HHsearch alignment for GI: 254780921 and conserved domain: PRK05599
>PRK05599 hypothetical protein; Provisional.
Probab=99.40 E-value=9.3e-13 Score=91.03 Aligned_cols=169 Identities=12% Similarity=0.166 Sum_probs=107.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEECHHH----------------------CCCCCHHHHHHHHHHC-----CCCE
Q ss_conf 949999788978899999996498599961367----------------------0878999999999755-----9989
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------------------IDLLKPKDFASFFLSF-----SPDV 53 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~~~~v~~~~r~~----------------------~D~~~~~~~~~~l~~~-----~pd~ 53 (290)
T Consensus 1 MtvlITGASsGIG~a~A~~lA~G~~vvl~~R~~e~l~~l~~~l~~~g~~~v~~~~~Dvtd~~~~~~~v~~~~~~~g~id~ 80 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLAHGEDVVLAARRPEAAGGLAEDLRQLGATSVHVLSFDATDLDSHRELVKQTQELAGEISL 80 (246)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 98999888689999999999859949999999999999999998625971899728999999999999999986198439
Q ss_pred EEECCCCCCC-CCCCCCC---CEEEEECCCCCCCCCCCCC----C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9978634454-3223322---1024201222110001122----3--333334455321113575544211112222111
Q gi|254780921|r 54 IINPAAYTAV-DKAEDEP---EIAFSINAEGAGAIAKAAD----S--IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 (290)
Q Consensus 54 Vih~Aa~~~~-~~~e~~~---~~~~~~Nv~~~~~l~~~~~----~--~~~~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~ 123 (290)
T Consensus 81 lv~naGi~~~~~~~~~d~~~~~~~~~vN~~~~~~~~~~~~~~~~~~~~~G~Iv~iSSvag~---~~~~~--------~~~ 149 (246)
T PRK05599 81 AVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTTPSTIVAFSSIAGW---RARRA--------NYV 149 (246)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHC---CCCCC--------CCH
T ss_conf 9987766787320118999999999988699999999999999854699479999676757---87888--------850
Q ss_pred CHHHHHHHHHHHCCCCC-------CCCCCCCCCCEECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01245666653101222-------32235554200036863200020112466521530455454452236899999999
Q gi|254780921|r 124 YGKSKLAGEEKVASYTN-------NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 (290)
Q Consensus 124 Yg~sK~~~E~~v~~~~~-------~~~IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~d~~~~p~~v~D~a~~i~~~~ 196 (290)
T Consensus 150 Y~ASKaal~~~~~~L~~el~~~gI~V~~v~PG~V~T~--------mt~~~-~~~p~~---------~spe~~A~~i~~~i 211 (246)
T PRK05599 150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS--------MTTGM-KPAPMS---------VYPRDVAAAVVSAI 211 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC--------CCCCC-CCCCCC---------CCHHHHHHHHHHHH
T ss_conf 8699999999999999995377968999844988362--------00799-989875---------89999999999999
Q ss_pred HH
Q ss_conf 84
Q gi|254780921|r 197 HN 198 (290)
Q Consensus 197 ~~ 198 (290)
T Consensus 212 ~~ 213 (246)
T PRK05599 212 TS 213 (246)
T ss_pred HH
T ss_conf 81