVARAFA 225 Query: 232 -ALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 AL L+ G N+G + +V L P+ S T +F RPG Sbjct: 226 KALTTPLESGSC-LICNLGTGKSTSLLQLVDS----LKTCFPQWKSET---KFAPPRPGD 277 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 + D S S + + Q ++ESGL + + Sbjct: 278 IKHSQADISIASSCLDFTAQWSVESGLQRLI 308 >gi|302388299|ref|YP_003824121.1| UDP-glucose 4-epimerase [Clostridium saccharolyticum WM1] gi|302198927|gb|ADL06498.1| UDP-glucose 4-epimerase [Clostridium saccharolyticum WM1] Length = 338 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 149/358 (41%), Gaps = 54/358 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLK-EISQSNLFSFLQVDI 59 MR++VTGGAG+IGS C L+ +V+V+D L + ++ + E +F + D+ Sbjct: 1 MRILVTGGAGYIGSHTCIELLEQGH-EVVVVDNLCNSSKVSLERVEAITGKTVAFYEADL 59 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 DRE + + DA+++FA V S+ E+ NI GT IL + R + Sbjct: 60 LDREALEKIFAKEAIDAVIHFAGLKAVGESVAKPLEYYHNNITGTLILCDVMR------A 113 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNP-SSPYSATKASSDYLVLAWGHTYGI- 177 K+ + S+ VYG +ED P ++PY TK+ + ++ HT Sbjct: 114 HHVKN---IIFSSSATVYGDPAFVPITEDCPKGKITNPYGQTKSMLEQILTDL-HTADPE 169 Query: 178 -PVLLSNCSNNYG----------PYHFPEKLIPLAITRMIEGS--HVFLYGD------GQ 218 V+L N G P P L P IT++ G V ++GD G Sbjct: 170 WSVILLRYFNPVGAHKSGLIGEDPAGIPNNLTPY-ITQVAVGKLKEVGVFGDDYDTPDGT 228 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV+AL + G YN+G + ++ IP S Sbjct: 229 GVRDYIHVVDLALGHVKALEKIASSGPEVRIYNLGTGQGFSVLQMIEAFSKACGKSIPYS 288 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 RPG D S K E+GW ++ +C +++W W+ Sbjct: 289 IK--------PRRPGDIAACYADVSLAKKELGWEAARGIDE-----MC---EDSWRWQ 330 >gi|241258848|ref|YP_002978732.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863318|gb|ACS60981.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 347 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/333 (22%), Positives = 141/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GF+GS LC L+ + VL +D Y G+ +++ + F L+ DI Sbjct: 6 RIMVTGGTGFLGSFLCERLLREGN-DVLCVDNY-YTGSRDNVLHLLDDPRFEILRHDITF 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + TN+ G + L Sbjct: 64 PLYV-------EVDEIYNLACPASPVHYQFDPVQTVKTNVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG +ED P P + Y K ++ L + YG Sbjct: 107 KRTKAKIFQASTSEVYGDPAVHPQTEDYRGSVNPIGPRACYDEGKRCAETLFFDYHRQYG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP +++ I + + + ++G+G R + YV+D + + Sbjct: 167 VEIRVARIFNTYGPRMQTNDGRVVSNFIVQALRNESITIFGNGTQTRSFCYVDDLIDGFI 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ + N+G E F++ L + +I + S + ++ D P Sbjct: 227 RLMGAPAGVTGPINLGNPGE-------FQVRELAEMVIEMTGSKSGIVFNPLPVDDPTQR 279 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S+ ++GW P+ N+ GL +T+ ++ Sbjct: 280 KP---DISRATQQLGWQPKVNLREGLERTIAYF 309 >gi|218779502|ref|YP_002430820.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] gi|218760886|gb|ACL03352.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans AK-01] Length = 316 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 46/339 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS LC L+ D +VL +D + G+ +++ ++ + F L+ DI Sbjct: 6 KVLVTGGAGFLGSHLCERLL-DASCEVLCVDNF-FTGSRQNVQHLTDNPRFELLRHDITF 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITT--NIIGTFILLEETRLWWSCLS 119 + D I N A + D +TT N+ G +L Sbjct: 64 PLYVHV-------DEIYNLACPASPIH--YQNDPVMTTRVNVHGAINML----------G 104 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPY-------NPSSPYSATKASSDYLVLAWG 172 K+ + Q ST EVYG D + + Y P S Y K ++ L + Sbjct: 105 LAKRVSAKIFQASTSEVYG--DPEIHPQPESYWGHVHCVGPRSCYDEGKRCAETLFFDYY 162 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHV 230 +G+ + ++ N YGP+ P +++ I + ++ + +YGDG R + YV+D V Sbjct: 163 REHGLKIKVARIFNTYGPHMHPHDGRVVSNFIIQALQNEPITVYGDGSQTRSFCYVDDLV 222 Query: 231 RA-LYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPG 289 + L+ + N+G E +++ ++ ++ + S+ D P Sbjct: 223 EGFIRLMNSPDEVTGPMNLGNPGEFTILELAEKVISIIGSSSKISFL---------DLPA 273 Query: 290 HD-RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D ++ D ++ K +GW P+ +E GL KT+ Y DN Sbjct: 274 DDPKQRKPDITQAKDVLGWEPKIRLEQGLLKTIA-YFDN 311 >gi|307825869|ref|ZP_07656085.1| GDP-mannose 4,6-dehydratase [Methylobacter tundripaludum SV96] gi|307733177|gb|EFO04038.1| GDP-mannose 4,6-dehydratase [Methylobacter tundripaludum SV96] Length = 361 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 29/328 (8%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV-D 58 ++TG G G+ L +L+ I V I + + N + + + Q N FL D Sbjct: 6 LITGITGQDGAYLAEFLLQKGYI-VHGIKRRSSLFNTDRIDHLYQDPHVKNARFFLHFGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + +++ QPD I N AA SHV S + + IGT LLE R+ L Sbjct: 65 LTDATNLIRIIQQVQPDEIYNLAAMSHVAVSFDTPEYTANADGIGTLRLLEAIRI----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ R+ G LY G+ +RDW + +D+V + Sbjct: 179 ACNGILFNHESPIRGETFVTRKITRALARIKLGLQDCLYLGNLDALRDWGHAKDYVEMQW 238 Query: 235 LVLKKGRIGERYNIGGNNE---RKNIDIVF-EIGFLL----DALIPKSY-SHTELIRFIE 285 L+L++ + E + I + R+ +DI E+G + + K Y + I ++ Sbjct: 239 LMLQQEQ-AEDFVIATGVQYSVRQFVDIAAKELGITITWQGSGVEEKGYDAQGRCIVQVD 297 Query: 286 D---RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D SK K ++GW P+ Sbjct: 298 ARYFRPTEVETLLGDPSKAKEKLGWTPK 325 >gi|304321009|ref|YP_003854652.1| NAD-dependent epimerase/dehydratase family protein [Parvularcula bermudensis HTCC2503] gi|303299911|gb|ADM09510.1| NAD-dependent epimerase/dehydratase family protein [Parvularcula bermudensis HTCC2503] Length = 332 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/341 (23%), Positives = 149/341 (43%), Gaps = 33/341 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTY----AGNLNSLKEISQSNLFSFLQ 56 MR++VTG AGFIGS C L+ D V +D L A + L+ + + F+F + Sbjct: 1 MRVLVTGAAGFIGSYTCHALL-DRGWTVTGVDCLNAYYDPALKQDRLRFLEARDGFTFTK 59 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 VD+ D + + F D +++ AA++ V S+ ++ +N+ +LE R Sbjct: 60 VDLSDAAAVANIGSAF--DIVIHLAAQAGVRYSLENPLSYVDSNVRAHLNVLELVR---- 113 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYN-PSSPYSATKASSDYLVLAWGHTY 175 + F + S+ VYG F E + P S Y+ATK S + L ++ + Sbjct: 114 ---HAETPPF-LIYASSSSVYGDTTPAPFQETARADQPVSLYAATKRSCELLSESYTAVF 169 Query: 176 GIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYL 235 + + YGP+ P+ RM +G + ++ +G+ RD+ +++D + + Sbjct: 170 DLAQVGLRFFTVYGPWGRPDMAYWSFAERMAKGEPIDVFNNGKLGRDFTWIDDVIDGIVR 229 Query: 236 VLKKGRI-GER------YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 + + G GE YNIG + + + ++ ++ T + +P Sbjct: 230 IAEGGPTPGEARGRHRVYNIGNSRPEPLMHFI--------EVLERAMGMTATKVMLPMQP 281 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNW 329 G + A D+ + + G+ ++E+GL W+ N+W Sbjct: 282 GDVHQTAADTGHLAEDYGFAATTSIETGLPIFADWF--NSW 320 >gi|194431490|ref|ZP_03063782.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae 1012] gi|194420315|gb|EDX36392.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae 1012] gi|332091764|gb|EGI96843.1| GDP-mannose 4,6-dehydratase [Shigella dysenteriae 155-74] Length = 373 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 16/245 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN-----LFSFLQVD 58 ++TG G GS L +L+ +V I + + N + I Q F D Sbjct: 6 LITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCDPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + +GT LLE R L Sbjct: 65 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKK 239 ++L++ Sbjct: 239 MMLQQ 243 >gi|148657755|ref|YP_001277960.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148569865|gb|ABQ92010.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 321 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 29/319 (9%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR+ +TG G +GSAL YLV ++V + + + + + + + DI Sbjct: 1 MRVFITGITGPVGSALADYLVTLPGVEVHAFKR--WRSDTRPIAHLL--GRITVHEGDIE 56 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D + A++ P+ + + AA+S+ S + TN+ GT LLE R + Sbjct: 57 DPYSVARAVERAAPERVYHLAAQSYPSESWDAPVVTMRTNVEGTINLLEAVRRY------ 110 Query: 121 DKKDQFRFLQISTDEVYG--SLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + R T YG ++ E P P SPY +K ++ L + YG+ Sbjct: 111 --APRARVHIAGTSAEYGWVRPEETPIRETHPTRPLSPYGVSKVAAGLSGLQYAANYGLH 168 Query: 179 VLLSNCSNNYGPYHFPEKLIPLAITRMIEGSH-----VFLYGDGQNVRDWLYVEDHVRAL 233 V+++ N+ GP+ I +M H V G+ + RD+ + D AL Sbjct: 169 VVVTRSFNHVGPHQGDRCAIQTFCRQMALIEHDRQEPVIYVGNLEARRDFTHTRDVAHAL 228 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIED--RPGHD 291 +L+L GE YN+ + DIV AL+ +S +R RP + Sbjct: 229 WLLLDHSVSGEIYNLCSGVATRIGDIV--------ALVQRSGRVATEVRIDPSRLRPSDE 280 Query: 292 RRYAIDSSKIKSEIGWFPQ 310 D++K++ GW PQ Sbjct: 281 PLLVGDNTKLRQATGWAPQ 299 >gi|261351040|ref|ZP_05976457.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii DSM 2374] gi|288860380|gb|EFC92678.