HHsearch alignment for GI: 254780921 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=99.96 E-value=5.1e-29 Score=182.55 Aligned_cols=255 Identities=17% Similarity=0.137 Sum_probs=179.8
Q ss_pred CEEEEECCCCHHHHHHHHHH-HCCCEEEEECHHH---------------CCCCCHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 94999978897889999999-6498599961367---------------0878999999999755998999786344543
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD---------------IDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~~---------------~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~ 64 (290)
T Consensus 1 M~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~Gv--daVi~~~~~~-~- 76 (319)
T CHL00194 1 MSLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGI--TAIIDASTSR-P- 76 (319)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCC--CEEEEECCCC-C-
T ss_conf 97999899858999999999968890899957867632342159679994278877899996599--6799945667-7-
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 22332210242012221100011223333-33445532111357554421111222211101245666653101222322
Q gi|254780921|r 65 KAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 (290)
Q Consensus 65 ~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~~~~~~~ 143 (290)
T Consensus 77 ---~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~l----ga------~~---~~~~p~~~~K~~~E~~L~~Sgl~~T 140 (319)
T CHL00194 77 ---SDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSIL----NA------EQ---YPQVPLMKIKSDIEEKLKQSGINYT 140 (319)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC----CC------CC---CCCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf ---88620889889889999999998499889996135----66------66---8875677879999999986799859
Q ss_pred CCCCCCCEECCCCCCCCEEECCCCCCCCEEECC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCH
Q ss_conf 355542000368632000201124665215304-5545445223689999999984420244334431376238666788
Q gi|254780921|r 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVC-DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 (290)
Q Consensus 144 IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~-d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~Giyn~~~~~~~~s~ 222 (290)
T Consensus 141 IlRPs~F~q~----l~~~~a~pi~~~~~v~~~~~~~~ia~I~~~DVA~~~a~aL~~~~~-----~gk~y~L~GP-~a~T~ 210 (319)
T CHL00194 141 IFRLAGFFQG----LISQYAIPILDSQTIWITGESTPIAYIDTQDAAKFALKSLSLPET-----KNKTFPLVGP-KSWNS 210 (319)
T ss_pred EECCHHHHHH----HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC-----CCCEEEEECC-CCCCH
T ss_conf 9847399998----899876776307857766998752887799999999999589775-----8989995498-63899
Q ss_pred HHHHHHHHHHHHHHCCCCHHEEECCHHH------------HC-CCCCCC---------CCCCCCHHHHHHHHCCCCC---
Q ss_conf 9999999999997279800057628588------------08-768997---------5110086899996178999---
Q gi|254780921|r 223 ADFAEYIFWESAERGGPYSKVYRIFTKQ------------YP-TKAHRP---------AYSCLDCSKLANTHNIRIS--- 277 (290)
Q Consensus 223 ~e~a~~I~~~~~~~~~~~~~i~~~~~~~------------~~-~~a~RP---------~~~~Ld~~K~~~~lg~~~~--- 277 (290)
T Consensus 211 ~EI----a~l~~~~~Gk~~~i~~vP~~~~~~~~~~~~~f~~~~~i~~rl~f~ev~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T CHL00194 211 SEI----ISLCEQLSGQKAKVTRIPLFLLKLLRRITGFFEWTWNISDRLAFAEVLSEGNNFSASMADVYKIFKIDSNEIT 286 (319)
T ss_pred HHH----HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 999----9999998599987786898999999999987233425999999999965598657888999877188922222
Q ss_pred CHHHHHHHHHHH
Q ss_conf 989999999971
Q gi|254780921|r 278 TWKEGVRNILVN 289 (290)
Q Consensus 278 ~~~e~i~~~i~~ 289 (290)
T Consensus 287 ~le~y~~ey~~~ 298 (319)
T CHL00194 287 SLEDYLQEYFGR 298 (319)
T ss_pred CHHHHHHHHHHH
T ss_conf 189999999999