HHsearch alignment for GI: 254780921 and conserved domain: PRK05086

Probab=96.92  E-value=0.00063  Score=41.31  Aligned_cols=95  Identities=20%  Similarity=0.170  Sum_probs=58.3

Q ss_pred             CEEEEECCCCHHHHHHHHHHHC----CCEEEEECHHH------CCCCCH-----------HHHHHHHHHCCCCEEEECCC
Q ss_conf             9499997889788999999964----98599961367------087899-----------99999997559989997863
Q gi|254780921|r    1 MKCLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD------IDLLKP-----------KDFASFFLSFSPDVIINPAA   59 (290)
Q Consensus         1 MkiLVtG~~G~iG~~l~~~l~~----~~~v~~~~r~~------~D~~~~-----------~~~~~~l~~~~pd~Vih~Aa   59 (290)
T Consensus         1 mKV~IiGA~G~VG~s~A~~l~~~~~~~~el~L~Di~~~~~G~alDL~h~~~~~~~~~~~~~~~~~~l~~a--diVvitAG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGA--DVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEECCCHHHHHCCC--CEEEECCC
T ss_conf             9899998998699999999982898777499975888861056565478754665346169867871799--99998789


Q ss_pred             CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC--CCCCCC
Q ss_conf             4454322332210242012221100011223333--334455
Q gi|254780921|r   60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYIS   99 (290)
Q Consensus        60 ~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~I~iS   99 (290)
T Consensus        79 ~~rkp--G~tR~dLl~~Na~I~~~i~~~I~~~~p~aiiivvs  118 (312)
T PRK05086         79 VARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             89985--89889999987899999999887208971899954