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii DSM 2374] Length = 309 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 31/331 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +I+TGG GFIGS + L+ D V +ID L+ +G + +LK + NL + ++ ++ D Sbjct: 5 NIIITGGLGFIGSHIADELIEDN--NVTIIDNLS-SGKVENLKNPAHENL-TIIKNNLND 60 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + D I + AA + V S+ + N+ T +L + +Q+ Sbjct: 61 MNLDETFA---DTDYIFHLAAMASVPLSVNDPIKCNDNNVNSTI------KLLTAAKNQN 111 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL 181 K + + S+ VYG+ E P+SPY+A+KA+ + + A+ +YG+ + Sbjct: 112 VK---KVIFSSSSAVYGNNANMPLKESELMMPTSPYAASKANCELYLQAFEESYGLKSIA 168 Query: 182 SNCSNNYGPYHFPEK----LIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVL 237 N +GP +IP I ++ H +YGDGQ RD+++V+D +A Sbjct: 169 LRYFNVFGPKQDKNSQYAAVIPNFIDAILNNEHPIIYGDGQQTRDFIFVKDVAKANIAAA 228 Query: 238 KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAID 297 + G NI E+ ++ ++EI + D++ S+ E + +++ R G D ++I Sbjct: 229 ESNYTGP-VNIAT-GEKLTVNRLYEI--IADSM----ESNLEPV-YVDKRKG-DIEHSIA 278 Query: 298 SSKIKSEIGW-FPQENMESGLNKTVCWYLDN 327 SEI + N +N+T+ W+ +N Sbjct: 279 DIDKMSEINFKADSSNFVKQINETIQWFKEN 309 >gi|60681056|ref|YP_211200.1| putative dNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] gi|60492490|emb|CAH07260.1| putative dNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] Length = 314 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 40/334 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGFIGS LC L+N+ V+ +D + G+ ++++ + ++ F ++ D+ Sbjct: 4 RILVTGGAGFIGSHLCERLLNEGN-DVICLDNY-FTGSKDNIRHLLDNHNFELVRHDV-- 59 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + T+I G + L Sbjct: 60 -----TTPYYAEVDEIYNLACPASPPHYQYNPIKTMKTSIYGAM----------NMLGLA 104 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDMPY----NP---SSPYSATKASSDYLVLAWGHT 174 K+ + + LQ ST EVYG D + + Y NP S Y K +S+ L + + Sbjct: 105 KRTRAKILQASTSEVYG--DPSIHPQVEAYWGNVNPIGIRSCYDEGKRASETLFMDYHRQ 162 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA 232 G+ + + N YGP P +++ I + + + +YG+G R + YV+D + A Sbjct: 163 NGVRIKIIRIFNTYGPRMNPNDGRVVSNFIVQALRNQDITIYGNGSQTRSFQYVDDLIEA 222 Query: 233 LYLVLKKGR--IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGH 290 + ++ IG N G +E +++ ++ L + S S D P Sbjct: 223 MTRMMATNDSFIGP-VNTGNPSEFTMLELAQKVIDLTN-----SKSKIVFCPLPSDDPKQ 276 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 R+ I +K K GW PQ +E GL KT+ ++ Sbjct: 277 -RKPDISLAKEKLA-GWEPQIKLEEGLKKTIAYF 308 >gi|51243877|ref|YP_063761.1| GDP-mannose-4,6-dehydratase [Desulfotalea psychrophila LSv54] gi|50874914|emb|CAG34754.1| probable GDP-mannose-4,6-dehydratase [Desulfotalea psychrophila LSv54] Length = 373 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 20/249 (8%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV 57 + ++TG G GS L L+ + +V I + + N + I Q N FL Sbjct: 5 KALITGITGQDGSYLAELLL-EKGYEVHGIKRRASSFNTERIDHIYQDPNAENPRFFLHY 63 Query: 58 -DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNII--GTFILLEETRLW 114 D+ D + LKE QPD + N AA+SHV S A E+ T +++ GT +LE R Sbjct: 64 GDLTDSSNLTRILKEVQPDEVYNLAAQSHVAVS-FEAPEY-TADVVANGTLRILEAIRF- 120 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 L +KK RF Q ST E++G + + +E P++P SPY+ K + ++ + + + Sbjct: 121 ---LGLEKKT--RFYQASTSELFGEVQEIPQTETTPFHPRSPYAVAKMYAYWITINYRES 175 Query: 175 YGIPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHV 230 YG+ N+ P F + I A + +G +Y G+ +RDW + +D+V Sbjct: 176 YGMYACNGILFNHESPRRGETFVTRKITRAFANIAQGLEECVYLGNMDALRDWGHAKDYV 235 Query: 231 RALYLVLKK 239 R +++L++ Sbjct: 236 RMQWMMLQQ 244 >gi|209552261|ref|YP_002284176.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539373|gb|ACI59305.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 346 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGG GF+GS LC L+ + VL +D Y G+ +++ + F L+ DI Sbjct: 6 RIMVTGGTGFLGSFLCERLLREGN-DVLCVDNY-YTGSRDNVLHLLDDPRFEILRHDITF 63 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + + TN+ G + L Sbjct: 64 PLYV-------EVDEIYNLACPASPVHYQHDPVQTVKTNVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + + Q ST EVYG E+ P P + Y K ++ L + YG Sbjct: 107 KRTKAKIFQASTSEVYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFDYHRQYG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + ++ N YGP +++ I + ++ + ++G+G R + YV+D + + Sbjct: 167 VEIRVARIFNTYGPRMQTNDGRVVSNFIVQALQNQPITIFGNGTQTRSFCYVDDLIEGFI 226 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 L+ + N+G E F++ L + +I + S + ++ D P Sbjct: 227 RLMGAPAGVTGPINLGNPGE-------FQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQR 279 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D S+ K ++GW P N+ GL KT+ ++ Sbjct: 280 KP---DISRAKQDLGWQPTVNLREGLEKTIAYF 309 >gi|119489819|ref|ZP_01622574.1| dTDP-glucose 4-6-dehydratase [Lyngbya sp. PCC 8106] gi|119454247|gb|EAW35398.1| dTDP-glucose 4-6-dehydratase [Lyngbya sp. PCC 8106] Length = 315 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 35/328 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ +V+ +D + G +L + + F ++ DI Sbjct: 1 MRILVTGGAGFIGSHLIDRLMEQGH-EVVCLDNF-FTGTKRNLVKWFGNPYFELIRHDIT 58 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 E IR + D I + A + + I TN++GT + L Sbjct: 59 --EPIR-----IEADQIYHLACPASPVHYQYNPVKTIKTNVLGTM----------NMLGL 101 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + RFL ST EVYG D +ED P S Y K ++ L + Sbjct: 102 AKRVKARFLLASTSEVYGDPDVHPQTEDYRGNVNPIGIRSCYDEGKRVAETLAFDYHRQN 161 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + ++ N YGP +++ + + ++G + +YGDG R + YV + V L Sbjct: 162 GIDIRVARIFNTYGPRMLENDGRVVSNFVVQALQGIPLTVYGDGSQTRSFCYVSNLVDGL 221 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ IG N+G +E + + +I +++ S + + +D P R+ Sbjct: 222 MRLMNGDYIGP-VNLGNPSEYTILQLAQKIQQMVN-----SDAEIQYKPLPQDDP---RQ 272 Query: 294 YAIDSSKIKSEIGWFPQENMESGLNKTV 321 D +K K+ + W +E GL T+ Sbjct: 273 RQPDITKAKTYLNWEATVPLEEGLKLTI 300 >gi|158335344|ref|YP_001516516.1| NAD-dependent epimerase/dehydratase [Acaryochloris marina MBIC11017] gi|158305585|gb|ABW27202.1| NAD-dependent epimerase/dehydratase [Acaryochloris marina MBIC11017] Length = 327 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 47/339 (13%) Query: 3 LIVTGGAGFIGSALCRYLV-NDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD--- 58 +++TG G +GS + + LV ++ LV D + QS LF+ D Sbjct: 10 VLITGCTGLLGSWMTQELVARGARVVGLVRDW------------VPQSRLFTEGLSDKIT 57 Query: 59 -----ICDRECIRSALKEFQPDAIVNFAAESHV---DRSILGADEFITTNIIGTFILLEE 110 I D + A+ E++ D + + AA++ V +R LG E NI GT+ +LE Sbjct: 58 TVYGGIEDLGVLERAINEYEVDTVFHLAAQTIVGVANREPLGTFE---ANIKGTWNVLEA 114 Query: 111 TRLWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLA 170 R R + S+D+ YG + + E P PY +K+ +D L Sbjct: 115 CRRVGGV--------SRIVVASSDKAYGDQEILPYDEQTPLQGEHPYDVSKSCADLLCRT 166 Query: 171 WGHTYGIPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 + TY +PV ++ C N YG +++P I + + + DG +RD+ YV+D Sbjct: 167 YYVTYNLPVCITRCGNFYGGGDLNFNRIVPDTIRSTLRDKPIVIRSDGTYIRDYFYVKDG 226 Query: 230 VRA-LYLVLKKGR---IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V A L+L + R +GE +N + +++V +I L+ K + ++ + Sbjct: 227 VLAYLHLAEQMDRPEILGEAFNFSNELQISVLELVHKIL----KLMGKPHLEPTILNQAQ 282 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + H + + K + + W ++++ L +T+ WY Sbjct: 283 NEIKHQY---LSAEKARRLLDWKSPYDLDAALLETIQWY 318 >gi|77463729|ref|YP_353233.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] gi|77388147|gb|ABA79332.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] Length = 330 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 44/341 (12%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS C+ L + + D L+ G+ ++++ +Q D+ D Sbjct: 5 ILVTGGAGFIGSHTCKALAR-AGHRPVSFDNLS-TGHADAVR------FGPLVQGDVRDP 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +AL+ A+++FAA ++V S+ ++ N+ G L++ R Sbjct: 57 NAVEAALRAHGAKAVIHFAASAYVGESMADPAKYYDNNVGGMIGLVQGCRAAGVS----- 111 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLL- 181 R + S+ YG+ D+ E P P +PY TK + ++ G V L Sbjct: 112 ----RIVFSSSCATYGTPDRLPIRETTPQRPINPYGRTKLIGEEILRDLGVEGMRHVALR 167 Query: 182 ------SNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVRDWLYVE 227 ++ G H PE L+PLA+ +G + ++G DG +RD+++V Sbjct: 168 YFNAAGADPEGELGERHDPETHLLPLALRAASGQGGPLSIFGTDYPTPDGTCIRDYIHVA 227 Query: 228 DHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 D RA L L + G N+G + +IV I + +P +R Sbjct: 228 DLARAHVLALGRLMAGGESLAVNLGTGRGQSVREIVAAIERITGRAVP--------VRLE 279 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 RPG D + SE+G+ Q ++ S + W+ Sbjct: 280 ARRPGDPAELVADPALAASELGFRTQLSDIGSIVRHAAPWF 320 >gi|113970944|ref|YP_734737.1| UDP-galactose 4-epimerase [Shewanella sp. MR-4] gi|113885628|gb|ABI39680.1| UDP-galactose 4-epimerase [Shewanella sp. MR-4] Length = 337 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ L+N +V+V+D L+ + LN ++ I+ +F Q D Sbjct: 1 MTILVTGGAGYIGTHTVVELLN-AGSEVIVLDNLSNSSIEALNRVERIT-GKAVTFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + DA+++FA V S+ ++ N+ GT IL + + Sbjct: 59 ILNKALLQKVFSDHNIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQ-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ K F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFKVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 Y PV ++ S G P P L+P I ++ G L +G DG Sbjct: 170 NIARLRYFNPV-GAHASGLIGEDPNDIPNNLMPF-IAQVAVGKRKALSVFGNDYPTHDGT 227 Query: 219 NVRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D H++AL L K G + YN+G +D+V FE Sbjct: 228 GVRDYIHVVDLALGHLKALEKLATKPGLV--TYNLGTGQGYSVLDMVKAFE--------- 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ + + RPG + K+++GW ++E N + W N Sbjct: 277 -KACGKSIAYQIAPRRPGDIAACYANPDHAKTDLGWQATHSLEDMANSSWHWQSTN 331 >gi|301307894|ref|ZP_07213850.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 20_3] gi|300834237|gb|EFK64851.