HHsearch alignment for GI: 254780921 and conserved domain: PRK09009

>PRK09009 C factor cell-cell signaling protein; Provisional.
Probab=99.46  E-value=2.9e-13  Score=93.87  Aligned_cols=175  Identities=15%  Similarity=0.116  Sum_probs=104.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHC-CC--EEEEECHH-------------HCCCCCHHHHHHHHHHC-CCCEEEECCCCCC-
Q ss_conf             9499997889788999999964-98--59996136-------------70878999999999755-9989997863445-
Q gi|254780921|r    1 MKCLVIGNNGQIAQSLSSMCVQ-DV--EIIRVGRP-------------DIDLLKPKDFASFFLSF-SPDVIINPAAYTA-   62 (290)
Q Consensus         1 MkiLVtG~~G~iG~~l~~~l~~-~~--~v~~~~r~-------------~~D~~~~~~~~~~l~~~-~pd~Vih~Aa~~~-   62 (290)
T Consensus         1 mnVLITGas~GIG~aia~~l~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~Dvt~~~~i~~~~~~~~~iD~linnAGi~~~   80 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLETYPDATVHATYRHHKPDFRHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHT   80 (235)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             97999755639999999999856998099997377654445798389987479999999999870877899976752446


Q ss_pred             ----CCC--CCCC---CCEEEEECCCCCCCCCCCC----CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             ----432--2332---2102420122211000112----233-3333445532111357554421111222211101245
Q gi|254780921|r   63 ----VDK--AEDE---PEIAFSINAEGAGAIAKAA----DSI-GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK  128 (290)
Q Consensus        63 ----~~~--~e~~---~~~~~~~Nv~~~~~l~~~~----~~~-~~~~I~iSS~~Vy~g~~~~p~~E~d~~~P~~~Yg~sK  128 (290)
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~l~~~~~~~iv~isS~~---g~i~-----~~~~~g~~~Y~aSK  152 (235)
T PRK09009         81 QDKGPEKSLQSLDSDFFLQNITLNTLPSLLLAKHFTPLLKQSESARFAVISAKV---GSIS-----DNRLGGWYSYRASK  152 (235)
T ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCC-----CCCCCCCHHHHHHH
T ss_conf             777764686778999999999886199999999999999860787640122234---1577-----88888623669999


Q ss_pred             HHHHHHHCCCCCC------CC---CCCCCCCEECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             6666531012223------22---3555420003686320002011246652153045545445223689999999984
Q gi|254780921|r  129 LAGEEKVASYTNN------YV---ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN  198 (290)
Q Consensus       129 ~~~E~~v~~~~~~------~~---IlR~~~vyG~~~~~~v~~~l~~~~~~~~i~~~~d~~~~p~~v~D~a~~i~~~~~~  198 (290)
T Consensus       153 aAl~~lt~~la~E~~~~~~~i~V~~i~PG~v~T~--------m~~~~~~~~p~-------~r~~~PeeiA~~i~~L~s~  216 (235)
T PRK09009        153 AALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTP--------LSKPFQQNVPK-------GKLFTPEYVAQCLLGIIAN  216 (235)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC--------CCCHHHHCCCC-------CCCCCHHHHHHHHHHHHCC
T ss_conf             9999999999999764269968999814865671--------23067857998-------8882999999999999716