HHsearch alignment for GI: 254780921 and conserved domain: KOG1200

Probab=98.56  E-value=2e-07  Score=61.08  Aligned_cols=182  Identities=16%  Similarity=0.176  Sum_probs=101.0

Q ss_pred             EEEECCCCHHHHHHHHHH-HCCCEEEEECHH--------------------HCCCCCHHHHHHHHHHC-----CCCEEEE
Q ss_conf             999978897889999999-649859996136--------------------70878999999999755-----9989997
Q gi|254780921|r    3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRP--------------------DIDLLKPKDFASFFLSF-----SPDVIIN   56 (290)
Q Consensus         3 iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~--------------------~~D~~~~~~~~~~l~~~-----~pd~Vih   56 (290)
T Consensus        17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVn   96 (256)
T KOG1200          17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVN   96 (256)
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             48734875077999999974696799750322447999862688776523530467578899999999984299728997


Q ss_pred             CCCCCCCC----CCCCCCCEEEEECCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf             86344543----223322102420122211000112233-------33334455321113575-5442111122221110
Q gi|254780921|r   57 PAAYTAVD----KAEDEPEIAFSINAEGAGAIAKAADSI-------GIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIY  124 (290)
Q Consensus        57 ~Aa~~~~~----~~e~~~~~~~~~Nv~~~~~l~~~~~~~-------~~~~I~iSS~~Vy~g~~-~~p~~E~d~~~P~~~Y  124 (290)
T Consensus        97 cAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs----K~GvI  172 (256)
T KOG1200          97 CAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS----KGGVI  172 (256)
T ss_pred             CCCCCCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHH----CCCEE
T ss_conf             57646530201324888888997512136788899999999716798438864452102456552234453----27555


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             124566665310122232235554200036863200020112466521530455454452236899999999
Q gi|254780921|r  125 GKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA  196 (290)
Q Consensus       125 g~sK~~~E~~v~~~~~~~~IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~d~~~~p~~v~D~a~~i~~~~  196 (290)
T Consensus       173 gftktaArEla~kn-IrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr----~G---~~EevA~~V~fLA  236 (256)
T KOG1200         173 GFTKTAARELARKN-IRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGR----LG---EAEEVANLVLFLA  236 (256)
T ss_pred             EEEHHHHHHHHHCC-CEEEEECCCCCCCHHHHHCCHHHHHHHHCCCCCCC----CC---CHHHHHHHHHHHH
T ss_conf             30098899886548-24767614311681254438789999975587644----58---8899878999881