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 20_3] Length = 362 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 25/324 (7%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 ++TG G GS L +L+ D V I + + + + F D+ D Sbjct: 5 LITGITGQDGSFLAEFLL-DKGYDVHGIIRRSSVDYRERIAHLEGKPHFHLHYADMGDSM 63 Query: 64 CIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDKK 123 + + + QP I N AA+SHV S + + +G +LE R + + Sbjct: 64 SLVKLVGKVQPTEIYNLAAQSHVQVSFDAPEFTADVDAVGVLRILEAVR------TNHLE 117 Query: 124 DQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI----PV 179 + Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + + Sbjct: 118 KTCKIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKLYGYWIVKEYREAYNMFCCSGI 177 Query: 180 LLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALYLVLK 238 L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V ++L+L+ Sbjct: 178 LFNHESERRGET-FVTRKITLAAARIAQGKQDCLYLGNLDSLRDWGYAKDYVECMWLILQ 236 Query: 239 KGRIGERYNIGG--NNERKNIDIVFEI--------GFLLDALIPKSYSHTELIRFIED-- 286 + + + G + R+ + F G +D + + L+ ED Sbjct: 237 QDKPQDFVIATGVQHTVREFATLAFHYAGIELRWEGEGIDEKGIDAKTGKVLVAVSEDFY 296 Query: 287 RPGHDRRYAIDSSKIKSEIGWFPQ 310 RP D +K K+E+GW PQ Sbjct: 297 RPTDVVNLWGDPTKAKNELGWNPQ 320 >gi|229526707|ref|ZP_04416111.1| UDP-glucose 4-epimerase [Vibrio cholerae bv. albensis VL426] gi|229336865|gb|EEO01883.1| UDP-glucose 4-epimerase [Vibrio cholerae bv. albensis VL426] Length = 338 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 88/360 (24%), Positives = 149/360 (41%), Gaps = 62/360 (17%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGG G+IGS C ++ + +++D L Y + L I + F+Q D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQ-AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +++ +A+V+FA V S+ E+ N+ GT IL+ R Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLILVAAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + S+ VYG +E P ++PY + KA+ D+ Sbjct: 113 ---EAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LV--LAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG----- 215 + L + + G S+ S G P P L+P +T++ G +L +G Sbjct: 170 SISLLRYFNPVG-----SHPSGELGEDPQGIPNNLMPF-VTQVAVGRREYLSVFGSDYPT 223 Query: 216 -DGQNVRDWLYVEDHVRALYLVLKKGRIG-----ERYNIGGNNERKNIDIV--FEIGFLL 267 DG VRD+++V D LKK +G YN+G +D+V FE Sbjct: 224 KDGTGVRDYIHVMDLADGHIAALKK--VGTCAGLHIYNLGTGKGYSVLDVVKAFE----- 276 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + T + ++ RPG Y D +K ++GW N+ + CW +N Sbjct: 277 -----TASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNN 331 >gi|227820018|ref|YP_002823989.1| dTDP-glucose 4-6-dehydratase [Sinorhizobium fredii NGR234] gi|227339017|gb|ACP23236.1| dTDP-glucose 4-6-dehydratase [Sinorhizobium fredii NGR234] Length = 346 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 41/331 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC L+ QV+ D + G +++ + + + F + DI + Sbjct: 29 RVLVTGGAGFLGSHLCALLLK-AGHQVICADNFS-TGLRRNVEPLMRYDGFHLIAHDIVE 86 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T ++G+ +LE + + Sbjct: 87 P-------LDVEVDEIYNLACPASPPHYQADPIQTTKTCVLGSLNMLELAARYDA----- 134 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 R LQ ST E+YG E P+ P S Y K ++ L + T Sbjct: 135 -----RILQASTSEIYGDPQVHPQVESYWGNVNPFGPRSCYDEGKRCAESLFFDFHKTRQ 189 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRA-L 233 + + + N YGP P+ +++ I + ++G + +YGDG R + +V+D + + Sbjct: 190 VEIKVVRIFNTYGPRMRPDDGRVVSNFIVQALKGEDITVYGDGSQTRSFCFVDDLIDGFV 249 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP---GH 290 L+ + N+G E F I L + +I + S +++++ RP Sbjct: 250 RLMASPASLTAPINLGNPGE-------FTIVELAEQVIELTGSRSKIVQ----RPLPVDD 298 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTV 321 R+ D S + E+GW P+ + +GL T+ Sbjct: 299 PRQRRPDISLAERELGWRPRVELTAGLMHTI 329 >gi|163740051|ref|ZP_02147455.1| GDP-mannose 4,6-dehydratase [Phaeobacter gallaeciensis BS107] gi|161386682|gb|EDQ11047.1| GDP-mannose 4,6-dehydratase [Phaeobacter gallaeciensis BS107] Length = 372 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 16/247 (6%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L +L+ +V + + + N + I Q F Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYEVHGLKRRASSFNTQRVDHIYQDPHTDHARFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E +PD + N A+SHV S + + IGT LLE R Sbjct: 62 GDLTDTSNLTRLLSEIEPDEVYNLGAQSHVAVSFEAPEYTADVDGIGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+ K S ++ + + YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKLYSYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ +RDW + +D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEDCLYMGNIDALRDWGHAKDYVRM 235 Query: 233 LYLVLKK 239 +++L++ Sbjct: 236 QWMMLQQ 242 >gi|163800664|ref|ZP_02194565.1| UDP-glucose 4-epimerase [Vibrio sp. AND4] gi|159176107|gb|EDP60901.1| UDP-glucose 4-epimerase [Vibrio sp. AND4] Length = 338 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 52/355 (14%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLF--SFLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + + +F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKPTVLERIEKVSGVKPAFIEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + A+ +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKAALVDAMHAHNIEAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSAT------------KASSDY 166 + + S+ VYG E+ P + ++PY + KA+ D+ Sbjct: 113 ---EAGVKSIVFSSSATVYGDPASVPIMENFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 167 LVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------D 216 + Y PV S+ + G P P L+P ++++ G FL +G D Sbjct: 170 SITLL--RYFNPV-GSHPTGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYSTKD 225 Query: 217 GQNVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIP 272 G VRD+++V D HV AL V K + YN+G N +++V +P Sbjct: 226 GTGVRDYIHVMDLSDGHVAALDKVGNKAGL-HIYNLGTGNGYSVLEMVKAFEAACGREVP 284 Query: 273 KSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + ++ RPG D SK +E+GW + +E + T W +N Sbjct: 285 --------FKLVDRRPGDIAECWADPSKAANELGWKAERTLEEMTSDTWRWQSNN 331 >gi|83855105|ref|ZP_00948635.1| NAD-dependent epimerase/dehydratase [Sulfitobacter sp. NAS-14.1] gi|83842948|gb|EAP82115.1| NAD-dependent epimerase/dehydratase [Sulfitobacter sp. NAS-14.1] Length = 374 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 18/248 (7%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNL-----FSFLQ 56 R ++TG G GS L L+ D +V I + + + N + I Q Sbjct: 4 RALITGITGQDGSYLAELLL-DKGYEVHGIKRRSSSLNTQRIDHIYQDPHEDDPDLILHY 62 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + ++E QPD + N A+SHV S + N G LLE R Sbjct: 63 GDLTDSSNLTRIMREVQPDEVYNLGAQSHVAVSFETPEYTTEANANGALRLLEAIRF--- 119 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + +E+ P++P SPY+ K + ++ + + YG Sbjct: 120 -LGFEKKT--RFYQASTSELYGLVQETPQTEETPFHPRSPYAVAKMYAYWITVNYREAYG 176 Query: 177 I----PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVR 231 I +L ++ S G F + I + + +G LY G+ +RDW + +D+VR Sbjct: 177 IYACNGILFNHESARRGET-FVTRKITRGLANIAQGLEGCLYMGNIDALRDWGHAKDYVR 235 Query: 232 ALYLVLKK 239 +++L++ Sbjct: 236 MQWMMLQQ 243 >gi|167749825|ref|ZP_02421952.1| hypothetical protein EUBSIR_00793 [Eubacterium siraeum DSM 15702] gi|167657137|gb|EDS01267.1| hypothetical protein EUBSIR_00793 [Eubacterium siraeum DSM 15702] gi|291531049|emb|CBK96634.1| UDP-galactose 4-epimerase [Eubacterium siraeum 70/3] gi|291557485|emb|CBL34602.1| UDP-galactose 4-epimerase [Eubacterium siraeum V10Sc8a] Length = 332 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 145/343 (42%), Gaps = 54/343 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKL--TYAGNLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IGS C L+N + ++VID + + ++KEI+ + F F + D Sbjct: 1 MAVLVTGGAGYIGSHTCVELLNAGE-DIIVIDNFYNSKPKAIEAIKEITGRD-FRFYEND 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 CDRE + +E +++FA V S + + NI T L+ ET + C Sbjct: 59 CCDREALDRIFRENFITEVIHFAGYKAVGESCVKPIMYYENNINSTLALI-ETMQKYGC- 116 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK-----------ASSD-- 165 KK F S+ VYG DK +ED P + +PY +TK AS D Sbjct: 117 ---KKLVFS----SSATVYGIPDKVPVTEDFPLSAINPYGSTKLMIENMCRELYASDDQW 169 Query: 166 -YLVLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG----- 215 ++L + + G ++ S G P P L+PL I R G L +G Sbjct: 170 SIILLRYFNPIG-----AHESGKLGEDPNGIPNNLMPL-ILRTASGKMATLSVFGNDYPT 223 Query: 216 -DGQNVRDWLYVEDHVRALYLVLKKGRIGE---RYNIGGNNERKNIDIVFEIGFLLDALI 271 DG VRD+++V D +K R YN+G +DI+ + + Sbjct: 224 PDGTCVRDYIHVVDLALGHVAAIKAARAHTGCPAYNLGTGKGYSVLDIINAFEKVNKVKV 283 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENME 314 P + RPG + S K ++GW + +E Sbjct: 284 PYVITGR--------RPGDAAACYSNPSLAKKKLGWTAKRGLE 318 >gi|27502135|gb|AAO17415.1| NAD dependent epimerase/dehydratase-like protein [Pseudomonas aeruginosa] Length = 341 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 94/341 (27%), Positives = 145/341 (42%), Gaps = 42/341 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEI------SQSNLFSFLQV 57 ++TG AGFIGS L L+ L +V+ +D G+ +L E+ Q + F +Q Sbjct: 20 LITGVAGFIGSNLLETLLK-LDQKVVGLDNFA-TGHQRNLDEVRSLVSEKQWSNFKLIQG 77 Query: 58 DI-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 DI C+ C D +++ AA V RSI TNI G +L R Sbjct: 78 DIRNLDDCNNACAGV-------DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWG 172 D K Q F ++ YG ED P SPY+ TK ++ + Sbjct: 131 --------DAKVQ-SFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS 181 Query: 173 HTYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVED 228 YG + N +G P +IP + MI+G V++ GDG+ RD+ Y+E+ Sbjct: 182 RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN 241 Query: 229 HVRALYLVLKKG--RIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFI 284 V+A L G + YNI GG R +++ +F L D L S+ + Sbjct: 242 TVQANLLAATAGLDARNQVYNIAVGG---RTSLNQLFFA--LRDGLAENGVSYHREPVYR 296 Query: 285 EDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 + R G R D SK +G+ P+ ++ +G+ + WY+ Sbjct: 297 DFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI 337 >gi|307265739|ref|ZP_07547291.