HHsearch alignment for GI: 254780921 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=95.43 E-value=0.062 Score=30.10 Aligned_cols=134 Identities=20% Similarity=0.180 Sum_probs=68.4
Q ss_pred EEEEECCCCH-HHH---------HHHHHH-HCCCEEEEECHH------HCCCC--------CHHHHHHHHHHCCCCEEE-
Q ss_conf 4999978897-889---------999999-649859996136------70878--------999999999755998999-
Q gi|254780921|r 2 KCLVIGNNGQ-IAQ---------SLSSMC-VQDVEIIRVGRP------DIDLL--------KPKDFASFFLSFSPDVII- 55 (290)
Q Consensus 2 kiLVtG~~G~-iG~---------~l~~~l-~~~~~v~~~~r~------~~D~~--------~~~~~~~~l~~~~pd~Vi- 55 (290)
T Consensus 555 kvlvlGsGp~rIGqgiEFDY~~v~a~~alk~~G~~~imIN~NPETVSTD~d~sDrLYFEplt~E~V~~I~~~E~p~gvi~ 634 (1063)
T PRK05294 555 KVMILGGGPNRIGQGIEFDYCCVHAALALREAGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIIEKEKPKGVIV 634 (1063)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEE
T ss_conf 37996577732044423006799999999965981589537811111565667614543688999999999758987999
Q ss_pred ECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC---CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 7863445432233221024201222110001122333333445532111357-554---421111222211101245666
Q gi|254780921|r 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT---PIDEFSPTNPLNIYGKSKLAG 131 (290)
Q Consensus 56 h~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy~g~-~~~---p~~E~d~~~P~~~Yg~sK~~~ 131 (290)
T Consensus 635 qfGGQt~-------------------~nla~~L~~~g~~ilGts~~~Id~aEDR~~F~~~l~~l~i~qp~~~~a~s~~ea 695 (1063)
T PRK05294 635 QFGGQTP-------------------LKLAKALEAAGVPILGTSPDAIDLAEDRERFQKLLEKLGIKQPPNGTATSVEEA 695 (1063)
T ss_pred ECCCCCH-------------------HHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHH
T ss_conf 7388367-------------------899999998799477788788787875888999998659999997076689999
Q ss_pred HHHHCCCCCCCCCCCCCCCEECCC
Q ss_conf 653101222322355542000368
Q gi|254780921|r 132 EEKVASYTNNYVILRTAWVYSIFG 155 (290)
Q Consensus 132 E~~v~~~~~~~~IlR~~~vyG~~~ 155 (290)
T Consensus 696 ~~~a~~iG-yPvlvRPSyVLGG~~ 718 (1063)
T PRK05294 696 LEIAEEIG-YPVLVRPSYVLGGRA 718 (1063)
T ss_pred HHHHHHCC-CCEEECCCCCCCCCC
T ss_conf 99998649-866843431025771