HHsearch alignment for GI: 254780921 and conserved domain: PRK10084
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional.
Probab=100.00 E-value=0 Score=322.03 Aligned_cols=277 Identities=19% Similarity=0.230 Sum_probs=212.6
Q ss_pred CEEEEECCCCHHHHHHHHHH-HCCCE-EEEECH---------------------HHCCCCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 94999978897889999999-64985-999613---------------------67087899999999975599899978
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMC-VQDVE-IIRVGR---------------------PDIDLLKPKDFASFFLSFSPDVIINP 57 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l-~~~~~-v~~~~r---------------------~~~D~~~~~~~~~~l~~~~pd~Vih~ 57 (290)
T Consensus 1 MkILVTGg~GFIGs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~~D~ViHl 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 97999751008999999999977998899984798767788888763089717998567899999999997399999997
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC---------CC-CCCCCCCCCCCCC---------CCCCC-CCCCCC
Q ss_conf 6344543223322102420122211000112233---------33-3344553211135---------75544-211112
Q gi|254780921|r 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---------GI-PCIYISTDYVFDG---------LSRTP-IDEFSP 117 (290)
Q Consensus 58 Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~---------~~-~~I~iSS~~Vy~g---------~~~~p-~~E~d~ 117 (290)
T Consensus 81 AA~~~~~~s~~~p~~~~~~Nv~gt~nllea~~~~~~~l~~~~~~~~rfv~~SS~~vYG~~~~p~~~~~~~~~p~~~e~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSVELPLFTETTA 160 (352)
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73466561330967865223786999999999986432001354058887101403468888633356655776557899
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCC----CCCCCCCCCCEECCCC--CCCCEEECCCCCCCCEEECCC--CCCCCCCHHHHH
Q ss_conf 22211101245666653101222----3223555420003686--320002011246652153045--545445223689
Q gi|254780921|r 118 TNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--NFLLSMLRLAKERREISVVCD--QFGTPTSALQIA 189 (290)
Q Consensus 118 ~~P~~~Yg~sK~~~E~~v~~~~~----~~~IlR~~~vyG~~~~--~~v~~~l~~~~~~~~i~~~~d--~~~~p~~v~D~a 189 (290)
T Consensus 161 ~~p~~~Y~~sK~~~E~l~~~~~~~~gl~~~i~R~~nvyGP~~~~~~~i~~~i~~~l~g~~i~i~G~G~~~Rdf~yV~D~v 240 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHH
T ss_conf 99999899999999999998776515876998527530869996036999999998097368817998567129759999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECCHHHHCCCCCCC---CCCCCCHH
Q ss_conf 999999984420244334431376238666788999999999999727980005762858808768997---51100868
Q gi|254780921|r 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCS 266 (290)
Q Consensus 190 ~~i~~~~~~~~~~~~~~~~Giyn~~~~~~~~s~~e~a~~I~~~~~~~~~~~~~i~~~~~~~~~~~a~RP---~~~~Ld~~ 266 (290)
T Consensus 241 ~a~~~~~~~~~------~g~~yNig~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~----~~i~~~~~rp~~~~~~~~d~s 309 (352)
T PRK10084 241 RALYKVVTEGK------AGETYNIGGH-NEKKNLDVVLTICDLLDEIVPKATSYR----EQITYVADRPGHDRRYAIDAS 309 (352)
T ss_pred HHHHHHHHCCC------CCCEEEECCC-CCCCHHHHHHHHHHHHHHHHHHCCCCC----CCCEECCCCCCCCCEEEECHH
T ss_conf 99999986699------9995998999-976389999999999998741216853----232246999999754313899
Q ss_pred HHHHHHCCCCC-CHHHHHHHHHH
Q ss_conf 99996178999-98999999997
Q gi|254780921|r 267 KLANTHNIRIS-TWKEGVRNILV 288 (290)
Q Consensus 267 K~~~~lg~~~~-~~~e~i~~~i~ 288 (290)
T Consensus 310 k~~~~LGw~P~~sl~eGl~~ti~ 332 (352)
T PRK10084 310 KISRELGWKPQETFESGIRKTVE 332 (352)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99998499869999999999999