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919253|gb|EFN49475.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] Length = 329 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 144/332 (43%), Gaps = 50/332 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 M ++V GGAG+IGS L+ K +V++ID L + KE S L L + D+ Sbjct: 1 MAILVCGGAGYIGSHTVVALLRR-KEEVVIIDNL-----ITGHKE---SVLGGKLYIGDL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + E + +A+++FAA S V S+ ++ N+ GT LL+ + Sbjct: 52 KDEVFLDKVFTENEIEAVIDFAAFSLVGESVSEPFKYYENNVCGTLSLLK---------A 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH-TYGIP 178 K + + + ST VYG ++ E+ NP+SPY TK + + + L W YGI Sbjct: 103 MKKHNVGKIVFSSTAAVYGEPERIPIKEEDKTNPTSPYGETKLAVEKM-LKWADVAYGIK 161 Query: 179 VLLSNCSNNYGPYHFPE---------KLIPLAITRMI-EGSHVFLYG------DGQNVRD 222 + N G E LIP+ + + + + +YG DG +RD Sbjct: 162 YVALRYFNVAGAIETGEIGEDHSTETHLIPIILQVALGKREKIMIYGDDYPTKDGTCIRD 221 Query: 223 WLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 +++V D H+RAL L+K YN+ GN E ++ V E+ K H Sbjct: 222 YIHVMDLADAHIRALDK-LRKDNESAIYNL-GNGEGFSVKEVIEVAR-------KVTGHP 272 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ 310 RPG S KI E+GW P+ Sbjct: 273 IPAEVTGRRPGDPAVLVASSEKITKELGWTPK 304 >gi|85858248|ref|YP_460450.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] gi|85721339|gb|ABC76282.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] Length = 331 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 90/371 (24%), Positives = 162/371 (43%), Gaps = 78/371 (21%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQV-DI 59 MR++VTGGAG+IGS + + L + +L+ D L+ + + L+ L+V ++ Sbjct: 1 MRILVTGGAGYIGSHVVKAL-GEQGHDLLIYDNLSTGHDW--------AVLYGRLEVGEL 51 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + L+ F+P+A+++FAA V+ S+ + N+ + LL+ + Sbjct: 52 ADTRRLDEVLQAFRPEAVLHFAASIQVEESVREPLRYYRNNVANSLNLLD---------A 102 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSD-------------- 165 ++ D + ST VYG ++ E +P NP +PY A+K + Sbjct: 103 MERHDVRNLIYSSTAAVYGIPERMPVDESLPLNPINPYGASKVMMETVLRDIADARENFR 162 Query: 166 YLVLAWGHTYGIPVLLSNCSNNYG-PYHFPEKLIPLAI-TRMIEGSHVFLYG------DG 217 Y+ L + + G ++ N G Y LI A+ T + + ++G DG Sbjct: 163 YIALRYFNVAG-----ADAGNRIGQAYADATHLITRALKTANGQYPKLSVFGTDYPTPDG 217 Query: 218 QNVRDWLYVED----HVRALYLVLKKGRIGERYNIG---GNNERKNIDI---VFEIGFLL 267 +RD+++V+D H+RAL +++ G+ E N G G + R+ +D+ V I F + Sbjct: 218 TCIRDYIHVDDLADAHIRALNYLVETGKT-EIMNCGYGHGFSVREVVDVAKKVTRIDFPV 276 Query: 268 DALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + E R G DSSK++ GW P+ + + + + Sbjct: 277 EE--------------TERRAGDPPELIADSSKLRRLTGWLPRHD-------DLEFIIRT 315 Query: 328 NWWWRPLYKEL 338 W W Y+ L Sbjct: 316 AWDWELKYRSL 326 >gi|299747975|ref|XP_001837374.2| UDP-xylose synthase [Coprinopsis cinerea okayama7#130] gi|298407760|gb|EAU84290.2| UDP-xylose synthase [Coprinopsis cinerea okayama7#130] Length = 418 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 84/341 (24%), Positives = 143/341 (41%), Gaps = 46/341 (13%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-ISQSNLFSFLQVDIC 60 R++VTGGAGF+GS L L+ L +V VID + G+ ++ I N F ++ D+ Sbjct: 97 RILVTGGAGFVGSHLVDRLML-LGHEVTVIDNF-FTGSKTTVSHWIGHPN-FEMVRHDVV 153 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I D I + A + A + I T+ +GT + L Sbjct: 154 EAFMIEC-------DQIYHLACPASPPHYQFNAVKTIKTSFMGTL----------NMLGL 196 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ + RFL ST EVYG + ED P P + Y K ++ L + Sbjct: 197 AKRTKARFLISSTSEVYGDPEVHPQPEDYWGHVNPIGPRACYDEGKRVAETLTYGFHQQD 256 Query: 176 GIPVLLSNCSNNYGPYHFP--EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 G+ V ++ N YGP P +++ I + ++G + +YGDG+ R + Y+ D + + Sbjct: 257 GVDVRVARIFNTYGPRMNPYDGRVVSNFIVQALKGEDMTVYGDGKQTRSFQYIHDLIDGM 316 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR----------F 283 ++ NIG +E + E L+ ++ K + R Sbjct: 317 IALMNSDET-RPVNIGNGDEF----TILEFAELVREIVEKVQDEDGVKRARRVNIVHRPL 371 Query: 284 IEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 +D P R D+++ K + W P+ + GL + V +Y Sbjct: 372 PKDDPQQRRP---DTTRAKESLQWQPRWTIRMGLEEMVRYY 409 >gi|7288226|gb|AAF45032.1|AF146601_1 putative GDP-mannose 4,6-dehydratase [Aeromonas hydrophila] Length = 377 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 141/339 (41%), Gaps = 42/339 (12%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQVD 58 ++TG G GS L +L+ QV I + + N + I Q F D Sbjct: 10 LITGVTGQDGSYLAEFLLEK-GYQVHGIKRRASSFNTQRIDHIYQDPHIEHQNFVLHYGD 68 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD + N A+SHV S + + +GT LLE RL L Sbjct: 69 LTDSSNLTRIIQEVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRL----L 124 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E++G + + E P+ P SPY+ K + ++ + + YG+ Sbjct: 125 GLEKKT--RFYQASTSELFGLVQEIPQRETTPFYPRSPYAVAKLYAYWITVNYCEAYGLY 182 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I + + +G LY G+ ++RDW + +D+V+ + Sbjct: 183 ACNGILFNHESPRRGETFVTRKITRGLANIAQGLDSCLYMGNIDSLRDWGHAKDYVQLQW 242 Query: 235 LVLKKGR-------IGERYNI-----------------GGNNERKNIDIVFEIGFLLDAL 270 L+L++ GE+Y++ G + +V G L A+ Sbjct: 243 LMLQQEEPEDFVIATGEQYSVRQFILWAAEDVGMQLRFEGKGVEEVAVVVSTKGELAPAV 302 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 P R+ RP D+SK + ++GW P Sbjct: 303 RPGDVVLRIDPRYF--RPAEVDSLLGDASKAREKLGWKP 339 >gi|6469141|emb|CAB61752.1| dTDP-glucose 4-6-dehydratase [Cicer arietinum] Length = 346 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 140/324 (43%), Gaps = 34/324 (10%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 MR++VTGGAGFIGS L L+ + K +V+V D + G+ ++LK+ F ++ D+ Sbjct: 33 MRILVTGGAGFIGSHLVDRLMENEKNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVT 91 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + I + D I + A + + I TN+IGT + L Sbjct: 92 EPLMI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----------NMLGL 134 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTY 175 K+ R L ST EVYG + +E P + Y K ++ L+ + + Sbjct: 135 AKRVGARILLTSTSEVYGDPLEHPQTESYWGNVNPNGVRNCYDEGKRVAETLMFDYHRQH 194 Query: 176 GIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRAL 233 GI + ++ N YGP + +++ I + + G + + G R + YV D V L Sbjct: 195 GIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGL 254 Query: 234 YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRR 293 ++ G N+G E +++ + L++ + I+ +E+ P R+ Sbjct: 255 IRLMGGSDTGP-INLGNPGEFTMLELAETVKELINPNVE--------IKTVENTPDDPRQ 305 Query: 294 YAIDSSKIKSEIGWFPQENMESGL 317 D +K K +GW P+ + GL Sbjct: 306 RKPDITKAKELLGWEPKVKLRDGL 329 >gi|311278950|ref|YP_003941181.1| GDP-mannose 4,6-dehydratase [Enterobacter cloacae SCF1] gi|308748145|gb|ADO47897.1| GDP-mannose 4,6-dehydratase [Enterobacter cloacae SCF1] Length = 373 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 16/247 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SN-LFSFLQVD 58 ++TG G GS L L+ +V I + + N + I Q SN F D Sbjct: 6 LITGVTGQDGSYLAELLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTSNPKFHLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + L+E QPD + N A SHV S + + IGT LLE R L Sbjct: 65 LTDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRF----L 120 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 +KK RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 121 GLEKKT--RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I AI + +G LY G+ ++RDW + +D+V+ + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLEKRLYLGNMDSLRDWGHAKDYVKMQW 238 Query: 235 LVLKKGR 241 ++L++ + Sbjct: 239 MMLQQAQ 245 >gi|294673195|ref|YP_003573811.1| CDP-D-glucose-4,6-dehydratase [Prevotella ruminicola 23] gi|294472994|gb|ADE82383.1| CDP-D-glucose-4,6-dehydratase [Prevotella ruminicola 23] Length = 358 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 40/341 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-SLKEISQ--SNLFSFLQVD 58 R+ VTG GF GS LC+ L N I + + A N SL EI++ ++ S + D Sbjct: 13 RVFVTGHTGFKGSWLCKMLANAGAI----VTGYSLAPNTKPSLFEIAELEKDIHSVIG-D 67 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D ++ A + QP+ +++ AA+ V S TN++GT +LE R +C+ Sbjct: 68 IRDYAVLKKAFDKAQPEIVLHLAAQPIVRESYKDPAYTYETNVMGTVNILECVRNS-NCV 126 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGL---FSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 FL ++TD+VY L+K + E+ + PYS +K+ S+ + ++ ++ Sbjct: 127 KS-------FLNVTTDKVY--LNKEWEWGYRENEELDGYDPYSNSKSCSELVTHSYKRSF 177 Query: 176 G--------IPVLLSNCSNNYGPYHFP-EKLIPLAITRMIEGSHVFLYGDGQNVRDWLYV 226 IP+ + N G F +++IP ++ +G + L + + R + +V Sbjct: 178 FTDKDGKAIIPISTARAGNVIGGGDFANDRIIPDSVRAAQKGEDI-LVRNPYSTRPYQHV 