HHsearch alignment for GI: 254780921 and conserved domain: COG1091
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=488.61 Aligned_cols=280 Identities=43% Similarity=0.729 Sum_probs=262.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 94999978897889999999649859996136708789999999997559989997863445432233221024201222
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~~~~v~~~~r~~~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~~~e~~~~~~~~~Nv~~ 80 (290)
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~ 80 (281)
T COG1091 1 MKILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATG 80 (281)
T ss_pred CCEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 95899769876799999971778439951576555568589999998619998998732036541338989977767799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 11000112233333344553211135755442111122221110124566665310122232235554200036863200
Q gi|254780921|r 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 (290)
Q Consensus 81 ~~~l~~~~~~~~~~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~~~~~~~IlR~~~vyG~~~~~~v~ 160 (290)
T Consensus 81 ~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~ 160 (281)
T COG1091 81 AENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVK 160 (281)
T ss_pred HHHHHHHHHHHCCEEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHH
T ss_conf 99999999971976999634457438989888778999970245477897899999739987999856554588877899
Q ss_pred EEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 02011246652153045545445223689999999984420244334431376238666788999999999999727980
Q gi|254780921|r 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 (290)
Q Consensus 161 ~~l~~~~~~~~i~~~~d~~~~p~~v~D~a~~i~~~~~~~~~~~~~~~~Giyn~~~~~~~~s~~e~a~~I~~~~~~~~~~~ 240 (290)
T Consensus 161 tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~------~~~~yH~~~~-g~~Swydfa~~I~~~~~~~~--- 230 (281)
T COG1091 161 TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK------EGGVYHLVNS-GECSWYEFAKAIFEEAGVDG--- 230 (281)
T ss_pred HHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHHHHHCCC------CCCEEEEECC-CCCCHHHHHHHHHHHHCCCC---
T ss_conf 9999850599269979845387469999999999983455------5867998079-74119999999999838886---
Q ss_pred HHEEECCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 00576285880876899751100868999961789999899999999719
Q gi|254780921|r 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 (290)
Q Consensus 241 ~~i~~~~~~~~~~~a~RP~~~~Ld~~K~~~~lg~~~~~~~e~i~~~i~~l 290 (290)
T Consensus 231 ~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~~~~~~~w~~~l~~~~~~~ 280 (281)
T COG1091 231 EVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDEL 280 (281)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 41455562236766789755542528899974889825999999997331