236 Query: 227 EDHVRALYLVLKKG----RIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIR 282 + + A ++ K + + YN+G ++ +D F+ G L++ + K + Sbjct: 237 LEPLYAYLMIAAKQYEDCKYADYYNVGPDD----VD-CFQTGALVELFVSKWGEGLKWTN 291 Query: 283 FIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCW 323 + P +D SK+KS GW P+ N+ ++K V W Sbjct: 292 KYDGGPHEANFLKLDCSKLKSTFGWTPRWNLGEAMDKIVEW 332 >gi|163743537|ref|ZP_02150915.1| GDP-D-mannose dehydratase, NAD(P)-binding [Phaeobacter gallaeciensis 2.10] gi|161383240|gb|EDQ07631.1| GDP-D-mannose dehydratase, NAD(P)-binding [Phaeobacter gallaeciensis 2.10] Length = 369 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 85/346 (24%), Positives = 137/346 (39%), Gaps = 42/346 (12%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQS-----NLFSFLQ 56 + ++TG G GS L +L+ +V + + + N + I Q F Sbjct: 3 KALITGVTGQDGSYLAEFLLEK-GYEVHGLKRRASSFNTQRVDHIYQDPHTDHARFKLHY 61 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 D+ D + L E +PD + N A+SHV S + + IGT LLE R Sbjct: 62 GDLTDTSNLTRLLSEIEPDEVYNLGAQSHVAVSFEAPEYTADVDGIGTLRLLEAIRF--- 118 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYG 176 L +KK RF Q ST E+YG + + E P+ P SPY+ K S ++ + + YG Sbjct: 119 -LGLEKKT--RFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKLYSYWITVNYREAYG 175 Query: 177 IPVLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRA 232 I N+ P F + I + + +G LY G+ +RDW + D+VR Sbjct: 176 IYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEECLYMGNIDALRDWGHARDYVRM 235 Query: 233 LYLVLKKGRIGERYNIGGNNERKNIDIVF----EIGFLLDALIPKSYSHTELIRFIED-- 286 +++L++ + E + I + + E+G L A + + IE Sbjct: 236 QWMMLQQ-EVPEDFVIATGKQYSVRQFITWSAQELGLTL-AFSGEGVEEIATVTAIEGDM 293 Query: 287 ------------------RPGHDRRYAIDSSKIKSEIGWFPQENME 314 RP D +K K ++GW P+ E Sbjct: 294 APALKVGDVVLRIDPRYFRPAEVETLLGDPTKAKQKLGWVPEITTE 339 >gi|254825401|ref|ZP_05230402.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-194] gi|293594644|gb|EFG02405.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-194] Length = 327 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 91/333 (27%), Positives = 146/333 (43%), Gaps = 53/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M + V GGAG+IGS L+ +V+VID NL + + S F + DI Sbjct: 1 MGIAVLGGAGYIGSHAVDELITR-GYEVVVID------NLRTGHKESIHTKAKFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + D +++FAA S V S+ ++ N+ GT I+LE Sbjct: 54 DKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVM--------- 104 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +QF I S+ YG ++ +EDMP NP S Y TK + ++ Y + Sbjct: 105 ---EQFGVKHIVFSSSAATYGESERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEK-LIPLAITRMI-EGSHVFLYG------DGQNVR 221 V + + G H PE L+P+ + + + + +YG DG +R Sbjct: 162 KYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIR 221 Query: 222 DWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSH 277 D++ VED H++AL LK G +N+G +N F + +L+A ++ + Sbjct: 222 DYVQVEDLIDAHIKALEY-LKNGGESNIFNLGSSNG-------FSVKEMLEA--ARTVTG 271 Query: 278 TELIRFIEDRPGHDRRYAIDSSKIKSEI-GWFP 309 E+ + R D I SS EI GW P Sbjct: 272 KEIPAEVVPRRAGDPGTLIASSDKAREILGWEP 304 >gi|167461789|ref|ZP_02326878.1| UDP-2-acetamido-2,6-dideoxy-hexulose 4-reductase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382713|ref|ZP_08056565.1| CDP-sugar-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153322|gb|EFX45758.1| CDP-sugar-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 301 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 122/302 (40%), Gaps = 60/302 (19%) Query: 3 LIVTGGAGFIGSALCRYL-VNDLKIQVLVIDKL-------TYAGNLNSLKEISQSNLFSF 54 +++TG GF G C+Y K+ L+ + T G+LN Sbjct: 5 ILITGANGFSGRHACKYFNSQGYKVTGLIRGPVEEGLPWFTVTGDLN------------- 51 Query: 55 LQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLW 114 E I+S ++ +PD +++ A ++ V S + + +N++GT LL+ R++ Sbjct: 52 ------HPEQIQSIIQRVRPDYVLHLAGKNSVAESWVQPAHYFESNVLGTINLLDALRVF 105 Query: 115 WSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT 174 SC + RF +++ D P+ PY+ +K + AW H Sbjct: 106 PSCRTLIVGSMLRF-EVTEDPA----------------PAHPYALSKTLQQFTAKAWRHL 148 Query: 175 YGIPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSH--VFLYGDGQNVRDWLYVEDHV 230 + +LL SN GP L+ AI + G F RD+L V D V Sbjct: 149 FHQKILLGEPSNLIGPGFSTGICGLLARAIAKFERGEENKPFRLSSSTEERDYLDVRDAV 208 Query: 231 RALYLVLKKGRIGERYNIGGNNERKNIDIV------------FEIGFLLDALIPKSYSHT 278 A ++L+KG+ GE Y+IG R +IV EIG L A IP+ S Sbjct: 209 SAYAVILEKGKDGETYSIGSGVLRSLGEIVAAFSQMVPRMLPLEIGDALQAEIPQPVSAQ 268 Query: 279 EL 280 L Sbjct: 269 PL 270 >gi|149004337|ref|ZP_01829097.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP14-BS69] gi|149021293|ref|ZP_01835539.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP23-BS72] gi|168486871|ref|ZP_02711379.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|168487306|ref|ZP_02711814.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|168487590|ref|ZP_02712098.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|168491504|ref|ZP_02715647.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC0288-04] gi|168493515|ref|ZP_02717658.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC3059-06] gi|169833103|ref|YP_001695005.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae Hungary19A-6] gi|237649233|ref|ZP_04523485.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CCRI 1974] gi|237822084|ref|ZP_04597929.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CCRI 1974M2] gi|147757714|gb|EDK64730.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP14-BS69] gi|147930394|gb|EDK81378.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae SP23-BS72] gi|168995605|gb|ACA36217.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae Hungary19A-6] gi|183569615|gb|EDT90143.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|183569837|gb|EDT90365.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|183570202|gb|EDT90730.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC1087-00] gi|183574129|gb|EDT94657.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC0288-04] gi|183576431|gb|EDT96959.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae CDC3059-06] gi|332201045|gb|EGJ15116.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae GA47901] Length = 339 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 58/358 (16%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSN--LFSFLQVDI 59 +++VTGGAGFIG+ L+ QV+V+D L + N SL+ + + F + DI Sbjct: 4 KILVTGGAGFIGTHTVIELIQ-AGHQVVVVDNLVNS-NRKSLEVVERITGVEIPFYEADI 61 Query: 60 CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLS 119 D + +R K+ +P +++FA V S + NI GT LL+ + Sbjct: 62 RDTDTLRDIFKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLK---------A 112 Query: 120 QDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATK------------ASSDYL 167 ++ + + S+ VYG ED P + ++PY TK A S++ Sbjct: 113 MEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWN 172 Query: 168 VLAWGHTYGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--SHVFLYGD------G 217 V+ Y P+ ++ S + G P P L+P +T++ G V ++GD G Sbjct: 173 VVLL--RYFNPIG-AHESGDLGENPNGIPNNLLPY-VTQVAVGKLEQVQVFGDDYDTEDG 228 Query: 218 QNVRDWLYVEDHVRALYLVLKKGRIGER---YNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D + LKK + G YN+G ++I+ + + IP Sbjct: 229 TGVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGRPIP-- 286 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDNNWWWR 332 R +E RPG D +K K+E+GW E+ L+ + ++ W W+ Sbjct: 287 ------YRIVERRPGDIAACYSDPAKAKAELGW------EAELD--ITQMCEDAWRWQ 330 >gi|116249844|ref|YP_765682.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) [Rhizobium leguminosarum bv. viciae 3841] gi|115254492|emb|CAK05566.1| putative UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) [Rhizobium leguminosarum bv. viciae 3841] Length = 327 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 86/328 (26%), Positives = 143/328 (43%), Gaps = 48/328 (14%) Query: 3 LIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 ++VTGGAGFIGS +C+ L I V D L+ G+ +S++ ++ ++ D Sbjct: 5 ILVTGGAGFIGSHICKALSRAGMIPV-TYDNLS-TGHADSVR------WGPLIRAELADA 56 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 +R L EF PD +++ A ++V S+ ++ N++G+ LLE +CL QD Sbjct: 57 AALRRTLAEFSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLE------ACLDQDI 110 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 R + S+ YG E+ P +P +PY TK + + + YGI Sbjct: 111 D---RIVFSSSCATYGVPASLPIREESPQHPVNPYGRTKLIFEMALEDFAAAYGIRFAAL 167 Query: 183 NCSNNYGP--------YHFPEK-LIP---LAITRMIEGSHVF----LYGDGQNVRDWLYV 226 N G H PE LIP LA +E +F DG VRD+++V Sbjct: 168 RYFNAAGADPDGELAERHQPETHLIPRALLAAAGRLERLDIFGTDYATEDGTCVRDYIHV 227 Query: 227 ED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI 281 D H+ A+ +L+ G + G + I L+A I ++ + Sbjct: 228 SDLAQAHLAAVNHLLADGGSLSVNLGSGRGTSVREI---------LEA-IHRASGREVPV 277 Query: 282 RFIEDRPGHDRRYAIDSSKIKSEIGWFP 309 R+ R G ++++ K+E+G+ P Sbjct: 278 RYRSRRVGDPPILFANTARAKAELGFAP 305 >gi|320169571|gb|EFW46470.1| UDP-glucuronic acid decarboxylase 1 [Capsaspora owczarzaki ATCC 30864] Length = 460 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 35/330 (10%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 +++VTGGAGF+GS L L+ +V V+D Y G +++ F + D+ Sbjct: 91 KILVTGGAGFVGSHLVDALMAQGH-EVTVVDNF-YTGRRQNIEHWVGHPNFQLIVHDV-- 146 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 +E I Q D I + A+ + + I TN +GT +L R Sbjct: 147 QEPIF-----LQVDQIYHLASPASPPHYQHNPIKTIKTNAVGTLNMLGLAR--------- 192 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 + + FL ST EVYG + E P P + Y K ++ + +A+ Sbjct: 193 -RVKAEFLLASTSEVYGDPEVHPQPESYWGHVNPIGPRACYDEGKRVAETMAVAYQQQEQ 251 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N +GP P +++ I + ++G + +YG+GQ R + YV D V L Sbjct: 252 VSIHIARIFNTFGPRMHPNDGRVVSNFIIQALQGKPITIYGEGQQTRSFQYVSDLVSGL- 310 Query: 235 LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRY 294 + L + N+G +E +D F+ D + + I F+ +R Sbjct: 311 MKLMNSNVSVPVNLGNPDEYSILDFAT---FVRDEV-----ASDAAIAFMPASRDDPQRR 362 Query: 295 AIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 D + + +GW PQ + G++KT+ ++ Sbjct: 363 KPDILRAEQLLGWTPQVPVREGIHKTIEYF 392 >gi|283457671|ref|YP_003362256.1| UDP-glucose 4-epimerase [Rothia mucilaginosa DY-18] gi|283133671|dbj|BAI64436.1| UDP-glucose 4-epimerase [Rothia mucilaginosa DY-18] Length = 385 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 44/351 (12%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGGAG+IGS L+ V+V+D L + SLK +++ F +VD Sbjct: 49 MKVLVTGGAGYIGSHTVLELLK-AGHDVVVMDNLANSSE-ESLKRVAELAGRAPEFHKVD 106 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D E +++ K+ +PDA+++FA V S + TN+ GT LL Sbjct: 107 LLDLEGMKALFKQVRPDAVIHFAGLKAVGESAEKPLWYYQTNVAGTLNLL---------Y 157 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKAS-SDYLV--LAWGHTY 175 + D+ D + S+ VYG + E M + S Y TK D LV A + Sbjct: 158 AMDEADCHSIVFSSSATVYGEPESMPLIEKMNMDAQSCYGRTKEHIEDMLVDLAASDSKW 217 Query: 176 GIPVLL------SNCSNNYG--PYHFPEKLIP-LAITRMIEGSHVFLYG------DGQNV 220 I +L ++ S G P P L+P +A + H+ ++G DG V Sbjct: 218 NIALLRYFNPVGAHESGRIGEDPAGIPNNLVPFIAQVAVGRREHLNVFGNDYPTVDGTGV 277 Query: 221 RDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYS 276 RD+++V D H++AL + + G + +N+G N + ++ +P Sbjct: 278 RDYIHVVDLADGHLKALNYITEHGGL-HTWNLGTGNGYSVLQVLHAFEEACGKELP---- 332 Query: 277 HTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + ++ RPG D S +++GW ++++ + W +N Sbjct: 333 ----YKIVDRRPGDVAVSYADPSSALADLGWSASRDIKTMIRDHWNWQKNN 379 >gi|15601529|ref|NP_233160.1| UDP-glucose 4-epimerase [Vibrio cholerae O1 biovar eltor str. N16961] gi|121590871|ref|ZP_01678195.1| UDP-glucose 4-epimerase [Vibrio cholerae 2740-80] gi|121728645|ref|ZP_01681663.1| UDP-glucose 4-epimerase [Vibrio cholerae V52] gi|153818666|ref|ZP_01971333.1| UDP-glucose 4-epimerase [Vibrio cholerae NCTC 8457] gi|153820751|ref|ZP_01973418.1| UDP-glucose 4-epimerase [Vibrio cholerae B33] gi|227812341|ref|YP_002812351.1| UDP-glucose 4-epimerase [Vibrio cholerae M66-2] gi|229506069|ref|ZP_04395578.1| UDP-glucose 4-epimerase [Vibrio cholerae BX 330286] gi|229510074|ref|ZP_04399554.1| UDP-glucose 4-epimerase [Vibrio cholerae B33] gi|229516367|ref|ZP_04405814.1| UDP-glucose 4-epimerase [Vibrio cholerae RC9] gi|229605601|ref|YP_002876305.1| UDP-glucose 4-epimerase [Vibrio cholerae MJ-1236] gi|254849933|ref|ZP_05239283.1| UDP-glucose 4-epimerase [Vibrio cholerae MO10] gi|255746467|ref|ZP_05420414.1| UDP-glucose 4-epimerase [Vibrio cholera CIRS 101] gi|262152363|ref|ZP_06028496.1| UDP-glucose 4-epimerase [Vibrio cholerae INDRE 91/1] gi|298499567|ref|ZP_07009373.1| UDP-glucose 4-epimerase [Vibrio cholerae MAK 757] gi|9658197|gb|AAF96672.1| UDP-glucose 4-epimerase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547278|gb|EAX57399.1| UDP-glucose 4-epimerase [Vibrio cholerae 2740-80] gi|121629056|gb|EAX61502.1| UDP-glucose 4-epimerase [Vibrio cholerae V52] gi|126510819|gb|EAZ73413.1| UDP-glucose 4-epimerase [Vibrio cholerae NCTC 8457] gi|126521794|gb|EAZ79017.1| UDP-glucose 4-epimerase [Vibrio cholerae B33] gi|227011483|gb|ACP07694.1| UDP-glucose 4-epimerase [Vibrio cholerae M66-2] gi|229346248|gb|EEO11219.1| UDP-glucose 4-epimerase [Vibrio cholerae RC9] gi|229352519|gb|EEO17459.1| UDP-glucose 4-epimerase [Vibrio cholerae B33] gi|229356420|gb|EEO21338.1| UDP-glucose 4-epimerase [Vibrio cholerae BX 330286] gi|229372087|gb|ACQ62509.1| UDP-glucose 4-epimerase [Vibrio cholerae MJ-1236] gi|254845638|gb|EET24052.1| UDP-glucose 4-epimerase [Vibrio cholerae MO10] gi|255736221|gb|EET91619.1| UDP-glucose 4-epimerase [Vibrio cholera CIRS 101] gi|262030814|gb|EEY49445.1| UDP-glucose 4-epimerase [Vibrio cholerae INDRE 91/1] gi|297541548|gb|EFH77599.1| UDP-glucose 4-epimerase [Vibrio cholerae MAK 757] gi|327485779|gb|AEA80185.1| UDP-glucose 4-epimerase [Vibrio cholerae LMA3894-4] Length = 338 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/356 (24%), Positives = 147/356 (41%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ--SNLFSFLQVD 58 M+++VTGG G+IGS C ++ + +++D L Y + L I + F+Q D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQ-AGMTPVILDNL-YNSKVTVLDRIEKVIGVRPQFVQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + +++ +A+V+FA V S+ E+ N+ GT +L+ R Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG +E P ++PY +K + + W Sbjct: 113 ---EAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ S G P P L+P +T++ G +L +G DG Sbjct: 170 SITLLRYFNPV-GSHPSGELGEDPQGIPNNLMPF-VTQVAVGRREYLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVEDHVRALYLVLKKGRIG-----ERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D LKK +G YN+G +D+V FE Sbjct: 228 GVRDYIHVMDLADGHIAALKK--VGTCAGLHIYNLGTGKGYSVLDVVKAFET-------- 277 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + T + ++ RPG Y D +K ++GW N+ + CW +N Sbjct: 278 --ASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSNN 331 >gi|326432677|gb|EGD78247.1| NAD-dependent epimerase/dehydratase [Salpingoeca sp. ATCC 50818] Length = 413 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 37/336 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNS-----LKEISQSNLFS--- 53 R++VTGG GFIG L LV L V+V+D N NS LKE LF Sbjct: 67 RVLVTGGVGFIGFHLAATLVQ-LGNDVVVLD------NFNSYYDVRLKEARAHKLFGHGV 119 Query: 54 -FLQVDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETR 112 + DICD + ++ + + AA++ V S+ ++I +N+ +LEE R Sbjct: 120 RVVNGDICDFRLLEKLFEQHGFTHVAHLAAQAGVRYSVNHPHDYIRSNVDCFVNILEELR 179 Query: 113 LWWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSE-DMPYNPSSPYSATKASSDYLVLAW 171 K + + + S+ VYG F+E + P++ Y ATK ++ L ++ Sbjct: 180 ---------TKPEVKLVYASSSSVYGKDATIPFTEKECSDKPTNVYGATKRMNELLAHSY 230 Query: 172 GHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY--GDGQNV-RDWLYVED 228 H Y I +GP+ P+ + R++ G + +Y DG+ + RD+ YV+D Sbjct: 231 HHLYNISATGLRFFTVFGPWGRPDMAPFIFTERVMRGDTIDVYHTADGEEMRRDFTYVDD 290 Query: 229 HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRP 288 V + L G + +N+G R + V + ++++ K ++ + P Sbjct: 291 IVDGIVRSLHHGAGYDVFNLG----RGHPTSVPQFIEMIESATGKPARRNDMEAHAAELP 346 Query: 289 GHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 YA D S + + P+ + G+N V WY Sbjct: 347 ---ETYA-DVSHAADVLDYSPKMATDEGVNAFVGWY 378 >gi|312116336|ref|YP_004013932.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311221465|gb|ADP72833.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 318 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS L L+ D +VL +D L + G ++ + F F++ D+ Sbjct: 10 RVLVTGGAGFLGSHLIDRLLADGH-EVLCVDNL-FTGTKRNIDHLHGQPRFEFMRHDV-- 65 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T++ G + L Sbjct: 66 -----TLPLYVEVDEIYNLACPASPVHYQHDPVQTTKTSVHGAI----------NMLGLA 110 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + R LQ ST EVYG ED P P S Y K ++ L + + Sbjct: 111 KRLKCRILQASTSEVYGDPAVHPQREDYWGNVNPIGPRSCYDEGKRCAETLFFDYNRQHQ 170 Query: 177 IPVLLSNCSNNYGP--YHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + ++ N YGP + +++ I + + + LYGDG+ R + YV+D + L Sbjct: 171 LDIKVARIFNTYGPRMHRADGRVVSNFIVQALTNEPITLYGDGRQTRSFCYVDDLIDGLV 230 Query: 235 LVL--KKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD- 291 ++ G IG N+G E +++ E+ + ++ S +E++ P D Sbjct: 231 RLMNSPAGFIGP-VNLGNPGEFSMLELAREV-------VRQTDSASEIV--YRPLPADDP 280 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 ++ D + ++++GW P+ + GL T+ ++ Sbjct: 281 KQRQPDIALAQAKLGWQPEVPLSEGLKPTIAYF 313 >gi|23016895|ref|ZP_00056647.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 299 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 34/322 (10%) Query: 4 IVTGGAGFIGS-ALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDR 62 +VTG AGF+GS + L +++ L + + +L +L + +L +DI Sbjct: 7 LVTGAAGFLGSHTIEALLAQGHRVRGLDLPGARFEDSLGALLDHPGLSLDKRDLLDIPAD 66 Query: 63 ECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + I + + D I + A + S+ + ++ N++ +LE R Sbjct: 67 DPIFAGV-----DVIYHCAGIADHVPSLQVPERYMQANVMAVVRVLEAAR---------H 112 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 + + S+ VYG + +ED P NP +PY TK ++ W +G+ L Sbjct: 113 HKVRKVINASSAAVYG-IAAAPTAEDHPINPVNPYGLTKWMAEEACAHWSKVFGVATLSF 171 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKKGRI 242 N YGP I + + G + + GDG RD+++V D V A + Sbjct: 172 RIFNCYGPRATASGPIGFFLKKAAAGEALTVTGDGTQERDFIHVSDVVAAFLAGAASEKS 231 Query: 243 GERYNIG-GNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHDRRYAIDSSKI 301 YN+G G E N L L+ + I +I RPG + D+++I Sbjct: 232 SAAYNLGSGRPETVN---------RLAELVGGA------ITYIPARPGEPKVILADTTRI 276 Query: 302 KSEIGWFPQENMESGLN--KTV 321 ++E+GW P+ ++ +G+ KTV Sbjct: 277 RAELGWEPKVSLAAGIAALKTV 298 >gi|51595359|ref|YP_069550.1| GDP-D-mannose dehydratase [Yersinia pseudotuberculosis IP 32953] gi|153950334|ref|YP_001402001.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|170025400|ref|YP_001721905.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|6580724|emb|CAB63300.1| GDP-mannose-4,6-dehydratase [Yersinia pseudotuberculosis str. PA3606] gi|51588641|emb|CAH20249.1| GDP-D-mannose dehydratase [Yersinia pseudotuberculosis IP 32953] gi|152961829|gb|ABS49290.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|169751934|gb|ACA69452.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|298161997|gb|ADI59447.1| GDP-mannose 4,6-dehydratase [Yersinia pseudotuberculosis] Length = 373 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 16/247 (6%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQ----SNLFSFLQV-D 58 ++TG G GS L +L+ + +V I + + N + + I Q +N FL D Sbjct: 6 LITGITGQDGSYLAEFLL-EKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHYGD 64 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D + ++E QPD I N A+SHV S + + +GT LLE R+ Sbjct: 65 LTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRI----- 119 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + RF Q ST E+YG + + E P+ P SPY+ K + ++ + + +YG+ Sbjct: 120 -NGLEKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMY 178 Query: 179 VLLSNCSNNYGPYH---FPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRALY 234 N+ P F + I A+ + G LY G+ ++RDW + +D+VR + Sbjct: 179 ACNGILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQW 238 Query: 235 LVLKKGR 241 ++L++ + Sbjct: 239 MMLQQDK 245 >gi|332522914|ref|ZP_08399166.1| UDP-glucose 4-epimerase [Streptococcus porcinus str. Jelinkova 176] gi|332314178|gb|EGJ27163.1| UDP-glucose 4-epimerase [Streptococcus porcinus str. Jelinkova 176] Length = 332 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 151/347 (43%), Gaps = 48/347 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + +LV + +V+V+D L G+ ++ + SF Q D+ Sbjct: 1 MAILVLGGAGYIGSHMVDWLVERSEEKVVVVDNLA-TGHRQAIHPKA-----SFYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D+ +R +E P DA+++FAA S V S+ ++ N +G LLE + C Sbjct: 55 DQTFMRQVFRE-NPDIDAVIHFAAYSLVGESMTDPLKYFDNNTVGMVKLLE---VMAECG 110 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIP 178 + + + ST YG ++ E NP +PY +K + ++ YGI Sbjct: 111 VK------KIVFSSTAATYGIPEEIPIKETSLQNPINPYGESKLMMEKIMDWCDQAYGIH 164 Query: 179 --------VLLSNCSNNYGPYHFPE-KLIPLAITRMIEGSH--VFLYG------DGQNVR 221 V + G H+PE LIPL + ++ G + ++G DG N+R Sbjct: 165 FVALRYFNVAGDKPDGSIGEDHYPETHLIPL-VLQVANGQREKIMIFGDDYATEDGTNIR 223 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D+++ D +A L L+ G +N+G + N+ I+ + IP Sbjct: 224 DYVHPLDLAQAHCLAVDYLRAGSPSTAFNLGSSTGFSNLQILEVARKVTGKDIPAEIGAR 283 Query: 279 ELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 R G DS+K + +GW P +++E + W+ Sbjct: 284 --------RQGDPDVLVADSAKAREILGWKPAYDDIEKIIETAWAWH 322 >gi|171318696|ref|ZP_02907839.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5] gi|171096102|gb|EDT41028.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5] Length = 316 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 39/333 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R++VTGGAGF+GS LC LV +L VL +D + G ++ + + F L+ D+ Sbjct: 7 RILVTGGAGFLGSHLCERLV-ELGHDVLCVDNY-FTGTKQNVAALLGNPRFEALRHDV-- 62 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + T+++G + L Sbjct: 63 -----TFPLYVEVDEIYNLACPASPIHYQFDPVQTTKTSVMGAI----------NMLGLA 107 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ R LQ ST EVYG D E P P + Y K ++ L + Sbjct: 108 KRTHARVLQTSTSEVYGDPDVHPQPESYRGNVNPLGPRACYDEGKRCAETLFFDYHRQQN 167 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 + + + N YGP P +++ I + + G ++ LYGDG R + YV+D V L Sbjct: 168 VRIKVVRIFNTYGPRMHPNDGRVVSNFIVQALRGENITLYGDGSQTRAFCYVDDMVDGLI 227 Query: 235 -LVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELI--RFIEDRPGHD 291 ++ + N+G +E I L ++ + S + L+ +D P Sbjct: 228 RMMASPADLTGPINLGNPHE-------IAISELAQIVLRLTGSTSRLVFRPLPKDDP--- 277 Query: 292 RRYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D ++ + W P +E+GL +T+ ++ Sbjct: 278 TQRCPDIGLARAHLDWAPTVGLEAGLRRTIDYF 310 >gi|15897116|ref|NP_341721.1| UDP-glucose 4-epimerase (galE-2) [Sulfolobus solfataricus P2] gi|284174357|ref|ZP_06388326.1| UDP-glucose 4-epimerase (galE-2) [Sulfolobus solfataricus 98/2] gi|13813295|gb|AAK40511.1| UDP-glucose 4-epimerase (galE-2) [Sulfolobus solfataricus P2] gi|261601778|gb|ACX91381.1| NAD-dependent epimerase/dehydratase [Sulfolobus solfataricus 98/2] Length = 311 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/313 (25%), Positives = 147/313 (46%), Gaps = 32/313 (10%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICDRE 63 IVTGGAG+IG L YL++ ++V+VID L+Y N + F+ D+ R+ Sbjct: 3 IVTGGAGYIGGHLVDYLISK-NLEVIVIDDLSYGKYRNEKAK--------FVMFDL--RQ 51 Query: 64 CIRSALKEFQPDAIV-NFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQDK 122 + +++ + + I+ + AA V S++ +E ++ T ++E R + Sbjct: 52 NMGELVEKLEKNPIIYHLAANPDVRTSMINVEEHFERDVKVTLNVMELAR---------R 102 Query: 123 KDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVLLS 182 D + + S+ VYG K E P S Y K + +V + YGI + + Sbjct: 103 VDAEKVIFTSSSTVYGETSKIPTPESEELKPISNYGLFKLLCENIVKYYAEQYGIKSIST 162 Query: 183 NCSNNYGPYHFPEKLIPLAITRMIEGSHVF-LYGDGQNVRDWLYVEDHVRALYLVLKK-G 240 +N G ++ I ++ + ++ + G+G+ + +LY++D + A ++ KK Sbjct: 163 RLANITGG-RVSHGVVIDFIKKLKDNPNLLEILGNGKQRKSYLYIDDLIEAFVMLEKKVN 221 Query: 241 RIGERYNIGGNNERKNIDIVFEIGFLLDALIPK-SYSHTELIRFIEDR--PGHDRRYAID 297 RI + +NI GNN+ +D + +I L P+ +Y + + R PG R +D Sbjct: 222 RIYDVFNI-GNNDSITVDEIAKIVIDEMKLSPRITYKNPTA----DGRGWPGDVRLMLLD 276 Query: 298 SSKIKSEIGWFPQ 310 SKI E+GW P+ Sbjct: 277 ISKISREVGWSPK 289 >gi|256827945|ref|YP_003156673.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256577121|gb|ACU88257.1| NAD-dependent epimerase/dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 322 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 37/332 (11%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+++TGG+GF+GS LC L+ D +V+ +D + + +++ + + F ++ D+ Sbjct: 6 RVLITGGSGFLGSHLCERLL-DEGCEVICVDNF-FTSSRQNIEHLLPNPRFELIRHDV-- 61 Query: 62 RECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQD 121 + + D I N A + + I T + G + L Sbjct: 62 -----TFPLYLEVDEIYNLACPASPIHYQHDPVQTIKTCVHGAI----------NMLGLA 106 Query: 122 KKDQFRFLQISTDEVYGSLDKGLFSEDM-----PYNPSSPYSATKASSDYLVLAWGHTYG 176 K+ + Q ST EVYG D E P S Y K ++ L A+ +G Sbjct: 107 KRLRIPIFQASTSEVYGDPDVHPQPESYWGNVNPIGHRSCYDEGKRCAESLFFAYHRQHG 166 Query: 177 IPVLLSNCSNNYGPYHFPE--KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALY 234 +P+ + N YGP P +++ I + ++G + +YGDG R + YV+D V + Sbjct: 167 LPIKVGRLFNTYGPRMHPNDGRVVSNFIMQALQGKPITIYGDGSQTRSFCYVDDLVELML 226 Query: 235 LVLKKGR-IGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIEDRPGHD-R 292 ++ N+G E F I L +I + S +++ +E P D + Sbjct: 227 RFMRNDHEFCGPLNMGNPGE-------FTILELAQQVIEMTGSSSKIS--LEPLPTDDPK 277 Query: 293 RYAIDSSKIKSEIGWFPQENMESGLNKTVCWY 324 + D + + GW PQ + GL +T+ ++ Sbjct: 278 QRKPDITLARERYGWEPQVGLREGLVQTIAYF 309 >gi|156977008|ref|YP_001447914.1| UDP-glucose 4-epimerase [Vibrio harveyi ATCC BAA-1116] gi|156528602|gb|ABU73687.1| hypothetical protein VIBHAR_05793 [Vibrio harveyi ATCC BAA-1116] Length = 338 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 151/353 (42%), Gaps = 48/353 (13%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFS--FLQVD 58 M+++VTGG G+IGS C ++ + + +++D L Y L+ I + F++ D Sbjct: 1 MKVLVTGGMGYIGSHTCIQMI-EAGMTPVILDNL-YNSKPTVLERIEKVCGVKPVFIEAD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I D+ + A+K +A+++FA V S+ E+ N+ GT +L++ R Sbjct: 59 IRDKAALVDAMKAHNIEAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMR------ 112 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVL-------AW 171 + + S+ VYG ED P + ++PY +K + + W Sbjct: 113 ---EAGVKSIVFSSSATVYGDPASVPIMEDFPTSATNPYGRSKLMVEECLTDFQKANPDW 169 Query: 172 GHT---YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEGSHVFL--YG------DGQ 218 T Y PV S+ + G P P L+P ++++ G FL +G DG Sbjct: 170 SITLLRYFNPV-GSHPTGELGEDPQGIPNNLMPF-VSQVAVGRREFLSVFGSDYPTKDGT 227 Query: 219 NVRDWLYVED----HVRALYLVLKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKS 274 VRD+++V D HV AL V K + YN+G N +++V +P Sbjct: 228 GVRDYIHVMDLSDGHVAALDKVGNKAGL-HIYNLGTGNGYSVLEMVKAFEAASGKEVP-- 284 Query: 275 YSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 + ++ RPG D SK +E+GW +E + T W +N Sbjct: 285 ------FKLVDRRPGDIAECWADPSKAANELGWKSVRTLEEMTSDTWRWQSNN 331 >gi|126727009|ref|ZP_01742847.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium HTCC2150] gi|126703681|gb|EBA02776.1| NAD-dependent epimerase/dehydratase [Rhodobacterales bacterium HTCC2150] Length = 340 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 82/356 (23%), Positives = 163/356 (45%), Gaps = 56/356 (15%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKE-----ISQSNLFSFLQ 56 ++++TG AGFIG L + ++ D V+ D ++ ++ +LKE + Q+ F Sbjct: 6 KILITGTAGFIGFHLAQVML-DQGWLVVGYDGMSDYYDV-TLKERRHQMLLQNAGFKCEI 63 Query: 57 VDICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWS 116 + D + + + + +PD IV+ A ++ V S+ +I +NI+GTF ++E Sbjct: 64 GQLEDFDQLHALMMREKPDVIVHLAGQAGVRYSLENPRAYIESNIVGTFNVME------- 116 Query: 117 CLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPS-------SPYSATKASSDYLVL 169 C + D L ST YGS + +MPY + + Y+ATK +++ + Sbjct: 117 CARELGVDHL--LMASTSSAYGS------NTEMPYAETHKADSQLTIYAATKKANEAMGH 168 Query: 170 AWGHTYGIPVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 ++ H + +P + YGP+ P+ + +IEG+ + +Y G+ RD+ YV D Sbjct: 169 SYAHLWNLPTTMFRFFTVYGPWGRPDMALFKFTKGIIEGTPIDIYNHGEMFRDFTYVTDL 228 Query: 230 VRALYLVL--------KKGRIGER-----------YNIGGNNERKNIDIVFEIGFLLDAL 270 V+ + L++ + I E NIG +++ + +D V I + L Sbjct: 229 VKGISLLVDTPPVRPASEDDIAEGDSLSASAPFRVVNIGNSDKVRLLDFVDAIEAEIGIL 288 Query: 271 IPKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLD 326 ++Y ++ + G ++ +++ G+ P+ ++ +G+ V WY D Sbjct: 289 AKRNY--------MDMQKGDVPATWANADLLQNLTGYKPETDVRAGVANFVAWYRD 336 >gi|159041127|ref|YP_001540379.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157919962|gb|ABW01389.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 325 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 33/337 (9%) Query: 2 RLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDICD 61 R+IVTGGAGFIGS L LV D +V V+D + +G++++LKE + + ++ D+ Sbjct: 9 RVIVTGGAGFIGSHLVDRLVRD-GYEVTVLDNFS-SGDVSNLKESLSTGRVNVVKADL-- 64 Query: 62 RECIRSALKEFQPD-AIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 + + EF+ A+ + AA V S + N++ TF + E R+ Sbjct: 65 -KYWGDWVSEFKGAYAVFHLAANPEVRVSSVEPRSHFDNNLVATFNVAEAARV------- 116 Query: 121 DKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGIPVL 180 D + S+ VYG ED P P S Y ATKA+ + ++ + YGI V+ Sbjct: 117 --SDVKYIVFASSSTVYGDAKVLPTPEDHPIIPISVYGATKAAGEIILDTYSRLYGIRVV 174 Query: 181 LSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDHVRALYLVLKK- 239 +N GP + I + + GDG + +LYV+D V A + K Sbjct: 175 NLRYANIVGPRSRHGVIYDFYIKLTRNPRELEVLGDGSQRKSYLYVDDAVDASLFLFNKL 234 Query: 240 --GRIGER-YNIGGNNERKNIDI----VFEIGFLLDALIPKSYSHTELIRFIEDRPG--H 290 G + E+ +N+G + +DI + E+G ++ ++ + D G Sbjct: 235 INGSLQEQAFNVGNKDWVTVMDIARIVIEELGLRNVNIVTRAMT--------PDGRGWLG 286 Query: 291 DRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 D +Y + S++GW P+ + + T+ W N Sbjct: 287 DVKYMLLDVDKLSKLGWSPRYSSADAVRLTIRWLKGN 323 >gi|146292486|ref|YP_001182910.1| UDP-glucose 4-epimerase [Shewanella putrefaciens CN-32] gi|145564176|gb|ABP75111.1| UDP-galactose 4-epimerase [Shewanella putrefaciens CN-32] Length = 337 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 54/356 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAG--NLNSLKEISQSNLFSFLQVD 58 M ++VTGGAG+IG+ L+ +V+V+D L+ + LN ++ I+ ++ +F Q D Sbjct: 1 MTILVTGGAGYIGTHTVVELLK-AGSEVIVLDNLSNSSIEALNRVERITGKSV-TFYQGD 58 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 I ++ ++ + D++++FA V S+ ++ N+ GT +L + + Sbjct: 59 ILNKALLQKVFSDHAIDSVIHFAGLKAVGESVAKPLKYYENNVTGTLVLCQ-------VM 111 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHT---- 174 ++ K F +T VYG +ED P ++PY +K ++++ H+ Sbjct: 112 AEFKVKNLVFSSSAT--VYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSW 169 Query: 175 ------YGIPVLLSNCSNNYG--PYHFPEKLIPLAITRMIEG--------SHVFLYGDGQ 218 Y PV ++ S G P P L+P I ++ G H + DG Sbjct: 170 NIARLRYFNPV-GAHSSGLIGEDPNDIPNNLMPF-IAQVAVGKRAVLSVFGHDYPTHDGT 227 Query: 219 NVRDWLYVED----HVRAL-YLVLKKGRIGERYNIGGNNERKNIDIV--FEIGFLLDALI 271 VRD+++V D H++AL L + G + YN+G +D+V FE Sbjct: 228 GVRDYIHVVDLAKGHLKALEKLATRPGLV--TYNLGTGQGYSVLDMVKAFE--------- 276 Query: 272 PKSYSHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYLDN 327 K+ T + RPG D + K +GW +E N + W N Sbjct: 277 -KACGKTIAYQIAPRRPGDIAACYADPTHAKQSLGWHATHTLEDMANSSWHWQSTN 331 >gi|255014209|ref|ZP_05286335.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 2_1_7] Length = 364 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 23/246 (9%) Query: 4 IVTGGAGFIGSALCRYLVN---DL--KIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVD 58 ++TG G GS L +L++ D+ I+ +D +L L F D Sbjct: 6 LITGITGQDGSFLAEFLLDKGYDVHGTIRRSSVDYRERIAHLEGLPH------FHLHYAD 59 Query: 59 ICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 + D I +K QP+ I N AA+SHV S + EF T N+ T +L R+ + Sbjct: 60 LGDSMSILQVVKLVQPNEIYNLAAQSHVQVS-FDSPEF-TANVDATGVL----RVLEAVR 113 Query: 119 SQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI- 177 D + R Q ST E+YG +++ +E+ P++P SPY+ K ++V + Y + Sbjct: 114 HCDLIGKCRIYQASTSELYGKVEEVPQNENTPFHPYSPYAVAKQYGFWIVKEYREAYNMF 173 Query: 178 ---PVLLSNCSNNYGPYHFPEKLIPLAITRMIEGSHVFLY-GDGQNVRDWLYVEDHVRAL 233 +L ++ S G F + I LA R+ +G LY G+ ++RDW Y +D+V + Sbjct: 174 CCSGILFNHESERRGET-FVTRKITLAAARIAQGKQDKLYLGNLSSLRDWGYAKDYVECM 232 Query: 234 YLVLKK 239 +L+L++ Sbjct: 233 WLILQQ 238 >gi|6690131|gb|AAF23998.1| WbpP [Pseudomonas aeruginosa] Length = 341 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 94/340 (27%), Positives = 142/340 (41%), Gaps = 40/340 (11%) Query: 4 IVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLN-----SLKEISQSNLFSFLQVD 58 ++TG AG IGS L L+ L +V+ +D N SL Q + F F+Q D Sbjct: 20 LITGVAGSIGSNLLETLLK-LDQKVVGLDNFATGHQRNLDEVRSLASEKQWSNFKFIQGD 78 Query: 59 I-----CDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRL 113 I C+ C D +++ AA V RSI TNI G +L R Sbjct: 79 IRNLDDCNNACA-------GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR- 130 Query: 114 WWSCLSQDKKDQFRFLQISTDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGH 173 D K Q F ++ YG ED P SPY+ TK ++ + Sbjct: 131 -------DAKVQ-SFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSR 182 Query: 174 TYGIPVLLSNCSNNYGPYHFPE----KLIPLAITRMIEGSHVFLYGDGQNVRDWLYVEDH 229 YG + N +G P +IP + MI+G V++ GDG+ RD+ Y+E+ Sbjct: 183 CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242 Query: 230 VRALYLVLKKG--RIGERYNI--GGNNERKNIDIVFEIGFLLDALIPKSYSHTELIRFIE 285 V+A L G + YNI GG R +++ +F L D L S+ + + Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGG---RTSLNQLFFA--LRDGLAENGVSYHREPVYRD 297 Query: 286 DRPGHDRRYAIDSSKIKSEIGWFPQENMESGLNKTVCWYL 325 R G R D SK +G+ P+ ++ +G+ + WY+ Sbjct: 298 FREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYI 337 >gi|307290707|ref|ZP_07570612.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] gi|306498236|gb|EFM67748.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] Length = 310 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 51/333 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS L++ V+V+D L G+ +++ E + +F + DI Sbjct: 1 MSILVLGGAGYIGSHAVDQLISK-GYAVVVVDNL-LTGHRSAVHEQA-----TFYEGDIR 53 Query: 61 DRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCLSQ 120 D+ + S ++ + +++FAA S V S+ + N+ GT I LE + Sbjct: 54 DKAFLCSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQ-------- 105 Query: 121 DKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTYGI 177 +F I ST YG +E+ P NP +PY +K + ++ + YG+ Sbjct: 106 ----EFGVKHIVFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGM 161 Query: 178 P--------VLLSNCSNNYGPYHFPEKLIPLAITRMIEG--SHVFLYG------DGQNVR 221 V + + G H PE I I ++ G + + ++G DG +R Sbjct: 162 KYVALRYFNVAGAKKDASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIR 221 Query: 222 DWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSYSHT 278 D++Y+ED + A L LK G + +N+G NN + + +LDA + + Sbjct: 222 DYVYIEDLIAAHILALEYLKNGGESDVFNLGSNNG-------YSVKEMLDA--AREVTGQ 272 Query: 279 ELIRFIEDRPGHDRRYAIDSS-KIKSEIGWFPQ 310 E+ I R D I SS K K +GW P+ Sbjct: 273 EIPATIAPRRAGDPSTLIASSEKAKRVLGWQPE 305 >gi|306832690|ref|ZP_07465827.1| UDP-glucose 4-epimerase [Streptococcus bovis ATCC 700338] gi|304425146|gb|EFM28275.1| UDP-glucose 4-epimerase [Streptococcus bovis ATCC 700338] Length = 332 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 54/350 (15%) Query: 1 MRLIVTGGAGFIGSALCRYLVNDLKIQVLVIDKLTYAGNLNSLKEISQSNLFSFLQVDIC 60 M ++V GGAG+IGS + LV +V+V+D L G+ ++ + F Q D+ Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEKGDEEVVVVDSLV-TGHRAAVHPDA-----IFYQGDLA 54 Query: 61 DRECIRSALKEFQP--DAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSCL 118 D++ +R E P DA+++FAA S V S+ ++ N G LLE Sbjct: 55 DQDFMRKVFTE-NPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVM------- 106 Query: 119 SQDKKDQFRFLQI---STDEVYGSLDKGLFSEDMPYNPSSPYSATKASSDYLVLAWGHTY 175 ++F I ST YG D+ E P P +PY +K + ++ Y Sbjct: 107 -----NEFGVKHIVFSSTAATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDQAY 161 Query: 176 GI---PVLLSNCS-----NNYGPYHFPE-KLIPLAITRMIEG--SHVFLYG------DGQ 218 GI P+ N + + G H PE L+P+ I ++ +G + ++G DG Sbjct: 162 GIKFVPLRYFNVAGAKPDGSIGEDHGPETHLLPI-ILQVAQGVREKIMIFGNDYNTPDGT 220 Query: 219 NVRDWLYVEDHVRALYLV---LKKGRIGERYNIGGNNERKNIDIVFEIGFLLDALIPKSY 275 NVRD+++ D A L L++G +N+G + N+ I+ + IP Sbjct: 221 NVRDYVHPFDLADAHLLAVKYLREGNPSTAFNLGSSTGFSNLQILEAARKVTGKEIPAEL 280 Query: 276 SHTELIRFIEDRPGHDRRYAIDSSKIKSEIGWFPQ-ENMESGLNKTVCWY 324 + + RPG S K + +GW PQ +++E + W+ Sbjct: 281 A--------DRRPGDPDTLIASSDKAREVLGWKPQFDDIEKIIASAWAWH 322 >gi|229591110|ref|YP_002873229.1| putative GDP-mannose 4,6-dehydratase [Pseudomonas fluorescens SBW25] gi|229362976|emb|CAY49921.1| putative GDP-mannose 4,6-dehydratase [Pseudomonas fluorescens SBW25] Length = 373 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 10/188 (5%) Query: 58 DICDRECIRSALKEFQPDAIVNFAAESHVDRSILGADEFITTNIIGTFILLEETRLWWSC 117 D+ D + +++ QPD I N A+SHV S + + +GT +LE RL Sbjct: 64 DLADSSNLTRIIQQIQPDEIYNLGAQSHVAVSFDSPEYTADVDALGTLRILEAIRL---- 119 Query: 118 LSQDKKDQ